BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038404
(287 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/287 (79%), Positives = 260/287 (90%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KAK VNKALDE + L++P KIH+AMRYSLLAGGKRVRPVLCIA+CELVGGDE++AMP
Sbjct: 86 MATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMP 145
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK+FGE+TAILAGDALLS +FEHVA
Sbjct: 146 AACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVARS 205
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +SPDRVVRAIAELGSAVGSEGLVAG+I+DIDSEGKDVS+++LE IH+HKTAKLLEA+
Sbjct: 206 TKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIHKTAKLLEAS 265
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GG + VERVRKYARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DKATY
Sbjct: 266 VVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLITDKATY 325
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMGI+ ARK A L+ QA +ELAYF+ A+AAPLYH A YIASRQ+
Sbjct: 326 PKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPLYHFANYIASRQN 372
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/287 (76%), Positives = 258/287 (89%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA +VNKALDE + ++ P K+HEAMRYSLLAGGKRVRP+LC+ASCE+VGGDES A+P
Sbjct: 79 MVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIP 138
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSLVHDDLPCMDNDD RRGKPTNHKVFGE+TA+LAGDALLSLAFEHVA K
Sbjct: 139 AACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSLAFEHVATK 198
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++P RVV+AI ELGSAVGSEGLVAG+I+D+ SEGK VSL ELE IH HKTAKLLEAA
Sbjct: 199 TQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHQHKTAKLLEAA 258
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGGN ++VER+R YARCIGLLFQVVDDILDVTKSS ELGKTAGKDL++DKATY
Sbjct: 259 VVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKDLITDKATY 318
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMG+E AR++A +L+A+A EL+YF+ A+AAPLYH+A YIA+RQ+
Sbjct: 319 PKLMGLEKARQYAGELMAKAMNELSYFDSAKAAPLYHIASYIANRQN 365
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/288 (78%), Positives = 258/288 (89%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + K++NKALDE V ++ PA IHEAMRYSLLAGGKRVRPVLCIASCELVGG ES AMP
Sbjct: 80 MKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GE+TAILAGDALLSLAFEHVA
Sbjct: 140 MACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADA 199
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++P RVVRAIAELGSAVGS+GLVAG+IMDI ++GKDV LN+LE IH+HKT+KLLEA+
Sbjct: 200 TDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKTSKLLEAS 259
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGGN+IEVER+RKYARCIGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK TY
Sbjct: 260 VVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTY 319
Query: 241 PKLMGIENARKFACDLLAQATEELAYF-EVARAAPLYHLAYYIASRQH 287
PKLMG+E A++FA +L+AQA EEL+YF AR APLYHLA YIA RQ+
Sbjct: 320 PKLMGLERAKRFATELVAQAEEELSYFGSSARVAPLYHLAKYIAYRQN 367
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/287 (75%), Positives = 257/287 (89%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA +VNKALDE + ++ P K+HEAMRYSLLAGGKRVRP+LC+ASCE+VGGDES A+P
Sbjct: 79 MVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIP 138
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSLVHDDLPCMDNDD RRGKPTNHK+FGE+TA+LAGDALLSLAFEHVA K
Sbjct: 139 AACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGDALLSLAFEHVATK 198
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ + P RVV+AI ELGSAVGSEGLVAG+I+D+ SEGK VSL ELE IH HKT+KLLEAA
Sbjct: 199 TQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHHHKTSKLLEAA 258
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGGN ++VER+R YARCIGLLFQVVDDILDVTKSS ELGKTAGKDL++DKATY
Sbjct: 259 VVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKDLITDKATY 318
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMG+E AR++A +L+A+A EL+YF+ A+AAPLYH+A YIA+RQ+
Sbjct: 319 PKLMGLEKARQYAGELMAKAMNELSYFDYAKAAPLYHIASYIANRQN 365
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/288 (78%), Positives = 256/288 (88%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + K++NKALDE V ++ PA IHEAMRYSLLAGGKRVRPVLCIASCELVGG ES AMP
Sbjct: 80 MKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GE+TAILAGDALLSLAFEHVA
Sbjct: 140 MACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADA 199
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++P RVVRAIAELGSAVGS+GLVAG+IMDI ++GKDV LN+LE IH+HKT+KLLEA+
Sbjct: 200 TDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKTSKLLEAS 259
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGGN+IEVER+RKYARCIGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK TY
Sbjct: 260 VVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTY 319
Query: 241 PKLMGIENARKFACDLLAQATEELAYF-EVARAAPLYHLAYYIASRQH 287
PKLMG+E A++FA +L+AQA EEL+YF R APLYHLA YIA R +
Sbjct: 320 PKLMGLERAKRFATELVAQAEEELSYFGSSTRVAPLYHLAKYIAYRHN 367
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/287 (77%), Positives = 253/287 (88%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA +VNKALDE V L+HP KI+EAMRYSLLAGGKRVRP+LCIASCELVGGDE AMP
Sbjct: 79 MINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGLAMP 138
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLPCMDNDD RRGKPT+HK+FGEDTA+LAGDALLSLAFEHVA
Sbjct: 139 AACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFEHVARN 198
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +S DRVV+AIAELGS VGS+GLVAG+I+DIDSEGK+VSL+ LE IH+HKTAKLLEAA
Sbjct: 199 TKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTAKLLEAA 258
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GG + VER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL SDKATY
Sbjct: 259 VVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKATY 318
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMGI+ A+KFA L+ +A + LA+F+ +AAPLYH A YIA+RQ+
Sbjct: 319 PKLMGIDEAKKFAAQLVDEANQGLAFFDHVKAAPLYHFANYIATRQN 365
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/287 (75%), Positives = 255/287 (88%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA +VNKALD+ + ++ P KIHEAMRYSLLAGGKRVRP+LC+ASCE+VGGDES A+P
Sbjct: 79 MKMKAIKVNKALDDAIPMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIP 138
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDNDD RRGKPT+HK FGEDTA+L GDALLSLAFEHVA+K
Sbjct: 139 AACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSLAFEHVASK 198
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +++P RVV+A+ ELGSAVGS+GLVAG+I+DI SEGK VSL ELE IH HKT KLLEAA
Sbjct: 199 TKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHNHKTGKLLEAA 258
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG IIGGGN IEVER+R YARC+GLLFQVVDDILDVTKSS+ELGKTAGKDLV+DKATY
Sbjct: 259 VVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGKTAGKDLVTDKATY 318
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMG+E AR+ A +L+A+A +EL+YF+ A+AAPLYH A YIA RQ+
Sbjct: 319 PKLMGLEKARELAGELVAKAMDELSYFDAAKAAPLYHFANYIAHRQN 365
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/287 (75%), Positives = 252/287 (87%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD+ V L HP KIH AMRYSLLAGGKRVRP+LCIA+CELVGGDE++AMP
Sbjct: 84 MVLKANNVNEALDKAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIAACELVGGDEAAAMP 143
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK+FGE+TAILAGDA+LSLAFEH+A
Sbjct: 144 SACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARA 203
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +SP+RVVR I ELGSAVGSEGLVAG+I+D+ SEGK+V++ +LE IH+HKTAKLLEAA
Sbjct: 204 TKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAA 263
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I GG + +ERVRKYARCIGLLFQV+DDILDVTKSS+ELGKTAGKDLVSDKATY
Sbjct: 264 VVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELGKTAGKDLVSDKATY 323
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+GI+ ARK A L+ +A +ELAYF+ A+AAPLYH A YIASRQ+
Sbjct: 324 PKLLGIDEARKLAAKLVDEANQELAYFDSAKAAPLYHFANYIASRQN 370
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/287 (75%), Positives = 249/287 (86%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M A+RVN+ALD++V LRHP KIHEAMRYSLLAGGKRVRP+LCIASCELVGGD +A P
Sbjct: 73 MAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGGDPVAAHP 132
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEMIHTMSL+HDDLPCMDNDDFRRG PTNHK FGE+TA+LAGDALLSLAFEHVA +
Sbjct: 133 IACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDALLSLAFEHVATR 192
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
ST +S DRVVR IAELG VGS+GLV G+I+DI S GK + L+ELE IHLHKTA LLEA+
Sbjct: 193 STGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIHLHKTAILLEAS 252
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGG ++ER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DKATY
Sbjct: 253 VVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGKTAGKDLATDKATY 312
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKLMGI+ A++FA L+AQA +EL Y++ A+AAPLYH A YIA RQ+
Sbjct: 313 PKLMGIDKAKEFADALVAQAHKELDYYDFAKAAPLYHFADYIAYRQN 359
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/286 (73%), Positives = 247/286 (86%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +K K+VN+AL+E V L+HP KIHEAMRYSLL GKR+ P+LCIASCELVGGDE AMP
Sbjct: 28 MLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDEELAMP 87
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEM+H MSL+HDDLPCMDNDD RRGKPTNHKVFGE AILAGDALLSLAFEH+A+K
Sbjct: 88 LACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGDALLSLAFEHIASK 147
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +SPD VVRAIAELGSA+GS G+VAG+I+DIDSEGK+VS+ LE IH+HKTAKLLEA+
Sbjct: 148 TKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEYIHVHKTAKLLEAS 207
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG I+GG + +ER+RKYAR IGLL+QVVDDILD TKSS+ELGKTAGKDL S+KATY
Sbjct: 208 AVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGKTAGKDLASNKATY 267
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
PKLMGI+ A+KFA +L+ QA +E+A F+ A+A PL+HLA YIA RQ
Sbjct: 268 PKLMGIDEAKKFAAELVEQAKKEIASFDSAKAVPLFHLADYIARRQ 313
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/287 (75%), Positives = 251/287 (87%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K +VNKALDE V L+HP KIHEAMRYSLLAGGKRVRP+LCIASCELVGGDE AMP
Sbjct: 1 MIQKGNQVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLPCMDNDD RRG PT+HKVFGEDTA+LAGDALL+LAFEHVA
Sbjct: 61 TACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARN 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +S DRVV+A+AELGSAVGS+GLVAG+++DI+SEGK+VSL+ LE IH+HKTAKLLEAA
Sbjct: 121 TKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAA 180
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GG + VER+RKYAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL SDKATY
Sbjct: 181 VVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATY 240
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+GI+ A+KFA L QA +EL +++ +AAPLYHLA YIASRQ+
Sbjct: 241 PKLIGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIASRQN 287
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/287 (74%), Positives = 255/287 (88%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKAK+VN ALD+ V L++P KIH+AMRYSLLAGGKRVRPVLC+ASCELVGG+E++A+P
Sbjct: 60 MASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGGKRVRPVLCLASCELVGGEEAAAVP 119
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEMIHTMSL+HDDLPCMDNDD RRG+PT HK FGE+TA+LAGDALL+LAFEHVAAK
Sbjct: 120 MACALEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEFGEETAVLAGDALLALAFEHVAAK 179
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ + RVV+AI ELGSAVGSEGLVAG+I+D+ SEGK +SL ELE IH+HKT+KLLEAA
Sbjct: 180 TRNVDERRVVQAIVELGSAVGSEGLVAGQIVDLSSEGKLLSLGELEYIHVHKTSKLLEAA 239
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GGG +VE +RKYARC+GLLFQVVDDILDVTK+S+ELGKTAGKDLV+DKATY
Sbjct: 240 VVCGAIMGGGGGAQVEALRKYARCVGLLFQVVDDILDVTKTSEELGKTAGKDLVTDKATY 299
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P+LMG+ A+ FA DL A A +EL+YF+ +RAAPLYHLA YIASRQ+
Sbjct: 300 PRLMGLRKAKDFAADLAAMAVQELSYFDPSRAAPLYHLAQYIASRQN 346
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/288 (70%), Positives = 244/288 (84%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA VN+ALD + LR P KIH+AMRYSLLAGGKRVRPVLCIA+CELVGG E++A+P
Sbjct: 68 MIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCIAACELVGGTEATAIP 127
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGDALL+ AFEHVAA
Sbjct: 128 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHVAAS 187
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP RVVRAI EL ++G+EGLVAG+++DIDSEG +V L LE IH+HKTA LLEA
Sbjct: 188 TEGVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGLETLEFIHVHKTAALLEA 247
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG+ EVE++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 248 AVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVT 307
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GI+ +++FA +LL A E+L+ F+ +AAPL+ L YIA RQ+
Sbjct: 308 YPKLLGIDKSKEFAQELLKDAKEQLSGFDPPKAAPLFALTNYIAYRQN 355
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/288 (70%), Positives = 238/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VNKALD+ V LR P KIHEAMRYSLLAGGKRVRPVLC+A+CELVGG+E++AMP
Sbjct: 80 MVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGEEATAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+AA
Sbjct: 140 AACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAAS 199
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ SP R+VRAI EL ++GSEGLVAG+++DI+SEG DV L LE IH+HKTA LLE
Sbjct: 200 TRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHVHKTAALLEG 259
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 260 AVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 319
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE ++ FA L A ++L F+ +AAPL LA YIA RQ+
Sbjct: 320 YPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQN 367
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/288 (70%), Positives = 240/288 (83%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA RVNKALD+ V LR P K+HEAMRYSLLAGGKRVRPVLC+A+CELVGG E AMP
Sbjct: 83 MIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMP 142
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 143 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRAI EL ++GSEGLVAG+++DI+SEG DV L +LE IHLHKTA LLE
Sbjct: 203 TAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLHKTAALLEG 262
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG+ +VE++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 263 AVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 322
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +++FA L A E+L+ F++ ++APL LA YIA RQ+
Sbjct: 323 YPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQN 370
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/287 (69%), Positives = 238/287 (82%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD+ V +R P KIHE+MRYSLLAGGKRVRP+LC+ASCELVGGD+ SAMP
Sbjct: 59 MVQKANTVNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNH V+GE+ A+LAGDALLS AFEHVA
Sbjct: 119 AACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATA 178
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++S +R+VRAI EL +GSEGLVAG+++DI SEG DV L LE IHLHKTA LLE +
Sbjct: 179 TKDVSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGS 238
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+GGG+ +EVER+RK+ R IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK TY
Sbjct: 239 VVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTY 298
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+GIE +R+FA L +A E+L F++ +AAPL LA YIA R +
Sbjct: 299 PKLLGIEKSREFAEKLNKEAQEQLKEFDIRKAAPLIALANYIAYRDN 345
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ SKA VN+ALD VQLR+P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG E AMP
Sbjct: 94 LLSKAMAVNEALDRAVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKLAMP 153
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNHKVFGE TA+LAGDALLS AFEH+A +
Sbjct: 154 TACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVS 213
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
S + DR++R ++ELG +GS+GLV G++ DI SEG V L+ LE IH+HKTA LLE
Sbjct: 214 TSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHKTAVLLE 273
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VVCG II G + E+ERV++YAR +GLLFQVVDDILDVTKSSKELGKTAGKDL+SDKA
Sbjct: 274 CSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLISDKA 333
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +LL +A E L+ F+ +AAPL LA YIA RQ+
Sbjct: 334 TYPKLMGLEKAKQFAVELLDRAKENLSCFDPMKAAPLLGLADYIAFRQN 382
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/292 (69%), Positives = 242/292 (82%), Gaps = 5/292 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +KA+ VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES+AMP
Sbjct: 80 IITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS AFEH+A+
Sbjct: 140 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASA 199
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAK 175
++ +SP RVVRA+ EL A+G+EGLVAG+++DI SEG DV L LE IHLHKTA
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 259
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEA+ V G I+GGG+ E+ER+RK+ARCIGLLFQVVDDILDVTKSSKELGKTAGKDL++
Sbjct: 260 LLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIA 319
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
DK TYPK+MG+E +R+FA L +A ++L F+ + APL LA YIA RQ+
Sbjct: 320 DKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 239/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA RVNKALD+ V LR P K+HEAMRYSLLAGGKRVRPVLC+A+CELVGG E AMP
Sbjct: 85 MIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 145 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 204
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ ++SP R+VRAI EL ++GSEGLVAG+++DI+SEG DV L LE IHLHKTA LLE
Sbjct: 205 TVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEG 264
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG+ +VE++RK+A IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 265 AVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 324
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +++FA L A E+L+ F++ ++APL LA YIA RQ+
Sbjct: 325 YPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQN 372
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/288 (70%), Positives = 238/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VNKALD++V LR P KIHEAMRYSLLAGGKRVRPVLC+A+CELVGG E++AMP
Sbjct: 63 MLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMP 122
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGDALL+ AFEH+AA
Sbjct: 123 AACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFAFEHIAAS 182
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ S R++RAI EL ++GSEGLVAG+++DI+SEG DV L LE IH+HKTA LLE
Sbjct: 183 TRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEG 242
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 243 AVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 302
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +++FA L A ++LA F+ +AAPL LA YIA RQ+
Sbjct: 303 YPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/288 (70%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD V L+ PAKIHE+MRYSLLAGGKRVRPVLC+A+CELVGG ES AMP
Sbjct: 79 MIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLAACELVGGSESMAMP 138
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGK TNH VFGED A+LAGDALL+ AFEH+A
Sbjct: 139 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAFAFEHIAVS 198
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRA+ EL +G+EGLVAG+++DI SEG +V L +LE IH+HKTAKLLE
Sbjct: 199 TLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHIHKTAKLLEG 258
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++R+YAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 259 AVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 318
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGIE +R+FA LL +A E LA F+ +AAPL LA YIA RQ+
Sbjct: 319 YPKLMGIEKSREFAEKLLNEARELLAGFDQEKAAPLIALANYIAYRQN 366
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/288 (71%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M A VN+AL+ V LR P KIHEAMRYSLLAGGKRVRP+LCIA+CELVGGD S AMP
Sbjct: 82 MDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAACELVGGDVSVAMP 141
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK FGED A+LAGDALLS AFEHVA
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGDALLSFAFEHVAVS 201
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ SPD++VRA+ EL AVG EGLVAG+++DI SEG DV L+ LE IH+HKTA LLEA
Sbjct: 202 TVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLEYIHVHKTAVLLEA 261
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVER+RK+A CIGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK T
Sbjct: 262 AVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVTKSSVELGKTAGKDLVADKVT 321
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMG+E +R+FA L A E+L F+ +AAPL LA+YIA RQ+
Sbjct: 322 YPKLMGLEKSREFAEKLRDDAVEQLRVFDQVKAAPLIALAHYIAYRQN 369
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/288 (71%), Positives = 239/288 (82%), Gaps = 4/288 (1%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES AMP C
Sbjct: 79 KADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARC 138
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKST 122
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGDALLS AFEH+A A S+
Sbjct: 139 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSS 198
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLLEA 179
E+SP RVVRA+ EL A+G+EGLVAG+++DI SEG D V L L+ IHLHKTA LLEA
Sbjct: 199 EVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEA 258
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+ V G IIGGG+ E+ER+RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK T
Sbjct: 259 SAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLT 318
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMG+E +R+FA L +A ++L F+ + APL LA YIA+RQ+
Sbjct: 319 YPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 244/288 (84%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA V+KALDE V ++ P KIHEAMRYSLLAGGKRVRP LC+A+CELVGGDES+AMP
Sbjct: 84 MIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGDESNAMP 143
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGD+LL+ AFEH+A
Sbjct: 144 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLATA 203
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
++ +S R+V A+ EL ++G+EGLVAG+++DI S G+ DV L++LE IH+HKTA LLEA
Sbjct: 204 TSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTAALLEA 263
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G ++GGG+ EVE++RKYAR +GLLFQVVDDILDVTKSS+ELGKTAGKDLV+DKAT
Sbjct: 264 AVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELGKTAGKDLVTDKAT 323
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMG+E +R+FA +L +A E+L+ F++ +AAPL LA YIA RQ+
Sbjct: 324 YPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 371
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K VN ALD V LR P +IHEAMRYSL+AGGKRVRPVLCIA+CELVGG+ES AMP
Sbjct: 76 MVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMP 135
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 136 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 195
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRAI EL ++G+EGLVAG+++DI+SEG D L +LE IHLHKTA LLEA
Sbjct: 196 TIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQLEYIHLHKTAALLEA 255
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG+ +VE++R +AR IGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK T
Sbjct: 256 AVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVT 315
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGIE +R+FA L A E+L+ F+ +AAPL LA YIA RQ+
Sbjct: 316 YPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIAYRQN 363
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/289 (69%), Positives = 239/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ SKA VN+ALD V LR+P +IHEAMRYSLLAGGKRVRPVLCI++CELVGG E AMP
Sbjct: 95 LRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGTEEVAMP 154
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNHKVFGE TAILAGDALLS AFEH+A +
Sbjct: 155 TACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSFAFEHIAVS 214
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
S + DR++R ++ELG +GS+GLV G++ DI SEG V L+ LE IH+HKTA LLE
Sbjct: 215 TSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTLEWIHIHKTAVLLE 274
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+CG II G + E+ER+++YAR +GLLFQVVDDILDVTKSSKELGKTAGKDL+SDKA
Sbjct: 275 CSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLISDKA 334
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA DLL +A E+L+ F+ +AAPL LA YIA RQ+
Sbjct: 335 TYPKLMGLEKAKQFASDLLIRAKEDLSCFDPMKAAPLLGLADYIAFRQN 383
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 234/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V LR P IHEAMRYSLLAGGKRVRPVLC+++CELVGGDES AMP
Sbjct: 82 MVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLCLSACELVGGDESVAMP 141
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEHVA
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVS 201
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + R++RAI EL ++GSEGLVAG+++DIDSEG +V L +LE IHLHKTA LLEA
Sbjct: 202 TVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTAALLEA 261
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG +VE +R +ARCIGLLFQ VDDILDVTKSS+ELGKTAGKDLV+DKAT
Sbjct: 262 SVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKDLVADKAT 321
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP+LMGIE +R+FA L +A E L F+ +AAPL LA YIA RQ+
Sbjct: 322 YPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIAYRQN 369
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/288 (70%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD V L+ PAKIHE+MRYSLLAGGKRVRPVLC+A+C+LVGG ES A+P
Sbjct: 78 MLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLAACDLVGGSESMALP 137
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGDALLS AFEH+A
Sbjct: 138 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLSFAFEHIAVS 197
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRAI EL A+G+EGLVAG+++DI SEG +V L +LE IH+HKTAKLLE
Sbjct: 198 TIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHVHKTAKLLEG 257
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++R YAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 258 AVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 317
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP+LMGIE +R+FA LL +A + LA F +AAPL LA YIA RQ+
Sbjct: 318 YPRLMGIEKSREFAERLLNEAKDMLAGFNQEKAAPLIALANYIAYRQN 365
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/288 (69%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA +N+AL+ V LR P KIHE+MRYSLLAGGKRVRP LC+A+CELVGGDES AMP
Sbjct: 81 MVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKRVRPALCLAACELVGGDESMAMP 140
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGE+ A+LAGDALL+ AFEH+A
Sbjct: 141 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVS 200
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VR + EL A+G+EGLVAG+++DI SEG +V L +LE IH+HKTAKLLE
Sbjct: 201 TLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHIHKTAKLLEG 260
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 261 AVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 320
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGIE +R+FA L +A E+LA F+ +AAPL LA YIA RQ+
Sbjct: 321 YPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYRQN 368
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/289 (69%), Positives = 238/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VN+ALD+ V +P KIHE+MRYSLLAGGKRVRP LCIA+CELVGG E AMP
Sbjct: 103 MYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMP 162
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+EMIHTM+L+HDDLPCMDND+ RRGKPTNHK FGEDTA+LAGDALLS AFEH+A +
Sbjct: 163 AACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARS 222
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLE 178
S + +RV+R I ELG ++GSEGLVAG+I+DI SEG V L LE IHLHKTA LLE
Sbjct: 223 TSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHKTAVLLE 282
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G IIGG + E+ER R+YARC+GLLFQVVDDILDVTK+S+ELGKTAGKDL+SDKA
Sbjct: 283 CSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEELGKTAGKDLISDKA 342
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +L+ +A EEL+YF+ +AAPL LA YIA RQ+
Sbjct: 343 TYPKLMGLEKAKEFAVELVNKAKEELSYFDPVKAAPLLGLADYIAFRQN 391
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/292 (68%), Positives = 240/292 (82%), Gaps = 5/292 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +KA+ VNKALD V LR P KIHEAM YSLLAGGKRVRPVLCIA+CELVGG+ES+AMP
Sbjct: 80 IITKAELVNKALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
CA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS +FEH+A+
Sbjct: 140 ARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLASA 199
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAK 175
++ +SP RVVRA+ EL A+G+EGLVAG+++DI SEG DV L LE IHLHKTA
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 259
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEA+ V G I+GGG+ E+ER+RK+ARCIGLLFQVVDDILDVTKSSKELGKTAGKDL++
Sbjct: 260 LLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIA 319
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
DK TYPK+MG+E +R+FA L +A ++L F+ + APL LA YIA RQ+
Sbjct: 320 DKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/288 (69%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+AL+ V LR P KIHEAMRYS+LAGGKRVRPVLCIA+CELVGG+ES AMP
Sbjct: 77 MIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAACELVGGEESMAMP 136
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDD PCMDNDD RRGKPTNHKVFGED A+LAGDALL+ +FEH+
Sbjct: 137 AACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFSFEHMTGS 196
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRA+ EL ++GSEGLVAG+++DI SEG DV L LE IH+HKTA LLE
Sbjct: 197 TVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLEFIHVHKTAALLEG 256
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ EVE++RK+ARCIGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK T
Sbjct: 257 SVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSTELGKTAGKDLVADKVT 316
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGIE +R+FA +L A E+L F+ +AAPL LA YIA RQ+
Sbjct: 317 YPKLMGIEKSREFAEELKNDAVEQLRGFDQEKAAPLIALANYIAYRQN 364
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 240/292 (82%), Gaps = 5/292 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +KA+ VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES+AMP
Sbjct: 80 IITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS AFEH+A+
Sbjct: 140 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASA 199
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAK 175
++ +SP RVVRA+ EL A+G+EGLVAG+++DI SEG DV L LE IHLHKTA
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 259
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEA+ V I+GGG+ E+ER+RK+ARCIGLLFQVVDDIL VTKSSKELGKTAGKDL++
Sbjct: 260 LLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELGKTAGKDLIA 319
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
DK TYPK+MG+E +R+FA L +A ++L F+ + APL LA YIA RQ+
Sbjct: 320 DKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 239/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA +N+ALD+ V LRHP KIHEAMRYSLLAGGKRVRP+LCIASCELVGG E S MP
Sbjct: 98 MFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEESVMP 157
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 158 SACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACS 217
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + ++V+R I ELG A+GSEGLVAG+++D+ S G +V L+ LE IH+HKTA LLE
Sbjct: 218 TKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEG 277
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G IIGGG+ E+ER+R++ARCIGL+FQVVDDILDVTKSS+ELGKTA KDLV+DK T
Sbjct: 278 SVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELGKTACKDLVADKLT 337
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +R+FA +L QA ++++ F+V +A PL LA YIA RQ+
Sbjct: 338 YPKLLGLEKSREFAQELNKQAMDQISVFDVEKAKPLICLADYIAHRQN 385
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 237/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K +N+AL+ + L+ PAKIHE+MRYSLLAGGKRVRP LC+A+CELVGG++S AMP
Sbjct: 83 MLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMP 142
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGDALL+ AFEH+A
Sbjct: 143 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVS 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S R+VRA+ EL A+G+EGLVAG+++DI+SEG +V L +LE IH+HKTAKLLE
Sbjct: 203 TLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEG 262
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 263 AVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 322
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L +A E+LA F+ +AAPL LA YIA RQ+
Sbjct: 323 YPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAHRQN 370
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/289 (68%), Positives = 236/289 (81%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VN+ALD V LR+P KIHEAMRYSLLAGGKRVRP+LCIA+CELVGG E AMP
Sbjct: 95 MRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMP 154
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IHTMSL+HDDLP MDNDD RRGKPTNHKVFGE TA+LAGDALLS AFEH+A
Sbjct: 155 TACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVS 214
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+++ + DRV+R ++ELG A+GSEG+ G++ DI S+G V L LE IH+HKTA LLE
Sbjct: 215 TSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLE 274
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G IIGG + E+ERVRKYARC+GLLFQVVDDILDVTKSS+ELGKTA KDL+SDKA
Sbjct: 275 CSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKA 334
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +LL +A EEL++F +AAPL LA YIA RQ+
Sbjct: 335 TYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/285 (69%), Positives = 237/285 (83%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALD+ V +R P K+HE+MRYSLLAGGKRVRPVLCIA+CELVGGDE++AMP AC
Sbjct: 84 KANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAAC 143
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGE+ AILAGDALL+ AFEH+A +
Sbjct: 144 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVG 203
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
+ P +VRA+ EL ++GSEGLVAG+++DI SEG KDV L LE IH+HKTA LLE AVV
Sbjct: 204 VPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVV 263
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG+ E+E++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK TYPK
Sbjct: 264 LGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKLTYPK 323
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+GIE +R+ A L A ++L+ F+ +AAPL L+ YIA RQ+
Sbjct: 324 LLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 368
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/289 (68%), Positives = 236/289 (81%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VN+ALD V LR+P KIHEAMRYSLLAGGKRVRP+LCIA+CELVGG E AMP
Sbjct: 95 MRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMP 154
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IHTMSL+HDDLP MDNDD RRGKPTNHKVFGE TA+LAGDALLS AFEH+A
Sbjct: 155 TACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVS 214
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+++ + DRV+R ++ELG A+GSEG+ G++ DI S+G V L LE IH+HKTA LLE
Sbjct: 215 TSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLE 274
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G IIGG + E+ERVRKYARC+GLLFQVVDDILDVTKSS+ELGKTA KDL+SDKA
Sbjct: 275 CSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKA 334
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +LL +A EEL++F +AAPL LA YIA RQ+
Sbjct: 335 TYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 237/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA V+ ALD+ + L +P KIHE+MRYSLLAGGKRVRP LCIA+CELVGG + AMP
Sbjct: 105 MKSKAVAVDAALDKAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMP 164
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNHKVFGEDTA+LAGDALLS AFEH+A
Sbjct: 165 TACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVA 224
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+++ P DR +R I+ELG +GS+GLV G+++DI SEG +V L LE IH+HKTA LLE
Sbjct: 225 TSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLE 284
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G I+GG E+ R+R+YARC+GLLFQVVDDILDVTKSS+ELGKTAGKDL++DKA
Sbjct: 285 CSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKA 344
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +L +A EEL+ F+ +AAPL LA YIA RQ+
Sbjct: 345 TYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 237/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA +N+AL+ + L+ PAKIHE+MRYSLLAGGKRVRP LC+A+CELVGG++S AMP
Sbjct: 83 MLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMP 142
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+ MIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGDALL+ AFEH+A
Sbjct: 143 AACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVS 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S R+VRA+ EL A+G+EGLVAG+++DI+SEG +V L +LE IH+HKTAKLLE
Sbjct: 203 TLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEG 262
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 263 AVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 322
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L +A E+LA F+ +AAPL LA YIA RQ+
Sbjct: 323 YPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYRQN 370
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/288 (69%), Positives = 238/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K K VN+ALD V +R P KIHEAMRYSLLAGGKRVRP+LCIA+CELVGG+ES AMP
Sbjct: 23 LLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGNESMAMP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GE+ A+LAGDALL+ AFE+VA
Sbjct: 83 SACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYVANA 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP RV+RAI EL +GSEGLVAG+++DI S G ++ L+ LE IHLHKTA LLEA
Sbjct: 143 TVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTAALLEA 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG +VER+RK+ARCIGLLFQVVDDILDVT SS+ELGKTAGKDLV+DKAT
Sbjct: 203 SVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVADKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E AR+FA L +ATE+L F+ +AAPL LA +IA RQ+
Sbjct: 263 YPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFIAHRQN 310
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/285 (69%), Positives = 237/285 (83%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALD+ V +R P K+HE+MRYSLLAGGKRVRPVLCIA+CELVGGDE++AMP AC
Sbjct: 24 KANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAAC 83
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGE+ AILAGDALL+ AFEH+A +
Sbjct: 84 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVG 143
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
+ P +VRA+ EL ++GSEGLVAG+++DI SEG KDV L LE IH+HKTA LLE AVV
Sbjct: 144 VPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVV 203
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG+ E+E++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK TYPK
Sbjct: 204 LGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKLTYPK 263
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+GIE +R+ A L A ++L+ F+ +AAPL L+ YIA RQ+
Sbjct: 264 LLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 308
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/287 (68%), Positives = 235/287 (81%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V L+ P KIHE+MRYSLLAGGKRVRPVLCIA+CELVGGD +AMP
Sbjct: 75 MLEKANLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAACELVGGDGLTAMP 134
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNH V+GE+ A+L GDA+LS AFEH+A
Sbjct: 135 AACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATA 194
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +S DR++RAI EL +GSEGLVAG+++DI SEG DV L LE IHLHKTA LLE +
Sbjct: 195 TKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGS 254
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+GGG+ E+E++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLVSDK TY
Sbjct: 255 VVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVSDKTTY 314
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+GIE +R+FA +L A E+L+ F+ +AAPL LA YIA RQ+
Sbjct: 315 PKLLGIEKSREFAEELNKDAQEQLSEFDPRKAAPLIALANYIAYRQN 361
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 236/289 (81%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA V+ ALD+ + L +P KIHE MRYSLLAGGKRVRP LCIA+CELVGG + AMP
Sbjct: 105 MKSKAVAVDAALDKAIPLEYPEKIHEPMRYSLLAGGKRVRPALCIAACELVGGSQDLAMP 164
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNHKVFGEDTA+LAGDALLS AFEH+A
Sbjct: 165 TACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVA 224
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+++ P DR +R I+ELG +GS+GLV G+++DI SEG +V L LE IH+HKTA LLE
Sbjct: 225 TSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDIASEGDANVDLKTLEWIHIHKTAVLLE 284
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G I+GG E+ R+R+YARC+GLLFQVVDDILDVTKSS+ELGKTAGKDL++DKA
Sbjct: 285 CSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKA 344
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +L +A EEL+ F+ +AAPL LA YIA RQ+
Sbjct: 345 TYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL++ V L+ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGG ES+AMP
Sbjct: 85 MLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK++GED A+LAGDALL+ +FEHVA
Sbjct: 145 SACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKS 204
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S DR+VR I EL +GSEGLVAG+++DI SEG +V L LE IH+HKTA LLEA
Sbjct: 205 TKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTAALLEA 264
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG + +VE++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 265 SVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTT 324
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L +A E+L F+ +AAPL LA YIA R +
Sbjct: 325 YPKLLGIEKSREFAEKLNREAQEQLEGFDSVKAAPLIALANYIAYRDN 372
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 234/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V L+ P KIHEAMRYSLLAGGKRVRP+LCIA+CELVGG ES AMP
Sbjct: 86 MLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIAACELVGGTESIAMP 145
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ +FEH+A
Sbjct: 146 AACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHIAVS 205
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + P R++RAI EL ++G+EGLVAG+++DI SEG DV L LE IHLHKTA LLE
Sbjct: 206 TEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEG 265
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG+ EVE++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 266 AVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 325
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMG+E +R+FA L A ++LA F+ +AAPL LA YIA RQ+
Sbjct: 326 YPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALANYIAHRQN 373
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/290 (69%), Positives = 236/290 (81%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V LR P KIHEA+RYSLLA GKRVRPVLCIA+CELVGG+ES A+P
Sbjct: 59 MIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDAL+S AFEH+A
Sbjct: 119 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT- 177
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
ST +SP RVVRAI EL A+GS+GLVAG+++D+ S G DV L LE IH+HKTA LL
Sbjct: 178 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 237
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EAA V G I+GGG+ EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK
Sbjct: 238 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADK 297
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E ++ FA LL+ A E+L F+ +R PL LA YIA RQ+
Sbjct: 298 LTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/290 (69%), Positives = 236/290 (81%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V LR P KIHEA+RYSLLA GKRVRPVLCIA+CELVGG+ES A+P
Sbjct: 59 MIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDAL+S AFEH+A
Sbjct: 119 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT- 177
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
ST +SP RVVRAI EL A+GS+GLVAG+++D+ S G DV L LE IH+HKTA LL
Sbjct: 178 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 237
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EAA V G I+GGG+ EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK
Sbjct: 238 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADK 297
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E ++ FA LL+ A E+L F+ +R PL LA YIA RQ+
Sbjct: 298 LTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/292 (70%), Positives = 244/292 (83%), Gaps = 5/292 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +KA+ VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES+AMP
Sbjct: 88 IITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 147
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS AFEH+A+
Sbjct: 148 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASA 207
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAK 175
++ +SP RVVRAI EL A+G+EGLVAG+++DI SEG DV L LE IHLHKTA
Sbjct: 208 TSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 267
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEA+ V G I+GGG+ E+ER+RK+ARCIGLLFQVVDDILDVTKSSKELGKTAGKDL++
Sbjct: 268 LLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIA 327
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
DK TYPK+MG+E +R+FA L +A ++L F+ A+AAPL LA YIA RQ+
Sbjct: 328 DKLTYPKIMGLEKSREFADKLNREARDQLLGFDSAKAAPLLALANYIAYRQN 379
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/288 (69%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALDE + L+ P KI+EAMRYSLLAGGKRVRPVLCIA+C LVGG E +++P
Sbjct: 84 MLEKANIVNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCIAACGLVGGKEEASIP 143
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGDALLS AFEHVA
Sbjct: 144 SACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVS 203
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P+R+VRAIAEL AVG EGLVAG+I+D++SEGK +V L LE IHL KTA LLEA
Sbjct: 204 TIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLEFIHLRKTAALLEA 263
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG E+E++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DKAT
Sbjct: 264 AVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLTADKAT 323
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +++FA L+ A + L F+V +AAPL L YIA RQ+
Sbjct: 324 YPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYIAYRQN 371
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K VN+ALD V L+ P KIHEAMRYSLLAGGKRVRPVLC+A+CELVGG ES AMP
Sbjct: 78 MIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESMAMP 137
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGE+ A+LAGDALL+ AFEH+A
Sbjct: 138 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAFEHIAVS 197
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S R+VR+I EL ++GSEGLVAG+++DI SEG DV L +LE IH+HKTA LLEA
Sbjct: 198 TVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHKTAALLEA 257
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ IE+E++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 258 SVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 317
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGIE +R+FA L A + L+ F+ +AAPL LA YIA RQ+
Sbjct: 318 YPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQN 365
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 240/288 (83%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL+ VQ++ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGG+ES+AMP
Sbjct: 57 MVEKADSVNKALEAVVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMP 116
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLSLAFEHVA
Sbjct: 117 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSLAFEHVAVA 176
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +P+R++RA+ +L ++G+EGLVAG+++DI SEG +V L+ LE IHLHKTA LL+
Sbjct: 177 TRGSAPERILRALGQLAKSIGAEGLVAGQVVDICSEGMAEVGLDHLEFIHLHKTAALLQG 236
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG EVER+RK+A+CIGL+FQVVDDILDVTKSS ELGKTAGKDLV+DK T
Sbjct: 237 SVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILDVTKSSHELGKTAGKDLVADKTT 296
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G++ +++FA DL +A E+L +F+ +AAPL +A YIA R +
Sbjct: 297 YPKLLGVQKSKEFADDLNREAQEQLLHFDSHKAAPLIAIANYIAYRNN 344
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/287 (68%), Positives = 236/287 (82%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K+ VN+ALDE V L+ P KIHEAMRYSLLAGGKRVRPVLC+A+C+LVGG ES+A+P
Sbjct: 88 MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 147
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDNDD RRGKPTNH++FGED A+LAGDALLS AFEH+AA
Sbjct: 148 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 207
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
E+SP+RVVRAI EL A G+ GLVAG+++DIDSEG DV L LE IH+HKTA LLEA
Sbjct: 208 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 267
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
A V G I+GGG+ E+E++R +AR IGLLFQVVDDILDVTKS++ELGKTAGKD+ ++KAT
Sbjct: 268 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 327
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YPKLMGIE +++FA L +A E LA F+ +A PL L+ YIA RQ
Sbjct: 328 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 374
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K K VN+ALD + +R P KIHEAMRYSLLAGGKRVRP+LCIA+ ELVGG+ES AMP
Sbjct: 77 LLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGNESMAMP 136
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GE+ A+LAGDALL+ AFE+VA
Sbjct: 137 SACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYVANA 196
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP RVVRAI EL +GSEGLVAG+++DI S G ++ L+ LE IHLHKTA LLEA
Sbjct: 197 TVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTAALLEA 256
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG +VER+RK+ARCIGLLFQVVDDILDVT SS+ELGKTAGKDLV+DKAT
Sbjct: 257 SVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVADKAT 316
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E AR+FA L +A E+L F+ AAPL LA YIA RQ+
Sbjct: 317 YPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEAAPLLALAEYIAHRQN 364
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/287 (68%), Positives = 236/287 (82%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K+ VN+ALDE V L+ P KIHEAMRYSLLAGGKRVRPVLC+A+C+LVGG ES+A+P
Sbjct: 53 MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 112
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDNDD RRGKPTNH++FGED A+LAGDALLS AFEH+AA
Sbjct: 113 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 172
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
E+SP+RVVRAI EL A G+ GLVAG+++DIDSEG DV L LE IH+HKTA LLEA
Sbjct: 173 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 232
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
A V G I+GGG+ E+E++R +AR IGLLFQVVDDILDVTKS++ELGKTAGKD+ ++KAT
Sbjct: 233 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 292
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YPKLMGIE +++FA L +A E LA F+ +A PL L+ YIA RQ
Sbjct: 293 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 339
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL+ TV LR+P KIHE+MRYS+LAGGKRVRP+LCIA+CELVGG ES+AMP
Sbjct: 1 MLGKADSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGD+LL+ AFE +A
Sbjct: 61 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATS 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+T + DR+VR I EL ++GSEGLVAG+++DI SEG DV L LE IH+HKTA LLE
Sbjct: 121 TTGVPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEG 180
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG EVE++RK+ARCIG LFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 181 SVVLGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTT 240
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +R+FA L +A ++LA F++ +AAPL LA YIA R +
Sbjct: 241 YPKLIGLEKSREFAEKLNREAQDQLAAFDIEKAAPLIALANYIAYRNN 288
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VN ALD+ V +++P KI EAMRYSLLAGGKRVRP LCIA+CELVGG+E +MP
Sbjct: 1 MKSKAQAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLPCMDNDD RRGKPTNHKVFGEDTA+LAGDALL+ AFEH+A
Sbjct: 61 AACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARD 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+T + DRV+R IA LG AVGSEGLVAG+I+DI SEG V L LE +H HKTA LLE+
Sbjct: 121 TTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLES 180
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VVCG I+GG + E+ R+ KYAR +GLLFQVVDDILDVTKSS ELGKTAGKDL++DKAT
Sbjct: 181 SVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKAT 240
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E ++ FA +L +A ++L+ F+ +AAPL LA YIA RQ+
Sbjct: 241 YPKLLGLEKSKAFAEELTRKAKDQLSVFDQQKAAPLLGLADYIAYRQN 288
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL++ V +R P KIHE+MRYSLLAGGKRVRP+LCIA+CEL GG ES AMP
Sbjct: 96 MIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMP 155
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 156 SACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATA 215
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S +R+VR + EL +GSEGLVAG+++D+ SEG DV L LE IH+HKTA LLE
Sbjct: 216 TKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEG 275
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG N ++ ++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 276 SVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 335
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GI+ +R+FA L +A E+LA F+ +AAPL LA YIA R +
Sbjct: 336 YPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 383
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL++ V +R P KIHE+MRYSLLAGGKRVRP+LCIA+CEL GG ES AMP
Sbjct: 70 MIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMP 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 130 SACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATA 189
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +S +R+VR + EL +GSEGLVAG+++D+ SEG DV L LE IH+HKTA LLE
Sbjct: 190 TKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEG 249
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG N ++ ++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 250 SVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 309
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GI+ +R+FA L +A E+LA F+ +AAPL LA YIA R +
Sbjct: 310 YPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KAK VNKAL+ VQ++ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGGDES+AMP
Sbjct: 90 MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMP 149
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH FGE A+LAGDALLS AFEHVAA
Sbjct: 150 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAA 209
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ P+R+VR + EL ++GSEGLVAG+++D+ SEG +V L+ LE IH HKTA LL+
Sbjct: 210 TKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQG 269
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG EV ++RK+A CIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK T
Sbjct: 270 SVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTT 329
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +++FA L +A E+L +F RAAPL LA YIA R +
Sbjct: 330 YPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 232/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KAK VNKAL+ VQ++ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGGDES+AMP
Sbjct: 90 MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMP 149
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH FGE A+LAGDALLS AFEHVAA
Sbjct: 150 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAA 209
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ P+R+VR + EL +VGSEGLVAG+++D+ SEG +V L+ LE IH HKTA LL+
Sbjct: 210 TKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQG 269
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGGN EV ++RK+A CIGLLFQVVDDILDVTKSSKELGK AGKDLV+DK T
Sbjct: 270 SVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKAGKDLVADKTT 329
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E + +FA L +A E+L +F RAAPL LA YIA R +
Sbjct: 330 YPKLIGVEKSMEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/287 (65%), Positives = 238/287 (82%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K VN+ALD +V L+ P KIHE+MRYSLLAGGKR+RP++CIA+CE+VGG+ +AMP
Sbjct: 75 MLEKVNMVNEALDASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAACEIVGGNILNAMP 134
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSLVHDDLPCMDNDDFRRGKP +HKV+GE+ A+L GDALLSL+FEH+A
Sbjct: 135 AACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGDALLSLSFEHIATA 194
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +S DR+VRAI EL +VGSEGLVAG+++DI SEG DV L+ LE IH+HKTA LLE++
Sbjct: 195 TKGVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESS 254
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+GGG+ ++E++RK+AR IGLLFQVVDDILDVTKS++ELGKTAGKDL++DK TY
Sbjct: 255 VVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGKTAGKDLLTDKTTY 314
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+GIE +R+FA L +A E+L+ F+ +AAPL LA Y A RQ+
Sbjct: 315 PKLLGIEKSREFAEKLNKEAQEQLSGFDRRKAAPLIALANYNAYRQN 361
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KAK VNKAL+ VQ++ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGGDES+AMP
Sbjct: 8 MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMP 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH FGE A+LAGDALLS AFEHVAA
Sbjct: 68 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAA 127
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ P+R+VR + EL ++GSEGLVAG+++D+ SEG +V L+ LE IH HKTA LL+
Sbjct: 128 TKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQG 187
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG EV ++RK+A CIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK T
Sbjct: 188 SVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTT 247
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +++FA L +A E+L +F RAAPL LA YIA R +
Sbjct: 248 YPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 295
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/289 (65%), Positives = 241/289 (83%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VN+ALD+ + R+P KI+E+MRYSLLAGGKRVRP+LCIA+CEL+GG E AMP
Sbjct: 98 MHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGTEELAMP 157
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+EMIHTMSL+HDDLP +DNDD RRGKPTNHKVFGEDTAI+AGDALLSLAFEHVA +
Sbjct: 158 TACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAFEHVAVS 217
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLE 178
S + D ++R ++E+G A GSEG++ G+++DI+SEG + L LE +H+HKTA LLE
Sbjct: 218 TSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHKTAVLLE 277
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VVCG I+GG + ++ER R+YARC+GLLFQVVDDILDV++SS+ELGKTAGKDL+SDKA
Sbjct: 278 CSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEELGKTAGKDLISDKA 337
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +LL + +EL+ F+ +AAPL+ LA YIASRQ+
Sbjct: 338 TYPKLMGLEKAKEFADELLNRGKQELSCFDPTKAAPLFALADYIASRQN 386
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/284 (66%), Positives = 235/284 (82%), Gaps = 1/284 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K++ VN+AL++ V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CE+VGG+ES+AM
Sbjct: 29 MVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVGGNESTAMA 88
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGE+ A+LAGDALL+ AFEH+A
Sbjct: 89 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAFAFEHIAVS 148
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
++ +SP+R++ AI EL ++G+EGLVAG+++DI+SEG D+ L +LE IHLHKTA LLE
Sbjct: 149 TSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLHKTAALLEG 208
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG EVE++R +AR IGL+FQVVDD+LDVTKSSKELGKTAGKDLV+DK T
Sbjct: 209 SVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTAGKDLVADKVT 268
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIA 283
YPKL+GIE + +FA L A E+L+ F+ + APL LA YIA
Sbjct: 269 YPKLLGIEKSNEFAQKLNRDAQEQLSGFDPVKVAPLIALANYIA 312
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 235/285 (82%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALDE V ++ P I+EAMRYSLLAGGKRVRP+LC+A+CELVGGD+S+AMP AC
Sbjct: 82 KAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAAC 141
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGD+LL+ AFE +A +
Sbjct: 142 AVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFEFIATATAG 201
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVV 182
+SP R++ AI EL ++G+EGLVAG++ DI G +V L+ LE IH+HKTA LLEA+VV
Sbjct: 202 VSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVV 261
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV DK TYPK
Sbjct: 262 LGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPK 321
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A++FA +L A ++LA F+ +AAPL LA YIA+RQ+
Sbjct: 322 LLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLVALADYIANRQN 366
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/289 (65%), Positives = 238/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA VN+AL++ + LR+P KI+E+MRYSLLAGGKRVRPVLCIA+CELVGG E A+P
Sbjct: 93 MDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGTEELAIP 152
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPC+DNDD RRGKPTNHK+FGEDTA+ AG+AL S AFEH+A
Sbjct: 153 TACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAFEHIAVS 212
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLE 178
+++ + DR++R ++ELG A GSEG++ G+++DI SEG + L LE IH+HKTA LLE
Sbjct: 213 TSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHKTAMLLE 272
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VVCG IIGG + I +ER R+YARC+GLLFQVVDDILDVTKSS ELGKTAGKDL+SDKA
Sbjct: 273 CSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKDLISDKA 332
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++F+ +LL +A EL+ F+ +AAPL LA Y+A RQ+
Sbjct: 333 TYPKLMGLEKAKEFSDELLNRAKGELSCFDPVKAAPLLGLADYVAFRQN 381
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/288 (67%), Positives = 233/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD+++ L P KI E+MRYSLLAGGKR+RP+LCIA+CELVGGDES+AMP
Sbjct: 84 MLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAGGKRIRPMLCIAACELVGGDESTAMP 143
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLPCMDNDD RRGKPTNHKVF ED A+LAGDA+L+ +FEHVA+
Sbjct: 144 AACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASL 203
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLEA 179
+ + +R+VR I EL VG EGLVAG+++DI SEG D V L LE IHL+KTA LLE
Sbjct: 204 TKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEG 263
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ EVE++R +ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK T
Sbjct: 264 SVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTT 323
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +++FA L +A E LA F+ +AAPL LA YIA R +
Sbjct: 324 YPKLIGIEKSKEFAERLNREAKEHLAGFDQNKAAPLIALADYIAYRDN 371
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/285 (65%), Positives = 234/285 (82%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA+ VNKAL+ V L+ P ++HE+MRYSLLAGGKR+RP+LCIA+CE+VGGDE++AMP AC
Sbjct: 79 KAESVNKALEAAVLLKEPLRVHESMRYSLLAGGKRIRPMLCIAACEMVGGDEATAMPAAC 138
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGE+ A+LAGDALLS AFEH+A +
Sbjct: 139 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAVLAGDALLSFAFEHIATATKG 198
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
+S +++VR I EL +G+EGLVAG+++DI SEG DV L LE IHLHKTA LLEA+VV
Sbjct: 199 VSSEKIVRVIGELAKCIGAEGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEASVV 258
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G ++GGG EV ++RK+AR IGLLFQVVDDILDVTKSS ELGKTAGKDLV+DK TYPK
Sbjct: 259 LGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSHELGKTAGKDLVADKVTYPK 318
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G++ +R+FA L +A +L+ F+ +AAPL LA YIA R++
Sbjct: 319 LLGLQKSREFAEQLNKEAQAQLSGFDQGKAAPLIALANYIAYREN 363
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 238/288 (82%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA VN+ALD V LR P K+HE+MRYS+L+GGKRVRPVLCIA+CELVGG E AMP
Sbjct: 94 MHAKAISVNQALDRAVPLRFPQKLHESMRYSILSGGKRVRPVLCIAACELVGGTEELAMP 153
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACA+EMIH M+L+HDD+PC+DNDD RRGKPTNHKVFGE TA++AG ALLS+AFEH+A
Sbjct: 154 IACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVALLSVAFEHIAVS 213
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+++ + DR++R ++ELG GS+G++ G+ +D+ SEG V+L L+ IH HKTA LLE
Sbjct: 214 TSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQWIHAHKTAVLLE 273
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
++VVCG IIGG + E+ER+R+YA C+G+LFQVVDDILDVTKSS+ELGKTAGKDL+SDKA
Sbjct: 274 SSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGKTAGKDLMSDKA 333
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYPKLMG+E +++F+ +LL +A +EL+YF+ A+ APL LA YIA RQ
Sbjct: 334 TYPKLMGLEKSKQFSIELLDRAKKELSYFDPAKTAPLLALADYIAFRQ 381
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 234/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T KA VNKALDE + ++ P IHEAMRYSLLAGGKRVRP+LC+A+CELVGG++ +AM
Sbjct: 82 VTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMA 141
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK++GED A+LAGD+LL+ AFEH+
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNS 201
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ ++P R+V A+AEL ++G+EGLVAG++ DI G VSL LE IH+HKTA LLE+
Sbjct: 202 TAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLES 261
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG +EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV DK T
Sbjct: 262 SVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTT 321
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E A++FA +L +A ++L F+ +AAPL LA YIA R +
Sbjct: 322 YPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/288 (65%), Positives = 232/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD+++ L P KIHE+MRYSLLAGGKR+RP+LCIA+CELVGG+ES+AMP
Sbjct: 67 MLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKRIRPLLCIAACELVGGEESTAMP 126
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLPCMDNDD RRGKPTNHK+F ED A+LAGDA+L+L+FEHVA
Sbjct: 127 AACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKIFSEDVAVLAGDAMLALSFEHVATS 186
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + +R++R I EL +G EGLVAG+++DI SEG V L LE IH +KTA LLE
Sbjct: 187 TKGVPSERIIRVIYELAKCIGCEGLVAGQVVDISSEGMTQVGLEHLEFIHSNKTAALLEG 246
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G ++GGG+ EVE++RK+ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK T
Sbjct: 247 SVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTT 306
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L +A ++L F +AAPL LA YIA R +
Sbjct: 307 YPKLIGIEKSREFAERLNREAQDQLLGFHHNKAAPLIALANYIAYRDN 354
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/289 (64%), Positives = 239/289 (82%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K V+KALDE++ +++P IHEAMRYSLLAGGKRVRP+LCIA+CELVGG+E++AMP
Sbjct: 68 MLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELVGGEEATAMP 127
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDDFRRGKPTNHKV+GED A+LAGD+LL+ AFE+V+++
Sbjct: 128 AACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSSR 187
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE-GKDVSLNELENIHLHKTAKLLEA 179
+ SP RV+ AI EL ++G+EGLVAG+++DI S G+D+ L++LE IH+HKTA LLEA
Sbjct: 188 TEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHIHKTAALLEA 247
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ +VE++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL+ DK T
Sbjct: 248 SVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLVDKTT 307
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAY-YIASRQH 287
YPKL+G++ +R+FA +LLA+A ++L FE A YIA RQ+
Sbjct: 308 YPKLLGLDKSRQFAEELLAEAKQQLEEFESQAAVAPLLALAEYIAYRQN 356
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/289 (67%), Positives = 233/289 (80%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ SKA VN+AL+ V LR+P KIHEAMRYSLLAGGKR+RP+L IA+CELVGG E AMP
Sbjct: 95 LHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGSEELAMP 154
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD RRGK TNHKVFGE TA+LAGDALLS AFEH+A
Sbjct: 155 TACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAFEHIAVS 214
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLE 178
+ + ++ RV+R ++ELG A+GS+G+ G++ DI SEG V L LE IH+HKTA LLE
Sbjct: 215 TRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHKTAVLLE 274
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AVV G IIGG + E+ER +YARC+GLLFQVVDDILDVT+SS+ELGKTAGKDLVSDKA
Sbjct: 275 CAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEELGKTAGKDLVSDKA 334
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E A++FA +LL +A EEL+ F A+AAPL LA YIA RQ+
Sbjct: 335 TYPKLMGLEKAKEFADELLDRAKEELSCFNPAKAAPLLGLADYIALRQN 383
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/285 (65%), Positives = 232/285 (81%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KAK VNKAL+ V ++ P +IHE+MRYSLLAGGKR+RP+LCIA+CELVGGDE +AMP AC
Sbjct: 89 KAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAACELVGGDEETAMPAAC 148
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGDALL+ AFEH+A +
Sbjct: 149 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIATATKG 208
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
S +++VR + EL ++G+EGLVAG+++DI SEG +V L LE IHLHKTA LLE +VV
Sbjct: 209 ASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEFIHLHKTAALLEGSVV 268
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG E+ ++RK+AR IGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK TYPK
Sbjct: 269 LGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKVTYPK 328
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+GI+ +R+FA L +A +L+ F+ +AAPL LA YIA R +
Sbjct: 329 LLGIQKSREFAEQLNNEAQAQLSGFDQEKAAPLIALANYIAYRDN 373
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/286 (67%), Positives = 234/286 (81%), Gaps = 2/286 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELV-GGDESSAMPVA 62
K VN ALDE + +R+P KIHEAMRYSLLAGGKRVRP+LCIA+ E++ GG + +AMP A
Sbjct: 42 KGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMPSA 101
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+EMIHTMSL+HDDLPCMDNDD RRGKPT HK FGEDTA+LAGDA+LSLAFEH+A S
Sbjct: 102 IAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSA 161
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLEAAV 181
+ +RVVR ++ELGSAVGS+GLVAG+I+DI EGK+ V L+ L IH+HKT KLLEAA
Sbjct: 162 GVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRYIHIHKTGKLLEAAG 221
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
VCG I GG + EV RVR Y++ +GLLFQVVDDILDVTKSS+ELGKTAGKDL+SDK TYP
Sbjct: 222 VCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTTYP 281
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KL+G++ AR +A +LLA+A ++LA F +RAAPL LA YIA RQ+
Sbjct: 282 KLLGLQGARDYAEELLAEAKQQLAAFGESRAAPLLALADYIAYRQN 327
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 238/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA +N+ALD V +R P KIHE+MRYSLLAGGKRVRP LC+A+CELVGG+ES AMP
Sbjct: 82 MLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMP 141
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNH VFGED A+LAGDALL+LAFEH+A
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLALAFEHIAIA 201
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ +SP R+VRA+ EL A+G+EGLVAG+++DI SEG +V L +LE IH+HKTAKLLE
Sbjct: 202 TLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKLEFIHVHKTAKLLEG 261
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GGG EVE++RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK T
Sbjct: 262 AVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 321
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMGI+ +R+FA L +A E+LA F+ +AAPL LA YIA RQ+
Sbjct: 322 YPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYRQN 369
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/285 (65%), Positives = 231/285 (81%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALDE V ++ P IHEAMRYSLLAGGKRVRP+LC+A+CELVGGD+S+AMP AC
Sbjct: 82 KAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAAC 141
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GED A+LAGD+LL+ AFE++A +
Sbjct: 142 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAG 201
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVV 182
+SP R++ AI EL ++G+EGLVAG++ DI G +V L+ LE IH+HKTA LLEA+VV
Sbjct: 202 VSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVV 261
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG EVE++R +ARCIGLLFQVVDDILDVTKSS+ LGKTAGKDL DK TYPK
Sbjct: 262 LGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAGKDLAVDKTTYPK 321
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A++FA +L A ++L F+ +AAPL LA YIA R++
Sbjct: 322 LLGLEKAKEFAAELNRDAKQQLVEFDPHKAAPLIALADYIAYREN 366
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/288 (69%), Positives = 238/288 (82%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+RVN+ALD V R P IHE+MRYSLLAGGKRVRP+LCIASCELVGGDE +AMP
Sbjct: 72 MKEKAERVNRALDAAVAQREPRWIHESMRYSLLAGGKRVRPLLCIASCELVGGDERTAMP 131
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA EMIHTMSL+HDDLPCMDNDD RRGKPTNHKV+GE+ A+LAGDALL+LAFEHVAA
Sbjct: 132 AACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLALAFEHVAAA 191
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ ++P+RVVRA+ E G +GSEGLV G+++DI SEG +V + +LE IHLHKTA LLEA
Sbjct: 192 TEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHLHKTAALLEA 251
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GG + VE++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK T
Sbjct: 252 AVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKTT 311
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +R+FA L A A ++L F+ ARAAPL LA YIA R +
Sbjct: 312 YPKLLGLEKSREFAEKLRADACDQLVGFDPARAAPLIALANYIAYRNN 359
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/288 (65%), Positives = 231/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKAL+ V L+ P KIHE+MRYSLLAGGKRVRP+LC+A+CELVGG S+AMP
Sbjct: 64 MLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLAACELVGGHPSTAMP 123
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+HDDLPCMDND RRG PTNH VFGED A+LAGDALL+ +FE++A
Sbjct: 124 AACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFEYLATA 183
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + P+R+VR IAEL + SEGL+AG+++DI SEG ++ L LE IHLHKTA LLE
Sbjct: 184 TEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTAALLEG 243
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGGN EVER+RK+ARCIGLLFQVVDDILDVTK+S ELGKTAGKDLV+DK T
Sbjct: 244 SVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGKDLVADKTT 303
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L +A E+L F+ +AAPL LA YIA R++
Sbjct: 304 YPKLIGIEKSREFAEKLNREAQEQLVGFDSDKAAPLIALANYIAYREN 351
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/286 (67%), Positives = 233/286 (81%), Gaps = 2/286 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELV-GGDESSAMPVA 62
K VN ALDE + +R+P KIHEAMRYSLLAGGKRVRP+LCIA+ E++ GG + +AMP A
Sbjct: 81 KGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMPSA 140
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+EMIHTMSL+HDDLPCMDNDD RRGKPT HK FGEDTA+LAGDA+LSLAFEH+A S
Sbjct: 141 IAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSA 200
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLEAAV 181
+ +RVVR ++ELGSAVGS+GLVAG+I+DI EGK+ V L+ L IH+HKT KLLEAA
Sbjct: 201 GVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRYIHIHKTGKLLEAAG 260
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
VCG I GG + EV RVR Y++ +GLLFQVVDDILDVTKSS+ELGKTAGKDL+SDK TYP
Sbjct: 261 VCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTTYP 320
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KL+G++ AR +A +LLA A ++LA F +RAAPL LA YIA RQ+
Sbjct: 321 KLLGLQGARDYAEELLAGAKQQLAAFGESRAAPLLALADYIAYRQN 366
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 236/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ KA VNKALD+ V +R+P IH+AMRYSLLAGGKRVRP+LCIA+CE+VGG +S+A+P
Sbjct: 77 VVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQSAAIP 136
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFE +A
Sbjct: 137 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEFMATA 196
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+T ++P+R++ A+ EL A+G+EGLVAG+++D++ G +V L+ LE IH+HKTA LLEA
Sbjct: 197 TTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTAALLEA 256
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ ++E++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL DK T
Sbjct: 257 SVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELGKTAGKDLAVDKTT 316
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G++ A +FA L +A +LA F+ ++AAPL LA YIA RQ+
Sbjct: 317 YPKLLGLDKAMEFAEKLNEEAKAQLAGFDPSKAAPLTALADYIAHRQN 364
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/290 (65%), Positives = 232/290 (80%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA V +ALD+ + +P KIHE+MRYSLLAGGKRVRPVLCIA+CELVGG E AMP
Sbjct: 99 MLSKAMAVTEALDKAIPHSYPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMP 158
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA- 119
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFG+DTA+LAGDAL + AFEH+ A
Sbjct: 159 TACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAF 218
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD--VSLNELENIHLHKTAKLL 177
S + D ++RA+ EL A G +G++ G+I+DI SE +D V L LE IH+HKTA L
Sbjct: 219 TSKSVGSDGILRAVTELARATGPQGIMGGQIVDIASE-RDAFVDLQTLEWIHIHKTAVLF 277
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A VCG IIGG + E+ER+R++AR +GLLFQVVDDILDVTKSS++LGKTAGKDLVSDK
Sbjct: 278 ECATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSEDLGKTAGKDLVSDK 337
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
ATYPKLMG+E A+ F+ +LL +A EEL+ F+ +AAPL+ LA Y+A RQ+
Sbjct: 338 ATYPKLMGLEKAKGFSLELLNKAKEELSCFDPMKAAPLFGLADYMALRQN 387
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/288 (66%), Positives = 232/288 (80%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD +V L+ P KIHE+MRYSLLAGGKRVRP+L IA+CEL GG E+ AMP
Sbjct: 78 MLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPILSIAACELFGGHEAVAMP 137
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD RRGKPTNHKV+GE A+LAGDA+L+LAF VA +
Sbjct: 138 SACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFHLVATE 197
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
++ +S +VVR I EL A+G+EGLVAG+I+D+ SEG ++ L +LE IH KTA LLE
Sbjct: 198 TSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHRSKTAALLEG 257
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GG N EVE+VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK T
Sbjct: 258 SVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTT 317
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+F+ +L +A ++LA F +AAPL +A YIA+R +
Sbjct: 318 YPKLIGIEKSREFSDELKREAVDQLAGFNSDKAAPLIAMANYIANRDN 365
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/287 (62%), Positives = 231/287 (80%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +AK VNKALDE V ++P ++E+MRYSLLAGGKRVRP LC+A+CEL+GGD +A+P
Sbjct: 26 MVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGDVQAALP 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDDFRRG+PTNHKV+GED AIL+GDALL+ AFEH+A
Sbjct: 86 AACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAFEHIARA 145
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +S +RV+R I ELG A G+EGLVAG+++DI SE K+V L+ L+ IHLHKTA LLEA+
Sbjct: 146 TKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKTAALLEAS 205
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GG + +E++RKY+R IGL FQVVDDILDVT+++++LGKTA KDL +K TY
Sbjct: 206 VVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDLAVNKTTY 265
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E +R+ A L+ +A ++L F+ +AAPL LA YI RQ+
Sbjct: 266 PKLLGLEKSREVAEQLINEAIQQLDGFDKVKAAPLVALAKYIGYRQN 312
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/288 (63%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ KA VNKALD+ V +R+P IH+AMRYSLLAGGKRVRP+LCIA+CE+VGG +S+A+P
Sbjct: 77 VVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQSAAIP 136
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFG+D A+LAGDALL+ AFE +A
Sbjct: 137 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGDALLAFAFEFMATA 196
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+T ++P+R++ A+ EL A+G+EGLVAG+++D++ G +V L+ LE IH+HKTA LLEA
Sbjct: 197 TTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTAALLEA 256
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+GGG+ ++E++R +AR IGLL QVVDDILDVTKSS+ELGKTAGKDL DK T
Sbjct: 257 SVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELGKTAGKDLAVDKTT 316
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G++ A +FA L +A +LA F+ ++AAPL LA YIA RQ+
Sbjct: 317 YPKLLGLDKAVEFAEKLNEEAKAQLAGFDPSKAAPLTALADYIAHRQN 364
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/289 (62%), Positives = 233/289 (80%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +A VN+ALD++V L++P I+E+MRYSLLAGGKRVRP LC+A+CE VGG+ + AMP
Sbjct: 1 MKERATLVNEALDKSVPLQYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIAQAMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLP MDNDDFRRGKPTNHKV+GED AILAGDALL LAFE++ +
Sbjct: 61 TACAMEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEYICRE 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHLHKTAKLLE 178
+ ++P+R+VR + E+G A G+EGLVAG+I+DI SEG + V L L+ IH HKTA LLE
Sbjct: 121 TRGVAPERIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTAALLE 180
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+VVCG ++GG +VER+RKYARCIGL FQVVDDILD+T+SS+ LGKTAGKDL+SDK
Sbjct: 181 ASVVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGKDLLSDKT 240
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+GIE +++ A L+A A E+L+ ++ A+ APL LA YI +R +
Sbjct: 241 TYPSLLGIERSKEVAQQLIADAKEQLSCYDPAKVAPLLGLATYIGARTN 289
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/289 (66%), Positives = 230/289 (79%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD +V L+ P KIHE+MRYSLLAGGKRVRP+L IA+CEL GG E+ AMP
Sbjct: 78 MLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHEAVAMP 137
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD RRGKPTNHKV+GE A+LAGDA+L+LA H+ A
Sbjct: 138 SACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVAT 197
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLE 178
T +S D+VVR I EL A+G+EGLVAG+I+D+ SEG ++ L +LE IH KTA LLE
Sbjct: 198 ETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKTAALLE 257
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G I+GG N EVE+VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV+DK
Sbjct: 258 GSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKT 317
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKL+GIE +R+F+ +L +A ++LA F + APL +A YIA+R +
Sbjct: 318 TYPKLIGIEKSREFSDELKREAIDQLAGFNSDKTAPLIAMANYIANRDN 366
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/285 (67%), Positives = 235/285 (82%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKAL+ +V ++ P KIHE+MRYSLLAGGKR+RP+LCIASCELVGGDES+AMP AC
Sbjct: 79 KANSVNKALESSVLIKDPVKIHESMRYSLLAGGKRIRPMLCIASCELVGGDESTAMPAAC 138
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK++GED A+LAGDALL+LAFEH+A ++
Sbjct: 139 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATQTKG 198
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
+ R+VR I EL +G+E LVAG+++DI SEG DV L LE IHLHKTA LLE +VV
Sbjct: 199 VPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVV 258
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GG + EVE++RK+ARCIGLLFQVVDDILDVTKSS++LGKTAGKDLV+DK TYPK
Sbjct: 259 LGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPK 318
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+GI+ +R FA +L +A +LA F+ +AAPL LA YIA R++
Sbjct: 319 LIGIDKSRDFAEELNKEAQAQLAGFDQEKAAPLIALANYIAYREN 363
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/287 (60%), Positives = 230/287 (80%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +AK VNKA+DE V L++P ++E+MRYSLLAGGKRVRP LC+A+CELVGGD +A+P
Sbjct: 59 MVDRAKLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLP MDNDDFRRG+PTNHKV+GED AILAGDALLS +FEH+A
Sbjct: 119 AACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARA 178
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ + +RV+R I ELG AVG +GLVAG+++DI SE K+V L+ L+ IH HKTA LLEA+
Sbjct: 179 TKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEAS 238
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+GG + +E++RKY+ IGL FQV+DDILDVT ++++LGKTA KDL +K TY
Sbjct: 239 VVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLAVNKTTY 298
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E +++ A DL+ +A ++L F+ A+AAPL LA +I RQ+
Sbjct: 299 PKLLGLEKSKQVADDLIKEAIQQLDGFDAAKAAPLVALAKFIGYRQN 345
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 234/285 (82%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKAL+ V ++ P IHE+MRYSLLAGGKR+RP+LCIA+CELVGG ES+AMP AC
Sbjct: 76 KAISVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAAC 135
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK++GED A+LAGDALL+LAFEH+A +
Sbjct: 136 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKG 195
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVV 182
+S DR+VR I EL +G+EGLVAG+++DI SEG DV L LE IHLHKTA LLE +VV
Sbjct: 196 VSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVV 255
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GG +VE++RK+ARCIGLLFQVVDDILDVTKSS++LGKTAGKDLV+DK TYPK
Sbjct: 256 LGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPK 315
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+GIE +R+FA +L +A +L F+ +AAPL+ LA YIA R++
Sbjct: 316 LIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIAYREN 360
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/289 (63%), Positives = 221/289 (76%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VNKALDE + + P KIHEAMRY++LA GKRVRP+LC+ASCELVGG E++AMP
Sbjct: 85 MISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKV+GE AIL+G ALLSLAFEH+
Sbjct: 145 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT-- 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLL 177
+ EIS +R+V A+ EL ++G+ GLVAG+ MDI SEG D V L LE IH+HKTA LL
Sbjct: 203 TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLL 262
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A V G IIGGG+ E+E VRK+ARCIGLLFQVVDDILD TKSS+ELGKTAGKD ++ K
Sbjct: 263 ETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLTGK 322
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYPKLMG+E +++F L A + L F + APL L +IA+R
Sbjct: 323 LTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 371
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/293 (62%), Positives = 229/293 (78%), Gaps = 6/293 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M K+K VN+ LDE V L P KI EAMRY+LL+GGKRVRP+LC+A+CELVGG ES+AM
Sbjct: 64 MIRKSKSVNEVLDEAVPLCEPVLKIREAMRYTLLSGGKRVRPMLCLAACELVGGQESTAM 123
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEH-VA 118
P ACA+EMIH SL+ DDLPCMD+D+ RRGKPTNHKVFGE+ AILA DAL++LA +H V
Sbjct: 124 PCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIALAIKHTVE 183
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK----DVSLNELENIHLHKTA 174
+ S ++ P+RV+ AI E+ AVG+EGLVAG+ D+D EGK D L LE IH+HKTA
Sbjct: 184 STSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLEFIHIHKTA 243
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LLEAA V G I+GGG+ E+ER+R YARCIGL+FQVVDD+LDVTKSS+ELGKTAGKDL+
Sbjct: 244 ALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLI 303
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
S+K TYPK+MG+E +R++A L +A E L F+ +AAPL LA YI +RQ+
Sbjct: 304 SEKLTYPKVMGVEKSREYAEKLNREAREHLNMFDPDKAAPLLLLADYIVNRQN 356
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/291 (65%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+E A+P
Sbjct: 55 MIGKANSVNKALDSAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEFLALP 114
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP FGED A+LAGDALLS AFEH+A +
Sbjct: 115 AACAVEMIHTMSLIHDDLP----------------FFGEDVAVLAGDALLSFAFEHLATE 158
Query: 121 STEI-SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKL 176
+ EI SP RVVRAI EL A+GSEGLVAG+++D+ SEG DV L LE IHLHKTA L
Sbjct: 159 TPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHLHKTAVL 218
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V G I GGG E+ER+RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++D
Sbjct: 219 LEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIAD 278
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYPKLMG+E ++ FA LL+ A E+L F+ + PL LA YI RQ+
Sbjct: 279 KLTYPKLMGLEKSKDFAEKLLSDAQEQLHGFDSNKVKPLLALANYIGKRQN 329
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 234/288 (81%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +KAK VN ALD+ V +++P KI EAMRYSLLAGGKRVRP LCIA+CELVGG+E AMP
Sbjct: 45 LRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEDLAMP 104
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EM+HTMSL+HDDLPCMD+DD RRGKPTNHK FGEDTA+LAGDALL+ AFEH+A
Sbjct: 105 SACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAFEHIARA 164
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+T + DRV+R IA LG AVGSEGLVAG+I+DI SEG + V L LE +H HKTA LLE+
Sbjct: 165 TTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYVHTHKTAVLLES 224
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G I+GG + E+ R+ YAR +GLLFQVVDDILDVTKSS ELGKTAGKDLV+DKAT
Sbjct: 225 AVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLVADKAT 284
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E +R FA +L+ +A ++L+ F+ + APL LA YIA RQ+
Sbjct: 285 YPKLLGLEKSRAFAEELIRKAKDQLSVFDQQKVAPLLGLADYIAYRQN 332
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 221/291 (75%), Gaps = 18/291 (6%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ KA VNKALD V LR P KIHEA RYSLLAGGKRVRPVLCIA+CELVGG+ES A P
Sbjct: 17 IIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLAXP 76
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+E IHT SL+HDDLPC DNDD RRGKPTNHKV+GED A+LAGDALLS AFEH+A A
Sbjct: 77 AACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASA 136
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+E+SP RVVRA+ EL A+G+EGLVAG+++DI SEG D V L L+ IHLHKTA L
Sbjct: 137 TSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAAL 196
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEA+ V G IIGGG+ E+ER+RK+ARCIGLLFQVVDDILDVTKSS
Sbjct: 197 LEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSS-------------- 242
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYPKL G+E +R+FA L +A ++L F+ + APL LA YIA+RQ+
Sbjct: 243 KLTYPKLXGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 293
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 221/289 (76%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VNKAL+E + + P KIHEAMRY++LA GKRVRP+LC+ASCELVGG E++AMP
Sbjct: 86 MMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMP 145
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKV+GE AIL+G ALLSLAFEH+
Sbjct: 146 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT-- 203
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLL 177
+ EIS +R+V A+ EL ++G+ GLVAG+ MDI SEG D V L LE IH+HKTA LL
Sbjct: 204 TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLL 263
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A V G IIGGG+ E+E VRK+ARCIGLLFQVVDDILD TKSS+ELGKTAGKD ++ K
Sbjct: 264 ETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGK 323
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYPKL+G+E +++F L A + L F + APL L +IA+R
Sbjct: 324 LTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 372
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 221/289 (76%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VNKAL+E + + P KIHEAMRY++LA GKRVRP+LC+ASCELVGG E++AMP
Sbjct: 89 MMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMP 148
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKV+GE AIL+G ALLSLAFEH+
Sbjct: 149 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT-- 206
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLL 177
+ EIS +R+V A+ EL ++G+ GLVAG+ MDI SEG D V L LE IH+HKTA LL
Sbjct: 207 TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLL 266
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A V G IIGGG+ E+E VRK+ARCIGLLFQVVDDILD TKSS+ELGKTAGKD ++ K
Sbjct: 267 ETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGK 326
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYPKL+G+E +++F L A + L F + APL L +IA+R
Sbjct: 327 LTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 375
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/285 (64%), Positives = 234/285 (82%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALDE + ++ P KIHEAMRYSLLAGGKRVRP+LC+A+CELVGG++ +AM AC
Sbjct: 79 KAICVNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAAC 138
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMD+DD RRGKPTNHKV+GED A+LAGDALL+ AFE++A +T
Sbjct: 139 AVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATTG 198
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVV 182
+ P R++ A+AEL +VG+EGLVAG++ D+ G +V L LE IH+HKTA LLEA+VV
Sbjct: 199 VPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVV 258
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG EV+++R++A+CIGLLFQVVDDILDVTKSS ELGKTAGKDL DK TYPK
Sbjct: 259 IGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPK 318
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A++FA +L +A ++LA F+ +AAPL LA YIA+RQ+
Sbjct: 319 LLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 210/250 (84%), Gaps = 1/250 (0%)
Query: 16 VQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVH 75
V L+ P KIHE+MRYSLLAGGKRVRP+LCIA+CELVGG+ES+AMP ACA+EMIHTMSL+H
Sbjct: 2 VLLQEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLMH 61
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DDLP MDNDD RRGKPTNHK+FGED +LAGDALL+ AFEH+A + + +R+VR I E
Sbjct: 62 DDLPFMDNDDLRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATKGVPSERIVRVIGE 121
Query: 136 LGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L +GSEGLVAG+++DI SEG DV L+ LE IH+HKTA LLE +VV G I+GG N E
Sbjct: 122 LAKCIGSEGLVAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGANDQE 181
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
VE++RK+ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK TYPKL+GI+ +++FA
Sbjct: 182 VEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLLADKTTYPKLIGIDKSKEFAE 241
Query: 255 DLLAQATEEL 264
L +A E+L
Sbjct: 242 KLNREAQEQL 251
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 219/289 (75%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VNKAL+E + + P KIHEAMRY++LA GKRVRP+LC+ASCELVGG E++ +P
Sbjct: 91 MMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENATIP 150
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT KV+GE AIL+G ALLSLAFEH+
Sbjct: 151 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLAFEHMT-- 208
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLL 177
+ EIS +R+V A+ EL ++G+ GLVAG+ MDI SEG D V L LE IH+HKTA LL
Sbjct: 209 TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLL 268
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A V G IIGGG+ E+E VRK+ARCIGLLFQVVDDILD TKSS+ELGKTAGKD ++ K
Sbjct: 269 ETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGK 328
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYPKL+G+E +++F L A + L F + APL L +IA+R
Sbjct: 329 LTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 377
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/285 (64%), Positives = 231/285 (81%), Gaps = 1/285 (0%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VN+ALDE + ++ P IHEAMRYSLLAGGKRVRP+LC A+CELVGG++ +AM AC
Sbjct: 79 KAICVNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAAC 138
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLPCMD+DD RRGKPTNHKV+GED A+LAGDALL+ AFE++A +
Sbjct: 139 AVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATIG 198
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVV 182
+ P R++ A+AEL +VG+EGLVAG++ D+ G +V L LE IH+HKTA LLEA+VV
Sbjct: 199 VPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVV 258
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG EV+++R++ARCIGLLFQVVDDILDVTKSS ELGKTAGKDL DK TYPK
Sbjct: 259 IGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPK 318
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A++FA +L +A ++LA F+ +AAPL LA YIA+RQ+
Sbjct: 319 LLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/289 (62%), Positives = 230/289 (79%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++++A VN ALD + P ++ E+MRYS+LAGGKRVRPVL +A+CELVGGD ++A P
Sbjct: 26 LSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAAATP 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VACA+EMIHTMSL+HDD+PCMD+D RRG+P+NH FGE TA+LAGDAL +LAFEHVA
Sbjct: 86 VACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARG 145
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ + DR +RA+AELGSA G+ G+ AG++ D +SEG VSL LE IH+HKTA+LLE
Sbjct: 146 CGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLE 205
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA V G I+GGG EVERVR+YARC+GLLFQVVDD+LD+T +S++LGKTAGKD+ +DKA
Sbjct: 206 AAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKA 265
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKL+G++ AR++A DLLA A EL F+ RAAPL HLA +IA RQH
Sbjct: 266 TYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 314
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ +N+ALDE + L P IH+AMRY++LAGGKRVRP+LC+A+CELVGG+E A+
Sbjct: 85 MISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQ 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKVFGE AIL+G ALL+LAFEH+
Sbjct: 145 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT-- 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
++S ++VRA+ EL ++G++GLVAG+ D+ SEG DV L +LE IH+HKT LL
Sbjct: 203 EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLL 262
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ V G +IGGG E+E+VR +ARCIGLLFQVVDDILD TKSS+ELGKTAGKD V+ K
Sbjct: 263 EASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGK 322
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPK++G+E +++F L A E L F+ + PL L +IA+R H
Sbjct: 323 LTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ +N+ALDE + L P IH+AMRY++LAGGKRVRP+LC+A+CELVGG+E A+
Sbjct: 85 MISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQ 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKVFGE AIL+G ALL+LAFEH+
Sbjct: 145 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT-- 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
++S ++VRA+ EL ++G++GLVAG+ D+ SEG DV L +LE IH+HKT LL
Sbjct: 203 EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLL 262
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ V G +IGGG E+E+VR +ARCIGLLFQVVDDILD TKSS+ELGKTAGKD V+ K
Sbjct: 263 EASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGK 322
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPK++G+E +++F L A E L F+ + PL L +IA+R H
Sbjct: 323 LTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/289 (62%), Positives = 230/289 (79%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++++A V+ ALD + P ++ E+MRYS+LAGGKRVRPVL +A+CELVGGD ++A P
Sbjct: 88 LSARADAVHDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAAATP 147
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VACA+EMIHTMSL+HDD+PCMD+D RRG+P+NH FGE TA+LAGDAL +LAFEHVA
Sbjct: 148 VACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARG 207
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ + DR +RA+AELGSA G+ G+ AG++ D +SEG VSL LE IH+HKTA+LLE
Sbjct: 208 CGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLE 267
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA V G I+GGG EVERVR+YARC+GLLFQVVDD+LD+T +S++LGKTAGKD+ +DKA
Sbjct: 268 AAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKA 327
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKL+G++ AR++A DLLA A EL F+ RAAPL HLA +IA RQH
Sbjct: 328 TYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 376
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 221/290 (76%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KA+ +N+ALDE + L P IH+AMRY++LAGGKRVRP+LC+A+CELVGG+E A+
Sbjct: 85 MINKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQ 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKVFGE AIL+G ALL+LAFEH+
Sbjct: 145 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT-- 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
++S ++VR + EL ++G++GLVAG+ MD+ SEG DV L +LE IH+HKT LL
Sbjct: 203 EADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEYIHVHKTGALL 262
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ V G +IGGG+ E+E+VR +ARCIGLLFQVVDDILD TKSS+ELGKTAGKD V+ K
Sbjct: 263 EASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSEELGKTAGKDQVAGK 322
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPK+MG+E +++F L +A E + F+ + PL L +IA+R +
Sbjct: 323 LTYPKVMGLEKSKEFVKKLKREAKEHIQGFDSDKVKPLIALTNFIANRNN 372
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 216/287 (75%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K K VN+ALD V LR P K HEAMRYSLL+ GKRV PVLCIA+CELVGG ES+AMP
Sbjct: 85 MHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEGKRVCPVLCIAACELVGGQESTAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC +EM+H M ++HDDLPCMDND RRGK +NHKVFGE+ +LAG +L++LAFEH+A
Sbjct: 145 AACGMEMVHAMCMMHDDLPCMDNDTLRRGKLSNHKVFGENVTVLAGYSLVALAFEHMATA 204
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P +VRAI EL +G EG AG+++D+ S GK D L ELE IH HKTA EA
Sbjct: 205 TQGVHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSDTGLEELEYIHRHKTADFAEA 264
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
A + G ++GG E+ R+RK+++CIGLLFQVVDDILDVTKSS++LGKTAGKDL+++K T
Sbjct: 265 AAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDVTKSSEQLGKTAGKDLLANKLT 324
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YPK++GIE ++++A +L +A E+L F+ +AAPL +A ++ RQ
Sbjct: 325 YPKMIGIEKSKEYAQNLSKEAKEQLVGFDPEKAAPLLAMADFVLHRQ 371
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 218/290 (75%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ +N+ALD+ + L P I++AMRY++ AGGKRVRP+LC+A+CELVGG E SA+P
Sbjct: 116 MIRKAETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGGERSAIP 175
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC++EMIHTMSL+ DDLPCMDNDD RRGKPT HKVFGE AIL+G ALL+LAFEH+
Sbjct: 176 AACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT-- 233
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
++S ++VR + EL ++G++GLVAG+ MD+ SEG D L +LE IH+HKT LL
Sbjct: 234 EADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHVHKTGALL 293
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ V G +IGGG+ E+E+VR +ARCIGLLFQVVDDILD TKSS+ELGKTAGKD V+ K
Sbjct: 294 EASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGK 353
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP+++G+E +++F L A E L F+ + PL L +IA+R +
Sbjct: 354 LTYPRVIGLEKSKEFVKKLNRDAREHLQGFDEDKVKPLIALTNFIANRNN 403
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/291 (63%), Positives = 228/291 (78%), Gaps = 5/291 (1%)
Query: 1 MTSKAKRVNKALD-ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M KA+ VN ALD V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAM 129
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKVFGED A+LAGDALL+LAFEH+
Sbjct: 130 SAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTV 189
Query: 120 KSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE---GKDVSLNELENIHLHKTAK 175
S+ ++ +R++RA+ EL A+G++GLVAG+++D+ SE DV L LE IHLHKTA
Sbjct: 190 VSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAA 249
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEAA V G I+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMA 309
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K TYP+L+G+E +R+ A L +A E+L FE +AAPL LA YI+ R
Sbjct: 310 GKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYISCRN 360
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/294 (61%), Positives = 230/294 (78%), Gaps = 8/294 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M K VN+ALD V LR P K+HEAMRY+LLAGGKR+RPVLC+A+C LVGG E++A+P
Sbjct: 51 MLDKINTVNRALDAAVALREPRKLHEAMRYTLLAGGKRIRPVLCLAACSLVGGSEATAIP 110
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPT+HK+FGE A+LAGDALL+LAFEHVAA
Sbjct: 111 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEHVAVLAGDALLALAFEHVAAS 170
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-------LENIHLHKT 173
+ RVVRAI EL +G+EG++AG+++D++SEG +S+++ LE IH+HKT
Sbjct: 171 TEGAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLTLSMSDEVAVLERLEFIHVHKT 230
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A ++E AVV G I+GGG+ E+ER+R + RCIGLL QVVDD+LDVTKSS+ELGKTA KDL
Sbjct: 231 A-VVEGAVVMGAILGGGSDEEIERLRMFGRCIGLLGQVVDDVLDVTKSSEELGKTAKKDL 289
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
V+DK TYPK++GI +++FA L+ A + LA F +AAPL+ L YIA RQ+
Sbjct: 290 VADKLTYPKVLGIHESKEFAHKLVHDANKMLAGFHPPKAAPLFALTNYIAYRQN 343
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 232/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +KAK VN ALD +V LR P + EA+RYSLLAGGKRVRP+LCIASCELVGG+E++AMP
Sbjct: 70 MINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIASCELVGGNEATAMP 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKVFGED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE---GKDVSLNELENIHLHKTAKL 176
S+ + P+R++RA+AEL A+G+ GLVAG+++D+ SE D L LE IHLHKTA L
Sbjct: 190 SSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLERLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDILDVT+S++ELGKTAGKDL++
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTEELGKTAGKDLMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E++ F+ +APL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSREVAEKLRKEAEEQVLGFDSENSAPLVALASYIACRHN 360
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/288 (57%), Positives = 214/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V AL+ ++ + P KI+EAMRYSLLAGGKR+RP+LC+A+CEL GG AMP
Sbjct: 23 LEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGGKRLRPILCLATCELTGGTTEMAMP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VAA+
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVAAQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P R++ IA LG VG+ GLV G+++D++SEGK D+S++ L IH HKT LLE
Sbjct: 143 TQNVPPQRILDVIARLGRTVGAAGLVGGQVLDLESEGKSDISVDTLTFIHTHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G ++ G + E++R+ KYA+ IGL FQ+VDDILD+T + +ELGKTAGKDL + KAT
Sbjct: 203 SVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDITATQEELGKTAGKDLQAQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E +RK A L+ A ELA + A PL +A YI +R+H
Sbjct: 263 YPSLWGLEESRKQAQQLVDAAIAELASYGEG-AEPLRAIASYIVTRKH 309
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/289 (56%), Positives = 221/289 (76%), Gaps = 2/289 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +K +N+ALD V L P K+HEAMRY+LL+GGKRVRP++CIA+CELVGG ES+ MP
Sbjct: 50 MINKITSINEALDSAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAACELVGGHESTVMP 109
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA EMIH+MS++ DDLPCMDNDDFRRGK +NH+V+GE +LA +L +LA +HV
Sbjct: 110 TACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVRSLQALAVDHVVTA 169
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD--VSLNELENIHLHKTAKLLE 178
+ + P+R+VRA+ E+ GS+G AG+I D+ S G+D VS+ +LE+IH+ KT L E
Sbjct: 170 TRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQLEHIHMQKTGTLCE 229
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G IIGG + E+E++RK+++CIGL+FQ+VDD+LDVTKSS ELGK AGKD+V+ KA
Sbjct: 230 GSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTKSSMELGKPAGKDVVAAKA 289
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP+L+GIE +R+ A L ++A E+L+ F+ +AAPL LA YI +RQ+
Sbjct: 290 TYPRLIGIEKSRELALKLNSEAKEQLSGFDQEKAAPLIALADYIVARQN 338
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/278 (60%), Positives = 211/278 (75%), Gaps = 1/278 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD + P + E+MRYSLLAGGKR+RP+LC+A+CELVGGD S AMP A ALEM
Sbjct: 37 VEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEM 96
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALLS AFE V+ +S + P+
Sbjct: 97 IHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVSLRSPGVPPE 156
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R+++ +AEL G+ GLV G+++D++SEG++V L LE IHLHKTA LL A VV G +I
Sbjct: 157 RLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALI 216
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
GG + +VE +R YA IGL FQ+VDDILDVT SS+ LGKTAGKDL++DK TYPKL+G+E
Sbjct: 217 GGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGLE 276
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+R A +L+AQA L + ++A PL LA Y+ASR
Sbjct: 277 PSRARALELVAQAKSALEPW-TSKAQPLLALADYVASR 313
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/297 (63%), Positives = 228/297 (76%), Gaps = 10/297 (3%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN+ALD V PA +H+AMRY+LLAGGKRVRP LC+A+C +VGG E AM
Sbjct: 71 MGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEPWAM 130
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+LAGDALLSL+F H+A+
Sbjct: 131 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMAS 190
Query: 120 KST-------EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
+ E P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 191 VGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPLERLEYIHL 250
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G IIGGG ++ER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 251 HKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 310
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KDL SDK TYPKL+G+E +R+FA +LL+ A E+LA F+ +AAPL HLA YIA RQ+
Sbjct: 311 KDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLANYIAHRQN 367
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 218/290 (75%), Gaps = 3/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ KA +VN+ALD+ V +++P IHEAMRYSLLAGGKRVRP+LCIA+CELVGG+ES+++P
Sbjct: 78 LIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAACELVGGEESNSVP 137
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKP-TNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EMIHTMSL+HDDLPC D RRGK K ED A+LAGD+LL+ +FE++A
Sbjct: 138 AACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSLLAFSFEYIAT 197
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMD--IDSEGKDVSLNELENIHLHKTAKLL 177
+ +SP + + ++G+EGLVAG++ D I+ E + L++LE IH+HKTA LL
Sbjct: 198 ATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQLEFIHIHKTAALL 257
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EAAVV G I+GGGN EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGK K
Sbjct: 258 EAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKRSCGGK 317
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG++ AR+FA L A +L+ F+ +AAPL LA YIA RQ+
Sbjct: 318 TTYPKLMGLDGAREFADKLNKDAKNQLSEFDREKAAPLLALADYIAYRQN 367
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/285 (57%), Positives = 218/285 (76%), Gaps = 5/285 (1%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ +AL ++V +P ++HE+MRYSLLAGGKR+RP L IA+CE+VGG + MP ACALEM
Sbjct: 92 IEQALSDSVPTIYPERLHESMRYSLLAGGKRIRPCLAIAACEMVGGAQEVVMPTACALEM 151
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDDFRRG PTNHKV+GE+ AILAGDALLS AFE++A ++ + +
Sbjct: 152 IHTMSLIHDDLPMMDNDDFRRGVPTNHKVYGEEMAILAGDALLSHAFEYIARETKGVPAE 211
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDS-----EGKDVSLNELENIHLHKTAKLLEAAVV 182
+++R IA++G VGSEGLV G+++DI+S EGK VSL L+ IH HKT LLE AVV
Sbjct: 212 KILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEGKPVSLETLKYIHAHKTGALLETAVV 271
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GGG ++ER+ KYA IGL FQVVDDILD T +S+ELGKTAGKD+ KATYP
Sbjct: 272 SGAILGGGTEEDIERLGKYAYDIGLAFQVVDDILDCTATSEELGKTAGKDVAVGKATYPS 331
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E +++ A +L+ A E+L+ ++ +AAPL LA YI +R++
Sbjct: 332 LLGLEESQRIADELIKSAKEQLSVYDQKKAAPLIGLADYIKNRKN 376
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/287 (57%), Positives = 216/287 (75%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + ++V +AL + +P +I+EAMRYSLLAGGKR+RP+LC+A+CEL GG AMP
Sbjct: 12 LSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGSVEQAMP 71
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHKVFGED AILAGDALL+ AFEH+A++
Sbjct: 72 TACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYAFEHIASQ 131
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ + P V++ IA +G AV + GLV G+++D++SEGK +SL LE IH HKT LLEA+
Sbjct: 132 TRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEAS 191
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+ G + + R+ YAR IGL FQ+VDDILDVT +S++LGKTAGKD + KATY
Sbjct: 192 VVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQAAAKATY 251
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P L+G+E +R+ A +L+ A E L + ++A PL LA +I RQH
Sbjct: 252 PSLLGLEASRQKAEELIQSAKEALRPYG-SQAEPLLALADFITRRQH 297
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 217/283 (76%), Gaps = 3/283 (1%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ +ALD +V + +P ++ E+MRYSLLAGGKR+RP LC+A+CELVGG AMP ACALEM
Sbjct: 30 IERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGTMEVAMPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDDFRRGKPTNHKV+GE+ AILAGDALLS AFE++ ++ +S D
Sbjct: 90 IHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGVSAD 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLLEAAVVCG 184
+V+R I ++G VGSEGLV G+++DI SEG D V+++ L+ IH HKT LLE +V G
Sbjct: 150 KVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYIHAHKTGALLEVSVTAG 209
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+GG + ++ ++ +YA+ IGL FQVVDDILD T +S+ELGKTAGKD+ K+TYP L+
Sbjct: 210 AILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELGKTAGKDMAVGKSTYPSLV 269
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+E +++ A DL+++A +EL F+ + PL LA YI +R++
Sbjct: 270 GMEESKRIAADLISKAKQELEGFDPVKVKPLIGLADYIQNRKN 312
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 215/287 (74%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + ++V +AL + +P +I+EAMRYSLLAGGKR+RP+LC+A+CEL GG A+P
Sbjct: 12 LSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGTVEQALP 71
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHKVFGED AILAGDALL+ AFEH+A++
Sbjct: 72 TACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFEHIASQ 131
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ + P V++ IA +G AV + GLV G+++D++SEGK +SL LE IH HKT LLE +
Sbjct: 132 TQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEVS 191
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+ GG+ + + +YAR IGL FQ+VDDILD+T +S++LGKTAGKD + KATY
Sbjct: 192 VVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQAAAKATY 251
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P L+G+E +R+ A +L+ A E L + RA PL LA +I RQH
Sbjct: 252 PSLLGLEASRQKAEELIQSAKETLRPYG-PRAEPLLALADFITRRQH 297
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 215/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + + + ALD + + +P KI+EAMRYSLLAGGKR+RP+LC+ASCEL GG S AMP
Sbjct: 22 LVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGGKRLRPILCLASCELAGGTTSMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE +A K
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLTYAFEFIATK 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P +V++ IA L A G+ GLV G+++D++SEGK DVSL L IH HKT LLEA
Sbjct: 142 TQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIHAHKTGALLEA 201
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G + +++R+ ++A+ IGL FQ++DDILD+T + +ELGKTAGKD+ + K T
Sbjct: 202 CVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTAGKDVQAGKVT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE +R+ A L+A A ++LA F ++A PL +A +I SR +
Sbjct: 262 YPSLWGIEESRRQASQLVADAKDQLAVFG-SKALPLLAIADFITSRSN 308
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/288 (57%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + V +ALD ++ + +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL GG AMP
Sbjct: 1 MAERKAEVEQALDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
AC+LEMIHTMSL+HDDLP MDNDD+RRG+ TNHKV+GED AILAGD LLS AFE VA +
Sbjct: 61 TACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQ 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+T + P +V+ I LG AVG+ GLV G+++D++SEGK D++ +L IH HKT LLEA
Sbjct: 121 TTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEA 180
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VV G I+ G + ER+ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKDL + KAT
Sbjct: 181 CVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKAT 240
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E +++ A L+A+A ELA F A A PL LA +I SR +
Sbjct: 241 YPSLWGLEESKRRANQLIAEAQAELAPFGEA-ATPLVALAQFITSRSN 287
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 219/293 (74%), Gaps = 8/293 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +KAK VNKAL+E V LR P KI EAMRY+LL+ GKRVRP+LC+A+CELVGG ES+AM
Sbjct: 54 MVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAM 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EM+H SL+ DDLPCMDND RRGKPTNH VFGE AILA AL++LA + +
Sbjct: 114 SAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS 173
Query: 120 KS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG----KDVSLNELENIHLHKTA 174
+ ++ P+R+++ + E+ AV EGLVAG+ D+ EG D L LE IH+HKTA
Sbjct: 174 STFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTA 231
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LLEAA V G I+GGG+ E+ER+R YARCIGL+FQVVDD+LDVTKSS+ELGKTAGKDL+
Sbjct: 232 ALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLI 291
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ K TYP+LMG+E ++++A L +A E L F++ + APL LA YI +RQ+
Sbjct: 292 AGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 219/293 (74%), Gaps = 8/293 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +KAK VNKAL+E V LR P KI EAMRY+LL+ GKRVRP+LC+A+CELVGG ES+AM
Sbjct: 54 MVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAM 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EM+H SL+ DDLPCMDND RRGKPTNH VFGE AILA AL++LA + +
Sbjct: 114 SAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS 173
Query: 120 KS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG----KDVSLNELENIHLHKTA 174
+ ++ P+R+++ + E+ AV EGLVAG+ D+ EG D L LE IH+HKTA
Sbjct: 174 STFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTA 231
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LLEAA V G I+GGG+ E+ER+R YARCIGL+FQVVDD+LDVTKSS+ELGKTAGKDL+
Sbjct: 232 ALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLI 291
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ K TYP+LMG+E ++++A L +A E L F++ + APL LA YI +RQ+
Sbjct: 292 AGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 225/296 (76%), Gaps = 10/296 (3%)
Query: 1 MTSKAKRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN+ALD + PA +H+AMRY+LLAGGKRVRP LC+A+C +VGG ES AM
Sbjct: 145 MEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPESWAM 204
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+LAGDALLSL+F H+A
Sbjct: 205 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMAS 264
Query: 119 ------AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
A E P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 265 VGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHL 324
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G IIGGG ++E +RKYAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 325 HKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 384
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KDL SDK TYPKL+G+ +R+FA L++ ATE+LA F+ +AAPL HLA YIA RQ
Sbjct: 385 KDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAHRQ 440
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/284 (56%), Positives = 218/284 (76%), Gaps = 3/284 (1%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
++ +ALD +V + +P ++ E+MRYSLLAGGKR+RP LC+A+CELVGGD +AMP ACALE
Sbjct: 62 KIERALDASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMPTACALE 121
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDDFRRGKPTNHKV+GE+ AILAGDALLS AFE++ ++ S
Sbjct: 122 MIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGASA 181
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLLEAAVVC 183
++V+R I ++G VGSEGLV G+++DI SEG ++V+++ L+ IH HKT LLE +V
Sbjct: 182 EKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVTA 241
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+GG + ++ ++ +YA+ IGL FQVVDDILD T SS+ELGKTAGKD+ K TYP L
Sbjct: 242 GAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEELGKTAGKDVAVGKTTYPSL 301
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G+E +++ A DL+++A EL F+ + PL LA YI +R++
Sbjct: 302 VGMEESKRIAADLISKAKAELEGFDPVKVRPLIGLADYIQNRKN 345
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/289 (56%), Positives = 218/289 (75%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K ALD+ + + +P KI+E+MRYSLLAGGKR+RP+LC+A+CE++GG S AMP
Sbjct: 22 LQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGGTISMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRG+ TNHKV+G+D AILAGD LL+ AFE VA +
Sbjct: 82 TACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAFEFVATQ 141
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ E +S +RV++ IA LG A+G+ GLV G+++D+DSEGK D+SL L IH HKTA LLE
Sbjct: 142 TPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+VVCG I+ G + V+R+ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL++ K
Sbjct: 202 ASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGKDLIAKKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+ A +EL F A PL LA+YI SR H
Sbjct: 262 TYPSLWGIEESRSKAQQLVEAACKELETFG-QLAQPLNALAHYITSRNH 309
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/278 (59%), Positives = 211/278 (75%), Gaps = 1/278 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ++LD + P + E+MRYSLLAGGKR+RP+LC+A+CELVGGD S AMP A ALEM
Sbjct: 34 VEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEM 93
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALLS AFE VA +S + P+
Sbjct: 94 IHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVAVRSEGVPPE 153
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R+++ +AEL G+ GLV G+++D++SEG++V L LE IHLHKTA LL A VV G +I
Sbjct: 154 RLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALI 213
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
GG + +V+ +R YA IGL FQ+VDDILDVT SS LGKTAGKDL++DK TYPKL+G+E
Sbjct: 214 GGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTYPKLLGLE 273
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+R A +L+AQA L ++ +A PL LA Y+ASR
Sbjct: 274 PSRARALELVAQAKAVLEPWK-DKAQPLLALADYVASR 310
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/289 (56%), Positives = 218/289 (75%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K N ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LC+A+CE++GG AMP
Sbjct: 22 LKERQKLCNTALDQSIPVVYPEKIYESMRYSLLAGGKRIRPILCLAACEMMGGTIDMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GE+ AILAGD LL+LAFE A +
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGENIAILAGDGLLALAFEFPATQ 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ P +RV++ IA LG A+G+ GLV G+++D+DSEGK D+SL L IH HKTA LLE
Sbjct: 142 TPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDSEGKLDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+VVCG ++ G + +++R+ +YA+ IGL FQ++DDILD+T + ++LGKTAGKDL + K
Sbjct: 202 ASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILDITATLEQLGKTAGKDLTAKKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+ A ELA F +A PL +A+YI SR H
Sbjct: 262 TYPSLWGIEESRSKATQLVEAACAELAPFG-EKALPLQAIAHYIVSRNH 309
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 225/296 (76%), Gaps = 10/296 (3%)
Query: 1 MTSKAKRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN+ALD + PA +H+AMRY+LLAGGKRVRP LC+A+C +VGG ES AM
Sbjct: 65 MEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPESWAM 124
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+LAGDALLSL+F H+A
Sbjct: 125 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMAS 184
Query: 119 ------AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
A E P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 185 VGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHL 244
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G IIGGG ++E +RKYAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 245 HKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 304
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KDL SDK TYPKL+G+ +R+FA L++ ATE+LA F+ +AAPL HLA YIA RQ
Sbjct: 305 KDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAHRQ 360
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 336 bits (862), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/276 (64%), Positives = 220/276 (79%), Gaps = 4/276 (1%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
+V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM ACA+EMIHT SL+
Sbjct: 8 SVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 67
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMDN D RRGKPTNHKVFGED A+LAGDALL+LAFEH+ S+ ++ +R++RA+
Sbjct: 68 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAV 127
Query: 134 AELGSAVGSEGLVAGEIMDIDSE---GKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG 190
EL A+G++GLVAG+++D+ SE DV L LE IHLHKTA LLEAA V G I+GGG
Sbjct: 128 VELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGG 187
Query: 191 NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++ K TYP+L+G+E +R
Sbjct: 188 TEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSR 247
Query: 251 KFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+ A L +A E+L FE +AAPL LA YI+ R
Sbjct: 248 EVAEKLSREAEEQLLGFESDKAAPLVALASYISCRN 283
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 336 bits (862), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 217/281 (77%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V AL+ ++ + +P KI+EAMRYSLLAGGKR+RP+LC+A+CE+ GG AMP ACALEM
Sbjct: 29 VEAALESSIIVTYPEKIYEAMRYSLLAGGKRLRPILCLATCEMAGGTVEMAMPTACALEM 88
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRG+ TNHKV+G+D AILAGD LL+ AFE++A ++ + P+
Sbjct: 89 IHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAFEYIATQTKNVPPE 148
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
RV+RAIA+LG AVG+ GLV G+++D++SEGK DV+ + L IH HKTA LLEA VV G +
Sbjct: 149 RVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSDVTADTLHFIHTHKTAALLEACVVSGGV 208
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G +++R+ +YA+ IGL FQ++DDILDVT +++ELGKTAGKDL + K TYP L GI
Sbjct: 209 LAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTATAEELGKTAGKDLQAQKVTYPSLWGI 268
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+A A EEL F +A PL LA +I +R++
Sbjct: 269 EESRRQAQALIATAKEELTPFS-EKAQPLIALADFITNRKN 308
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/289 (57%), Positives = 215/289 (74%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K ALD+ + + +P KI+E+MRYSLLAGGKRVRP+LC+A+CE+ GG AMP
Sbjct: 22 LKERQKLCETALDQAIPIIYPEKIYESMRYSLLAGGKRVRPILCLATCEMTGGTIDMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAFAFEFVAKQ 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ + P DRV+ +A LG A+G+ GLV G+++D++SEGK D SL L IH HKTA LLE
Sbjct: 142 TPQDVPRDRVLDVVARLGRALGAAGLVGGQVVDLESEGKSDTSLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+VVCG I+ G + +V+R+ +YA+ IGL FQ+VDDILD+T + ++LGKTAGKDL + K
Sbjct: 202 ASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDITATQEQLGKTAGKDLKAQKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A +L+ +A EL F + A PL +AYYI SR H
Sbjct: 262 TYPSLWGIEESRAKAQELVEEACVELESFGES-AQPLKAIAYYITSRNH 309
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 217/288 (75%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K V ALD ++ + +P KI+EAMRYSLLAGGKR+RP+LC+A+CE+ GG+ AMP
Sbjct: 25 LKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAGGKRLRPILCLATCEMTGGNTEIAMP 84
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LL+ AFE+VA
Sbjct: 85 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDGLLAYAFEYVATN 144
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P ++++ I+ LG AVG+ GLV G+++D++ EGK DVSL L IH HKTA LLEA
Sbjct: 145 TKNVPPTQILQVISRLGRAVGAAGLVGGQVVDLEMEGKTDVSLETLNFIHNHKTAALLEA 204
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VVCG I+ G + +++++++Y++ IGL FQ+VDDILD+T + ++LGKTAGKDL + K T
Sbjct: 205 SVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDITATQEQLGKTAGKDLEAQKVT 264
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A EL F +A PL LAY+I SR +
Sbjct: 265 YPSLWGLEESKKQAQLLVEAACAELEPFG-EQAKPLVALAYFITSRSN 311
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + +V ALD + + +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL GG A+P
Sbjct: 22 LQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTTEMAIP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRG TNHKV+GED AILAGD LL+ AFE+VAAK
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEYVAAK 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + RV++ I+ LG AVG+ GLV G+++D++SEGK DVS++ L IH HKTA LLEA
Sbjct: 142 TENVPAPRVLQVISRLGRAVGAAGLVGGQVVDLESEGKADVSIDTLNFIHNHKTAALLEA 201
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V CG I+ G +++R+ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKDL + KAT
Sbjct: 202 CVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDDILDITATQEELGKTAGKDLQAQKAT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP + G+E +++ A L+ A EL F +A PL +A +I SR H
Sbjct: 262 YPSIWGLEESQRQARQLIQAAIAELDSFG-EKALPLQAIAEFITSRTH 308
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 216/288 (75%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + +V ALD ++ + +P KI+EAMRYSL+AGGKR+RP+LC+A+CEL GG AMP
Sbjct: 22 LAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGGKRLRPILCLATCELTGGTVEMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFEHVA +
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILAGDGLLAYAFEHVAIE 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ ++P+R+++ +A LG AVG+ GLV G+++D++ EGK DVSL L IH HKTA LLEA
Sbjct: 142 TKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSLETLNFIHNHKTAALLEA 201
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+V G ++ G + +V+R+ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKDL + KAT
Sbjct: 202 SVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEELGKTAGKDLTAQKAT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP + G+E +R+ A L++ A EL F +A L +A +I +R H
Sbjct: 262 YPSIWGLEESRRQADKLISDAKSELGLFG-EKAIALVAIADFITARTH 308
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 215/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + KRV ALD ++ L +P I+EAMRYSLLAGGKR+RP+LC+A+CEL+GG + AMP
Sbjct: 20 LSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGGKRLRPILCLAACELMGGTTAQAMP 79
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+HTMSL+HDDLP MDNDD+RRG+ TNHKV+GED AILAGDALL+ AFEH+A
Sbjct: 80 TACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDVAILAGDALLTYAFEHIARY 139
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+T++ DRV+R IA+LG AVG+EGLV G+I+D+ SEG +V+++ L IH+HKT LLE
Sbjct: 140 TTDVPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEVTVDTLNYIHVHKTGALLEL 199
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+V G I+ G + + YA+ IGL FQ+VDD+LD+T +S+ELGK+AGKDL + KAT
Sbjct: 200 SVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITATSEELGKSAGKDLQAQKAT 259
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP GI+ +R+ A L+ +A + A +APL LA YI +R H
Sbjct: 260 YPSFWGIDESRRQAQQLIDEAKAAVLPLG-ADSAPLLALADYIVARTH 306
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/289 (56%), Positives = 217/289 (75%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K + ALD+ + + +P KI+EAMRYSLLAGGKRVRP+LC+A+ E++GG AMP
Sbjct: 22 LKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGGKRVRPILCLATSEMIGGTIEMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+LAFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLALAFEFVATQ 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ + P +R ++ IA LG A+G+ GLV G+++D+DSEGK D+SL L IH HKTA LLE
Sbjct: 142 TPQNVPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG +I G + +VE++ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL ++K
Sbjct: 202 ACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLKAEKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GI+ +R A L+ A ELA F +A PL +A+YI SR H
Sbjct: 262 TYPSLWGIDESRAKAQQLVESACVELASFG-EKALPLQAIAHYIVSRNH 309
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 218/287 (75%), Gaps = 2/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + + V ALD ++ + +P KI+EAMRYSL+AGGKR+RP+LC+A+CEL GG AMP
Sbjct: 30 LSQRRELVEAALDASIPVVYPEKIYEAMRYSLMAGGKRLRPILCLAACELAGGTIEMAMP 89
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHK +GED AILAGD LL+ A+EHVA +
Sbjct: 90 TACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYEHVAIQ 149
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ ++ P++V++ +A LG AV + GLV G+++D++SEG +DV+L+ L IH HKT LLEA
Sbjct: 150 TQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTGALLEA 209
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+V+ G + G N ++R K+AR IGL FQ++DD+LDVT +S++LGKTAGKD+ + KAT
Sbjct: 210 SVLSGAELAGANQDLLDRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAGKDVAAQKAT 269
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YP L GI +++ A L+ +A ELA + ++APL LA +I SRQ
Sbjct: 270 YPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITSRQ 315
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + + + ALD + + +P I+EAMRYSLLAGGKR+RP+LC+ASCEL GG S A+P
Sbjct: 22 LVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGGKRLRPILCLASCELAGGTTSMAIP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE +A K
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLTYAFEFIATK 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P +V++ IA L A G+ GLV G+++D++SEGK DVSL L IH HKT LLEA
Sbjct: 142 TQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIHAHKTGALLEA 201
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G + +++R+ ++A+ IGL FQ++DDILD+T + +ELGKTAGKD+ + K T
Sbjct: 202 CVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTAGKDVQAGKVT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE +R+ A L+A A +LA F ++A PL +A +I SR +
Sbjct: 262 YPSLWGIEESRRQASQLVADAKAQLAVFG-SKALPLLAIADFITSRSN 308
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/291 (63%), Positives = 232/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+ ++P+R++RA+ EL A+G+ GLVAG+++D+ SE + V L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +++ A L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/291 (63%), Positives = 232/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V L P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+ ++P++++RA+ EL A+G+ GLVAG+++D+ SE + V L LE IHLHKTA L
Sbjct: 190 SSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/289 (56%), Positives = 219/289 (75%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + + +ALD ++ + +P KI+EAMRYSLLAGGKRVRP+LC+A+ +++GG AM
Sbjct: 25 LKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGGKRVRPILCLATADMIGGTIEMAMA 84
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+LAFEHVAA+
Sbjct: 85 TACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALAFEHVAAQ 144
Query: 121 S-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ T + DRV++ I LG A+G+ GLV G+++D++SEGK D+SL L IH HKTA LLE
Sbjct: 145 TPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLESEGKSDISLETLNFIHNHKTAALLE 204
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG II G + +V+++ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL + K
Sbjct: 205 ACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDDILDITATQEQLGKTAGKDLTAQKV 264
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+AQA ELA + +A PL LA++I +R +
Sbjct: 265 TYPSLWGIEESRAKAQHLVAQACAELASYG-EKAIPLQALAHFIINRNN 312
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 213/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD+++ + P KI+E+MRYSLLAGGKR+RP+LC+A+C L GG AMP ACALEM
Sbjct: 31 VETALDQSLAIGIPEKIYESMRYSLLAGGKRLRPILCLATCRLTGGSTEMAMPTACALEM 90
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE+VA K+ ++P+
Sbjct: 91 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYAFEYVANKTDNVAPE 150
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG+ VG+EGLV G+++D++SEGK D++ L IH HKT LLE +VV G I
Sbjct: 151 NIIKVIARLGNTVGAEGLVGGQVLDLESEGKTDITAETLSFIHTHKTGALLETSVVTGAI 210
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + E+ ++ KY++ IGL FQ++DDILD+T + ++LGKTAGKDL + KATYP L G+
Sbjct: 211 LAGASAEEIIKLTKYSQNIGLAFQIIDDILDITATDEQLGKTAGKDLAAQKATYPSLWGL 270
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+A+A ++LA + A A PL +A +I +R H
Sbjct: 271 EKSQAEAEKLIAEALDQLASYGEA-AEPLRAIAKFIVTRNH 310
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 212/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + +V ALD ++ L +P KI+EAMRYSLLAGGKR+RP+LC+A+CELVGG AMP
Sbjct: 23 LKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGGKRLRPILCLATCELVGGTLEMAMP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LL+ AFE+VA +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAFEYVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + +V++ +A LG AVG+ GLV G+++D++SEG D+ L IH HKT LLEA
Sbjct: 143 TQNVPAHQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSDIQEETLTFIHTHKTGALLEA 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+GG E+ER+ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKDL++ KAT
Sbjct: 203 CVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDITATQEELGKTAGKDLLAQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE ++ A L+ A EL F +A PL +A +I +R H
Sbjct: 263 YPSLWGIEASKTKAQQLIDAAKAELELFG-EKAQPLLAIADFITTRTH 309
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 3/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KAK VN+ALD + LR P +IH+AMRYSLL GGKR+ P++CI++CELVGG ES+AMP
Sbjct: 91 MLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMP 150
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
V CA+EM+H +SL+ DDLPCMDNDD RRGKP+NHK FGE ILA DALL+LAFEHVA
Sbjct: 151 VVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLALAFEHVATM 210
Query: 121 ST--EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLL 177
ST + P V AI EL ++GS+GLVAG+ +D+ SEG ++ L LE+IH++K LL
Sbjct: 211 STVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLL 270
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ V G ++GGG+ ++E +RK+ RC+GLL+QVVDDILD+TKS++ELGKTAGKDLV+DK
Sbjct: 271 EASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADK 330
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKL+GIE +R+FA L A + L+ F+ +AA L + + RQ+
Sbjct: 331 VTYPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQN 380
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/291 (63%), Positives = 232/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+ ++P+R++RA+ EL A+G+ GLVAG+++D+ SE + V L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +++ A L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/288 (57%), Positives = 209/288 (72%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ K + V ALD + + +P KI+E+MRYSL+AGGKR+RP LC+A+CEL+GG AMP
Sbjct: 30 LSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCELLGGTVEMAMP 89
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LLS AFE VA +
Sbjct: 90 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAFEFVATQ 149
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + P+RV++ I LG AVG+ GLV G+++DI SEG DVS L IH HKT LLEA
Sbjct: 150 TQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFIHTHKTGALLEA 209
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G N ++ER+ +YA+ IGL FQ+VDDILD+T S++LGKTAGKDL + KAT
Sbjct: 210 CVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITAPSEQLGKTAGKDLEAQKAT 269
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E +R A L+ +A ELA F A L +A +I R H
Sbjct: 270 YPSLWGLEKSRAKAEQLVEEAKAELAAFGYGGKA-LAAIADFITYRSH 316
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 216/270 (80%), Gaps = 4/270 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM ACA+EMIHT SL+HDDLPC
Sbjct: 36 PLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPC 95
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAIAELGSA 139
MDN D RRGKPTNHKVFGED A+LAGDALL+LAFEH+ S+ ++ +R++RA+ EL A
Sbjct: 96 MDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARA 155
Query: 140 VGSEGLVAGEIMDIDSE---GKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
+G++GLVAG+++D+ SE DV L LE IHLHKTA LLEAA V G I+GGG E+E
Sbjct: 156 IGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIE 215
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++ K TYP+L+G+E +R+ A L
Sbjct: 216 KLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKL 275
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+A E+L FE +AAPL LA YI+ R
Sbjct: 276 SREAEEQLLGFESDKAAPLVALASYISCRN 305
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 231/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+ ++P+R++RA+ EL +G+ GLVAG+++D+ SE + V L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +++ A L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +ALD ++ + PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL GG A+P ACALEM
Sbjct: 41 VEQALDSSLPINQPAKIYEAMRYSLLAGGKRLRPILCLATCELTGGSNEMAIPTACALEM 100
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE+VA ++ + +
Sbjct: 101 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVATQTKNVPAE 160
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
R+V+ IA LG VG+EGLV G+++D++SEGK D+S L IH HKT LLEA+VV G I
Sbjct: 161 RIVKVIARLGRTVGAEGLVGGQVLDLESEGKSDISAETLTFIHTHKTGALLEASVVSGAI 220
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + ++ R+ KYA+ IGL FQ++DDILD+T + ++LGKTAGKDL + KATYP L GI
Sbjct: 221 LSGASEEDLARLSKYAQNIGLAFQIIDDILDITATDEQLGKTAGKDLQAQKATYPSLWGI 280
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+ +A +L + +A PL +A +I +R +
Sbjct: 281 EKSQHQAEKLINEAIAQLKPYG-NKAKPLEAIARFIVTRNN 320
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 216/291 (74%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K K + +AL ++V +P ++HE+MRYSLLAGGKR+RP LCIA+CEL+GG AMP
Sbjct: 53 IADKNKAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAMP 112
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHKV+GE+ AILAGDALLS AFE++ +
Sbjct: 113 TACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRE 172
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
+ + P +R +R + ++G VGSEGLV G+++DI SEG D V+L L+ IH HKT L
Sbjct: 173 TPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGAL 232
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LE +V G I+ G +VER+ KYA+ IGL FQVVDDILD T++S++LGKTAGKD
Sbjct: 233 LEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVG 292
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP L+G+E ++K A DL+ +A E L ++ AAPL LA +I +RQ+
Sbjct: 293 KATYPSLVGLEESKKIADDLITEAKELLRDYDPKLAAPLLGLADFIKNRQN 343
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/288 (56%), Positives = 208/288 (72%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ K + V ALD + + +P KI+E+MRYSL+AGGKR+RP+LC+A+CEL+GG AMP
Sbjct: 30 LSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCELLGGTVEMAMP 89
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LLS AFE VA +
Sbjct: 90 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQ 149
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + P+RV++ I LG AVG+ GLV G+++D+ SEG D+S L IH HKT LLEA
Sbjct: 150 TQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFIHTHKTGALLEA 209
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G N ++ER+ +YA+ IGL FQ+VDDILD+T S ELGKTAGKDL + KAT
Sbjct: 210 CVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELGKTAGKDLEAQKAT 269
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E +R A L+ +A EL F A L +A +I R H
Sbjct: 270 YPSLWGLEKSRAKAQQLVEEAKAELQAFGNGGCA-LAAIADFITYRSH 316
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 217/287 (75%), Gaps = 2/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + + V ALD ++ + +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL GG AMP
Sbjct: 15 LSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLAACELAGGTIEMAMP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHK +GED AILAGD LL+ A+EHVA +
Sbjct: 75 TACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYEHVAIE 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ ++ P++V++ +A LG AV + GLV G+++D++SEG +DV+L+ L IH HKT LLEA
Sbjct: 135 TQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTGALLEA 194
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+V+ G + G + + R K+AR IGL FQ++DD+LDVT +S++LGKTAGKD+ + KAT
Sbjct: 195 SVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAGKDVAAQKAT 254
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YP L GI +++ A L+ +A ELA + ++APL LA +I SRQ
Sbjct: 255 YPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITSRQ 300
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 164/289 (56%), Positives = 218/289 (75%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LC+A+CE++GG AMP
Sbjct: 22 LKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGGKRLRPILCLATCEMMGGTIEMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRG TNHKV+GED AILAGD LL+ AFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFELVATQ 141
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ E ++ +RV++ IA LG A+G+ GLV G+++D+DSEGK D+SL L IH HKTA LLE
Sbjct: 142 TPESVTRERVLQVIARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG I+ G + +V+R+ +YA+ IGL FQ++DDILDVT + ++LGKTAGKDLV+ K
Sbjct: 202 ACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDVTATQEQLGKTAGKDLVAQKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L G+E +R A +L+ A EL F + A PL LA++I SR H
Sbjct: 262 TYPSLWGLEKSRAKAQELIEAACAELEPFGQS-AQPLQALAHFITSRNH 309
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/280 (58%), Positives = 212/280 (75%), Gaps = 1/280 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GG+ ++AMP A ALEM
Sbjct: 22 VELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGNVAAAMPTAVALEM 81
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRG+PTNHKV+GE TAILAGDALL+ AFE VA +S +SP+
Sbjct: 82 IHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAFEIVALRSPGVSPE 141
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
+++ I EL A G+ GLV G+++D++SEGK+V+L+ LE IHLHKT LL A V+CG +I
Sbjct: 142 CILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTGALLSACVICGGLI 201
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
G + ++ +R YAR IGL FQ++DDILDVT SS LGKTAGKDLV+DK TYPKL+G++
Sbjct: 202 GDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLVADKTTYPKLLGLK 261
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+R+ A L+A+A + L + RAAPL LA YI R
Sbjct: 262 ASRERAEQLVAEAKQGLDPWR-DRAAPLLALADYITGRDR 300
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 156/283 (55%), Positives = 217/283 (76%), Gaps = 2/283 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+ V ALD ++ + +P KI+E+MRYSL+AGGKR+RP+LC+A+ EL+GGD ++AMP ACA+
Sbjct: 26 QEVEAALDASISVTYPEKIYESMRYSLMAGGKRLRPILCLAAHELLGGDLAAAMPTACAM 85
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EM+HTMSL+HDDLP MDNDDFRRGKPTNHKV+G+D AILAGDALL+ AFE +A ++ +
Sbjct: 86 EMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIAILAGDALLAYAFEFIAVQTKGVP 145
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCG 184
+R+++AIA LG AV + GLV G+++D++ EGK DV+ L IH+HKTA LLE+ V+CG
Sbjct: 146 AERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVTAEILTFIHIHKTAALLESCVICG 205
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
++ G N +++R+ YA IGL FQ++DDILD+T +S++LGKTAGKDL + K TYP L
Sbjct: 206 ALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATSEQLGKTAGKDLAAQKVTYPSLW 265
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
GIE ++ A +L+ QA +L + A A PL LA YI +R++
Sbjct: 266 GIEASQLKAQELVEQAKAQLVSYGDA-ALPLMALADYITARKN 307
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 219/286 (76%), Gaps = 3/286 (1%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+ + + ALD+++ L +P KI+EAMRYSLLAGGKRVRP+LC+A+CE++GG AMP AC
Sbjct: 25 RQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIGMAMPTAC 84
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+L+FE VA ++ +
Sbjct: 85 AMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFEFVATQTPQ 144
Query: 124 -ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAV 181
+ PDR ++ IA +GSA G+ GLV G+++D+ SEG+ ++SL L IH HKTA LLEA+V
Sbjct: 145 TVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASV 204
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
VCG II G + +++++ Y++ IGL FQ++DDILD+T + ++LGKTAGKD+ S K TYP
Sbjct: 205 VCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTAGKDIESAKVTYP 264
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GIE +R A +L+ +A +L ++ +A PL +A++I +R H
Sbjct: 265 SLWGIEESRLKAQELVEEACAQLDFYG-DKAVPLQEIAHFIINRNH 309
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 160/281 (56%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD+++ ++ P+ I+EAMRYSLLAGGKR+RP+LC+ASCELVGG AMP ACALEM
Sbjct: 29 VEAALDQSLPIKPPSTIYEAMRYSLLAGGKRLRPILCLASCELVGGTVEMAMPTACALEM 88
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
+HTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LL AFE VA ++ +
Sbjct: 89 VHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLVYAFEVVATQTQNVPAP 148
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
RV++AIA L A G++G+V G+++DI EGK D ++ L IH HKT LLEA VVCG I
Sbjct: 149 RVLKAIAHLAHAFGADGVVGGQVVDIQCEGKLDTTVETLHFIHTHKTGALLEACVVCGAI 208
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+GG +++R+ +YA+ IGL FQ++DDILD+TK+ +ELGKTAGKDL + KATYP + G+
Sbjct: 209 LGGAADEDLQRLSRYAQNIGLAFQIIDDILDITKTQEELGKTAGKDLQAQKATYPSIWGL 268
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E + + A +L+ QA ELA F +A PL LA +I +R +
Sbjct: 269 EESTRQAQELIEQAKAELASFG-NKAIPLLTLADFITNRSN 308
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD + + +P KI+EAMRYSLLAGGKR+RP+LC+A+C++ GG +AMP ACALEM
Sbjct: 29 VEAALDRAISVVYPEKIYEAMRYSLLAGGKRLRPILCLATCQMAGGTLETAMPTACALEM 88
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE VA + + +
Sbjct: 89 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFVATNTFNVPAE 148
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V++ IA+LG AVG+ GLV G+++D++SEGK DVSL L IH HKTA LLEA+VVCG I
Sbjct: 149 QVLKVIAKLGRAVGAAGLVGGQVVDLESEGKTDVSLETLNFIHNHKTAALLEASVVCGGI 208
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + +++R+ +++ IGL FQ++DD+LD+T + ++LGKTAGKDL + K TYP L GI
Sbjct: 209 LAGMSEEDLQRLSGFSQNIGLAFQIIDDVLDITSTQEQLGKTAGKDLQAQKVTYPSLWGI 268
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E + A L+A A +L F +A PL +A+YI SR H
Sbjct: 269 EESLHQARQLIAAAIAQLEPFG-DKATPLKAIAHYITSRTH 308
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 215/291 (73%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + +AL ++V +P ++HE+MRYSLLAGGKR+RP LCIA+CEL+GG AMP
Sbjct: 59 IAEKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDDFRRGKPTNHKV+GE+ AILAGDALLS AFE++ +
Sbjct: 119 TACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRE 178
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK---DVSLNELENIHLHKTAKL 176
+ + P +R +R I ++G VGSEGLV G+++DI SEG +V++ L+ IH HKT L
Sbjct: 179 TPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGAL 238
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LE +V G I+ G +VER+ KYA+ IGL FQVVDDILD T++S++LGKTAGKD
Sbjct: 239 LEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVG 298
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP L+G+E ++K A L+A A + L ++ +AAPL LA YI +RQ+
Sbjct: 299 KATYPSLVGLEESKKIADKLIADAKDLLKDYDQEKAAPLIGLADYIKNRQN 349
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/288 (54%), Positives = 212/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + +V ALD ++ L +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG AMP
Sbjct: 23 LKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTMEMAMP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+HTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE+VA +
Sbjct: 83 TACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGLLAYAFEYVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + +RV++ IA LG VG+ GLV G+++D++SEGK D+ L IH HKT LLE
Sbjct: 143 TQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYIHTHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G ++ER+ +YA+ IGL FQ++DDILD+T + +ELGKTAGKDL + KAT
Sbjct: 203 CVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELGKTAGKDLQAQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++ A +L+ +A +L F R+ PL LA +I +R +
Sbjct: 263 YPSLWGLEASKAKAQELIEEAIAQLEPFG-ERSQPLIALANFITARTY 309
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/280 (56%), Positives = 211/280 (75%), Gaps = 1/280 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +ALD+++ P ++ EAMRYSLLAGGKR+RP+LCIA+CEL GG+ + A+P A ALEM
Sbjct: 28 VEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACELAGGEPTQALPTAVALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ +FE VA +S ++P+
Sbjct: 88 IHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSKGVAPE 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R+++ + EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL A V+CG +I
Sbjct: 148 RLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTGALLSACVICGALI 207
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
GG ++ +R YAR IGL FQ++DDILDVT SS LGKTAGKDL++DK TYPKL+G+E
Sbjct: 208 GGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLLGLE 267
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+R+ A L+++A L ++ + AAPL LA YI SR
Sbjct: 268 ESRRRAELLVSEAKAALDPWQ-SSAAPLLALADYITSRDR 306
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 212/290 (73%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ S+ + V ALD+++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GGD + AMP
Sbjct: 26 LGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPALAMP 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALEMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +
Sbjct: 86 TAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSLR 145
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + +R+++ +AEL G+ GLV G+++D++ EGKDV L+ LE IHLHKT LL+A
Sbjct: 146 SPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEYIHLHKTGALLKAC 205
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V+ G +IGG + +++ +R YAR IGL FQ+VDDILDVT SS LGKTAGKDL++DK TY
Sbjct: 206 VITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTY 265
Query: 241 PKLMGIENARKFACDLLAQATEELAYFE-----VARAAPLYHLAYYIASR 285
PKL+G+E +R A L+ +A L F+ +AAPL LA Y+ R
Sbjct: 266 PKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSVQAAPLLALADYVIGR 315
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/276 (56%), Positives = 208/276 (75%), Gaps = 2/276 (0%)
Query: 11 ALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHT 70
ALD+ V +R+P I+EAMRYSL+AGGKR+RP+L IA+CE+ GG AMP ACA+EM+HT
Sbjct: 32 ALDQAVPMRYPETIYEAMRYSLMAGGKRLRPILTIATCEMTGGTIEMAMPTACAMEMVHT 91
Query: 71 MSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVV 130
MSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE++ + ++ +RV+
Sbjct: 92 MSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYIVEHTKDVPAERVL 151
Query: 131 RAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGG 189
+ I+ LG AVG+ GLV G+++D++SEGK D SL L IH HKTA LLEA VVCG I+ G
Sbjct: 152 KVISRLGRAVGAAGLVGGQVVDLESEGKTDTSLETLNFIHNHKTAALLEACVVCGGILAG 211
Query: 190 GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA 249
+ +++R+ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL S K TYP L GIE +
Sbjct: 212 VSEDDLQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLASQKVTYPSLWGIEES 271
Query: 250 RKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
R A L+A A +EL F +A PL +A+YI R
Sbjct: 272 RNKANQLVADACQELEPFG-EKAQPLMVIAHYITQR 306
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 208/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + P KI+EAMRYSLLAGGKR+RP+LCI +CEL GGDE+ A+P ACALEM
Sbjct: 40 VEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEM 99
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDDFRRGKPTNHKV+GED AILAGD LL+ AFE+V + + P
Sbjct: 100 IHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQ 159
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEG+ D++ L IH HKT LLEA+V+ G I
Sbjct: 160 ALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAI 219
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + +R+ +YA+ IGL FQVVDDILD+T + +ELGKTAGKD+ + KATYP L+G+
Sbjct: 220 LAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDVKAQKATYPSLLGL 279
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A L+ QA L F + A PL +A YI +R++
Sbjct: 280 EASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVARKY 319
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/279 (57%), Positives = 207/279 (74%), Gaps = 1/279 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV ALD ++ P + +AMRYSLLAGGKR+RP+LC+A+CELVGG AMP A ALE
Sbjct: 33 RVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSSELAMPTAVALE 92
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDA+LS AFE VA +S +
Sbjct: 93 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPA 152
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
DR++R + EL G+ GLV G+++D++SEG+ V L LE IHLHKTA LL A VV G +
Sbjct: 153 DRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGAL 212
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG N +++ +R YA IGL FQ++DDILDVT SS+ LGKTAGKDL++DK TYPKL+G+
Sbjct: 213 IGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDLLADKTTYPKLLGL 272
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+ +R+ A L+ ++ L + +AAPL LA Y+ASR
Sbjct: 273 DASREKALQLVRESKAALEPWR-DKAAPLLALADYVASR 310
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 218/286 (76%), Gaps = 3/286 (1%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+ + + ALD+++ L +P I+EAMRYSLLAGGKRVRP+LC+A+CE++GG AMP AC
Sbjct: 25 RQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIEMAMPTAC 84
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+L+F+ VA ++ +
Sbjct: 85 AMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFQLVATQTPQ 144
Query: 124 -ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAV 181
+ P+R +R IA +GSA G+ GLV G+++D+ SEG+ ++SL L IH HKTA LLEA+V
Sbjct: 145 TVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASV 204
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
VCG II G +++++ +Y++ IGL FQ++DDILD+T + ++LGKTAGKD+ S K TYP
Sbjct: 205 VCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITATKEQLGKTAGKDIESAKVTYP 264
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GIE +R A +L+ +A +L ++ +A PL +A++I +R H
Sbjct: 265 SLWGIEESRLKAQELVEEACAQLDFYG-DKAVPLQEIAHFIINRNH 309
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V++AL+ ++ + P KI+EAMRYSLLAGGKR+RP+LC+A+C+L+GG AMP ACALEM
Sbjct: 28 VDQALESSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCDLMGGTVEMAMPTACALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LLS AFE+VA ++ + P+
Sbjct: 88 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEYVATQTRNVPPE 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D++ L IH HKT LLE +VV G I
Sbjct: 148 QILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETLTFIHTHKTGALLETSVVSGAI 207
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G EVE++ +YA+ IGL FQ+VDDILD+T + +ELGK+ GKD+ + KATYP L GI
Sbjct: 208 LAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEELGKSIGKDVQAQKATYPSLWGI 267
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+ +A +LA + +A PL +A +I +R H
Sbjct: 268 EESKVQAQKLVDEAIAQLAPYS-EKAEPLRAIAQFIVTRTH 307
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 208/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + P KI+EAMRYSLLAGGKR+RP+LCI +CEL GGDE+ A+P ACALEM
Sbjct: 23 VEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEM 82
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDDFRRGKPTNHKV+GED AILAGD LL+ AFE+V + + P
Sbjct: 83 IHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQ 142
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEG+ D++ L IH HKT LLEA+V+ G I
Sbjct: 143 ALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAI 202
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + +R+ +YA+ IGL FQVVDDILD+T + +ELGKTAGKD+ + KATYP L+G+
Sbjct: 203 LAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDVKAQKATYPSLLGL 262
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A L+ QA L F + A PL +A YI +R++
Sbjct: 263 EASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVARKY 302
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPV 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLSFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 220/287 (76%), Gaps = 3/287 (1%)
Query: 2 TSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
T+KA RV KAL+ ++++++P I+E+MRYSL+A GKR+RP+LC+A+CEL GGD+S +MP
Sbjct: 29 TAKA-RVEKALEASIKVKYPETIYESMRYSLMASGKRLRPILCLATCELFGGDDSMSMPT 87
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
ACA+EM+HTMSL+HDDLP MDNDD+RRGK TNHKV+GED A+LAGDALL+ AFE +A +
Sbjct: 88 ACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAVLAGDALLAYAFEFIADNT 147
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAA 180
+ DR++R ++ LG AV +EGLV G+++D++SEGK D +L L IH HKTA LLEA+
Sbjct: 148 QNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPDTTLETLNFIHRHKTAALLEAS 207
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+ G + +++R+ YA+ IGL FQ++DDILD+T +S+ELGKTAGKD+++ K TY
Sbjct: 208 VVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDITSTSEELGKTAGKDIIAQKVTY 267
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P L+GI ++ A +L+ A ++ + + A PL +A YI +R +
Sbjct: 268 PSLLGIPESQIQAQNLIDLAKSQVQCYG-SPAIPLMRIADYIIARTY 313
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/291 (62%), Positives = 230/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ V+ AL+ +V L+ P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 67 MIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 126
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMD+ D RRGKPTNHK FGED A+LAGDALL+LAFEH+
Sbjct: 127 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFV 186
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKL 176
S ++P+R++RA+ EL A+G++GLVAG++ D+ S+G DV L LE IHLHKTA L
Sbjct: 187 SNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAAL 246
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V G I+GGG E+E++RKYARCIGLLFQVVDDILDVT+S+KELGKTAGKD+++
Sbjct: 247 LEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAG 306
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ +AAPL LA YIA R +
Sbjct: 307 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/288 (54%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K AL++ + +R+P KI+EAMRYSLLAGGKR+RP++C+A+CE+ GG+ + AMP
Sbjct: 22 LKERQKLCEVALEQAISVRYPEKIYEAMRYSLLAGGKRLRPIICLATCEMTGGNIAIAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE+VA
Sbjct: 82 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVN 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ ++ +R++R +A LG AVG+ GLV G+++D++SEGK D+ L+ IH HKT LLEA
Sbjct: 142 TEDVPAERLLRVVAHLGRAVGAAGLVGGQVLDLESEGKSDICSETLDFIHHHKTGALLEA 201
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VVCG I+ G + ++R+ YA+ IGL FQ++DDILD+T + ++LGKT GKD + K T
Sbjct: 202 SVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQEQLGKTVGKDQKAKKVT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE ++K A L+ A EL F A A PL LA++I SR H
Sbjct: 262 YPSLWGIEKSQKQAQQLIESACAELEPFGKA-AEPLVALAHFITSRSH 308
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/279 (57%), Positives = 208/279 (74%), Gaps = 1/279 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+V +ALD ++ P + EAMRYSLLAGGKR+RP+LC+ASCEL GGD S A+P A ALE
Sbjct: 21 KVEQALDSSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGDASLALPTATALE 80
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ TAILAGDALL+ AFE VA +S ++
Sbjct: 81 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPA 140
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R+++ I EL A G+ GLV G+I+D+ SEG +V L+ LE IHLHKT LL+A+V+ G +
Sbjct: 141 ERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTGALLQASVLSGAL 200
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
I G + +E +R Y+R IGL FQ++DDILDVT SS+ LGKTAGKDL +DK TYPKL+G+
Sbjct: 201 IAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGL 260
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
E ++ A L+ +A L + +A PL LA YI SR
Sbjct: 261 EESKARAESLVKEACGVLNPWS-DKAQPLLALAGYITSR 298
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 47 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 106
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 107 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL 166
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 167 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 226
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 227 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 286
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 287 EGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++S GK D+S L IH HKT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTHKTGSLLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T +++ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATNEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/279 (57%), Positives = 207/279 (74%), Gaps = 1/279 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV ALD ++ P + +AMRYSLLAGGKR+RP+LC+A+CELVGG AMP A ALE
Sbjct: 33 RVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSPELAMPTAVALE 92
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDA+LS AFE VA +S +
Sbjct: 93 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPA 152
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R++R + EL G+ GLV G+++D++SEG+ V L LE IHLHKTA LL A VV G +
Sbjct: 153 ERLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGAL 212
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG + +++ +R YA IGL FQ++DDILDVT SS+ LGKTAGKDL++DK TYPKL+G+
Sbjct: 213 IGGASDQQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDLLADKTTYPKLLGL 272
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
E +R+ A L+ ++ L + +AAPL LA Y+ASR
Sbjct: 273 EASREKALQLVRESKAALDPWR-DKAAPLLALADYVASR 310
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 208/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ ALD ++ + P KI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 IEAALDRSLSISKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTSVIALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LL+ AFE+VA ++ + P+
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAFEYVATQTQGVPPE 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
R+++ I L AVG+EGLV G+++D++SEGK D+S L IH HKT LLEA V+ G
Sbjct: 150 RLIKVIIHLSHAVGAEGLVGGQVLDLESEGKTDISAETLTFIHTHKTGALLEACVLSGAD 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G N ++ER+ KYA+ IGL FQ++DDILD+T + +ELGKTAGKDL + K TYP L GI
Sbjct: 210 LAGANREDLERLSKYAQNIGLAFQIIDDILDITATVEELGKTAGKDLKAQKVTYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+ A +L + +A PL +A YI +R+H
Sbjct: 270 EASQTQAQQLVEGAIAQLTVYG-EKADPLRAIASYIVTRKH 309
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/289 (55%), Positives = 213/289 (73%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K ALDE + + +P KI+E+MRYSLLAGGKR+RP+LC+A+ E++GG AMP
Sbjct: 22 LKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRG TNHKV+G+D AILAGD LL+ AFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAFEFVAIR 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ E P DRV++ +A LG A+G+ GLV G+++D+DSEGK D+SL L IH HKTA LLE
Sbjct: 142 TPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG I+ G + +V+R+ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL++ K
Sbjct: 202 ACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLLAKKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+ A EL F A PL +A++I SR H
Sbjct: 262 TYPSLWGIEQSRVKAQQLIEAACAELEPFG-EDAQPLKAIAHFITSRNH 309
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/301 (57%), Positives = 223/301 (74%), Gaps = 14/301 (4%)
Query: 1 MTSKAKRVNKALDET-------VQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVG 52
M +KAK +NKALD++ V L P ++ EAMRY+LL+GGKRVRP+LC+ +CELVG
Sbjct: 37 MNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCLVACELVG 96
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
G ES+AMP ACA+EMIH SL+ DDLPCMD+D RRGKPTNHKVFGE TAILA +AL+SL
Sbjct: 97 GQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILAANALMSL 156
Query: 113 AFEH-VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDI-----DSEGKDVSLNELE 166
A E +A+ S ++ +RV+RA+ E+ AVG EGLVAG+ D+ E +D L LE
Sbjct: 157 AVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETEDEGLRYLE 216
Query: 167 NIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELG 226
IH+HKTA L+EAA V G I+GGG+ E+ER++ YARC+GL+FQV+DD+LD TKSS+ELG
Sbjct: 217 FIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELG 276
Query: 227 KTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KTAGKDL++ K TYPK+MG+ENAR++A L +A E L F+ + PL LA YI RQ
Sbjct: 277 KTAGKDLITGKLTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQ 336
Query: 287 H 287
+
Sbjct: 337 N 337
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 232/291 (79%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V LR P + EA+RYSLLAGGKRVRP+LCIA CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKL 176
S+ ++P+R++RA+ EL A+G+ GLVAG+++D+ SE + V L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V GVI+GGG E+E++RKYARCIGLLFQVVDDI DVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +++ A +L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSKEVAEELRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 204/282 (72%), Gaps = 1/282 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+V ALD ++ P + E+MRYSLLAGGKR+RP+LC+A+CEL GGD + AMP A ALE
Sbjct: 29 KVEAALDGSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELAGGDSAQAMPTAVALE 88
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG PTNHKV+GE AILAGDALL+ AFE VA +S +
Sbjct: 89 MIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAFEMVALRSPGVPA 148
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++++ + EL A G+ GLV G+++D++ EGK+V L LE IHLHKT LL A V+ G +
Sbjct: 149 EQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLEYIHLHKTGALLRACVLTGAL 208
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
I G +E +R YAR IGL FQ++DDILDVT SS+ LGKTAGKDL +DK TYPKL+G+
Sbjct: 209 IAGAPDALLEALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGL 268
Query: 247 ENARKFACDLLAQATEELAYFEV-ARAAPLYHLAYYIASRQH 287
E +RK A L+A+A L + +AAPL LA YI SR
Sbjct: 269 EESRKRADALVAEAKAALEPWSAGGKAAPLLALADYITSRDR 310
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTHNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 209/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 47 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 106
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+V ++ + P
Sbjct: 107 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVVTQTRNVPPV 166
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V+ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 167 QVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 226
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 227 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 286
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 287 EGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 47 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 106
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 107 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPL 166
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 167 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 226
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 227 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 286
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 287 EGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 326
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/286 (56%), Positives = 207/286 (72%), Gaps = 1/286 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ S ++V +ALD ++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GGD + AMP
Sbjct: 25 LESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDAALAMP 84
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALEMIHTMSL+HDDLP MDNDD RRG PTNHKV+GE AILAGDALL+ AFE VA +
Sbjct: 85 TAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAFEMVALR 144
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + +++++ + EL A G+ GLV G+++D++ EGKDV L LE IHLHKT LL +
Sbjct: 145 SPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEYIHLHKTGALLRSC 204
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V+ G +I G + + + YAR IGL FQ++DDILDVT SS+ LGKTAGKDL +DK TY
Sbjct: 205 VLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTY 264
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEV-ARAAPLYHLAYYIASR 285
PKL+G+E +R+ A L+A+A + L F AAPL LA YI SR
Sbjct: 265 PKLLGLEESRQRADALVAEAKQALEPFNSNGSAAPLLALADYITSR 310
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 210/288 (72%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T++ +V ALD +V + +P ++EAMRYSLLAGGKR+RP+LC+A+CEL GG AMP
Sbjct: 29 LTARQVQVEAALDASVPMSYPETVYEAMRYSLLAGGKRLRPILCLATCELAGGTSEMAMP 88
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ +FE++A++
Sbjct: 89 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYSFEYIASQ 148
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + +RV++ + ++ AVG+ GLV G+++D++SEG+ DVS+ L IH HKTA LLEA
Sbjct: 149 TRNVPAERVLQVVTQVARAVGAAGLVGGQVVDLESEGRSDVSIETLNYIHTHKTAALLEA 208
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G ++ G + + + +YA+ IGL FQ+VDDILD+T + +ELGK+ GKDL + K T
Sbjct: 209 SVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDILDITATQEELGKSVGKDLQAQKVT 268
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE +++ A L+ A EL A PL +A YI +R H
Sbjct: 269 YPSLWGIEESQRQAAQLIESAKAELDATN-PNAQPLLAIADYIVARTH 315
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 215/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD+++ + P KI+EAMRYSLLAGGKR+RP+LC+ +CEL+GG ++P
Sbjct: 23 LKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGDALLS AFE+VA +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + ++ IA LG VG+ GLV G+++D++SEG+ DV+++ L+ IH+HKT LLE
Sbjct: 143 TCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G ++ER+ +YA+ IGL FQ++DD+LDVT SS+ELGKTAGKD + KAT
Sbjct: 203 SVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDERAQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A +L+ + A A PL +A +I +R++
Sbjct: 263 YPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQPLEAIAQFIVARKN 309
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTHNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++SEGK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 217/294 (73%), Gaps = 10/294 (3%)
Query: 3 SKAKRVNKALDETVQL--------RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD 54
S+ +V ALDE++ + +HE+MRYSL+AGGKR+RP+L +A+CE++GG
Sbjct: 11 SQLPKVEAALDESMNVLKRDWPYDSKAETVHESMRYSLMAGGKRIRPILTLAACEMMGGT 70
Query: 55 ESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF 114
E AMP A A EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFG+D A+LAGD LLS +F
Sbjct: 71 EEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGDDIAVLAGDGLLSYSF 130
Query: 115 EHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKT 173
E++A + ++P+RV+ IA G VG+ GLV G+++DI SEG KDV++ L+ IH HKT
Sbjct: 131 EYIARYTKGVAPERVLDVIARCGKCVGALGLVGGQVVDIQSEGKKDVTIETLQWIHEHKT 190
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A LLE VV G I+GG N +++R+ K+A IGL FQ++DDILDVT+ S LGKTAGKDL
Sbjct: 191 AALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDDILDVTQDSATLGKTAGKDL 250
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ DKATYPKLMG+E +++ A L+A+A ++L + +AAPL LA +I +R++
Sbjct: 251 LVDKATYPKLMGLEKSKERAEALIAEAKDQLKPWG-DKAAPLMALADFITARKN 303
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 215/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD+++ + P KI+EAMRYSLLAGGKR+RP+LC+ +CEL+GG ++P
Sbjct: 21 LKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLP 80
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGDALLS AFE+VA +
Sbjct: 81 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQ 140
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + ++ IA LG VG+ GLV G+++D++SEG+ DV+++ L+ IH+HKT LLE
Sbjct: 141 TCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKTGALLET 200
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G ++ER+ +YA+ IGL FQ++DD+LDVT SS+ELGKTAGKD + KAT
Sbjct: 201 SVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDERAQKAT 260
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A +L+ + A A PL +A +I +R++
Sbjct: 261 YPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQPLEAIAQFIVARKN 307
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/288 (53%), Positives = 214/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD+++ + P KI+EAMRYSLLAGGKR+RP+LC+ +CEL+GG ++P
Sbjct: 23 LKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTREMSLP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGDALLS AFE+VA +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + ++ IA LG VG+ GLV G+++D++SEG+ DV+++ L+ IH+HKT LLE
Sbjct: 143 TRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTLKFIHIHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G ++ER+ +YA+ IGL FQ++DDILDVT S++ELGKTAGKD KAT
Sbjct: 203 SVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQRDQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A +L+ + + A PL +A +I +R++
Sbjct: 263 YPSLWGLEESQKQAQALIDDAIAQLSPYGQS-AQPLTAIAQFIVARKN 309
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/277 (56%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
Query: 12 LDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTM 71
LD V + +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG AMP ACA EM HTM
Sbjct: 33 LDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTM 92
Query: 72 SLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVR 131
SL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE +AA++ + P +V++
Sbjct: 93 SLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQ 152
Query: 132 AIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG 190
+A LG AVG+ LV G+++D++SEG DVS L IH HKT LLEA VVCG I+ G
Sbjct: 153 VVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGA 212
Query: 191 NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
+++R+ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKD+ + K TYP L GIE ++
Sbjct: 213 EPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGKTAGKDVQAGKVTYPSLWGIEESK 272
Query: 251 KFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ A L+ A EL F +A PL +A +I +R H
Sbjct: 273 RRAKQLVEAAKAELTIFG-EKAEPLLAIADFITNRTH 308
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 209/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 47 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 106
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 107 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL 166
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++S GK D+S L IH KT LLE +VV G +
Sbjct: 167 QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQKTGALLETSVVSGAV 226
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 227 LAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 286
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 287 EESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 208/281 (74%), Gaps = 1/281 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV ALD ++ P ++ EAMRYSLLAGGKR+RP+LC+A+CEL+ G+ +A+P A A+E
Sbjct: 21 RVEAALDASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAGESETALPTAVAIE 80
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +S IS
Sbjct: 81 MIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRAFEMVSLRSPGISA 140
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R+++ + EL G+ GLV G++ D++ EGKDV ++ LE IH+HKT LL+A+VVCG +
Sbjct: 141 ERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIHIHKTGALLKASVVCGAL 200
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG ++ +R YA IGL FQ++DDILDVT SS+ LGKTAGKDL++DK TYPKL+G+
Sbjct: 201 IGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGKDLIADKTTYPKLLGV 260
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +R+ A L+ +A L +E A PL LA YI SR
Sbjct: 261 DESRQRAKVLIEKAKSVLEPWE-DDATPLLALADYIISRDR 300
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/296 (63%), Positives = 226/296 (76%), Gaps = 10/296 (3%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN+ALD + PA +H+AMRY+LLAGGKRVRP LC+A+C +VGG E+ AM
Sbjct: 75 MGERAVAVNRALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEAWAM 134
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+LAGDALLSL+F H+A+
Sbjct: 135 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMAS 194
Query: 120 KST-------EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
+ E P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 195 VGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPLERLEYIHL 254
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G IIGGG ++ER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 255 HKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 314
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KDL SDK TYPKL+G+E +R+FA LL+ A E+L F+ +AAPL HLA YIA RQ
Sbjct: 315 KDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDKEKAAPLLHLANYIAHRQ 370
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 209/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD ++ + +PAKI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG A+P ACALEM
Sbjct: 30 VESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+VA ++ + P
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ IA LG VG+ GLV G+++D++S GK D+S L IH KT LLE +VV G +
Sbjct: 150 QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQKTGALLETSVVSGAV 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ ++ +YA+ IGL FQ++DD+LD+T + +ELGKTAGKDL + KATYP L GI
Sbjct: 210 LAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGI 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+ A EL+ ++ A A PL +A YI +R++
Sbjct: 270 EESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/289 (55%), Positives = 210/289 (72%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K ALD + + +P KI+E+MRYSLLAGGKR+RP+LC+A+ E++GG AMP
Sbjct: 22 LKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRG TNHKV+GED AILAGD LL+ AFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEFVAIR 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ E P DRV++ +A LG A+G+ GLV G+++D+DSEGK D SL L IH HKTA LLE
Sbjct: 142 TPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG I+ G + V+R+ +Y++ IGL FQ++DDILD+T + ++LGKTAGKDL++ K
Sbjct: 202 ACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLLAKKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+ A EL F A PL +A++I SR H
Sbjct: 262 TYPSLWGIEQSRVKAQQLIEAACTELEPFG-EDAQPLKAIAHFITSRNH 309
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/282 (53%), Positives = 211/282 (74%), Gaps = 2/282 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+V ALD ++ + +P KI+EAMRYSLLAGGKR+RP+LC+A+CE++GG + AMP ACALE
Sbjct: 32 QVEAALDNSLPVVYPEKIYEAMRYSLLAGGKRLRPILCLATCEMLGGTTAMAMPTACALE 91
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
M+HTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ +FE++A + +
Sbjct: 92 MVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYSFEYIAKATQGVPA 151
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGV 185
++V++ IA+L AVG+ GLV G+++D++ EGK D S+ L IH HKT LLE+ VVCG
Sbjct: 152 EQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSDTSVETLTYIHTHKTGALLESCVVCGA 211
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I+ + ++++ +YA+ IGL FQ+VDDILD+T + +ELGKTAGKDL + KATYP + G
Sbjct: 212 ILASASAEVLQKLSRYAQNIGLAFQIVDDILDITATQEELGKTAGKDLQAQKATYPSIWG 271
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
++ +R+ A L+ +A ELA F + PL +A +I SR H
Sbjct: 272 LDQSRRQAQKLVDEAKAELASFG-EKGRPLMAIADFITSRTH 312
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 206/281 (73%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ ALD+ + P KI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG AMP +CALEM
Sbjct: 30 IESALDQALPRMEPDKIYEAMRYSLLAGGKRLRPILCLATCELMGGTVEMAMPTSCALEM 89
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGD LL+ AFE+ AA++ +
Sbjct: 90 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYAAAQTKNVPAP 149
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V++ +A L AVG+ GLV G+++D++SEGK D+ L IH HKT LLEA VVCG I
Sbjct: 150 QVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTHKTGALLEACVVCGGI 209
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++R+ KYA+ IGL FQ+VDDILD+T + +ELGKTAGKD+ + KATYP L G+
Sbjct: 210 LAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGKTAGKDIKAQKATYPSLWGL 269
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A +L+ +A ++ F +A PL +A +I +R H
Sbjct: 270 EASKAKAQELVNEAKAQIESFG-EKAQPLIAIADFIVNRTH 309
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 211/282 (74%), Gaps = 5/282 (1%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD+++ + P I+EAMRYSLLAGGKR+RP+LC+A+CE++GG + AM ACALEM
Sbjct: 24 VETALDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEM 83
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRGKPTNHKV+GED AILAGDALLS AFE+V A++ ++ +
Sbjct: 84 IHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYV-ARTPDVPAE 142
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
R+++ I LG AVG+EGLV G+++D++SEGK DV++ L IH HKT LLE V G I
Sbjct: 143 RLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFIHTHKTGALLEVCVTAGAI 202
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G EV+ + +YA+ IGL FQ+VDDILD+T +++ELGKTAGKDL + K TYP L GI
Sbjct: 203 LAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDLEAQKVTYPSLWGI 262
Query: 247 ENARKFACDLLAQATEEL-AYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+A+A L Y E +A PL LA YI +R++
Sbjct: 263 EKSQAEAQKLVAEAIASLEPYGE--KANPLKALAEYIVNRKN 302
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/288 (54%), Positives = 212/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD ++ + P KI+EAMRYSLLAGGKR+RP+LC+ +CEL+GG A+P
Sbjct: 23 LKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMALP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRG+ TNHKV+GED AILAGDALLS AFEHVA +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDALLSYAFEHVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ +S +V IA LG VG+ GLV G+++D++SEGK +++ + L+ IH+HKT LLE
Sbjct: 143 THNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFIHVHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G N+ ++ER+ YA+ IGL FQ++DDILD+T + ELGKTAGKD + KAT
Sbjct: 203 SVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELGKTAGKDKQAQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A +LA + A PL +A +I SR++
Sbjct: 263 YPSLWGLEESQKQAQILIEDAIAQLAPYG-REAYPLEAIARFIVSRKN 309
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/297 (62%), Positives = 227/297 (76%), Gaps = 10/297 (3%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN+ALD + PA +H+AMRY+LLAGGKRVRP LC+ASC +VGG E+ AM
Sbjct: 60 MGERAVAVNQALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLASCVVVGGREAWAM 119
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+LAGDALLSL+F H+A+
Sbjct: 120 APAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFGHMAS 179
Query: 120 KST-------EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
+ E P RVVR I EL +GSEGLVAG+++D++ G + V L+ LE IHL
Sbjct: 180 MDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTETVPLDRLEYIHL 239
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G IIGGG+ ++ER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 240 HKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 299
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KDL SDK TYPKL+G+E +R+FA LL A E+LA F+ +AAPL +LA YIA RQ+
Sbjct: 300 KDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDKEKAAPLLYLANYIAYRQN 356
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + + V+ AL++++ + +P KI++AMRYSL+AGGKR+RP+LC+A+CE+ GG AMP
Sbjct: 34 LKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCEMTGGTVEMAMP 93
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE+VA K
Sbjct: 94 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVK 153
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEA 179
+ + + +++ +A LG AV + GLV G+++D++ EG KDVS+ L IH HKT LLEA
Sbjct: 154 TQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFIHAHKTGALLEA 213
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+V+CG + G + ++++ +YAR +GL FQ++DD+LD+T + +ELGKTAGKDL + K T
Sbjct: 214 SVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELGKTAGKDLRAQKVT 273
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L GIE +R A L+ +A ELA F RA PL +A ++ +R H
Sbjct: 274 YPSLWGIEASRCQAKQLVDEAKAELATFG-ERAIPLMAIADFVTARTH 320
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 207/281 (73%), Gaps = 1/281 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV ALD ++ P K+ E+MRYSLLAGGKR+RP+LC+A+CEL GG+ A+P A ALE
Sbjct: 20 RVEDALDASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALE 79
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ ++ I
Sbjct: 80 MIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPS 139
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R+++ I EL A G+ GLV G+++D+D EGK+V L LE IHLHKT LL+A V CG +
Sbjct: 140 ERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGALLKACVTCGAL 199
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG + +E + YAR IGL FQ++DDILDVT SS+ LGKTAGKDL++DK TYPKL+G+
Sbjct: 200 IGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGL 259
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +R+ A L+A+A L + ++ PL LA YI SR
Sbjct: 260 DESRRRADLLVAKAKSALDPWP-EKSKPLLALADYITSRDR 299
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 211/290 (72%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ SK + AL+ +V+ R P KI E+M YSL+AGGKR+RPVLCIA+CE+ GG + A
Sbjct: 51 LASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVA 110
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP A ALEMIHTMSL+HDDLP MDNDD RRGKPTNH VFGED AILAGD+LLS +FEHVA
Sbjct: 111 MPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTSFEHVA 170
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLL 177
++ +S +++V IA LG +VG+EGL G++MD++ E K +L++L+ IH+HKTA LL
Sbjct: 171 RETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHKTATLL 230
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ AV G ++GG EV +A IGL FQV DDILDVT SS++LGKTAGKD +DK
Sbjct: 231 QVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGKDEATDK 290
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKL+G+E ++ +A L+ +A E LA F RAAPL +A +I R++
Sbjct: 291 TTYPKLLGLEESKAYARQLIDEAKESLAPFG-DRAAPLLAIADFIIDRKN 339
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/289 (54%), Positives = 215/289 (74%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K + ALD + + +P I+E+MRYSLLAGGKRVRP+LC+A+CE++GG AMP
Sbjct: 22 LKERQKLCDTALDTCMPVIYPETIYESMRYSLLAGGKRVRPILCLATCEMMGGTIEMAMP 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRG+ TNHKV+G+D AILAGD LL+ AFE VA +
Sbjct: 82 TACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAFAFELVATQ 141
Query: 121 STEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ E P D+V++ IA LG A+G+ GLV G+++D++SEGK D+SL L IH HKTA LLE
Sbjct: 142 TPENVPRDKVLQVIARLGRALGAAGLVGGQVVDLESEGKSDISLETLNFIHNHKTAALLE 201
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VVCG I+ G + +V+R+ +Y++ IGL FQ++DDILDVT + ++LGKTAGKDL++ K
Sbjct: 202 ACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIIDDILDVTATQEQLGKTAGKDLLAKKV 261
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L GIE +R A L+ A EL + + A PL +A++I +R +
Sbjct: 262 TYPSLWGIEESRAKAQQLIESACAELEPYG-SLAQPLKAVAHFIVNRNN 309
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 149/288 (51%), Positives = 209/288 (72%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD ++ + P I+EAMRYSLLAGGKR+RP+LC+ +CEL+GG A+P
Sbjct: 23 LKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELLGGTLEMALP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHK +GED AILAGD LL+ AFE+ A +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLAYAFEYAATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + P ++ + LG VG GLV G+++D++SEGK D++++ L+ IH HKT LLE
Sbjct: 143 TRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHTHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ GG+ +++R+ +YA+ IGL FQ++DDILD+T + +ELGKTAGKDL KAT
Sbjct: 203 SVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAGKDLRDQKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A +L++ A +L + +A PL +A +I +R +
Sbjct: 263 YPSLWGLEESKKQAQNLVSGAIAQLTPYG-NKAEPLRAIANFIVTRNN 309
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/285 (55%), Positives = 208/285 (72%), Gaps = 1/285 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ S +V AL+ + P + EAMRYSLLAGGKR+RP+LC+A+CEL GG+ + A+P
Sbjct: 15 LESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEVALALP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALEMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE VA +
Sbjct: 75 TAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAFEMVALR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + +R+++ + EL A G+ GLV G+++D++SEGKDV L LE IHLHKT LL+A
Sbjct: 135 SPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTGALLQAC 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V+ G +I G ++ +R Y+R IGL FQ++DDILDVT SS+ LGKTAGKDL +DK TY
Sbjct: 195 VLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
PKL+G+E +R+ A L+A+A L ++ A A PL LA YI SR
Sbjct: 255 PKLLGLEESRQRADALVAEAKAALQPWQ-ASAQPLLALADYITSR 298
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 207/281 (73%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V++AL+ ++ + P KI+EAMRYSLLAGGKR+RP+LC+A+CEL+GG AMP ACALEM
Sbjct: 28 VDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTIEMAMPTACALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LLS AFE VA ++ + P+
Sbjct: 88 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQTRNVPPN 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V++ IA LG VG+ GLV G+++D++SEGK D++ L IH HKT LLE +V+ G I
Sbjct: 148 QVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLTFIHTHKTGALLETSVLSGAI 207
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + R+ +YA+ IGL FQ++DDILD+T + +ELGK+ GKD+ + KATYP L GI
Sbjct: 208 LAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELGKSIGKDVQAQKATYPSLWGI 267
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A L+ +A +L + +A P+ +A +I SR H
Sbjct: 268 EESKAQAQKLVDEAIAQLVLYG-EKAEPIRAIAQFIVSRTH 307
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/288 (54%), Positives = 212/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K K V K+LDE++ + P KI+E+MRYSLLAGGKR+RP+LC+A+CEL+GG + A+P
Sbjct: 8 LKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLAGGKRLRPILCLATCELMGGTDEMALP 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGD LL+ AFE+VA +
Sbjct: 68 SACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLTYAFEYVARE 127
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + + V+ I L AVG+EGLV G++MD++ EGK DV+ L IH+HKT LLEA
Sbjct: 128 TKGVPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIHIHKTGALLEA 187
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V G ++ G ++ R+ YA+ IGL FQ++DDILDVT +++ELGKTAGKDL +DKAT
Sbjct: 188 CVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATTEELGKTAGKDLSADKAT 247
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL G+E ++ A +L+ A +L + +A L LA +I SR++
Sbjct: 248 YPKLWGLEESKAKADELIESAIAQLEVYG-EKAQSLKALAEFIVSRKN 294
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V KALD+++++ P +I+EAMRYSLLAGGKR+RP+LC+A+CELVGG AMP ACALEM
Sbjct: 28 VEKALDQSLRVGEPPQIYEAMRYSLLAGGKRLRPILCLATCELVGGSIEMAMPTACALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHK FGED AILAGD LL+ AFE++A + + P
Sbjct: 88 IHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGLLAYAFEYIATYTQGVEPA 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
V++ +++LG AVG+ GLV G+++D+ SEG D++L L IH HKT LLEA VV G I
Sbjct: 148 AVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLNYIHTHKTGALLEACVVSGAI 207
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+GG ++ R+ +YA IGL FQ+VDDILD+T + +ELGKTAGKDL +DKATYP+L+G+
Sbjct: 208 LGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELGKTAGKDLEADKATYPRLLGL 267
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A +L A ELA + + A L +A IA+R++
Sbjct: 268 EASKAKADELTEAACAELASYGDS-AMALQAIAQLIANRKN 307
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 206/281 (73%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V KALD ++++ +P KI+EAMRYSLLAGGKR+RP+LC+A+CEL GG+ AMP ACALEM
Sbjct: 37 VEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPILCLATCELSGGNIEMAMPTACALEM 96
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRG+ TNHKV+GED AILAGD LLS AFE V ++ + P
Sbjct: 97 IHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVVTQTKNVLPK 156
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V++ IA LG A G+ GLV G+++D+ SEG VS L IH HKT LLEA+VVCG I
Sbjct: 157 QVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTLHFIHTHKTGALLEASVVCGAI 216
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ + + R+ +YA+ IGL FQ+VDDILD+T +++ELGKTAGKD+ + KATYP + G+
Sbjct: 217 LADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEELGKTAGKDIEAKKATYPVIWGL 276
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A L+ +A EL F + PL LA +I SR +
Sbjct: 277 EKSRFQAQKLVEKAKAELEVFG-DKVMPLIALADFIISRSN 316
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 172/285 (60%), Positives = 206/285 (72%), Gaps = 37/285 (12%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KA VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES AMP AC
Sbjct: 20 KADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAAC 79
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKST 122
A+EMIHTMSL+HDD V+GED A+LAGDALLS AFEH+A A S+
Sbjct: 80 AVEMIHTMSLIHDD------------------VYGEDVAVLAGDALLSFAFEHLASATSS 121
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
E+SP RVVRA+ EL A+G+EGLVAG+++DI +V L L+ IHLHKTA LLEA+ V
Sbjct: 122 EVSPARVVRAVGELAKAIGTEGLVAGQVVDI----SNVGLEHLKFIHLHKTAALLEASAV 177
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIGGG+ E+ER+RK+ARCIGLLFQVVDDILDVT ++DK TYPK
Sbjct: 178 LGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT--------------IADKLTYPK 223
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
LMG+E +R+FA L +A ++L F+ + APL LA YIA+RQ+
Sbjct: 224 LMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 268
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 159/288 (55%), Positives = 214/288 (74%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + ++V AL+ + + P I+E+MRYSLLA GKR+RP+LC+ASCEL GG + A+P
Sbjct: 15 LKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGTAAIALP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+HTMSL+HDDLP MDNDDFRRG+PTNHKV+GED AILAGDALL+ AFE +A
Sbjct: 75 TACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFEAIARH 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ E+ DRV++ IA L AVG+EGLV G+++D+ SEG+ DV+L L IH HKT LLE
Sbjct: 135 TPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTGALLEV 194
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G + E++R YA+ IGL FQV+DDILD+T +++ELGKTAGKDL + KAT
Sbjct: 195 SVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDLAAKKAT 254
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L+G++ +R++A L+ +A +A A A PL +A YI +R+H
Sbjct: 255 YPSLLGLDASREYADQLITEAKAAIA-AFGAEADPLRAIADYITARKH 301
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/288 (53%), Positives = 212/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ +K V ALD+++ + +P I+E+MRYS++AGGKR+RP+LC+A+CELVGG + AMP
Sbjct: 16 LATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGGKRLRPILCLATCELVGGTSAQAMP 75
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+HTMSL+HDDLP MDNDD+RRGK TNHKV+G+D AILAGDALL+ AFE +A +
Sbjct: 76 TACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDALLAYAFEFIADR 135
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ ++ V+ I LG AVG+ GLV G+I+D+ SEGK D S+ L IH+HKTA LLE
Sbjct: 136 TEDVPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLNFIHIHKTAALLEV 195
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G ++ G + +ER+ +YA+ IGL FQ+VDD+LDVT + +ELGK+ GKD+ + KAT
Sbjct: 196 SVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEELGKSIGKDIQAQKAT 255
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP + G++ +RK A +L+ A EEL F + PL +A +I +R H
Sbjct: 256 YPSIWGLDESRKKADELIQAAKEELEPFGPLK-RPLVAIADFITARTH 302
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 204/281 (72%), Gaps = 3/281 (1%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V ALD+++ P ++EAMRYSLLAGGKR+RP+LC+A+C ++GG AM ACALEM
Sbjct: 23 VETALDQSIVTAEPVTVYEAMRYSLLAGGKRLRPILCLAACNMLGGTTEMAMNTACALEM 82
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRGKPTNHKV+GED AILAGD LLS AFE+V A++ + D
Sbjct: 83 IHTMSLIHDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDGLLSYAFEYV-ARTQGVPAD 141
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
R+++ + LG AVG+EGLV G+++D+ SEGK DVS+ L IH HKT LLE V G I
Sbjct: 142 RLLQVVIRLGQAVGAEGLVGGQVVDLQSEGKTDVSIETLNFIHTHKTGALLEVCVTSGAI 201
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++++++KYA+ IGL FQ++DDILD+T + +ELGKTAGKDL + K TYP L G+
Sbjct: 202 LAGAENAKIQKLQKYAQNIGLTFQIIDDILDITATQEELGKTAGKDLDAQKVTYPSLWGL 261
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A L +A L + A AAPL LA YI +R++
Sbjct: 262 EKSRSEAQRLTDEAIASLEDYG-ASAAPLKALAEYIINRKN 301
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 222/301 (73%), Gaps = 14/301 (4%)
Query: 1 MTSKAKRVNKALDET-------VQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVG 52
M +KAK +NKALD + V L P ++H+AMRY+LL GGKRVRP+LC+ +CELVG
Sbjct: 36 MKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVG 95
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
G ES+AMP ACA+EMIH SL+ DDLPCMD+D RRGKPTNHKVFGE T+ILA +AL SL
Sbjct: 96 GQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSL 155
Query: 113 AFEH-VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE-----GKDVSLNELE 166
A + +A+ S ++ +RV+RA+ E+ AVG+EGLVAG+ D+ E +D L LE
Sbjct: 156 AVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLE 215
Query: 167 NIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELG 226
+H+HKTA L+EAA V G I+GGG+ E+ER++ YARC+GL+FQV+DD+LD TKSS+ELG
Sbjct: 216 LMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELG 275
Query: 227 KTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KTAGKDL++ K TYPK+MG++NAR++A L +A E L F+ + PL LA YI RQ
Sbjct: 276 KTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQ 335
Query: 287 H 287
+
Sbjct: 336 N 336
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 223/301 (74%), Gaps = 14/301 (4%)
Query: 1 MTSKAKRVNKALDET-------VQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVG 52
M +KAK +NKALD + V L P ++H+AMRY+LL+GGKRVRP+LC+ +CELVG
Sbjct: 43 MNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLVACELVG 102
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
G ES+AMP ACA+EMIH SL+ DDLPCMD+D RRG PTNHKVFGE T+ILA +AL+SL
Sbjct: 103 GQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILASNALMSL 162
Query: 113 AFEH-VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE-----GKDVSLNELE 166
A + +A+ S ++ +RV+RA+ E+ AVG+EGLVAG+ D+ E +D L LE
Sbjct: 163 AVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLE 222
Query: 167 NIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELG 226
+H+HKTA L+EAA V G I+GGG+ E+ER++ YARC+GL+FQV+DD+LD TKSS+ELG
Sbjct: 223 LMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELG 282
Query: 227 KTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KTAGKDL++ K TYPK+MG++NAR++A L +A E L F+ + PL LA YI RQ
Sbjct: 283 KTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQ 342
Query: 287 H 287
+
Sbjct: 343 N 343
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 210/281 (74%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ KALD+++ + P I+EAMRYSLLAGGKR+RP+LC+A+CELVGG AMP ACALEM
Sbjct: 26 IEKALDQSLPIAEPPVIYEAMRYSLLAGGKRLRPILCLATCELVGGTIEMAMPTACALEM 85
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRG+ TNHK +GED AILAGD LL+ AFE+VAA++ ++P
Sbjct: 86 IHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILAGDGLLAYAFEYVAAQTQGVNPS 145
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
V+R IA+LG VG+ GLV G+++D+ SEG D+SL L IH HKT LLEA VV G I
Sbjct: 146 SVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLETLNYIHTHKTGALLEACVVTGAI 205
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+G + + + +YA IGL FQ++DDILD+T + +ELGKTAGKD+ +DKATYP+L+G+
Sbjct: 206 LGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEELGKTAGKDVEADKATYPRLLGL 265
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E ++ A +L+ A E++ + A PL +A IA+R++
Sbjct: 266 EASKAKADELIEAACAEMSPYGDA-GVPLKAIAQLIANRKN 305
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 210/281 (74%), Gaps = 1/281 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
R+ ALD ++ P ++ EAMRYSLLAGGKR+RP+LC+A+CEL G D +A+ A A+E
Sbjct: 21 RIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGSDSENAISTAVAIE 80
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S +
Sbjct: 81 MIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRAFEMVALRSPNVPK 140
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
DR+++ + EL G+ GLV G++ D++SEGK V L+ LE IH+HKT LL+A+VVCG +
Sbjct: 141 DRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKTGALLKASVVCGAL 200
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG + + + YA+ IGL FQ+VDDILDVT SS+ LGKTAGKDL++DK+TYPKL+G+
Sbjct: 201 IGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSEVLGKTAGKDLLADKSTYPKLLGL 260
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +RK A +L+ + ++++ + +AAPL LA YI +R
Sbjct: 261 DESRKKAKELI-RKSKDVIHPWSDKAAPLLSLADYIINRDR 300
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 10/297 (3%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M KA VN+ALD ++ PA +HEAMRY+LLAGGKRVRP LC+A+C +VGG E+ AM
Sbjct: 70 MGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAM 129
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+L GDALLSL+F H+A
Sbjct: 130 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMAR 189
Query: 120 KST-------EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
+ + P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 190 FDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLERLEYIHL 249
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G I+GGG+ ++E +R YAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 250 HKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAG 309
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KDL SDK TYPKL+G+E +R+FA LL+ A E+L+ F+ AAPL HLA YIA RQ+
Sbjct: 310 KDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAYRQN 366
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 10/297 (3%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M KA VN+ALD ++ PA +HEAMRY+LLAGGKRVRP LC+A+C +VGG E+ AM
Sbjct: 70 MGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAM 129
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H V+GE A+L GDALLSL+F H+A
Sbjct: 130 PAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMAR 189
Query: 120 KST-------EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHL 170
+ + P RVVRAI EL +GSEGLVAG+++D++ G + V L LE IHL
Sbjct: 190 FDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLERLEYIHL 249
Query: 171 HKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
HKTA LLEA+VV G I+GGG+ ++E +R YAR IGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 250 HKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAG 309
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KDL SDK TYPKL+G+E +R+FA LL+ A E+L+ F+ AAPL HLA YIA RQ+
Sbjct: 310 KDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAYRQN 366
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 206/281 (73%), Gaps = 1/281 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV AL ++ P K+ E+MRYSLLAGGKR+RP+LC+A+CEL GG+ A+P A ALE
Sbjct: 20 RVEDALGASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALE 79
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ ++ I
Sbjct: 80 MIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPS 139
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R+++ I EL A G+ GLV G+++D+D EGK+V L LE IHLHKT LL+A V CG +
Sbjct: 140 ERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGALLKACVTCGAL 199
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IGG + ++ + YAR IGL FQ++DDILDVT SS+ LGKTAGKDL++DK TYPKL+G+
Sbjct: 200 IGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGL 259
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +R+ A L+A+A L + ++ PL LA YI SR
Sbjct: 260 DESRRRADLLVAKAKSALDPWP-EKSKPLLALADYITSRDR 299
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 228/291 (78%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ V+ AL+ +V + P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 70 MIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMD+ D RRGKPTNHKVFGE A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKL 176
S+ ++P+R++R++ EL A+G++GLVAG++ D+ S+G DV L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V G IIGGG E++++RKY RCIGLLFQVVDDI+DVT+S++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMAR 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ + APL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/281 (54%), Positives = 207/281 (73%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V AL+ ++ + +P KI++AMRYSL+AGGKR+RP+LC+A+CEL+GG AMP ACALEM
Sbjct: 28 VEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGKPTNHKV+GED AILAGD LL+ AFE+V ++ + +
Sbjct: 88 IHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAE 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ +A LG AV + GLV G+++D++ EG+ D+ L L IH HKT LLEA+VV G +
Sbjct: 148 YLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTGALLEASVVSGAL 207
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + +V R+ +YA IGL FQ+VDDILD+T + LGKT GKD+ + K TYP+L G+
Sbjct: 208 LTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVAAQKMTYPRLWGL 267
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+A+A ELA + A A PL +A YI SR H
Sbjct: 268 EKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITSRSH 307
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/281 (54%), Positives = 207/281 (73%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V AL+ ++ + +P KI++AMRYSL+AGGKR+RP+LC+A+CEL+GG AMP ACALEM
Sbjct: 28 VEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGKPTNHKV+GED AILAGD LL+ AFE+V ++ + +
Sbjct: 88 IHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAE 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+++ +A LG AV + GLV G+++D++ EG+ D+ L L IH HKT LLEA+VV G +
Sbjct: 148 YLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTGALLEASVVSGAL 207
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + +V R+ +YA IGL FQ+VDDILD+T + LGKT GKD+ + K TYP+L G+
Sbjct: 208 LTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVAAQKMTYPRLWGL 267
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R+ A L+A+A ELA + A A PL +A YI SR H
Sbjct: 268 EKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITSRSH 307
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 208/286 (72%), Gaps = 9/286 (3%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +ALD ++ + +P I+EAMRYSL+AGGKR+RP+L +A+CEL+GG AMP ACA+EM
Sbjct: 29 VEQALDRSIAVTYPETIYEAMRYSLMAGGKRLRPILTLAACELLGGSIEVAMPTACAMEM 88
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDDFRRGKPTNHKV+GED AILAGD LL+ AFE++A ++ SPD
Sbjct: 89 IHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGEDMAILAGDGLLAYAFEYIADRTP--SPD 146
Query: 128 -----RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAV 181
+V+R IA LG AV + GLV G+++D++ EGK D + L IH+HKTA LLEA V
Sbjct: 147 HTTAKQVLRVIAHLGHAVAATGLVGGQVVDLECEGKTDTTAETLTFIHMHKTAALLEACV 206
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
CG I+ G I+++R+ YA IGL FQ++DDILD+T ++++LGKTAGKDL + K TYP
Sbjct: 207 SCGAILAGATAIDLQRLSTYANNIGLAFQIIDDILDITATAEQLGKTAGKDLAAQKVTYP 266
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GI ++ A L+ +A +L + A A PL +A +I +R +
Sbjct: 267 SLWGIPTSQAKAQALVEEANAQLDPYGNA-AMPLKAIANFITARNN 311
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 227/291 (78%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ V+ AL+ +V + P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 70 MIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMD+ D RRGKPTNHKVFGE A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKL 176
S+ ++P+R++R++ EL A+G++GLVAG++ D+ S+G DV L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAAL 249
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA V G IIGGG E++++RKY RCIGLLFQVVDDI+DVT+S++ELGKTAGKD+ +
Sbjct: 250 LEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVKAR 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ + APL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/289 (54%), Positives = 210/289 (72%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K + ALD + + +P KI+EAMRYSLLAGGKRVRP+LC+A+CE++GG AMP
Sbjct: 23 LKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCEMMGGTIEMAMP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+LAFE VA K
Sbjct: 83 TACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALAFELVALK 142
Query: 121 S-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ ++ + ++ I LG A+G+ GLV G+++D++ EGK D+SL L IH HKT+ LLE
Sbjct: 143 TPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNFIHRHKTSALLE 202
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A VV G II G + +V+R+ +YA IGL FQ++DDILD+T + ++LGKTAGKD + K
Sbjct: 203 ACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAGKDQKAKKV 262
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L G+E +R A +L+ A EL F RA PL +A++I SR +
Sbjct: 263 TYPSLWGLEESRLKAQELVKVACAELEPFG-DRAKPLQAIAHFITSRNN 310
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V KALD+++ + P KI+EAMRYSLLAGGKR+RP+LC+A EL+G E AMP
Sbjct: 39 LQEKKEIVEKALDDSLPIEKPEKIYEAMRYSLLAGGKRLRPILCLAVAELLGQTEDVAMP 98
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MDNDD+RRG+ TNHKV+GED AILAGD LL+ AFE VA K
Sbjct: 99 TACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGEDIAILAGDGLLAYAFEFVAIK 158
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
++ I +R+V+ +A LG AVG+ GLV G+++D++ EGK DV+ + L IH KT LLEA
Sbjct: 159 TSCIPSERIVKVLAILGKAVGANGLVGGQVLDLECEGKADVTADTLSFIHRRKTGALLEA 218
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V G ++ G + ++ R+ YA+ IGL FQ+VDDILDVT +S+ELGKTAGKD+ + KAT
Sbjct: 219 CVSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDILDVTATSEELGKTAGKDISAQKAT 278
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP++ G++ +R+ A +L+ A +L + +A PL +A YI +R++
Sbjct: 279 YPRIWGLDTSRQKAEELIKNAIAQLDIYG-DKAQPLRAIAEYIINRKN 325
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/261 (56%), Positives = 199/261 (76%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +ALD+++ P ++ EAMRYSLLAGGKR+RP+LC+A+CEL GG+ + A+P A ALEM
Sbjct: 28 VEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACELAGGEPAEALPTAVALEM 87
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ +FE VA +S + P+
Sbjct: 88 IHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSPGVPPE 147
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R+++ + EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL A V+CG +I
Sbjct: 148 RLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTGALLSACVICGALI 207
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
GG ++ +R YAR IGL FQ++DDILDVT SS LGKTAGKDL++DK TYPKL+G++
Sbjct: 208 GGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLLGLD 267
Query: 248 NARKFACDLLAQATEELAYFE 268
+R+ A L+++A L ++
Sbjct: 268 ESRRRAELLVSEAKAALEPWQ 288
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/284 (57%), Positives = 213/284 (75%), Gaps = 2/284 (0%)
Query: 3 SKAK-RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
+KAK V +ALD+++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GGD + AMP
Sbjct: 25 AKAKATVEQALDQSLVPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDAAQAMPT 84
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S
Sbjct: 85 AVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRS 144
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
+ P+R+++ + EL G+ GLV G+++D++SEGK+V L LE IHLHKT LL A V
Sbjct: 145 PGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACV 204
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
+ G +IGG + + +R YAR IGL FQ++DDILD+T SS+ LGKTAGKDL++DK TYP
Sbjct: 205 ITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIADKTTYP 264
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
KL+G+E +RK A DL+ +A L + ++A PL LA YI SR
Sbjct: 265 KLLGLEESRKRAADLVQEAKGVLKPW-ASKAQPLLALADYITSR 307
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/280 (58%), Positives = 205/280 (73%), Gaps = 1/280 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV ALD + P + EAMRYSLLAGGKR+RP+LC+A+CEL GG+ AMP A ALE
Sbjct: 40 RVEAALDAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGESERAMPTAVALE 99
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S+ + P
Sbjct: 100 MIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDALLTRAFEMVALRSSGVPP 159
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R++ + EL A G+ GLV G+++D++ EGK V L+ LE IHLHKT LL A V+CG +
Sbjct: 160 ERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIHLHKTGALLRACVLCGAL 219
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
I G + +R YAR IGL FQ++DDILDVT SS+ LGKTAGKDL +DK TYPKL+G+
Sbjct: 220 IAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGL 279
Query: 247 ENARKFACDLLAQATEELAYFEV-ARAAPLYHLAYYIASR 285
E +R+ A L+ +A E LA F RAAPL LA YI SR
Sbjct: 280 EESRQRAQALVLEAKEALAPFAAGGRAAPLLALADYITSR 319
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 217/288 (75%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T + ++ ALD ++ +P I++AMRYSLLAGGKR+RP+LC+ASCEL+GG S MP
Sbjct: 19 LTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGGKRLRPMLCLASCELIGGSLDSVMP 78
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ACALEM+HTMSL+HDDLP MD+DD+RRGK TNHKV+GED AILAGD LL+ +FE++A +
Sbjct: 79 MACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDGLLAYSFEYIATQ 138
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ +S DRV++AIA L AVG+ GLV G+++D++SEGK D+S+ L IH HKT LL+A
Sbjct: 139 TQGVSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPDISVETLTYIHNHKTGALLKA 198
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VVCG I+ G ++E++ K+A IGL FQ++DDILD+T + ELGKTAGKD+ + KAT
Sbjct: 199 CVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDITATQAELGKTAGKDIQAQKAT 258
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL G+E +++ A L+A+A LA F RA PL LA YI R++
Sbjct: 259 YPKLWGLEESKRQADKLVAEAKAILAEFG-DRARPLQALADYITDRKN 305
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 209/288 (72%), Gaps = 3/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ ++ V ALD ++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GGD + AMP
Sbjct: 26 LAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPALAMP 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +
Sbjct: 86 TAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALR 145
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + +R+++ +AEL G+ GLV G+++D++SEGK V L LE IHLHKT LL A
Sbjct: 146 SPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLRAC 205
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V+ G +I G + ++ +R YAR IGL FQ+VDDILDVT SS LGKTAGKDL++DK TY
Sbjct: 206 VITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTY 265
Query: 241 PKLMGIENARKFACDLLAQATEELAYF---EVARAAPLYHLAYYIASR 285
PKL+G+E +R+ A L+ +A LA F E A+A+PL LA Y+ R
Sbjct: 266 PKLLGLEESRQRAKALVEEAKASLAAFKPTEPAKASPLLALADYVIGR 313
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/281 (52%), Positives = 204/281 (72%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +AL+ ++ + +P KI+++MRYSLLAGGKR+RP+LC+A+CEL+GG AMP ACALEM
Sbjct: 35 VEQALEASITITYPEKIYDSMRYSLLAGGKRLRPILCLATCELLGGTLEMAMPTACALEM 94
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDNDD+RRGK TNHKV+GED AILAGD LL+ AFE V + + +
Sbjct: 95 IHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFVVENTVGVKAE 154
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVI 186
++++ I+ LG AV + GLV G+++D++SEG ++++ L IH HKT LLEA+V+ G +
Sbjct: 155 KLLKVISRLGHAVAATGLVGGQVVDLESEGITEITIETLNFIHSHKTGALLEASVLSGGL 214
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G V+R+ YAR IGL FQ+VDD+LD+T + +ELGK+ GKD+ + K TYP L GI
Sbjct: 215 LAGAEGDAVQRLTNYARNIGLAFQIVDDVLDITSTQEELGKSIGKDIQAQKVTYPSLWGI 274
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A L+ A EL+ F A A PL +A +I +R H
Sbjct: 275 EASRVEAQRLVDLAKAELSPFGAA-AIPLQAIADFITARTH 314
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 206/280 (73%), Gaps = 1/280 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
K + +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P A A+
Sbjct: 19 KVIEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAI 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +S +
Sbjct: 79 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSLRSPGVD 138
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
P+R++ I EL G+ GLV G+++D++ EGK+V L+ LE IHLHKT LL+A V G
Sbjct: 139 PNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKTGALLKACVRTGA 198
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
+I G N ++ + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TYPKL+G
Sbjct: 199 MIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 258
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+E ++K A DL+ +A + + + A A L LA +I +R
Sbjct: 259 MEESKKRAFDLVEKAKKAIEPWG-ADANHLISLADFITNR 297
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/282 (53%), Positives = 203/282 (71%), Gaps = 1/282 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P A A+
Sbjct: 20 KVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAI 79
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +S +
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVD 139
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
P R++ I EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A V G
Sbjct: 140 PTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGA 199
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
+I G N ++ + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TYPKL+G
Sbjct: 200 MIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 259
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+E ++K A DL+ A + + + A A L LA +I +R
Sbjct: 260 MEESKKRAFDLVENAKKAIKPWG-ADAKYLISLADFITNRDR 300
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 206/287 (71%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P
Sbjct: 15 LTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+EMIHTMSL+HDDLP MDND FRRG+PTNHKV+G+ AILAGDALL+ AFE V+ +
Sbjct: 75 TAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + +R++ + EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A+
Sbjct: 135 SPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G +I G N + + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TY
Sbjct: 195 VRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E ++K A DL+ QA + + + + A L LA +I +R
Sbjct: 255 PKLLGMEESKKKAFDLVDQAKKAIEPWGL-NAKYLISLADFITNRDR 300
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 206/287 (71%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P
Sbjct: 15 LKNTKKVVEEALDVSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +
Sbjct: 75 TAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + P R++ I EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A
Sbjct: 135 SPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKAC 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G +I G N ++ + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TY
Sbjct: 195 VRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E ++K A DL+ +A + + + + A L LA +I +R
Sbjct: 255 PKLLGMEESKKRAFDLVEKAKKAIEPWG-SDAKYLISLADFITNRDR 300
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/298 (63%), Positives = 229/298 (76%), Gaps = 12/298 (4%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +A VN ALD V PA +HEAMRY+LLAGGKRVRP LC+A+C + GG E+ AM
Sbjct: 62 MGERAVAVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAM 121
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A A+EM+HTMSLVHDDLPCMD+DD RRGKPT H +FGE A+LAGDALL+LAF+H+A+
Sbjct: 122 APAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALAFQHMAS 181
Query: 120 KSTEISPD--------RVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIH 169
+ PD RVVRAI EL +GSEGLVAG+++D++ G + V L+ LE IH
Sbjct: 182 VDS-YPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIH 240
Query: 170 LHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 229
LHKTA LLEA+VV G IIGGG+ ++ER+RKYAR IGLLFQVVDDILDVTKSS+ELGKTA
Sbjct: 241 LHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTA 300
Query: 230 GKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
GKDL SDK TYPKL+G+E +R+FA LL+ A E+LAYFE +AAPL +LA YIA RQ+
Sbjct: 301 GKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYLANYIAYRQN 358
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 205/287 (71%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG S A+P
Sbjct: 15 LKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +
Sbjct: 75 TAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + P R++ I EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A
Sbjct: 135 SPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKAC 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G +I G N ++ + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TY
Sbjct: 195 VRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E ++K A DL+ +A + + + + A L LA +I +R
Sbjct: 255 PKLLGMEESKKRAFDLVEKAKKAIEPWG-SEAKYLISLADFITNRDR 300
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/288 (51%), Positives = 199/288 (69%), Gaps = 35/288 (12%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KAK VN+ALD + LR P +IH+AMRYSLL GGKR+ P++CI++CELVGG ES+AMP
Sbjct: 1 MLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMP 60
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
V CA+EM+H +SL+ DDLPCMDNDD RRGKP+NHK FGE
Sbjct: 61 VVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGE--------------------- 99
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+EL ++GS+GLVAG+ +D+ SEG ++ L LE+IH++K LLEA
Sbjct: 100 -------------SELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEA 146
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+ V G ++GGG+ ++E +RK+ RC+GLL+QVVDDILD+TKS++ELGKTAGKDLV+DK T
Sbjct: 147 SAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVT 206
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+GIE +R+FA L A + L+ F+ +AA L + + RQ+
Sbjct: 207 YPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQN 254
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/282 (53%), Positives = 205/282 (72%), Gaps = 1/282 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P A A+
Sbjct: 20 KIVEEALDLSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAI 79
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +S +
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVD 139
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
P+R++ I EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A V G
Sbjct: 140 PNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGA 199
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
+I G N ++ + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TYPKL+G
Sbjct: 200 MIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 259
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+E ++K A DL+ +A + + + + A L LA +I +R
Sbjct: 260 MEESKKRAFDLVDKAKKAIEPWGL-DAQYLISLADFITNRDR 300
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/284 (55%), Positives = 207/284 (72%), Gaps = 5/284 (1%)
Query: 8 VNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVG-GDESSAMPVACA 64
+ KALDE+V + KI EAM+YSL+AGGKR+RPVLC+A+CE+ GD + AMP A +
Sbjct: 55 IEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAMPAAVS 114
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHTMSL+HDDLP MDNDD RRGKPT H ++GED AILAGDALLS +F HVA ++ +
Sbjct: 115 LEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAEQTKGV 174
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVC 183
+ DRV+ + LG +VG++GL G++MD++ EGK +L +L IH HKTA LL+ AV
Sbjct: 175 AADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVAS 234
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G IIGG + EV+ ++A IGL FQV DDILDVT+S++ELGKTAGKD +DK TYPKL
Sbjct: 235 GAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKL 294
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G++ AR+ A L+A+A + L F RA L LA +I +R++
Sbjct: 295 LGLDGAREEAERLVAEAKKSLEPFG-DRATALLALADFIINRKN 337
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 204/287 (71%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ + K V +ALD ++ +P + E+MRYSLLAGGKR+RP+LC+ASC L GG+ S A+P
Sbjct: 15 LKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+EMIHTMSL+HDDLP MDNDD RRG+PTNHKV+G+ AILAGDALL+ AFE V+ +
Sbjct: 75 TAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
S + P R++ + EL G+ GLV G+++D++ EGK+V L LE IHLHKT LL+A
Sbjct: 135 SPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGALLKAC 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G +I G N + + YA IGL FQ++DDILD+T SS++LGKTAGKDL++DK TY
Sbjct: 195 VRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
PKL+G+E ++K A DL+ +A + + + A L LA +I +R
Sbjct: 255 PKLLGMEESKKRAFDLVEKAKKAIEPWG-PDAKYLISLADFITNRDR 300
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/281 (50%), Positives = 202/281 (71%), Gaps = 2/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V L++++ +P I++++RYSL AGGKR+RP+LC+ASCEL GG A+P ACALEM
Sbjct: 21 VEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEM 80
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLP MDND +RRGKPTNH ++GED AILAGDALL+ AFE +A ++ + D
Sbjct: 81 IHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPAD 140
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVI 186
+V+ IA++ +V + GLV G+I+D+ SEGK D +L L IH+HKT LLEAAV+ G +
Sbjct: 141 LIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGAL 200
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G ++ R +YA+ IGL FQ++DD+LD+ + ++LGK+ GKDL + KATYP G+
Sbjct: 201 LAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGV 260
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E + K A L+ +A EE+ YF+ +A PL +A +I +R +
Sbjct: 261 EESIKQAELLVEEAKEEILYFD-NKAIPLIAIADFIVNRNN 300
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 186/254 (73%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV AL+ + P + EAMRYSLLAGGKR+RP+L +A+CEL GGD AMP A A+E
Sbjct: 21 RVEAALESALGPERPESLREAMRYSLLAGGKRLRPILTLAACELAGGDADLAMPTAVAME 80
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLP MDNDD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S +
Sbjct: 81 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEAKAILAGDALLTRAFEMVALRSPGVPA 140
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+R+++ + EL A G+ GLV G+++D++ E + V L+ LE IHLHKT LL A V+ G +
Sbjct: 141 ERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLDTLEYIHLHKTGALLRACVISGAL 200
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
I G + + +R YAR IGL FQ++DDILDVT SS LGKTAGKDL +DK TYPKL+G+
Sbjct: 201 IAGASEELLTALRTYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLAADKTTYPKLLGL 260
Query: 247 ENARKFACDLLAQA 260
E +R+ A L+ +A
Sbjct: 261 EESRRRADALVGEA 274
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 208/283 (73%), Gaps = 2/283 (0%)
Query: 4 KAK-RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KAK RV ALD ++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GG+ + A+P A
Sbjct: 13 KAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTA 72
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S
Sbjct: 73 VALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSP 132
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
++ +R+++ + EL G+ GLV G+++D++SEGK+V L LE IHLHKT LL A V+
Sbjct: 133 DVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVI 192
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIGG + ++ +R YAR IGL FQ++DDILD+T SS LGKTAGKDL++DK TYPK
Sbjct: 193 TGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAGKDLIADKTTYPK 252
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
L+G++ +R+ A D L A +E +A PL LA +I SR
Sbjct: 253 LLGLDESRRRA-DALVNAAKEALQPWAEKAIPLLALADFITSR 294
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 201/281 (71%), Gaps = 1/281 (0%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+V ALD + ++P K++EAMRYSLLAGGKR+RP+LC+ SC + GG AMP ACALE
Sbjct: 16 QVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMSGGSADLAMPTACALE 75
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
M+HTMSL+HDDLP MD+DD+RRGK TNHKV+GED AILAGDALL+ AF+ +A K+ P
Sbjct: 76 MVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLAYAFQLIAEKTVGAQP 135
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
+RVV + LG A GLV G+++D++SEG+ ++L LE IH HKT LLE +V+ G I
Sbjct: 136 ERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIHTHKTGALLEVSVISGAI 195
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G + VER+ +Y+RCIGL FQ+ DD+LD+T + ELGKTAGKDL KATYP L+G
Sbjct: 196 LAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGKTAGKDLRDRKATYPSLLGY 255
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ AR A L QA ELA F A A PL LA +I R+H
Sbjct: 256 DGARDRAEQLREQAVAELADFG-ASARPLTALAEFIVQRRH 295
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/283 (55%), Positives = 210/283 (74%), Gaps = 2/283 (0%)
Query: 4 KAK-RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KAK +V ALD ++ P + EAMRYSLLAGGKR+RP+LC+A+CEL GG+ + A+P A
Sbjct: 13 KAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTA 72
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S
Sbjct: 73 VALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSP 132
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ +R+++ + EL G+ GLV G+++D++SEGK+V L LE IHLHKT LL A V+
Sbjct: 133 GVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVI 192
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G +IGG + ++ +R YAR IGL FQ++DDILD+T SS+ LGKTAGKDL++DK TYPK
Sbjct: 193 TGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIADKTTYPK 252
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
L+G++ +R+ A L+ +A E L + +A PL LA +I SR
Sbjct: 253 LLGLDESRRRADALVNEAKESLQPW-AEKAVPLLALADFITSR 294
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 208/290 (71%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M K + + L+ ++ L P I+E+MRYSLLAGGKR+RP+LCIA+CEL GG +A
Sbjct: 82 MKRKKDYIEEQLNRSIPLLDPRLGLIYESMRYSLLAGGKRIRPMLCIATCELFGGSTLTA 141
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
P A ALEMIHTMSL+HDDLP MDNDD+RRGK TNHKVFGED AILAGDALL+ AFE++A
Sbjct: 142 TPTAVALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDALLARAFEYIA 201
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLL 177
++ + + V++ I+ LG++VG G+V G+++DI SEG K+VS+++L IH HKT LL
Sbjct: 202 NETQGVPAEVVLKVISFLGASVGYSGIVGGQVVDILSEGKKEVSIDDLIWIHKHKTGALL 261
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ VV G ++GG +V RV ++A IGL FQV DDILDVT S +ELGK+ GKD SDK
Sbjct: 262 KCCVVTGALLGGAKEEDVIRVGEFAERIGLAFQVADDILDVTASFEELGKSIGKDERSDK 321
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
AT+P+LMG+E +++FA + L Q ++ L RA L LA YI SR +
Sbjct: 322 ATFPRLMGLEESKRFA-EKLVQESKYLIEPYGKRAYYLEALADYIVSRSY 370
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 207/283 (73%), Gaps = 2/283 (0%)
Query: 4 KAKR-VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KAK V ALD+++ P + +AMRYSLLAGGKR+RP+LC+A+CEL GGD A+P A
Sbjct: 13 KAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGDAKHAVPTA 72
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S
Sbjct: 73 VALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSP 132
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ D++++ + EL G+ GLV G+++D++SEGK V L LE IHLHKT LL A V+
Sbjct: 133 GVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLSACVI 192
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G +IG + + +R YAR IGL FQ++DDILD+T SS+ LGKTAGKDL++DK TYPK
Sbjct: 193 TGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLADKTTYPK 252
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
L+G+E +RK A DL+ +A E L + +A PL LA +I SR
Sbjct: 253 LLGLEESRKRADDLVREAKEALQPWS-DQAMPLLALADFITSR 294
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/289 (56%), Positives = 201/289 (69%), Gaps = 6/289 (2%)
Query: 4 KAKRVNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
K V KALDE++ P I E+MRYSLLAGGKRVRPV+CIA+CE+ GG E+ AMP
Sbjct: 65 KVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPT 124
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A A+EMIHTMSL+HDDLP MDNDD RRG PTNH ++G+D AILAGDALLS +FEH A S
Sbjct: 125 AVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGS 184
Query: 122 TE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLE 178
T I +R+V I LG AVG+ GL G++MD++ E K VSL EL IH HKTAKLLE
Sbjct: 185 TAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLE 244
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G ++ G +V + YA IG+ FQV DDILDVT +S+ LGKTAGKD +DK
Sbjct: 245 VSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKT 304
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG++ AR A L ++A + LA + +A PL +A YI RQ+
Sbjct: 305 TYPKLMGLDGARAEADRLYSEAIDSLAPYG-EKAVPLIAIAKYIVERQN 352
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 174/215 (80%), Gaps = 1/215 (0%)
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A + +
Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVI 186
++VRAI EL ++GSEGLVAG+++DIDSEG +V L +LE IHLHKT LLEA+VV G I
Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+GGG EVE++R +ARCIGLLFQVV DILDVTKSS+ELGKTAGKDLV+DK TYP+LMGI
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGKDLVADKVTYPRLMGI 180
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYY 281
+ +R+FA L +A + L+ F+ +AAPL LA Y
Sbjct: 181 DKSREFAEQLNTEAKQHLSGFDPIKAAPLIALANY 215
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/283 (56%), Positives = 207/283 (73%), Gaps = 2/283 (0%)
Query: 4 KAK-RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KAK V ALD+++ P + +AMRYSLLAGGKR+RP+LC+A+CEL GG+ A+P A
Sbjct: 13 KAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGEAKHAVPTA 72
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALEMIHTMSL+HDDLP MD+DD RRG+PTNHKV+GE AILAGDALL+ AFE VA +S
Sbjct: 73 VALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSP 132
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ +R+++ + EL G+ GLV G+++D++SEGK V L LE IHLHKT LL A V+
Sbjct: 133 GVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLSACVI 192
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G +IG + + +R YAR IGL FQ++DDILD+T SS+ LGKTAGKDL++DK TYPK
Sbjct: 193 TGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLADKTTYPK 252
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
L+G+E +RK A DL+ +A E L + +A PL LA +I SR
Sbjct: 253 LLGLEESRKRADDLVREAKEALQPWS-EQAMPLLALADFITSR 294
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 173/214 (80%), Gaps = 1/214 (0%)
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EM+HTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS +FEH+A + +
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCG 184
P R+VRAI EL ++G+EGLVAG+++DI SEG DV L LE IH+HKTA LLEAAVV G
Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+GGG E+E++RK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV++K TYPKLM
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVAEKVTYPKLM 180
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHL 278
GIE +R+ A L A E+L F+ +AAPL L
Sbjct: 181 GIEKSRELAEKLNKDAQEQLRDFDEEKAAPLMAL 214
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 172/207 (83%), Gaps = 2/207 (0%)
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CA+EMIHTMSL+HDDLP MDNDDFRRGKPTNHKVFGEDTA+LAGDALLS AFEH+A ++
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 123 EISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAA 180
+ P DR +R I+ELG +GS+GLV G+++DI SEG +V L LE IH+HKTA LLE +
Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G I+GG E+ R+R+YARC+GLLFQV+DDILDVTKSS+ELGKTAGKDL++DKATY
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGKDLLTDKATY 180
Query: 241 PKLMGIENARKFACDLLAQATEELAYF 267
PKLMG+E A++FA +L +A E L+ F
Sbjct: 181 PKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/288 (53%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K + V ALD+++ + P KI+EAMRYSLLAGGKR+RP+LC+ +CEL+GG ++P
Sbjct: 23 LKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLP 82
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEMIHTMSL+HDDLP MD+DD+RRGK TNHKV+GED AILAGDALLS AFE+VA +
Sbjct: 83 TACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQ 142
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ + ++ IA LG VG+ GLV G+++D++SEGK DV+++ L+ IH+HKT LLE
Sbjct: 143 TRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIHKTGALLET 202
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+VV G I+ G +VER+ +YA+ IGL FQ++DDILDVT S++ELGKTAGKD KAT
Sbjct: 203 SVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQRDKKAT 262
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L G+E ++K A L+ A ++ + + A PL +A +I +R++
Sbjct: 263 YPSLWGLEESQKQAQALIDDAIAQVDPYGQS-AQPLKAIAQFIVARKN 309
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A + + P
Sbjct: 1 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVGVPP 60
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGV 185
RV+ A+ EL ++G+EGLVAG+++DI SEG DV L LE IHLHKTA LLEAAVV G
Sbjct: 61 ARVIGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEAAVVLGA 120
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I+GGG+ EVE++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+DK TYPKLMG
Sbjct: 121 ILGGGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLMG 180
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPL 275
IE +++FA L A ++L+ F+ +AAPL
Sbjct: 181 IEKSKEFADKLNKDAQDQLSGFDPEKAAPL 210
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/292 (50%), Positives = 208/292 (71%), Gaps = 8/292 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ +K ++ AL++ VQ A++ EAMRYSLLAGGKRVRP L +A+C + GG + A
Sbjct: 96 LLAKRASIDAALNDAVQATSVMNARLAEAMRYSLLAGGKRVRPALVLAACRMFGGVDEQA 155
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP A A+EM+HTMSL+HDDLP MDNDDFRRG+PTNHKV+GE+ AILAGDALLS AF +A
Sbjct: 156 MPTAVAVEMVHTMSLIHDDLPAMDNDDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQIA 215
Query: 119 AKS--TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK---DVSLNELENIHLHKT 173
K+ T + P R + I LG+ VG GL AG+ +D+++EGK ++SL LE IHL+KT
Sbjct: 216 EKTPATLVPPSRTLEVIRRLGNCVGLHGLAAGQALDLEAEGKPADEISLRMLETIHLYKT 275
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A LL ++ G I+ G ++ +++ + +A IGL FQV DD+LDVT +++ LGKTAGKD+
Sbjct: 276 AALLRFSITAGAILAGASVDDIDCMESFANKIGLAFQVADDVLDVTATTETLGKTAGKDV 335
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
++KAT+P+++G+E +RK+A DL+ +A ELA + RA+ L A +I R
Sbjct: 336 AAEKATFPRILGLEESRKYAEDLVKEAKGELAKYG-DRASLLLGFADFIIQR 386
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/291 (50%), Positives = 213/291 (73%), Gaps = 5/291 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ ++ +V A+D + + +P +I+EAMRYSLLAGGKR+RP+LC+A+CE++G + AMP
Sbjct: 18 LSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCEMLGASANIAMP 77
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+HTMSL+HDDLP MD+DD+RRGK TNHKV+GE A+LAGDALL+ AFEH+A +
Sbjct: 78 TACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDALLTYAFEHIATQ 137
Query: 121 STEIS----PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ + S P +++ +A+LG AVG+EGLV G+++D+ SEG V L IH+HKTA L
Sbjct: 138 TPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETLTFIHMHKTAAL 197
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LE +V G ++ G + V+R+R+YA+ IGL FQ+VDD+LD+T + + LGK+ GKD+ +
Sbjct: 198 LEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITSTPETLGKSIGKDIAAQ 257
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP L G+E +++ A L+A A EL+ F A PL +A +I +R H
Sbjct: 258 KATYPSLWGLEESQRKAEQLVADAISELSEFGEG-AQPLVAIAQFITARTH 307
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 174/219 (79%), Gaps = 2/219 (0%)
Query: 71 MSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDR 128
MSL+HDD+PCMD+D RRG+P+NH FGE TA+LAGDAL +LAFEHVA + + DR
Sbjct: 1 MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 129 VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIG 188
+RA+AELGSA G+ G+ AG++ D +SEG VSL LE IH+HKTA+LLEAA V G I+G
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120
Query: 189 GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIEN 248
GG EVERVR+YARC+GLLFQVVDD+LD+T +S++LGKTAGKD+ +DKATYPKL+G++
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 180
Query: 249 ARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
AR++A DLLA A EL F+ RAAPL HLA +IA RQH
Sbjct: 181 AREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 219
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/272 (58%), Positives = 211/272 (77%), Gaps = 2/272 (0%)
Query: 16 VQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVH 75
+ LRHPAK+HEAMRYSLL+GGKRV P++C+A+C LVGG++++AMP ACALEMIH MSL+H
Sbjct: 106 LPLRHPAKLHEAMRYSLLSGGKRVCPIVCLAACRLVGGEDAAAMPSACALEMIHAMSLIH 165
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DDLPCMD+DD RRG+P+NHKVFGE A+LAG AL++ AFEH+A + + +R +R I E
Sbjct: 166 DDLPCMDDDDLRRGRPSNHKVFGEPAAVLAGYALIASAFEHIATATEGVPAERTLRVIGE 225
Query: 136 LGSAVGSEGLVAGEIMDIDS--EGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
+ +G+EG+VAG+++D+ S G DV L +LE IH+HKTA +EAA V G ++GG
Sbjct: 226 VARLIGAEGVVAGQVVDLRSGGGGDDVGLEKLEYIHVHKTAAAVEAAAVAGAVLGGACEE 285
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
E+ VR YAR GL+FQVVDD+LDVTKS++ELGKTAGKD+ + KATYPKL+G+E +R+ A
Sbjct: 286 EIGNVRIYARRAGLMFQVVDDVLDVTKSTEELGKTAGKDVATGKATYPKLIGVEKSREVA 345
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L +A E+L FE RAAPL L +IA R
Sbjct: 346 ENLKREAQEQLLGFERGRAAPLMALLDFIAYR 377
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/267 (53%), Positives = 185/267 (69%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA +H AMRYS+ AGGKRVRPVL +A+CE VGG + MP ACA+EMIHT SL+HDDLP
Sbjct: 29 PASLHGAMRYSVFAGGKRVRPVLMLAACEAVGGSPQAVMPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRG PTNHKV+GE TAILAGDALL+ AF ++A P +R I E+ A
Sbjct: 89 MDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSANGEGGDPAARLRVIQEIAVAS 148
Query: 141 GSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+V G+++D++SEG+ DV L L IH HKT L+ A+V G I+GG + + + +
Sbjct: 149 GSRGMVGGQVVDMESEGRHDVDLATLSYIHTHKTGALIRASVRSGAIMGGASEEQFKALT 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+YA IGL FQ+ DDILDV +++ELGK AG D KATYP LMG+E ++ A +L+
Sbjct: 209 RYADAIGLAFQIADDILDVEGTTEELGKDAGSDQARGKATYPALMGLEASKARARELVQI 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F++ RA PL +A YI R+
Sbjct: 269 ALDALEPFDL-RAEPLRAIASYIVKRK 294
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
V+KAL E + K+ E+M YSLLAGGKRVRP+LCIAS E+ GG+ S +P A AL
Sbjct: 68 VDKALSECIVPIGAENEKLCESMNYSLLAGGKRVRPILCIASSEIFGGEIESTLPTALAL 127
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIH+MSLVHDDLP MDNDD RRGKPTNH V+GE AILAGDALLS +FE VA + +
Sbjct: 128 EMIHSMSLVHDDLPAMDNDDLRRGKPTNHVVYGEALAILAGDALLSKSFEIVAKHTKGVD 187
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCG 184
+RVV +A LG VG GL G+ MD++ EGK D +L +L IH HKT LL+AA G
Sbjct: 188 AERVVDVLARLGECVGEVGLAGGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTG 247
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
++GG EVE + +++ IGL FQV DDILD T++S++LGKTAGKD K TY KL+
Sbjct: 248 AVLGGAEPSEVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLL 307
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G++ ARK A L+ A L F +RA L +A++I R++
Sbjct: 308 GMDGARKEAKRLVDDALAALEPFG-SRAEALKAIAHFIIEREN 349
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/267 (52%), Positives = 186/267 (69%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA +H +MRYS+ AGGKRVRPVL +A+CE VGG+ +SA+P ACA+EMIHT SL+HDDLP
Sbjct: 29 PASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGELNSALPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRG PTNHKV+GE TAILAGDALL+ AF ++ + P +R I E+ A
Sbjct: 89 MDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSCNGEGMEPGARLRVIHEIAHAS 148
Query: 141 GSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+V G+++D++SEGK D+ + L IH HKT L+ A+V G I+GG N + +
Sbjct: 149 GSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGANEETFDALT 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+YA IGL FQ+ DD+LDV +++ELGK AG D KATYP L+G+E +++ A +L+
Sbjct: 209 RYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQARGKATYPALVGLEASKRRAEELVQI 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A L F+ RA PL +A YI R+
Sbjct: 269 ALNALEPFD-ERAEPLRAIASYIVKRK 294
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 225/293 (76%), Gaps = 6/293 (2%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+++KA+ V+ ALD T+Q LR P + E+MRYS+LAGGKR+RPVL IA+CELVGG ++A+
Sbjct: 71 LSAKARAVHDALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAV 130
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDD+PCMD+D RRG+P+NH FGE TA+LAGDALL+LAFEHVA
Sbjct: 131 PVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVAR 190
Query: 120 KS--TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK---DVSLNELENIHLHKTA 174
S + DR +RA+ ELGS G G+ AG++ D+ SEG VSL LE IH+HKTA
Sbjct: 191 GSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGALEYIHVHKTA 250
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
+L+EAA V G ++GGG EVERVR+YA +GLL QVVDD+LDVT +S++LGKTAGKD+
Sbjct: 251 RLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVA 310
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ KATYP+LMG++ AR + +LLA+A EL + AR APL HLA ++A RQH
Sbjct: 311 AGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAARTAPLRHLARFMAHRQH 363
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 187/288 (64%), Gaps = 61/288 (21%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA V+KALDE V ++ P KIHEAMRYSLLAGGKR S+AMP
Sbjct: 74 MIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKR-----------------SNAMP 116
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGD+LL+ AFEH+A
Sbjct: 117 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLATA 176
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
++ +S R+V A+ EL ++G+EGLVAG+++DI S G+ DV L++LE IH+HKTA LLEA
Sbjct: 177 TSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTAALLEA 236
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G ++GGG+ ++AT
Sbjct: 237 AVVLGALLGGGS-------------------------------------------DEEAT 253
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKLMG+E +R+FA +L +A E+L+ F++ +AAPL LA YIA RQ+
Sbjct: 254 YPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 301
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 190/289 (65%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ +++V++ALD + +P+ IHEAMRYS+ AGGKR+RP+L +A+ + VGG+
Sbjct: 7 LKQWSQKVDEALDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVGGNTEKV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MPVACA+E+IHT SLVHDDLP MDNDDFRRG+PTNHKV+GE AIL GDAL +LAFE +A
Sbjct: 67 MPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLAFELIA 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ DRV + E+ A GS GL+ G+++DI SE +D+ + LE IH HKT L
Sbjct: 127 QTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKTGALFR 186
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A++ G I+GG + ++ + YA +GL FQ+ DD+LD+ ++GK G D+ + K+
Sbjct: 187 ASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKNQKS 246
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP + GIE A++ A + A+A + F +A L + ++I +R H
Sbjct: 247 TYPSIYGIEEAKRMATEAAAEAVNAIKIFN-HKAEFLQDIMHFIINRDH 294
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/267 (51%), Positives = 183/267 (68%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA +H +MRYS+ AGGKRVRPVL +A+CE VGG A+P ACA+EMIHT SL+HDDLP
Sbjct: 29 PASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRG PTNHKV+GE TAILAGDALL+ AF ++ + P +R I E+ A
Sbjct: 89 MDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSGNGEGVDPAARLRVIHEIAHAS 148
Query: 141 GSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+V G+++D++SEGK D+ + L IH HKT L+ A+V G I+GG + + +
Sbjct: 149 GSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGADEEAFDALT 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+YA IGL FQ+ DD+LDV +++ELGK AG D KATYP L+G+E +++ A +L+
Sbjct: 209 RYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQARGKATYPALVGLEASKRRAEELVQI 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A L F+ RA PL +A YI R+
Sbjct: 269 ALTALEPFD-ERAEPLRAIASYIVKRK 294
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 225/306 (73%), Gaps = 21/306 (6%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIH---------EAMRYSLLAGGKRVRPVLCIASCELV 51
+T+ AK V++ALD + L PA++ E+MRYS+L+GGKRVRPVL IA+CE V
Sbjct: 80 LTAHAKSVHEALDRALAL--PARLEHEPDHHWLIESMRYSVLSGGKRVRPVLAIAACEFV 137
Query: 52 GGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLS 111
GGD ++A PVACA+EM+H MSLVHD++PCMD+D RRG+P+ H FGE A+LAGDALL+
Sbjct: 138 GGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHAAFGEHAALLAGDALLA 197
Query: 112 LAFEHVAAKSTE----ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-----VSL 162
LAFEH+A + + +R +R++AE+ +A G G+ AG++ D EG+ VSL
Sbjct: 198 LAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLADKACEGRGSRVGVVSL 257
Query: 163 NELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSS 222
LE++H+HKTA+LLEAA V G I+GGG EVERVR+YAR +GLLFQVVDD+LDVT++S
Sbjct: 258 ATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVGLLFQVVDDVLDVTRTS 317
Query: 223 KELGKTAGKDLVSDKATYPKLM-GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYY 281
ELGKTAGKDLV+DK+TYPKL+ G++ AR +A +LLA A EL + RAAPL LA +
Sbjct: 318 VELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELEGVDARRAAPLRQLARF 377
Query: 282 IASRQH 287
+A RQ+
Sbjct: 378 VAYRQN 383
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 165/205 (80%)
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDDFRRGKPTNH V+GED A+LAGDALLS +FEH+ + +S DR++RAI EL +GS
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EGLVAG+++D+ SEG DV L+ LE IHLHKTA LLE +VV G I+GGG+ E+E++RK+A
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
R IGLLFQVVDDILDVTKSS+ELGKTAGKDLV+ K TYPKL+GIE +R+FA L +A E
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKTTYPKLLGIEKSREFAEKLNKEAQE 180
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
+L+ F+ +AAPL LA YIA R++
Sbjct: 181 QLSEFDQRKAAPLIALANYIAYREN 205
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/261 (49%), Positives = 181/261 (69%), Gaps = 1/261 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
EA RYSL AGGKR+RP+LC+A+ E+ GG +AMP ACALEMIHT SL+HDDLP MDNDD
Sbjct: 36 EAARYSLFAGGKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDD 95
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
FRRGKPTNHKVFGE A+LAGDALL+ AF+ V+ +I P +++ +A L A G G+
Sbjct: 96 FRRGKPTNHKVFGEAIAVLAGDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGM 155
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
+ G+++D++ E + V L +E +H+HKT LL A++ G ++GGG+ +V +++Y +
Sbjct: 156 IGGQVIDLECENRTVDLATVEYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHL 215
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DD+LDV ++E+GK G D +K TYP L+GI +R+ A + + A + LA
Sbjct: 216 GLAFQITDDLLDVEGDAREMGKKPGSDAAKNKKTYPALLGITRSREAAREHVDAALQALA 275
Query: 266 YFEVARAAPLYHLAYYIASRQ 286
F+ RA PL +A Y+ R+
Sbjct: 276 AFD-DRAEPLRAIARYLLVRK 295
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 179/257 (69%), Gaps = 6/257 (2%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-- 56
+ +A+ V++AL++ + HPA IHEAMRYS+ AGGKR+RP+L +A+ E VG DE+
Sbjct: 7 LKRRARLVDEALEKYLPPDHEHPAVIHEAMRYSVFAGGKRLRPILVLAAAEAVG-DEAGA 65
Query: 57 -SAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
SAMPVACALE+IHT SLVHDDLP MDNDDFRRG+PTNHKV+GE AILAGDALL+ AFE
Sbjct: 66 ASAMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILAGDALLTTAFE 125
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+ + + SP V R + E+ A GS+GL+ G+++D SE K V + LE IH HKT
Sbjct: 126 LMGQSAGKFSPQAVNRVVVEIAQAAGSQGLIGGQVVDTLSENKKVEASVLEYIHRHKTGA 185
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L AA+ G I+ G + +++ + YA +GL FQ+ DD+LD+ +++GK G D+ +
Sbjct: 186 LFRAAIRSGAILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGKPVGSDVKN 245
Query: 236 DKATYPKLMGIENARKF 252
KATYP L G+E ARK
Sbjct: 246 QKATYPALYGMEKARKM 262
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 185/270 (68%), Gaps = 3/270 (1%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P IH++MRYS+LAGGKR+RPVL +A+ E VGGD +P ACA+EMIHT SL+HDDLP
Sbjct: 31 YPETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLP 90
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELG 137
MD+D++RRGKPTNH V+GE AILAGDALL+LAFE +++ E I P +V+R I E+
Sbjct: 91 AMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEIS 150
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A GS GL+ G+++DI SE D+S L+ IH+HKT L +AA+ G I+ + ++
Sbjct: 151 LAAGSRGLIGGQVVDIGSENLDISAETLKYIHIHKTGALFKAALKTGAILSSASEEQITA 210
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +YA +GL FQ+ DDILD+ +++LGK G D+ KATYP + G++ A++ A + +
Sbjct: 211 LSRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSDIKKKKATYPSIFGLQEAKQMAREAV 270
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
A++ L F+ RA L +A Y+ R +
Sbjct: 271 AESLMSLEGFD-ERADFLREMARYLLERDN 299
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/282 (48%), Positives = 181/282 (64%), Gaps = 3/282 (1%)
Query: 8 VNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
V ALD + R P + AMRYSLL GGKR+RP+L +A CE VGG AM ACA+
Sbjct: 14 VESALDRLLPAADREPRALTGAMRYSLLIGGKRLRPILTLACCEAVGGALERAMNFACAM 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E +HT SL+HDDLP MDNDD RRG PT H+ +GE TAILAGDALL+ AFE A T +
Sbjct: 74 ECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDALLTHAFELAAKPVTGVL 133
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
P+ + I EL A G+ G+V G+++DI E + + L +L+NIH+HKT L+ A + G
Sbjct: 134 PEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNIHIHKTGALIRVACLAGA 193
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
+GGG +V+ +++Y +GL FQ+ DDILD +K LGK G D DKATYPKLMG
Sbjct: 194 RLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGKATGVDRALDKATYPKLMG 253
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ AR+ A +L+ +AT L F +A PL LA Y+ +R H
Sbjct: 254 LAQAREAAENLMQEATRCLTEFG-PQADPLRALAQYVIARTH 294
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 186/291 (63%), Gaps = 5/291 (1%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ +A V++AL+E + +P IHEAMRYS+ AGGKR+RP L +A VGGDE S
Sbjct: 7 LARQANMVDEALNEYLPKAGSYPPLIHEAMRYSVFAGGKRLRPALVLAGARAVGGDEKSV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ACA+E++HT SLVHDDLP MDNDDFRRG PTNHKV+GE A+LAGDALL+LAF +A
Sbjct: 67 LQAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLAFGLLA 126
Query: 119 --AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+++ DRVVR IAE+ A G+ GL+ G+++D+ S GK + LE IH+HKT L
Sbjct: 127 GVSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVHKTGAL 186
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
A+V G I+ G ++ + YA +GL FQ+VDDILD+ ++LGK G D +
Sbjct: 187 YRASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGSDTKNQ 246
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP L G+ AR A QA LA F A A L L ++ +R++
Sbjct: 247 KATYPALHGLAAARSIARQAAEQANGALASFG-AEADFLRGLVCFVINREY 296
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 187/289 (64%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T+ A++V++AL + +PA +HEAMRYS+ AGGKR+RP+L +A+ + VGG+
Sbjct: 7 LTAWARQVDEALHNYLPPADAYPAVLHEAMRYSVFAGGKRLRPILVLAAAKAVGGNTDKI 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MPVACALE+IHT SLVHDDLP MDNDD+RRG+PTNHKV+GE TAIL GDALL+LAFE VA
Sbjct: 67 MPVACALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALLTLAFELVA 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ P V R E+ A GS GL+ G+++D+ SE K + + LE IH HKT L
Sbjct: 127 RCGEDCPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIHRHKTGALFR 186
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AAV G I+GG ++ + YA +GL FQ+ DD+LD+ ++GK G D+ + K
Sbjct: 187 AAVRAGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKNQKV 246
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L G++ AR+ A + +A L F A L + ++I +R H
Sbjct: 247 TYPSLYGLDGARRMADEAAREAVTALNIFG-PEAEFLRLMMHFIINRDH 294
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/263 (52%), Positives = 176/263 (66%), Gaps = 3/263 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
EAMRYSLLAGGKRVRP+LC+A+ E VG D +PVA ALE IHT SL+HDDLP MDNDD
Sbjct: 53 EAMRYSLLAGGKRVRPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDD 112
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV--VRAIAELGSAVGSE 143
RRG PT+HK FGE AILAGD LLS AFE +A E P +R +A + +AVG
Sbjct: 113 LRRGMPTSHKKFGEAAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPR 172
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++DI++EG+ + L+EL+ IH HKT L+ AAV G I GG + +++ + +Y +
Sbjct: 173 GMVGGQVLDIEAEGRRLELDELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQ 232
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+VDD+L+VT + LGK AG D KATYP L+G+E A + +A A
Sbjct: 233 QTGLAFQIVDDLLNVTSDTATLGKAAGSDAARGKATYPALLGLEATEDKAREAVAAAVAA 292
Query: 264 LAYFEVARAAPLYHLAYYIASRQ 286
L F+ RA PL LA YI SR+
Sbjct: 293 LESFD-HRAEPLRELARYIHSRK 314
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 187/290 (64%), Gaps = 13/290 (4%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
S K + L+++V LR+P KIH +MRYS+LA KR P++CIA+CE VGG + A+
Sbjct: 84 WNSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQQAL 143
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+HT SL+HDDLPCMD+D RRG+P+NH VFG D A+LAGDAL L FE++ +
Sbjct: 144 PTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVS 203
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK---DVSLNELENIHLHKTAKL 176
++++ PDR+V+ IA++ VGS+G+V G+ MD+ S G D SL +E IH K +
Sbjct: 204 STSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSL--VEFIHERKFGIM 261
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV-S 235
E + V G IIGG EVER+R Y R +G+L+Q+ DDIL+ E G ++
Sbjct: 262 AECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILE------EEALLEGNGVIRK 315
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K +YP+ G+E AR+ A L + A EL+ F+ ++APLY Y R
Sbjct: 316 NKTSYPRAYGLEKAREIAETLRSNAKMELSGFDRGKSAPLYSFVDYAIDR 365
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 140/289 (48%), Positives = 187/289 (64%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S A V+KAL+E + +P+ IHEAMRYS+ AGGKR+RP+L IA+ E VGG
Sbjct: 7 LKSYALAVDKALNEYLPAAEVYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVGGSMEQV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MPVACALE+IHT SLVHDDLP MDNDDFRRG+PTNHKV+GE AIL GDALL+ AFE +A
Sbjct: 67 MPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQAFEVIA 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ ++SPD+V + E+ A GS GL+ G+++D SE + + LE IH HKT L
Sbjct: 127 GTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHKTGALFR 186
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AV G I+ G + E+ + YA +GL FQ+ DD+LD+ ++GK G D+ + KA
Sbjct: 187 VAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVKNKKA 246
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L G+E AR+ A A+A L F +A L + ++I +R H
Sbjct: 247 TYPALYGLEKAREMAARAAAEAVAALEIFG-PKAEFLRSIMHFIINRDH 294
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 173/266 (65%), Gaps = 3/266 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+HE+MRYSL+AGGKRVRP+L IA+ E +G M VAC+LE IHT SL+HDDLP MDN
Sbjct: 62 LHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDN 121
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TEISPDRVVRAIAELGSAVG 141
DDFRRGKPTNHKV+GE AILAGDALL++AF+ ++ P R VR + EL G
Sbjct: 122 DDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSG 181
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
+ G+V G++ DI +E +D+ L L+NIH HKT L+ AAV G + G +++ + Y
Sbjct: 182 NMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGY 241
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A IGL FQ+ DD+L+VT + +ELGK D K TYP G+E ARK A D + +A
Sbjct: 242 AEDIGLAFQIADDVLNVTGTREELGKNPNTDAERGKKTYPTFYGVEGARKLADDCVTRAI 301
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
L F + A PL +A YI +R++
Sbjct: 302 GRLNTFGPS-ADPLREIARYITARKN 326
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 178/264 (67%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I+E+MRYSL+ GGKR+RPVL +AS E VGG + + A ALE+IHT SL+HDDLP MDN
Sbjct: 27 INESMRYSLIGGGKRIRPVLALASAETVGGKPEAILQAAVALELIHTYSLIHDDLPAMDN 86
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG+ +NHKVFGE AILAGDALL+ AFE + P+R++R I E+ A G +
Sbjct: 87 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFE-LLGNLDHAQPERLLRVITEVAMAAGKD 145
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ EG+D++LNE+E IH KT +L + G I+GGG+ E++ + +YA+
Sbjct: 146 GMVGGQVLDLAGEGRDLTLNEIEEIHKAKTGAILTVSARLGGILGGGSEDEIDALTEYAQ 205
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILD+ S+ LGK AG DL K+TY L+G+E A K D + +A
Sbjct: 206 SLGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGASKQLHDQIIKAQAA 265
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L F + L LA+YI R+H
Sbjct: 266 LEPF-ADKGLFLKELAFYIEERKH 288
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 180/266 (67%), Gaps = 3/266 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K++EA++YSL GGKR+RP+LC+A CE+VGG+ + A+ ACA+EMIHT SL+HDDLP MD
Sbjct: 31 KLYEAVKYSLTVGGKRLRPILCLAGCEIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND RRG PT FGE TAILAGDALL+ AFE +A E +R V+ I+E+ A G
Sbjct: 91 NDTLRRGHPTTWVKFGEATAILAGDALLNRAFEVLA--DWEFDCNRKVKVISEIARASGM 148
Query: 143 EGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+V G+ D+D+EG+ DV L EL IH HKT +L+ A+VV G I GGG+ E++ +R+Y
Sbjct: 149 LGMVLGQQCDLDAEGRGDVPLEELLFIHKHKTGRLITASVVSGGITGGGSPEEIDALRRY 208
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
+GL FQ++DD+LDV ++LGK G DL K T+ + G+E ARK A + + +A
Sbjct: 209 GDSLGLAFQIIDDVLDVVGDQEKLGKNVGSDLEKGKTTFVTIFGVEKARKMAYEEVERAV 268
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
E L+ F + PL +A ++ R++
Sbjct: 269 EALSIFPAEKREPLEAIARFVVEREY 294
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 178/267 (66%), Gaps = 1/267 (0%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P +H+AM YSL AGGKR+RP+L +A+ E VG +P ACA+E IHT SL+HDDLP
Sbjct: 31 YPPAVHQAMHYSLFAGGKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLP 90
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRG+PT HKV+GE A+LAGDALL+LAFE ++ I P+R++RA EL ++
Sbjct: 91 AMDNDDYRRGRPTCHKVYGEAIALLAGDALLTLAFEVLSRIPATIPPERILRATRELAAS 150
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS+GL+ G+++D+++EG+ V+L ++ IH HKT L+ A + G I+GG ++ +
Sbjct: 151 AGSQGLIGGQVVDMEAEGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLALLT 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+Y +GL FQ+ DDILD+T + GK G D KATYP +G+E +R+ A +L A+
Sbjct: 211 RYGEALGLAFQITDDILDITGDFSQTGKQGGVDAARGKATYPACLGVEASRQKAGELCAE 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A LA A PL LA ++ RQ
Sbjct: 271 AG-ALARALGPAAEPLELLAGFVLRRQ 296
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 186/289 (64%), Gaps = 53/289 (18%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M +A ++ ALD++V L++P I+E+MRYSLLAG
Sbjct: 67 MKERATLIDAALDKSVPLQYPEIINESMRYSLLAG------------------------- 101
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
RRGKPTNHKV+GE+ AILAGDALLSL+FE++A +
Sbjct: 102 --------------------------RRGKPTNHKVYGEEIAILAGDALLSLSFEYIARE 135
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHLHKTAKLLE 178
+ ++ DRV++ I E+G AVGSEGLVAG+ +DI SEG + V L+ L+ IH HKTA LLE
Sbjct: 136 TRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQYIHEHKTAVLLE 195
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AAVV G I+GG ++V+R+RKY+R IGL FQVVDDILD+T +++ELGKTAGKDL S K
Sbjct: 196 AAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELGKTAGKDLASAKT 255
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G+E +R+ A +L+ +A L ++ ARAAPLY LA YI R++
Sbjct: 256 TYPSLVGLERSREIADELIEEAKSMLTTYDPARAAPLYALAEYIRCRKN 304
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 186/288 (64%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + V K L + + P I+EAMRYS+ AGGKR+RPVLC++SCEL+GGD A+
Sbjct: 6 LREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E+IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGD LL+L +E +
Sbjct: 66 PVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVR 125
Query: 120 KSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E D R+++A E+ +A G +G++ G+++DI S+ +++ EL+ +H HKT L+
Sbjct: 126 HALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+V G I G E+ +R+YAR IG FQ+ DDILDV ++LGK G D K
Sbjct: 186 EASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ + G+E +++ +L A + L F +A L L+ Y+ R
Sbjct: 246 FTFVNIFGLEKSQEMVVELTQNAIKILDRFG-EKAEFLKELSNYLIER 292
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+HEAMRY++ GG+R P+ CIA+CELVGG + AMP ACALEMI V DDLP +D+
Sbjct: 1 MHEAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
+ R GKPT H+ FG TA+ AG ALL+L FEH+AA+ S D R +AE+ A+GS
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAAR---YSGDTAARMVAEVSRAIGST 116
Query: 144 GLVAGEIMDIDSEGKD--VSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
GL+AG+ +D+ E D V L LE +HLHKT+ LLEA++V G I GG + E+E +R Y
Sbjct: 117 GLLAGQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAY 176
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
R GLL+Q+VDD+ D TK+ +ELGK G+D ++ K+TY ++G++ +R+ +LL +A
Sbjct: 177 GRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGELLVEAK 236
Query: 262 EELAYFEVARAAPLYHLAYYIAS 284
E L FE +A PL HLA + A+
Sbjct: 237 ERLGVFEETKALPLIHLANHFAN 259
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 174/268 (64%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P I +A+RYSLLAGGKR+RP+LC+A+ E VGGD + +PVACALE IHT SL+HDDLP
Sbjct: 35 PPVIFQAVRYSLLAGGKRLRPILCLAAAEAVGGDSKTILPVACALEYIHTYSLIHDDLPA 94
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TEISPDRVVRAIAELGS 138
MDNDD+RRG+ T HKVFGED AILAGDALL+ AF + K I P+ ++ AE+ +
Sbjct: 95 MDNDDYRRGRLTAHKVFGEDIAILAGDALLTEAFHLLTRKELMPGIPPEYILTVTAEIAA 154
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G G+V G+++D+ SEGK V L L+ IH KT +L+ ++ G I+ G + +
Sbjct: 155 AAGWFGMVGGQVLDVRSEGKKVDLETLQQIHRLKTGELIRVSLRSGAILSGASTEMTASL 214
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
Y R IGL FQ+ DDIL+V LGK G D K T+P L+GIE +R A L+
Sbjct: 215 SDYGRQIGLAFQIADDILNVEGDRVLLGKQTGSDAARRKVTFPSLLGIEASRAHAESLIK 274
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQ 286
+A + LA F+ RAAPL + YI R+
Sbjct: 275 EALKSLASFD-DRAAPLRLITGYILERK 301
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+H+AMRY++ GG+R P+ CIA+CELVGG + AMP ACALEMI V DDLP +D+
Sbjct: 1 MHDAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
+ R GKPT H+ FG TA+ AG ALL+L FEH+AA+ S D R +AE+G A+GS
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAAR---YSGDTAARMVAEVGRAIGST 116
Query: 144 GLVAGEIMDIDSEGKD--VSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
GL+AG+ +D+ E D V L LE +HLHKT+ LLEA++V G I GG + E+E +R Y
Sbjct: 117 GLLAGQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAY 176
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
R GLL+Q+VDD+ D TK+ +ELGK G+D ++ K+TY ++G++ +R+ LL +A
Sbjct: 177 GRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQLLVEAK 236
Query: 262 EELAYFEVARAAPLYHLAYYIAS 284
E L FE +A PL HLA + A+
Sbjct: 237 ERLGVFEETKALPLIHLADHFAN 259
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 185/288 (64%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + V K L + + P I+EAMRYS+ AGGKR+RPVLC++SCEL+GGD A+
Sbjct: 6 LREKQQLVEKELHRILDIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E+IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGD LL+L +E +
Sbjct: 66 PVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVR 125
Query: 120 KSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E D R+++A E+ +A G +G++ G+++DI S+ ++ EL+ IH HKTA L+
Sbjct: 126 HALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHKTAALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+V G I G +V +R+YAR IG FQ+ DDILDV ++LGK G D K
Sbjct: 186 EASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDREKGK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ + +E +++ +L A + L F +A L L+ Y+ R
Sbjct: 246 FTFVNIFELEKSQEMVVELTQNAVKILDRFG-EKALFLKELSNYLIER 292
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 180/267 (67%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P I+EAMRYS+ AGGKR+RPVLC+++CEL+GGD A+PVAC++E+IHT SL+HDDLP
Sbjct: 27 PEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPA 86
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD--RVVRAIAELGS 138
MDNDD RRGKPTNHKVFGE AILAGD LL+L +E + + E D ++++A E+ +
Sbjct: 87 MDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYEVLIRHALENPEDYEKILKAANEIAT 146
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G++ DI S+ +++ EL+ IH HKTA L+EA+V G + G + EVE +
Sbjct: 147 ASGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELL 206
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
R+YA IGL FQ+ DDILDV K LGK G D K T+ + G+E +++ +L
Sbjct: 207 REYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSDREKGKFTFVNIFGVEKSQEMVKELTD 266
Query: 259 QATEELAYFEVARAAPLYHLAYYIASR 285
+A + L F RA L L+ Y+ R
Sbjct: 267 EAIKILDTFG-ERAQFLKDLSNYLIER 292
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
Query: 28 MRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFR 87
MRYSLLAGGKRVRP LCIA+CELVGG + AMP ACA+EMIHTMSL+HDDLPCMDNDDFR
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 88 RGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP-DRVVRAIAELGSAVGSEGLV 146
RGKPTNHKVFGEDTA+LAGDALLS AFEH+A +++ P DR +R I+ELG + S+GLV
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120
Query: 147 AGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+++DI SEG +V L LE IH+HKTA LLE +VV G I+GG E+ R+R+YA
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 7 RVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
RV +AL E V Q+ A + EAM YSL+AGGKR+RPVL + SC + GGD A+P ACA+
Sbjct: 16 RVEEALRERVGQMGRYADLREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAV 75
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MD+D+ RRG+PTNH V+GE TAILAGD LL+ AF+ + +++
Sbjct: 76 EMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAFQTL--TQAQLT 133
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
+VV A+A L A G +G+V G+ +D+ EG+ ++ ELE + KT L+ AA G
Sbjct: 134 AQQVVDAVACLSLAAGPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGC 193
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I GG+ + E VR+YA+C+G FQV DDILDVT + +ELGK G D +K T+ L+G
Sbjct: 194 IAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLLG 253
Query: 246 IENARKFACDLLAQATEELAYFEVARAAP--LYHLAYYIASR 285
++ +R+ +L AQA L F A+P L LA +A R
Sbjct: 254 LDRSRELVAELTAQAVSALDGF----ASPDFLVWLANTLAQR 291
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 192/290 (66%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KA V K L E + + + + EAM YSL AGGKR+RP+L + +C++VGG+E A
Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P A A+EMIHT SL+HDDLP +DNDD RRG+PTNHKV+GE ILAGDALL+ AFE +
Sbjct: 67 IPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVML 126
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
A S + +P++ ++AI E+ G G++ G+++D++SE K + +L+ IH++KTA ++
Sbjct: 127 AGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMM 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
++ G IGG N ++E + KYA+ IGL FQ+VDDILD+ +LGK G D+ + K
Sbjct: 187 VGCMIAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+TYP L+G++ +++ A +L+ +A + + L LA YI R++
Sbjct: 247 STYPSLLGLDKSKEIAHNLIDEAKKSIEKLS-DDVDFLKGLAEYIIDREY 295
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 185/288 (64%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQL-RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + V K L + + P I+EAMRYS+ AGGKR+RPVLC++SCEL+GGD A+
Sbjct: 6 LREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E+IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGD LL+L +E +
Sbjct: 66 PVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVR 125
Query: 120 KSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E D R+++A E+ +A G +G++ G+++DI S+ +++ EL+ +H HKT L+
Sbjct: 126 HALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+V G I E+ +R+YAR IG FQ+ DDILDV ++LGK G D K
Sbjct: 186 EASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ + G+E +++ +L A + L F +A L L+ Y+ R
Sbjct: 246 FTFVNIFGLEKSQEMVVELTQNAIKILDRFG-EKAEFLKELSNYLIER 292
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 191/290 (65%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KA V K L E + + + + EAM YSL AGGKR+RP+L + +C++VGG+E A
Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P A A+EMIHT SL+HDDLP +DNDD RRG+PTNHKV+GE ILAGDALL+ AFE +
Sbjct: 67 IPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVML 126
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
A S + +P++ ++AI E+ G G++ G+++D++SE K + +L+ IH++KTA ++
Sbjct: 127 AGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMM 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ G IGG N ++E + KYA+ IGL FQ+VDDILD+ +LGK G D+ + K
Sbjct: 187 VGCMRAGATIGGANFEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+TYP L+G++ +++ A +L+ +A + + L LA YI R++
Sbjct: 247 STYPSLLGLDKSKEIAHNLIDEAKKSIEKLS-DDVDFLKGLAEYIIDREY 295
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 191/290 (65%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KA V K L E + + + + EAM YSL AGGKR+RP+L + +C++VGG+E A
Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P A A+EMIHT SL+HDDLP +DNDD RRG+PTNHKV+GE ILAGDALL+ AFE +
Sbjct: 67 IPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVML 126
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
A S + +P++ ++AI E+ G G++ G+++D++SE K + +L+ IH++KTA ++
Sbjct: 127 AGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMM 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ G IGG N ++E + KYA+ IGL FQ+VDDILD+ +LGK G D+ + K
Sbjct: 187 VGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESKLGKKVGSDIENHK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+TYP L+G++ +++ A +L+ +A + + L LA YI R++
Sbjct: 247 STYPSLLGLDKSKEIAHNLIDEAKKSIEKLS-DDVDFLNGLAEYIIDREY 295
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 186/275 (67%), Gaps = 4/275 (1%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T++ P I E+ YSL GGKR+RP+L + SC+ VGGD + A+P+ A+EMIHT SL+
Sbjct: 22 TIKEGKPKSIFESFNYSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLI 81
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRA 132
HDDLPCMD+D+ RRGKPTNH V+GE TA+LAGD+LL+LA+E + AKS++ +R V A
Sbjct: 82 HDDLPCMDDDELRRGKPTNHTVYGEATALLAGDSLLNLAYETMLKGAKSSK-DINRYVEA 140
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
+ + + G +G++AG++MD++SEGK+ L+ IH +KT +L A+V+ G ++GG
Sbjct: 141 MNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHDNKTGAILRASVISGAVVGGATD 200
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
E++ + +YAR IGL+FQVVDDILDV + LGK G D +K TYP + G+E + +
Sbjct: 201 DELKNLSEYARAIGLMFQVVDDILDVVSDEETLGKKVGMDSERNKMTYPYVYGLERSYEK 260
Query: 253 ACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+LL + L+ F + A L LA Y+A R++
Sbjct: 261 VDELLNISLNSLSDFG-SEADFLRELALYLAKRKN 294
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 190/287 (66%), Gaps = 3/287 (1%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + +NK L+E + L P + EAM+YS+ AGGKR+RPVLCI++CELVGG++ A+
Sbjct: 6 LREKIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNKEDAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGDALL+ FE +
Sbjct: 66 PVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQ 125
Query: 120 KSTEISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ + + +++A E+ A G G++AG+++D+ SE K++ +L+ +H HKT L++
Sbjct: 126 QALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTGALIK 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+++ G IIGG + ++++ YA +G FQV DDILDV +LGK G D+ + K+
Sbjct: 186 ASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDIANGKS 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ ++G++ + + +L +A L F + L L Y+A R
Sbjct: 246 TFVSVLGLQRSVELVNELTEKAISILNDFG-NKGEFLKSLTKYMAER 291
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 191/290 (65%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KA V K L E + + + + EAM YSL AGGKR+RP+L + +C++VGG+E A
Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P A A+EMIHT SL+HDDLP +DNDD RRG+PTNHKV+GE ILAGDALL+ AFE +
Sbjct: 67 IPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVML 126
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
A S + +P++ ++AI E+ G G++ G+++D++SE K + +L+ IH++KTA ++
Sbjct: 127 AGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMM 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ G IGG N ++E + KYA+ IGL FQ+VDDILD+ +LGK G D+ + K
Sbjct: 187 VGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+TYP L+G++ +++ A +L+ +A + + L LA YI R++
Sbjct: 247 STYPSLLGLDKSKEIAHNLIDEAKKSIEKLS-DDVDFLKGLAEYIIDREY 295
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 186/290 (64%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + +N L++ + + P +++AMRYS+ AGGKR+RPVLCI+SCELVGGD A+
Sbjct: 6 LMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE---H 116
PVACA+E IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGDALL+ FE H
Sbjct: 66 PVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIH 125
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A S ++RA E+ A G G++ G+++D+ SE K+++ EL+ +H HKT L
Sbjct: 126 HALDSANCQ--NILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGAL 183
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
++A+VV G I+GG + ++++ YA IGL FQ+ DDILDV +LGK DL +
Sbjct: 184 IKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDLENG 243
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K+T+ + G++ + +L A A L F ++ L L Y+A R
Sbjct: 244 KSTFVSVFGLQRSISLVKELTASAIRILDDFG-EKSEFLKSLTKYMADRD 292
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 186/290 (64%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + +N L++ + + P +++AMRYS+ AGGKR+RPVLCI+SCELVGGD A+
Sbjct: 6 LMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE---H 116
PVACA+E IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGDALL+ FE H
Sbjct: 66 PVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIH 125
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A S ++RAI E+ A G G++ G+++D+ SE K+++ EL+ +H HKT L
Sbjct: 126 HALDSANCQ--NILRAIEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGAL 183
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
++A+VV G I+GG + ++++ YA IGL FQ+ DDILDV +LGK D +
Sbjct: 184 IKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDSENG 243
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K+T+ + G++ + +L A A L F ++ L L Y+A R
Sbjct: 244 KSTFVSVFGLQRSISLVKELTASAIRILDDFG-EKSEFLKSLTKYMADRD 292
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 191/287 (66%), Gaps = 3/287 (1%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + +NK L+E + L P + EAMRYS+ AGGKR+RPVLCI++CELVGG++ A+
Sbjct: 6 LREKIEYINKGLNEFLSLTDRPEVLFEAMRYSVFAGGKRLRPVLCISTCELVGGNKEDAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
VACA+E IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGDALL+ FE +
Sbjct: 66 AVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQ 125
Query: 120 KSTEISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ S + +++A E+ A G G++AG+++D+ SE +++ +++L+ +H HKT L+
Sbjct: 126 QALNSSKSQNILKAADEIARAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHKTGALIR 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+++ G I+GG + ++++ YA +G FQV DDILD+ ++GK G D+V+ K+
Sbjct: 186 ASILAGAIMGGADDDTLKKLSSYAEYLGFAFQVKDDILDILGDEMKIGKDIGSDMVNGKS 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ ++G++ + +L +A L F + L +L Y+A R
Sbjct: 246 TFVSVLGLQRSVDLINELTEKAINILDGFG-EKGEFLKNLTQYMAER 291
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 186/288 (64%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + + K L +++ +P I+EAM+YS+ AGGKR+RPVLC++SCEL GD A+
Sbjct: 6 LKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E+IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGD LL+LAFE +
Sbjct: 66 PVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIR 125
Query: 120 KSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E D R+++A E+ A G +G++ G+++DI S+ ++ EL+ +H HKT L+
Sbjct: 126 HALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+V G I G ++ +R+YA IGL FQ+ DDILDV ++LGK G D K
Sbjct: 186 EASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ + G++ +++ +L +A E L F +A L L+ Y+ R
Sbjct: 246 VTFVNIFGLKKSQQMVVELTQKAIEILDRFG-EKALFLKELSNYLIER 292
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 192/289 (66%), Gaps = 4/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T KAK +N+ L+E + + P K+ +AMRYS+LAGGKR+RP+L + +L+G +E
Sbjct: 7 ITKKAKLINQTLEELLPMEEAKPKKLSQAMRYSVLAGGKRLRPILTLLVAKLIGEEEKKV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACALEMIH SL+HDDLPCMD+DD+RRG+PTNHKV+GE A+LAGD+LL+LAFE +
Sbjct: 67 LPAACALEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDSLLTLAFETI- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ I D+V+ A EL A G++G+V G+ DI +EG+ + LE IH HKT LL
Sbjct: 126 SRINNIDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYIHTHKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AAV G I+ G N E+ + YA+ IGL FQVVDDILD+ ++LGK G DL DKA
Sbjct: 186 AAVRIGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEGDEEKLGKDVGSDLERDKA 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
T+P L G+E A+K A L +A E + F A L LA YI R +
Sbjct: 246 TFPALYGLEEAKKMAQKLCQEAKEAIHIFG-EEAKVLLELADYIIGRDY 293
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 174/264 (65%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
++E+M YSL+ GGKR+RPVL +AS E VGG+ + + A ALE+IHT SL+HDDLP MDN
Sbjct: 27 LNESMYYSLIGGGKRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMDN 86
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG+ +NHKVFGE AILAGDALL+ AFE + A S P+R +R I E+ A G E
Sbjct: 87 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFE-LLADSDLGQPERQLRVIREVAVAAGKE 145
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G++ D+ EGK ++LNE+E IH KT LL + G I+ GG +V+ + YA+
Sbjct: 146 GMVGGQVADLAGEGKSLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEDQVKALTDYAK 205
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILD+ S+ LGK AG DL K+TY L+G+E A + + +A
Sbjct: 206 ALGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGAAQQLHAQILKAQSS 265
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L F+ RA L LA YI R+H
Sbjct: 266 LEVFD-ERAVFLNQLALYIEERKH 288
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 186/288 (64%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLR-HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + + K L +++ +P I+EAM+YS+ AGGKR+RPVLC++SCEL GD A+
Sbjct: 6 LKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKAL 65
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+E+IHT SL+HDDLP MDNDD RRGKPTNHKV+GE AILAGD LL+LAFE +
Sbjct: 66 PVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIR 125
Query: 120 KSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E D R+++A E+ A G +G++ G+++DI S+ ++ EL+ +H HKT L+
Sbjct: 126 HALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+V G I G ++ +R+YA IGL FQ+ DDILDV ++LGK G D K
Sbjct: 186 EASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+ + G++ +++ +L +A E L F +A L L+ Y+ R
Sbjct: 246 VTFVNIFGLKKSQQMVVELTQKAIEILDRFG-EKALFLKELSNYLIER 292
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + +R+ AL + ++ P I AM YSL AGGKR+RP+L A+ G + +
Sbjct: 10 LQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAE 129
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A ISP +R I EL A G EG+VAG++ DI+SEGK +SL +LE IH HKT K+L+
Sbjct: 130 ANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+ G ++ N ++ ++ +A +GL FQ+ DDILD+ +++GK G D+ + K
Sbjct: 190 YSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDMENKKV 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ I A++ +A+A L E+ + L ++ +A+R H
Sbjct: 250 TYPSLLTIAGAKEKLSFHIAEAKRYLQKAEI-DGSVLTYICDLVATRDH 297
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 191/291 (65%), Gaps = 6/291 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M + V++ L E + + +P IHEAM YS+ AGGKR+RP+L +A+ +L G ++ +
Sbjct: 7 MKNNKNLVDQKLQEYLPNKSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKTI 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+E+IHT SL+HDDLP +DNDD RRGK TNH VFGED AILAGDALL+ AFE +
Sbjct: 67 LPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYAFELMT 126
Query: 119 AKSTEISPD--RVVRAIAELGSAVGSEGLVAGEIMDIDSE-GKDVSLNELENIHLHKTAK 175
+K E D + AI+E+ A G++G++ G+++DI SE D+ L + IH HKT
Sbjct: 127 SKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHKHKTGA 186
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L A++ G I+ + ++E++ YA+ +GL FQVVDDILD+ ++LGKT GKD +
Sbjct: 187 LFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQKLGKTVGKDDDN 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+KATYPK+MG++ + ++A L +A ++ + A L LA I +R+
Sbjct: 247 EKATYPKIMGLKESHEYASRLHHEALTAISDYG-EEANILRELANKIVNRE 296
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 187/269 (69%), Gaps = 4/269 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H++MRYS+ AGGKR+RP+L +A+C+ VGGD S AMP ACA+EMIHT SL+HDDLP
Sbjct: 29 PFSLHKSMRYSVFAGGKRIRPILMLAACDAVGGDISLAMPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELGS 138
MD+DDFRRG PTNHKVFGE AILAGDALL+ AF ++ S + P+ V+R I E+
Sbjct: 89 MDDDDFRRGNPTNHKVFGEAIAILAGDALLTEAFILMSRVEPSASLPPEAVLRVIQEISH 148
Query: 139 AVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
GS G+V G+++D++SEGK ++ L ++ IH HKT L++A+V G I+GG + +
Sbjct: 149 CAGSHGMVGGQVVDMESEGKAEMDLATVQYIHTHKTGALIKASVKAGAILGGADEARLAS 208
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ Y IGL FQ+ DDILD+ +++E+GK AG D KATYP +MG+ ++K A +L+
Sbjct: 209 LTTYGEAIGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAESKKRAVELV 268
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
A E LA F+ RA PL +A YI R+
Sbjct: 269 DMALESLAGFD-HRADPLRDIATYIVKRK 296
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + +R+ AL + ++ P I AM YSL AGGKR+RP+L A+ G + +
Sbjct: 10 LQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAE 129
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A ISP +R I EL A G EG+VAG++ DI+SEGK +SL +LE IH HKT K+L+
Sbjct: 130 ADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+ G ++ N ++ ++ +A +GL FQ+ DDILD+ +++GK G D+ + K
Sbjct: 190 YSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKV 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ I A++ +A+A L E+ + L ++ +A+R H
Sbjct: 250 TYPSLLTIAGAKEKLSFHIAEAKRYLQKAEI-DGSVLTYICDLVATRDH 297
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 178/270 (65%), Gaps = 2/270 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P I EAM YSL AGGKR+RP+L +++ M VACALEMIHT SL+HDD
Sbjct: 23 LQAPQTIKEAMLYSLRAGGKRIRPLLLLSTLHAFRKPIGIGMSVACALEMIHTYSLIHDD 82
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MDNDD RRGKPTNHKVFGE AILAGDALL+ AF+ VA T IS D VR I+EL
Sbjct: 83 LPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-ISSDVKVRLISELA 141
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G EG+V G++ D++ EGK +SL +LE IH HKT KLL+ +V G I+G ++
Sbjct: 142 KAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSVRAGAILGEATEQQLTL 201
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +A +GL FQ+ DDILD+ +++GK G D+ +DK+TYP L+ ++ A+K D +
Sbjct: 202 LTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYPSLLTLDGAKKKLSDHM 261
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A + L ++ A+ L+++ + +R H
Sbjct: 262 KEARKLLDEAKI-DASLLHYICDIVETRDH 290
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 183/289 (63%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + +R+ AL + ++ P I AM YSL AGGKR+RP+L A+ G + +
Sbjct: 10 LQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAE 129
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A ISP +R I EL A G EG+VAG++ DI+SEGK +SL +LE IH HKT K+L+
Sbjct: 130 ADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+ G ++ N ++ + +A +GL FQ+ DDILD+ +++GK G D+ + K
Sbjct: 190 YSVLAGALLADANNEQLRHLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKV 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ I A++ +A+A L E+ + L ++ +A+R H
Sbjct: 250 TYPSLLTIAGAKEKLSFHIAEAKRYLQKAEI-DGSVLTYICDLVATRDH 297
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 178/270 (65%), Gaps = 2/270 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P I EAM YSL AGGKR+RP+L +++ M VACALEMIHT SL+HDD
Sbjct: 23 LQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMSVACALEMIHTYSLIHDD 82
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MDNDD RRGKPTNHKVFGE AILAGDALL+ AF+ VA T IS D VR I+EL
Sbjct: 83 LPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-ISSDVKVRLISELA 141
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G EG+V G++ D++ EGK +SL +LE IH HKT KLL+ ++ G I+G ++
Sbjct: 142 KAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSIRAGAILGEATEQQLTL 201
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +A +GL FQ+ DDILD+ +++GK G D+ +DK+TYP L+ ++ A+K D +
Sbjct: 202 LTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYPSLLTLDGAKKKLYDHM 261
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A + L ++ A+ L+++ + +R H
Sbjct: 262 KEARKLLDEAKI-DASLLHYICNIVETRDH 290
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 190/269 (70%), Gaps = 4/269 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P+ +H AMRYS+ AGGKRVRP+L +A+C+ VGGD + A+P ACA+EMIHT SL+HDDLP
Sbjct: 29 PSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TEISPDRVVRAIAELGS 138
MD+DDFRRG+PTNHKVFGE AILAGDALL+ AF +++ S + DR++ I E+
Sbjct: 89 MDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIAL 148
Query: 139 AVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
GS G+V G+++D++SEG K++ L ++ IH KT L++A++ G ++GG N V+
Sbjct: 149 CAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKA 208
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
V +Y IGL FQ+ DDILD+ +++++GK AG D KATYP ++G+ +++ A +LL
Sbjct: 209 VTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAESKRRAQELL 268
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
A E L+ F+ RA PL +A YI SR+
Sbjct: 269 DLAIEALSPFD-HRADPLREIARYIVSRK 296
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 186/289 (64%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + + V AL ++ L PAK+ +AM YSL AGGKR+RP+L +++ +G D + +
Sbjct: 10 LNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITE 129
Query: 120 KSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
E I P +R I L A G EG+VAG+ D++ EGK ++L+ELE IH HKT K+L+
Sbjct: 130 IDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G +IGG + + + ++A +GL FQ+ DDILD+ + +++GK G D ++KA
Sbjct: 190 YSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKA 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ + A++ + A L +V AA L ++ +A+R H
Sbjct: 250 TYPALLSLAGAKEKLAFHIEAAQRHLRNADVDGAA-LAYICELVAARDH 297
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 194/290 (66%), Gaps = 6/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH---PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS 57
+ SKA + +L+E ++L+ ++ EAMRY+LL+GGKR+RP+L + + EL+ GD +
Sbjct: 8 LKSKAAELENSLEELMELKEDELAPELSEAMRYTLLSGGKRIRPILTLLTTELLKGDYQA 67
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
A+ ALEMIH+ SL+HDDLP MD+D RRGK TNH VFGE AILAGDALL+ AFE +
Sbjct: 68 ALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYAFEIL 127
Query: 118 AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E+ P + ++ I + S G G+V G+ +DID+E K++SL E++ IH KT L+
Sbjct: 128 S--ELELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAKTGALI 185
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+A+V+ GV + E E ++KYA +G+LFQVVDD+LDVT +++LGK G D DK
Sbjct: 186 KASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQKLDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+TYPKL+G++ AR+ A + +A LA FE A PL L Y+ SRQH
Sbjct: 246 STYPKLLGVDGAREAAVEYAKKAKNSLAIFE-EEAEPLIKLVDYVLSRQH 294
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 188/289 (65%), Gaps = 7/289 (2%)
Query: 4 KAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS--AM 59
K R+++A+D + + P ++ +AMRYSL AGGKR+RP+LC+A+ E VG SS +
Sbjct: 20 KKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGGKRIRPILCLAAAEAVGTSVSSDCLL 79
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACALE IHT SL+HDDLP MDNDD+RRGKPT+HKVFG+ AILAGDALL+ AFE +
Sbjct: 80 PVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGDALLTEAFELMTR 139
Query: 120 KS--TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
T ++P+ ++R I E+ +A G+ G+V G++ D+ +EGK +L+ L IH KT ++
Sbjct: 140 TDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDTLNRIHNRKTGAMI 199
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
++ G I+ GG+ V + Y IGL+FQ+ DDIL+V LGK+ G D K
Sbjct: 200 VVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGDRTVLGKSTGSDASRGK 259
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
T+P LMG+E +R+ A L+ +A +L F+ RA PL +A Y R+
Sbjct: 260 MTFPLLMGLEPSRQKAFALVEEALRDLDGFD-NRATPLRLMARYFVERR 307
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 181/275 (65%), Gaps = 8/275 (2%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVACALEMIHTMSLVHDDL 78
P IH AMR+S+ AGGKR+RP+L I S ++ GD A V A+EM+HT SL+HDDL
Sbjct: 30 QPHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAADVGAAIEMLHTYSLIHDDL 89
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD-RVVRAIA-EL 136
P +DNDD RRGKPT H V+GE AILAGDAL +LA+E +A S + + +V+ +A
Sbjct: 90 PALDNDDLRRGKPTCHVVYGEAMAILAGDALQTLAYETLAKLSGDAAAKIEIVKEVAIAT 149
Query: 137 GSAVGSEGL----VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
G+ VGSEGL + G++MDI+ EG+ + +E IH KT L+ ++V G +IGG +
Sbjct: 150 GTGVGSEGLAPGMIGGQVMDIEGEGQKPTAELVEAIHRSKTGALITVSIVAGGLIGGASA 209
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
EV +R++ + GL FQ+VDDILDVT+SS ELGKTAGKD SDKAT+P + G++ +R+
Sbjct: 210 DEVMHLRRFGQRAGLAFQIVDDILDVTQSSAELGKTAGKDTASDKATWPAVFGLDASRET 269
Query: 253 ACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
A +LL ELA F ARA L +A + R +
Sbjct: 270 AAELLRDGLAELAGFG-ARADALKAVAKALVERTN 303
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/272 (45%), Positives = 177/272 (65%), Gaps = 2/272 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
++ + I EAM YSL +GGKR+RPVL + +C +VGGD +A+P A A+EMIHT SL+HD
Sbjct: 25 EVGYQKTIMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHD 84
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST-EISPDRVVRAIAE 135
DLP +DNDD RRG+ TNHKVFGE AILAGDALL+ A+E + +S + +P+R +RA E
Sbjct: 85 DLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKESIGKENPERYLRATYE 144
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
+ G G+V G+++D+ SE + +L+ IH +KTA ++ + G IGG + ++
Sbjct: 145 IAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGGADEKQM 204
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E + YA IGL FQ+VDDILD+ +LGK G D+ ++K+TYP LMG+E +R+ A +
Sbjct: 205 ELITDYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNKSTYPSLMGLEKSREIATE 264
Query: 256 LLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+ A ++ L LA YI SR H
Sbjct: 265 LIEDAKRSISKV-TDDTGFLDGLADYILSRDH 295
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/289 (44%), Positives = 182/289 (62%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + +R+ ++L + +L P I AM YSL AGGKR+RP+L A+ G + +
Sbjct: 10 LQQQKQRLEESLPHYIARLNAPGTIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAE 129
Query: 120 KS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S I P +R I EL A G EG+VAG++ DI+ EGK +SL +LE IH HKT K+L+
Sbjct: 130 MSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+ G ++ ++ + +A +GL FQ+ DDILD+ S +++GK G D+ + K
Sbjct: 190 YSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDIENKKV 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ I A++ +A+A L E+ + L ++ +A+R H
Sbjct: 250 TYPSLLTIAGAKEKLSFHIAEAKRYLQKAEINDSV-LSYICDLVATRDH 297
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 178/264 (67%), Gaps = 5/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+M YSL AGGKR+RPVL +A+ + VGGDE S +P ACALE+IHT SL+HDDLP MDNDD
Sbjct: 29 ESMNYSLAAGGKRIRPVLALAAAKAVGGDEESILPAACALELIHTYSLIHDDLPAMDNDD 88
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
+RRG+ +NHK FG AILAGDALL+ AFE +A T ++P+R +R I E+ A G EG+
Sbjct: 89 YRRGRLSNHKAFGVGQAILAGDALLTYAFELLAQSITGVTPERQLRVIREVAQAAGPEGM 148
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+++D+ +E KD++L ELE +H KT +L + G I+ GG ++E + YA+ I
Sbjct: 149 VGGQVLDLAAEEKDLALAELERVHRLKTGAMLVVSARLGAILAGGTEEKIEALTNYAQAI 208
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DDILD+ SK LGK A D+ KATYP LMGIE A+ + + + E A
Sbjct: 209 GLAFQIRDDILDLEGDSKSLGKPAQSDIRQHKATYPSLMGIEGAK---AEFMNKTDEAHA 265
Query: 266 YFEV--ARAAPLYHLAYYIASRQH 287
E R+ L+ LA YIA R++
Sbjct: 266 ALETLGERSGFLHDLADYIAQRKY 289
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 180/278 (64%), Gaps = 2/278 (0%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + + V AL ++ L PAK+ +AM YSL AGGKR+RP+L +++ +G D + +
Sbjct: 10 LNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVE 129
Query: 120 KSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
E I P +R I L A G EG+VAG+ D++ EGK ++L+ELE IH HKT K+L+
Sbjct: 130 IDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G +IGG + + + ++A +GL FQ+ DDILD+ + +++GK G D ++KA
Sbjct: 190 YSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKA 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLY 276
TYP L+ + A++ + A L + +V AA Y
Sbjct: 250 TYPALLSLAGAKEKLAFHIEAAQRHLRHADVDGAALAY 287
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 178/273 (65%), Gaps = 6/273 (2%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ AL + ++HEAMRY+L + G+ + ++CIA+CELVGG + AMP ACA+EM
Sbjct: 48 IQHALPPPFKRPETLQLHEAMRYAL-SQGRLMCAIVCIAACELVGGSQDDAMPGACAVEM 106
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
I T + V DDLP +DN + R GKPT H FG TA+ AG ALL L FEH+AA D
Sbjct: 107 IKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALLVLGFEHLAA---HYRGD 163
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMD--IDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
R + E+ AVGS GL+AG+ +D I + G+ V L LE +HLHKT+ LLEA++V G
Sbjct: 164 TAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAVELETLEFVHLHKTSALLEASLVIGA 223
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I GG + ++E +R Y R GLL+Q+VDDI D TK+++ELGK AG+D ++ K+TY ++G
Sbjct: 224 IAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGKVAGQDAMTGKSTYSTILG 283
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHL 278
++ +R+ LL +A E L FE +A PL HL
Sbjct: 284 VDKSREIVGQLLVEAKERLGVFEETKALPLIHL 316
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 173/253 (68%), Gaps = 2/253 (0%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + + V AL + QL P + +AM YSL AGGKR+RP+L +++ + +G + S +
Sbjct: 10 LNEQKQAVEAALSRYIAQLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQNPSLGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIAE 129
Query: 120 KSTEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
E P D ++ IAEL A G EG+VAG++ D++ EGK ++L ELE IH HKT K+L+
Sbjct: 130 IHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKTGKMLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G ++GG + ++ + ++A +GL FQ+ DDILD+ + +++GK G D + KA
Sbjct: 190 YSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRVGSDRENHKA 249
Query: 239 TYPKLMGIENARK 251
TYP L+ + A++
Sbjct: 250 TYPALLSLAGAKE 262
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 177/272 (65%), Gaps = 7/272 (2%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ P +HEA+ YSL +GGKR+RP+LC+A V A+P+ACA+E IHT SL+HDDL
Sbjct: 32 KKPRILHEAIDYSLFSGGKRLRPILCLAGAHTVCMATDCALPMACAVECIHTYSLIHDDL 91
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDDFRRGKP+ HK++GE AIL GDALL+LAFE + S S + I EL
Sbjct: 92 PSMDNDDFRRGKPSLHKIYGEAMAILTGDALLALAFEIASLCSPLGSSYPLSTMIWELAR 151
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A GS LVAG++ D++SEGK++ L +L IH KTA L+ A+ G + + + +
Sbjct: 152 AAGSRALVAGQVADLESEGKEIGLTQLRYIHCRKTAALITVALRLGAMSANADEKTLRLI 211
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
KY R +GL FQ++DDILDVT++++ LGK+AGKD + KATYP++MG+E ++K A A
Sbjct: 212 TKYGRSLGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPRIMGLEYSKKAA----A 267
Query: 259 QATEELAYFEVA---RAAPLYHLAYYIASRQH 287
T++ Y+ A L LA Y+ +R+
Sbjct: 268 YYTQKSLYYASALGENGKLLSELANYLLARKR 299
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/295 (46%), Positives = 196/295 (66%), Gaps = 9/295 (3%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK------IHEAMRYSLLAGGKRVRPVLCIASCELVGGD 54
+ ++ K++N +D + PA+ IH+AMRYSL AGGKR+RPVL +A C VGGD
Sbjct: 3 LKAELKQLNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGCRAVGGD 62
Query: 55 ESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF 114
E S M ACALEMIHT SL+HDDLP MD+DD RRG PTNH VFGE TAILAGD LL+ AF
Sbjct: 63 EESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLTRAF 122
Query: 115 EHVAAKSTEI--SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
+A + SP V++ IAEL A GS G++ G++MD++SE K + + + IH HK
Sbjct: 123 GVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMAYIHAHK 182
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T L+ A++ G ++GGG++ +VE + +Y +GL FQ+ DD+LD+ +++GK G D
Sbjct: 183 TGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPVGSD 242
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ ++KATYP L+G+E AR+ A ++ A + LA F+ +A L LA Y+ R++
Sbjct: 243 VKNNKATYPALLGLEKARQEAERVVQAALDSLAGFD-EKAELLRELAQYLLVREN 296
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 177/269 (65%), Gaps = 2/269 (0%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ I EAM YSL +GGKR+RP+L + S +++GGD +P A+EMIHT SL+HDDLP
Sbjct: 28 YQKTIFEAMNYSLSSGGKRLRPILTLESAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST-EISPDRVVRAIAELGS 138
MDNDDFRRGKPTNHKVFG+ A LAGDALL+ AFE + +S + + D ++AI E+
Sbjct: 88 AMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKESLGKENADIRLKAIYEIAR 147
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G++ G+++DI+SE K + +L+ IH++KTA ++ + G I+G +++ +
Sbjct: 148 GAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNKTAAMIIGCMRAGAIMGNACEDDLQNI 207
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
KYA+ IGL FQ+VDDILD+ K LGK G D+ + K+TYP L+G++ ++K A DL+
Sbjct: 208 TKYAKNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHKSTYPSLIGLDESKKVATDLIK 267
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A + + + L LA YI SR H
Sbjct: 268 EAKDSIRKIS-GESRFLEDLADYIISRDH 295
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 172/270 (63%), Gaps = 14/270 (5%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ ++M YSL+ GGKR+RPVL +AS E VGG +P A ALE+IHT SL+HDDLP MDN
Sbjct: 16 LDQSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMDN 75
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG+ +NHKVFGE AILAGDALL+ AFE +A + S +R +R I E+ A G
Sbjct: 76 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFEFLADEGLGQS-ERQLRIIREVAVAAGKV 134
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G++ D+ EGK ++LNE+E IH KT LL + G I+ GG +V+ + YA+
Sbjct: 135 GMVGGQVADVAGEGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVKALTDYAQ 194
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA--RKFACDLLAQAT 261
+GL FQ+ DDILDV S LGK AG DL KATY L+G+E A + A L AQ+
Sbjct: 195 ALGLAFQIKDDILDVVGDSATLGKPAGSDLRQGKATYVSLLGLEGAEHQLHAQILKAQSA 254
Query: 262 ----EELAYFEVARAAPLYHLAYYIASRQH 287
E A+F L LAYYI RQH
Sbjct: 255 VKPFAEGAFF-------LSELAYYIEQRQH 277
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 189/289 (65%), Gaps = 6/289 (2%)
Query: 4 KAKRVNKALDETVQL---RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ KRV+KAL+ + R ++ E +RYSLLAGGKR+RPVL +A+ E VGGD S +P
Sbjct: 10 QKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESLLP 69
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ LE++HT SLVHDDLP MDNDD RRG+PTNH V+GE AILAGDALL+ AF ++
Sbjct: 70 LTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLSDP 129
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ + R + + EL SA G G+V G+ +DI SEGK+++L ELEN+H HKT LL
Sbjct: 130 VYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTGALLR 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V G I+ G + VE + +Y +G+ FQ+ DD+LDV +++ELGK A KD K
Sbjct: 190 ASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQKDAGKSKN 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+GI+ AR A + +A E +A F ++ PL +A YI R++
Sbjct: 250 TYPGLVGIDRARILAEEKCREAHEAVAVFG-SKGEPLARIASYIIERRN 297
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 172/269 (63%), Gaps = 3/269 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KA V +AL+ + +P IH AMRYS+L GGKR+RP L +A E VGG+ +
Sbjct: 8 LKKKAALVEEALERYLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVGGNAADV 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+E+IHT SLVHDDLP MDNDD+RRG+ TNHKV+GE AILAGDALL+LAFE +
Sbjct: 68 LPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDALLTLAFE-LL 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A + P+ +VR I E +A G+ GL+ G+++D S GK++ + LE IH HKT L
Sbjct: 127 ANNDRARPENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHKTGALYR 186
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G ++ G ++ + YA +GL FQ+ DDILDV K++GK G D+ + K+
Sbjct: 187 FSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSDVRNRKS 246
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYF 267
TYP L G+E +RK A + A L F
Sbjct: 247 TYPSLFGMEYSRKKARQAVEMAKAALQPF 275
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 171/268 (63%), Gaps = 5/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ E+M YSL AGGKR+RP+LC+ + E VGG++ +P+A ALEM+HT SL+HDDLP
Sbjct: 33 PPRLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGS 138
MDND RRGKPTNH ++G+ AILAGDALL+ AFE+ + + P +V+A++
Sbjct: 93 MDNDSLRRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQ 152
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
AVG G+ G+++D D SL+ + NI L KTA LL+A++V G I+GG +
Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
KY R +GL FQ+VDDILDVT S +ELGKT GKD K T+ G+E ARK A
Sbjct: 213 GKYGRHLGLAFQIVDDILDVTSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMALKESK 272
Query: 259 QATEELAYFEVARAAPLYH-LAYYIASR 285
+A E L F + +A + LA ++ R
Sbjct: 273 EAAESL--FMLGSSAVFFQKLALSLSKR 298
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 178/267 (66%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +M YSLL+GGKR+RP+L + C L GG ++A+P ACA+EMIHT SL+HDDLPCMD
Sbjct: 30 ELFSSMEYSLLSGGKRIRPILTLEFCRLCGGSLTAALPFACAIEMIHTYSLIHDDLPCMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE--LGSAV 140
+D+ RRG+PTNH+V+GE TA+LAGDALL+LAFE + + T + V A A L A
Sbjct: 90 DDELRRGRPTNHRVYGEATALLAGDALLTLAFETMLSPQTIRTAGAVKTATAAGVLARAA 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+ G+V G+I+D+ SEGK + L+ L + KT L+ AA G ++GG ++ R+
Sbjct: 150 GATGMVGGQIIDLASEGKKIPLSTLRVMDERKTGALILAAAEMGCVVGGAGNEKIRAARE 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA+ +GL FQ+VDDILDVT S LGK G D ++DK+TY LMG++ A+K +L +A
Sbjct: 210 YAKALGLAFQIVDDILDVTGDSTLLGKNVGVDDLNDKSTYVSLMGLDGAKKAVRELTDEA 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
LA F+ A L LA ++ R++
Sbjct: 270 VTALAKFD-GDTAYLADLARELSVRKN 295
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 195/285 (68%), Gaps = 6/285 (2%)
Query: 7 RVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV+ ALD + + P +H+AMRYS+ AGGKRVRP+L +A+C+ VGGD A+P ACA
Sbjct: 13 RVDAALDSYLPRETELPHSLHKAMRYSVFAGGKRVRPILMLAACQAVGGDTEVAIPAACA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKST 122
+EMIHT SL+HDDLP MD+DDFRRG PTNHKVFGE AILAGDALL+ AF+ ++ A +
Sbjct: 73 MEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEAFKLLSNPACAA 132
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAV 181
+ + + I ++ S GS G+V G+++D++SEGK D+ L ++ IH HKT L++AAV
Sbjct: 133 GVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYIHTHKTGALIKAAV 192
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
V G ++GG + ++ + +Y GL FQ+ DDILD+ +++E+GK AG D KATYP
Sbjct: 193 VAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKDAGSDQARGKATYP 252
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+MG+ A++ A ++ +A + L F + A PL +A YI +R+
Sbjct: 253 AVMGLAAAKQEATTMMDEAFKALEIFG-SEADPLREIARYIVTRK 296
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L P+ I E+M YSL AGGKR+RP+L A+ + G D +PVA A+EMIHT SL+HD
Sbjct: 27 KLDAPSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP-DRVVRAIAE 135
DLP MDNDD RRGKPTNHKVFG+ AILAGDALL+ +FE + S E +P + ++ + E
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFEVIGLLSNEFAPANTKLKLVVE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
+ A G+EG+V G++ D++ EGK+++L EL+ IH+HKT KLL +VV G I+ + ++
Sbjct: 147 MAKAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKLLRFSVVAGAILADSSQSQL 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
+ + +A +GL FQ+ DDILD+ + + +GK G D + K+TYP+L+ +E AR
Sbjct: 207 DHLSGFAHHLGLAFQIQDDILDLIGNPQVIGKPVGSDTTNHKSTYPQLLSLEGAR 261
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 179/266 (67%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H+++ YSL AGGKR+RP+LCIAS E G E+ +P A A+E IHT SL+HDDLP
Sbjct: 30 PPILHDSVLYSLTAGGKRLRPILCIASYEACDGMEN-IVPYATAIEFIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEISPDRVVRAIAELGSA 139
MDNDD RRGKPTNHKVFGE AILAGD LL+ AF ++ K IS + +++ I+E+ A
Sbjct: 89 MDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANISSNTLLKVISEISKA 148
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G G+VAG+ D+ SEGK+ +E IHL+KTA +++A+V G I+ + +++ +
Sbjct: 149 AGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEASEEKIKNLE 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
Y + IGL FQ+VDDILD+ +++ +GK G D+ K TYP++ GIE +++ A +L+ +
Sbjct: 209 IYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVFGIEKSKQKAKELIDK 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A E L F +A PL +A+YI R
Sbjct: 269 ALESLTMFN-HKAEPLREIAHYIIKR 293
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 2 TSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
T RV++ L++ + PA ++H AMRYSL GGKR+RP+L AS +LVG S
Sbjct: 8 TYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDA 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALE IH SL+HDDLP MDND+ RRGKPT H F E TAILAGDAL + AFE + +
Sbjct: 68 SAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFE-LLSN 126
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
T P+ ++ I EL A G G++ G+++D+ SE K++SL ELE +H+HKT L++A+
Sbjct: 127 PTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKAS 186
Query: 181 VVCGVIIGGGNMIEVERVRK---YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
V G + G ++ E++ K YA IGL FQV DDI+D+T ++ LGKT D ++K
Sbjct: 187 VRMGALSTG--QVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEANK 244
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
ATYPKL+G++ A+ L QA +++ F ++ PL LA YI R H
Sbjct: 245 ATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYIIDRNH 293
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 2 TSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
T RV++ L++ + PA ++H AMRYSL GGKR+RP+L AS +LVG S
Sbjct: 10 TYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDA 69
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALE IH SL+HDDLP MDND+ RRGKPT H F E TAILAGDAL + AFE + +
Sbjct: 70 SAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFE-LLSN 128
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
T P+ ++ I EL A G G++ G+++D+ SE K++SL ELE +H+HKT L++A+
Sbjct: 129 PTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKAS 188
Query: 181 VVCGVIIGGGNMIEVERVRK---YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
V G + G ++ E++ K YA IGL FQV DDI+D+T ++ LGKT D ++K
Sbjct: 189 VRMGALSTG--QVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEANK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
ATYPKL+G++ A+ L QA +++ F ++ PL LA YI R H
Sbjct: 247 ATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYIIDRNH 295
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 171/255 (67%), Gaps = 4/255 (1%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ +KA+ ++ ALD ++ +P IHEAMRYS+ AGGKR+RP L +A+ + VG E
Sbjct: 6 LAAKAETIDAALDRYLRQASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAPERLV 65
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+E+IHT SL+HDDLP MDNDD RRGKPTNH+VFGE A+LAG AL +LAFE +A
Sbjct: 66 LPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAFEVLA 125
Query: 119 A--KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ ++ +R++ + E+ +A G+ GL+ G+ +D+ S + VS ELE +H KT L
Sbjct: 126 GCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRAKTGAL 185
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G ++GG + +++ER+ +A GL FQ+ DDILDVT +++ GK G D +
Sbjct: 186 FRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGSDARNR 245
Query: 237 KATYPKLMGIENARK 251
K TY + G+E AR+
Sbjct: 246 KHTYVSVCGLEAARR 260
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 174/266 (65%), Gaps = 3/266 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++EA++YSL GGKR+RP+LC+A CE+VGG+ A+ ACA+EMIHT SL+HDDLP MD
Sbjct: 31 RLYEAVKYSLTVGGKRLRPILCMAGCEVVGGNYEEALTPACAIEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND RRG PT F E TAILAGDALL+ AFE ++ + + DR ++ I E+ A G
Sbjct: 91 NDTLRRGHPTTWYKFDEATAILAGDALLNRAFEVLSQWNFDC--DRKIKVIEEISKASGM 148
Query: 143 EGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+V G+ D+D+EG KDV+L EL IH HKT +L+ A+VV G I GGG+ E+ ++KY
Sbjct: 149 LGMVLGQQCDMDAEGRKDVTLEELLFIHRHKTGRLITASVVSGGITGGGSEEEIGTLKKY 208
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
IGL FQ++DD+LDV ++GK G DL K T+ G++ A++ A + + +A
Sbjct: 209 GDSIGLAFQIIDDVLDVIGDQNKIGKNVGSDLEKGKVTFVTFFGVDGAKRKAREEIEKAI 268
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
L F + L LA++I R++
Sbjct: 269 SALELFPAKKNELLKKLAHFIVEREY 294
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 170/254 (66%), Gaps = 4/254 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ ++A V++ALDE + + +P IH+A+RYSL AGGKR+RPVL +A+ E VGGD +
Sbjct: 7 LKARAALVDRALDEFLPPEDTYPPVIHQAIRYSLFAGGKRLRPVLALAAAETVGGDPARV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACALE+IHT SL+HDDLP MDNDDFRRGKPT H+V+GE AILAGDALL+ AF +A
Sbjct: 67 LPAACALELIHTYSLIHDDLPAMDNDDFRRGKPTCHRVYGEAVAILAGDALLTHAFALLA 126
Query: 119 AKS-TEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ +++P +RVV+ I E+ +A G+ GL+ G+++D + V LE IH HKT L
Sbjct: 127 KNAQNQLAPAERVVQVIEEVAAAAGTLGLIGGQVVDTLAADTAVDAATLEYIHRHKTGAL 186
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AV G I+ G ++E + YA +GL FQ+ DDILDV LGK G D +
Sbjct: 187 YRVAVRAGAILAGAKEKQLEALTIYAENLGLAFQIQDDILDVEGDPARLGKPVGSDERNK 246
Query: 237 KATYPKLMGIENAR 250
KATYP L G++ AR
Sbjct: 247 KATYPALFGLDVAR 260
>gi|6016394|sp|O66126.1|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 177/269 (65%), Gaps = 5/269 (1%)
Query: 20 HPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
HPA ++HEA+ YSL AGGKR+RP+L + + + +GG+ +P ALEMIHT SL+HDD
Sbjct: 25 HPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDD 84
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MDNDD+RRGK TNHK F E TAILAGDALL+ AF+ + +T+++ + + I L
Sbjct: 85 LPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCIL--NTQLNAEIKLSLINLLS 142
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
+A GS G+V G+++D+ E K ++LNELE IH+HKT +L+ AA+V II N ++E+
Sbjct: 143 TASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQ 202
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ + +GL+FQ+ DDILDV S + +GKT G DL +DK+TY L+G+E +++ D L
Sbjct: 203 LNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKL 262
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
+ + L + L L YI R
Sbjct: 263 TETYDALKTLQPIN-DNLKTLITYIVERN 290
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 174/257 (67%), Gaps = 10/257 (3%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + + V AL + +LR P + +AM YSL AGGKR+RP+L +A+ + +G D + +
Sbjct: 10 LNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGL 69
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGDALL+ AF+ +A
Sbjct: 70 PVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIA- 128
Query: 120 KSTEISPDRV-----VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
E+ DRV ++ I +L A G EG+VAG+ D+++EGK ++L ELE IH HKT
Sbjct: 129 ---EVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTG 185
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
K+L+ +V G ++GG + + + ++A +GL FQ+ DDILD+ +++GK G D
Sbjct: 186 KMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRD 245
Query: 235 SDKATYPKLMGIENARK 251
+ KATYP L+ + A++
Sbjct: 246 NKKATYPALLSLGGAKE 262
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/252 (47%), Positives = 167/252 (66%), Gaps = 3/252 (1%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVACALEMIHTMSLVH 75
Q + AM+YSL AGGKR+RP+L + C+ +G + + VA +LE +HT SL+H
Sbjct: 24 QFTENKTLQAAMQYSLEAGGKRIRPLLIMLICQSLGKKIDPDVLSVAGSLEFLHTYSLIH 83
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DDLP MDNDD RRGKPTNHKVFG+D A+LAGDALL+ AF +A T++SP + V +AE
Sbjct: 84 DDLPEMDNDDLRRGKPTNHKVFGQDIAVLAGDALLTEAFGWIA--KTKLSPKKRVTLVAE 141
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G+ G+VAG+ DI E ++L EL +H +KT +LLE A G I+GG +
Sbjct: 142 LAKAAGANGMVAGQTSDILGEKTTLTLAELMQVHKNKTGQLLEYACFAGAILGGATPKQE 201
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+ + + + GL FQ+ DDILDVT ++ ELGKTA KD+ +K TYP+L+G+E A++ +
Sbjct: 202 QALVTFGQKFGLAFQIYDDILDVTATTAELGKTANKDVAENKNTYPRLLGLEGAKQALAN 261
Query: 256 LLAQATEELAYF 267
L QA ++L +
Sbjct: 262 TLEQAKDQLEFL 273
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 186/280 (66%), Gaps = 3/280 (1%)
Query: 8 VNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+N +L E+++ L P+ + +M YS+ AGGKR+RP+L IAS E GG + +P A ALE
Sbjct: 16 INHSLIESIEKLSIPSTLKASMLYSIKAGGKRIRPILMIASVEAFGGKKEDVLPAAIALE 75
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
++HT SL+HDDLP MD+D+ RRG+PTNH FGE TAILAGD+LL+LAF+ V +++ ++
Sbjct: 76 LVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLTLAFQ-VISEAENLTA 134
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
++ V I L A G G+VAG+I+D+++E + V+L+ELE IH KT +LL AV G
Sbjct: 135 EQKVTIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIHRLKTGELLIFAVEIGAY 194
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ G +++ +R++ IGL+FQ+ DDILD+ ++LGK G D + K+TYPKL+GI
Sbjct: 195 LAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAVGSDQENKKSTYPKLLGI 254
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
E A + + QA L ++A + L+ YI++R+
Sbjct: 255 EGALQAKAANIKQAEASLNQAQIANST-LHAFIDYISNRE 293
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+LR P + +AM YSL AGGKR+RP+L +A+ + +G D + +PVACA+EMIHT SL+HD
Sbjct: 27 RLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-----VR 131
DLP MDNDD RRGKPTNHKVFGE AILAGDALL+ AF+ +A E+ DRV ++
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIA----EVDDDRVPPSVRLQ 142
Query: 132 AIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGN 191
I +L A G EG+VAG+ D+++EGK ++L ELE IH HKT K+L+ +V G ++GG +
Sbjct: 143 LIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGAD 202
Query: 192 MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+ + ++A +GL FQ+ DDILD+ +++GK G D + KATYP L+ + A++
Sbjct: 203 GRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPALLSLGGAKE 262
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/272 (49%), Positives = 185/272 (68%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H AMRYS+ AGGKR+RPVL +A+CE VGG A+P ACA+EMIHT SL+HDDLP
Sbjct: 29 PVSVHRAMRYSVFAGGKRIRPVLMLAACEAVGGTPDLALPAACAMEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAAKSTEISPDRVVRAIAE 135
MD+DDFRRG+PTNHKVFGE AILAGDALL+ AF AAK+ R++ I E
Sbjct: 89 MDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAKAGHA---RILPVIHE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
+G GS G+V G+++D++SEG KD+ L ++ IH HKT L++A+V G I+GG
Sbjct: 146 IGICAGSRGMVGGQVVDMESEGKKDIDLATVQYIHTHKTGALMKASVKAGAILGGAEGDA 205
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + +Y IGL FQ+ DDILD+ +++++GK AG D KATYP +MG+ ++++ A
Sbjct: 206 LAAMTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVMGLADSKRRAQ 265
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+L+ A E L+ F +A PL +A YI SR+
Sbjct: 266 ELVDLALEALSPFG-EKAEPLREIARYIVSRK 296
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 186/283 (65%), Gaps = 13/283 (4%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+N+ LDE V L++P +I+EAMRYS+LA G KR PV+C+A+CEL G D +A P ACALE
Sbjct: 53 INQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALE 112
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST-EIS 125
M+H SL+HDDLPCMD+D RRG+P+NH V+G D AILAGDAL L F+H+ + + ++
Sbjct: 113 MVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLV 172
Query: 126 PD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
P+ R++R +AE+ AVGS G+ AG+ +D++ N +E + K ++ + + VCG
Sbjct: 173 PESRLLRVVAEIARAVGSRGMAAGQFLDLEG-----GPNSVEFVQEKKFGEMAQCSAVCG 227
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
++ G E++R+R+Y R +G+L+QVVDDIL+ + SK+L T + S +Y ++
Sbjct: 228 GLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILE--EQSKKLDYT-DESKRSKGKSYVEVY 284
Query: 245 GIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
GIE A++ A +L A+A EL FE + PLY Y A R
Sbjct: 285 GIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVDYAADR 327
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 173/264 (65%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ E+M Y+L+AGGKRVRPVL +A+ E+VGG +P AC LEMIHT SL+HDDLP +DN
Sbjct: 28 LSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIHDDLPALDN 87
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG+PTNHKVFGE TA+LAGD LL+ F+ +A+ + +R ++ I E AVG +
Sbjct: 88 DDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLAS-DVPVPLERQIKVIRETAEAVGWQ 146
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D E ++S++++ NIH KT LL A+V G I+GGG E+ ++ YA
Sbjct: 147 GMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEEIRQLSIYAA 206
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILD+ + LGK G DL K+TYP ++G++ A+ + +A
Sbjct: 207 ALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSILGMDGAKIQLKQKIIEAKTA 266
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L FE +A L A YI +R H
Sbjct: 267 LEKFE-EKAEFLLCFADYIETRNH 289
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 198/291 (68%), Gaps = 6/291 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ + + V+ AL+ + L PA +H++MRYS+ AGGKR+RP+L +A+CE VGG+ S A
Sbjct: 7 LKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGGKRIRPILMLAACEAVGGNISQA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP ACA+EMIHT SL+HDDLP MD+DDFRRG PTNHKVFGE AILAGDALL+ AF ++
Sbjct: 67 MPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEAFILLS 126
Query: 119 --AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAK 175
A + + P +V+ I E+ GS G+V G+++D++SEG ++ L ++ IH HKT
Sbjct: 127 NLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQYIHTHKTGA 186
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L++A+V G ++GG + + E + +Y IGL FQ+ DDILD+ +++E+GK AG D
Sbjct: 187 LIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGKDAGSDEAR 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KATYP +MG+ A+ A +L+ A + L+ F+ +A PL +A YI R+
Sbjct: 247 GKATYPAVMGLAEAKIRAAELVDIALDALSAFD-GKADPLREIASYIVKRK 296
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 182/283 (64%), Gaps = 5/283 (1%)
Query: 8 VNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
VN L+E ++ + I+ AMRYSLLAGGKR+RPVL +A C+++GGD +P ACA+
Sbjct: 14 VNNFLEECIKEKDLMEKSIYNAMRYSLLAGGKRLRPVLSLAVCDMLGGDLKEVLPYACAV 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-- 123
EMIHT SL+HDDLP MDNDD+RRGK TNHKVFGE AILAGD LL++AFE + ++
Sbjct: 74 EMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSNC 133
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ + V+A+ + + G G++ G+++DI+SE +VS+ LE +H KT L++A+V+
Sbjct: 134 NNIENKVKAMGYIAKSSGVRGMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVIS 193
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
II + +++ + YA IGL FQ+ DDILDV + +LGK G D + K TY +
Sbjct: 194 AAIICNASNEDIQNLENYAEGIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKKTTYVSI 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E +++ ++ A + L F +AA L LA Y+ R+
Sbjct: 254 YGLEKSKQMLTEITESAIKSLDSFG-GKAAFLKELAEYLVIRE 295
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 186/287 (64%), Gaps = 21/287 (7%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+N+ LD+ V +++P KI+EAMRYS+LA G KR PV+C+A+CEL GG+ +A P ACALE
Sbjct: 32 INQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPTACALE 91
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEIS 125
M+H+ SL+HDDLPCMD+D RRG+P+NHK++G D AILAGDAL L F H+ + + +++
Sbjct: 92 MVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHTPSDLV 151
Query: 126 PD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
P+ R++ IAE+ AVGS G+ AG+ +D++ N +E + K ++ E + VCG
Sbjct: 152 PEPRLLSVIAEIARAVGSTGMAAGQFLDLEG-----GPNSVEFVQEKKFGEMGECSAVCG 206
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDV----TKSSKELGKTAGKDLVSDKATY 240
++ G E++R+R+Y R +G+L+QVVDDIL+ +K ++ K GK +Y
Sbjct: 207 GLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKRKGK-------SY 259
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAA--PLYHLAYYIASR 285
L G+E A + A +L A+A EEL FE + PLY Y A R
Sbjct: 260 VALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADR 306
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+LR P + +AM YSL AGGKR+RP+L +A+ + +G D + +PVACA+EMIHT SL+HD
Sbjct: 27 RLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-----VR 131
DLP MDNDD RRGKPTNHKVFGE AILAGDALL+ AF+ +A EI DRV ++
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMA----EIDDDRVPPPVRLQ 142
Query: 132 AIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGN 191
I +L A G EG+VAG+ D+++EGK ++L ELE IH HKT K+L+ +V G ++GG +
Sbjct: 143 LIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGAD 202
Query: 192 MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+ + ++A +GL FQ+ DDILD+ +++GK G D + KATYP L+ + A++
Sbjct: 203 GRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPVLLSLGGAKE 262
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 174/267 (65%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+L A+ EL G D++ + + A+E+IH SLVHDDLPC
Sbjct: 31 PARLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H +GE TA+L GD+L SLAF+ +A + P + I L A
Sbjct: 91 MDNDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAA 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+DS GK +SL ELE +H+HKT L+ AAV+ G G N + +++
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+CIGL FQVVDDILD S+ LGKTAGKD ++K TY ++GI+ AR+ A +L +
Sbjct: 211 HFAKCIGLAFQVVDDILDAEASTAALGKTAGKDAENNKPTYVSILGIKQARELAHELQRE 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A+ L F A L + +I R+
Sbjct: 271 ASGVLDKFG-PEALRLQQITDFIVQRE 296
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 178/262 (67%), Gaps = 2/262 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
++MRYSL+ GGKR+RPVL +A+ E VGG S +P ACALE+IHT SL+HDDLP MDNDD
Sbjct: 29 QSMRYSLVGGGKRIRPVLALAAAEAVGGQADSILPSACALELIHTYSLIHDDLPAMDNDD 88
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
+RRG+ NHKVFGE AILAGD LL+ AFE + A+ ++ +R +R I E+ A G EG+
Sbjct: 89 YRRGRLANHKVFGEGKAILAGDGLLTYAFELI-ARPLPVNAERQLRVIQEVAQAAGPEGM 147
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+++D+++EGK ++L E+E IH HKT +L + G I+GGG +++ + +YA+ +
Sbjct: 148 VLGQVLDLEAEGKTLTLGEIEQIHQHKTGAMLVVSARMGGILGGGTEAQIQALTRYAQAL 207
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DDILD+ S LGK A DL +K+TYP L+G+ A++ + +A E L+
Sbjct: 208 GLAFQIKDDILDLEGDSATLGKPAQSDLEQEKSTYPSLLGLAGAKEELAVKIKEAHEALS 267
Query: 266 YFEVARAAPLYHLAYYIASRQH 287
F L+ LA YIA R H
Sbjct: 268 VF-TQSVDFLHSLADYIADRMH 288
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 176/276 (63%), Gaps = 10/276 (3%)
Query: 11 ALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHT 70
A DET++ +AM YSL+AGGKR+RPVL +A+ + VG D ++ + CA+EMIHT
Sbjct: 29 AYDETLE--------KAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHT 80
Query: 71 MSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVV 130
SL+HDDLP MDNDD+RRGKPTNHKVFG+ A+LAGDALL+LAFE V + +P+ +V
Sbjct: 81 YSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE-VMLRQEGAAPETLV 139
Query: 131 RAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG 190
++E+ A G G+V G+++D++ EG+ + L L IH+ KT L AA+ G I+ G
Sbjct: 140 TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGA 199
Query: 191 NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
E+ + YA GL FQ+ DDILDVT +GK G D+ ++KATY L +E A+
Sbjct: 200 KEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAK 259
Query: 251 KFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K A D + +A L F RAA L LA ++ R+
Sbjct: 260 KLAEDAVNEAVAALDIFG-ERAAFLRDLALFLLRRK 294
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 180/281 (64%), Gaps = 2/281 (0%)
Query: 8 VNKALDE--TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
V K +DE ++ + + K+ E+M+YS+ AGGKR+RP+L + + +L+ + + +ACA+
Sbjct: 14 VEKYMDELLSINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNKNPFDFIEIACAI 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDND RRGKPTNH VFGE TAILAGD LL+LA E + A ++
Sbjct: 74 EMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAHEIMIAFVSKKL 133
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
+ I + A G G++AG+ +DI+SEGK + ++ ++ IH +KT L+EA++V
Sbjct: 134 TKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTGALIEASIVAAA 193
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
++ + + ++ YA+ IGL FQ+ DDILD+ + ELGK G D ++DKATYPK G
Sbjct: 194 VMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKKIGSDELNDKATYPKYFG 253
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+E ++++A + + A E L FE LA YI R+
Sbjct: 254 LEKSKEYAKNTITNAIESLNVFEPREKTFFVELADYIICRK 294
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 170/272 (62%), Gaps = 6/272 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRY++L GGKRVRP+L A+ ELVG D ACA+E+IH SLVHDD+P
Sbjct: 52 PDRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPA 111
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD--RVVRA--IAEL 136
MDNDD RRGKPT H+ +GE A+L GDAL +LAFE + A E P RV A +A L
Sbjct: 112 MDNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVL 171
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV- 195
A GS G+ G+ +DI+ G +S +LE +H KT +L +V G++ GG ++
Sbjct: 172 ARAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLA 231
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E +++Y R IGL FQVVDDILDVT S LGKTAGKD DK TY L+G+E AR A D
Sbjct: 232 EAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLEGARALATD 291
Query: 256 LLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L AQA L RA L LA +I R H
Sbjct: 292 LHAQAHACLQALG-PRADRLRMLADFIVERLH 322
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 163/251 (64%), Gaps = 5/251 (1%)
Query: 4 KAKRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
K VN+ LD + P +IHEAMRYSL+AGGKR+RP+L +A+ E GG PV
Sbjct: 9 KVPEVNRWLDRLMPPATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGGAPERLYPV 68
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
ACA EM+HT SL+HDDLP MDNDD RRG PT HK F E TAILAGD L++ AF +A
Sbjct: 69 ACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAFRILA--E 126
Query: 122 TEISPDRVVRAIAELGSAVGS-EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++ VR I EL G+ EG++AG+I+D+++E K + L+ IH KT L+ A
Sbjct: 127 MDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHRAKTGALIRGA 186
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VVCG I+ G ++ + Y +GL FQ+ DDILD T ++++LGKT GKD + KATY
Sbjct: 187 VVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPGKDAAAGKATY 246
Query: 241 PKLMGIENARK 251
P L G+E +RK
Sbjct: 247 PALYGLEASRK 257
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 174/268 (64%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ +AM YSL A GKR+RPVL AS + + E +P+A ALEMIH SL+HDDLP
Sbjct: 32 PKELLDAMEYSLFAPGKRIRPVLVFASTQTLNMPEEDVIPLAGALEMIHAFSLIHDDLPS 91
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP-DRVVRAIAELGSA 139
MDNDD RRG+PTNHKVFGE AILAGDALLS AF ++ TE P + ++ I A
Sbjct: 92 MDNDDLRRGRPTNHKVFGEALAILAGDALLSHAFTVLSDLDTEKYPHENIIDVIHHFAKA 151
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+ G+++G++ D+ SE + +SL+EL+N+H HKT L+ AV ++ G ++ +
Sbjct: 152 TGTCGMISGQVWDMQSENRIISLDELQNLHRHKTGALITLAVTSPAVLKGAEPDVMDCLI 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+Y+ IGL FQVVDDILD+ + + LGK G D +K+TYP L+G++ A+K A LL
Sbjct: 212 RYSEAIGLCFQVVDDILDI-EGDESLGKPIGSDQAKNKSTYPALLGLDGAKKEAKRLLEV 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
A L F+ RA PL +A +IA R++
Sbjct: 271 ALASLTSFD-ERADPLRAIARFIAERRN 297
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 176/276 (63%), Gaps = 10/276 (3%)
Query: 11 ALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHT 70
A DET++ +AM YSL+AGGKR+RPVL +A+ + VG D ++ + CA+EMIHT
Sbjct: 29 AYDETLE--------KAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHT 80
Query: 71 MSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVV 130
SL+HDDLP MDNDD+RRGKPTNHKVFG+ A+LAGDALL+LAFE V + +P+ +V
Sbjct: 81 YSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE-VMLRQEGAAPETLV 139
Query: 131 RAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG 190
++E+ A G G+V G+++D++ EG+ + L L IH+ KT L AA+ G I+ G
Sbjct: 140 TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGA 199
Query: 191 NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
E+ + YA GL FQ+ DDILDVT +GK G D+ ++KATY L +E A+
Sbjct: 200 KEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAK 259
Query: 251 KFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K A D + +A L F RAA L LA ++ R+
Sbjct: 260 KLAEDAVDEAVVALDIFG-ERAAFLRDLALFLLGRK 294
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 175/264 (66%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ EAM YSL+AGGKR+RP+L +A+ + VG D + +P ACALEMIHT SL+HDDLP MDN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKV+G+ AILAGDALL+LAF V + ++ ++R + E+ A G+E
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAVSLLRVVDEISRAAGAE 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ +E K +SL+EL +H+ KT L AA+ G I+GG + ++ + YA
Sbjct: 149 GMVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYAD 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+ DDILDV +++++GK G D + K+TY L + A++ A + +A
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELARRTVDEALAA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
LA F + A+ L L Y+ +R+
Sbjct: 269 LAVFG-SEASFLRELVSYLVNRKQ 291
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 164/251 (65%), Gaps = 5/251 (1%)
Query: 4 KAKRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
K VN+ LD+ + P +IHEAMRYSL+AGGKR+RP+L +A+ E+ GG PV
Sbjct: 9 KVPEVNRWLDQLMPPVTTPPPRIHEAMRYSLMAGGKRLRPILVLAAGEVFGGAPERLYPV 68
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
ACA EM+HT SL+HDDLP MDNDD RRG PT HK F E TAILAGD L++ AF +A
Sbjct: 69 ACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAFRILA--E 126
Query: 122 TEISPDRVVRAIAELGSAVGS-EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ ++ VR I EL G+ EG++AG+I+D+++EGK + L IH KT L+ A
Sbjct: 127 MDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFIHRAKTGALIRGA 186
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+VCG I+ ++ + Y +GL FQ+ DDILD T ++++LGKT GKD + KATY
Sbjct: 187 LVCGGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGKTPGKDAAAGKATY 246
Query: 241 PKLMGIENARK 251
P L G+E +RK
Sbjct: 247 PALYGLEASRK 257
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 172/264 (65%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +AM YSL+AGGKR+RPVL +A+ + VGGD + + VACALEMIHT SL+HDDLP MDN
Sbjct: 30 LRQAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKVFG+ AILAGD LL+LAF V + ++S D ++R + E+ A G+E
Sbjct: 90 DDYRRGKLTNHKVFGDGIAILAGDGLLTLAFT-VILRQQDVSADTLLRVVDEISRAAGAE 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ +E +S+ E+ +H+ KT L AA+ G I+GG + ++ + YA
Sbjct: 149 GMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTTYAE 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+ DDILDV +++++GK G D + K+TY L ++ A++ A + A
Sbjct: 209 QFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVSLTSLDEAQELAAQTVKDACAA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L F A A L L Y+ R+
Sbjct: 269 LRDFG-AEADFLRELVSYLVYRKQ 291
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 167/269 (62%), Gaps = 2/269 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + E+M YSL+AGGKR+RP+L +A+ E +GG +A+P A A+E+IHT SL+HDDLP
Sbjct: 33 PAPLRESMMYSLMAGGKRLRPILVLAAAEALGGSPEAAVPAALAVEIIHTYSLIHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRAIAELGS 138
MDNDDFRRGKPTNHKV+GE AILAGDALL+ AF V +A+ I DRVV + EL
Sbjct: 93 MDNDDFRRGKPTNHKVYGEAMAILAGDALLTHAFYSVVQSARKHNIPADRVVDIVEELSR 152
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G+ G+V G+ D+ E L ELE IHLHKT+ L+ ++ G I G ++ +
Sbjct: 153 LSGAPGMVGGQAADMLGEQGVTKLEELEYIHLHKTSDLIVFSLKAGGRIAGATEAQLAAL 212
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
++ CIGL FQ+ DD+LD+ +LGK D+ K TYP +GIE + A +L
Sbjct: 213 ERFGTCIGLAFQIQDDVLDLIGDESKLGKPVQSDVKQQKVTYPYFIGIEASISKAGELTR 272
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A + + + R L LA Y+ R H
Sbjct: 273 EAKQAILAADFPRPERLLELADYLMKRDH 301
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 173/266 (65%), Gaps = 1/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRY++L GGKRVRP+L A+ EL G D + VA ++E+IH SLVHDD+PC
Sbjct: 32 PQRLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAASVELIHAYSLVHDDMPC 91
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GD+L +LAF+ + P + + I L SA
Sbjct: 92 MDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLTEHRLSDGPQQQMAMIRLLASAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
GS G+ G+ +D+DS GK ++L ELEN+H+HKT L+ AAV+ G G + +++ +
Sbjct: 152 GSRGMAGGQAIDLDSVGKSLTLPELENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLDH 211
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA+C+GL FQVVDD+LD + LGKTAGKD +DK TY L+G+ AR+ A +L +A
Sbjct: 212 YAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTLLGVTAAREMANNLHREA 271
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQ 286
E LA F A A L LA +I R+
Sbjct: 272 LESLAEFGDA-AQRLRELADFIVLRK 296
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 175/282 (62%), Gaps = 9/282 (3%)
Query: 12 LDETVQL------RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+DE + L +P IHE+M YSL AGGKR+RP L IA+ E VGG +P A A
Sbjct: 14 IDEAIPLFLPEPDTYPVSIHESMHYSLSAGGKRLRPTLLIAATEAVGGSRKDVLPFAVAA 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTE 123
E +HT +L+HDDLP +DND RRGKPTNHKVFGE AILAGDALL+ AF + A
Sbjct: 74 EFLHTYTLIHDDLPALDNDSLRRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNAFLMEA 133
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
I + ++RA E+ A+ S G++ G+++D++SEGK + + LE IH++KT ++ V
Sbjct: 134 IPHENILRASHEMAQALSSTGVIGGQVVDLESEGKPIEASTLEYIHIYKTGFFFKSCVRV 193
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+G + ++ + ++ IGL FQ++DDILD+ ++GK G D+ +KATYP L
Sbjct: 194 GAILGRADSQQLGAISRFGAHIGLAFQIIDDILDIVGDKAKIGKDVGSDVSKNKATYPAL 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G+E +RK A L+ +A L F+ RA PL +A + R
Sbjct: 254 FGLEESRKKADSLVEEAITCLKDFD-ERANPLRDIALFFVQR 294
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 178/283 (62%), Gaps = 15/283 (5%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMPVACALE 66
+N+ LDE V +++P +I+EAMRYS+LA G KR P++C+A+CEL GG+ +A P ACALE
Sbjct: 54 INQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPTACALE 113
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEIS 125
M+H SL+HDDLPCMD+D RRG P NH VFG D AILAGDAL L F+H+ + + +++
Sbjct: 114 MVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHTPSDLV 173
Query: 126 P-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
P DR++R I E+ AVGS G+ AG+ +D++ N ++ + K ++ E + VCG
Sbjct: 174 PEDRILRVITEIARAVGSTGMAAGQFLDLEG-----GPNAVDFVQEKKYGEMGECSAVCG 228
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
++ G + E++ +RKY R +G+L++VVDDIL+ K+ + + +Y +
Sbjct: 229 ALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDKT-----EGKKKKGKSYVSVY 283
Query: 245 GIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
GIE A K A DL AQA EL E + PLY Y A R
Sbjct: 284 GIEKAVKVAEDLRAQAKRELVGLEKYGDKVMPLYSFLDYAADR 326
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 187/283 (66%), Gaps = 4/283 (1%)
Query: 8 VNKALDE-TVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
VN+ LD VQ P K ++ AMRYSL+AGGKR+RPVL +A C+++GG +P ACA+
Sbjct: 17 VNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDDFRRG+PTNHKV+GE AILAGD LL+LAFE + +
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNG 136
Query: 126 P-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+R +A A + A G G++AG+++D++SEGK V L +H KT L++A VV
Sbjct: 137 DMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSA 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ G + +++++ ++A +GL FQ+ DDILDV SS++LGK G D ++K+TY +
Sbjct: 197 AILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVY 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+E +++ D+ +A + L F +A L LA Y+ R++
Sbjct: 257 GLEKSKEILSDVTKKAVDALEKFG-EKADFLRSLAKYLLEREN 298
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 187/283 (66%), Gaps = 4/283 (1%)
Query: 8 VNKALDE-TVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
VN+ LD VQ P K ++ AMRYSL+AGGKR+RPVL +A C+++GG +P ACA+
Sbjct: 14 VNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDDFRRG+PTNHKV+GE AILAGD LL+LAFE + +
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNG 133
Query: 126 P-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+R +A A + A G G++AG+++D++SEGK V L +H KT L++A VV
Sbjct: 134 DMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSA 193
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ G + +++++ ++A +GL FQ+ DDILDV SS++LGK G D ++K+TY +
Sbjct: 194 AILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVY 253
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+E +++ D+ +A + L F +A L LA Y+ R++
Sbjct: 254 GLEKSKEILSDVTKKAVDALEKFG-EKADFLRSLAKYLLEREN 295
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 174/271 (64%), Gaps = 9/271 (3%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ + AM YS AGGKR+RP+L + S +L GG S +P A A+EMIHT SL+HDDLP
Sbjct: 28 YQKTLFSAMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE----HVAAKSTEISPDRVVRAIAE 135
+DNDD RRGK TNHKVFGE AILAGD LL+ A+E H S + S + +AIA+
Sbjct: 88 ALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKACKAIAD 147
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
G G+V G+++D++SE K++ L L+ IHL+KTA ++ A + G + G + V
Sbjct: 148 ---GAGIYGMVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDTV 204
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ Y R +GL FQ+ DDILD+ KELGK G D+ +DKATYP ++G+E +++ A D
Sbjct: 205 EKLEAYGRYLGLAFQIADDILDIEGDEKELGKNVGSDIENDKATYPHILGMERSKEIARD 264
Query: 256 LLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+ +A E++ FE A L LA Y+ SR
Sbjct: 265 LVVKAKEKIEAFEGAEF--LVGLADYVISRN 293
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 132/270 (48%), Positives = 170/270 (62%), Gaps = 5/270 (1%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGG---DESSAMPVACALEMIHTMSLVHDDL 78
AK EAMRYSLLAGGKRVRP+LCIA+ VGG D+ + +PVACALE IHT SL+HDDL
Sbjct: 30 AKHIEAMRYSLLAGGKRVRPILCIAAARAVGGNTIDDQNILPVACALECIHTYSLIHDDL 89
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE-LG 137
P MDND RRGK TNH ++GE AILAGD LL+ AF+ + S AI+ +
Sbjct: 90 PAMDNDALRRGKATNHVLYGEAGAILAGDGLLTWAFDLLCNPSHGNLDSEKKLAISHCIA 149
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A GS G+V G+ +DI SE L+ IH KT L+ A+VV G I G + + E
Sbjct: 150 HAAGSFGMVGGQALDIASENTRFPFETLQTIHRSKTGALITASVVSGAIAAGADREQSEA 209
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+++Y IGL FQ+VDD+L+ T ++++LGK AG D+ KATYP GIE RK A + +
Sbjct: 210 LKQYGHQIGLAFQIVDDLLNATATTEQLGKAAGSDIELGKATYPAYFGIEETRKRALNAI 269
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L F+ +A PL LA YI +R H
Sbjct: 270 EKAKTCLKDFD-DKAQPLRLLADYIYTRSH 298
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 164/239 (68%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T + + P +HEA+ Y L +GGKR+RP+LC+A V + A+P+ACA+E IHT SLV
Sbjct: 29 TGKAKKPRILHEAIDYCLFSGGKRLRPILCLAGAHAVCRNSDCALPMACAVECIHTYSLV 88
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLP MDNDDFRRGKP+ HK++GE AIL GDALL+LAFE + S V + I
Sbjct: 89 HDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDALLALAFEVASLCSPLGRTYPVSQMIW 148
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
EL GS LVAG++ D+++EGK++ L +L IH KTA L+ ++ G + +
Sbjct: 149 ELARTAGSRALVAGQVADLEAEGKEIGLTQLRYIHCRKTAALITTSLRLGAMAADADKKT 208
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++ + +Y R +GL FQ++DDILDVT++++ LGK+AGKD + KATYP++MG+E +++ A
Sbjct: 209 LDLITRYGRALGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPRIMGLEYSKEAA 267
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 162/249 (65%), Gaps = 1/249 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L P ++ E+M YSL AGGKR+RP+L AS G D S + A A+EM+HT SL+HD
Sbjct: 26 KLNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI-SPDRVVRAIAE 135
DLP MDNDD RRGKPTNHKVFGE AILAGDALL+ +F+ +A E S + + I E
Sbjct: 86 DLPSMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLSLIKE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G+EG+V G+ DI EGK + L +LE IH+HKT KLLE +VV G I+ + +
Sbjct: 146 LSKASGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETI 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+ + K+A +GL FQ+ DDILD+ + + +GK G D DK+TYP L+ + A++ +
Sbjct: 206 QALSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKEALEE 265
Query: 256 LLAQATEEL 264
+ A E+L
Sbjct: 266 HIRSAKEKL 274
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 194/292 (66%), Gaps = 6/292 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ K V+ AL++ + + P +H+AMRYS+ AGGKRVRPVL +A+CE VGG A
Sbjct: 7 LKEKIALVDAALEQYLPKEEERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVGGQIDKA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP ACA+EMIHT SL+HDDLP MD+DDFRRG+PTNHKVFGE AILAGD LL+ AF+ ++
Sbjct: 67 MPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEAFKLMS 126
Query: 119 AK--STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAK 175
+ I P + I E+ + G+ G+V G+++D++SEGK D+ L ++ IH HKT
Sbjct: 127 DPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYIHAHKTGA 186
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L++A+VV G ++GG + ++ +R+Y GL FQ+ DDILD+ +++E+GK AG D
Sbjct: 187 LIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDAGSDEAR 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP +MG+ A++ A ++ +A L A A PL +A YI R++
Sbjct: 247 GKATYPAVMGLAAAKQEAQAMMDEAMLALEPLGAA-AEPLRAIARYIVERKN 297
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 179/286 (62%), Gaps = 4/286 (1%)
Query: 4 KAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
+ + V K L + ++ P A++ E+MRYSL+AGGKR+RP+L +A+ + VG + +
Sbjct: 15 RQQLVEKQLVKELEKEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTDYLTT 74
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
ACALEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ A+LAGDALL+LAFE V +
Sbjct: 75 ACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFE-VIGRQ 133
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
P ++R + E+ +A G G+V G+ +D++SEG +S+ +L +H+ KT L AA+
Sbjct: 134 QHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTGALFRAAL 193
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G I+ G + ++ + YA GL FQ+ DDILDVT +GK G DL ++K+TY
Sbjct: 194 RSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLRNEKSTYV 253
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L +E A++ A + + A L F A L L Y+ R++
Sbjct: 254 TLTSLEEAQRLAKETVDAAVAALDGFG-PEADFLRQLVRYMLERKN 298
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 185/291 (63%), Gaps = 14/291 (4%)
Query: 5 AKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A VN LD V+ ++ AMRYSLLAGGKR+RPVL +A CEL+GGD + MP A
Sbjct: 11 ADLVNAFLDNYVKENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCELLGGDINEVMPFA 70
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE-HVAAKS 121
CA+EM+HT SL+HDDLP MDNDDFRRGK TNHK FGE AILAGD LL+LAFE + + +
Sbjct: 71 CAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTA 130
Query: 122 TEISPDRV--VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
T+ + V V+A++ + + G G++AG+++D +SE K+V+ LE +H KT L++A
Sbjct: 131 TDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLEYMHKCKTGALIKA 190
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VV II + ++ + YA +GL FQ+ DDILDV S+++LGK G D + K T
Sbjct: 191 PVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKLGKKVGSDESNKKTT 250
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAP----LYHLAYYIASRQ 286
Y L G+E +++ +L + TEE A + + P L LA Y+ R+
Sbjct: 251 YVSLYGLEKSKQ----MLRETTEE-AIKNIGKFGPNANFLRELAEYLIVRE 296
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 172/270 (63%), Gaps = 8/270 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRY++L GGKRVRP+LC A+ E+ G + A ALE+IH SLVHDDLPC
Sbjct: 34 PQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAALELIHVYSLVHDDLPC 93
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+LAGD+L SLAF+ +A SP +R + L A
Sbjct: 94 MDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADSPQTQLRMLEHLARAA 153
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV----CGVIIGGGNMIEVE 196
GS G+ G+ +D+++ GK ++L ELE +H+HKT L+ A+V+ CG + +M +
Sbjct: 154 GSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGANCGRALASKDM---D 210
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
R+ +A+ IGL FQVVDD+LD ++ LGKTAGKD K TY +G+E AR A +L
Sbjct: 211 RLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYVSTVGVEAARAMAQEL 270
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+A E LA F RA L LA YI SR+
Sbjct: 271 KREAVESLAPFG-ERARRLRELAEYIVSRE 299
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 179/290 (61%), Gaps = 8/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ + + V+ LD V P IH AMRYSL AGGKR+RP+LCI + V D +
Sbjct: 12 LAQQQRLVDSELDRLVPPESAAPETIHRAMRYSLFAGGKRIRPILCIEAARTVSDDCAGV 71
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
AC+LE+IHT SL+HDDLP +DNDD+RRGK TNHKVFG+ AILAGD+LL+LAF+ +A
Sbjct: 72 AAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTLAFQVLA 131
Query: 119 AKSTEISPD-RVVRAIAELGSAVGS-EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+PD R R IAEL +A G+ G++ G++ D++ EGK LE IH KT L
Sbjct: 132 QLD---APDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRAKTGAL 188
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
L A++ G I G + E + Y + +GL FQ+VDDILDV +SS+ LGKTAGKD
Sbjct: 189 LRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEALGKTAGKDAAQH 248
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K T+P + G+E +R+ A +A LA F RA L+ LA I R+
Sbjct: 249 KITFPAVYGLEPSREMAARECERAHAVLAPFG-ERALRLHELADLIVRRK 297
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 169/267 (63%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ +AM YS+ AGGKR+RP+L IA+ E G M VAC LEMIHT SL+HDDLP
Sbjct: 30 PGRLQDAMLYSIEAGGKRLRPILLIATAEAFGAKVDKTMAVACGLEMIHTYSLIHDDLPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRG PT+H+ F E TAILAGDALL+L+ E + E++ V I EL A
Sbjct: 90 MDNDDFRRGLPTSHRRFDEATAILAGDALLTLSSE-IIVNDQELNDRERVFLIQELSRAS 148
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+ G+V G++ D+ SE K + L ELENIH KT KLL A++ G +G + + + ++K
Sbjct: 149 GASGMVEGQMQDMLSEDKQIPLEELENIHKKKTGKLLNFAIIAGAFLGNASDEKFDEMKK 208
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
+GL+FQ+ DDILDVT ++++GK G D + K+TYP+L+G++ AR + +A
Sbjct: 209 MGEALGLIFQIQDDILDVTGDAEKIGKPVGSDEGNRKSTYPQLLGLDGARTQMESYVDEA 268
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L V L L +Y++SR H
Sbjct: 269 QSALKNAGVNHTL-LSELIHYLSSRDH 294
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 181/265 (68%), Gaps = 3/265 (1%)
Query: 6 KRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
K V++AL+ + P +IH A+RYS+ AGGKR+RP+L +A+ E+ G A+P AC
Sbjct: 10 KDVDEALERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHALPAAC 69
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EM+HT SL+HDDLP +D+DD+RRG+ +NHKVFG+ AILAGD+LL+LAFE +AA++T
Sbjct: 70 AIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLAAEATA 129
Query: 124 -ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+P VVR LG A G G++ G+++D+ SEGK V+ L+ IH HKT L +
Sbjct: 130 YFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALFTCCIK 189
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I+GG ++ E++R+ +A+ IGL FQ+VDDILD+T LGK G D KATYP
Sbjct: 190 SGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQNRQKATYPA 249
Query: 243 LMGIENARKFACDLLAQATEELAYF 267
L G++ A + A DLL+ A +E+ YF
Sbjct: 250 LYGLKQAEEKARDLLSAAEKEMEYF 274
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 185/288 (64%), Gaps = 9/288 (3%)
Query: 6 KRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
RV ALD+++ + PA++H+AMRY++L GGKR+RP+L A+ + +G + + AC
Sbjct: 16 NRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAAC 75
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV-AAKST 122
A+EMIH SLVHDDLP MD+D+ RRG+PT HK + E TAIL GDAL + AF+ + + +
Sbjct: 76 AVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGNL 135
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
S + + I L A GS G+ G+ +D+++ G+++SL ELEN+H+HKT L+ A+V
Sbjct: 136 HASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVN 195
Query: 183 CGVIIGGGNMIEVERVRK---YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
++ +E E+ + YA+C+GL FQ+ DDILDV ++ LGKT GKD DK T
Sbjct: 196 TASLL--APRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPT 253
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L+G+ AR+ A +L A A L F+ ++A PL LA YI R +
Sbjct: 254 YPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGRDY 300
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 172/268 (64%), Gaps = 7/268 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ K +N L++ +++R+P I E+MRY+ L+ GKR+RPVL + S GG+ + +P
Sbjct: 15 LQENKKLINTYLEKYLEIRYPQIIWESMRYTTLSDGKRIRPVLALESARACGGNIENVIP 74
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA----FEH 116
ACA+EMIH SL+HDDLPCMDNDD+RRG+ TNHKV+GE A+LAGDALLS A +H
Sbjct: 75 TACAIEMIHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAFAVLAGDALLSYAPQIIIQH 134
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A + D + + + EL A G+ GL+ G+++DIDSE K++ + IH HKT +L
Sbjct: 135 TPAY---VDRDLLFQVLEELAIAAGALGLIGGQVIDIDSENKEIDIPTFNYIHTHKTGEL 191
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ A+ G ++ ++E + +Y R +G FQ+ DDILD+T + + LGKT GKD ++
Sbjct: 192 FKFAMRSGALLSQATDEQLEILTEYGRLVGYAFQIADDILDITGTKESLGKTPGKDKLAK 251
Query: 237 KATYPKLMGIENARKFACDLLAQATEEL 264
K T+P L G+ +++ L ++A + L
Sbjct: 252 KNTHPSLFGLSQSKEEVEQLCSKAQQIL 279
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 183/288 (63%), Gaps = 9/288 (3%)
Query: 6 KRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
RV ALD+++ + PA++H+AMRY++L GGKR+RP+L A+ + +G + + AC
Sbjct: 6 NRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAAC 65
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST- 122
A+EMIH SLVHDDLP MD+D+ RRG+PT HK + E TAIL GDAL + AF+ +
Sbjct: 66 AVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGNL 125
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
S + + I L A GS G+ G+ +D+++ G+++SL ELEN+H+HKT L+ A+V
Sbjct: 126 HASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVN 185
Query: 183 CGVIIGGGNMIEVERVRK---YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
++ +E E+ + YA+C+GL FQ+ DDILDV ++ LGKT GKD DK T
Sbjct: 186 TASLL--APRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPT 243
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YP L+G+ AR+ A +L A A L F+ ++A PL LA YI R +
Sbjct: 244 YPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGRDY 290
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 173/265 (65%), Gaps = 2/265 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ +M YSL+AGGKR+RP+L +A+ + VG D + + ACALEMIHT SL+HDDLP MD
Sbjct: 33 KLRASMAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMD 92
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+ E TAILAGDALL+LAF V + ++ +R++R + E G A G+
Sbjct: 93 NDDYRRGKLTNHKVYDEGTAILAGDALLTLAFT-VILRQQDVPAERLLRVVDETGRAAGA 151
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+++D+++E + +S+ EL +H+ KT L AA+ CG I+ G + ++ + YA
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRCGAILAGASERQLAALTAYA 211
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DDILDV +++++GK G D + K+TY L ++ A+ A + A +
Sbjct: 212 DHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVESAAD 271
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L F AA L L Y+ R+
Sbjct: 272 ALHIFG-DEAAFLRELVLYLVRRKQ 295
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 187/283 (66%), Gaps = 4/283 (1%)
Query: 8 VNKALDE-TVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
VN+ LD V+ P K ++ AMRYSL+AGGKR+RPVL +A C+++GG +P ACA+
Sbjct: 17 VNEYLDRCIVKNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDDFRRG+PTNHKV+GE AILAGD LL+LAFE + +
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNG 136
Query: 126 P-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+R +A A + A G G++AG+++D++SEGK V L +H KT L++A VV
Sbjct: 137 DMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSA 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ G + +++++ ++A +GL FQ+ DDILDV SS++LGK G D ++K+TY +
Sbjct: 197 AILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVY 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+E +++ D+ +A + L F +A L LA Y+ R++
Sbjct: 257 GLEKSKEILSDVTKKAVDALEKFG-EKADFLRSLAKYLLEREN 298
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 165/267 (61%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + +AMRY++L GGKR+RP+L +A+CE VGG+ +A+ ACA+E+IH SLVHDD+PC
Sbjct: 40 PAGLGDAMRYAVLDGGKRLRPLLVMAACEAVGGNREAALRAACAVELIHAYSLVHDDMPC 99
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H FG+ A+LAGDAL +LAFE + + + R L A
Sbjct: 100 MDNDVLRRGKPTVHVKFGQAQALLAGDALQALAFEFLTPEDGSVDAATQARLCRMLAQAA 159
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G +G+ G+ +D+ S G + +L +H KT LLEA+V+ G G + +R
Sbjct: 160 GFQGMAGGQAIDLASVGMPLDSQQLHEMHRLKTGALLEASVMMGAACGTVAPAAWQALRD 219
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y +GL FQVVDDILDVT S LGKTAGKD DK T+ LMG+E ++ +A LLA+A
Sbjct: 220 YGSAVGLAFQVVDDILDVTADSATLGKTAGKDAAQDKPTFVSLMGLEASKAYAQQLLARA 279
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L +AR L LA + +R H
Sbjct: 280 LAGLDATGLARTEALRALADMLVNRHH 306
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 173/265 (65%), Gaps = 4/265 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ E+M YSL+ GGKR+RPVL +AS E VGG S + A ALE+IHT SL+HDDLP MDN
Sbjct: 27 LDESMYYSLIGGGKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDN 86
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI-SPDRVVRAIAELGSAVGS 142
DD+RRG+ NHK++GE AILAGDALL+ AFE +A S E+ P+R +R I E+ A G
Sbjct: 87 DDYRRGRLANHKIYGEAGAILAGDALLTYAFELLA--SLELGQPERELRIIREVAVASGK 144
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V G++ DI +EGK ++L E+E IH KT +L + G ++GGG+ +++ + YA
Sbjct: 145 DGMVRGQVADITAEGKVLTLPEIEEIHKGKTGAILTVSARLGGVLGGGSEDDIQALTDYA 204
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+ +GL FQ+ DDILDV S+ LGK AG DL K+TY L+G+E A + + +A
Sbjct: 205 QALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEGASEELHSQILKAQA 264
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
+ F + L LA YI R+H
Sbjct: 265 AIKPFG-QKGNFLNELALYIEERKH 288
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 163/245 (66%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L P+ I E+M YSL AGGKR+RP+L A+ +G D + A A+EMIHT SL+HD
Sbjct: 27 RLNAPSIIKESMLYSLEAGGKRIRPLLLFATLHALGHDSKKGLNTAAAIEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI-SPDRVVRAIAE 135
DLP MDNDDFRRGKPTNHKVFGE A+LAGDALL+ +F+ ++ E + D + I E
Sbjct: 87 DLPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQMISETPEEYAAADTKLNLIRE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G+EG+V G+ DI+ EGK + L++LE IH HKT KLL +V+ G ++ G N ++
Sbjct: 147 LSKAAGAEGMVGGQAADIEGEGKQLDLSQLEYIHHHKTGKLLAYSVLAGAMLAGANDEQM 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+ + ++A +GL FQ+ DDILD+ + +GK G D + K+TYP L+ +E A++ D
Sbjct: 207 KDLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDANNQKSTYPSLLSMEGAKEALTD 266
Query: 256 LLAQA 260
+ +A
Sbjct: 267 HIGKA 271
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 174/266 (65%), Gaps = 3/266 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +AMRY LL GGKR+RP LC+A+ E VGG A+ ACALEMIH SL+HDDLP MD
Sbjct: 36 RLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMD 95
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD RRG+ T H F E +AILAGDAL + AF V A + +S + + + L +A G+
Sbjct: 96 NDDLRRGRATAHIAFDESSAILAGDALQAEAFR-VLATAPRLSAEVKLAMVKALANACGA 154
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRKY 201
G+V G+ +D++S + ++L++LEN+H HKT L+EA+V G + GG + ++ + +Y
Sbjct: 155 NGMVGGQAIDLESVARTLTLDQLENMHRHKTGALIEASVHLGALAGGVKDPALLDALARY 214
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
AR +GL FQV DD+LD+ ++ +GKT G D+ K TYP L+G + AR+ LLA+A
Sbjct: 215 ARALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTYPALLGPKGARELLARLLAEAH 274
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
E L + +A L+ +A YI +R H
Sbjct: 275 ESLKGLGI-QADALHAMADYIVARSH 299
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 183/288 (63%), Gaps = 6/288 (2%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ K + +NK L+E + + P I EAM+YSL AGGKR+RP+LCIA CE + G+ +
Sbjct: 7 LKDKQQLINKRLEELLSYVDAPQIIIEAMKYSLFAGGKRIRPILCIAVCEALEGNLEDVL 66
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
+AC++EMIHT SL+HDDLP MDNDD+RRGK TNHKV+G+ AILAGD LL+ AFE +
Sbjct: 67 DIACSIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDAIAILAGDGLLNYAFETLLK 126
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ R V A E+ A G G++ G+++DI + G + N L ++H KT KL+EA
Sbjct: 127 VIKRKNDKRFVDAAFEIAKASGITGMIGGQVIDITNVGNIIDENLLVSMHERKTGKLIEA 186
Query: 180 AVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+ G II N E +E R+Y++ +G+ FQ+VDDILDV K+LGK+ GKD ++K
Sbjct: 187 SCNVGAII--ANRYEYLEITREYSKNLGVAFQIVDDILDVIGDEKKLGKSVGKDAKNNKP 244
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TY L G+E +R+ A + +A ELA ++ L L Y+ +R+
Sbjct: 245 TYVTLYGLEKSRELAKEFSLKAV-ELAN-KIDNTGFLKDLTKYLLNRE 290
>gi|403384095|ref|ZP_10926152.1| geranyltranstransferase [Kurthia sp. JC30]
Length = 293
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 176/284 (61%), Gaps = 18/284 (6%)
Query: 14 ETVQLR------HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
ETV L+ PA + EAM YSL AGGKRVRP+ +A E +G D+ + + A+EM
Sbjct: 16 ETVMLQLVDNITAPAILKEAMAYSLKAGGKRVRPLFVLAVLEHLGADKKAGYTIGSAVEM 75
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHT SL+HDDLP MDNDD+RRGK TNHKV+GE A LAGDAL +L F V A+ IS +
Sbjct: 76 IHTYSLIHDDLPSMDNDDYRRGKLTNHKVYGEAYATLAGDALNTLPF-GVIARMDGISAE 134
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
+ V I L A G+EG+V G+I+DID E + ++L ELE++H++KT +L ++ G ++
Sbjct: 135 QKVTLIDLLSEAAGAEGMVGGQILDIDGETRQLTLEELEHVHVNKTGAILRFSIEAGAVL 194
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ R+YA IGL FQ+ DDILD+ +S++LGKTAGKD+ SDK+TYP L+ ++
Sbjct: 195 ADADQATRNIFREYAYHIGLAFQIKDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLD 254
Query: 248 NARKFACDLLAQATEELAYFEVARAAP-----LYHLAYYIASRQ 286
A++ AT A R P L LA YI R
Sbjct: 255 GAKE------KLATHYEAALAALRQLPSDSTLLEELATYIVKRN 292
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 172/264 (65%), Gaps = 5/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+M YSL AGGKR+RPVL +A+ VGGD +P CALE+IHT SL+HDDLP MDNDD
Sbjct: 29 ESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDD 88
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
+RRG+ NHKVFGE AILAGDALL+ AFE +A + + P R +RAI E+ A G EG+
Sbjct: 89 YRRGRLANHKVFGEGQAILAGDALLTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGM 148
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+++D+++E K ++L ELE +H KT +L A G I+ GG ++E + YA+ I
Sbjct: 149 VGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAI 208
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DDILD+ S+ LGK DL K+TYP LMG+ A+ +L + E A
Sbjct: 209 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAK---LELKIKTDEAHA 265
Query: 266 YFEV--ARAAPLYHLAYYIASRQH 287
V RA L+ LA YIA R++
Sbjct: 266 ALAVLGERAGFLHELADYIAQRKY 289
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/222 (60%), Positives = 176/222 (79%), Gaps = 4/222 (1%)
Query: 70 TMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDR 128
T SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+ S+ ++P+R
Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60
Query: 129 VVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLLEAAVVCGV 185
++RA+ EL A+G+ GLVAG+++D+ SE + V L LE IHLHKTA LLEAA V GV
Sbjct: 61 MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I+GGG E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++ K TYP+L+G
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 180
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+E +++ A L +A E+L F+ ++AAPL LA +IA R +
Sbjct: 181 LERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASHIAFRHN 222
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 178/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R+ +ALD + + HPA++HEAMRYS L GGKRVRPVL + + +G ACA
Sbjct: 16 RLEQALDRWIPAETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGVAPERLDGPACA 75
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SL+HDDLP MDNDD RRGKPT HK F E AILAGDA+ +LAF+ ++ +
Sbjct: 76 VELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALAFQILSMDPDML 135
Query: 125 -SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
P R +R + L A GS G+ G+ +D+ S GK + + +LE++H+HKT L+ A+V+
Sbjct: 136 DDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHKTGALIRASVLL 195
Query: 184 GVIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + + +E + ++A+C+GL FQ+ DDILDV + LGKT G D +K TYP
Sbjct: 196 GALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLGKTQGADQALNKPTYPA 255
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E +R+ A +L+ QA L F A A L +A YI R H
Sbjct: 256 LIGLEESRQAARELVDQALGALEGFG-AEADLLRWIARYIVERIH 299
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 171/265 (64%), Gaps = 8/265 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRYS+ AGGKR+RP L A+ ++ GG ALEM+HT SL+HDDLPC
Sbjct: 37 PCRLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPC 96
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
+DNDD+RRGK T+HK FGE TA++AGDAL AFE + +AI L +
Sbjct: 97 VDNDDYRRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGN-------AKAIELLAHLL 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+ G++ GE+ DI+ EGK V L ++ IH HKTA L+EA+++ G ++ + ++E +R
Sbjct: 150 GTYGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEIIRN 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y R IGL FQ+VDDILD+ +++ELGK AG D+ KATYP ++G+E +R+ A +L ++
Sbjct: 210 YGRSIGLAFQIVDDILDIVSTTEELGKDAGSDIEKGKATYPSIVGLEKSRERARELYEES 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASR 285
+ L + L +A YI +R
Sbjct: 270 IKALDGL-TCDTSILRSIAAYIITR 293
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 164/240 (68%), Gaps = 2/240 (0%)
Query: 13 DETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASC-ELVGGDESSAMPVACALEMIHTM 71
++ + L P + E+M YSL AGGKR+RP+L +A EL G + A+ VA A+EMIHT
Sbjct: 20 EQILSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHELSGQEHPDALKVAAAIEMIHTY 79
Query: 72 SLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVR 131
SL+HDDLP MDNDD RRG PTNHKVFGE AILAGDALL+ +F + A+ +S D VR
Sbjct: 80 SLIHDDLPSMDNDDLRRGMPTNHKVFGEAVAILAGDALLTYSF-GIVARLQHVSSDDKVR 138
Query: 132 AIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGN 191
+ + + G+EG+V G+++DI+ E K ++L ELE +H KT LL +++ G I+ +
Sbjct: 139 LMDLMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQVHRLKTGALLTYSILAGGILAQAS 198
Query: 192 MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
E+ + ++ IGL FQ+ DDILDVT +S+ELGKTAGKD S+K+TYP L+ + A++
Sbjct: 199 NEEILALSRFGEHIGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPGLLTLPKAKE 258
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 160/242 (66%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++EAM YSL+A GKR+RP L +A+ + G + +P A ALEMIH SL+HDDLPCMD
Sbjct: 28 RLYEAMNYSLMADGKRLRPALLMATAQTFGVERQRVLPAAAALEMIHCYSLIHDDLPCMD 87
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
+D RRG+PTNH VFGE A+LAGD LL+ AF +A E+ +R +R I L S G+
Sbjct: 88 DDSLRRGQPTNHVVFGEAIALLAGDGLLTEAFALLARPIPEVPAERQLRMIQILASRAGA 147
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V G+ +D++ G +L +++ IHLHKTA+L++AAV G + + E + Y
Sbjct: 148 DGMVGGQAVDVERTGGQGTLTDVQFIHLHKTARLIQAAVEIGSLFPDLDEKAQEALSTYG 207
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQ+VDD+LDV S+ ELGKTAGKD K TYP+ +GIE R+ A + +A+ E
Sbjct: 208 EALGLAFQMVDDVLDVVGSTSELGKTAGKDEAEGKLTYPRFIGIEETRRLAEETIARGQE 267
Query: 263 EL 264
L
Sbjct: 268 AL 269
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 174/269 (64%), Gaps = 2/269 (0%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ I EAM YSL AGGKR+RP+L + + +L G +P + A+EMIHT SL+HDDLP
Sbjct: 28 YQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE-HVAAKSTEISPDRVVRAIAELGS 138
+DNDD RRGKPTNH VFGE AILAGDALL+ A+E + A P+ +RA E+
Sbjct: 88 ALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNATFKHPRPELSLRAAYEISR 147
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G++ G+++D++SE K ++ ++L+ IH++KTA ++ +V G I+ G + +E +
Sbjct: 148 GAGIYGMIGGQVVDVESEDKKINKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESL 207
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
KYA IGL FQ+VDDILD+ K LGK G DL +DK+TYP L+GI ++K +L+
Sbjct: 208 TKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGISESKKIVENLIE 267
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L F+ + A + LA +I RQ+
Sbjct: 268 EAKISLEVFD-SDAEFMNALADFIRDRQN 295
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 171/265 (64%), Gaps = 3/265 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
IHEAM YS+ AGGKR+RP+LC+ + + DES + +ACA+EMIHT SL+HDDLP +DN
Sbjct: 34 IHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDN 93
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD RRGKPTNH+V+GE AILAGDALL+ AFE + ++PD V+R IAE+ S+ G+
Sbjct: 94 DDLRRGKPTNHRVYGEAMAILAGDALLNRAFEVLC--QLPLAPDLVIRVIAEIASSSGTA 151
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G++ G+++DI SEGK + + + IH +KT +++ + +V I ++E +Y
Sbjct: 152 GMIGGQVVDIQSEGKSIDMPTMRYIHENKTGRIIRSCLVSSAIACQATAEQIELFDRYGY 211
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IGL FQ+ DDILD+ +GK G DL + K+T+P L+G+ ARK +++ +A
Sbjct: 212 NIGLAFQIADDILDIEGDEATMGKPVGSDLQNRKSTWPALVGMNGARKAMQEMIDEANRA 271
Query: 264 LAYFEVARA-APLYHLAYYIASRQH 287
L + A L LA +I R++
Sbjct: 272 LDPLGDSPAVTALRDLARFIIERKN 296
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 182/289 (62%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T + ++ ALD + + P IH+AMRYS+ AGGKR+RPVLC+A+ E GG A
Sbjct: 10 ITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGLAVDA 69
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ACA+EM+HT SL+HDDLP MDNDD RRGKPT+HK FGE AILAGDALL+ AF V
Sbjct: 70 LVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEAF-AVI 128
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A+ + V + EL + GS L+ G+I+D++ E K +S E+ ++ KTA LL
Sbjct: 129 AQVDDTERYTVRDYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVYEGKTAALLT 188
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+ G + ++E + + +GL FQV+DDILD+T S+++LGKTAGKD+ S K+
Sbjct: 189 TALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGKDVNSQKS 248
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
T P L+G++ AR A A + L F R A L LA Y+ +R++
Sbjct: 249 TCPALIGLDGARSEAKCRTQAALDALMIFPEERRARLVELANYLLNREY 297
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 171/267 (64%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++H+AMRYS+L GGKRVRP+L A+ EL G D++ A A+E+IH SLVHDDLPC
Sbjct: 31 PARLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H + E TA+L GD+L SLAF+ + + P + + L A
Sbjct: 91 MDNDTLRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAA 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+DS GK +SL ELE +H+HKT L+ AAV+ G G + + + +
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGNRLDETQFKLLD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+C+GL FQV+DDILD ++ LGKTAGKD ++K TY ++GI+ AR+ A +L +
Sbjct: 211 HFAKCMGLAFQVIDDILDTEATTAALGKTAGKDAENNKPTYVSILGIKQARELAHELRQE 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
AT L F + A L + +I R+
Sbjct: 271 ATGVLNQFG-SEALRLQQVTDFIVQRE 296
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 171/269 (63%), Gaps = 2/269 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
R P+ + +M YSL+AGGKR+RPVLC+A EL GG + + ACA+E IHT SL+HDDL
Sbjct: 29 RSPSPLVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDL 88
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MD+DD RRGKP+NHK F E TAILAGD LL+ AF A S E+ P+R+++A+ L +
Sbjct: 89 PAMDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAF--TLASSLELRPERILKAVFHLST 146
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G G+V G+++D+ GK SL +L +H KT L+E + V G ++GGG+ E +
Sbjct: 147 AAGPRGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKA 206
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+Y R IGL FQV DDILDV LGK G D+ K+TYP L+GI+ +R A +
Sbjct: 207 SEYGRAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQSRVLARQSVD 266
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
QA LA F RA L +A YI R H
Sbjct: 267 QALAALAGFSHPRADFLRAVALYILDRTH 295
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 33/297 (11%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVG-------------GDESSAMPVACALEM 67
P IH AMR+S AGGKR+RP+LC+ + ++V G +A ALEM
Sbjct: 31 PYSIHRAMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEM 90
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
+HT SL+HDDLP +DNDD RRG+PT H VFGE TAILAGDAL +LAF+ +A S P+
Sbjct: 91 LHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIA--SLPAPPE 148
Query: 128 RVV---RAIA-ELGSAVG---------SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
VV R I+ +G+ +G + G++ G+++DI+SEG + + +E IH KT
Sbjct: 149 AVVAILRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTG 208
Query: 175 KLLEAAVVCGVIIG----GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
L+ ++V G I G G ER+R + GL FQ+VDD+LD+T+SS+ELGKTAG
Sbjct: 209 ALITVSIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQSSEELGKTAG 268
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KD +DKAT+P + GIE ++ A +L+A A L F A A PL LA Y+ R H
Sbjct: 269 KDTATDKATWPAVFGIEQSKHDAAELIADAFAALEPFGDA-ATPLKSLAQYLVERTH 324
>gi|333370560|ref|ZP_08462555.1| geranyltranstransferase [Desmospora sp. 8437]
gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 187/289 (64%), Gaps = 4/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ KAK V L E ++ P + EAM YSLLAGGKR+RPVL +A+ E +GGDE A
Sbjct: 8 LKEKAKSVEARLKEYMERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEALGGDEEKA 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+EMIHT SL+HDDLP MD+DDFRRG PTNHK++GE AILAGDALL+ AF+ +A
Sbjct: 68 LPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRAFDVMA 127
Query: 119 --AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A E+ + I E G+EG+V G++ DI EG++VSL EL++IH KT L
Sbjct: 128 EGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIHRSKTGDL 187
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ +V G ++GG E++ + YA +GL FQ+ DD+LDV ++LGK G D V +
Sbjct: 188 ITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPVGSDEVKN 247
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K+TYP L+G++++R+ L+ +A + + E R A L +A Y+ R
Sbjct: 248 KSTYPSLLGLDSSRERIRSLVEEAKQLITAQERIRPARLLAIADYLTVR 296
>gi|388522881|gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/143 (74%), Positives = 121/143 (84%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA RVNKALD+ V LR P K+HEAMRYSLLAGGKRVRPVLC+A+ ELVGG E AMP
Sbjct: 85 MIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAARELVGGTEPMAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 145 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 204
Query: 121 STEISPDRVVRAIAELGSAVGSE 143
+ ++SP R+VRAI EL ++GSE
Sbjct: 205 TVDVSPARIVRAIGELAKSIGSE 227
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDDLPCM 81
++ E+MRYS+ AGGKR+RP+L ++ L + S A+ VA A+E++HT SL+HDDLP M
Sbjct: 27 QLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIHDDLPAM 86
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD RRGKPTNHKVFGE AILAGD LL+LAF+ + E++ D+ V + L G
Sbjct: 87 DNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLG--QAELADDKKVACLTLLAQTAG 144
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
+ G+VAG+ DI++EGK +SL +L+ IH KT +L+ +V+ G IIGG + E ++ +
Sbjct: 145 TLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQAQLDSF 204
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
AR +GL FQ+ DD+LDV +++ELGKTA +D V K+TYP+L+GI+ A+
Sbjct: 205 ARKLGLAFQIKDDLLDVLATTEELGKTAHRDSVLQKSTYPQLLGIQKAK 253
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 170/268 (63%), Gaps = 7/268 (2%)
Query: 27 AMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDF 86
AM +SL+AGGKR+RP+LC+A+CE A+P ACALEMIHT SLVHDDLP MDNDD
Sbjct: 49 AMGHSLMAGGKRLRPILCLAACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDL 108
Query: 87 RRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST--EISPDRVVR--AIAELGSAVGS 142
RRG PT H+ FGE TAILAGD LL+ AF+ ++ ++ PD VR +A + A G
Sbjct: 109 RRGIPTCHRAFGESTAILAGDGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGI 168
Query: 143 EGLVAGEIMDIDSEGKDVSLNELE---NIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+V G+++D+ + D ++ LE IH KT ++ A+VV G + G + +E +
Sbjct: 169 NGMVEGQMLDMLLQNADETVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLA 228
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA IGL FQ+VDDILDV +GKTAG D+ + K T+P MG+E +RK+A +++ +
Sbjct: 229 VYAEKIGLAFQIVDDILDVEGDPTVMGKTAGSDVDNRKMTFPSFMGLEASRKYAQEIINE 288
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
A + L F+ + PL +A YI R+
Sbjct: 289 AVKALDLFDEKKTLPLKAIAAYILQRKR 316
>gi|393200428|ref|YP_006462270.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 175/270 (64%), Gaps = 2/270 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
++ PA + E+M YSL AGGKR+RP+ +A CE+ ++ V A+EMIHT SL+HDD
Sbjct: 27 IKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MD+D+ RRGKPTNH V+GE A LAGDAL +LAF V A+ +S ++ + + L
Sbjct: 87 LPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAF-GVIARLNNLSAEKRIELVNLLS 145
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G+EG+V G+++D+D E + ++L ELE +H++KT LL ++ G ++ ++ + E
Sbjct: 146 VAAGTEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREA 205
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +YA IGL FQ+ DDILD+ +S++LGKTAGKD+ SDK+TYP L+ +E A++ +
Sbjct: 206 LVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHY 265
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
A E L ++ L A YI R +
Sbjct: 266 ELAIEALQKIDI-DTTLLRQFAQYIVRRSN 294
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 171/267 (64%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P K+ EAM YSL AGGKR+RP+L A+ +G D + A ALEMIHT SL+HDDLP
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDD RRGKPTNHKVFGE TAILAGD LL+ +FE V A + ++S ++++R ++ L +
Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFE-VLAGTPDVSAEKLIRLVSLLAKSA 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G EG+V G+ D++ E + +S+ ELE IH +KT +LL +V+ I+ ++ + +
Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA IGL FQ+ DDILDV S +++GK G D K+TYP L+ +E A++ + L +
Sbjct: 210 YAFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLTLEGAKEKLRNHLQKG 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
LA ++ L +A IASR H
Sbjct: 270 KSALAASDLDNGL-LVEIADMIASRDH 295
>gi|406665282|ref|ZP_11073056.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
gi|405387208|gb|EKB46633.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
Length = 294
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 175/270 (64%), Gaps = 2/270 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
++ PA + E+M YSL AGGKR+RP+ +A CE+ ++ V A+EMIHT SL+HDD
Sbjct: 27 IKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MD+D+ RRGKPTNH V+GE A LAGDAL +LAF V A+ +S ++ + + L
Sbjct: 87 LPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAF-GVIARLNNLSAEKRIELVNLLS 145
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G+EG+V G+++D+D E + ++L ELE +H++KT LL ++ G ++ ++ + E
Sbjct: 146 VAAGAEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREA 205
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +YA IGL FQ+ DDILD+ +S++LGKTAGKD+ SDK+TYP L+ +E A++ +
Sbjct: 206 LVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHY 265
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
A E L ++ L A YI R +
Sbjct: 266 ELAIEALQKIDI-DTTLLRQFAQYIVRRSN 294
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 180/293 (61%), Gaps = 7/293 (2%)
Query: 1 MTSKAKRVNKALDE-TVQLRHPAKIH-EAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ K V +A+D ++ P K H EAMRYSL AGGKR+RP+LC+A+ + + E +
Sbjct: 7 LEQKRSLVEEAMDRFMLEESGPFKKHIEAMRYSLFAGGKRIRPILCLAAADSICAQERTQ 66
Query: 59 ---MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+PVACALE IHT SL+HDDLP MD+D RRGK TNH ++GE AILAGD LLS AF+
Sbjct: 67 ENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLLSWAFD 126
Query: 116 HVAAKST-EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
+A + ++ ++ + + A GS G+V G+ +DI SE K++ + L IH KT
Sbjct: 127 LIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLATIHRSKTG 186
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
L+ +++ G I G N ++ + +Y IGL FQ++DD+LD T +++ELGKTAG D
Sbjct: 187 ALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKTAGSDAE 246
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP GI+ R+ A + A + L F+ RA PL LA YI SR +
Sbjct: 247 HGKATYPLFFGIDKTREKAKAAVDNAIKALTLFD-HRADPLRGLANYIYSRTN 298
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 180/290 (62%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
TS ++N+ LDE ++++ P +I+EAMRYS LA G KR PV+CI++CEL GG +A
Sbjct: 54 WTSLMTQINQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAF 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+ RRG+P+NH ++G D AILAGDAL L F+H+ +
Sbjct: 114 PTACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVS 173
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +++ P+ RV+R IAE+ VGS G+ AG+ +D+ V L I K ++
Sbjct: 174 HTPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFGEMA 228
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E + VCG ++ G E+ER+R+Y R +G+L+ +VDDIL+ + L KD +
Sbjct: 229 ECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRENSG 283
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y ++ G+E A + A +L A+A EEL FE + PLY Y R
Sbjct: 284 KSYVEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDR 333
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 171/269 (63%), Gaps = 4/269 (1%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P IH+AM YSL AGGKR+RPVL +A+ E G +P A +E +HT SL+HDDLP
Sbjct: 28 YPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELG 137
MDNDDFRRGKPTNHKVFGE AILAGDALL+ AFE + AK+ E I +RVVR I EL
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQELA 146
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A GSEGL+AG+++D+ S L IHL+KTA+L+ +++ G I+ G E++
Sbjct: 147 VASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKA 206
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE +K A + +
Sbjct: 207 LDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEI 266
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
A L + +++ LA +I R+
Sbjct: 267 NAAKNVLKPYG-EKSSFFIKLAEFILKRE 294
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 183/290 (63%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
TS K +++ LDE + +++P +I+EAMRYS+LA G KR PV+C+A+CE+ GG+ +A
Sbjct: 44 WTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACEIFGGNRLAAF 103
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H+ SL+HDDLPCMD+D RRG+P+NH VFG D AILAGDAL L F H+ +
Sbjct: 104 PTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFPLGFRHIVS 163
Query: 120 KS-TEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ T++ P R++R IAE+ AVGS G+ AG+ +D++ N ++ + K ++
Sbjct: 164 HTPTDLVPHTRLLRVIAEIARAVGSTGMAAGQFLDLEG-----GPNAVDLVQEKKFGEMG 218
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+ + VCG ++ G + E+E +RKY R +G+L++VVDDI + E K+ S
Sbjct: 219 QCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDIRETKLQPDEKDKSK-----SKG 273
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y + G+E A + A DL +QA +EL E + PLY Y A R
Sbjct: 274 KSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLYSFVDYAADR 323
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKR+RP+L A+ LVG VACA+E+IH SLVHDDLPC
Sbjct: 32 PARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPC 91
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H + + TA+L GD+L +LAF+ ++ P + I +L A
Sbjct: 92 MDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ + GK +S ELE +H+HKT L+ A+V+ G G + +ER+
Sbjct: 152 GSRGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLD 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
Y + +GLLFQVVDDILD + LGKTAGKD ++K TY L+G+ AR A LLA
Sbjct: 212 HYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNKPTYVTLLGMTEARALAESLLAD 271
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A E L F +AA L LA +I R+
Sbjct: 272 AREALTPFG-PQAARLDELATFIVHRR 297
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 187/289 (64%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ + +V+KALD + P +H+AMRYS A GKR+RP+L +A+CE VGG
Sbjct: 7 LKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAGKRIRPILMMAACEAVGGTVDKV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP ACA+EMIHT SL+HDDLP MD+DDFRRG+PT HKV+G+ AILAGDALL+ AF ++
Sbjct: 67 MPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLTEAFILLS 126
Query: 119 --AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ +S + R A++ GS G+V G+++D+DSEGK++ L LE IH KT L
Sbjct: 127 RLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIHTRKTGAL 186
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ A+V G ++GG + +V+ + +YA+ GL FQV DDILD+ + LGK G D
Sbjct: 187 ILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDVGSDQERG 246
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
KATYP L+G++ AR A +L A E L+ F+ RA PL +A+YI R
Sbjct: 247 KATYPALLGLDAARDRAKELRDVALESLSGFD-ERAEPLRSIAHYIVDR 294
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 166/253 (65%), Gaps = 4/253 (1%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L P+ I E+M YSL AGGKR+RP+L A+ G D + A A+EMIHT SL+HD
Sbjct: 26 RLEAPSIIKESMLYSLEAGGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI-SPDRVVRAIAE 135
DLP MDNDDFRRGKPTNHKVFGE A+LAGDALL+ +F+ + E + D ++ I E
Sbjct: 86 DLPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQLICETPEEYAAADIKLKLIRE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G+EG+V G++ DI+ EGK + L +LE IH HKT KLL +V+ G I+ N+ ++
Sbjct: 146 LSKAAGAEGMVGGQVADIEGEGKQLHLTQLEYIHHHKTGKLLAYSVLAGAILARANVEQI 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+ + ++A +GL FQ+ DDILD+ + +GK G D + K+TYP ++ +E A++ +
Sbjct: 206 KVLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDTNNHKSTYPSILSMEGAKEALTE 265
Query: 256 LLAQATEELAYFE 268
+ +A +AY +
Sbjct: 266 HIGKA---MAYLK 275
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 182/283 (64%), Gaps = 14/283 (4%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAG-GKRVRPVLCIASCELVGGDESSAMPVACALE 66
+N+ LD+ + +++P +I+EAMRYS+LA KR PV+CIA+CEL GG+ +A P ACALE
Sbjct: 25 INQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPTACALE 84
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEIS 125
M+H SL+HDDLPCMD+ RRG+P+NH V+G D AILAGDAL L F H+ + + +++
Sbjct: 85 MVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNTPSDLV 144
Query: 126 PD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
P+ R++R IAE+ AVGS G+ AG+ +D++ SLN E + K ++ E + VCG
Sbjct: 145 PEPRLLRVIAEIARAVGSTGMAAGQFLDLEG-----SLNSAEFVQEKKYGEMGECSAVCG 199
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
++ G E++R+R+Y R +G+L++V+DD+L+ +K + K ++ +Y L
Sbjct: 200 GLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLE----AKSMSKEDEENEKKKAKSYVSLY 255
Query: 245 GIENARKFACDLLAQATEELAYFEV--ARAAPLYHLAYYIASR 285
G+E A + A +L +A +EL FE PLY+ Y A R
Sbjct: 256 GVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADR 298
>gi|333985123|ref|YP_004514333.1| geranyltranstransferase [Methylomonas methanica MC09]
gi|333809164|gb|AEG01834.1| Geranyltranstransferase [Methylomonas methanica MC09]
Length = 297
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 179/292 (61%), Gaps = 7/292 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T+ RV +ALD + + P +H+AMRY++L GGKR RP+L A+ + +G +E
Sbjct: 8 LTACQNRVERALDARLPGENILPQTLHQAMRYTVLDGGKRTRPLLVYATGQALGLNEDVL 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
ACA+E IH SL+HDDLP MDNDD RRGKPT HK F E TAILAGDAL +LAFE V
Sbjct: 68 DGPACAVEFIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEATAILAGDALQALAFE-VL 126
Query: 119 AKSTEISPDRVVR--AIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A I D R I L A GS+G+V G+ +D+ S G ++L ELEN+H+HKT L
Sbjct: 127 ANDPSILVDAGARLKMIGNLTKASGSQGMVGGQAIDLASVGTQLNLPELENMHIHKTGAL 186
Query: 177 LEAAVVCGVIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+ A+V + + + + YA+CIGL FQV DDILDV + LGKT GKD+ +
Sbjct: 187 IRASVNMAALSKPDLDPAVAKNLDHYAKCIGLSFQVKDDILDVESDTATLGKTQGKDVDN 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
DK TYP L+G+ A++ A +L QA LA F + A L L+ YI R H
Sbjct: 247 DKPTYPALLGMAGAKEKARELHEQAVASLAGFG-SEADLLRELSLYIIERTH 297
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 167/268 (62%), Gaps = 2/268 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++ E+M YSL+AGGKR+RP+ + +CE + G +A PVACA+EMIHT SLVHDDLP
Sbjct: 36 PAELKESMLYSLMAGGKRLRPLCVVIACESLNGPLEAADPVACAIEMIHTYSLVHDDLPA 95
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELGS 138
MDNDD+RRGKPTNHKVFGE AILAGDALL+ AF VA A+ IS + + EL
Sbjct: 96 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQCARRHGISAEIALTITEELSV 155
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G+ D+ E +L++LE IHLHKT+ L+ A+ G + G N ++ +
Sbjct: 156 YAGMRGMVGGQTADMLGEQGLTTLDQLEYIHLHKTSDLIVFALRAGAHLAGANEAQLNAL 215
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
++ +GL FQ+ DDILD+T LGK G D S K TYP +G+E +++ L
Sbjct: 216 TEFGTKLGLAFQIQDDILDITGEEGLLGKPKGSDEKSGKVTYPYFIGLEASKQEVVRLTE 275
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQ 286
+A + + A LY LA Y+ RQ
Sbjct: 276 EAKQAVREAGFPYPARLYELADYLLERQ 303
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 170/285 (59%), Gaps = 4/285 (1%)
Query: 5 AKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
+ R++ +L Q+ P + AM YSL+AGGKR+RP+L +A+ E +GG +AMPVACA
Sbjct: 20 STRLSSSLPAAWQV--PETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGSRDAAMPVACA 77
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKST 122
+EM+HT SL+HDDLP +DNDDFRRGKPTNHKVFGE AILAGD LL+ AF V A++
Sbjct: 78 VEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTHAFYSVVQASRKQ 137
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ + + + EL G G+V G++ D+ E L++L IH HKT L+ +V
Sbjct: 138 GVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHEHKTGDLIVFSVR 197
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G I GN ++E + +Y R +G FQ+ DDILD+ +LGK D++ K TYP
Sbjct: 198 AGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLGKKTQSDVIQQKVTYPY 257
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+GIE +R L ++A + L + L +A + R H
Sbjct: 258 FIGIEASRAEVERLTSEAKQALQNGAIPNPQRLLEIADLLLRRDH 302
>gi|350552260|ref|ZP_08921465.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
gi|349794913|gb|EGZ48721.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
Length = 294
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 183/291 (62%), Gaps = 15/291 (5%)
Query: 6 KRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+R+ LD +Q HPA +H+AMRYS + GGKR+RP+L A+ + +G S AC
Sbjct: 10 QRIETVLDHWLQPPTTHPASLHQAMRYSAMDGGKRIRPILVYATAKALGVPLSCVDGPAC 69
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E+IH SL+HDDLP MDNDD RRG+PT HK F E TAILAGDA+ +LAF+ + E
Sbjct: 70 AVELIHVYSLIHDDLPAMDNDDLRRGRPTCHKAFDEATAILAGDAMQALAFQ-ILVTDPE 128
Query: 124 ISPDRVV--RAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
++ D V R + L A GS G+ G+ +D+ S G+ + L +LE++H+HKT L+ A+V
Sbjct: 129 MTEDPKVRLRMMEILARASGSRGMAGGQAIDLASVGQQIDLVQLEDMHIHKTGALIRASV 188
Query: 182 VCGVIIGGGNMIEVERVR-----KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ G + +++E++ VR +YA+CIGL FQ+ DDILDV ++ LGK G D+ +
Sbjct: 189 LLGAL----SLVEIDEVRLEKLDRYAKCIGLAFQIRDDILDVESDTETLGKPQGSDMAQN 244
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP L+G+E +++ A +L+ A E ++ A L +A YI R H
Sbjct: 245 KPTYPALIGMEASKQRARELVDDALESISPLG-PDADLLRFVARYIVERIH 294
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRYS+L GGKRVRP+L A+ EL D M VA A+E+IH SLVHDDLPC
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELALADTDRVMVVAAAVELIHAYSLVHDDLPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H F E TA+L GD+L +LAFE +A K P + IA+L A
Sbjct: 91 MDDDILRRGKPTCHIEFDEATALLTGDSLQTLAFELLAEKCLADEPGTQLEMIAQLAVAA 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ D+DS GK +SL ELE +H+HKT L+ AAV+ G N ++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKTLSLPELEFMHIHKTGALIRAAVMLGARCNNRLNNNQLGKLD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+C+GL FQVVDD+LD ++ LGKTAGKD ++K TY ++GI AR+ A L
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAENNKPTYVSILGISQARELAEKLQHD 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F A A L + +I R+
Sbjct: 271 AYQALDSFGEA-ALRLRQVTDFIIKRK 296
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 180/290 (62%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N+ LD+ + ++ P +I+EAMRYS LA G KR PV+C+A+CEL GG+ +A
Sbjct: 58 WTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAF 117
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+HT SL+HDDLPCMD+D RRG+P+NH ++G D AILAGDAL L + H+ +
Sbjct: 118 PTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVS 177
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ T + P+ R++R IAE+ AVGS G+ AG+ +D++ V + + K ++
Sbjct: 178 HTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEK-----KYGEMS 232
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E + VCG ++ G E++R+R+Y R +G+L+QV+DD+L+ +KE ++ +
Sbjct: 233 ECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKE-----NEEKRRNG 287
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y L GIE A + A +L QA +EL F PLY Y A R
Sbjct: 288 KSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADR 337
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 174/265 (65%), Gaps = 3/265 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ ++M+Y+LL+GGKR+RP+L + EL+ G+ +A+ ALEMIH+ SL+HDDLP MD
Sbjct: 32 QLTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHDDLPAMD 91
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
+D RRGK TNH VFGE TAILAGD LL+ AF+ +A E+ PD V+ IA G
Sbjct: 92 DDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLA--DLELKPDLKVKIIANTAKFSGY 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V G+++D+++E KD++L E++ +H KT L++A+V+ GV E + + YA
Sbjct: 150 QGMVGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKKALLTYA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
IG+LFQ+VDD+LD+T ++ +GK G+D +KATYPKL+G++ A+K A +A E
Sbjct: 210 EKIGVLFQIVDDLLDLTGETEAMGKVVGRDQELNKATYPKLLGLKKAQKEAEKYAKEAKE 269
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L F +A L L +I RQ
Sbjct: 270 ALIIFG-KKAEKLEALIDFILKRQQ 293
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 167/265 (63%), Gaps = 1/265 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRY++L GGKRVRP+L A+ + G +ACA+E+IH SLVHDD+PC
Sbjct: 35 PERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPC 94
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + + TA+L GDAL +LAF+ +A+ P R + I L A
Sbjct: 95 MDDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGLLAMAS 154
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
GS G+ G+ +D+ + G+ + L ELE +H+HKT L+ +V+ G G + +ER+ +
Sbjct: 155 GSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDR 214
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA+ GLLFQVVDDILD + LGKTAGKD DK TY L+G+ +AR+ A D+LA+A
Sbjct: 215 YAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPTYVSLLGVADARRLAQDMLAEA 274
Query: 261 TEELAYFEVARAAPLYHLAYYIASR 285
L ARA L LA YI R
Sbjct: 275 LAALEPLG-ARAGHLAALANYIVHR 298
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 221/291 (75%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+++ A+ V+ ALD +Q L P + E+MRYS+LAGGKR+RP L IA+CELVGG ++A+
Sbjct: 74 LSANARTVHDALDLALQGLGCPEVLRESMRYSVLAGGKRLRPALAIAACELVGGPAAAAV 133
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PVACA+EM+HT SL+HDD+PCMD+D RRG+P+NH FGE TA+L+GDALL+LAFEHVA
Sbjct: 134 PVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSGDALLALAFEHVAR 193
Query: 120 KSTE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDV-SLNELENIHLHKTAKL 176
S + DR +RA+ ELGSA G G+ AG++ D+ S+G SL LE IH+HKTA+L
Sbjct: 194 ASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLAALEYIHVHKTARL 253
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+EAA V G ++GGG EVERVR+YA +GLL QVVDD+LDVT +S++LGKTAGKD +
Sbjct: 254 VEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTATSEQLGKTAGKDAAAG 313
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KATYP+LMG+E AR + +LLA+A EL F+ ARA PL HLA ++A RQH
Sbjct: 314 KATYPRLMGMEGARAYMGELLAKAEAELDGFDAARAVPLLHLARFMAYRQH 364
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 170/264 (64%), Gaps = 3/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+MRYSLLAGGKR+RPVL +A+ E +G D +P+ LE+IHT SL+HDDLP MDND
Sbjct: 41 ESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDS 100
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGSAVGSE 143
RRGKPTNH ++G+ TAILAGDALL+ AF ++ + +S + ++ I EL G
Sbjct: 101 LRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVN 160
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+ MDI SEGK ++L+ LE +H HKT L+ A++ G ++G + + E + +Y +
Sbjct: 161 GMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQ 220
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+G+ FQ+ DD+LDV + LGK A KD K TYP LMG+E AR A L +A +
Sbjct: 221 AVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALDA 280
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
++ F +A L LA YI R++
Sbjct: 281 ISSFG-EKAKHLRELASYIIERRN 303
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 173/266 (65%), Gaps = 3/266 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +AM YSL++ GKR+RP+LCIA+ E VGG +S +P ACA+E+IHT SL+HDDLP +D
Sbjct: 51 QLSKAMEYSLISEGKRIRPILCIAAAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAID 110
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD--RVVRAIAELGSAV 140
ND RRGKPT H F E TAILAGDALL+LAF+ ++ + + + ++ I + +A
Sbjct: 111 NDLLRRGKPTCHAAFNEATAILAGDALLTLAFQVLSEFELHNNTNALKWLKIINLISTAA 170
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G G++ G++ DI SE + LN+LE +H+ KT L+ A+V G I+ ++ ++++++
Sbjct: 171 GYMGMIEGQMRDIASENTQILLNKLEELHILKTGALIVASVESGAILANASLDQIKQLKI 230
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA+ IGL FQ+ DD+L+ GK G D V K+TYP L+GI+ + +A L+ +A
Sbjct: 231 YAKKIGLAFQIADDLLNAMGDPTITGKPVGTDNVRKKSTYPSLLGIDESENYAKKLIKEA 290
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQ 286
LA F+ ++ PL +A YI R
Sbjct: 291 LHALAIFD-NKSDPLRAIALYIIERN 315
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 171/264 (64%), Gaps = 5/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+M YSL AGGKR+RPVL +A+ VGGD +P CALE+IHT SL+HDDLP MDNDD
Sbjct: 30 ESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDD 89
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
+RRG+ NHKVFGE AILAGDALL+ AFE +A + + R +RA+ E+ A G EG+
Sbjct: 90 YRRGRLANHKVFGEGQAILAGDALLTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGM 149
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+++D+++E K ++L ELE +H KT +L A G I+ GG ++E + YA+ I
Sbjct: 150 VGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAI 209
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DDILD+ S+ LGK DL K+TYP LMG+ A+ +L + E A
Sbjct: 210 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAK---LELKIKTDEAHA 266
Query: 266 YFEV--ARAAPLYHLAYYIASRQH 287
V RA L+ LA YIA R++
Sbjct: 267 ALAVLGERAGFLHELADYIAQRKY 290
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 163/267 (61%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + +AMRY++L GGKR+RP+L +A+C V GD ++A+ ACA+E+IH SLVHDD+PC
Sbjct: 61 PAGLCDAMRYAVLDGGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPC 120
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H +GE A+LAGDAL +LAFE + + R L A
Sbjct: 121 MDNDVLRRGKPTVHVQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAA 180
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G +G+ G+ +D+ S G ++ +L +H KT LL+A+V+ G G + + +R
Sbjct: 181 GYQGMAGGQAIDLASVGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRD 240
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y IGL FQVVDDILDVT + LGKTAGKD DK T+ LMG++ +R +A L AQA
Sbjct: 241 YGAAIGLAFQVVDDILDVTADAATLGKTAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQA 300
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L + L LA + +RQH
Sbjct: 301 LASLRASGLENTQALQALADMLVNRQH 327
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 157/230 (68%), Gaps = 2/230 (0%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
A +HEAM YSL AGGKR+RP+L +A+ + +GGD V+ ALE IHT SL+HDDLP M
Sbjct: 30 APLHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAM 89
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD RRGKPT+H V+GEDTAILAGDALL+ AFE +A ++ SP++ V+ I L + G
Sbjct: 90 DNDDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIAV--SDASPEKKVKLILALAKSAG 147
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
EG++ G++ DI E KD+SL EL+ IH +KT +LL+ + +I E++ Y
Sbjct: 148 PEGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGY 207
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
A IGL +Q+ DDILDV + +E+GK G D +K+TYP L+ +E A+K
Sbjct: 208 AEHIGLAYQIRDDILDVIGNVEEIGKNIGMDAAHNKSTYPGLLTLEGAKK 257
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 160/242 (66%), Gaps = 2/242 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P++IHEAM YS+ AGGKR+RPVL +AS EL E AMP A A+E +HT SL+HDDLP
Sbjct: 29 PSRIHEAMLYSMRAGGKRLRPVLVLASKELFD-SELDAMPAAIAVECLHTYSLIHDDLPS 87
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
+D+ D RRGKPT+HK F E TA+LAGDALL+ AF+ + A+ +PD + ELG
Sbjct: 88 IDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAFQ-LLARHFANAPDVCANLVGELGETA 146
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
GSE L+ G++ DI EG +S + L IHL+KT+ L+E +V G IIGG N +++ +R
Sbjct: 147 GSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTSALIECCLVMGGIIGGANYEQIDALRT 206
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y R IG+ FQ++DDILD T +GK+ G D DK TY KL G+E +R+ A +A
Sbjct: 207 YGREIGIAFQIIDDILDATSDETTMGKSIGSDAELDKTTYVKLHGLEKSRELAAQRTQKA 266
Query: 261 TE 262
+
Sbjct: 267 IQ 268
>gi|421860464|ref|ZP_16292588.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
gi|410829946|dbj|GAC43025.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
Length = 284
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 165/268 (61%), Gaps = 2/268 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++ EAM YSL+AGGKR+RP+ I +CE +GG +A PVACA+EM+HT SLVHDDLP
Sbjct: 16 PAELKEAMLYSLMAGGKRLRPLCVIIACESLGGPLEAADPVACAIEMLHTYSLVHDDLPA 75
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELGS 138
MDNDD+RRGKPTNHKVFGE AILAGDALL+ AF VA A+ I + + EL
Sbjct: 76 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQSARRHSIPAEIALTITEELSV 135
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G+ DI E +L +LE IHLHKT+ L+ A+ G + G N ++ +
Sbjct: 136 YAGMRGMVGGQTADILGEQGMTTLVQLEYIHLHKTSDLIVFALRAGAHLAGANGSQLNAL 195
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
++ +GL FQ+ DDILD+T LGK G D K TYP +G+E +++ L
Sbjct: 196 TEFGTKLGLAFQIQDDILDITGEEVLLGKPTGSDEKCGKVTYPYFIGLEASKQEVVRLTE 255
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQ 286
+A + + A LY LA ++ RQ
Sbjct: 256 EAKQAVRQAGFPFPARLYELADFLLKRQ 283
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 170/287 (59%), Gaps = 6/287 (2%)
Query: 5 AKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
K + KALD + +P KIHEAMRYS GGKR+RPVL + + EL G +P A
Sbjct: 12 GKIIEKALDFYIPKSNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAAELFGLQGEKVIPTA 71
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AK 120
C +EMIHT SL+HDDLP MDNDDFRRGKPT HKVFG+ A+LAGDALL+LAF + A+
Sbjct: 72 CGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTLAFNTIVKNAQ 131
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
IS V+ I + A GS G++ G+ +DI S+G + L + HKT L++A+
Sbjct: 132 IEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMDYHKTGCLIQAS 191
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+ G + ++ ++ + IGL+FQ+VDD+LD+ K+LGK G D+ + K+T+
Sbjct: 192 LWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPVGSDVRNKKSTF 251
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P + G EN+ K DL +A E + E L ++ RQ+
Sbjct: 252 PSVYGYENSVKLIKDLSEEAKEII--LEFKNGEFFVQLVDFLVERQY 296
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 194/289 (67%), Gaps = 4/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T++ K +++ALD + P IH+AMRYSL AGGKR+RP L +A+ E G+ + A
Sbjct: 7 LTARGKLIDQALDRFLPRASVKPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDGEVARA 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+E IHT SL+HDDLPCMD+DD RRG+PT+HKVFGE A+LAGDALL++AFE +
Sbjct: 67 LPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLTIAFE-IL 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A++ E S ++ I EL A GS+ L+ G++ D++ EGK +S EL+ IH KTA LL
Sbjct: 126 AQAKETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHRCKTAALLT 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A++ G + + ++ + ++ + +GL FQV+DDILDVT+++++LGKTAGKD+ + KA
Sbjct: 186 ASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGKDVAATKA 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP + G+E +R+ A L A L F + A L A Y+ R +
Sbjct: 246 TYPAIFGLERSREEAHRLTLAAHAALKPFGKS-GATLRAFADYLLVRDY 293
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 173/267 (64%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY+ L GGKRVRP+L A+ EL G + V CA+EMIH SLVHDDLPC
Sbjct: 32 PARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPC 91
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRG+PT H F E TA+L GD+L ++AFE +A++ P + + IA L A
Sbjct: 92 MDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLG-EPKQQLEIIALLAHAS 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ S GK ++ ELE +H KT L+ AAV+ G + G + E +
Sbjct: 151 GSRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERTSLD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
++A+ GLLFQVVDDILD T S+ LGKTAGKD +DK TY L+G++ AR +A +L A
Sbjct: 211 RFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVALLGLDAARTYADELRAD 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L+ F RA+ L LA +I RQ
Sbjct: 271 ARDALSIFG-ERASRLNQLADFICHRQ 296
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 182/290 (62%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIH-EAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ + + V +ALD+ + + P H EAMRYSLLAGGKR+RP+LC+A+ E + D
Sbjct: 7 LNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAGGKRIRPILCLAAAEALPTDSRPL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+PVA ALE IHT SL+HDDLP MD+DD RRG PT HK FGE AILAGD LLS AFE +A
Sbjct: 67 LPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSFAFELLA 126
Query: 119 AK--STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ IS + I + +A+G G+V G+++DI++EG+ + L +L+ IH KT L
Sbjct: 127 RPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHRCKTGAL 186
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ AV G I GG + + E + Y IGL FQ+VDD+L+VT S LGK AG D
Sbjct: 187 ITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAGSDAARG 246
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KATYP L+G+E R+ A + +A A L F A PL LA YIA+R+
Sbjct: 247 KATYPALLGLEATRRQADEAVAGAITALNGFG-EEAEPLRELARYIAARR 295
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M ++ KALD + + PA +H+AMRYS+ AGGKR+RPVL +A+ E+VGG
Sbjct: 10 MEARRDLAEKALDAMLPPEDNEPAVLHQAMRYSVFAGGKRIRPVLAMAAAEVVGGSGKQV 69
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLS--LAFEH 116
+P+A ALE IHT SL+HDDLP MDNDD RRGKPT HKVFGE AILAGDALL+ L
Sbjct: 70 LPLAVALECIHTYSLIHDDLPAMDNDDLRRGKPTVHKVFGEAVAILAGDALLTYGLGVLS 129
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ S + ++ AI EL A GS L+AG++MDI EGKDV + +E I +KT L
Sbjct: 130 LPEVSRTYRAENLLAAIRELALAAGSTRLIAGQVMDILCEGKDVDKHMVEYIVRNKTGAL 189
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ A++VCG + G + +E + K+ +G++FQ+ DD+LD+ ++GK KD
Sbjct: 190 IRASLVCGATLVDGELERIEVLGKFGDLLGMIFQIRDDLLDIEGDPVKMGKAVQKDGDRG 249
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
KAT P+L+G E + L+ A + + A PL + +YI R
Sbjct: 250 KATLPRLLGAERTEEIMYSLIRNAEDTIRPLG-ETANPLVQITHYIGKR 297
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/265 (46%), Positives = 168/265 (63%), Gaps = 2/265 (0%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
+++ EAM YS LAGGKR+RP+L +A+ + VGG + +P+A ALEMIHT SL+HDDLP M
Sbjct: 29 SRVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDFLPLASALEMIHTYSLIHDDLPEM 88
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD+RRG+ TNHKVFG+ A+LAGD LL+ AFE V + + P +V I + G
Sbjct: 89 DNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAFE-VMTEQKGVDPALMVEIIHLIARCAG 147
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
EG+V G+ +DI++E K + E++ +H KT L AA+ G ++GGG+ EV + K+
Sbjct: 148 PEGMVGGQALDINAEEKHLEPAEMKQLHEAKTGALFIAAIRSGALLGGGSKDEVNALTKF 207
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A GL FQ+ DDILDV SK +GK AG D K+TY L +E A+ A D L +A
Sbjct: 208 ATFFGLAFQITDDILDVEGDSKIMGKMAGMDEKMHKSTYVSLFTLEGAKAMALDTLKKAE 267
Query: 262 EELAYFEVARAAPLYHLAYYIASRQ 286
L F RA PL +A ++ +R
Sbjct: 268 LTLEPFG-ERAEPLLAIARHLYNRN 291
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 172/269 (63%), Gaps = 3/269 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P IH AMRYS+ AGGKR+RP + IA+ E VGG MP ACALE+IHT SL+HDDLP
Sbjct: 29 PEIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGGSADKVMPAACALELIHTYSLIHDDLPS 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGS 138
MD+DD+RRGKPTNHKVFGE AILAGDALL+++F+ +A S I+P VVR IA++ +
Sbjct: 89 MDDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPADVVRVIADISA 148
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G+ GL+ G+++DI S +++ LE IH KT L AA+ G ++ G + E++ +
Sbjct: 149 AAGTTGLIGGQVVDIVSANQEIDAGTLEYIHTKKTGALFRAAIRSGAVLSGADDEELKSL 208
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
YA GL FQ+ DDILDV ++ GK G D ++KATYP L G+E A + A
Sbjct: 209 TNYAEHFGLAFQITDDILDVAGDMQKTGKPVGSDEKNNKATYPALYGLEEAYRLAGYSAE 268
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
QA L F +A L L ++ +R H
Sbjct: 269 QALYALEPFG-EKANFLKELVKFVVNRDH 296
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 173/267 (64%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ E+M YS++AGGKR+RPVL +A +++ GD MP A A+EMIHT SL+HDDLP MD
Sbjct: 33 RLVESMSYSVMAGGKRIRPVLMLAVTKMLSGDPQEVMPFAAAIEMIHTYSLIHDDLPAMD 92
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP--DRVVRAIAELGSAV 140
NDD+RRGK TNHKVFGE AILAGDALL+ AF + S + V+A + A
Sbjct: 93 NDDYRRGKLTNHKVFGEAMAILAGDALLNEAFSLLFEASANAGDKMEHWVKASCIIARAA 152
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G +G++AG+++D++SEG VS +L+ +H KT L+ A+V+ + G + +++ + +
Sbjct: 153 GRDGMIAGQVIDMESEGTQVSATKLKTMHRKKTGALITASVIVPAVFLGLSEDKIKALTE 212
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA IG+ FQ+ DDILDV + +ELGK G D + K TY L G++ A++ ++ +A
Sbjct: 213 YAENIGIAFQIRDDILDVEGTIEELGKPVGSDERNRKTTYVSLYGLDGAKEMLREVTRKA 272
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
E L F RA L +AYYIA R++
Sbjct: 273 VESLDVFG-ERAWFLKEIAYYIAERRN 298
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 170/266 (63%), Gaps = 1/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H AMRYS+L GGKRVRP+L A+ EL G A A+E+IH SLVHDD+PC
Sbjct: 30 PQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAAAAVELIHAYSLVHDDMPC 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL SLAF+ ++ P R ++ + L +A
Sbjct: 90 MDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAAS 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
GS G+ G+ +D+ S GK +++ ELE +H++KT L+ AA++ G G + +++++ +
Sbjct: 150 GSRGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAAILLGAHCGKLDQAQLDKLDR 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y +CIGL FQVVDD+LD + LGKTAGKD +DK TY L+G++ A++ A L +A
Sbjct: 210 YGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTYVTLLGVQAAKRMAATLHQEA 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQ 286
+ L F A A L+ LA +I R+
Sbjct: 270 LDTLKEFG-ASAQRLHDLADFIVMRK 294
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 162/267 (60%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + +AMRY++L GGKR+RP+L +A+CE V G+ +A+ ACA+E+IH SLVHDD+PC
Sbjct: 40 PAGLGDAMRYAVLDGGKRLRPLLVMAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPC 99
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H FGE A+LAGDAL +LAFE + + R L A
Sbjct: 100 MDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFEFLTPDDGSVDAATQARLCRMLAQAA 159
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G +G+ G+ +D+ S G ++ +L +H KT LL+A+V+ G G +R+
Sbjct: 160 GFQGMAGGQAIDLASVGLPLTSGQLHEMHRLKTGALLQASVMMGTACGAAPPAAQHALRE 219
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y +GL FQVVDDILDVT S LGKTAGKD DK T+ LMG++ ++ +A LL +A
Sbjct: 220 YGAAVGLAFQVVDDILDVTADSATLGKTAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKA 279
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L + L+ LA + +R H
Sbjct: 280 LASLDASGLGNTHALHALADMLVNRHH 306
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 178/270 (65%), Gaps = 5/270 (1%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDD 77
+ P IH+AMR+S+ AGGKR+RP+L + + ++ G + + ALEM+HT SL+HDD
Sbjct: 48 QRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELGAALEMLHTYSLIHDD 107
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP +DNDD RRG+PT H FGE TAILAGDAL + A+E +A T + + V+ I E+
Sbjct: 108 LPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRT--TAEARVQIIEEVA 165
Query: 138 SAVGS-EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G+ +G++ G+++D+++E +E IH KT L+ A+VV G + G + +V+
Sbjct: 166 HATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGALITASVVAGGLYAGADKAQVQ 225
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
R+R++ + GL FQ+VDD+LDVT++S++LGKTAGKD S+K+T+P L G++ + + A +L
Sbjct: 226 RIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDTKSEKSTWPSLYGVDKSLEMADEL 285
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+ A + L F RA L LA ++ R+
Sbjct: 286 VYTANKRLDSFG-ERATTLKELAKFLVERK 314
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 161/246 (65%), Gaps = 1/246 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSLL GGKR+RP+L A + + D S CALE IHT SL+HDDLP MD
Sbjct: 30 RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+G+ AILAGD LL+ AF+ + +++T S ++ ++AI L +A G
Sbjct: 90 NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQ-LCSENTTASAEQKIKAIQCLATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SEGK + L EL+ +H KT L AA+ G+I+ + + YA
Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ DK+TY L+G++ AR A + +A
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGLDEARNEAHVVAQKAHA 268
Query: 263 ELAYFE 268
LA E
Sbjct: 269 ALATIE 274
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T++A +N +L + +P IHEAMRYS AGGKR+R VL +A+ ++G +E
Sbjct: 7 LTTRADLINSSLQSLLPPASCYPPVIHEAMRYSSFAGGKRLRGVLTLATAGMLGLEEERV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P A A+EMIHT SL+HDDLP MD+DD+RRG+PT H+VFGE AILAGDALL+LAFE ++
Sbjct: 67 LPAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRPTCHRVFGEAIAILAGDALLTLAFETLS 126
Query: 119 A-KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ V++ I E+ S GS GLV G+++D++SEGKD+ + LE IH HKT L
Sbjct: 127 RLAEGGFASSVVLQVIQEVASGAGSRGLVGGQVVDLESEGKDIEASVLEYIHRHKTGALF 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AA+ G I+ G E+ + YA GL FQ+ DDILD+ S ++LGK G+DL K
Sbjct: 187 RAAIRSGAILAGAGDKELTALTGYAEAFGLAFQITDDILDLAGSEEKLGKKTGRDLARGK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L G++ AR+ A + + LA F A L A Y+ SRQ
Sbjct: 247 VTYPGLFGMKKAREMAACQVEKCLMSLAVFG-PEAEFLREAALYLLSRQ 294
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 170/264 (64%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ E+M YSL+ GGKR+RPVL +A+ E VGG+ +P A ALE+IHT SL+HDDLP MDN
Sbjct: 30 LSESMSYSLVGGGKRIRPVLALAAAEAVGGNPEKILPAAIALELIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG+ +NHKVFGE AILAGD LL+ AFE +A P++ +R I E+ +A G
Sbjct: 90 DDYRRGRLSNHKVFGEANAILAGDGLLTYAFEFLADPILG-QPEKQLRVIREVAAAAGKN 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++DI E K +SL E+E IH KT LL A+ G I+ GG+ ++E + YA+
Sbjct: 149 GMVGGQVLDIAGEEKKLSLTEIEEIHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQ 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILDV S+ LGK AG DL K+TY L+G+E A+ +A
Sbjct: 209 ALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRAQSA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L FE + L LA YI RQH
Sbjct: 269 LKLFE-RNFSFLSELAVYIEQRQH 291
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 165/270 (61%), Gaps = 15/270 (5%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
EAM YSLLAGGKR+RP L + C + GGD +AMP ACA+EMIH+ SL+HDDLPCMDN D
Sbjct: 31 EAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMPFACAVEMIHSYSLIHDDLPCMDNSD 90
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS------- 138
RRG+P NH +GED A+LAGD LL+LAFE T +SP+ + A A+ G+
Sbjct: 91 LRRGRPANHIQYGEDIALLAGDGLLTLAFE------TALSPESIKLAGAQRGAEAARLLA 144
Query: 139 -AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G+EG+V G+++D+ E + + L + KT L++AA G + G + + E
Sbjct: 145 KAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAAAQMGCAVAGADQKQREA 204
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+YA C+GL FQ+ DDILDV + LGK G D ++K+TY L+G+E A++ +L
Sbjct: 205 AVEYAACVGLAFQIRDDILDVISDPETLGKPVGSDDKNEKSTYVSLLGMEKAQQLVNELT 264
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
QA L+ F A L A +A+R +
Sbjct: 265 QQAESALSAFS-EDTAFLREFAQSLANRGY 293
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 180/290 (62%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N L+E + +++P +I+EAMRYS+LA GGKR PV+C+A CEL GGD +A
Sbjct: 54 WTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAF 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRG+P+NH V+G D AILAGDAL L F H+ +
Sbjct: 114 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVS 173
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + + P+ +++R IAE+ +VGS G+ AG+ +D++ + N ++ + K ++
Sbjct: 174 HTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEG-----APNSVDFVQRKKFGEMA 228
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E + VCG +GG ++ R+R+Y R +G+L+QVVDD+L S+E +
Sbjct: 229 ECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEKK-----KKG 283
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y + G+E A + A +L A+A EL+ F+ PLY + A R
Sbjct: 284 KSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|401680086|ref|ZP_10812010.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429759440|ref|ZP_19291939.1| putative geranyltranstransferase [Veillonella atypica KON]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|400219213|gb|EJO50084.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429179716|gb|EKY20955.1| putative geranyltranstransferase [Veillonella atypica KON]
Length = 292
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 161/246 (65%), Gaps = 1/246 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSLL GGKR+RP+L A + + D S CALE IHT SL+HDDLP MD
Sbjct: 30 RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+G+ AILAGD LL+ AF+ + +++T S ++ ++AI L +A G
Sbjct: 90 NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQ-LCSENTTASAEQKIKAIQCLATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SEGK + L EL+ +H KT L AA+ G+I+ + + YA
Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ DK+TY L+G++ AR A + +A
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGLDEARNEAHVVAQKAHA 268
Query: 263 ELAYFE 268
LA E
Sbjct: 269 ALATIE 274
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 197/290 (67%), Gaps = 6/290 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+TS+ +RV +AL +T+ + +HP ++HEAM YS+ AGGKR+RP+L +A+CE VGGD +
Sbjct: 7 LTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGDIENV 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+EMIHT SL+HDDLP MD+DD RRG+PTNHKVFGE TAILAGDALL+ AF ++
Sbjct: 67 LPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAFVVLS 126
Query: 119 AKSTEIS-PDRVVRAIAE-LGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAK 175
A S + DR R + + L A G+ G+V G+I+D+++EG + L ++ IH HKT
Sbjct: 127 APSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHAHKTGA 186
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L+ A++ G ++GG N + E + ++ + GL FQ+ DDILD+T ++LGK G D
Sbjct: 187 LILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLGKDIGSDQER 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
KATYP ++G+ + + A +L QA + L A A PL +++YI +R
Sbjct: 247 GKATYPAVLGLSESIRRATELHQQALKALEPLADA-AEPLRQISHYIINR 295
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 169/264 (64%), Gaps = 3/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+MRYSLLAGGKR+RPVL +A+ E + D +P+ LE+IHT SL+HDDLP MD+D
Sbjct: 41 ESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDS 100
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGSAVGSE 143
RRGKPTNH ++G+ TAILAGDALL+ AF ++ + +S + ++ I EL G
Sbjct: 101 LRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGIN 160
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+ MDI SEGK ++L+ LE +H HKT L+ A++ G ++G + + ER+ +Y +
Sbjct: 161 GMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQ 220
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+G+ FQ+ DD+LDV + LGK A KD K TYP LMG+E AR A L +A E
Sbjct: 221 AVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALEA 280
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
+ F +A L LA YI R++
Sbjct: 281 IGSFG-EKAKHLRELASYIIERRN 303
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 178/289 (61%), Gaps = 4/289 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ ++++ + K LD+ V RH + EA RY+LL+GGKR+RP+L + + + + GD A
Sbjct: 8 LQTQSQLIEKRLDQLVSKRHGPHQNLIEAARYALLSGGKRLRPILALTTVQTLHGDIQEA 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ AC LE+IHT SL+HDDLPCMDNDD+RRGK T H+ + E A+L GD LL+ AFE +
Sbjct: 68 LSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYAFE-LL 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A ++ ++ V+ I L G +G++ G+ +D+ SEG+ ++L L +H +KTA L+
Sbjct: 127 ATDKYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNKTAALIT 186
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V G I+ ++ +R++ IGL FQ+ DDILD+T S + G+ G D++ DK+
Sbjct: 187 ASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSDILKDKS 246
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TY L+GIE A+ +A + +A L + L HLA +I R +
Sbjct: 247 TYVSLLGIEQAKAYALNFYQKAINALKLLPYDNSF-LIHLADFIIHRHY 294
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 174/271 (64%), Gaps = 3/271 (1%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
Q+ PA + E+M YSL AGGKR+RP+ +A EL + + V +E+IHT SL+HD
Sbjct: 26 QIDAPADLKESMLYSLKAGGKRIRPLFVLAVLELYRENLQDGLIVGSVIEIIHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP MDNDDFRRGKPTNHKV+GE A LAGDAL +LAF +A +I+ ++ + + L
Sbjct: 86 DLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILA--RMDIAAEKRIELVQLL 143
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G+EG+V G+++D++ E + ++L ELE +H++KT LL ++ G ++ + +
Sbjct: 144 SIAAGAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKTGALLRFSIEAGAVLADVSAQDRA 203
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+++YA IGL FQ+ DDILD+ +++ELGKTAGKD+ SDK+TYP L+ +E A++ +
Sbjct: 204 TLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLEGAKEKLAEH 263
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
A L + + L A YI R++
Sbjct: 264 YQHAINALDQLPI-DVSLLRDFAAYIVHRKN 293
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 180/290 (62%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N L+E + +++P +I+EAMRYS+LA GGKR PV+C+A CEL GGD +A
Sbjct: 54 WTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAF 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRG+P+NH V+G D AILAGDAL L F H+ +
Sbjct: 114 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVS 173
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + + P+ +++R IAE+ +VGS G+ AG+ +D++ + N ++ + K ++
Sbjct: 174 HTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEG-----APNSVDFVQRKKFGEMA 228
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E + VCG +GG ++ R+R+Y R +G+L+QVVDD+L S+E +
Sbjct: 229 ECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEKK-----KKG 283
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y + G+E A + A +L A+A EL+ F+ PLY + A R
Sbjct: 284 KSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 169/267 (63%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRYS+L GGKRVRP+L A+ ELV D VA A+E+IH SLVHDDLPC
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GD+L +LAFE +A K P+ ++ IA+L A
Sbjct: 91 MDDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQLQMIAQLALAS 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ D+DS GK +SL ELE +H+HKT L+ AAV+ G N ++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+C+GL FQVVDD+LD ++ LGKTAGKD +K TY ++G+ AR+ A L
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNKPTYVSILGVSQARELAEKLQHD 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F A A L + +I R+
Sbjct: 271 AYQALDGFNEA-ALRLRQVTDFIIKRK 296
>gi|410460635|ref|ZP_11314310.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
gi|409926893|gb|EKN64045.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
Length = 275
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/271 (49%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
++ P I E+M YSL AGGKR+RP+L A+ G DE + VACALEMIHT SL+HD
Sbjct: 7 KIEAPEIIKESMIYSLNAGGKRLRPILLFATLHAFGKDEKLGIDVACALEMIHTYSLIHD 66
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP MD+DD RRGKPTNHKV+GE AILAGD LL+ +FE + AKS E+S IA L
Sbjct: 67 DLPSMDDDDLRRGKPTNHKVYGEAVAILAGDGLLTHSFE-IIAKSKELSDTLKANIIAFL 125
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G G+V G++ D+ E KD+++ ELE IH HKT KLL AVV G II G + + E
Sbjct: 126 AQAAGPSGMVGGQVADLLGEQKDLNVEELEYIHEHKTGKLLRFAVVAGAIIAGASKDQQE 185
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+ ++AR +GL FQ+ DDILD+ K++GK G D+ DK+TYPKL+ +E A+ D
Sbjct: 186 CLDQFARHLGLAFQIKDDILDIEGDVKQIGKPVGSDVGKDKSTYPKLLTLEGAKNKCNDH 245
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L A E L V + L +A YI +R H
Sbjct: 246 LTSAKEWLEKANV-ESDLLLEIADYIVNRDH 275
>gi|424735521|ref|ZP_18163984.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
gi|422950178|gb|EKU44547.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 174/271 (64%), Gaps = 3/271 (1%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
Q+ PA + E+M YSL AGGKR+RP+ +A EL + + V +E+IHT SL+HD
Sbjct: 26 QIDAPADLKESMLYSLKAGGKRIRPLFVLAILELYRENLQDGLIVGSVIEIIHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP MDNDDFRRGKPTNHKV+GE A LAGDAL +LAF +A +I+ ++ + + L
Sbjct: 86 DLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILA--RMDIAAEKRIELVQLL 143
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G+EG+V G+++D++ E + ++L ELE +H++KT LL ++ G ++ + +
Sbjct: 144 SIAAGAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKTGALLRFSIEAGAVLADVSAQDRA 203
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+++YA IGL FQ+ DDILD+ +++ELGKTAGKD+ SDK+TYP L+ +E A++ +
Sbjct: 204 TLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLEGAKEKLAEH 263
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
A L + + L A YI R++
Sbjct: 264 YQHAINALDQLPI-DVSLLRDFAAYIVHRKN 293
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 194/289 (67%), Gaps = 11/289 (3%)
Query: 5 AKRVNKALDE-----TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
A RV ALD+ +VQ P+++HEAMRY++LAGGKR+RP+L A+ E +G D +
Sbjct: 14 AARVETALDQILPPVSVQ---PSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGLDAALLD 70
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EMIH SL+HDDLP MD+DD RRG+PT H+ F E TAILAGDAL +LAF+ + A
Sbjct: 71 HPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQAL-A 129
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
++ +S + V ++ L A G+ G+V G+ MD+++EG + L +LENIH+HKT L+
Sbjct: 130 EAPGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHKTGALIRV 189
Query: 180 AVVCGVIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V GV+ GG + + ER+ YA+C+GL FQ+ DD+LDV + ++GKTAG+D +KA
Sbjct: 190 SVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQELNKA 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G+ A+ A L+ +A E ++ F RA PL +A + R++
Sbjct: 250 TYPALVGLAEAKAMANQLINEAIESVSIFG-ERAQPLVWIANALLGRKN 297
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 177/288 (61%), Gaps = 12/288 (4%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES--SAMPVAC 63
++++K LD + P I+EAMRYS+ AGGKR+RP+LC+ S EL+ G E+ + +AC
Sbjct: 15 EKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKEADEKVLDIAC 74
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA----FEHVAA 119
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+ A F +
Sbjct: 75 AIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKAAEVCFNWILR 134
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVS-LNELENIHLHKTAKLLE 178
+ + ++A L A G+EG++ G+++D+ + GK+++ N L +HL KT+KL++
Sbjct: 135 NK---AKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLKKTSKLIQ 191
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+ VCG + G + +Y + +GL FQ+ DDILD SK++GK+ GKD+ K
Sbjct: 192 ASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGKDIKEKKN 251
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
T+ GIE A+ + +A E + ++ R L Y+ +R+
Sbjct: 252 TFVTFYGIEKAQNYVESFSKKAIEIVEKYD--RMGLFIELTNYLITRE 297
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 175/284 (61%), Gaps = 4/284 (1%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV +AL++T+ + P ++HEAMRY++L GGKR+RP+L ++ VG E++ A A
Sbjct: 14 RVEQALEKTLPPASKPPKRLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALDAPASA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SLVHDDLP MDNDD RRG+PT HK FGE TA+LAGDAL +LAF +A ++ I
Sbjct: 74 VELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQALAFRILAEPASTI 133
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+ + + L A GS G+ G+ +D+DS G ++L+E+E +H KT L+ A+V+ G
Sbjct: 134 PAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRASVLLG 193
Query: 185 VIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+E++ +A+CIGL FQ+ DD+LDV + LGK G D DK TYP L
Sbjct: 194 AWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSL 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G+ A+ A LL A + L + A L LA +I R+H
Sbjct: 254 LGLIQAKARAQSLLEDAHQALRAID-ASTEHLEWLADFIVKRRH 296
>gi|372490114|ref|YP_005029679.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
gi|359356667|gb|AEV27838.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
Length = 302
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/267 (49%), Positives = 168/267 (62%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H+AMRYS L GGKRVRP+L A+ EL G + VACA+EMIH SLVHDDLPC
Sbjct: 37 PQGLHDAMRYSALGGGKRVRPLLAFAAGELCGATAEALDCVACAVEMIHVYSLVHDDLPC 96
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRG+PT H + E TA+L GDAL S AFE +AA+ SP + + + L
Sbjct: 97 MDDDVLRRGRPTCHVQYDEPTALLVGDALQSRAFEILAAQPWP-SPAQGLELVRLLAHGS 155
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ S GK + +LE +H KT L+ AAV+ G G E+ER+
Sbjct: 156 GSCGMAGGQAIDLASVGKSLDQPQLELMHALKTGALIRAAVLMGAHCGTPLAAAELERLD 215
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+ GLLFQVVDDILD T S+ LGKTAGKD +DK TY +L+G+E AR+ A DL
Sbjct: 216 AFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVRLLGLETARQLADDLRRD 275
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A L F RA L LA+YI +R+
Sbjct: 276 ALGALEGFG-PRARRLIELAHYITTRK 301
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRY++L GGKRVRP+L A+ EL +E A A+E+IH SLVHDDLPC
Sbjct: 31 PERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H +GE A+L GD+L SLAF+ +A S +P + I L A
Sbjct: 91 MDDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAA 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ S G+ +SL ELE +H+HKT L+ AAV+ G G + ++ +
Sbjct: 151 GSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALD 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+A+CIGL FQVVDD+LD ++ LGKTAGKD ++K TY ++G + AR+ A +L +
Sbjct: 211 HFAKCIGLAFQVVDDVLDAEATTAALGKTAGKDAENNKPTYVSILGSKRARELAEELRRE 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A L FE A A L + +I R+
Sbjct: 271 AYASLEMFEAA-AGRLRQVTDFIIHRE 296
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 180/290 (62%), Gaps = 15/290 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N L+E + +++P +I+EAMRYS+LA GGKR PV+C+A CEL GGD +A
Sbjct: 54 WTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAF 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRG+P+NH V+G D AILAGDAL L F H+ +
Sbjct: 114 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVS 173
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + + P+ +++R IAE+ +VGS G+ AG+ +D++ + N ++ + K ++
Sbjct: 174 HTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEG-----APNSVDFVQRKKFGEMA 228
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E + VCG +GG ++ R+R+Y R +G+L+QVVDD+L S+E +
Sbjct: 229 ECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDMLKAKTKSEEDEEKK-----KKG 283
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+Y + G+E A + A +L A+A EL+ F+ PLY + A R
Sbjct: 284 KSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|379011176|ref|YP_005268988.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
gi|375301965|gb|AFA48099.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
Length = 298
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 174/291 (59%), Gaps = 6/291 (2%)
Query: 1 MTSKAKRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
++SK +N L+ + L P I EAM+YSL AGGKR+RP+L + +C + GD
Sbjct: 8 LSSKVSAINSDLEMAFEQNLDTPEVIIEAMKYSLFAGGKRLRPILMMETCRALEGDVELI 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
P+A +EMIHT SL+HDDLP MDNDD RRGK TNHKV+G+ AILAGD LL+ A E +
Sbjct: 68 KPLAMGIEMIHTYSLIHDDLPAMDNDDLRRGKATNHKVYGDAMAILAGDGLLNYAAETML 127
Query: 119 AKSTEISPDRVV---RAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
A + +S D +V A+ + A G G++ G++ D+ SE K + L+E+ IHLHKTA
Sbjct: 128 AGAHNLSGDTLVNYLNAMKSIMGAAGIRGMIGGQVADMLSENKIIDLDEMNYIHLHKTAA 187
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
LLEA V G II G R+ Y+ IGL FQ+VDDILD+ +LGK G D +
Sbjct: 188 LLEACVQSGCIIAGAEPATQGRLISYSHRIGLAFQIVDDILDIEGDEVDLGKPIGSDEKN 247
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
K+T+ L G+E ++ +L +A E L R A L LA YI R+
Sbjct: 248 HKSTFVSLYGLEASKIRVTELETEAIELLKPIG-PRTAFLSQLATYICRRR 297
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 12/263 (4%)
Query: 1 MTSKAKRVNKALDETVQLRH--------PAKIHEAMRYSLLAGGKRVRPVLCIASCELVG 52
MT K N+A QLRH P + EAM YSL AGGKR+RP+L +A+ E +G
Sbjct: 5 MTIKDYIQNEARFVEEQLRHFLPSAWDVPQPLKEAMAYSLHAGGKRLRPILVLAAAESLG 64
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
G+ +A+P+ACA+EM+HT SL+HDDLP +DNDDFRRG PTNHKV GE AILAGDALL+
Sbjct: 65 GNREAALPIACAVEMVHTYSLIHDDLPALDNDDFRRGMPTNHKVHGEAMAILAGDALLTH 124
Query: 113 AFEHVAAKS---TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIH 169
AF +VA+ + + I+P++ + I + G+ G+V G++ D+ E L EL+ IH
Sbjct: 125 AF-YVASDACLRSGIAPEQGLALIRDFAEFAGARGMVGGQVADMVGEQGITRLEELQYIH 183
Query: 170 LHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 229
HKT L+ +V G + N +++ + K+ R IG+ FQ++DDILD+T ++LGK
Sbjct: 184 THKTGDLIVFSVKAGGRLANANEEQMKALEKFGRSIGMAFQILDDILDITGDEQKLGKPV 243
Query: 230 GKDLVSDKATYPKLMGIENARKF 252
D K TYP +G+E ++K
Sbjct: 244 KSDEKQQKVTYPYFIGLEESKKL 266
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 150/234 (64%), Gaps = 4/234 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P I AM+YSL AGGKRVRP+L + +C + GGDE A+P ACA+EMIHT SL+HDDLP
Sbjct: 40 PDIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPA 99
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG--- 137
MDNDD RRG+PTNHKV+GE+ AILAGDALL+ A E + P R IA L
Sbjct: 100 MDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLM 159
Query: 138 SAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G G++ G+ D+ +E D ++ +++ IH HKT LL AAV+ G ++ G + E +
Sbjct: 160 RAAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQ 219
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
+R Y IG+ FQVVDDILDV + LGK G D K T+ L G+E+A+
Sbjct: 220 ALRNYGSAIGMAFQVVDDILDVESETAVLGKPVGSDAEESKTTFVSLFGLESAK 273
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 175/269 (65%), Gaps = 2/269 (0%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ I EAM YSL AGGKR+RP+L + + +L G +P + A+EMIHT SL+HDDLP
Sbjct: 28 YQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS-PDRVVRAIAELGS 138
+DNDD RRGKPTNH VFGE AILAGDALL+ A+E + + + S P+ +RA E+
Sbjct: 88 ALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNAAFKHSRPEISLRAAYEISR 147
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G++ G+++D++SE K + ++L+ IH++KTA ++ +V G I+ G + +E +
Sbjct: 148 GAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESL 207
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
KYA IGL FQ+VDDILD+ K LGK G DL +DK+TYP L+GI+ ++K +L+
Sbjct: 208 TKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGIDASKKIVENLIE 267
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L F + A + LA +I RQ+
Sbjct: 268 EAKTSLEVF-ASDAEFMNALADFIRDRQN 295
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 187/299 (62%), Gaps = 22/299 (7%)
Query: 7 RVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN L V ++ P+K+ E+M YSLLAGGKR+RP+L + +CE GGD +A+P ACA
Sbjct: 18 RVNARLANYVAPEIDSPSKLSESMAYSLLAGGKRLRPILVLLACEACGGDSDAALPAACA 77
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDDLP MD+DD+RRG+ TNHKV+GE AILAGDALL+LAFE +A +I
Sbjct: 78 IEMIHTYSLIHDDLPAMDDDDYRRGRLTNHKVYGEAMAILAGDALLTLAFEVMA---RDI 134
Query: 125 SPDRVVRAI-AELGSAVGSEGLVAGEIMDIDSE---------------GKDVSLNELENI 168
P V A A+L SA G G+V G++ D+++E G+ L +LE I
Sbjct: 135 QPGGVAAACCADLASAAGWCGMVGGQVADLEAEQQSADRQLGSATDNSGESAGLAQLEAI 194
Query: 169 HLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKT 228
H KT +LL +AV G + V R+ ++ + +GL FQ+ DD+LDVT + +LGK
Sbjct: 195 HRRKTGRLLMSAVTLGARVAQAKPELVNRLEEFGKRVGLAFQIADDLLDVTGDATKLGKN 254
Query: 229 AGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
GKD K TYP L+GI+ +R+ A DL+ +A L RAAPL LA ++ R H
Sbjct: 255 VGKDATLGKMTYPGLLGIDGSRRKADDLIDEACRLLEPLG-ERAAPLMELARFVTRRDH 312
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + ++M YSL AGGKR+RP+ +A EL + + V +E+IHT SL+HDDLP
Sbjct: 30 PVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPS 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRGKPTNHKV+GE A LAGDAL +LAF +A E++ ++ + + L A
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILA--RMEVTAEKRIELVQLLSVAA 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+EG+V G+++D++ E + + L ELE +H++KT LL ++ G ++ + + +++
Sbjct: 148 GAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKE 207
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA IGL FQ+ DDILD+ +++ELGKTAGKD+ SDK+TYP L+ + A++ + A
Sbjct: 208 YAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLNGAKEKLAEHYQHA 267
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L + A+ L A YI R++
Sbjct: 268 INALDQLPI-DASLLRDFAAYIVHRKN 293
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 173/287 (60%), Gaps = 4/287 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S+ KR++ L E +Q P + ++EAM YSL AGGKR+RPVL +A E G D +
Sbjct: 7 LESRKKRIDTRLAELLQTSTPEFSGLYEAMNYSLNAGGKRIRPVLFLAVLEAAGTDPDAF 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ +ACALE +H+ SL+HDDLP MDNDDFRRGKPTNHKV+G+ TA+LAGD LL+ AFE +A
Sbjct: 67 LDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMA 126
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A+S + ++++AI A G G+V G+ D+ SEG + +E +H KT +
Sbjct: 127 AQSAAPA-HKILQAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFT 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A V ++ G ++ + Y +GL FQ+ DDILDV S KE+GK G D + K
Sbjct: 186 AIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHKT 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY L+G+E AR+ A A+A L F+ A L L Y+ R
Sbjct: 246 TYVSLLGVEGAREEAKQTTARALAALQEFD-ENAEFLRQLVIYLEQR 291
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 182/283 (64%), Gaps = 6/283 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+++ +ALD++ P + AM YSL AGGKR+RP+L + SCE GGD+S+A+P ACA+
Sbjct: 21 RQLEEALDQSGDC--PPILKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALPAACAI 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EM+HT SL+HDDLP MD+D+ RRG PT+H FGE AILAGDALL+ AFE + A E+
Sbjct: 79 EMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRAFE-LLANQIEVK 137
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAVVCG 184
+ +L +A G+ G+V G++ D++SE ++ +L LE IH KT +L+ +A+ G
Sbjct: 138 SCAAACCV-DLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKRKTGRLICSALTMG 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
IGG + ++ + +Y CIGL FQ+ DD+LD+T +++GK KD K TYP L+
Sbjct: 197 ARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEKMGKGVRKDADHGKLTYPSLI 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+E +R+ + +L+ +A +A + L LA++I R H
Sbjct: 257 GVEESRRRSQNLIEEACLSIAPLG-SHGQRLEELAHFILERDH 298
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 177/282 (62%), Gaps = 5/282 (1%)
Query: 6 KRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K+++ L ++ L P ++ +AM YSL AGGKR+RP+L +A+ S VACA
Sbjct: 15 KQIDNRLPHIIENLNIPVQLRDAMIYSLKAGGKRIRPMLLLATLRGYNKPLSHGYDVACA 74
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ +F+ ++ S+ +
Sbjct: 75 IEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYSFQLIS--SSML 132
Query: 125 SPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
PD V + I ++ A G EG+V G+++D+ EG +S+++L+ IH HKT LL +V
Sbjct: 133 LPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQKIHHHKTGDLLAVSVES 192
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+ G + E + +A+ +G+ FQ+ DDILDV +GK G D +DK TYPKL
Sbjct: 193 GAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSDEENDKNTYPKL 252
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+G++ A++ +++A + L Y L +A YIA R
Sbjct: 253 LGLDGAKQKLAFHISEAKKYL-YETSIEHTLLEEMADYIAMR 293
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 169/272 (62%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
+ L + +KI ++MRYSL AGGKR+RP + + + D + VAC +EMIHT SL+
Sbjct: 23 NIDLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLI 82
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLP MDND RRGKPTNH V+G+ AILAGDALL+ A+E + V+A
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACE 142
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
E+ + G G++ G++ DI +E KD+S++ LE IH +KTAKL+ A++V + + +
Sbjct: 143 EISNCAGIYGMIGGQVSDIINENKDISVDNLEYIHENKTAKLIIASMVSAGYLANADETD 202
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+E +RKYA +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE +++
Sbjct: 203 MEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLN 262
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+ A +E++ + + LA YI +R+
Sbjct: 263 VYVNSAIDEISEIKDKDMSFFIELATYIGNRK 294
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 179/285 (62%), Gaps = 17/285 (5%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMPVACAL 65
++N+ LDE + ++ P +I+EAMRYS+LA G KR PV+CI++CEL GG +A P ACAL
Sbjct: 60 QINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACAL 119
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEI 124
EM+H SL+HDDLPCMD+ RRG+P+NH ++G D AILAGDAL L F H+ +++ +++
Sbjct: 120 EMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDL 179
Query: 125 SPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
P+ ++R IAE+ +VGS G+ AG+ +D++ N + I K ++ E++ VC
Sbjct: 180 VPESHLLRVIAEIARSVGSTGMAAGQFLDLEG-----GPNAVGFIQEKKFGEMGESSAVC 234
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA-TYPK 242
G + G E+ER+R+Y R +G+L+ VVDDI++ E K G +K +Y +
Sbjct: 235 GGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIE------ERLKVEGDGNRKNKGKSYAE 288
Query: 243 LMGIENARKFACDLLAQATEELAYFEV--ARAAPLYHLAYYIASR 285
+ G+E A + A +L A+A EEL FE R PLY Y R
Sbjct: 289 VYGVEKAIEKAEELRAKAKEELDGFEKHGERVLPLYSFVDYAFDR 333
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 167/284 (58%), Gaps = 3/284 (1%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+R + E + R PA++ EAM YSLLAGGKR+RP+LC+A E++G S +P+A A
Sbjct: 15 ERSLRTFCEEERRRIPARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAF 74
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK--STE 123
EM HT SL+HDDLPCMDND RRGKPTNH V+GE A+LAGDAL AFE A
Sbjct: 75 EMAHTASLIHDDLPCMDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNG 134
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
P R VRA+A A+G EG+ G+++D D + + + ++ KT L+ A++
Sbjct: 135 AEPQRCVRALALFAQALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCA 194
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+ G + + R+ KY +GL FQ+ DD+LD T S +GKT GKD DK T+ +
Sbjct: 195 GAILAGADGEALRRLMKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTFVRA 254
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G++ AR + A ++L F + A L LA Y+ R +
Sbjct: 255 YGLDGARALLHEKTLNAEKQLEPF-AEKGAFLRALAAYLEHRSN 297
>gi|363892252|ref|ZP_09319420.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402838806|ref|ZP_10887309.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
gi|361964202|gb|EHL17246.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402272366|gb|EJU21587.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
Length = 295
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 168/273 (61%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
+ L + +KI ++MRYSL AGGKR+RP + + + D + VAC +EMIHT SL+
Sbjct: 23 NINLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLI 82
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLP MDND RRGKPTNH V+G+ AILAGDALL+ A+E + V+A
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACE 142
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
E+ + G G++ G++ DI +E KD+S LE IH +KTAKL+ A++V + + +
Sbjct: 143 EISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADEND 202
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+E +RKYA +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE +++
Sbjct: 203 MEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLN 262
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ A +E++ + + LA YI +R++
Sbjct: 263 GYVNSAIDEISEIKDKDMSFFAQLATYIGNRKY 295
>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 289
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 180/274 (65%), Gaps = 5/274 (1%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPV 61
SK +R+ +A+ + Q + ++++++ YSL AGGKR+RP+L + E G + A V
Sbjct: 4 SKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQV 63
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A +E+IHT SL+HDDLP MDNDD+RRG+ TNHKV+ E TAILAGD+L F +A
Sbjct: 64 AACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--Q 121
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
++ + ++ + EL A G+ G+VAG+++D+ EG++++L +L+ IH +KT KLL
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
V +I G + + + +R+ + IGL FQV DDILDVT + +E+GKT KD++++K+TYP
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTTTFEEIGKTPQKDVLAEKSTYP 241
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPL 275
LMG+E ++ F D L QA EL +VA+ P
Sbjct: 242 ALMGLEASKVFLEDSLNQAINELD--QVAKQVPF 273
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 188/271 (69%), Gaps = 2/271 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P+ + E+M YSL AGGKR+RP+L +A G DE + +PV CA+EMIHT SL+HDD
Sbjct: 27 LQAPSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHK++GE TAILAGDALL+ +F+ + + +++S ++ +R + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
SA G+EG+V G+I+D+++E K VSL+EL+ IH KTAKLL +V+ G I+ + E+E
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKSVSLDELQRIHEGKTAKLLSFSVIAGAILADASEKEIE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++R+++ IG+ FQ+ DDILD+ S ++GK G D + K+TYP L+ +E A + +
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLLSLEGASQKLDEH 266
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +A + ++ + + +Y IA+R H
Sbjct: 267 IEKAKQLISELPLEKEL-MYEFCDMIAARDH 296
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 175/285 (61%), Gaps = 4/285 (1%)
Query: 6 KRVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KR+ L + VQ + P + +AMRY +L GGKR+RP L I SC L ++ VA
Sbjct: 17 KRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYSLNVA 76
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALE IH SL+HDDLP MDND RRG+PT H F E TAILAG+ALL+ AFE +A K++
Sbjct: 77 SALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTS 136
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
E+S + +R I L A G G++ G+++D+++E K ++ + KTA L+ A
Sbjct: 137 ELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLISFACQ 196
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIG + E++ + +GL FQ+ DD+LDVT S+K LGKTAGKD + KAT+ +
Sbjct: 197 AGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGKTAGKDETAHKATFIR 256
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GIE +K +L+AQA L F A+A PL A + A+R++
Sbjct: 257 LYGIEETQKKRDELIAQAEALLLPFG-AKATPLQQAARFSATRKN 300
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 171/267 (64%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + ++M YSL AGGKR+RP+ +A EL + + V +E+IHT SL+HDDLP
Sbjct: 30 PVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPS 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDDFRRGKPTNHKV+GE A LAGDAL +LAF +A +++ ++ + + L A
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILA--RMDVTAEKRIELVQLLSVAA 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+EG+V G+++D++ E + + L ELE +H++KT LL ++ G ++ + + +++
Sbjct: 148 GAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKE 207
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA IGL FQ+ DDILD+ +++ELGKTAGKD+ SDK+TYP L+ ++ A++ + A
Sbjct: 208 YAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLDGAKEKLAEHYQHA 267
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L + A+ L A YI R++
Sbjct: 268 INALDQLPI-DASLLRDFAAYIVHRKN 293
>gi|363893702|ref|ZP_09320797.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
gi|361963504|gb|EHL16576.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
Length = 295
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 168/273 (61%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
+ L + +KI ++MRYSL AGGKR+RP + + + D + VAC +EMIHT SL+
Sbjct: 23 NINLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVEKYLDVACVIEMIHTYSLI 82
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLP MDND RRGKPTNH V+G+ AILAGDALL+ A+E + V+A
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACE 142
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
E+ + G G++ G++ DI +E KD+S LE IH +KTAKL+ A++V + + +
Sbjct: 143 EISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADEND 202
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+E +RKYA +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE +++
Sbjct: 203 MEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLN 262
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ A +E++ + + LA YI +R++
Sbjct: 263 GYVNSAIDEISEIKDKDMSFFAQLATYIGNRKY 295
>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
gi|386578477|ref|YP_006074883.1| polyprenyl synthetase [Streptococcus suis GZ1]
gi|386580550|ref|YP_006076955.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|386582624|ref|YP_006079028.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|386588746|ref|YP_006085147.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|389857159|ref|YP_006359402.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|403062097|ref|YP_006650313.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|353734770|gb|AER15780.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|353740877|gb|AER21884.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|354985907|gb|AER44805.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|402809423|gb|AFR00915.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
Length = 289
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 181/276 (65%), Gaps = 5/276 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-M 59
+ SK +R+ +A+ + Q + ++++++ YSL AGGKR+RP+L + E G + A
Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
VA +E+IHT SL+HDDLP MDNDD+RRG+ TNHKV+ E TAILAGD+L F +A
Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA- 120
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
++ + ++ + EL A G+ G+VAG+++D+ EG++++L +L+ IH +KT KLL
Sbjct: 121 -QVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V +I G + + + +R+ + IGL FQV DDILDVT + +E+GKT KD++++K+T
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKST 239
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPL 275
YP LMG+E ++ F D L QA EL +VA+ P
Sbjct: 240 YPALMGLEASKVFLEDSLNQAINELD--QVAKQVPF 273
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 165/267 (61%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H AMRY++L GGKRVRP+L A+ L G D + +ACA+E+IH SLVHDDLPC
Sbjct: 32 PQRLHAAMRYAVLGGGKRVRPLLVHAAGRLAGADPARLDRIACAVELIHAYSLVHDDLPC 91
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL +LAF+ +A +P + IA LG A
Sbjct: 92 MDDDVLRRGKPTVHVEYDEATALLVGDALQALAFQVLADTPLAATPAVQLEMIALLGRAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ + GK ++ ELE +H+HKT L+ A+V+ G G E + +
Sbjct: 152 GSRGMAGGQAIDLGAVGKQLTREELEFMHIHKTGALIRASVLLGAQCGDALPAEQLAPLD 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
Y + +GLLFQVVDDILD + LGKTAGKD +K TY L+G+ AR + LLA
Sbjct: 212 HYGKVVGLLFQVVDDILDAQADTATLGKTAGKDADQNKPTYVTLLGMSEARTLSESLLAN 271
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A E L+ F A L LA +I R+
Sbjct: 272 AQEALSSFGPG-AVRLAELANFIVHRR 297
>gi|386586739|ref|YP_006083141.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
gi|353738885|gb|AER19893.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
Length = 289
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 181/276 (65%), Gaps = 5/276 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-M 59
+ SK +R+ +A+ + Q + ++++++ YSL AGGKR+RP+L + E G + A
Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
VA +E+IHT SL+HDDLP MDNDD+RRG+ TNHKV+ E TAILAGD+L F +A
Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA- 120
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
++ + ++ + EL A G+ G+VAG+++D+ EG++++L +L+ IH +KT KLL
Sbjct: 121 -QVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V +I G + + + +R+ + IGL FQV DDILDVT + +E+GKT KD++++K+T
Sbjct: 180 PFVAAGLIAGQSDVVISHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKST 239
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPL 275
YP LMG+E ++ F D L QA EL +VA+ P
Sbjct: 240 YPALMGLEASKVFLEDSLNQAINELD--QVAKQVPF 273
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 168/266 (63%), Gaps = 1/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + ++ +YS+ AGGKR+RP+L +A+ E +GG + +AMPVACA+EM+HT SL+HDDLP
Sbjct: 33 PDVLRQSAQYSIDAGGKRLRPILVLAAAEALGGRKEAAMPVACAIEMVHTYSLIHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEISPDRVVRAIAELGSA 139
MDNDD+RRGK TNHKV+GE AILAGDALL+ AF + A+ + ++V+ + EL
Sbjct: 93 MDNDDYRRGKLTNHKVYGEAMAILAGDALLTQAFYSASQARRHGVPAEQVLNIVEELAEY 152
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+ G+V G++ D+ E L+ LE IH HKT+ L+ ++ G I G + ++E +
Sbjct: 153 SGARGMVGGQVADMKGEQGITELSGLEYIHQHKTSDLIIFSLRAGGRIAGADDKQLEALT 212
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ R IGL FQ+ DDILDVT + ++LGK G D K TYP +G+E + + L +
Sbjct: 213 AFGRSIGLAFQIQDDILDVTGTQEKLGKAVGSDEKQQKVTYPFFIGMEESERRVALLTDE 272
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A +A + + L LA Y+ R
Sbjct: 273 AKTAIAGGVLPKPQRLLELADYLMKR 298
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 169/290 (58%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ S+AK + L+ +Q P ++ +AM YSL+AGGKRVRPVLC+A E+ G +
Sbjct: 9 LASRAKEIEDYLESCLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGACTKDIL 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P A LEMIHT SLVHDDLP MDNDD RRGKPT+HK FGE AILAGD LL+ AF +
Sbjct: 69 PFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQAFAMML- 127
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLE 178
T + V+ A + A G G+V G+ +D+ + G++ + L +L+ +H KT LL
Sbjct: 128 -KTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMKTGALLR 186
Query: 179 AAVVCGVIIGGG---NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
AA G I+ G N + Y IGL FQ+VDDILDVT K LGK G D
Sbjct: 187 AACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPVGSDESV 246
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K+TYP+ +G+E +R+ A +A L ++ LY LA YI R
Sbjct: 247 NKSTYPRFLGLEKSRELAQTAADEAKTCLRDYQGQGRDFLYRLAQYIVDR 296
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 TIAKAKDSISSLQL 280
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 TIAKAKDSISSLQL 280
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 157/241 (65%), Gaps = 1/241 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MDN
Sbjct: 31 LYESMNYSLMQGGKRIRPILSKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDN 90
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRG TNHKV+GE AILAGD LL+ AF+ + A T + ++ + AI + +A G E
Sbjct: 91 DDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTANKTATAQEK-LDAIQCVATAAGPE 149
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G + + KYA
Sbjct: 150 GMVGGQAFDMLSENKHIPLEELQVLHRGKTGALFNASVELGLILGNADTATRTALMKYAN 209
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G+E A++ A + QA
Sbjct: 210 CLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEGAKEQAASVGKQAHNA 269
Query: 264 L 264
L
Sbjct: 270 L 270
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 168/288 (58%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + R +AL V + PA + EAMRY++L GGKR+RP+L A+ E VGG ++ +
Sbjct: 37 MQERLVRTEEALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLR 96
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
CA+E+IH SLVHDD+PCMDND RRGKPT H FGE +A+LAGDAL +LAFE + +
Sbjct: 97 AGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPE 156
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
I R LG+A GS G+ G+ +D+ S GK +S +L +H KT LL +
Sbjct: 157 DDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMHRLKTGALLLGS 216
Query: 181 VVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V+ G + + + Y + +G+ FQVVDDILDV S LGKTAGKD +DK T
Sbjct: 217 VLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPT 276
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ L+G+E AR A +L QA L +A L LA + R H
Sbjct: 277 FVSLLGLEAARAHAEELRLQAHAALTRSGLADTQALAALADMVVQRTH 324
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|419820327|ref|ZP_14343938.1| geranyltranstransferase [Bacillus atrophaeus C89]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|388475479|gb|EIM12191.1| geranyltranstransferase [Bacillus atrophaeus C89]
Length = 296
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/274 (46%), Positives = 183/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RPV+ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TERLNMPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + +E +S D+ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+I D+++E K VSL ELE+IH KTAKLL +V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQIADMEAESKSVSLEELESIHERKTAKLLAFSVMAGAILADAPEN 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
E+E +R ++ IG+ FQ+ DDILD+ + +++GK G D +DK+TYP L+ ++ A+
Sbjct: 204 EIETLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTTNDKSTYPSLLSLDGAKNKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D + A + ++ + + LY L IA+R H
Sbjct: 264 ADHMKAAKDLISGLSLQKEL-LYDLCDLIAARDH 296
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 3/281 (1%)
Query: 7 RVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
RV L E V+ H P + E+M YSL AGGKR+RPVL A+ G DES + ACA+
Sbjct: 17 RVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDESMGLETACAV 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEI 124
EMIHT SL+HDDLP MD+DD RRGKPTNHKV+GE TAILAGDALL+ +F+ ++ A EI
Sbjct: 77 EMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEAAHPEI 136
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+ ++ I EL A G+EG+++G++ D++ E K ++L+ELE IHLHKT KLL V G
Sbjct: 137 TSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTGKLLGFCVKAG 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ ++ E + ++++ +GL FQ+ DDILDV S ++LGK G D ++K TYP L+
Sbjct: 197 AILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTENEKTTYPSLL 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G+E A++ + QA L ++ + L + YIA R
Sbjct: 257 GMEAAKEKLQYHVEQALLSLRQAQI-KHGLLEEICLYIAKR 296
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 167/262 (63%), Gaps = 2/262 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
+AMRYS+ AGGKR+RP++ IA+ L + +P ACALEMIHT SL+HDDLP MD+D+
Sbjct: 34 DAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYACALEMIHTYSLIHDDLPAMDDDN 93
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFE-HVAAKSTEISPDRVVRAIAELGSAVGSEG 144
+RRGK TNHKV+GE AILAGDALL+ AFE ++ T+ + + ++AI E+ A G G
Sbjct: 94 YRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQSNANVHLQAIEEIAKAAGMNG 153
Query: 145 LVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARC 204
++ G+++D++SE K V N L IH +KTA L+ +A G II ++ + +
Sbjct: 154 MIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFKVGAIIAEATETDIAHMNSLGKN 213
Query: 205 IGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEEL 264
IGL FQ+ DDILD+ K+LGK G D+ ++K+TYP L G++ + L + L
Sbjct: 214 IGLAFQIQDDILDIIGDEKKLGKDIGSDVENNKSTYPSLYGLQTSIDEVKRLTTNVDKVL 273
Query: 265 AYFEVARAAPLYHLAYYIASRQ 286
+ R+ L+ L++Y+ +R+
Sbjct: 274 NIYG-KRSRFLHDLSHYLVNRE 294
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 172/245 (70%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P+ + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPSVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 206 EKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLFNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAEA 270
>gi|395760864|ref|ZP_10441533.1| geranyltranstransferase [Janthinobacterium lividum PAMC 25724]
Length = 294
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 155/248 (62%), Gaps = 2/248 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P K+H AMRY+LL GGKRVRP+L +A+ EL D+ + ACALEMIH SLVHDD+PC
Sbjct: 29 PHKLHAAMRYALLGGGKRVRPLLVMAAGELFDADQDTLARAACALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + T I P R + + L A
Sbjct: 89 MDDDALRRGKPTVHIAYDEATALLVGDALQSQAF-MLLVDGTAIPPARQMAMLKLLAHAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+DS G ++L +LE +H KT LL AAV+ G + G EV +
Sbjct: 148 GSFGMCGGQAIDLDSVGLALTLPQLEQMHQLKTGALLRAAVMLGALAGKDLTSDEVTALN 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YAR +GL FQVVDD+LD T S LGKTAGKD ++K TY ++G+E +R A L
Sbjct: 208 AYARAVGLAFQVVDDVLDATADSATLGKTAGKDAAANKPTYVSILGLEPSRALAEKLRCD 267
Query: 260 ATEELAYF 267
A LA F
Sbjct: 268 AHAALAPF 275
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 3/281 (1%)
Query: 7 RVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
RV L E V+ H P + E+M YSL AGGKR+RPVL A+ G DES + ACA+
Sbjct: 17 RVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDESMGLETACAV 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEI 124
EMIHT SL+HDDLP MD+DD RRGKPTNHKV+GE TAILAGDALL+ +F+ ++ A EI
Sbjct: 77 EMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEAAHPEI 136
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+ ++ I EL A G+EG+++G++ D++ E K ++L+ELE IHLHKT KLL V G
Sbjct: 137 TSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTGKLLGFCVKAG 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ ++ E + ++++ +GL FQ+ DDILDV S ++LGK G D ++K TYP L+
Sbjct: 197 AILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTENEKTTYPSLL 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G+E A++ + QA L ++ + L + YIA R
Sbjct: 257 GMEAAKEKLQYHVEQALLSLRQAQI-KHGLLEEICLYIAKR 296
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 173/278 (62%), Gaps = 15/278 (5%)
Query: 13 DETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTM 71
DE ++++ P +I+EAMRYS LA G KR PV+CI++CEL GG +A P ACALEM+H
Sbjct: 1 DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60
Query: 72 SLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TEISPD-RV 129
SL+HDDLPCMD+ RRG+P+NH ++G D AILAGDAL L F+H+ + + +++ P+ RV
Sbjct: 61 SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 130 VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG 189
+R IAE+ VGS G+ AG+ +D+ V L I K ++ E + VCG ++ G
Sbjct: 121 LRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFGEMAECSAVCGGLLAG 175
Query: 190 GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA 249
E+ER+R+Y R +G+L+ +VDDIL+ + L KD + +Y ++ G+E A
Sbjct: 176 AEDDEIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRENSGKSYVEVYGVEKA 230
Query: 250 RKFACDLLAQATEELAYFEVA--RAAPLYHLAYYIASR 285
+ A +L A+A EEL FE + PLY Y R
Sbjct: 231 AEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDR 268
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 166/264 (62%), Gaps = 3/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDE-SSAMPVACALEMIHTMSLVHDDLPCMDND 84
E+M+YS+LAGGKR+RP+L + + ELV A+P A A+EMIHT SL+HDDLP MDND
Sbjct: 34 ESMKYSILAGGKRIRPILTLKAFELVSKSSFEKALPFASAIEMIHTYSLIHDDLPPMDND 93
Query: 85 DFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD--RVVRAIAELGSAVGS 142
DFRRGKPTNHKV+GE AILAGDALL+ A+E + E S D ++AI E+G A G
Sbjct: 94 DFRRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPETSKDVSGYIKAIKEIGKAAGV 153
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G++ G+++DI S+ +S +L IH KT+ L+EA+++ G + + ++ ++KY
Sbjct: 154 YGMIGGQVVDIISDENIMSEEQLRFIHNKKTSALIEASILSGAFLANASDNQIIALKKYG 213
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
IGL FQ+ DDILD +++LGK+ G D + K TY L G+E + + +L +A E
Sbjct: 214 EAIGLCFQIRDDILDKIGDNEKLGKSVGSDEANKKLTYLTLYGMEKSIEKTHELCKEAIE 273
Query: 263 ELAYFEVARAAPLYHLAYYIASRQ 286
L F+ A Y+ R+
Sbjct: 274 ALDIFDSKDTIFFKQFAEYLVYRE 297
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 159/267 (59%), Gaps = 9/267 (3%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ EAMRYSLLAGGKRVRP+LC+ S L G +P A A+E+IHT SL+HDDLP MD
Sbjct: 36 RLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAMD 95
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDAL----LSLAFEHVAAKSTEISPDRVVRAIAELGS 138
NDDFRRGKPT+HK FGE AILAGDA L+L +H E S ++V+ + EL
Sbjct: 96 NDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDH-----QEGSAEQVLAVVRELAH 150
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G GL G+ +D++ G+ ELE H HKT L+ A+ G I+ G +E +
Sbjct: 151 ATGLAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAI 210
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+YA +GL FQ+VDD+LD SS+ LGK AG D KAT+ + G+E AR+ A
Sbjct: 211 SRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACE 270
Query: 259 QATEELAYFEVARAAPLYHLAYYIASR 285
+A L E + L LA ++ R
Sbjct: 271 RALRALGRLEGRDTSRLEALALFVRDR 297
>gi|452124386|ref|ZP_21936970.1| geranyltranstransferase [Bordetella holmesii F627]
gi|452127781|ref|ZP_21940361.1| geranyltranstransferase [Bordetella holmesii H558]
gi|451923616|gb|EMD73757.1| geranyltranstransferase [Bordetella holmesii F627]
gi|451926650|gb|EMD76783.1| geranyltranstransferase [Bordetella holmesii H558]
Length = 303
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 167/264 (63%), Gaps = 10/264 (3%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG--- 52
+ +A + + L+E + PA++H+AMRY++L GGKRVR L A+ C + G
Sbjct: 12 LRDRADHIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQACPVSGNML 71
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
E+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL L
Sbjct: 72 AIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPL 131
Query: 113 AFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
AFE +A I+P VV+A LG A GS G+ G+ +D+ S GK +S +EL+ +H K
Sbjct: 132 AFELLA--GMPIAPALVVQATQVLGRAAGSLGMAGGQAIDLHSVGKTLSRDELQTMHSMK 189
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T LL A+V G I+ G + + + YA+ +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 190 TGALLAASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADSASLGKTAGKD 249
Query: 233 LVSDKATYPKLMGIENARKFACDL 256
V +K TY L+G++ AR+ A +L
Sbjct: 250 AVENKPTYVSLLGLDQARELAEEL 273
>gi|402815138|ref|ZP_10864731.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
gi|402507509|gb|EJW18031.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
Length = 307
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 174/289 (60%), Gaps = 4/289 (1%)
Query: 3 SKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+A+R+ L + ++ + P + ++M YSL+AGGKR+RP+ + +C+ + G+ +A P
Sbjct: 19 QQAERIESKLPKMLESQRIVPEPLTQSMLYSLMAGGKRLRPICVLMACDSLNGNTQAAEP 78
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VACA+EMIHT SLVHDDLP MDNDDFRRGKPTNHKVFGE AILAGD LL+ AF+ +
Sbjct: 79 VACAVEMIHTYSLVHDDLPAMDNDDFRRGKPTNHKVFGEAMAILAGDGLLTRAFQCIVQS 138
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ + + D + + EL G G+V G+ D+ E +L++LE IH+HKT+ L+
Sbjct: 139 TRKHGVPADVSLSIVEELAEFAGMSGMVGGQAADMLGEQGITTLDQLEYIHMHKTSDLIV 198
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
++ G I G + ++++ + Y +GL FQ+ DD+LD+ LGK G D+ S K
Sbjct: 199 FSLRSGGRIAGASELQLQALTTYGSKLGLAFQIQDDVLDIIGDETMLGKPKGSDVKSGKV 258
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP +G+E +++ L +A + + L +A Y+ R H
Sbjct: 259 TYPYFIGLEESKREVERLTEEAKSAIINAGFNKPELLLGMADYLMKRDH 307
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 TIAKAKDSISSLQL 280
>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
Length = 289
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 179/274 (65%), Gaps = 5/274 (1%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPV 61
SK +R+ + + + Q + ++++++ YSL AGGKR+RP+L + E G + A V
Sbjct: 4 SKLQRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQV 63
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A +E+IHT SL+HDDLP MDNDD+RRG+ TNHKV+ E TAILAGD+L F +A
Sbjct: 64 AACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--Q 121
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
++ + ++ + EL A G+ G+VAG+++D+ EG++++L +L+ IH +KT KLL
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
V +I G + + + +R+ + IGL FQV DDILDVT + +E+GKT KD++++K+TYP
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYP 241
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPL 275
LMG+E ++ F D L QA EL +VA+ P
Sbjct: 242 ALMGLEASKVFLEDSLNQAINELD--QVAKQVPF 273
>gi|417092358|ref|ZP_11957092.1| geranyltranstransferase [Streptococcus suis R61]
gi|353532927|gb|EHC02596.1| geranyltranstransferase [Streptococcus suis R61]
Length = 289
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 179/274 (65%), Gaps = 5/274 (1%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPV 61
SK +R+ + + + Q + ++++++ YSL AGGKR+RP+L + E G + A V
Sbjct: 4 SKLQRLEETMADFYQSQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQV 63
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A +E+IHT SL+HDDLP MDNDD+RRG+ TNHKV+ E TAILAGD+L F +A
Sbjct: 64 AACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--Q 121
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
++ + ++ + EL A G+ G+VAG+++D+ EG++++L +L+ IH +KT KLL
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
V +I G + + + +R+ + IGL FQV DDILDVT + +E+GKT KD++++K+TYP
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYP 241
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPL 275
LMG+E ++ F D L QA EL +VA+ P
Sbjct: 242 ALMGLEASKVFLEDSLNQAINELD--QVAKQVPF 273
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 168/270 (62%), Gaps = 5/270 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P I AM+YSL AGGKR+RP+L +C +GGD + P+ACA+EMIHT SL+HDDLP
Sbjct: 30 PDIIVSAMKYSLFAGGKRLRPILMKETCRCLGGDSADVKPLACAIEMIHTYSLIHDDLPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV---VRAIAELG 137
MDNDD RRGKPTNHKV+GE+ AILAGDALL+ A E A + P + RA++ L
Sbjct: 90 MDNDDLRRGKPTNHKVYGENMAILAGDALLNYAME-TAIAGIPVDPSKTFHYTRALSYLA 148
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
+ G G++ G+ DI SE + ++ ++ IH HKT LL+AAV+CG + E +
Sbjct: 149 HSSGVNGMIGGQTGDILSENEAINEEKMYYIHAHKTGALLKAAVLCGGFVAKVTGEERDA 208
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ Y+ IGL FQ+VDDILDVT K LGK G D + K+T+ L G+ ++++ +L
Sbjct: 209 LETYSEKIGLAFQIVDDILDVTGDEKTLGKPVGSDEKNHKSTFVSLYGMASSQEKIRELE 268
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
A + LA + + L +A YI R++
Sbjct: 269 NGALDALATID-HDTSFLEDMAKYICQREN 297
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 KIAKAKDSISSLQL 280
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 160/250 (64%), Gaps = 2/250 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P+K+HEAM YS L+GGKR+RP++ + + EL G +P AC +EMIHT SL+HDDLP
Sbjct: 30 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELGS 138
MDNDDFRRGKPT HK++G+ A+LAGDALL+ AF +A +K + I+PD VV I ++
Sbjct: 90 MDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSL 149
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G G++ G+ +DI + GKDVS + L I HKT L+ + G + G + ++E +
Sbjct: 150 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 209
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+ + +GL+FQ+VDDILD+ S LGK G D+ + K T+ L G + + +L
Sbjct: 210 KCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTFVNLFGFNKSVEIVNNLSL 269
Query: 259 QATEELAYFE 268
+A + ++ +
Sbjct: 270 EAKQLISNYN 279
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 KIAKAKDSISSLQL 280
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 178/254 (70%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEE 265
Query: 256 LLAQATEELAYFEV 269
+ +A + ++ ++
Sbjct: 266 TITKAKDAISSLQL 279
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRY +L GGKR+RP+L A+ E+VG A A+E+IH SLVHDDLPC
Sbjct: 30 PQRLHQAMRYVVLGGGKRIRPLLAFAAGEVVGAGPQCVDAAAAAVELIHAYSLVHDDLPC 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GD+L +LAF+ +A + +P + + L A
Sbjct: 90 MDDDSLRRGKPTCHHEYDEATALLVGDSLQTLAFQVLADRPLADAPAVQLEMMKILAVAA 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D +S GK +SL ELE +H+HKT L+ A+V G + G G E+E +
Sbjct: 150 GSRGMAGGQAIDGESVGKTLSLPELEFMHIHKTGALIRASVQLGALCGKGLENSEMEHLL 209
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA+CIGL FQVVDD+LD ++ LGKTAGKD ++K TY ++G AR FA DL
Sbjct: 210 HYAKCIGLAFQVVDDVLDAESNTATLGKTAGKDAEANKPTYVSILGANAARAFAADLHRD 269
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F ARA L +A +I RQ
Sbjct: 270 ALQSLEVFG-ARAERLRQIADFIVKRQ 295
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 TIAKAKDSISSLQL 280
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/245 (50%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L I+ A+ +
Sbjct: 206 EKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTIDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAEA 270
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 170/244 (69%), Gaps = 1/244 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G EG+V G++ D+D+EGK ++++ELE IH HKT KLLE AV+ G I+ + E
Sbjct: 147 AKAAGPEGMVGGQVADMDAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 257 LAQA 260
+A+A
Sbjct: 267 IAEA 270
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 160/250 (64%), Gaps = 2/250 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P+K+HEAM YS L+GGKR+RP++ + + EL G +P AC +EMIHT SL+HDDLP
Sbjct: 20 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 79
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELGS 138
MDNDDFRRGKPT HK++G+ A+LAGDALL+ AF +A +K + I+PD VV I ++
Sbjct: 80 MDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSL 139
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G G++ G+ +DI + GKDVS + L I HKT L+ + G + G + ++E +
Sbjct: 140 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 199
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+ + +GL+FQ+VDDILD+ S LGK G D+ + K T+ L G + + +L
Sbjct: 200 KCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTFVNLFGFNKSVEIVNNLSL 259
Query: 259 QATEELAYFE 268
+A + ++ +
Sbjct: 260 EAKQLISNYN 269
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEPKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQA 260
+A+A
Sbjct: 267 TIAKA 271
>gi|388567037|ref|ZP_10153476.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
gi|388265742|gb|EIK91293.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
Length = 327
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 172/278 (61%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +AL V PA + +AMRY++L GGKR+RP+L +A+CE VGG +AM AC++E+
Sbjct: 48 VEQALSRWVPSDAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGQADAAMRAACSVEL 107
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IH SLVHDD+PCMDND RRGKPT H FGE A+LAGDAL +LAFE + ++
Sbjct: 108 IHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFELLVPGDGSLADA 167
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R L A G++G+ G+ +D+ S G + L LE +H KT LL+A+V G
Sbjct: 168 MSARLCRLLALAAGADGMAGGQAVDLASVGIALDLAALEAMHRRKTGALLQASVTMGAAT 227
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
G + + +Y C+GL FQVVDDILDVT S LGKTAGKD +DK T+ LMG+
Sbjct: 228 GVVARDTLAALTEYGACVGLAFQVVDDILDVTADSSTLGKTAGKDAAADKPTFVSLMGLG 287
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
A+ +A ++LA+A L + R L+ LA ++A R
Sbjct: 288 PAQAYADNVLARAHAALGRSGLERPGTLHALADWVAQR 325
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 169/264 (64%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +AM YSL+AGGKR+RPVL +A+ + VG D + + VACALEMIHT SL+HDDLP MDN
Sbjct: 30 LRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKVFG+ AILAGD LL+LAF V + +S D ++R + E+ A G+E
Sbjct: 90 DDYRRGKLTNHKVFGDGIAILAGDGLLTLAFT-VILRQQNVSADTLLRVVDEISRAAGAE 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ +E +S+ E+ +H+ KT L AA+ G I+GG + ++ + YA
Sbjct: 149 GMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLAALTTYAE 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+ DDILDV +++ +GK G D + K+TY L ++ A++ A + A
Sbjct: 209 QFGLAFQITDDILDVIGTAENIGKPVGSDEKNHKSTYVSLTSLDEAQELAAQTVKDACTA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L F V A L L Y+ R+
Sbjct: 269 LRDFGV-EADFLRELVSYLVYRKQ 291
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 162/248 (65%), Gaps = 2/248 (0%)
Query: 40 RPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGE 99
RP+LC+ S EL + + ACALE++HT +L+HDDLPCMDNDDFRRGKPT HK F E
Sbjct: 1 RPILCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDFRRGKPTCHKAFPE 60
Query: 100 DTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD 159
A+LAGDALL+L F+ + A +T+ P++ +R I++L GS+G++ G+++DI +E K
Sbjct: 61 SIALLAGDALLTLCFQ-IIADNTKNCPEKGIRIISDLAELTGSKGVIGGQVLDIINENKP 119
Query: 160 VSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVT 219
++ EL IH++KTAKL+ A+V G I+ E+E + KY IG FQ+ DDILD
Sbjct: 120 ITPEELSEIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIGEAFQIADDILDEI 179
Query: 220 KSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLA 279
S +LGK G+DL +K+T+PK GI+ +++ D + A L F +A L +A
Sbjct: 180 GDSAKLGKNTGQDLKLNKSTFPKFFGIDKSKQILFDKINSAVACLNQFG-KKAESLNQIA 238
Query: 280 YYIASRQH 287
++I +R++
Sbjct: 239 HFIGTREN 246
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 206 EKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAEA 270
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRFRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 KIAKAKDSISSLQL 280
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 175/288 (60%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDE--TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M K +N+ L+E T + + +AM YSL+AGGKR+RP+L +A+ + +G D
Sbjct: 6 MQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKF 65
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ++ ++E IHT SL+HDDLP MDNDD+RRGK TNHKVFGE AILAGDALL++AFE +
Sbjct: 66 LRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFE-II 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A + + V+ I E+ A G+EG+V G+++D+ SE K + + L+ +H KT L
Sbjct: 125 ATDKNVDAETKVKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFC 184
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA+ G I+ G + ++ + +YAR GL FQ+ DD+LDV K +GK G D + K+
Sbjct: 185 AAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDVLDVVGDEKTIGKPVGSDEKNHKS 244
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TY L +E+A+ A + + +A L F A L L Y+ +R
Sbjct: 245 TYVTLGSLESAKALAQEAVDKAKASLVDFG-ENAEFLRALVDYLITRN 291
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 171/244 (70%), Gaps = 1/244 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A++ +
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKEILEET 266
Query: 257 LAQA 260
+A+A
Sbjct: 267 IAEA 270
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 KIAKAKDSISSLQL 280
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQA 260
+A+A
Sbjct: 267 KIAKA 271
>gi|384044955|ref|YP_005492972.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
gi|345442646|gb|AEN87663.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
Length = 298
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 183/281 (65%), Gaps = 3/281 (1%)
Query: 7 RVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
RV L E V+ H P + E+M YSL AGGKR+RPVL A+ G DES + ACA+
Sbjct: 17 RVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDESMGLETACAV 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEI 124
EMIHT SL+HDDLP MD+DD RRGKPTNHKV+GE TAILAGDALL+ +F+ ++ A EI
Sbjct: 77 EMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEAAHPEI 136
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+ ++ I EL A G+EG+++G++ D++ E K ++L+ELE IHLHKT KLL V G
Sbjct: 137 TSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTGKLLGFCVKAG 196
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I+ ++ + + ++++ +GL FQ+ DDILDV S ++LGK G D ++K TYP L+
Sbjct: 197 AILAKATPLQQKLLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTENEKTTYPSLL 256
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G+E A++ + QA L ++ + L + YIA R
Sbjct: 257 GMEAAKEKLQYHVEQALLSLRQAQI-KHGLLEEICLYIAKR 296
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 173/269 (64%), Gaps = 6/269 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + E+MRYS L GGKR+RPVL + + E G D AMP A ALEMIH SL+HDDLP
Sbjct: 54 PPSLFESMRYSALGGGKRLRPVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPA 113
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRA-IAELGSA 139
MD+DD RRG+PTNH V+GE TAILAGD LL+ AFE +A TEIS + A +A+L SA
Sbjct: 114 MDDDDLRRGRPTNHIVYGEATAILAGDGLLTRAFEVLA---TEISNKELALACVADLASA 170
Query: 140 VGSEGLVAGEIMDIDSEGKDV-SLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G+ D+ +E V +L ELE IH KT +LL A+ G +GG ++ ++E +
Sbjct: 171 AGWCGMVGGQAADLAAETTPVTTLAELEQIHHRKTGRLLACALTMGGRLGGASVQQLESL 230
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+Y IGL FQ+ DD+LDV SS++LGK KD + KATYP +G+E +R+ A DL+
Sbjct: 231 ARYGFAIGLAFQIADDLLDVEGSSEKLGKQTQKDAQAGKATYPGFLGVEASRERAADLVK 290
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
QA EL F R L LA YI R H
Sbjct: 291 QACRELEVFG-PRGQWLSDLALYIIERDH 318
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 168/266 (63%), Gaps = 2/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRY++L GGKRVRP+L A+ L G +ACA+E+IH SLVHDDLPC
Sbjct: 36 PHRLHEAMRYAVLGGGKRVRPLLAHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPC 95
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H F E TA+LAGDAL +LAF+ +A + P + + +L A
Sbjct: 96 MDDDVLRRGKPTVHVEFDEATALLAGDALQTLAFQVLAERPLGTDPANQLAMLNQLAIAS 155
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ S GK + ELE +H+HKT L+ AAV+ G GG E R+
Sbjct: 156 GSRGMAGGQAIDLASVGKRLGREELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLD 215
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA+ +GLLFQVVDD+LD + LGKTAGKD +DK TY L+G+ +AR+ A ++L +
Sbjct: 216 HYAKVVGLLFQVVDDLLDAEADTATLGKTAGKDADNDKPTYVSLLGLVDARRLAEEMLDE 275
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA YI R
Sbjct: 276 ARASLRPFG-ARALRLEQLADYIVHR 300
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 206 EKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAEA 270
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 178/254 (70%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 173/264 (65%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ EAM YSL+AGGKR+RP+L +A+ + VG D + + ACALEMIHT SL+HDDLP MDN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGADGTKLLTAACALEMIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKV+G+ AILAGDALL+LAF V + ++ ++R + + A G+E
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAASLLRVVDVISRAAGAE 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ +E K +SL+EL +H+ KT L AA+ G I+GG + ++ + YA
Sbjct: 149 GMVGGQVLDLQAENKAISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYAD 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+ DDILDV +++++GK G D + K+TY L + A++ A + +A
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELAQRTVDEALAA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
LA F + A+ L L Y+ +R+
Sbjct: 269 LAVFG-SEASFLRELVSYLVNRKQ 291
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 176/293 (60%), Gaps = 11/293 (3%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG--- 52
+ +A+ + LD+ + P+++HEAMRY++L GGKRVR L A+ C + G
Sbjct: 12 LQGRARHIEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVL 71
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
E+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL L
Sbjct: 72 AIEASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPL 131
Query: 113 AFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
AFE +A S I+P +V+A L A GS+G+ G+ +D+ S G+ +S +EL+ +H K
Sbjct: 132 AFELLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQMMHGMK 189
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T +L +V G I+ G + + + YA+ +GL FQVVDDILDVT S LGKT GKD
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTPGKD 249
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G+ AR FA +L A + LA A A L LA +I R
Sbjct: 250 AAENKPTYVSLLGLSEARAFAGELREAALDALAPLGDA-GARLAQLADFIVLR 301
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 185/272 (68%), Gaps = 2/272 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P+ + ++M YSL AGGKR+RP+L +A G E +PV CA+EMIHT SL+HD
Sbjct: 26 KLQAPSTLKQSMLYSLEAGGKRLRPILVLALLHAYGKKEEDGIPVGCAVEMIHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHK++GE TA+LAGDALL+ +F+ + S E+ ++ +R + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESFKMITTHVSAEVPAEKRLRLVNE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L SA G+EG+V G+I+D+++E K VSL EL++IH KTAKLL +V+ G I+ E+
Sbjct: 146 LISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGKTAKLLSFSVIAGAILADAPEEEI 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++R+++ IG+ FQ+ DDILD+ S ++GK G D + K+TYP L+ +E A++ +
Sbjct: 206 EKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDTSNGKSTYPSLLSLEGAKQKLDE 265
Query: 256 LLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +A + ++ + + LY L IA R H
Sbjct: 266 HIKKAKQLISELSLEQDL-LYELCDMIADRDH 296
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 167/288 (57%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + R AL V + PA + EAMRY++L GGKR+RP+L A+ E VGG ++ +
Sbjct: 22 MQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLR 81
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
CA+E+IH SLVHDD+PCMDND RRGKPT H FGE +A+LAGDAL +LAFE + +
Sbjct: 82 AGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPE 141
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
I + LG+A GS+G+ G+ +D+ S GK +S +L +H KT LL +
Sbjct: 142 DDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLKTGALLLGS 201
Query: 181 VVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V+ G + + + Y + +G+ FQVVDDILDV S LGKTAGKD +DK T
Sbjct: 202 VLMGAACNAQTDVRALAALTVYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPT 261
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ L+G+E AR A L QA L +A L LA + R H
Sbjct: 262 FVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 309
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 14/236 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N+ LDE + ++HPA I+EAMRYS+LA G KR PV+C+A+CEL GGD +A
Sbjct: 51 WTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAF 110
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRGKP+NH V+G AILAGDAL LAF+H+ +
Sbjct: 111 PTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVS 170
Query: 120 KSTEISPDRVVRA-----IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
+ PD V RA I E+ VGS G+ AG+ +D+ EG L+ ++ K
Sbjct: 171 HT---PPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLSFVQE---KKFG 222
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
+ E + VCG ++GG E++ +R+Y R +G+L+QVVDDI + K S + G G
Sbjct: 223 AMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 167/288 (57%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + R AL V + PA + EAMRY++L GGKR+RP+L A+ E VGG ++ +
Sbjct: 26 MQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLR 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
CA+E+IH SLVHDD+PCMDND RRGKPT H FGE +A+LAGDAL +LAFE + +
Sbjct: 86 AGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPE 145
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
I + LG+A GS+G+ G+ +D+ S GK +S +L +H KT LL +
Sbjct: 146 DDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLKTGALLLGS 205
Query: 181 VVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V+ G + + + Y + +G+ FQVVDDILDV S LGKTAGKD +DK T
Sbjct: 206 VLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPT 265
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ L+G+E AR A L QA L +A L LA + R H
Sbjct: 266 FVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 313
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 170/244 (69%), Gaps = 1/244 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKAILEET 266
Query: 257 LAQA 260
+A+A
Sbjct: 267 IAEA 270
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 171/288 (59%), Gaps = 14/288 (4%)
Query: 7 RVNKALDETVQLRHPA-----KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
+VN+ L+ HPA ++ EAMRYSL+ GGKR+RP L A+ V + +
Sbjct: 15 QVNRCLEGWT---HPADAVAPRVTEAMRYSLMNGGKRIRPTLVYAAARAVSVPNEATLAG 71
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A A+E IH SL+HDDLP MDNDD RRGKPT H F E TAILAGD L +LAFE + S
Sbjct: 72 AGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILAGDGLQTLAFEKL---S 128
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHLHKTAKLLEA 179
T P V I L A G +G+VAG+++D++SEG + +++ LE IH HKT L+ A
Sbjct: 129 TIEDPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTISHLEKIHRHKTGALIRA 188
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AV+ G + + + + +YA IGL FQV DDILDV + LGK G DL +KAT
Sbjct: 189 AVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTATLGKRQGADLEHEKAT 248
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
Y L+G+ AR+ A DL A A L F + A PL +A YI +R H
Sbjct: 249 YVSLLGLREAREKARDLHATALSSLQSF-ASSADPLRWVADYIVTRSH 295
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 14/236 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N+ LDE + ++HPA I+EAMRYS+LA G KR PV+C+A+CEL GGD +A
Sbjct: 51 WTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAF 110
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRGKP+NH V+G AILAGDAL LAF+H+ +
Sbjct: 111 PTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVS 170
Query: 120 KSTEISPDRVVRA-----IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
+ PD V RA I E+ VGS G+ AG+ +D+ EG L+ ++ K
Sbjct: 171 HT---PPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLSFVQE---KKFG 222
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
+ E + VCG ++GG E++ +R+Y R +G+L+QVVDDI + K S + G G
Sbjct: 223 AMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 168/262 (64%), Gaps = 4/262 (1%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
+R+N L + + L P+ + EAMRY +L GGKR+RP L A+ ++G D A
Sbjct: 24 ERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGRMLGADLIQLDYAAAG 83
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LE IH SL+HDDLP MDND RRG+PT H F E TAILAGDAL + AFE + ++ +
Sbjct: 84 LEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAFAFE-ILTQAPAL 142
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S ++ + ++ L A G++G+ G+ +D+ SE K +SL ELE IH +KT LL AA+ G
Sbjct: 143 SAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNKTGALLTAALQLG 202
Query: 185 VIIGG--GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
I G+ +++++Y+R IGL FQV DDILD+ S+ LGKT G DL++DK+TYPK
Sbjct: 203 FICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKTVGSDLMADKSTYPK 262
Query: 243 LMGIENARKFACDLLAQATEEL 264
L+G++ A++ A +L +A L
Sbjct: 263 LLGLDGAKQKAQELYREAISTL 284
>gi|403668188|ref|ZP_10933465.1| geranyltranstransferase [Kurthia sp. JC8E]
Length = 293
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 164/248 (66%), Gaps = 3/248 (1%)
Query: 4 KAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
K + V L E++Q P + EAM YSL AGGKRVRP+ +A + + A V
Sbjct: 14 KIEDVMLTLVESIQ--APEILKEAMSYSLKAGGKRVRPLFVLAVMDHLAEITEEAYIVGA 71
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+EMIHT SL+HDDLP MDNDD+RRGK TNHKVFGE A LAGDAL +L F + A+
Sbjct: 72 AVEMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEAYATLAGDALNTLPF-GIIARMQN 130
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
++ ++ V + L G+EG+V G+I+DI+ E K ++++EL ++H++KT +L ++
Sbjct: 131 VTAEQKVALVQLLSETAGAEGMVGGQILDIEGETKQLTIDELVHVHVNKTGAILRFSIEA 190
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+ ++ +R YA IGL FQ+ DDILD+ ++++LGKTAGKD+ SDK+TYP L
Sbjct: 191 GAILANATEEQLAILRDYAYHIGLAFQIKDDILDIEGTTEQLGKTAGKDVASDKSTYPAL 250
Query: 244 MGIENARK 251
+ +E A++
Sbjct: 251 LTLEGAKE 258
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 180/294 (61%), Gaps = 15/294 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPA----KIHEAMRYSLLAGGKRVRPVLCIASCELVG-GDE 55
+ ++ RV L+E V P+ ++ EAMRYSLLAGGKR+RPVLC+A +LV G
Sbjct: 10 LAAQQARVEALLNERVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFADLVARGSA 69
Query: 56 SSAMP--VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA 113
SA+ ACALE +HT SLVHDDLP MDNDD+RRG+ TNHKV+GE AILAGDALL+ A
Sbjct: 70 VSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAGDALLTEA 129
Query: 114 FEHVAAKSTEISPDRVVRAIA-ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
F VA+ P+ + A+ EL A G+ G+V G+++D +E + +L+ L +H K
Sbjct: 130 FTLVAS-----GPESMRAALCRELAVASGAAGMVGGQVLDT-AEDRPSALDYLIRMHRMK 183
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T L+ AA GV+ GG+ + R Y +GL FQ+ DD+LDVT ++ ELGK AG D
Sbjct: 184 TGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAAELGKPAGAD 243
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+ + T+P ++G+E +R A +A+A + E PL LA Y R+
Sbjct: 244 AAAGRFTFPAVVGLEASRTLADQKVAEAIAAVRPLE-GEDGPLAALARYTVERK 296
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 178/254 (70%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEM+HT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 174/292 (59%), Gaps = 10/292 (3%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL++ + PA++HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLDRVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ALEMIH SLVHDD+PCMD+D+ RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 DAASAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF--VA 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTSDVLAPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLR 184
Query: 179 AAVVCGVII-----GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
AAV G + GG + ++ + Y+ +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 185 AAVRMGALTGQIENGGPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 244
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G++ +R A L + A + LA F ARA L LA + +R
Sbjct: 245 KDGKPTYVSIIGLDASRALAAQLRSDAHQALAPFG-ARAQRLAELADLVVNR 295
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 170/244 (69%), Gaps = 1/244 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 257 LAQA 260
+A+A
Sbjct: 267 IAEA 270
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 175/269 (65%), Gaps = 2/269 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H +M YSL+AGGKR+RP+L IA+CE GG +A+PVACA+EM+HT SL+HDDLP
Sbjct: 33 PETLHRSMTYSLMAGGKRLRPLLVIAACEAAGGSREAALPVACAVEMVHTYSLIHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGS 138
MD+DDFRRGKPTNHKVFGE AILAGDALL+ AF + S + I DRV+ + +L
Sbjct: 93 MDDDDFRRGKPTNHKVFGEAAAILAGDALLTHAFYSIVQSSRKHGIPADRVLSIVEDLAE 152
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G++ D++ E SL +LE IHLHKT+ L+ +++ G + G + +++ +
Sbjct: 153 YAGPRGMVGGQVADMEGEQGLTSLEQLEYIHLHKTSDLIMFSLMAGGRVAGCSEAQIDSL 212
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
R + + IGL FQ+ DDILD+ +LGK D+ +K TYP +G+E +++ L A
Sbjct: 213 RSFGKHIGLAFQIQDDILDLIGDEAKLGKPTQSDVKQEKVTYPFFIGLEASKREVERLTA 272
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A ++ + L+ +A ++ +R H
Sbjct: 273 EAKSAISEGNFPDPSRLHEIADFLLARDH 301
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDTA-AEPLRQLARYIVERRH 295
>gi|445494922|ref|ZP_21461966.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
gi|444791083|gb|ELX12630.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
Length = 296
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 164/267 (61%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PAK+H+AMRY+LL GGKRVRP+L A+ L G D + A A+EMIH SLVHDD+PC
Sbjct: 31 PAKLHDAMRYALLGGGKRVRPLLVYAAGALFGADAAILSRAAAAVEMIHAYSLVHDDMPC 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D+ RRGKPT H + E TA+L GDAL S AF V +++ I R V + L A
Sbjct: 91 MDDDELRRGKPTVHVAYDEATALLVGDALQSQAF-LVLSEADSIPAARQVAMLRLLAHAS 149
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+DS G ++L +LE +H KT LL AAVV G + G E++ +
Sbjct: 150 GSAGMCGGQAIDLDSVGLSLTLEQLEQMHQLKTGALLRAAVVLGALAGKDLEAAELQALN 209
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YAR IGL FQVVDD+LD T S LGKTAGKD +K TY ++G+E +R A L
Sbjct: 210 DYARAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEPSRALAQKLRLD 269
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A LA F +A L LA I R+
Sbjct: 270 AHAALAPFG-EKALRLRELADLIVQRK 295
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRG+PTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGQPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK +++NELE IH HKT KLLE AV+ G I+ +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 KIAKAKDSISSLQL 280
>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
Length = 292
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 166/266 (62%), Gaps = 3/266 (1%)
Query: 1 MTSKAKRVNKALDE--TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S + + + L E T R ++E+M YSL+ GGKR+RP+L A E++ D +
Sbjct: 6 LASSKQHIEQWLGEVLTSPNREFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHKDPADY 65
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
CA+E IHT SLVHDDLP MDNDD+RRG TNHKV+GE AILAGD LL+ AF+ +
Sbjct: 66 KEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGLLTYAFQLMT 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A T + ++ + AI + +A G EG+V G+ D+ SE K + L EL+ +H KT L
Sbjct: 126 ANETATAQEK-LDAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLHRGKTGALFN 184
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V G+I+G + + +YA C+GLLFQ+ DDILDVT + +ELGKT G D+ K+
Sbjct: 185 ASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKS 244
Query: 239 TYPKLMGIENARKFACDLLAQATEEL 264
TY L+G++ A+ A + QA + L
Sbjct: 245 TYVSLLGLDEAKNQASLVGKQAHDAL 270
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MD
Sbjct: 30 QLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+GE AILAGD LL+ AF+ + +T S + + AI + +A G
Sbjct: 90 NDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQ-LMTSNTVASAQQKLDAIKCVATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G N + +Y+
Sbjct: 149 EGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANKTTRTALMEYS 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G+E A+ A + +QA +
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKHQAYLVGSQAHD 268
Query: 263 EL 264
L
Sbjct: 269 AL 270
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MD
Sbjct: 30 QLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+GE AILAGD LL+ AF+ + +T S + + AI + +A G
Sbjct: 90 NDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQ-LMTSNTVASAQQKLDAIKCVATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G N + +Y+
Sbjct: 149 EGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTALMEYS 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G+E A+ A + +QA +
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKHQAYLVGSQAHD 268
Query: 263 EL 264
L
Sbjct: 269 AL 270
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 172/265 (64%), Gaps = 2/265 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ +M YSL+AGGKR+RP+L +A+ + VG D + + ACALEMIHT SL+HDDLP MD
Sbjct: 33 KLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMD 92
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHK + E TAILAGDALL+LAF + + ++ +R++R + E+ A G+
Sbjct: 93 NDDYRRGKLTNHKAYDEGTAILAGDALLTLAFTMI-LRQQDVPAERLLRVVDEMSRAAGA 151
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+++D+++E + +S+ EL +H+ KT L AA+ G I+ G + ++ + YA
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRSGAILAGASEQQLAALTAYA 211
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DDILDV +++++GK G D + K+TY L ++ A+ A + +A +
Sbjct: 212 DHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVERAVD 271
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L F AA L L Y+ R+
Sbjct: 272 ALHIFG-DEAAFLRELVLYLVRRKQ 295
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 176/289 (60%), Gaps = 7/289 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + PAK+HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VA 124
Query: 119 AKSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
E +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTDAEALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALL 184
Query: 178 EAAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +D
Sbjct: 185 RAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAAND 244
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G+E +R+ A L A+A + L F ARA L LA + +R
Sbjct: 245 KPTYVSILGLEASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 169/263 (64%), Gaps = 3/263 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
+AMRYSL AGGKR+RP+LCIA E VGG +PVACA+E+IHT SL+HDDLP MD+DD
Sbjct: 40 KAMRYSLFAGGKRLRPILCIAGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDD 99
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFE-HVAAKSTE-ISPDRVVRAIAELGSAVGSE 143
RRGKPTNHKVFGE A+LAGD LL+ AF + K+TE I P ++ I + A G E
Sbjct: 100 LRRGKPTNHKVFGEAIALLAGDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCE 159
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++DI EGK+ ++ +H HKT ++ A+V+ G I G V+ Y
Sbjct: 160 GMVGGQVVDILWEGKNAEFETVKFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGH 219
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IGL FQ+ DDILDV S+ +GK AG D K TYP ++G++ ++K L+ A ++
Sbjct: 220 KIGLAFQISDDILDVEGDSEIMGKMAGADEGKGKTTYPSVLGMDESKKIQEALVRDAVQD 279
Query: 264 LAYFEVARAAPLYHLAYYIASRQ 286
L F A A PL +AYYI R+
Sbjct: 280 LEVFGDA-AEPLRKIAYYIIERK 301
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVFE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK ++++ELE IH HKT KLLE AV+ G II +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTISELEYIHKHKTGKLLEFAVLAGAIISDATEEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV +E+GK G D ++K+TY L ++ A+ +
Sbjct: 207 EKLLAFAKYIGLAFQIRDDILDVEGIEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEE 266
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 267 TIAKAKDSISSLQL 280
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 172/268 (64%), Gaps = 2/268 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L P + EAM YSL AGGKR+RPVL A+ G D M A ALEMIHT SL+HDD
Sbjct: 28 LDSPPVLKEAMDYSLQAGGKRIRPVLLFAAINSFGKDPERGMDAAAALEMIHTYSLIHDD 87
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
LP MD+DD RRGKPTNHKV+GE AILAGDALL+ AF+ + A+S ++S V I +L
Sbjct: 88 LPSMDDDDLRRGKPTNHKVYGEANAILAGDALLTYAFQ-IIAQSPDLSEKEKVAIIEQLA 146
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G EG+VAG++ D++ E K ++L ELE +H +KT +L+ +V G +IGG E+
Sbjct: 147 KAAGPEGMVAGQVADMEGEKKALTLEELEAVHRNKTGRLIAFSVRAGALIGGATEAELAV 206
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
KYA IG+ FQ+ DDILD+ S ++LGK G D+ + K TYP L+ + AR+ + +
Sbjct: 207 FEKYAYHIGIAFQIQDDILDIVGSEEKLGKRVGSDIANHKNTYPALLTVRGAREKLKEHV 266
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASR 285
QA EEL ++ A L +A IA+R
Sbjct: 267 DQAIEELNRLDI-ETALLKDIALMIATR 293
>gi|340750026|ref|ZP_08686873.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|340562527|gb|EEO34717.2| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 295
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 173/282 (61%), Gaps = 2/282 (0%)
Query: 6 KRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K V +D+ + +L +P I E M+Y++L GGKR+RP+L + +++G + + A A
Sbjct: 12 KLVEDGIDKYLGELTYPEVIAEGMKYAVLNGGKRLRPILLFMTLDILGCEREKGLATASA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIH+ SLVHDDLP +DNDD+RRGK T HK FGE IL GDALL+ AF + K++ +
Sbjct: 72 IEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYVLTEKNSHL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S +++V + S G G++ G+++DI SEGK + L L +H HKT KL++ V
Sbjct: 132 SAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMHAHKTGKLIKLPVEVA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
+I ++ + E + KY+ IGL FQ+ DDILD+ + +GK G DL DK+TYP ++
Sbjct: 192 CVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFETIGKPVGSDLEHDKSTYPSIL 251
Query: 245 GIENARKFACDLLAQATEEL-AYFEVARAAPLYHLAYYIASR 285
G+ ++K + + +A + A F R+ L LA YI +R
Sbjct: 252 GMAESKKLLSETIEEAKSIIRARFGEERSKTLLDLADYIGNR 293
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 172/245 (70%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G +++ + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGIGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAKA 270
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 172/267 (64%), Gaps = 3/267 (1%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
A+++EAM Y +L GGKRVRP+L +A+ E +GGD A+P CA+E+IH SLVHDDLP M
Sbjct: 35 ARLNEAMGYCVLNGGKRVRPLLLLATTEALGGDLQQALPACCAVELIHAYSLVHDDLPAM 94
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D+D RRGKPT H + E TAIL GD L +LAF + +S+ S + V++ + EL A G
Sbjct: 95 DDDSLRRGKPTCHIAYDEATAILVGDGLQTLAFSAL-TESSGASAESVLQMVRELARASG 153
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVRK 200
+G+V G+ +DI SEG + L ELE +HL KT L+EA++V G + G E +E +R+
Sbjct: 154 HQGMVGGQAIDIYSEGHTLKLEELERMHLEKTGALIEASIVLGALASGRADAECIEGLRR 213
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
+AR IGL FQV DDI+DV + LGKTAGKD +K TY L+G+E A+ A L +A
Sbjct: 214 FARAIGLAFQVRDDIIDVESDTSVLGKTAGKDAERNKPTYTSLLGLEQAKLKALQLHNEA 273
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
+L + + + L LA ++ R H
Sbjct: 274 LSQLQALGL-QNSRLQDLASFMIERTH 299
>gi|389774289|ref|ZP_10192408.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
gi|388437888|gb|EIL94643.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
Length = 302
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 179/288 (62%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S +R +ALD + PA++H AMRY++L+GGKR+RP+L A+ + +G D ++
Sbjct: 14 LQSLIQRAEQALDRHLPSAGHSPAELHRAMRYAVLSGGKRLRPLLVYAAAQALGHDSATL 73
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
ACA+E+IH SLVHDDLP MD+D RRG+PT H VFGE AILAGDAL +LAFE +A
Sbjct: 74 DAPACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHIVFGEAMAILAGDALQALAFEILA 133
Query: 119 AKST-EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ ++ + + LG A G+EG+ G+ +D+ + G+ + L++LE++H KT L+
Sbjct: 134 DDAARQVEAATGIAMLRALGRACGAEGMAGGQALDLAAVGRHLGLDQLEHMHACKTGALI 193
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
A+V G + G + ++ + +YA +GL FQV DDILDV S +GKTAGKD +DK
Sbjct: 194 RASVQLGALAAGADDGMLQSLDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAAADK 253
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
T+P ++G++ +R +L QA +A R L LA Y A R
Sbjct: 254 PTFPSIIGLDASRARLAELTEQALAAIAPLGT-RGELLRELALYSALR 300
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 1/247 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + +AM YSL AGGKR+RP+L A+ G + + ACALEMIHT SL+HD
Sbjct: 27 ELQCPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V+A + E IS + +R E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIKLRLALE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK ++LNELE IH HKT +LLE AV+ G I+ G E
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEFAVLAGAILAGATKEEE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ +GL FQ+ DDILDV + +E+GK G D ++K+TY L I+ A+ +
Sbjct: 207 EKLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFAIDEAKSILEE 266
Query: 256 LLAQATE 262
+A+A +
Sbjct: 267 TIAKAKD 273
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAKA 270
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 167/288 (57%), Gaps = 1/288 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + R AL V + PA + EAMRY++L GGKR+RP+L A+ E VGG ++ +
Sbjct: 37 MQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLR 96
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
CA+E+IH SLVHDD+PCMDND RRGKPT H FGE +A+LAGDAL +LAFE + +
Sbjct: 97 AGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPE 156
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
I + LG+A GS+G+ G+ +D+ S GK +S +L +H KT LL +
Sbjct: 157 DDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREMHRLKTGALLLGS 216
Query: 181 VVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V+ G + + + Y + +G+ FQVVDDILDV S LGKTAGKD +DK T
Sbjct: 217 VLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPT 276
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ L+G+E AR A L QA L +A L LA + R H
Sbjct: 277 FVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 324
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 172/265 (64%), Gaps = 2/265 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ +M YSL+AGGKR+RP+L +A+ + VG D + + ACALEMIHT SL+HDDLP MD
Sbjct: 33 KLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMD 92
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHK + E TAILAGDALL+LAF V + ++ +R++R + E+ + G+
Sbjct: 93 NDDYRRGKLTNHKAYDEGTAILAGDALLTLAFT-VILRQQDVPAERLLRIVDEISRSAGA 151
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+++D+++E + +S+ EL+ +H+ KT L AA+ G I+ G + ++ + YA
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELQRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYA 211
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DDILDV +++++GK G D + K+TY L ++ A+ A + A +
Sbjct: 212 DHFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVESAVD 271
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L F AA L L Y+ R+
Sbjct: 272 ALHIFG-DEAAFLRELVLYLVRRKQ 295
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 6/284 (2%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV+ LD + R A ++ EAMRYS+L GGKR+RP LC+A+ + +G A+ AC+
Sbjct: 18 RVDAELDRCIT-RDSASGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACS 76
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SL+HDDLP MD+D+ RRG+PT H F E TAILAGDAL +LAF + A++ +
Sbjct: 77 VELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALAFGWL-AEAPGL 135
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + EL A G G+V G+ +D++S GK ++L +LE +H HKT L+E +V G
Sbjct: 136 SESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIG 195
Query: 185 VIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ + + + +YA+ +GL FQV DD+LD+ + +GK G D K TYP L
Sbjct: 196 ALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPAL 255
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G+E AR+ +LL QA + L F A PL +A Y+ +R H
Sbjct: 256 LGLEGAREHLANLLEQAQQSLQAFG-PEADPLRAMADYVVARTH 298
>gi|422338359|ref|ZP_16419319.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355372275|gb|EHG19616.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 297
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 170/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L A+ EL+ + + + A ALEMIH+ SL
Sbjct: 22 ELQELSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLNENINKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSFEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G +G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGIKGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + +ELGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
D + +A E + F + L LA +I +R
Sbjct: 262 LNDTVEKAKEIIKNKFGEEKGKNLISLADFIKNRN 296
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|444361872|ref|ZP_21162450.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
gi|444372694|ref|ZP_21172127.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|443592942|gb|ELT61706.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|443597987|gb|ELT66387.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
Length = 294
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 175/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + PAK+HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G+E +R+ A L A+A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLEASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 171/287 (59%), Gaps = 10/287 (3%)
Query: 7 RVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R +AL++T+ + P ++HEAMRY++L GGKR+RP+L ++ +G E+ A A
Sbjct: 14 RAERALEKTLPPANNPPKRLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLDAPASA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SLVHDDLP MDND RRG PT HK FGE TA+LAGDAL +LAF +A ++ I
Sbjct: 74 VELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAI 133
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+ + L A GS G+ G+ +D+DS G ++L+E+E +H KT L+ A+V+ G
Sbjct: 134 PAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLG 193
Query: 185 VIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+E + ++A+CIGL FQ+ DD+LDV + LGK G D DK TYP L
Sbjct: 194 AWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSL 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAY---YIASRQH 287
+G+ A+ A LL A + L + AP HL + +I R+H
Sbjct: 254 LGLTQAKARAQSLLEDARQTLRAID----APTEHLEWLADFIVKRRH 296
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 173/284 (60%), Gaps = 6/284 (2%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV+ LD + R A ++ EAMRYS+L GGKR+RP LC+A+ + +G A+ AC+
Sbjct: 18 RVDAELDRCIT-RDSASGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACS 76
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SL+HDDLP MD+D+ RRG+PT H F E TAILAGDAL +LAF +A
Sbjct: 77 VELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLP 136
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
R++ + EL A G G+V G+ +D++S GK ++L +LE +H HKT L+E +V G
Sbjct: 137 ESVRLI-MVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIG 195
Query: 185 VIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ + + + +YA+ +GL FQV DD+LD+ + +GK G D K TYP L
Sbjct: 196 ALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPAL 255
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G+E AR+ +LL QA + L F A PL +A Y+ +R H
Sbjct: 256 LGLEGAREHLANLLEQAQQSLQAFG-PEADPLRAMADYVVARTH 298
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKGILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 178/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL++ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+++A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIVERRH 295
>gi|389792829|ref|ZP_10196011.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
gi|388435693|gb|EIL92590.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
Length = 293
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 174/282 (61%), Gaps = 4/282 (1%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R +ALD + + PA +H AMRY++L GGKR+RP+L A+ + +G D ACA
Sbjct: 11 RAEQALDHRLPPADQSPADLHRAMRYAVLGGGKRLRPLLVYATAQALGEDGPQLDAAACA 70
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST-E 123
+E+IH SLVHDDLP MD+D RRG+PT H VFGE AILAGDAL +LAFE +A +T +
Sbjct: 71 VELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFEILAEDTTRQ 130
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
P + + LG A G+EG+ G+ +D+ + G+ ++L +LE++H KT L+ A+V
Sbjct: 131 TDPATGMAMLRTLGRACGAEGMAGGQALDLAAVGQPLTLAQLEHMHACKTGALIRASVRL 190
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G + GG+ ++ + YA +GL FQV DDILDV S +GKTAGKD + K T+P +
Sbjct: 191 GALAAGGDADVLQALDDYANAVGLAFQVRDDILDVEGESIVIGKTAGKDAAAGKPTFPSI 250
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+G++ +R +L A ++ R A L LA+Y A R
Sbjct: 251 IGLDASRARLAELTNAALAAISPLG-ERGALLRELAHYAAQR 291
>gi|420247661|ref|ZP_14751056.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
gi|398070555|gb|EJL61849.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
Length = 293
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 173/288 (60%), Gaps = 6/288 (2%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL++ + PA++HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLDRVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ALEMIH SLVHDD+PCMD+D+ RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 DAASAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF--VA 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTSDVLAPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLR 184
Query: 179 AAVVCGVIIG-GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + ++ + Y+ +GL FQVVDDILDVT S LGKTAGKD K
Sbjct: 185 AAVRMGALTGETPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGK 244
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R A L + A + LA F ARA L LA + +R
Sbjct: 245 PTYVSIIGLDASRALAAQLRSDAHQALAPFG-ARAQRLAELADLVVNR 291
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Query: 1 MTSKAKRVNKALDE--TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M K +N+ L+E T + + +AM YSL+AGGKR+RP+L +A+ + +G D
Sbjct: 6 MQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKF 65
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ++ ++E IHT SL+HDDLP MDNDD+RRGK TNHKVFGE AILAGDALL++AFE +
Sbjct: 66 LRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFE-II 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A + + ++ I E+ A G+EG+V G+++D+ SE K + + L+ +H KT L
Sbjct: 125 ATDKNVDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFC 184
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA+ G I+ G + ++ + +YAR GL FQ+ DDILDV K +GK G D + K+
Sbjct: 185 AAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGSDEKNHKS 244
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TY L + +A+ A + + +A L F A L L Y+ +R
Sbjct: 245 TYVTLGSLGSAKALAQEAVDKAKASLVDFG-ENAEFLRALVDYLITRN 291
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 175/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + PAK+HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G+E +R+ A L A+A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLEASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLGAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEE 265
Query: 256 LLAQA 260
+A+A
Sbjct: 266 TIAKA 270
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 169/291 (58%), Gaps = 11/291 (3%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIH------EAMRYSLLAGGKRVRPVLCIASCELVGGD 54
MT + V AL ++ PA H +AMRY+ L GGKRVRP+L A+ ++ G
Sbjct: 10 MTDIQQHVETALAASL----PAGTHAATPLFDAMRYAALDGGKRVRPLLVFAAGDVSGAT 65
Query: 55 ESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF 114
+ ACA+E IH SLVHDDLPCMD+D RRGKPT H GE A+LAGDAL + AF
Sbjct: 66 PEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAF 125
Query: 115 EHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
E +A + P R + ++ L A G G+ G+ +D+ + G + LE +H KT
Sbjct: 126 ELLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTG 185
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
L++AAV G + G + E+ + +YAR IGL FQV+DD+LD S LGKTAGKD
Sbjct: 186 ALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSATLGKTAGKDAA 245
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
DK TY LMG+ AR +A LLA A E LA F ARA L LA YI +R
Sbjct: 246 HDKPTYVSLMGLGEARSYAHALLADAHEALALFG-ARARRLQQLADYIVAR 295
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 166/264 (62%), Gaps = 6/264 (2%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+M+YSL AGGKR+RP+L +AS ++ D MP AC +EMIHT SL+HDDLP MDNDD
Sbjct: 34 ESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDD 93
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHV---AAKSTEISPDRVVRAIAELGSAVGS 142
+RRGK TNHKV+ E AILAGD LL+ +FE + A K +I + + AI E+ ++ G
Sbjct: 94 YRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIY--KHIVAIKEISNSAGV 151
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G++ G+++D++SE K + L+ IH++KTA L+ ++ G II G ++ + K
Sbjct: 152 HGMIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIAGAQEEDIRNMEKVG 211
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQ+ DDILDV +LGK+ G+DL K+TYP L+G+E A L +
Sbjct: 212 LNLGLAFQIKDDILDVVGDEAKLGKSIGRDLEKHKSTYPALIGLE-ASIEKVGALTNNVK 270
Query: 263 ELAYFEVARAAPLYHLAYYIASRQ 286
+L + ++A L L Y+ SR+
Sbjct: 271 QLLHRYSSKAEFLLELCDYLTSRE 294
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
Query: 8 VNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES--SAMPVACA 64
+++ L ++++ L PA + +AM YSL AGGKR+RP+L +A+ L G D+S + +ACA
Sbjct: 16 IDEKLPQSIRALNAPASLKDAMIYSLEAGGKRIRPLLLLAT--LKGFDKSFETGYELACA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDDLP MD+DD RRGKPTNHKVFGE TAILAGDALL+ +FE +A S+++
Sbjct: 74 IEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTHSFERIA--SSQL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
+P++VVR I EL A G G++ G++ D++ E + ++L EL IH HKT LL ++V G
Sbjct: 132 APEKVVRLIKELAIAAGPVGMIGGQVADMEGEERALTLEELTYIHNHKTGDLLTYSIVAG 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
II + +VER+R +AR +GLLFQ+ DD+LDV + +GK G D+ ++K+TYP L+
Sbjct: 192 AIIADASEEDVERLRHFARELGLLFQIKDDLLDVEGEQELIGKPLGSDVGNNKSTYPSLL 251
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
G+ ++ A E L + L LA YI +R H
Sbjct: 252 GLNETKEVLNAHYDVALESLHKVSM-NTNLLESLADYIKNRNH 293
>gi|390952210|ref|YP_006415969.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
gi|390428779|gb|AFL75844.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
Length = 297
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/289 (44%), Positives = 189/289 (65%), Gaps = 5/289 (1%)
Query: 2 TSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
T +R+ +ALDE + P ++HEAMRYS+L GGKR+RP+L A+ E +G D +
Sbjct: 11 TQCQERLERALDELLPRASVPPLRLHEAMRYSVLGGGKRIRPLLTYATGEALGIDSALLD 70
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+E IH SL+HDDLP MD+DD RRG+PT H+ F + TAILAGDAL +LAF+ + A
Sbjct: 71 RPACAVEFIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDDATAILAGDALQTLAFQSL-A 129
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
++T + + + L A GS G+V G+ +D+D+EGK + + LE+IH+HKT L+ A
Sbjct: 130 EATGLDARIRIAMVEHLARASGSRGMVGGQALDLDAEGKALDVAMLEHIHIHKTGALIRA 189
Query: 180 AVVCGVIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G++ G + ER+ +YA+C+GL FQ+ DD+LDV + ++GKTAG+D DKA
Sbjct: 190 SVQMGILAHGALDADRAERLDRYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQALDKA 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G+ A++ A DL+A+A + F A PL +A + R++
Sbjct: 250 TYPALVGLAEAKEMAADLIAEALTAIEIFPDG-ADPLRWIASALLGRKN 297
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MD
Sbjct: 30 QLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+GE AILAGD LL+ AF+ + +T S + + AI + +A G
Sbjct: 90 NDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQ-LMTSNTVASAQQKLDAIQCVATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G N + +Y+
Sbjct: 149 EGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGCANNTTRTFLMEYS 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G+E A+ A + +QA +
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKHQAYLVGSQAHD 268
Query: 263 EL 264
L
Sbjct: 269 AL 270
>gi|440742834|ref|ZP_20922156.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
gi|440376685|gb|ELQ13348.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
Length = 295
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|416999235|ref|ZP_11939904.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
gi|333977388|gb|EGL78247.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
Length = 292
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MD
Sbjct: 30 QLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+GE AILAGD LL+ AF+ + +T S + + AI + +A G
Sbjct: 90 NDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQ-LMTSNTVASAQQKLDAIQCVATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G N + +Y+
Sbjct: 149 EGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTFLMEYS 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G++ A+ A + +QA +
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLDQAKHQAYLVGSQAHD 268
Query: 263 EL 264
L
Sbjct: 269 AL 270
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 179/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL++ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+ +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G+E A+++A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 248 TYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERRH 295
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 14/236 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N+ LDE + ++HPA I+EAMRYS+L G KR PV+C+A+CEL GGD +A
Sbjct: 51 WTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAF 110
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRGKP+NH V+G AILAGDAL LAF+H+ +
Sbjct: 111 PTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVS 170
Query: 120 KSTEISPDRVVRA-----IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
+ PD V RA I E+ VGS G+ AG+ +D+ EG L+ ++ K
Sbjct: 171 HT---PPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLSFVQE---KKFG 222
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
+ E + VCG ++GG E++ +R+Y R +G+L+QVVDDI + K S + G G
Sbjct: 223 AMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|421866286|ref|ZP_16297958.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
gi|358073869|emb|CCE48836.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
Length = 285
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 167/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PAK+HEAMRY++L GGKRVRP+LC A+ EL G E++ A ALEMIH SLVHDD+PC
Sbjct: 20 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 79
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 80 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDADALSPVQQAALVRELALAS 138
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G E + +
Sbjct: 139 GSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETMAALD 198
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G+E +R+ A L A+
Sbjct: 199 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRAE 258
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A + L F ARA L LA + +R
Sbjct: 259 AHDALKPFG-ARAQRLAELADLVVNR 283
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 178/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL++ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+++A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERRH 295
>gi|424070488|ref|ZP_17807923.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000494|gb|EKG40847.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 295
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLALYIVERRH 295
>gi|373115249|ref|ZP_09529425.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670541|gb|EHO35620.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 293
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 169/265 (63%), Gaps = 1/265 (0%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
+++AMRYSLL GGKR+RPVL + +C L GG A+P A A+EM+HT SL+HDDLPCM
Sbjct: 29 GNLYDAMRYSLLTGGKRLRPVLVLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLPCM 88
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D+DD RRG+PTNHKVFGE A+LAGD LL+ AFE + A ++ P+RV+ A L A G
Sbjct: 89 DDDDLRRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPERVLEAAGILARAAG 148
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+V G+++D+ EG+ + L E+E + KT L+ AAV G + GG + E + +Y
Sbjct: 149 GRGMVGGQVLDMAGEGRALGLTEVEELQRLKTGALIRAAVEMGCAVAGGAEEQREALCRY 208
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A C+GL FQ+ DDILDV LGK G D+ SDK T+ L G+ + R +L +A
Sbjct: 209 ADCLGLAFQIQDDILDVVGDEATLGKPIGSDVRSDKTTFVALKGLADCRILVAELTDRAV 268
Query: 262 EELAYFEVARAAPLYHLAYYIASRQ 286
E LA F + A L LA +A R+
Sbjct: 269 EALAPFG-SEAESLRGLAQSLAGRE 292
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
Q ++P I EAMRYS+ AGGKR+RPVL +A+ + V G VA LEMIHT SL+HD
Sbjct: 27 QGQYPPVILEAMRYSVFAGGKRMRPVLLMAAADAVNGRGEEYTHVAAGLEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP MD+DD+RRGKPTNHKV+GE AILAGDALL+ AFE V + ++ D ++R IAE+
Sbjct: 87 DLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALLTYAFE-VMGRQPDVLSDVLLRVIAEI 145
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
+AVG G+V G+ MD+ SEGK + L E+E +H KT L +A++ G ++ G +++
Sbjct: 146 AAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHKAKTGALFKASIRAGAMLAGAGEEQLQ 205
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+ +Y+ GL FQ+ DDILDVT + ELGK G D + KATY L ++ A+ A +
Sbjct: 206 DLTQYSDYFGLAFQITDDILDVTGNQAELGKPVGSDSKNQKATYVSLYSVDKAKSIAGEA 265
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ A L +F A L LA Y+ SR +
Sbjct: 266 VDGALNTLKFFG-PEADILRDLAKYLLSRNN 295
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+++E+M YSL+ GGKR+RP+L A E++ + + CA+E IHT SLVHDDLP MD
Sbjct: 30 QLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRG TNHKV+GE AILAGD LL+ AF+ + +T S + + AI + +A G
Sbjct: 90 NDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQ-LMTSNTVASAQQKLDAIQCVATAAGP 148
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+ SE K + L EL+ +H KT L A+V G+I+G N + +Y+
Sbjct: 149 EGMVGGQAFDLLSEDKHIPLEELKVLHSGKTGALFNASVELGLILGCANNTTRTALMEYS 208
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
C+GLLFQ+ DDILDVT + +ELGKT G D+ K+TY L+G+E A+ A + +QA +
Sbjct: 209 NCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKHQAYLVGSQAHD 268
Query: 263 EL 264
L
Sbjct: 269 AL 270
>gi|398311372|ref|ZP_10514846.1| geranyltranstransferase [Bacillus mojavensis RO-H-1]
Length = 296
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 185/284 (65%), Gaps = 7/284 (2%)
Query: 10 KALDETV-----QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
KA++E + L P + ++M YSL AGGKR+RP++ +A G E +PV CA
Sbjct: 14 KAVEEQLFVYTENLNIPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STE 123
+EMIHT SL+HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E
Sbjct: 74 VEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDE 133
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+S ++ +R + EL SA G+EG+V G+I D+++E + V+L ELE+IH KTAKLL V+
Sbjct: 134 VSAEKRLRLVNELISAAGTEGMVGGQIADMEAENRQVTLEELESIHERKTAKLLGFGVIA 193
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+ E+E +R ++ IG+ FQ+ DDILDV S +++GK G D ++K+TYP L
Sbjct: 194 GAILADAPEEEIETLRAFSSHIGIGFQIRDDILDVEGSEEKIGKRVGSDTTNEKSTYPSL 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +E A+K + +A + + + LY L IA+R H
Sbjct: 254 LSLEGAKKKLDGHIEEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 167/252 (66%), Gaps = 2/252 (0%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
MT ++K L E + L P + E+M YS+ AGGKR+RPVL +A+ E G + +
Sbjct: 9 MTEYKAIIDKELVEQIDYLSIPTSLKESMIYSVSAGGKRIRPVLLLATIEAFGKSPALGI 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A ALEM+HT SL+HDDLP MD+DD RRGKPTNHKVFGE TAILAGDALL+ +FE V A
Sbjct: 69 KAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTYSFE-VIA 127
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+I P + + A G EG+V G++ D++ E K ++L ELE IH +KT KLL+
Sbjct: 128 SMKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEELEYIHRNKTGKLLQY 187
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
AVV G IIGG + EV ++YA IGL FQ+ DDILD+ + ++GK G D+ +DK+T
Sbjct: 188 AVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSDVNNDKST 247
Query: 240 YPKLMGIENARK 251
YP L+ +E A++
Sbjct: 248 YPSLLTLEGAKE 259
>gi|422639114|ref|ZP_16702544.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|422667496|ref|ZP_16727359.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P ++++AMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEH-VAAKSTE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF +A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHPTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 181/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + E+M YSL GGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKESMLYSLETGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHLSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL +V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFSVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++R IG+ FQ+ DDILD+ S +++GK G D ++K+TYP L+ +E A K
Sbjct: 204 DIETLRTFSRHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + + L + LY L IA+R H
Sbjct: 263 LDVHIKEAKRLIGGLSLQKDLLYELCDLIAARDH 296
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 180/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE---SSAMPVA 62
K++ + L++ ++ R P I++AMRYS+ AGGKR+RP+LC+ S +++ D+ + +A
Sbjct: 15 KKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEINQKVLDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
D+ +V+A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + +Y + +GL FQ+ DD+LDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEKAQQLVEHYSQKAIDVIKKYD--NSELLIELTNYLINRE 298
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 169/244 (69%), Gaps = 1/244 (0%)
Query: 18 LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDD 77
L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAEL 136
LPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G EG+V G++ D+++EGK ++++ELE IH HK KLLE AV+ G I+ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEE 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ +A+ IGL FQ+ DDILDV + +E+GK G DL ++K+TY L ++ A+ +
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 257 LAQA 260
+A+A
Sbjct: 267 IAEA 270
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 173/265 (65%), Gaps = 5/265 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESS---AMPVACALEMIHTMSLVHDDLPCMD 82
E+MRYSL GGKR+RP+LC+A E V E++ A+ VACALE IHT SL+HDDLP MD
Sbjct: 34 ESMRYSLFVGGKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMD 93
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAELGSAVG 141
+DD RRGKPTNH VFGE AILAGD LL+ AF+ ++++ S +I+ +R I + A G
Sbjct: 94 DDDLRRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAG 153
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+V G+ +D+ EG+ V L IH KT L+ A+V+ G ++ G + + ++ Y
Sbjct: 154 PLGMVGGQSLDMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQETALKTY 213
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
IGL FQ+VDD+LDV ++++LGK AG DL SDK TYP L G E +R A + + +A
Sbjct: 214 GDNIGLAFQIVDDLLDVEATTEQLGKPAGSDLKSDKVTYPSLFGKETSRTMAREAVQEAI 273
Query: 262 EELAYFEVARAAPLYHLAYYIASRQ 286
LA F+ +A PL +LA +I R+
Sbjct: 274 AALAAFD-HQADPLRNLANFIVDRK 297
>gi|339010261|ref|ZP_08642831.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
gi|338772416|gb|EGP31949.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
Length = 298
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 172/268 (64%), Gaps = 4/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P++++E+M YSL+AGGKR+RP+L +A E +P A ALEMIHT SL+HDDLP
Sbjct: 30 PSELYESMHYSLMAGGKRLRPILVLAVLEAFQQPIERGLPYAIALEMIHTYSLIHDDLPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST---EISPDRVVRAIAELG 137
MD+DD RRGKPTNHKVFGE TAILAGDALL+ AF VA+ E+ + V+ IAELG
Sbjct: 90 MDDDDLRRGKPTNHKVFGEATAILAGDALLTRAFGLVASSYVHHPEVKAETTVQLIAELG 149
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
G G+V G++ DI EGK +SL +LE IHLHKT LL AA+ G + +++
Sbjct: 150 QRAGERGMVGGQMADIMGEGKQLSLEQLEYIHLHKTGDLLIAALRGGGYLAEATPKQLQA 209
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YA IGL FQ+ DDIL+V + LGK G D +KATYP L+G+ +++ L+
Sbjct: 210 LTNYAVKIGLAFQIKDDILNVEGDAALLGKAVGSDASKEKATYPALLGLAESKRRLALLV 269
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASR 285
+A ELA ++ A L+ LA Y+ R
Sbjct: 270 KEAQAELAAVKINHPA-LFALAEYVMER 296
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 178/273 (65%), Gaps = 10/273 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++ A A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H VFGEDTA+LAGD L S+AFE + ++ + I V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGSRLFDEQGQGIDSQIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +VAG+++D+ +EGK V ELENIH +KT L++AA++ G V + G
Sbjct: 153 ILATA--SSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R++ + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA + LAYF +A L +++++ +R+
Sbjct: 271 QTLHDQAFDALAYFG-DQAQELTAISHFLLARK 302
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 168/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELQELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ + +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYILSQKNLKFLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + +ELGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
D + +A E + F + L LA +I R
Sbjct: 262 LNDTVEKAKEIIKNNFGEEKGKILISLADFIKDRN 296
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 178/291 (61%), Gaps = 27/291 (9%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD------ESSAMPVACALEMIHTMSLV 74
P IH AMR+S AGGKR+RP+L + + +V G E++A + ALEMIHT SL+
Sbjct: 33 PHSIHRAMRHSTFAGGKRLRPILALEAARMVSGGTLTPALETAAAELGAALEMIHTYSLI 92
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV----AAKSTEISPDRVV 130
HDDLP +DNDD RRG+PT H VFGE TAILAGDAL +LAF+ + A +T +S R V
Sbjct: 93 HDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIANLHAPAATVVSILREV 152
Query: 131 RAIAELGSAVGS---------EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
A G VGS G++ G++MDI+SEG + +E IH KT L+ +V
Sbjct: 153 SAAVATG--VGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELVEAIHRAKTGALITVSV 210
Query: 182 VCGVIIGGGNMIE-----VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
V G ++G G+ + R+R + + GL FQ+VDD+LD+T+ S +LGKTAGKD +D
Sbjct: 211 VAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQDSAQLGKTAGKDTATD 270
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
KAT+P + GI + A +L+A A LA F AAPL LA ++ R++
Sbjct: 271 KATWPAVFGIPQSIHDAEELIADAFAALARF-AETAAPLKALANFLTERKN 320
>gi|398983680|ref|ZP_10690144.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
gi|399012337|ref|ZP_10714661.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398115899|gb|EJM05672.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398156852|gb|EJM45264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
Length = 295
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 175/285 (61%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ P A+++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + + ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSD 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
S D ++ + L A G G+V G+ +D+ S G + N LE +H HKT L+E +V
Sbjct: 132 CSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQNALEQMHRHKTGALIEVSVKL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G E+ ++ YA+ IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGRAEQDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G++ A+ +A +L QA L F+ A A PL LA YI R+H
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERRH 295
>gi|452994013|emb|CCQ94485.1| geranyltranstransferase [Clostridium ultunense Esp]
Length = 296
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ ++M YSL AGGKR RP+L + E +G + A A+EMIHT SL+HDDLP
Sbjct: 28 PERLLQSMDYSLRAGGKRFRPILLFSVLESIGKSRELGLETAVAIEMIHTYSLIHDDLPG 87
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS---TEISPDRVVRAIAELG 137
MDNDD+RRGK TNHKVFGE AILAGDALL+ AF ++ E+S + I +L
Sbjct: 88 MDNDDYRRGKLTNHKVFGEGMAILAGDALLTWAFYLLSVLPDFHPELSHATSLLLIRKLA 147
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
A G G+V G+ +D+++E K + L+ELE IH HKT ++ + + G I+GG + E
Sbjct: 148 EAAGPTGMVGGQALDLEAENKQLPLSELEKIHTHKTGDMIHFSAMAGAILGGATTKQKEA 207
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
YAR +GL FQ+ DDIL++ ++LGK G D K+TYP L+G+E + + L+
Sbjct: 208 FSTYARKLGLAFQIQDDILNIIGDEQKLGKRVGSDAQLGKSTYPALLGMEESIAYMNRLV 267
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASR 285
+A + + + R L+ LA YI R
Sbjct: 268 DEAKKAIQIDGIKREH-LHLLADYIVHR 294
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 178/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL++ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A +CA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGASCA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+++A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIVERRH 295
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 184/289 (63%), Gaps = 6/289 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHPA---KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS 57
+T VN L E + + A + +AM+YSL +GGKR+RP+L + E++ GD S
Sbjct: 10 LTQYTSEVNSVLKEIMNIEKNALAPGLVKAMKYSLFSGGKRLRPILTLMVAEMLDGDRDS 69
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
A+ V ++E++HT SL+HDDLP MD+DDFRRGKP+NHKVFG TAILAGDALL+ AF +
Sbjct: 70 ALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAILAGDALLTFAFNIL 129
Query: 118 AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + PD+V++ I + G G+V G+++D+++E K++SL EL+ IH KT L
Sbjct: 130 S--KLNLPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEELKKIHSGKTGALF 187
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+++++ G + E+ + +YAR +GL FQ+VDDILDVT + + LGK G+D +K
Sbjct: 188 KSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLGKRVGRDDELNK 247
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
ATYP+L+G++ A K A +A + L F RA L L YI RQ
Sbjct: 248 ATYPRLLGLKQAVKEAEFNAEKARDSLGPFG-ERAFLLKQLVDYILVRQ 295
>gi|422651839|ref|ZP_16714630.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 180/289 (62%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P ++++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQPPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G++ A+ +A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 248 TYPALLGLDAAKGYALELRDQALAALSLFDAA-AEPLRELARYIVERRH 295
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 175/287 (60%), Gaps = 1/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M ++ RV +AL V PA + EAMRY++L GGKR+RP+L +A+ VGG +A+
Sbjct: 26 MRAELARVEEALSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVGGQPEAALR 85
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDD+PCMDND RRGKPT H FGE A+LAGDAL +LAFE + +
Sbjct: 86 AACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGDALQALAFELLTPE 145
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ R EL A G+ G+ G+ +D+ S G +S ++L ++H KT LL+A+
Sbjct: 146 DG-VPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSLKTGALLQAS 204
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G + G ++ + Y +GL FQVVDD+LDVT+ S LGKTAGKD SDK TY
Sbjct: 205 VVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTY 264
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
LMG+++AR +A L AQA L + L LA + R H
Sbjct: 265 VSLMGLQSARAYADVLHAQALAALVASGLTDTRALAALADMVVRRSH 311
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 178/273 (65%), Gaps = 10/273 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++ A A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H VFGEDTA+LAGD L S+AFE +A++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIVLKQVQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +VAG+++D+ +EGK V ELENIH +KT L++AA++ G V + G
Sbjct: 153 ILATA--SSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R++ + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA + LAYF +A L +++++ +R+
Sbjct: 271 QTLHDQAFDALAYFG-DQAQELTAISHFLLARK 302
>gi|422590457|ref|ZP_16665112.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 295
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 179/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G++ A+ +A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 248 TYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIVERRH 295
>gi|422630479|ref|ZP_16695676.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 178/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P ++++AMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+ +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLTPHLTS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 248 TYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|422673861|ref|ZP_16733218.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254579|gb|AAY35675.1| farnesyl-diphosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 295
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P ++++AMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 4/284 (1%)
Query: 7 RVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
R+N L Q + P + +AMRY +L GGKR+RP L + S L + + VAC
Sbjct: 18 RLNTLLSSQPQNGEISRPEMLIKAMRYGVLNGGKRLRPFLVLQSSALFDIPAENVLDVAC 77
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
ALE +H SL+HDDLP MDND RRGKPT HK F E TAILAG+ALL+ AFE +A K+
Sbjct: 78 ALECVHCYSLIHDDLPAMDNDILRRGKPTLHKAFDEATAILAGNALLTFAFETIAHKACT 137
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+S D ++ I L A G G++ G+++DI++E K ++ + KTA L+ A
Sbjct: 138 LSFDTKIKLITALAQASGLGGMIGGQMLDIEAEKKLQKSKDIITLQRMKTAALISFACQA 197
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G +I + E++ + +GL FQ+ DD+LD T SS+ LGKTAGKD + KAT+ +L
Sbjct: 198 GALIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLGKTAGKDESAQKATFVRL 257
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
GIE +K + +A+A L F A+A PL H A++ A+R++
Sbjct: 258 YGIEETQKKRDEFIAKAETLLLPFG-AKAKPLLHAAHFSATRKN 300
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 185/290 (63%), Gaps = 4/290 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLC-IASCELVGGDESS 57
+ +KA+ VNKALD+ + + + PAK+H++MRYS L GGKR+RPVL I + L G +E
Sbjct: 7 LVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFGVEEER 66
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
MP A A+E++H SL+HDDLPCMD+DD+RRG+ NHKVFG+ A+L+GDALL+ AFE +
Sbjct: 67 IMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTYAFELL 126
Query: 118 AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + +++++ E+ G G+V G+ D+ +EGK V +LE IH +KT LL
Sbjct: 127 TKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYKTGALL 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+AAV G I+GG + E+ + YA IGL FQ++DDILD+ ++LGK G D DK
Sbjct: 187 QAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEVGSDEGQDK 246
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
AT+P + G+E +R A + A E + FE A L LA YI R +
Sbjct: 247 ATFPSVYGLEESRAMAQKKVQAAKEAIERFE-EDAELLIQLADYIIERDY 295
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/126 (76%), Positives = 109/126 (86%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA RVNKALD+ V LR P K+HEAMRYSLLAGGKRVRPVLC+A+CELVGG E AMP
Sbjct: 85 MIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMP 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALL+ AFEH+A
Sbjct: 145 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 204
Query: 121 STEISP 126
+ ++SP
Sbjct: 205 TVDVSP 210
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 179/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE---SSAMPVA 62
K+V + L++ ++ R P I++AMRYS+ AGGKR+RP+LC+ S ++V D+ + +A
Sbjct: 15 KKVEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EIS-PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
+ +++A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + +Y + +GL FQ+ DD+LDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEKAQQLVEHYSQKAIDVIKKYD--NSELLIELTNYLINRE 298
>gi|424065783|ref|ZP_17803257.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002992|gb|EKG43211.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 295
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P ++++AMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQQRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 173/285 (60%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV +ALD + HPA++H+AMRYS L+GGKR+RP+L A+ + +G + ACA
Sbjct: 23 RVEQALDYWLPEAQTHPARLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLDGPACA 82
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E IH SL+HDDLP MD+D+ RRG+PT HK F E TAILAGDAL +LAF +A +
Sbjct: 83 VECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAHDPGGV 142
Query: 125 SPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
R +R + L A GS G+ G+ +D+ + G+ + + +LE++H+HKT L+ A+V
Sbjct: 143 QNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIRASVQL 202
Query: 184 GVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + E ++R+ Y +CIGL FQ+ DDILDV ++ LGK G D KATYP
Sbjct: 203 GALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQAKATYPA 262
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+ AR+ A L+ A E L + + A L +A Y R H
Sbjct: 263 LLGMREARETADRLVEDALESLEGLDQS-ADVLRGIAEYCIGRNH 306
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 180/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD---ESSAMPVA 62
K V + LD+ ++ + P I++AMRYS+ AGGKR+RP+LC+ S ++V D + + +A
Sbjct: 15 KNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDKEIDRKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPT+H VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLNLAAEVCLNWIL 134
Query: 123 EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
++ +V+A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 NYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + +Y + +GL FQ+ DD+LDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ + +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEEAQQLVKNYSQKAIDVIKKYD--NSELLIELTNYLINRE 298
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SL+HD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYDQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEYAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EQLLVFAKNIGLAFQIRDDILDVEGNEEEIGKPIGSDVSNEKSTYTTLFTVDRAKAILEE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|421145508|ref|ZP_15605374.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488094|gb|EJG08983.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 297
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L + EL+ GD + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETITKGMEYAILNGGKRLRPFLLFVTLELLNGDIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G++ ++K
Sbjct: 202 DKREILEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMKESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
D + +A E + F L LA +I R
Sbjct: 262 LNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 171/279 (61%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV AL V + P + +AMRY++L GGKR+RP+L +A+ E VGG+E++A+ ACA E
Sbjct: 24 RVEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAE 83
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
+IH SLVHDDLPCMDND RRGKPT H FGE A+LAGDAL +LAFE +A + EI
Sbjct: 84 LIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPA 143
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
L A GS+G+ G+ +D+ S G ++ +L +H KT LL+ +V G
Sbjct: 144 ATQATLCRLLARAAGSQGMAGGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMGAA 203
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
G + + +R Y IGL FQVVDDILDVT S+ LGKTAGKD +DK TY L+G+
Sbjct: 204 CGNVSAAALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGL 263
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+ AR A LLA A L +A A L LA+ + R
Sbjct: 264 DGARTQARQLLADALAALTKSGLADTAALRALAHMVVDR 302
>gi|440720697|ref|ZP_20901109.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|440727848|ref|ZP_20908074.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|443641335|ref|ZP_21125185.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
gi|440363253|gb|ELQ00423.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|440365067|gb|ELQ02181.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|443281352|gb|ELS40357.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
Length = 295
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 176/285 (61%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN ALD + P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ ++ + L A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAETRLQMVTTLAIAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + ++ ++ YAR IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA + L+ F+ A A PL LA YI R+H
Sbjct: 252 LLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|421874465|ref|ZP_16306069.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
gi|372456509|emb|CCF15618.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
Length = 298
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 171/268 (63%), Gaps = 4/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P++++E+M YSL+AGGKR+RP+L +A E +P A ALEMIHT SL+HDDLP
Sbjct: 30 PSELYESMHYSLMAGGKRLRPILVLAVLEAFQQPIERGLPYAIALEMIHTYSLIHDDLPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST---EISPDRVVRAIAELG 137
MD+DD RRGKPTNHKVFGE TAILAGDALL+ AF VA+ E+ + V+ IAELG
Sbjct: 90 MDDDDLRRGKPTNHKVFGEATAILAGDALLTRAFGLVASSYVHHPEVKAETTVQLIAELG 149
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
G G+V G++ DI EGK +SL +LE IHLHKT LL AA+ G + +++
Sbjct: 150 QRAGERGMVGGQMADIMGEGKQLSLEQLEYIHLHKTGDLLIAALRGGGYLAEATPKQLQA 209
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YA IGL FQ+ DDIL+V + LGK G D +KATYP L+G+ +++ L+
Sbjct: 210 LTNYAVKIGLAFQIKDDILNVEGDAALLGKAVGSDASKEKATYPALLGLAESKRRLALLV 269
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASR 285
+A EL ++ A L+ LA Y+ R
Sbjct: 270 KEAQAELVAVKINHPA-LFALAEYVMER 296
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +HEAMRYS L GGKR+RP+L +A+ EL +++ A+E IH SLVHDD+P
Sbjct: 30 PQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECIHVYSLVHDDMPV 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H FGE TA+L GDAL +LAF+ + + TE+S R +R + L A
Sbjct: 90 MDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFD-ILSTETELSTARQLRMVKVLAQAS 148
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV-VCGVIIGGGNMIEVERVR 199
GS G+ G+ +D+ + G+D+S ELE +H KT L+ AAV + G+ N ++ +
Sbjct: 149 GSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLD 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQV+DD+LD + LGKTAGKD ++K TY KLMG++ AR +A L+AQ
Sbjct: 209 VYASKLGLAFQVIDDVLDCEADTATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQ 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F+ RA L LA ++ +R+
Sbjct: 269 AIDALQTFDT-RADHLRTLAQFVVARK 294
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ + K VN+ALD + P ++ AMR+SL AGGKR+RP+LC+A+ E VGG A+
Sbjct: 8 LARRQKAVNEALDRILADCVPGGRLFSAMRHSLKAGGKRLRPILCMAAAEAVGGTWEDAL 67
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
CA+E+IHT SLVHDDLP +DND RRG+P H F E TAI AGDAL +LAFE +++
Sbjct: 68 FPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDALHTLAFEVLSS 127
Query: 120 -KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ R + I + A G+ G++ G++ DI ++G ++ L++L+ +H KT L+
Sbjct: 128 DRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKELHRLKTGALIT 187
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V G + G + + ++ +YA IGL FQV DD+L+V GK+ G D V KA
Sbjct: 188 ASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGKSIGTDHVLGKA 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
T+P LMGI+ +RKFA L+ ++ + + + +A PL +A Y+ R+
Sbjct: 248 TFPNLMGIDASRKFAAQLVEKSLQAIESLGI-KANPLRAVAKYVIERK 294
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + G + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A + EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EG+ ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+ + +A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ D
Sbjct: 206 KNLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILED 265
Query: 256 LLAQATEELAYFEV 269
+A+A + ++ ++
Sbjct: 266 TIAKAKDAISSLQL 279
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 180/291 (61%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ A V+ AL E PA + E+M YSL AGGKR+RP+L IA+ E GG +A
Sbjct: 17 LNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAA 76
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV- 117
+PVACA+EM+HT SL+HDDLP MD+DD+RRGK TNHKV+GE AILAGDALL+ AF V
Sbjct: 77 LPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVV 136
Query: 118 -AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A + IS D ++ + EL G+ G+V G++ D+ E + ELE IHLHKTA L
Sbjct: 137 QAGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHKTADL 196
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ +++ G IGG N ++E +R++ R +GL FQ+ DDILD+ ++GK D+ +
Sbjct: 197 IIFSLLAGGRIGGANKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQE 256
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP +G+E +++ L A A + L + ++ L +A Y+ R H
Sbjct: 257 KVTYPFFIGMEASQQQVEKLTATAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 192/289 (66%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+T++ + + L VQ L P + +M YSL AGGKR+RPVL +A G +E +
Sbjct: 9 LTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGI 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PV CA+EMIHT SL+HDDLPCMD+DD RRGKPTNHKV+GE TA+LAGDALL+ +F + +
Sbjct: 69 PVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITS 128
Query: 120 K-STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ S+ +S D+ +R + EL + G+ G+V G+ D+++E K VSL ELE+IH KT KLL
Sbjct: 129 QLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHARKTGKLLT 188
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G ++ G + ++E++R+++ IG+ FQ+ DDILD+ S +++GK G D ++K+
Sbjct: 189 FSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKS 248
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ + A++ + + +A E ++ ++ + L+ L IASR H
Sbjct: 249 TYPSLLTLSGAKEKLHEHITRAKEIVSNLQLEQQL-LHDLCDLIASRDH 296
>gi|402836862|ref|ZP_10885393.1| polyprenyl synthetase [Mogibacterium sp. CM50]
gi|402269878|gb|EJU19147.1| polyprenyl synthetase [Mogibacterium sp. CM50]
Length = 297
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 5/268 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ ++M+YS+++GGKR+RPV+ +A+CE GGD A+P ACALE IHT SL+HDDLP MDN
Sbjct: 29 LFDSMKYSVMSGGKRLRPVMLLAACEFSGGDIYEALPFACALEYIHTYSLIHDDLPAMDN 88
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD-----RVVRAIAELGS 138
DD RRG PTNHKVFGED A+L GDALL+ A E + T D R A +
Sbjct: 89 DDLRRGNPTNHKVFGEDIAVLGGDALLNTAMEVMFRDLTYFFDDSEKLKRHSCAGLTIAK 148
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G G++AG+++D+++ D S ++ I +KT L+ A V+ G+ IGG + ++
Sbjct: 149 AAGVTGMIAGQVVDVENGMDDCSQEFVDFIEENKTGALIAAPVIAGLGIGGADKEMIDAF 208
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
Y+RCIG FQ+ DDILD+T S ELGKT GKD ++A + + GI++AR L
Sbjct: 209 TVYSRCIGKAFQISDDILDMTGSVDELGKTPGKDSHHERANFALVNGIDSARAELHTLTM 268
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQ 286
A E + +E LA + R+
Sbjct: 269 SAIESIEKYESPDKKFFTDLAIKLEKRR 296
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 125/147 (85%)
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
MIHTMSLVHDDLPC+DNDDFRRGKPT+HKV+GE+ A+L GDALLSL+FEH+A + +S
Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
DR+VR I EL +VGSEGLVAG+++DI SEG DV L+ LE IH+HKTA LLE++VV G I
Sbjct: 61 DRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAI 120
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVD 213
+GGG+ ++E++RK+AR IGLLFQVVD
Sbjct: 121 MGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 192/289 (66%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+T++ + + L VQ L P ++ +M YSL AGGKR+RPVL +A G E +
Sbjct: 9 LTTRKQAIEDYLFTYVQELSIPEELKSSMLYSLKAGGKRLRPVLVLALLNAYGKREEDGI 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PV CA+EMIHT SL+HDDLPCMD+DD RRGKPTNHKV+GE TA+LAGDALL+ +F + +
Sbjct: 69 PVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITS 128
Query: 120 K-STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ S ++ D+ +R I EL ++ G+ G+V G+ D+++E K + L+ELE+IH KT KLL
Sbjct: 129 QLSDDVPADQKLRIIDELVTSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTGKLLT 188
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+VV G I+ G E+E++R+++ IG+ FQ+ DDILD+ S +++GK G D ++K+
Sbjct: 189 FSVVAGAILAGAPDDEIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRIGSDTANEKS 248
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ + A++ + + +A E ++ E+ + L+ L IASR H
Sbjct: 249 TYPSLLTLSGAKEKLDEHITRAKEIVSNLELEQNL-LHDLCDLIASRDH 296
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 159/250 (63%), Gaps = 8/250 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD------ESSAMPVACALEMIHTMSLV 74
PA++HEAMRY++L GGKRVR L A+ + + E+S A A+E+IH SLV
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAIEASMDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE +A I+P VV+A
Sbjct: 94 HDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLA--GMPIAPALVVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS G+ G+ +D+ S GK ++ +EL+ +H KT +L A+V G ++ G +
Sbjct: 152 VLARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMKTGAMLAASVTLGGVVAGASSAV 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT S LGKTAGKD V +K TY L+G+E AR+ A
Sbjct: 212 RQALDAYAQAVGLAFQVVDDILDVTADSASLGKTAGKDAVENKPTYVSLLGLEPARELAE 271
Query: 255 DLLAQATEEL 264
+L A + L
Sbjct: 272 ELRLAAHQAL 281
>gi|422296714|ref|ZP_16384379.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
gi|407992059|gb|EKG33764.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
Length = 295
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 179/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPSPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G++ A+ +A +L QA L+ F+ A A PL LA YI R+H
Sbjct: 248 TYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIVERRH 295
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 3/265 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ EAMRYSLLAGGKRVRP+LC+ S L G +P A A+E+IHT SL+HDDLP MD
Sbjct: 34 RLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAMD 93
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDDFRRG+PT+HK FGE AILAGDA A + + E + ++ + + EL S+ G
Sbjct: 94 NDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQ-EGTCEQRLGVVQELASSTGV 152
Query: 143 EGLVAGEIMDIDSEGKDVSLNE--LENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+V G+++D+D G S + L IH +KT L+ ++ G I+ G +E + +
Sbjct: 153 NGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAISR 212
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA +GL FQ+VDD+LD SS+ LGK AG D KAT+ + G+E AR+ A +A
Sbjct: 213 YATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACERA 272
Query: 261 TEELAYFEVARAAPLYHLAYYIASR 285
L E + L LA ++ R
Sbjct: 273 LRALGRLEGRDTSALGELALFVRHR 297
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 188/289 (65%), Gaps = 6/289 (2%)
Query: 1 MTSKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T + V A+++ + R+P +++ +AMR+SL AGGKR+RP+LC+ S E VGG++
Sbjct: 19 LTEYGRLVVAAMEKRIA-RYPEESRVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHV 77
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV- 117
M VA ALE IHT SL+HDDLP +D+DD+RRG PT HK F E TAILAGD LL+ AFE +
Sbjct: 78 MDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILS 137
Query: 118 -AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
AA + ++V+ IA + A G G++ G+++DI+ E + ++ ELE+IH +KT +
Sbjct: 138 HAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREELEDIHNNKTGAM 197
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+E +V G +GGG ++ + YA+ +GL FQV+DDIL+V K +GK G D
Sbjct: 198 IEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGDPKVMGKAVGTDAELG 257
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K+TYP LMG++ A+ FA L+ +A + + F+ + PL +A YI +R
Sbjct: 258 KSTYPALMGLDGAQDFAERLINKALQAIVSFD-NKCDPLRSIATYILTR 305
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 155/242 (64%), Gaps = 8/242 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG---GDESSAMPVACALEMIHTMSLV 74
PA++HEAMRY++L GGKRVR L A+ C + G E+S A A+E+IH SLV
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE +A S I+P +V+A
Sbjct: 94 HDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLA--SMPIAPALIVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS+G+ G+ +D+ S G +S +EL+ +H KT +L +V G I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLLSVGHRLSRDELQQMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT S LGKT GKD +K TY L+G++ AR FA
Sbjct: 212 RQALDIYAQAMGLAFQVVDDILDVTADSASLGKTPGKDAAENKPTYVSLLGLDEARAFAS 271
Query: 255 DL 256
+L
Sbjct: 272 EL 273
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|376268075|ref|YP_005120787.1| geranyltranstransferase [Bacillus cereus F837/76]
gi|386738069|ref|YP_006211250.1| polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|421506438|ref|ZP_15953361.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|421638259|ref|ZP_16078855.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
gi|423550076|ref|ZP_17526403.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|364513875|gb|AEW57274.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Bacillus
cereus F837/76]
gi|384387921|gb|AFH85582.1| Polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|401189692|gb|EJQ96742.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|401823431|gb|EJT22578.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|403394685|gb|EJY91925.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
Length = 296
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 174/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +HEAMRYS L GGKR+RP+L +A+ EL +++ A+E IH SLVHDD+P
Sbjct: 30 PQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECIHVYSLVHDDMPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H FGE TA+L GDAL +LAF+ + + TE+S R +R + L A
Sbjct: 90 MDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFD-ILSTETELSTVRQLRMVKVLAQAS 148
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV-VCGVIIGGGNMIEVERVR 199
GS G+ G+ +D+ + G+D+S ELE +H KT L+ AAV + G+ N ++ +
Sbjct: 149 GSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLD 208
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQV+DD+LD + LGKTAGKD ++K TY KLMG++ AR +A L+AQ
Sbjct: 209 VYASKLGLAFQVIDDVLDCEADTATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQ 268
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F+ RA L LA ++ +R+
Sbjct: 269 AIDALQTFDT-RADHLRTLAQFVVARK 294
>gi|427402583|ref|ZP_18893580.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
gi|425718389|gb|EKU81336.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
Length = 299
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/284 (44%), Positives = 169/284 (59%), Gaps = 5/284 (1%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV +ALD + R P K+HEAMRY+ L GGKRVRP+L A+ L D ++ VA A
Sbjct: 16 RVEEALDAFLPPADRVPHKLHEAMRYTTLGGGKRVRPLLAYAAGALFDADPAALARVASA 75
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTE 123
+EMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GD L + AFE VA+ +
Sbjct: 76 VEMIHVYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDTLQAQAFEVVASLDAAA 135
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ P R + + L A GS G+ G+ +D+DS G ++ +LE +H KT +L +V+
Sbjct: 136 VPPARQLTMVRLLAQAAGSNGMCGGQAIDLDSVGLSLTREQLERMHQLKTGAMLRVSVLL 195
Query: 184 GVIIGGGNMI-EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G E+E + Y+ +GL FQVVDD+LD T S LGKTAGKD +K TY
Sbjct: 196 GALAGRDLATHELEALDAYSAAVGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVS 255
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
++G+E +R A L A E LA F +A L LA I R+
Sbjct: 256 ILGLEPSRALAEQLRRDAHEALAPFG-DKAQRLRELADLIVQRK 298
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|402776690|ref|YP_006630634.1| geranyltranstransferase [Bacillus subtilis QB928]
gi|418032399|ref|ZP_12670882.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428279913|ref|YP_005561648.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|430759106|ref|YP_007209030.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915229|ref|ZP_21963855.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
gi|251757288|sp|P54383.2|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|351471262|gb|EHA31383.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481870|gb|AFQ58379.1| Geranyltranstransferase [Bacillus subtilis QB928]
gi|407959673|dbj|BAM52913.1| geranyltranstransferase [Bacillus subtilis BEST7613]
gi|407965248|dbj|BAM58487.1| geranyltranstransferase [Bacillus subtilis BEST7003]
gi|430023626|gb|AGA24232.1| Geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115577|gb|EME05973.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
Length = 296
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 180/274 (65%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D +DK+TYP L+ +E A K
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + + L + LY L IA+R H
Sbjct: 263 LDVHIKEAKRLIGGLSLQKDLLYELCDLIAARDH 296
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 181/302 (59%), Gaps = 19/302 (6%)
Query: 4 KAKR--VNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
K KR ++ L + +Q +P ++ +A+ +SL+AGGKR+RP+L +A+ + G D A+P
Sbjct: 20 KEKRAILDDYLKKVIQELNPENELAKAIEHSLMAGGKRLRPILAMAAAQATGKDFRLALP 79
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF---EHV 117
AC++EMIHT SL+HDDLP MDNDD RRG PT HK F E TAILAGDALL+ AF H
Sbjct: 80 AACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHKAFSEATAILAGDALLTHAFTILTHN 139
Query: 118 AAKSTEISPDR--VVRAIAELGSAVGSEGLVAGEIMDIDSEGK-----------DVSLNE 164
+ P+ + + +A + A G+ G+V G++MD+ + G D L
Sbjct: 140 PRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMDMQATGFLDQHNQSKVNIDNCLAH 199
Query: 165 LENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKE 224
L+ +H KT K++ +V G + G + ++ER+ KYA +GL FQV DDIL+V
Sbjct: 200 LKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKYAGKVGLAFQVADDILNVEGDPYV 259
Query: 225 LGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIAS 284
+GK AG D +++K T+P L+G+E +R FA +L+ +A E L F PL +A YI
Sbjct: 260 MGKAAGSDAMNNKMTFPALLGLEPSRTFARNLIQEALEPLNTFNEKDILPLKAIAGYIVD 319
Query: 285 RQ 286
R+
Sbjct: 320 RK 321
>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
Length = 297
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 161/248 (64%), Gaps = 4/248 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDDLPCMD 82
+ EAM YSL AGGKR+RP+L + + GG++ M VAC++E+IHT SL+HDDLPCMD
Sbjct: 34 VLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMD 93
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGSAV 140
NDDFRRGKP+ HK F ED A+LAGDAL +LAFE + + E IS + V ++ L A+
Sbjct: 94 NDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAI 153
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G++G++ G+++D+++E + + + L + KT L+EAA V GV++ G M +
Sbjct: 154 GTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVL-SGKMEYIPAAAD 212
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YA+ +G FQ+VDDILDVT + +ELGK G D K TY L+G++ +R+ A L A
Sbjct: 213 YAQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQHKNTYVSLLGLQRSRQKAAQLTVTA 272
Query: 261 TEELAYFE 268
L FE
Sbjct: 273 LGALKNFE 280
>gi|410091965|ref|ZP_11288509.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
gi|409760708|gb|EKN45832.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
Length = 295
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 176/285 (61%), Gaps = 5/285 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P ++++AMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPTPELTRLYDAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS-TE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A + T
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPNLTS 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAQTRLQMVSTLATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + +++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGRADQTQLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G+E A+ +A +L QA L F A A PL LA YI R+H
Sbjct: 252 LLGLEAAKGYALELRDQALTALDLFSNA-AEPLRELARYIVERRH 295
>gi|395791810|ref|ZP_10471266.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
gi|395408113|gb|EJF74733.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
Length = 300
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 170/285 (59%), Gaps = 4/285 (1%)
Query: 6 KRVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KR+ + VQ + P + +AMRY +L GGKR+RP L I S L + VA
Sbjct: 17 KRLATLFSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEHTLDVA 76
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CALE +H SL+HDDLP MDND RRG+PT H F E TAILAG+ALL+ AFE +A K++
Sbjct: 77 CALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKAS 136
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
E+S + ++ I L + G G++ G+++D+++E K + + KTA L+ A
Sbjct: 137 ELSFETRIKLITALAQSAGLGGMIGGQMLDLEAEKKPQESTNIITLQRMKTAALISFACQ 196
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIG + E++ + GL FQ+ DD+LDVT S+K LGKTAGKD KAT+ +
Sbjct: 197 AGAIIGNASKELTEKLAAFGTYFGLAFQLTDDLLDVTASTKVLGKTAGKDETMHKATFIR 256
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GIE RK +L+A+A L F + +A PL A + A+R++
Sbjct: 257 LYGIEETRKKRDELIAKAEALLTPFGI-KAKPLQQAARFSATRKN 300
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 178/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD---ESSAMPVA 62
K+V K LD ++ R P I++AMRYS+ AGGKR+RP+LC+ S ++ D + + +A
Sbjct: 15 KKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDKEIDQKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH +FGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EIS-PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
+ +++A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + +Y + +GL FQ+ DD+LDV SK++GK+ GKD+ K+T+
Sbjct: 195 CVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKSTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEKAQQLVEHYSQKAIDVIKKYD--NSELLIELTNYLINRE 298
>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 183/293 (62%), Gaps = 9/293 (3%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
MT+ +RV ALD + + P +HEAMRYS+ GGKRVRP+L + + + S
Sbjct: 7 MTTYRQRVESALDTWLPMTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTGAALNVNPISL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E+IH SLVHDDLP MD+DD RRGKPT HK F E TAILAGDAL +LAF ++
Sbjct: 67 DAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFYVLS 126
Query: 119 AKST-EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + S R + I L A GS G+ G+ +D++S G+ +++ ELEN+H+HKT L+
Sbjct: 127 HDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMHIHKTGALI 186
Query: 178 EAAVVCGVIIGGGNMIEVERVRK---YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
A+V G + N+IEV ++ K YA+CIGL FQ+ DDILDV S+ LGK G D+
Sbjct: 187 RASVKMGAL--ACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVESSTTVLGKAQGADIA 244
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+K TYP L+G+ A++ A +L+ A L F+ +A PL +A YI RQ+
Sbjct: 245 HNKVTYPSLLGLNQAKQMAQELITDAITSLTNFD-QKADPLRWIAEYIIKRQY 296
>gi|386759023|ref|YP_006232239.1| geranyltranstransferase [Bacillus sp. JS]
gi|384932305|gb|AFI28983.1| geranyltranstransferase [Bacillus sp. JS]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 181/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEQDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D +DK+TYP L+ +E A++
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKRKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ +A + + + LY L IA+R H
Sbjct: 264 DAHIKEAKRLIGGLSLQQDL-LYELCDLIAARDH 296
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 182/283 (64%), Gaps = 6/283 (2%)
Query: 7 RVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
+NK L++ + + + ++++M+YS+ GGKR+RP+L +++ + + MP+ACA
Sbjct: 9 EINKWLNDYFENKGSYNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACA 68
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ A + S +
Sbjct: 69 IEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNYS--L 126
Query: 125 SPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ D+V + A + A G+EG++ G+++DI SEG+ +S+++L+ +H +KT +L++++++
Sbjct: 127 THDKVALMASKVISEAAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKSSIIA 186
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+GG + +E + ++ +GL FQ+ DDILDV SK LGK KD ++K T+
Sbjct: 187 GAILGGASKENLEILDEFGSKLGLAFQIKDDILDVIGDSKVLGKEVHKDDENNKTTFISC 246
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E ++ +L Q + L+Y L ++A ++ R+
Sbjct: 247 FGLEKCKELCVELTEQCIKLLSYIG-KDTKQLENIALFLMKRE 288
>gi|383318377|ref|YP_005379219.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
gi|379045481|gb|AFC87537.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
Length = 314
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 168/284 (59%), Gaps = 4/284 (1%)
Query: 6 KRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KR++ +LD + P ++H+A+RY+ GGKR+R +L AS E +G AC
Sbjct: 33 KRLDASLDRWLPAADTDPHRLHQAIRYAC-RGGKRLRALLVYASGEALGVPLEKLDAPAC 91
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E+IH SLVHDDLP MDNDD RRG+PT H + TAIL GDAL +LAF + +
Sbjct: 92 AVELIHAYSLVHDDLPGMDNDDLRRGQPTVHIAYDVATAILVGDALQTLAFNLLTDPANA 151
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ + V IA L A G G+V G+ +D++SEG +SL +LE++H KT L+ +
Sbjct: 152 LDARQQVAMIASLAHASGPLGMVGGQAVDMESEGASLSLEQLESLHARKTGALIRVSCEL 211
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
I G + + + +Y C+GL FQ+ DD+LD T + LGKTAGKD K+T+P L
Sbjct: 212 AAIAGAASTPVAQALARYGSCLGLAFQIQDDVLDQTADTATLGKTAGKDQAQQKSTFPSL 271
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+G++ AR+ A DL QA E+A + APL LA +I R H
Sbjct: 272 LGLDTARQRASDLFDQA-REIAIEISGQPAPLLWLADFIQKRDH 314
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 174/290 (60%), Gaps = 11/290 (3%)
Query: 4 KAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD---E 55
+A+ V LDE + P ++HEAMRY++L GGKRVR VL A+ C + G
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGSTLAVG 74
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+A I+P VV+A L A GS+G+ G+ +D+ S G+ ++ +EL+ +H KT
Sbjct: 135 LLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGA 192
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+L +V G I+ G + + + YA+ IGL FQVVDDILDVT + LGKTAGKD
Sbjct: 193 MLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAAD 252
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G++ AR A +L A + LA + A L LA +I R
Sbjct: 253 NKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/251 (46%), Positives = 158/251 (62%), Gaps = 8/251 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG---GDESSAMPVACALEMIHTMSLV 74
P+++HEAMRY++L GGKRVR L A+ C + G ++S A A+E+IH SLV
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVQASLDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMD+D RRG+PT H F E TA+LAGDAL LAF+ +A S I+P +V+A
Sbjct: 94 HDDLPCMDDDTLRRGRPTTHVKFDEATAMLAGDALQPLAFDLLA--SMPIAPALIVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS+G+ G+ +D+ S G +S +EL+ +H KT +L +V G I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLFSVGHALSRDELQTMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT S LGKT GKD +K TY L+G++ AR FA
Sbjct: 212 RQALDAYAQAVGLAFQVVDDILDVTADSTSLGKTPGKDAAENKPTYVSLLGLDGARAFAQ 271
Query: 255 DLLAQATEELA 265
+L A LA
Sbjct: 272 ELREDALAALA 282
>gi|421526793|ref|ZP_15973399.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
gi|402256901|gb|EJU07377.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
Length = 297
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 168/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELQELSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IG+ FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 NKREVLEEYADLIGIAFQVKDDILDVEGNFEDLGKPVGSDIDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
D + +A E + F + L LA +I +R
Sbjct: 262 LNDTVEKAKEIIKNKFGEEKGKILISLADFIKNRN 296
>gi|373856764|ref|ZP_09599508.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
gi|372453743|gb|EHP27210.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
Length = 297
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 154/236 (65%), Gaps = 1/236 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L P + E+M YSL AGGKR+RP+L A+ + G D + A A+EMIHT SL+HD
Sbjct: 27 KLHAPDILKESMLYSLKAGGKRIRPLLLFATLQAFGMDPRKGLYPAVAIEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-VRAIAE 135
DLP MDNDD RRGKPTNHKVFG+ AILAGD LL+ +F+ ++ + S R V I+
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGDAVAILAGDGLLTYSFQVLSEMPEQDSDVRTKVGLISL 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G+EG+V G++ DI+ EGK ++L ELE IHLHKT KLL V+ G ++ + +
Sbjct: 147 LAQAAGAEGMVGGQVADIEGEGKHLNLTELEYIHLHKTGKLLVCCVMSGALMANASKEQA 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+ +A+ +G+ FQ+ DDILD+ + + +GK G D + K TYP L+ ++ A+K
Sbjct: 207 SNLEAFAKHLGMAFQIRDDILDLEGNEELIGKPIGSDEENLKNTYPSLLTMDGAKK 262
>gi|421477013|ref|ZP_15924866.1| polyprenyl synthetase [Burkholderia multivorans CF2]
gi|400227328|gb|EJO57335.1| polyprenyl synthetase [Burkholderia multivorans CF2]
Length = 294
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 167/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ A ALEMIH SLVHDD+PC
Sbjct: 29 PARLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDAAALSPVQQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G + + +
Sbjct: 148 GSLGMAGGQAIDLASVGVKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSADTMAALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R+ A L A+
Sbjct: 208 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRAE 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A + L F ARA L LA + +R
Sbjct: 268 AHDALKPFG-ARAQRLAELADLVVNR 292
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 158/242 (65%), Gaps = 9/242 (3%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ +++E+M YSL AGGKRVRP+L +AS + D + +A A+EMIHT SL+HDDL
Sbjct: 23 NYNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDL 82
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALL----SLAFEHVAAKSTEISPDRVVRAIA 134
PCMDNDD RRG+PTNHK+FG A+LAGD LL ++ F++ K E ++A
Sbjct: 83 PCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEE-----ALKACL 137
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
+ A S+G++ G+++DI SEGK ++ +EL +H KT +L++AAVV G I+GG + +
Sbjct: 138 MISKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHD 197
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
VE + +Y +GL FQ+ DDILD+ +K +GKT+ DL +DK TY L GI+ +
Sbjct: 198 VELLSQYGDKLGLAFQIEDDILDIIGDTKIMGKTSKSDLENDKCTYVTLYGIDKCKSICR 257
Query: 255 DL 256
+L
Sbjct: 258 EL 259
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 154/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 174/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKKLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|375135831|ref|YP_004996481.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V+G+++D+ +EGK ++ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKSYA 270
Query: 254 CDLLAQATEELAYF 267
+L QA E LA+F
Sbjct: 271 KELHDQAFEALAHF 284
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 179/286 (62%), Gaps = 7/286 (2%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P ++++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK--ST 122
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A S+
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ R ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RNAATR-LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVR 190
Query: 183 CGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 191 LGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G++ A+ +A +L QA L+ F+ A PL LA YI R+H
Sbjct: 251 ALLGLDAAKGYALELRDQALAALSLFDTT-AEPLRELARYIVERRH 295
>gi|384176049|ref|YP_005557434.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595273|gb|AEP91460.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 296
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 180/274 (65%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSGEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D +DK+TYP L+ +E A K
Sbjct: 204 DIETLRAFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + + L + LY L IA+R H
Sbjct: 263 LDVHIKEAKRLIDGLSLQKDLLYELCDLIAARDH 296
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 165/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P K+HEAMRY++L GGKRVRP+LC A+ EL G E++ A ALEMIH SLVHDD+PC
Sbjct: 29 PEKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDAAALSPVQQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G E + +
Sbjct: 148 GSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETMAALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G+E +R+ A L +
Sbjct: 208 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRTE 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A + L F ARA L LA + +R
Sbjct: 268 AHDALKPFG-ARAQRLAELADLVVNR 292
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 178/288 (61%), Gaps = 13/288 (4%)
Query: 7 RVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL++ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+ +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ + L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+G+E A+++A +L QA L+ F+ A A PL LA YI R+
Sbjct: 248 TYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERR 294
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 173/290 (59%), Gaps = 11/290 (3%)
Query: 4 KAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD---E 55
+A+ V LDE + P ++HEAMRY++L GGKRVR L A+ C + G
Sbjct: 15 RAQHVEHVLDELLPGADIVPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+A I+P VV+A L A GS+G+ G+ +D+ S G+ ++ +EL+ +H KT
Sbjct: 135 LLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGA 192
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+L +V G I+ G + + + YA+ IGL FQVVDDILDVT + LGKTAGKD
Sbjct: 193 MLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAAD 252
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G+E AR A +L A + LA + A L LA +I R
Sbjct: 253 NKPTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 173/290 (59%), Gaps = 11/290 (3%)
Query: 4 KAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD---E 55
+A+ V LDE + P ++HEAMRY++L GGKRVR L A+ C + G
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+A I+P VV+A L A GS+G+ G+ +D+ S G+ ++ +EL+ +H KT
Sbjct: 135 LLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGA 192
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+L +V G I+ G + + + YA+ IGL FQVVDDILDVT + LGKTAGKD
Sbjct: 193 MLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAAD 252
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G+E AR A +L A + LA + A L LA +I R
Sbjct: 253 NKPTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|422659619|ref|ZP_16722043.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 295
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 179/286 (62%), Gaps = 7/286 (2%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P ++++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK--ST 122
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + A S+
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ R ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 132 RDAATR-LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVR 190
Query: 183 CGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 191 LGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+G++ A+ +A +L QA L+ F+ A PL LA YI R+H
Sbjct: 251 ALLGLDAAKGYALELRDQALAALSLFDTT-AEPLRELARYIVERRH 295
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 172/287 (59%), Gaps = 10/287 (3%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R +AL++ + + P ++HEAMRY++L GGKR+RP+L ++ +G E+ A A
Sbjct: 14 RTERALEQVLPPADKPPKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLDAPASA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SLVHDDLP MDNDD RRG+PT HK F E TA+L GDAL SLAF +A ++ +
Sbjct: 74 VELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTSGL 133
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
++ + L A S G+ G+ +D++S G+ ++L ELE +H KT L+ A+V+ G
Sbjct: 134 PASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVLLG 193
Query: 185 VIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ +E + ++A+CIGL FQ+ DD+LDV + LGK G D DK TYP L
Sbjct: 194 AWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDRARDKPTYPSL 253
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAY---YIASRQH 287
+G+ A+ A LL QA + L + AP HL + ++ R+H
Sbjct: 254 LGLPQAKAKAQSLLEQAHQALRAVD----APTEHLEWLADFVVQRRH 296
>gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
Length = 301
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 162/259 (62%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E +YSL+AGGKR+RP+L + E + ++A VA ALEMIHT SL+HDDLP
Sbjct: 38 PKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLP 97
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRGK TNHK F E TAILAGD L F S+++S +V EL A
Sbjct: 98 AMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPF--YVLSSSDLSAQTIVSLTRELAYA 155
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGKD++L ++E IH KT +LL V I+ E+E++R
Sbjct: 156 SGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLR 215
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+ D L++
Sbjct: 216 VVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKSTYVAHLGLEGAKISLTDKLSE 275
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 276 VKKLLTELNVTDSSEIFKI 294
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 173/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+V G++ D+ +EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 LAKAAGPEGMVGGQVADMKAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
Length = 301
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 162/259 (62%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E +YSL+AGGKR+RP+L + E + ++A VA ALEMIHT SL+HDDLP
Sbjct: 38 PKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLP 97
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRGK TNHK F E TAILAGD L F S+++S +V EL A
Sbjct: 98 AMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPF--YVLSSSDLSAQTIVSLTRELAYA 155
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGKD++L ++E IH KT +LL V I+ E+E++R
Sbjct: 156 SGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLR 215
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+ D L++
Sbjct: 216 VVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKSTYVAHLGLEGAKISLTDKLSE 275
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 276 VKKLLTELNVTDSSEIFKI 294
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 175/289 (60%), Gaps = 7/289 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VA 124
Query: 119 AKSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALL 184
Query: 178 EAAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +D
Sbjct: 185 RAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAAND 244
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 245 KPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|385838651|ref|YP_005876281.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Lactococcus
lactis subsp. cremoris A76]
gi|389854854|ref|YP_006357098.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
NZ9000]
gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
NZ9000]
gi|358749879|gb|AEU40858.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Lactococcus
lactis subsp. cremoris A76]
Length = 285
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 162/259 (62%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E +YSL+AGGKR+RP+L + E + ++A VA ALEMIHT SL+HDDLP
Sbjct: 22 PKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLP 81
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRGK TNHK F E TAILAGD L F S+++S +V EL A
Sbjct: 82 AMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPF--YVLSSSDLSAQTIVSLTRELAYA 139
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGKD++L ++E IH KT +LL V I+ E+E++R
Sbjct: 140 SGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLR 199
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+ D L++
Sbjct: 200 VVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKSTYVAHLGLEGAKISLTDKLSE 259
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 260 VKKLLTELNVTDSSEIFKI 278
>gi|417550902|ref|ZP_12201981.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
gi|417565272|ref|ZP_12216146.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|395557028|gb|EJG23029.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|400386727|gb|EJP49801.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
Length = 303
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 178/272 (65%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V+G+++D+ +EGK ++ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|421468332|ref|ZP_15916884.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|400232187|gb|EJO61823.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
Length = 294
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 167/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ A ALEMIH SLVHDD+PC
Sbjct: 29 PARLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDAAALSPVQQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G + + +
Sbjct: 148 GSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R+ A L A+
Sbjct: 208 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRAE 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A + L F ARA L LA + +R
Sbjct: 268 AHDALKPFG-ARAQRLAELADLVVNR 292
>gi|427405648|ref|ZP_18895853.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
gi|425708489|gb|EKU71528.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
Length = 291
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 167/265 (63%), Gaps = 2/265 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ +M YSL+AGGKR+RP+L +A+ + VG D + ACALEMIHT SL+HDDLP MD
Sbjct: 29 KLRASMAYSLMAGGKRLRPILLMAAADAVGADGMKFITAACALEMIHTYSLIHDDLPAMD 88
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHK++G+ AILAGDALL+LAF V + + DR +R + E+ A G+
Sbjct: 89 NDDYRRGKLTNHKIYGDGIAILAGDALLTLAFT-VILRQRGVPVDRHLRVVDEISRAAGA 147
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+++D+++E + +SL EL IH+ KT L AA+ G ++ G + ++ + YA
Sbjct: 148 EGMVGGQVLDLEAENRRISLEELRRIHMGKTGALFRAALRSGAVLAGASEEQLAALTAYA 207
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DDILDV +++++GK G D + K+TY L + AR+ A A
Sbjct: 208 DHFGLAFQITDDILDVVGNAEDIGKPVGSDEKNRKSTYVTLTSLREARELAQRTADDAVA 267
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L F AA L L Y+ R+
Sbjct: 268 ALDIFG-EEAAFLRELVTYLVHRKQ 291
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 173/254 (68%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L+ P + EAM YSL AGGKR+RP+L A+ + + + + ACALEMIHT SLVHD
Sbjct: 26 ELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHD 85
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A EIS ++ VR + E
Sbjct: 86 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLE 145
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE AV+ G I+ +
Sbjct: 146 FAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY L ++ A+ +
Sbjct: 206 EKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDE 265
Query: 256 LLAQATEELAYFEV 269
+A+A + + ++
Sbjct: 266 TIAKAKDAIGSLQL 279
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 174/269 (64%), Gaps = 2/269 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +H++M YSL+AGGKR+RP+L IA+CE GG +A+PVACA+EM+HT SLVHDDLP
Sbjct: 33 PETLHKSMSYSLMAGGKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRAIAELGS 138
MD+DD+RRGKPTNHKVFGE +AILAGDALL+ AF + A++ + +RV+ + +L
Sbjct: 93 MDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSIIQASRQFGVPAERVLSIVEDLAE 152
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G++ D++ E +L +LE IHLHKT+ L+ +++ G I G ++E +
Sbjct: 153 YAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIESL 212
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
R + IGL FQ+ DDILD+ +LGK D+ +K TYP +G++ +R+ L A
Sbjct: 213 RIFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDPSRREVERLTA 272
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A + + L +A ++ +R H
Sbjct: 273 EAKRVITEGNFNDPSRLLEIADFLMARDH 301
>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 297
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y+ L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIADLEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ + + +YA IGL FQV DDILDV + +ELGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKRKVLEEYADLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
D + +A E + F + L LA +I R
Sbjct: 262 LNDTVEKAKEIIKNKFRDEKGKVLISLADFIKDRN 296
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 156/242 (64%), Gaps = 8/242 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG---GDESSAMPVACALEMIHTMSLV 74
PA++HEAMRY++L GGKRVR L A+ C + G E+S A A+E+IH SLV
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE +A S I+P +V+A
Sbjct: 94 HDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLA--SMPIAPALIVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS+G+ G+ +D+ S G+ +S ++L+ +H KT +L +V G I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQLMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT S LGKT GKD +K TY L+G++ AR FA
Sbjct: 212 RQALDVYAQAMGLAFQVVDDILDVTADSASLGKTPGKDAAENKPTYVSLLGLDEARAFAG 271
Query: 255 DL 256
+L
Sbjct: 272 EL 273
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 174/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 155/239 (64%), Gaps = 8/239 (3%)
Query: 19 RHPAKIHE-----AMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVACALEMIHTMS 72
R AKI E +M YS++AGGKR+RP+L A E G + +A A ALE+IH+ S
Sbjct: 21 RELAKIQEPTLQKSMTYSVMAGGKRLRPLLLFAVLESTGQSIDETAFRAAGALELIHSYS 80
Query: 73 LVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRA 132
L+HDDLP MDNDD RRG+PTNHKVFGE AILAGD LL+LAFE +A + ++ ++ +
Sbjct: 81 LIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLA--TLNVTAEQRIEL 138
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
+ L A G+ G+VAG+I DI+ E K ++L +L+ +H KT L+E AV G ++
Sbjct: 139 VRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCLIEVAVAMGAVLAQLGE 198
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+E +R +A+ GL FQ+ DDILDVT ++ E+GK KD K T+P L+G+ A++
Sbjct: 199 VETTALRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAAEQKNTFPILLGMSGAQE 257
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 179/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE---SSAMPVA 62
K+V + L++ + R P I++AMRYS+ AGGKR+RP+LC+ S +++ D+ + +A
Sbjct: 15 KKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEVDQKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
++ +V+A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + ++ + +GL FQ+ DDILDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEKAQQLVEHYSQKAIDVIQKYD--NSELLIELTNYLINRE 298
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 191/289 (66%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+T++ + + L VQ L P + +M YSL AGGKR+RPVL +A G +E +
Sbjct: 9 LTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGI 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PV CA+EMIHT SL+HDDLPCMD+DD RRGKPTNHKV+GE TA+LAGDALL+ +F + +
Sbjct: 69 PVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITS 128
Query: 120 K-STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ S+ +S D+ +R + EL + G+ G+V G+ D+++E K VSL ELE IH KT KLL
Sbjct: 129 QLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHARKTGKLLT 188
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G ++ G + ++E++R+++ IG+ FQ+ DDILD+ S +++GK G D ++K+
Sbjct: 189 FSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKS 248
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ + A++ + + +A E ++ ++ + L+ L IASR H
Sbjct: 249 TYPSLLTLSGAKEKLDEHITRAKEIVSNLQLEQQL-LHGLCDLIASRDH 296
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 178/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE---SSAMPVA 62
K+V + L++ ++ R P I++AMRYS+ AGGKR+RP+LC+ S ++V D+ + +A
Sbjct: 15 KKVEENLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
D+ +V+A L A G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ V + +Y + +GL FQ+ DD+LDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+ A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLGKAQQLVEHYSKKAIDVIKKYD--NSELLIELTNYLINRE 298
>gi|376261504|ref|YP_005148224.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
gi|373945498|gb|AEY66419.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
Length = 294
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 156/241 (64%), Gaps = 4/241 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+I EAM YSLLAGGKR+RP+L +A E++ + + CA+EMIHT SL+HDDLP MD
Sbjct: 31 EIKEAMSYSLLAGGKRLRPLLALAVAEMLDKPLNEVINFGCAIEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGKPTNHKVFGE AILAGD LL++A+E + + E + +RA + A G+
Sbjct: 91 NDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDTVESNSIEKMRAAGIVAKAAGA 150
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+V G+++D+ SEGK + + L+ +H KT L++A V +I G + E E + YA
Sbjct: 151 LGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYA 210
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQ+ DDILD+ + + +GK G D +K+TY + G+E ++K LL T+
Sbjct: 211 ANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYGLEESKK----LLETVTQ 266
Query: 263 E 263
E
Sbjct: 267 E 267
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 154/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K ++L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 175/289 (60%), Gaps = 7/289 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VA 124
Query: 119 AKSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALL 184
Query: 178 EAAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +D
Sbjct: 185 RAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAAND 244
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 245 KPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
Length = 293
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 164/264 (62%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +AMRYSL AGGKR+RP+L A+ + + A ALEMIHT SL+HDDLP MDN
Sbjct: 32 LKKAMRYSLEAGGKRIRPILLFATLISLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDN 91
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKVFG+ TAILAGD LL+LAF ++ + + R V+ I G E
Sbjct: 92 DDYRRGKLTNHKVFGDATAILAGDGLLTLAFSLLSEEEALPAESR-VKLIQLFAEHAGPE 150
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+VAG+ DI++E + V+L EL IH KT LL++AV+ G II + E++ YA
Sbjct: 151 GMVAGQQADIEAEDRSVTLEELAAIHRKKTGALLKSAVLAGAIIANADAETYEKLNIYAD 210
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IG+ FQ+ DDILDV ++LGK G D + K+TYP L+ + A++ D +++A E
Sbjct: 211 NIGVAFQIADDILDVVGDEQKLGKKIGMDAIMHKSTYPGLLTLVGAQEALNDHVSRAKEA 270
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
++ + + L LA IA R H
Sbjct: 271 VSGLSLT-SNYLVELADLIAGRDH 293
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 168/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S ++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G +G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A E + F + L LA +I R+
Sbjct: 262 LNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ V+A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKAVKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K + L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 11/293 (3%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD- 54
+ +A+ + LDE + PA++HEAMRY++L GGKR+R L A+ C + G
Sbjct: 12 LQGRAQHIEAVLDECLPAADALPARLHEAMRYAVLGGGKRIRAALVYAAGQACPVNGSAV 71
Query: 55 --ESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
++S A A+E+IH SL+HDDLPCMD+D RRG+PT H F E TA+LAGDAL L
Sbjct: 72 AIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPL 131
Query: 113 AFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
AFE +A I+P VV+A L A GS G+ G+ +D+ S G+ +S +EL+ +H K
Sbjct: 132 AFELLA--DMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQTMHSMK 189
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T +L +V G I+ G + + + YA+ +GL FQVVDDILDVT S LGKT GKD
Sbjct: 190 TGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGKTPGKD 249
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G+++AR A +L A L A + L LA YI R
Sbjct: 250 AAGNKPTYVSLLGLDDARALAEELRGAAHAALTPLGDA-GSTLARLADYIVLR 301
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 179/286 (62%), Gaps = 7/286 (2%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE---SSAMPVA 62
K+V + L++ + R P I++AMRYS+ AGGKR+RP+LC+ S +++ D+ + +A
Sbjct: 15 KKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEVDQKILDIA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
A+E+IHT SL+HDDLP MDND RRGKPTNH VFGE AILAGDALL+LA E
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 123 EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAA 180
++ +V+A L + G EG++ G+++DI + G+D+ E L +HL KT++L++A+
Sbjct: 135 RCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQAS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VCG ++ G V + ++ + +GL FQ+ DDILDV SK++GK+ GKD+ K T+
Sbjct: 195 CVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIGKDIKEKKNTF 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G+E A++ +A + + ++ + L L Y+ +R+
Sbjct: 255 VTFYGLEKAQQLVEHYSQKAIDVIQKYD--NSELLIELTNYLINRE 298
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 152/230 (66%), Gaps = 1/230 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +A RYSLL GGKR+RP+L +A + + G + A+ ACALE+IHT SLVHDDLP MDN
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVTQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DDFRRGKP+ HKVF E AIL GD LL+ AFE V S ++ ++V +A L + G
Sbjct: 103 DDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKSAGGH 161
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G++AG+IMDI + + ++L+ L++IH KT L+ AV G I+ G +E ++++
Sbjct: 162 GMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQQFGN 221
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
IGL FQ++DD+LD+T S + G + DL ++K TY L+G+E A+ A
Sbjct: 222 EIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLA 271
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ V+A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKAVKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K + L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKETKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 171/273 (62%), Gaps = 11/273 (4%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP-----VACALEMIHTMSLVH 75
P+ IH A+R+S AGGKR+RPVL + + + D A+P + A+EM+HT SL+H
Sbjct: 33 PSSIHRAIRHSTFAGGKRLRPVLAMEAARTLRRDR--ALPAGVEDLGAAIEMLHTYSLIH 90
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIA 134
DDLP +DNDD RRGKPT H VFGE AILAGDAL +LA++ +A + + ++R IA
Sbjct: 91 DDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPAPATVEIIRLIA 150
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
E V EG++ G+++D++ EG + ++ IH KT L+ ++V G + G +
Sbjct: 151 EATGTV--EGMIGGQVLDLEGEGTRPTAESVDAIHRAKTGALIRVSIVTGGVYAGATPED 208
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
VER+ + R GL FQ+VDD+LD+T+ S LGKTAGKDL +DKAT+P + GIE +R+ A
Sbjct: 209 VERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAGKDLATDKATWPAVFGIEASRRDAA 268
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+ +A L + A A L +A ++ R +
Sbjct: 269 RLIDEAFAALEPYGPA-ADGLKTVARFLVERTN 300
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 167/281 (59%), Gaps = 2/281 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+ + K +D ++L + KI E+M YSLL GGKR+RPVL I + +L D + +AC L
Sbjct: 16 RHIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVL 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD RRGKPTNH V+GED AILAGD+LL+L++E + + S
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNS 133
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
+ A + G G++ G++ D+ +E K++ + L+ IH +KTAKL+ A+++
Sbjct: 134 SPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAA 193
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + + YA IG+ FQ+ DDILDV + +GK+ GKD K TYPK G
Sbjct: 194 YISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFG 253
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+E ++ + + A E++ + LA Y+ +R
Sbjct: 254 LEESKIKLKNYIDNAKREISKIDSKNIEFFVELADYVGNRN 294
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 181/287 (63%), Gaps = 5/287 (1%)
Query: 5 AKRVNKALDETVQLRHPAKIH--EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A+RV+ + + + I E+MRYS+ AGGKR+RPVL +S + P A
Sbjct: 15 AQRVDDWIRNYLTYENEQTIGLIESMRYSIFAGGKRLRPVLIYSSYGIFESYFDKVTPFA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-- 120
A+EM+HT SL+HDDLP MD+DD RRGKPTNHK+FGE TAILAGDALL+LAFE + K
Sbjct: 75 AAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDALLTLAFEIMLDKDI 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ +I + ++ A +L + G +G+V G+ DI +E K++ N L+ IH HKTA L+
Sbjct: 135 NKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLDFIHKHKTAALISYC 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G I+G + + + + ++ IGL FQ+VDDILD+T +++ELGK AG DL + KATY
Sbjct: 195 CELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELGKNAGSDLKNKKATY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P++ G+E ++ A DL+ A L + A A PL +A YI R +
Sbjct: 255 PEIYGLEKSKSIAEDLINSAINILKPYGKA-ATPLIEIANYILKRNN 300
>gi|338175922|ref|YP_004652732.1| geranylgeranyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
gi|336480280|emb|CCB86878.1| geranylgeranyl pyrophosphate synthase,chloroplastic [Parachlamydia
acanthamoebae UV-7]
Length = 305
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 152/230 (66%), Gaps = 1/230 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +A RYSLL GGKR+RP+L +A + + G + A+ ACALE+IHT SLVHDDLP MDN
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVIQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DDFRRGKP+ HKVF E AIL GD LL+ AFE V S ++ ++V +A L + G
Sbjct: 103 DDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKSAGGH 161
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G++AG+IMDI + + ++L+ L++IH KT L+ AV G I+ G +E ++++
Sbjct: 162 GMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQQFGN 221
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
IGL FQ++DD+LD+T S + G + DL ++K TY L+G+E A+ A
Sbjct: 222 EIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLA 271
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 173/268 (64%), Gaps = 3/268 (1%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
++ E+MRYSLLAGGKR+RP+L +A+ VG D +P+ LE+IHT SL+HDDLP M
Sbjct: 41 GRLSESMRYSLLAGGKRIRPILSMAALSSVGHDPEPYIPLLLPLELIHTYSLIHDDLPAM 100
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEISPDRVVRAIA-ELGSA 139
DNDD RRGKPTNH VFG+ TAILAGDALL+ AF ++ + E+S ++V A+ EL
Sbjct: 101 DNDDLRRGKPTNHVVFGDATAILAGDALLTYAFTILSDPRYDELSSEKVRLAVVRELSHG 160
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G G+V G+++D++SEG+ +SL +LE +H HKT L+ ++V G ++G E +
Sbjct: 161 SGLAGMVGGQMLDMESEGRRISLEDLEFLHRHKTGALILSSVRIGALLGEAGASEFNSLD 220
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+Y +G+ FQ+ DD+LDV + LGK A KD K TYP L+GI+ A+K A + L
Sbjct: 221 QYGESVGVAFQIADDLLDVEGDAATLGKAAQKDNNHLKNTYPALLGIDGAKKMAKEKLEA 280
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
A + ++ +A L +A YI R++
Sbjct: 281 ALDAVSGLG-EKADHLRGIARYIIERRN 307
>gi|423137069|ref|ZP_17124712.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961136|gb|EHO78779.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 297
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L + EL+ D + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNEDINKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
D + +A + + F + L LA +I R
Sbjct: 262 LNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
Length = 297
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 165/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I M Y++L GGKR+RP L + EL+ D + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
D + +A + + F + L LA +I R
Sbjct: 262 LNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 174/290 (60%), Gaps = 11/290 (3%)
Query: 4 KAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD---E 55
+A+ V LDE + P+++HEAMRY++L GGKRVR L A+ C + G
Sbjct: 15 RAQHVEHVLDELLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+A I+P VV+A L A GS+G+ G+ +D+ S G+ ++ +EL+ +H KT
Sbjct: 135 LLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGA 192
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+L +V G I+ G + + + YA+ IGL FQVVDDILDVT + LGKTAGKD
Sbjct: 193 MLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAAD 252
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G++ AR A +L A + LA + A L LA +I R
Sbjct: 253 NKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|392531890|ref|ZP_10279027.1| geranyltranstransferase [Carnobacterium maltaromaticum ATCC 35586]
Length = 293
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 161/250 (64%), Gaps = 4/250 (1%)
Query: 21 PAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
P K + EAM YS+ AGGKR+RP+L +A+ + +GG+ S + A ALE IHT SL+HDDL
Sbjct: 27 PTKGSLFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDL 86
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MD+D RRG+PTNH ++GE AILAGD LL+L FE +A + ++ + VR I L
Sbjct: 87 PAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGFELLA--KSPLTEKQKVRLILALSK 144
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G+ G+V G++ D++ E + ++L +L+NIH KT +LL+ A G +I + ++
Sbjct: 145 AAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVIVDADQETETQL 204
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
K+A +GL FQ+ DDILDV ++ ELGK G D V K+TYP L+ + A+K + LA
Sbjct: 205 VKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKKELAEELA 264
Query: 259 QATEELAYFE 268
+A LA +
Sbjct: 265 KAQTSLANLD 274
>gi|420211182|ref|ZP_14716556.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM001]
gi|394281635|gb|EJE25861.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM001]
Length = 293
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNTAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 173/285 (60%), Gaps = 5/285 (1%)
Query: 3 SKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+K + LDE + + P +H+AMRYSLL GGKRVR +LC A+ EL + + A
Sbjct: 20 AKQGHIEIVLDEALPSETTAPQVLHDAMRYSLLGGGKRVRALLCYAAAELCATNATIADA 79
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIH SLVHDD+PCMDNDD RRGKP+ HK + + TA+L GDAL SLAF+ ++
Sbjct: 80 AACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLSTP 139
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ S ++ + + L A GS G+ G+ +D+ S GK +S +ELEN+H KT L++AA
Sbjct: 140 TLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQAA 199
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+ G G ++ V YA IGL FQVVDDILDV + LGKTAGKD S+K TY
Sbjct: 200 ALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNKPTY 257
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
++G++ A+K A L A L F A L LA +I R
Sbjct: 258 VTILGLDQAKKLADQLYETAISALTPFG-NDAKRLRELAGFILHR 301
>gi|414084354|ref|YP_006993062.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
gi|412997938|emb|CCO11747.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
Length = 293
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 160/247 (64%), Gaps = 4/247 (1%)
Query: 21 PAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
P K + EAM YS+ AGGKR+RP+L +A+ + +GG+ S + A ALE IHT SL+HDDL
Sbjct: 27 PTKGSLFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDL 86
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MD+D RRG+PTNH ++GE AILAGD LL+L FE +A + ++ + VR I L
Sbjct: 87 PAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGFELLA--KSPLTEKQKVRLILALSK 144
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G+ G+V G++ D++ E + ++L +L+NIH KT +LL+ A G +I + ++
Sbjct: 145 AAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVIVDADQETETQL 204
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
K+A +GL FQ+ DDILDV ++ ELGK G D V K+TYP L+ + A+K + LA
Sbjct: 205 VKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKKELAEELA 264
Query: 259 QATEELA 265
+A LA
Sbjct: 265 KAQTSLA 271
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 173/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDGDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 140
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 121/140 (86%)
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG+PTNHKVFGEDTA+LAGDALLSLAF HVA K+ + RVVRAIAEL A+GSEGL
Sbjct: 1 LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGL 60
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
VAG+I+D+DSEG+ +SLNELE IH+HKT+ LLEAA VCG I+GGG EVE +RKYARCI
Sbjct: 61 VAGQIVDLDSEGEKISLNELEYIHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCI 120
Query: 206 GLLFQVVDDILDVTKSSKEL 225
GLLFQVVDDILDVTKSS++L
Sbjct: 121 GLLFQVVDDILDVTKSSEQL 140
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423702|ref|ZP_18913843.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699362|gb|EKU68977.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
Length = 303
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V+G+++D+ +EGK ++ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKVYA 270
Query: 254 CDLLAQATEELAYF 267
+L QA E LA+F
Sbjct: 271 KELHDQAFEALAHF 284
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 8/242 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG---GDESSAMPVACALEMIHTMSLV 74
P ++HEAMRY++L GGKRVR + A+ C + G E+S A A+E+IH SLV
Sbjct: 34 PVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMDND RRG+PT H F E TA+LAGDAL LAF+ +A S I+P +V+A
Sbjct: 94 HDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGDALQPLAFDLLA--SMPIAPALIVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS+G+ G+ +D+ S G +S +EL+ +H KT +L +V G I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT + LGKT GKD +K TY L+G+ AR FA
Sbjct: 212 RQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKPTYVSLLGLSEARAFAE 271
Query: 255 DL 256
+L
Sbjct: 272 EL 273
>gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|420163109|ref|ZP_14669856.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM095]
gi|420167915|ref|ZP_14674567.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM087]
gi|420187278|ref|ZP_14693299.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM039]
gi|420201648|ref|ZP_14707258.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM018]
gi|421606989|ref|ZP_16048239.1| geranyltranstransferase [Staphylococcus epidermidis AU12-03]
gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|394234798|gb|EJD80372.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM095]
gi|394237943|gb|EJD83429.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM087]
gi|394256257|gb|EJE01190.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM039]
gi|394271916|gb|EJE16395.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM018]
gi|406657282|gb|EKC83671.1| geranyltranstransferase [Staphylococcus epidermidis AU12-03]
Length = 293
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I M Y++L GGKR+RP L + EL+ D + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S ++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ ++ II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLSIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A + + F + L LA +I R+
Sbjct: 262 LNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|414074081|ref|YP_006999298.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. cremoris UC509.9]
gi|413974001|gb|AFW91465.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. cremoris UC509.9]
Length = 285
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 161/259 (62%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E +YSL+AGGKR+RP+L + E + ++A VA ALEMIHT SL+HDDLP
Sbjct: 22 PKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLP 81
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRGK TNHK F E TAILAGD L F S ++S +V EL A
Sbjct: 82 AMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPF--YVLSSIDLSAQTIVSLTRELAYA 139
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGKD++L ++E IH KT +LL V I+ E+E++R
Sbjct: 140 SGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLR 199
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+ D L++
Sbjct: 200 VVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKSTYVAHLGLEGAKISLTDKLSE 259
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 260 VKKLLTELNVTDSSEIFKI 278
>gi|404401538|ref|ZP_10993122.1| geranyltranstransferase [Pseudomonas fuscovaginae UPB0736]
Length = 295
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 175/285 (61%), Gaps = 5/285 (1%)
Query: 6 KRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
KRVN ALD A+++EAMRYS++ GGKRVRP+L A+CE +GG A AC
Sbjct: 11 KRVNAALDTLFVAPSAGLARLYEAMRYSVMNGGKRVRPLLVYAACEALGGKPEQANGAAC 70
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKST 122
A+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLS 130
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
++S + + ++ L A G G+V G+ +D+ S G + LE +H HKT L+EA+V
Sbjct: 131 DLSAEIRLSMVSTLAQAAGPAGMVGGQAIDLGSVGLKLDQKALETMHRHKTGALIEASVT 190
Query: 183 CGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G + E++ ++ YA+ IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 191 LGALASADAQKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+G+E A+ +A +L QA L F+ A A PL LA YI R+
Sbjct: 251 ALLGLEAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERR 294
>gi|346306460|ref|ZP_08848616.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
gi|345897834|gb|EGX67731.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
Length = 300
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 158/255 (61%), Gaps = 11/255 (4%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I EAM YSLLAGGKR+RP+L + L GG P A+EM+HT SLVHDDLP MDN
Sbjct: 36 IMEAMEYSLLAGGKRLRPMLMKETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDN 95
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD---RVVRAIAELGSAV 140
D++RRG+ T H V+GED AILAGDALL+ AFE A K+ + P+ + AI LG
Sbjct: 96 DEYRRGRKTTHVVYGEDMAILAGDALLNYAFE-TAVKAFVLEPEDSLTIGNAIRVLGEKA 154
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G G++ G+++D+ G VS + L+ I+ KT L+EAA++ G I+GG + EV+ V +
Sbjct: 155 GIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAILGGASKEEVKTVER 214
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF-------A 253
A +GL FQV DDILDVT + +ELGK D ++K TY L+GI++A+K A
Sbjct: 215 IASLVGLAFQVQDDILDVTSTQEELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
Query: 254 CDLLAQATEELAYFE 268
LL E Y E
Sbjct: 275 ISLLRTLPNENPYLE 289
>gi|357417905|ref|YP_004930925.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
gi|355335483|gb|AER56884.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
Length = 292
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 173/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
T A+RV +LD + +R P ++H AMR++ L GGKR+RP+L A+ + G DE
Sbjct: 7 FTRWAQRVEASLDAALPDPVRAPQRLHAAMRHAALGGGKRMRPLLVYAAGTMTGADEGVL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E+IH SLVHDDLP MD+D RRG+PT H F E TA+LAGDAL +LAFE V
Sbjct: 67 DAPATAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAVLAGDALQTLAFE-VL 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A S + RV + L A G G+ G+ +DID+ G+ SL L+++H KT L+
Sbjct: 126 AGSDAGAVLRVAW-LQTLAQASGVAGMCGGQALDIDATGQLQSLQALQHMHALKTGALIR 184
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V G + GG ++R+ +A+ +GL FQV DDILD+ SS+ LGKTAGKD K+
Sbjct: 185 ASVRLGALAGGVEEATLQRLDAFAQALGLAFQVRDDILDIEASSETLGKTAGKDAAQSKS 244
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+GI+ A+ L AQ E LA F ARA L L R+
Sbjct: 245 TYPALLGIDGAKAKLDALAAQMHELLAPFG-ARADALLALGELAIKRE 291
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/285 (44%), Positives = 170/285 (59%), Gaps = 6/285 (2%)
Query: 7 RVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN L+ Q AK+ EAM Y+++ GGKR+RPVL A+ E G D S A ACA
Sbjct: 15 RVNTRLEYWFAKQNTTAAKLSEAMHYAVMNGGKRLRPVLAFAAAEACGTDASLANDAACA 74
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--T 122
LEM+H+ SLVHDDLP MDND RRG PT H F E TAILAGDAL LAFE +A+ +
Sbjct: 75 LEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQCLAFEVLASSELPS 134
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+P + + I L A G+ G+ G+ +D+ + GK + L+ LE IH KT L+ AAV
Sbjct: 135 MTTPIK-LEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIHRLKTGCLIRAAVR 193
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + + + +YA +GL +QV DDILDVT + LGK G D V DKATYP+
Sbjct: 194 LGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQGADAVLDKATYPR 253
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
++G++ A+ A L QA + + F A PL LA YI +R++
Sbjct: 254 ILGLQAAQALATHLHDQALQAIQGFGDG-ATPLRALASYIVNRRY 297
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 168/264 (63%), Gaps = 2/264 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ +M YSL+AGGKR+RPVL +A+ + VG D + +PVACALEMIHT SL+HDDLP MDN
Sbjct: 30 LRASMEYSLMAGGKRLRPVLLMAAADAVGADGTKFLPVACALEMIHTYSLIHDDLPAMDN 89
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
D+ RRGKPTNH F E AILAGDALL+LAF V + ++ + ++R + E+ A G+E
Sbjct: 90 DNLRRGKPTNHVKFSEGIAILAGDALLTLAFT-VILRQKDVPAEALLRVVDEISRAAGAE 148
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ +E +++ EL +H+ KT L AA+ G I+ G + ++ + YA
Sbjct: 149 GMVGGQVLDLAAENCQITMEELRRVHMGKTGALFHAALRSGAILAGASEEQLAVLTAYAD 208
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
GL FQ+ DDILDV S++ELGK G D + K+TY L + A++ A + + +A
Sbjct: 209 HFGLAFQITDDILDVIGSAEELGKPVGSDEKNHKSTYVSLTSLAEAQELARNTVEEAVAA 268
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L F A L L Y+ +R+
Sbjct: 269 LDGFGT-EADFLRALVTYLVNRKQ 291
>gi|421697073|ref|ZP_16136649.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
gi|404560036|gb|EKA65286.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
Length = 303
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S NELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQNELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 170/288 (59%), Gaps = 6/288 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S +RV ALD + + PA +HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLERVETALDHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VA 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTSDVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184
Query: 179 AAVVCGVIIG-GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + + + Y+ +GL FQVVDDILDVT S LGKTAGKD K
Sbjct: 185 AAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGK 244
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 245 PTYVSIIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/274 (45%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TENLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D ++K+TYP L+ +E A K
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + + L + LY L IA+R H
Sbjct: 263 LDVHIKEAKRLIGGLSLQKDLLYELCDLIAARDH 296
>gi|381159562|ref|ZP_09868794.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
gi|380877626|gb|EIC19718.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
Length = 297
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 171/270 (63%), Gaps = 3/270 (1%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ PA++H+AMR+ L GGKR+RP L A+ VG ACALE+IHT SL+HDDL
Sbjct: 30 QEPARLHQAMRHGALGGGKRLRPTLAYAAASAVGVTREQIDAAACALELIHTYSLIHDDL 89
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MD+DD RRG+PT HK F E TAILAGDAL +LAF+ +A S + D +R I L
Sbjct: 90 PAMDDDDLRRGQPTCHKAFDEATAILAGDALQTLAFQWLATDSAN-TVDARIRMIEVLAR 148
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VER 197
A GS G+VAG+ +D+ SEG+ + LENIHLHKT L++A+V ++ E
Sbjct: 149 AAGSRGMVAGQALDLASEGQALDRAALENIHLHKTGALIQASVNMAALVKPETTGEQASA 208
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YARCIGL FQ+ DD+LDV ++ LGK +G+D KATYP L+GI+ A K A L+
Sbjct: 209 LDGYARCIGLAFQIQDDLLDVEGQTEVLGKQSGQDAAHHKATYPSLLGIDAAHKEAARLI 268
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L+ F+ A PL +A YI +R H
Sbjct: 269 EEAHRCLSGFDSG-ADPLRWIADYIIARDH 297
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 173/290 (59%), Gaps = 11/290 (3%)
Query: 4 KAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVGGD---E 55
+A+ V LDE + P ++HEAMRY++L GGKRVR L A+ C + G
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
+S A A+E+IH SLVHDDLPCMD+D RRG+PT H F E TA+LAGDAL LAFE
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+A I+P VV+A L A GS+G+ G+ +D+ S G+ ++ +EL+ +H KT
Sbjct: 135 LLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGA 192
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+L +V G I+ G + + + YA+ IGL FQVVDDILDVT + LGKTAGKD
Sbjct: 193 MLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAAD 252
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TY L+G++ AR A +L A + LA + A L LA +I R
Sbjct: 253 NKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 174/269 (64%), Gaps = 2/269 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + +M YSL+AGGKR+RP+L IA+CE GG +A+PVACA+EM+HT SL+HDDLP
Sbjct: 36 PETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPA 95
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRAIAELGS 138
MD+DD+RRGKPTNHKVFGE +AILAGDALL+ AF V AA+ + +RV+ + +L
Sbjct: 96 MDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDLAE 155
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G++ D++ E +L +LE IHLHKT+ L+ +++ G + G + ++E +
Sbjct: 156 YAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIESL 215
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
R + IGL FQ+ DDILD+ +LGK D+ +K TYP +G++ +R L A
Sbjct: 216 RTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERLTA 275
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A ++ A A L +A ++ +R H
Sbjct: 276 EAKRVISEGNFADPARLLEIADFLMARDH 304
>gi|417655990|ref|ZP_12305681.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
Length = 288
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 8 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 66
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 67 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 125
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 126 DSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 185
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 186 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 245
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 246 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 284
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 3/267 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRY+ L GGKRVRP+L A+ +L A A+E+IH+ SLVHDDLPC
Sbjct: 42 PGRLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLPC 101
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRG+PT H + E TA+L GD+L SLAFE +A + R + + L A
Sbjct: 102 MDDDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLAREDFGDGA-RQLEMVRLLARAS 160
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D++S GK ++ ELE +H KT L+ AAV+ G + G + E E +
Sbjct: 161 GSCGMAGGQSIDLESVGKTLNQPELELMHALKTGALIRAAVILGALCGTPLSTTEREALD 220
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
++A+ GLLFQVVDDILD T S+ LGKTAGKD ++K TY L+G+E AR+ A DL AQ
Sbjct: 221 RFAKRAGLLFQVVDDILDCTASTATLGKTAGKDAATEKPTYVSLLGLERARELAADLRAQ 280
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQ 286
A + L F R+ L L +I R+
Sbjct: 281 ALQALNLFG-ERSQRLVELTDFITRRK 306
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 177/270 (65%), Gaps = 3/270 (1%)
Query: 1 MTSKAKRVNKALDE-TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M ++ ++V ALD T L P+++ EAMRYSLLAGGKR+RP+L IA+ EL G + + M
Sbjct: 9 MAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELFGLEAADVM 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEMIHT SL+HDDLPCMD+DD RRG+PT HKV+GE A+LAGDALL+ AF +A
Sbjct: 69 PGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLTQAFALMAE 128
Query: 120 KST--EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
++ + P R VRA AEL A G+EG+V G++ D+ EG+ +L IH KT L
Sbjct: 129 QAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIHSLKTGALF 188
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G I+ G +++R+ +YA GL FQ+ DD+LDVT + GK G+D DK
Sbjct: 189 RAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGVGRDARLDK 248
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYF 267
+TY L G+E AR+ A + A EEL F
Sbjct: 249 STYVTLHGVEGARERAYQAVRLALEELEPF 278
>gi|374672903|dbj|BAL50794.1| geranyltranstransferase [Lactococcus lactis subsp. lactis IO-1]
Length = 293
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/259 (44%), Positives = 165/259 (63%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E+ +YSLLAGGKR+RP+L + E + S A VA ALEMIHT SL+HDDLP
Sbjct: 30 PTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLP 89
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRG+ TNHK F E TAILAGD L F + ++S + +V EL A
Sbjct: 90 AMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPF--FILSTADLSAEIIVALTRELAFA 147
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGK+++L E+E IH KT +LL V I+ + EVE++R
Sbjct: 148 SGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLR 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ + +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+K + L++
Sbjct: 208 QVGQILGLSFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEGAKKSLTENLSE 267
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 268 VKKLLTDLSVTDSSEIFKI 286
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 182/283 (64%), Gaps = 6/283 (2%)
Query: 7 RVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
+NK L++ + + + ++++M+YS+ GGKR+RP+L +++ + + MP+ACA
Sbjct: 7 EINKWLNDYFENKGSYNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACA 66
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDDLP MDNDD RRGKPTNHKVFGE AILAGD LL+ A + S +
Sbjct: 67 IEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNYS--L 124
Query: 125 SPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+ D++ + A + A G+EG++ G+++DI SEG+++S ++L+ +H +KT +L++++++
Sbjct: 125 THDKLALMASKVISEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIA 184
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
G I+GG + E+E + ++ +GL FQ+ DDILDV SK LGK KD ++K T+
Sbjct: 185 GAILGGASKEEIEILDEFGSKLGLAFQIKDDILDVIGDSKILGKEVHKDDENNKTTFISH 244
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
G++ ++ +L Q + L+Y L +A ++ R+
Sbjct: 245 FGLKKCKELCVELTEQCIKLLSYIS-KDTKQLKDIALFLMKRE 286
>gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
gi|417912331|ref|ZP_12556026.1| geranyltranstransferase [Staphylococcus epidermidis VCU105]
gi|417913662|ref|ZP_12557325.1| geranyltranstransferase [Staphylococcus epidermidis VCU109]
gi|418606664|ref|ZP_13169934.1| geranyltranstransferase [Staphylococcus epidermidis VCU057]
gi|418609609|ref|ZP_13172745.1| geranyltranstransferase [Staphylococcus epidermidis VCU065]
gi|418621798|ref|ZP_13184563.1| geranyltranstransferase [Staphylococcus epidermidis VCU123]
gi|418664553|ref|ZP_13226021.1| geranyltranstransferase [Staphylococcus epidermidis VCU081]
gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
gi|341651342|gb|EGS75147.1| geranyltranstransferase [Staphylococcus epidermidis VCU105]
gi|341654684|gb|EGS78422.1| geranyltranstransferase [Staphylococcus epidermidis VCU109]
gi|374406548|gb|EHQ77440.1| geranyltranstransferase [Staphylococcus epidermidis VCU065]
gi|374407440|gb|EHQ78302.1| geranyltranstransferase [Staphylococcus epidermidis VCU057]
gi|374410363|gb|EHQ81121.1| geranyltranstransferase [Staphylococcus epidermidis VCU081]
gi|374828226|gb|EHR92065.1| geranyltranstransferase [Staphylococcus epidermidis VCU123]
Length = 298
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 18 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 135
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 136 DSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 195
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 196 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 255
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 256 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 294
>gi|328952416|ref|YP_004369750.1| farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 174/267 (65%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ EAMRYSLLAGGKR+RP+LC+A+ E V G+ MPVA ALEMIHT SL+HDDLP MD
Sbjct: 31 RVVEAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVV--RAIAELGSAV 140
+DDFRRG+PT HK F E TAILAGD LL+ AFE +AA +T V + + A
Sbjct: 91 DDDFRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIARAA 150
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G +G+V G++ D+ +EG+ +L ++E IH KT LL A+V G ++GGG+ ++ +
Sbjct: 151 GYQGMVGGQMADLLAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILALTH 210
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y GL+FQ+ DD+LDV S E+GK G D + KATYP +MG+ A+ A DL+A A
Sbjct: 211 YGEKFGLIFQITDDLLDVEGESAEMGKPTGMDAIRQKATYPAVMGVAAAKNQARDLVAAA 270
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
+L F RA PL LA Y+ R+
Sbjct: 271 LVDLQPFG-ERAEPLRQLARYLLVRRQ 296
>gi|443631721|ref|ZP_21115901.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347836|gb|ELS61893.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 296
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/274 (45%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D +DK+TYP L+ +E A K
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + L + L+ L IA+R H
Sbjct: 263 LDVHINEAKRLIGGLSLQKDLLFELCDLIAARDH 296
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|425066900|ref|ZP_18470016.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|404601571|gb|EKB01963.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
Length = 307
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 176/293 (60%), Gaps = 6/293 (2%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S +RV++AL++ +Q + +AMRY L GGKR+RP L A E+ ++
Sbjct: 15 LHSAHQRVDEALNQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVYAVGEMFNVPVANL 74
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E IH SL+HDDLP MDNDD RRGKPT H FGE AILAGDAL +LAFE +A
Sbjct: 75 DVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILA 134
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +++ V IAEL +A G G+ G+ +D+D+E K + L LE IHLHKT L+
Sbjct: 135 KNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALI 194
Query: 178 EAAVVCGVIIGGGNMIEV-ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G + G +V + KYA IGL FQV DDILDV S++E GK G D +
Sbjct: 195 RAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAG 254
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVAR--AAPLYHLAYYIASRQH 287
K+TYP L+G+ A+K A +L +A + LA+ E + L LA +I R++
Sbjct: 255 KSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANFIVERKN 307
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 159/245 (64%), Gaps = 2/245 (0%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ ++EAM YS+ GGKR+RP+L + + ++ + A+ +ACA+EMIHT SL+HDDLP
Sbjct: 24 YNKSVYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIEMIHTYSLIHDDLP 83
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
CMD DD RRGKPTNHKVFG+ A+LAGD LL+ AF ++ K+ V A E+G A
Sbjct: 84 CMD-DDLRRGKPTNHKVFGDGLAVLAGDGLLNEAF-NIILKNGCQKGMTWVEAGYEIGKA 141
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G EG++ G+++D+ + K + + EL+ IH KTA L+ A+++ G I+G N + ++
Sbjct: 142 SGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAILGEANEKDTTILK 201
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
++ + +GL FQ+ DDILD+ +++LGKT GKD +K T+ K G+E +K DL +
Sbjct: 202 EFGKKLGLAFQIKDDILDIESDTRKLGKTIGKDKEQNKNTFVKFYGLEKCKKMCKDLTSS 261
Query: 260 ATEEL 264
E L
Sbjct: 262 CIELL 266
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 180/291 (61%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ A V+ AL E PA + E+M YSL AGGKR+RP+L IA+ E GG +A
Sbjct: 17 LNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAA 76
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV- 117
+PVACA+EM+HT SL+HDDLP MD+DD+RRGK TNHKV+GE AILAGDALL+ AF V
Sbjct: 77 LPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVV 136
Query: 118 -AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A + +S D ++ + EL G+ G+V G++ D+ E + ELE IHLHKTA L
Sbjct: 137 QAGRRHGVSSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHKTADL 196
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ +++ G IGG + ++E +R++ R +GL FQ+ DDILD+ ++GK D+ +
Sbjct: 197 IIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQE 256
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP +G+E +++ L A A + L + ++ L +A Y+ R H
Sbjct: 257 KVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|422646392|ref|ZP_16709525.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 177/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P +++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + + ++ YAR IGL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G++ A+ +A +L QA LA F +A PL LA YI R+H
Sbjct: 248 TYPALIGLQAAKGYALELRDQALGALADFG-PQAEPLRELARYIVERRH 295
>gi|403674867|ref|ZP_10937091.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 10304]
Length = 303
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 174/272 (63%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-----AKSTEISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + A+ V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDAQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + + ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEEALKACYTITK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|384160080|ref|YP_005542153.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|384165005|ref|YP_005546384.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|384169144|ref|YP_005550522.1| geranyltranstransferase [Bacillus amyloliquefaciens XH7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|341828423|gb|AEK89674.1| putative geranyltranstransferase [Bacillus amyloliquefaciens XH7]
Length = 296
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/274 (44%), Positives = 183/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G DE +PV CA+EMIHT SL+
Sbjct: 24 TERLDMPESLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+ D+++E K V+L ELE+IH KTAKLL +V G I+
Sbjct: 144 DELISAAGTEGMVGGQAADMEAEQKQVTLKELESIHERKTAKLLGFSVTAGAILADAPED 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
E+E++R ++ IG+ FQ+ DDILD+ +++GK G D ++K+TYP L+ +E A++
Sbjct: 204 EIEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTTNEKSTYPSLLTLEGAKEKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+++A + ++ + + L+ L IA+R H
Sbjct: 264 AHHISEAKQIVSGLSLEKEL-LHDLCDLIAARDH 296
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 168/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L + EL+ + + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNENINKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S ++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G +G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A E + F + L LA +I R+
Sbjct: 262 LNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 173/285 (60%), Gaps = 4/285 (1%)
Query: 6 KRVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KR++ L + VQ + P + +AMRY +L GGKR+RP L + S L ++ +A
Sbjct: 17 KRLDTLLSDQVQTGEIARPETLIKAMRYGVLNGGKRLRPFLVMQSAALFDIPAEHSLDIA 76
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CALE +H SL+HDDLP MDND RRGKPT H+ F E TAILAG+ALL+ AFE +A K++
Sbjct: 77 CALECVHCYSLIHDDLPAMDNDTLRRGKPTVHRAFDEATAILAGNALLTFAFEIIAHKAS 136
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ D ++ + L + G G+V G+++D+++E K + + KTA L+ A
Sbjct: 137 TLPFDTRIKLVTALAQSAGIGGMVGGQMLDLEAEKKPQESTNIITLQRMKTAALISFACQ 196
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIG + E++ + +GL FQ+ DD+LDVT S+ LGKT GKD + KAT+ +
Sbjct: 197 AGAIIGNASKEFTEKLAAFGTYLGLAFQLTDDLLDVTAKSEILGKTVGKDKTAHKATFVR 256
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L GIE +K +L+A+A E L + A+A PL A + A+R++
Sbjct: 257 LYGIEETQKKRDELIAKA-EVLLHPFGAKAKPLQQAARFSATRKN 300
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 180/291 (61%), Gaps = 4/291 (1%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T V+ AL E PA + EAM YSL AGGKR+RP+L IA+ E GG +A
Sbjct: 17 LTGTVDAVSSALTEQFPAHWSIPAVLREAMNYSLNAGGKRLRPLLVIAATEAFGGSREAA 76
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV- 117
+PVACA+EM+HT SL+HDDLP MD+DD+RRGK TNHKV+GE A+LAGDALL+ AF V
Sbjct: 77 LPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSVV 136
Query: 118 -AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ + IS D ++ + EL G+ G+V G++ D+ E + ELE IHLHKTA L
Sbjct: 137 QSGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGMTGIEELEYIHLHKTADL 196
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ +++ G IGG + ++E +R++ R +GL FQ+ DDILD+ ++GK D+ +
Sbjct: 197 IIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQE 256
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP +G+E +++ L A A + L + ++ L +A Y+ R H
Sbjct: 257 KVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|445404323|ref|ZP_21430970.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
gi|444782485|gb|ELX06386.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
Length = 303
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQNNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|350570077|ref|ZP_08938448.1| geranyltranstransferase [Neisseria wadsworthii 9715]
gi|349797362|gb|EGZ51126.1| geranyltranstransferase [Neisseria wadsworthii 9715]
Length = 297
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 11 ALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMI 68
AL+ + H P +HEAMRY+ L GGKR+RP+L +A+ EL D ++ A+EM+
Sbjct: 20 ALERVLPANHAVPNTLHEAMRYATLGGGKRLRPLLVLAASELGEADFTAVEQAMAAIEMV 79
Query: 69 HTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDR 128
H SLVHDD+P MDND RRGKPT H + E TA+L GDAL +LAF+ V ++ + R
Sbjct: 80 HVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFD-VLSRPANLPAAR 138
Query: 129 VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIG 188
++ +A L A GS G+ G+ +D+ + GK ++ ELE +H KT L+ AAV+ G +
Sbjct: 139 QLKMVAVLAKAAGSLGMAGGQAIDLANVGKAMNQAELEQMHGLKTGALIRAAVMLGALCC 198
Query: 189 GG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
N ++ R+ YA+ +GL FQV+DD+LD + LGKTAGKD +DK TY KLMG+
Sbjct: 199 PNLNDDDMVRLDGYAKKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLA 258
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+AR +A L+A A L F +AA L LA ++ +R++
Sbjct: 259 DARSYAETLVADAVSLLVPFG-GKAARLRGLAEFVTARKN 297
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 18 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 77
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ V+A +
Sbjct: 78 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKAVKACYTIAK 136
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K + L+EL +H KT L++++++ G I+G ++E +
Sbjct: 137 AAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGAILGSATYTDIELL 196
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 197 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 254
>gi|299768927|ref|YP_003730953.1| geranyltranstransferase [Acinetobacter oleivorans DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter oleivorans DR1]
Length = 303
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 167/254 (65%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A +V G+++D+ +E K ++ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATATSK--MVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYF 267
+L QA E LAYF
Sbjct: 271 KELHDQAFEALAYF 284
>gi|171464023|ref|YP_001798136.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 177/293 (60%), Gaps = 13/293 (4%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+TS + R + LD + P ++HEA+RY+ GGKR+RP+L A+ +L G++S
Sbjct: 11 VTSHSIRTEQTLDRLLDSAQTIPHRLHEAIRYAAQGGGKRIRPLLVYAAGQL--GNKSDV 68
Query: 59 MPV------ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
+PV A A+E IH SLVHDDLPCMD+D RRG+PT HK F E TA+L GDAL +
Sbjct: 69 VPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQTR 128
Query: 113 AFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
AFE +A +T +R I+ L +A GS G+ G+ +D++S GK + L L+ +H K
Sbjct: 129 AFEILA--NTNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHAMK 186
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T LL AV G I N ++ +++ Y++ +GL FQ+VDD+LD T S+ LGKTAGKD
Sbjct: 187 TGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQTLGKTAGKD 246
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
++K TY LMG++ A+K A +L A L F A A L LA + +R
Sbjct: 247 AAANKPTYVTLMGLDYAQKQAKELQEVAIASLDSFG-ASAQALKDLALLVVNR 298
>gi|407710083|ref|YP_006793947.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
gi|407238766|gb|AFT88964.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
Length = 293
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 171/291 (58%), Gaps = 12/291 (4%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S RV AL+ ET++ PAK+HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLGRVEAALEHYLPAETIE---PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARA 63
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 64 ECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF- 122
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
VA S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT
Sbjct: 123 -VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGA 181
Query: 176 LLEAAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LL AAV G + G R + Y+ +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 182 LLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAK 241
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 242 DGKPTYVSIIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + +R+ K+ E+M YS+ AGGKR+RP+L A+ + + D + A A
Sbjct: 13 KVIDESLFKEISVRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALNADPLLGVRTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHK+FG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTLAFS-ILAEDENL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I E+ + G+EG+V G+ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKTGELLIFAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|404368532|ref|ZP_10973882.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 174/288 (60%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ S K + ++D + +L +P I E M+Y++L GGKR+RP+L +++G ++ + +
Sbjct: 7 LDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEKENGI 66
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A A+EMIH+ SLVHDDLP +DNDD+RRGK T HK FGE IL GDALL+ AF +
Sbjct: 67 ASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTD 126
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
K+ + ++V+ + S G G++ G+++DI SEGK + L L+ IH +KT KL++
Sbjct: 127 KNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGKLMKL 186
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V IIG + E E + K+A IGL FQ+ DDILD+ LGK G D+ K+T
Sbjct: 187 PVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKST 246
Query: 240 YPKLMGIENARKFACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
YP L+G+ ++ + +A+A +A F V ++ L LA YI +R
Sbjct: 247 YPALIGMAESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
Length = 285
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/259 (44%), Positives = 164/259 (63%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E+ +YSLLAGGKR+RP+L + E + S A VA ALEMIHT SL+HDDLP
Sbjct: 22 PTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLP 81
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRG+ TNHK F E TAILAGD L F + ++S + +V EL A
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPF--FILSTADLSAEIIVALTRELAFA 139
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGK+++L E+E IH KT +LL V I+ + EVE++R
Sbjct: 140 SGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLR 199
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ + +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+K L++
Sbjct: 200 QVGQILGLAFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEEAKKSLTGNLSE 259
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 260 VKKLLTDLSVTDSSEIFKI 278
>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 293
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 155/228 (67%), Gaps = 1/228 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ E+M YS+ AGGKR+RP+L A+ + + D S + VA ALEMIHT SL+HDDLP MD
Sbjct: 31 KLKESMLYSVQAGGKRIRPMLVFATLQALQVDPMSGVKVATALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+G+ TAILAGDALL+LAF + A+ +S + + I ++ + G+
Sbjct: 91 NDDYRRGKWTNHKVYGDATAILAGDALLTLAFS-ILAEDENLSFETRIGLINQISFSSGA 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+++E K V+L EL +IH KT +LL AV I ++ + +R+R +A
Sbjct: 150 EGMVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
IG+ FQ+ DDILDV ++GK G D +K+TYP+L+ ++ A+
Sbjct: 210 ENIGVGFQISDDILDVIGDETKMGKKTGVDAFMNKSTYPELLTLDGAK 257
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 167/262 (63%), Gaps = 12/262 (4%)
Query: 1 MTSKAKRVNK--ALDETVQLRHPAK------IHEAMRYSLLAGGKRVRPVLCIASCELVG 52
M K +R+ K A+++ ++ P K I EAM YSLLAGGKR+RP+L + L G
Sbjct: 1 MNFKEERIGKITAIEQILKKYLPVKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFG 60
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
GDE P A+EMIHT SLVHDDLP MDNDD+RRG+ T H V+GE ILAGDALL+
Sbjct: 61 GDEELIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNF 120
Query: 113 AFEHVAAKSTEISPDRVV---RAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIH 169
AFE A K+ + P + + +A+ L G G++ G+++D+ S G+ VS L+ I+
Sbjct: 121 AFE-TAVKAFAMCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIY 179
Query: 170 LHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 229
KT+ L+E A++ G ++ G + EV+++ + A+ +G+ FQ+ DDILDVT + + LGK
Sbjct: 180 ELKTSALIECAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTSTVEVLGKPI 239
Query: 230 GKDLVSDKATYPKLMGIENARK 251
D ++K TY L+GIENA++
Sbjct: 240 HSDEKNEKTTYVTLLGIENAKE 261
>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|385830396|ref|YP_005868209.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
gi|418038343|ref|ZP_12676675.1| (2E,6E)-farnesyl diphosphate synthase [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
gi|354693354|gb|EHE93123.1| (2E,6E)-farnesyl diphosphate synthase [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 285
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/259 (44%), Positives = 164/259 (63%), Gaps = 3/259 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-MPVACALEMIHTMSLVHDDLP 79
P + E+ +YSLLAGGKR+RP+L + E + S A VA ALEMIHT SL+HDDLP
Sbjct: 22 PTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLP 81
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MDNDD+RRG+ TNHK F E TAILAGD L F + ++S + +V EL A
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPF--FILSTADLSAEIIVALTRELAFA 139
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+VAG+I+D+ EGK+++L E+E IH KT +LL V I+ + EVE++R
Sbjct: 140 SGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLR 199
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
+ + +GL FQ+ DDILDVT + ELGKT GKD++ +K+TY +G+E A+K L++
Sbjct: 200 QVGQILGLAFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEGAKKSLTGNLSE 259
Query: 260 ATEELAYFEVARAAPLYHL 278
+ L V ++ ++ +
Sbjct: 260 VKKLLTDLSVTDSSEIFKI 278
>gi|402310269|ref|ZP_10829235.1| polyprenyl synthetase [Eubacterium sp. AS15]
gi|400368721|gb|EJP21728.1| polyprenyl synthetase [Eubacterium sp. AS15]
Length = 295
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 166/281 (59%), Gaps = 2/281 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+ + K +D ++L + KI E+M YSLL GGKR+RPVL I + +L D + +AC L
Sbjct: 16 RHIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLDIACIL 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD RRGKPTNH V+GED AILAGD+LL+L++E + + S
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEILFDFLYKNS 133
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
+ A + G G++ G++ D+ +E K++ + L+ IH +KTAKL+ A+++
Sbjct: 134 SPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAA 193
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + + YA IG+ FQ+ DDILDV + +GK+ GKD K TYPK G
Sbjct: 194 YISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFG 253
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+E ++ + + A E+ + LA Y+ +R
Sbjct: 254 LEESKIKLKNYIDNAKREILKIDSKNIEFFVELADYVGNRN 294
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 165/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +HEAMRY+++ GGKRVRP+LC A+ EL G E+++ + ALEMIH SLVHDD+PC
Sbjct: 29 PGTLHEAMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDAAALSPQQQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER-VR 199
GS G+ G+ +D+ S G+ ++ +LE +H KT LL A+V G + G + R +
Sbjct: 148 GSIGMAGGQAIDLASVGQMLTREQLETMHRMKTGALLRASVRMGALAGETPTADTMRALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD ++K TY ++G++ +R+ A L A
Sbjct: 208 AYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGLDASRELAAQLRAD 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA + +R
Sbjct: 268 AHAALQPFG-ARAQRLAELADLVVNR 292
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 178/289 (61%), Gaps = 13/289 (4%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ Q P A++++AMRYS++ GGKRVRP+L A+CE +GG+ A ACA
Sbjct: 12 RVNAALESLFQAPGPELARLYDAMRYSVMNGGKRVRPLLAYAACEALGGEARDADGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF-----EHVAA 119
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF H+ +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E ++ ++ L +A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 132 RDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G + ++ ++ YAR +GL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+G++ A+ +A +L A + L F A A PL LA YI R+H
Sbjct: 248 TYPALLGLDAAKSYALELRDMALDALNPFGPA-AEPLRDLARYIVERRH 295
>gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|420165516|ref|ZP_14672207.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM088]
gi|420170229|ref|ZP_14676790.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM070]
gi|420172571|ref|ZP_14679070.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM067]
gi|420183181|ref|ZP_14689314.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM049]
gi|420194815|ref|ZP_14700612.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM021]
gi|420197399|ref|ZP_14703123.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM020]
gi|420206163|ref|ZP_14711673.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM008]
gi|420209024|ref|ZP_14714462.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM003]
gi|420216544|ref|ZP_14721750.1| geranyltranstransferase [Staphylococcus epidermidis NIH05001]
gi|420219177|ref|ZP_14724211.1| geranyltranstransferase [Staphylococcus epidermidis NIH04008]
gi|420221696|ref|ZP_14726623.1| geranyltranstransferase [Staphylococcus epidermidis NIH08001]
gi|420225714|ref|ZP_14730541.1| geranyltranstransferase [Staphylococcus epidermidis NIH06004]
gi|420227302|ref|ZP_14732074.1| geranyltranstransferase [Staphylococcus epidermidis NIH05003]
gi|420229621|ref|ZP_14734327.1| geranyltranstransferase [Staphylococcus epidermidis NIH04003]
gi|420232035|ref|ZP_14736677.1| geranyltranstransferase [Staphylococcus epidermidis NIH051668]
gi|420234679|ref|ZP_14739239.1| geranyltranstransferase [Staphylococcus epidermidis NIH051475]
gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|394235317|gb|EJD80889.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM088]
gi|394240567|gb|EJD85990.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM070]
gi|394241732|gb|EJD87141.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM067]
gi|394249644|gb|EJD94857.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM049]
gi|394263875|gb|EJE08596.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM021]
gi|394266206|gb|EJE10852.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM020]
gi|394278002|gb|EJE22319.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM008]
gi|394279252|gb|EJE23560.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM003]
gi|394290322|gb|EJE34186.1| geranyltranstransferase [Staphylococcus epidermidis NIH08001]
gi|394290875|gb|EJE34720.1| geranyltranstransferase [Staphylococcus epidermidis NIH04008]
gi|394291717|gb|EJE35506.1| geranyltranstransferase [Staphylococcus epidermidis NIH05001]
gi|394293148|gb|EJE36871.1| geranyltranstransferase [Staphylococcus epidermidis NIH06004]
gi|394297392|gb|EJE40993.1| geranyltranstransferase [Staphylococcus epidermidis NIH05003]
gi|394299387|gb|EJE42938.1| geranyltranstransferase [Staphylococcus epidermidis NIH04003]
gi|394301757|gb|EJE45211.1| geranyltranstransferase [Staphylococcus epidermidis NIH051668]
gi|394303922|gb|EJE47332.1| geranyltranstransferase [Staphylococcus epidermidis NIH051475]
Length = 293
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 149/217 (68%), Gaps = 8/217 (3%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N L+E + +++P +I+EAMRYS+LA GGKR PV+C+A CEL GGD +A
Sbjct: 311 WTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAF 370
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRG+P+NH V+G D AILAGDAL L F H+ +
Sbjct: 371 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVS 430
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ + + P+ +++R IAE+ +VGS G+ AG+ +D+ EG N ++ + K ++
Sbjct: 431 HTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL--EGAP---NSVDFVQRKKFGEMA 485
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDD 214
E + VCG +GG ++ R+R+Y R +G+L+QVVDD
Sbjct: 486 ECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDD 522
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 166/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++HEAMRY++L GGKRVRP+LC A+ EL G E++ A ALEMIH SLVHDD+PC
Sbjct: 29 PTRLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + +SP + + EL A
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL-TDADALSPVQQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE-VERVR 199
GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G + + +
Sbjct: 148 GSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R+ A L A+
Sbjct: 208 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRAE 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A + L F ARA L LA + +R
Sbjct: 268 AHDALKPFG-ARAQRLAELADLVVNR 292
>gi|398304512|ref|ZP_10508098.1| geranyltranstransferase [Bacillus vallismortis DV1-F-3]
Length = 296
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G +E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKNEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++E + V+L ELE+IH KTAKLL V G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVTAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D ++K+TYP L+ +E A K
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGA-KHK 262
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
D+ + L + L+ L IA+R H
Sbjct: 263 LDVHINEAKRLISGLSLQKELLFELCDLIAARDH 296
>gi|417647061|ref|ZP_12296910.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
gi|417659711|ref|ZP_12309311.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
gi|418605776|ref|ZP_13169083.1| geranyltranstransferase [Staphylococcus epidermidis VCU041]
gi|418613308|ref|ZP_13176322.1| geranyltranstransferase [Staphylococcus epidermidis VCU117]
gi|418616455|ref|ZP_13179380.1| geranyltranstransferase [Staphylococcus epidermidis VCU120]
gi|418625319|ref|ZP_13187972.1| geranyltranstransferase [Staphylococcus epidermidis VCU125]
gi|418627753|ref|ZP_13190323.1| geranyltranstransferase [Staphylococcus epidermidis VCU126]
gi|418629134|ref|ZP_13191648.1| geranyltranstransferase [Staphylococcus epidermidis VCU127]
gi|419769504|ref|ZP_14295598.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771695|ref|ZP_14297741.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus IS-K]
gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
gi|374401479|gb|EHQ72552.1| geranyltranstransferase [Staphylococcus epidermidis VCU041]
gi|374816243|gb|EHR80450.1| geranyltranstransferase [Staphylococcus epidermidis VCU117]
gi|374821281|gb|EHR85348.1| geranyltranstransferase [Staphylococcus epidermidis VCU120]
gi|374825461|gb|EHR89397.1| geranyltranstransferase [Staphylococcus epidermidis VCU125]
gi|374828900|gb|EHR92723.1| geranyltranstransferase [Staphylococcus epidermidis VCU126]
gi|374834565|gb|EHR98204.1| geranyltranstransferase [Staphylococcus epidermidis VCU127]
gi|383358123|gb|EID35584.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360514|gb|EID37909.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus IS-K]
Length = 298
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 18 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 76
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 135
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 136 DSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 195
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 196 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 255
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 256 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 294
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/287 (42%), Positives = 169/287 (58%), Gaps = 2/287 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + +V LD V PA++ AMRY +L GGKR+RP+L +A+ V G +A+
Sbjct: 10 MRTALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALR 69
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SL+HDD+PCMDND RRGKPT H +GE A+LAGDA+ +LAFE + +
Sbjct: 70 AACAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPE 129
Query: 121 STE--ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
T+ + P R + L A G G+ G+ +D+ GK + L+++H KT LL+
Sbjct: 130 DTDDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQ 189
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+V+ G G + + + Y IGL FQVVDDILDVT+ ++ LGKTAGKD +K
Sbjct: 190 ASVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDADQNKP 249
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY L+G+E AR+ A L AQA L A A L LA + R
Sbjct: 250 TYVSLLGLEGARERAQSLHAQAHAALERGAFADARWLATLADRVVER 296
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 176/288 (61%), Gaps = 5/288 (1%)
Query: 3 SKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
S RV+ A+ P A+++EAMRYS++ GGKRVRP+L A+CE +GG A
Sbjct: 8 SSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANG 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF +
Sbjct: 68 AACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDP 127
Query: 121 S-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ ++ S + +R + L A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 128 ALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V+ G + G E++ ++ YA+ IGL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+G+ A+++A +L QA L F+ A A PL LA YI R+
Sbjct: 248 TYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIVERR 294
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 177/292 (60%), Gaps = 11/292 (3%)
Query: 5 AKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA---M 59
A V K+L E + + P ++ E+M YSL AGGKR+RP L +A+ E V G ++A +
Sbjct: 13 AALVEKSLPEALPAEWNIPPQLRESMLYSLQAGGKRLRPALVLAAAEAVHGQAAAARHAL 72
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV-- 117
PVACA+E IHT SLVHDDLP MDNDD+RRGK TNHKVFGE AILAGDALL+ AF +
Sbjct: 73 PVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLTHAFHLIPK 132
Query: 118 AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
A+ IS + + + +L G+ G+V G+ D+ E S+ ELE IHLHKT+ L+
Sbjct: 133 VARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYIHLHKTSDLI 192
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
+V G IGG + ++E +R Y R IGL FQ+ DDILD+ K+LGK D+ K
Sbjct: 193 VFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKKTNSDVEQQK 252
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAP--LYHLAYYIASRQH 287
TYP L+GI+ ++ L +A + A E AP L +A Y+ R +
Sbjct: 253 VTYPYLIGIDESKAQVKRLTREA--KAAILEAQLDAPDKLLLIADYLVQRDY 302
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 169/254 (66%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V+G+++D+ +EGK ++ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+ S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDIISSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYF 267
+L QA E LA+F
Sbjct: 271 KELHDQAFEALAHF 284
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|424054464|ref|ZP_17791988.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425741380|ref|ZP_18859528.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|407439213|gb|EKF45738.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425492384|gb|EKU58643.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|452952719|gb|EME58146.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii MSP4-16]
Length = 303
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 149/234 (63%), Gaps = 14/234 (5%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAM 59
T+ +N+ LDE + ++HPA I+EAMRYS+LA G KR PV+C+A+CEL GGD +A
Sbjct: 40 WTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGGDRLAAF 99
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
P ACALEM+H SL+HDDLPCMD+D RRGKP+NH V+G A+LAGDAL L F H+ +
Sbjct: 100 PTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPLGFHHIVS 159
Query: 120 KS-TEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ E+ P ++R IAE+ VGS G+ AG+ +D++ S + K +
Sbjct: 160 HTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPSF-----VQEKKFGAMG 214
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGK 231
E + VCG ++GG E+E +R+Y R +G+L+Q VDDI ++E AGK
Sbjct: 215 ECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDI------TEEKNNGAGK 262
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Bermanella marisrubri]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Bermanella marisrubri]
Length = 294
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 163/265 (61%), Gaps = 1/265 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +AM YSLL GGKRVRP++ A+ + GD +A A A+EMIH SLVHDDLP MD
Sbjct: 31 RLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYSLVHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
+D+ RRG+PT H F E TAILAGDAL + AF+ + ++P + +R + L A G
Sbjct: 91 DDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRMVQTLAHASGL 150
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+ G+ +D+++ K V + L+N+HLHKT L+EA+V G + + ++ + YA
Sbjct: 151 AGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASEQQLSYLSVYA 210
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+ IGL FQV DDILDV ++ LGK G D +K TY L+G++ A++ A DL QA +
Sbjct: 211 QAIGLAFQVQDDILDVISDTRTLGKPQGSDESRNKPTYVSLLGLDGAKRKAQDLHQQARD 270
Query: 263 ELAYFEVARAAPLYHLAYYIASRQH 287
L + A +PL +A YI R +
Sbjct: 271 ALRKLD-ADTSPLEDIARYIIERTY 294
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|421503890|ref|ZP_15950835.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|400345394|gb|EJO93759.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
Length = 295
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 5/284 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RV+ AL+ Q +++EAMRYS++ GGKRVRP+L A+CE + G+ A ACA
Sbjct: 12 RVDAALEPLFQPPRAELQRLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRADGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SLVHDDLP MD+DD RRG+PT HK F E +AILAGD L SLAFE +A +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLADRRRNP 131
Query: 125 SPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
V ++ I L SA G G+V G+ +D+ S G+ + LE +H HKT L+EA+V+
Sbjct: 132 QDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRHKTGALIEASVLL 191
Query: 184 GVII-GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G + + ++ + +YAR +GL FQV DDILDV + LGKT GKD +DK TYP
Sbjct: 192 GALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTATLGKTQGKDEANDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+G++ A+ +A +L QA L F ++A PL LA YI R+
Sbjct: 252 LLGLDAAKDYALELRDQALHVLRPFG-SQAEPLRELARYIVERR 294
>gi|417908603|ref|ZP_12552360.1| geranyltranstransferase [Staphylococcus epidermidis VCU037]
gi|341655964|gb|EGS79687.1| geranyltranstransferase [Staphylococcus epidermidis VCU037]
Length = 288
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 8 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 66
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 67 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 125
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 126 DSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 185
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 186 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 245
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 246 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 284
>gi|416995849|ref|ZP_11939108.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 173/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDAAALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R+ A L +A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLDASRELAAQLRTEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|417555685|ref|ZP_12206754.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|417560169|ref|ZP_12211048.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|421198439|ref|ZP_15655604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|421455317|ref|ZP_15904661.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|421620071|ref|ZP_16061013.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|421634937|ref|ZP_16075542.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|421642165|ref|ZP_16082691.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|421647240|ref|ZP_16087659.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|421650160|ref|ZP_16090540.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|421658083|ref|ZP_16098328.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|421673934|ref|ZP_16113870.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|421692226|ref|ZP_16131878.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|421699881|ref|ZP_16139402.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|421794768|ref|ZP_16230860.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|421799478|ref|ZP_16235470.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|421804600|ref|ZP_16240507.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|424058821|ref|ZP_17796314.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|425750513|ref|ZP_18868479.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|445448908|ref|ZP_21444054.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|445456889|ref|ZP_21446148.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
gi|445488898|ref|ZP_21458441.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|395522751|gb|EJG10840.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|395565335|gb|EJG26982.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|400211555|gb|EJO42517.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|400392102|gb|EJP59149.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|404560118|gb|EKA65363.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|404571156|gb|EKA76220.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|404664759|gb|EKB32736.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|408511199|gb|EKK12849.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|408513717|gb|EKK15331.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|408516676|gb|EKK18247.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|408701307|gb|EKL46741.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|408703203|gb|EKL48605.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|408711194|gb|EKL56405.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|410385277|gb|EKP37770.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|410403124|gb|EKP55225.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|410409716|gb|EKP61641.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|410411050|gb|EKP62932.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|425486634|gb|EKU53000.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|444757365|gb|ELW81890.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|444766892|gb|ELW91146.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|444777393|gb|ELX01423.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
Length = 303
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 297
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 169/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ + + +YA IGL FQV DDILD+ + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A E + F + L LA +I +R
Sbjct: 262 LNNTVEKAKEIIKNKFGKEKGKVLISLADFIKNRN 296
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387904757|ref|YP_006335095.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387579649|gb|AFJ88364.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
Length = 294
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 174/288 (60%), Gaps = 5/288 (1%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S RV AL + + P ++HEAMRY++L GGKRVRP+LC A+ EL G E++
Sbjct: 7 MRSVLDRVEDALGHYLPADNVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAAR 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF +
Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVAL- 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ +SP + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 126 TDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR 185
Query: 179 AAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + + + YA +GL FQVVDDILDVT S LGKTAGKD +DK
Sbjct: 186 AAVRMGALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDK 245
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 246 PTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 163/269 (60%), Gaps = 4/269 (1%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ P +H+AMRY++L GGKR+RP+L A+ L G + A A+EMIH SL+HDD+
Sbjct: 33 QFPEPLHQAMRYAVLDGGKRIRPLLVFATGALFGAPVAVMTQTASAVEMIHAYSLIHDDM 92
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
PCMDND RRGKPT H FGE A+LAGDAL + AF + + V + L
Sbjct: 93 PCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQAF--IVLSKIDDDAKLVAERLRILSE 150
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVER 197
A GS G+ G+ +D+DS GK++S+++LE +H KT LL+A+V+ G + E+
Sbjct: 151 ASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLKTGALLKASVMLGAFSAKRPDPEEITA 210
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YA+ IGL FQVVDDILDVT + LGKTAGKD K TY L+G+ENA K A L
Sbjct: 211 LDAYAKAIGLAFQVVDDILDVTADTAILGKTAGKDASDHKPTYVSLLGLENAEKLAEKLR 270
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
QA E + F +A L+ LA + R+
Sbjct: 271 CQAHEAIEAFG-KKAVYLHELADLVVYRK 298
>gi|373496649|ref|ZP_09587195.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
gi|371965538|gb|EHO83038.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
Length = 295
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 174/288 (60%), Gaps = 2/288 (0%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ S K + ++D + +L +P I E M+Y++L GGKR+RP+L +++G ++ + +
Sbjct: 7 LDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEKENGI 66
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A A+EMIH+ SLVHDDLP +DNDD+RRGK T HK FGE IL GDALL+ AF +
Sbjct: 67 ASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTD 126
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
K+ + ++V+ + S G G++ G+++DI SEGK + L L+ IH +KT KL++
Sbjct: 127 KNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGKLMKL 186
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V IIG + E E + K+A IGL FQ+ DDILD+ LGK G D+ K+T
Sbjct: 187 PVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKST 246
Query: 240 YPKLMGIENARKFACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
YP L+G+ ++ + +A+A +A F V ++ L LA YI +R
Sbjct: 247 YPALIGMVESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/269 (46%), Positives = 168/269 (62%), Gaps = 3/269 (1%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P IH AM Y++ GGKR+RP+L + S ++VG D + A+PVACA+EMIH+ SLVHDDLP
Sbjct: 33 YPQVIHRAMHYAVFNGGKRLRPILVLESAQVVGKDLTRALPVACAMEMIHSYSLVHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA--AKSTEISPDRVVRAIAELG 137
MD+DD RRGKPT HKVFGE AIL GDALL+LAFE + A+ + P V + + E
Sbjct: 93 AMDDDDLRRGKPTCHKVFGEANAILTGDALLTLAFEIMTACAELPGMEPRYVAKVVRETA 152
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
AVGS G+V G+++D++ EGKD L+ +H KT L A + G ++ G ++
Sbjct: 153 RAVGSLGMVGGQVLDLELEGKDTDFFTLKTLHSKKTGALFRACLRAGALLFGVEDERLQA 212
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ +YA GL FQ+ DDILDV K GK G D K TYP L+G++ A+K A +
Sbjct: 213 LTRYAENFGLAFQITDDILDVEGDEKITGKPVGSDEKKQKVTYPSLLGMDEAKKLAKSSV 272
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQ 286
+A E L F A A L +LA Y+ R+
Sbjct: 273 EEAVESLNVFG-AEADFLRNLALYLLHRR 300
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + + ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGENALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GI+ + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIDKCNELCTEM 260
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 170/268 (63%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P IH+AM Y++ GGKR+RP++ + ++ GG+ A+PVACALEMIH+ SLVHDDLPC
Sbjct: 34 PPLIHQAMHYAIFNGGKRLRPIMVLEGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLPC 93
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TEISPDRVVRAIAELGS 138
MD+DDFRRG+PT H+VFGE A+L GDALL+ AFE ++ K+ + I PD +R IAE+
Sbjct: 94 MDDDDFRRGQPTCHRVFGEANAVLTGDALLTAAFELLSEKNSVSGIKPDTTLRVIAEIAR 153
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A GS G++ G+I+D+++EGK + L +H KT +L AA+ G I+GG + +
Sbjct: 154 ASGSRGMIGGQILDLEAEGKIIDYESLRKLHCLKTGQLFRAALRTGAIVGGIGEKGLLAL 213
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
YA GL FQ+ DDILDV + GK+ G D +K TYP L+G+E +R+ + +A
Sbjct: 214 SDYADNFGLAFQISDDILDVQGDAALTGKSMGSDARKEKNTYPSLLGLEKSRQLLEESIA 273
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQ 286
+ L F A L LA Y R+
Sbjct: 274 TCLQSLELFG-PEAEFLRQLACYTLYRK 300
>gi|336401302|ref|ZP_08582073.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
gi|336161212|gb|EGN64219.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
Length = 297
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L + EL+ D + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNEDINKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ + + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A E + F + L LA +I R
Sbjct: 262 LNNTVEKAKEIIKNKFGDEKGKILISLADFIKDRN 296
>gi|418325719|ref|ZP_12936925.1| geranyltranstransferase [Staphylococcus epidermidis VCU071]
gi|365228321|gb|EHM69506.1| geranyltranstransferase [Staphylococcus epidermidis VCU071]
Length = 288
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 8 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 66
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 67 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 125
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 126 DSVKVSIIQRLSKASGHLGMVGGQALDMESEGKSIRLENLESIHETKTGALLNFSVMAAV 185
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 186 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 245
Query: 246 IENARK-------FACDLLAQATEELAYFEVARAAPLYH 277
E A + A + L Q +++ E++ L++
Sbjct: 246 KEGAEEKLNNRQCLAMNCLNQISDQYDTSELSDIVDLFY 284
>gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
Length = 295
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 170/270 (62%), Gaps = 3/270 (1%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ P +HEAMRYS L GGKR+RP+L A+ +L +++ A+E IH SLVHDD+
Sbjct: 28 QEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDSVQAACEAAMAAVECIHVYSLVHDDM 87
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDND RRGKPT H FG+ A+L GDAL +LAF+ ++A +TE+ +R ++ + L
Sbjct: 88 PEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLAFDILSA-ATELPAERQLKMVQVLAK 146
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV-VCGVIIGGGNMIEVER 197
A GS G+ G+ +D+ + GKD+ LE +H KT L+ AAV + G+ ++ R
Sbjct: 147 ASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKTGALIRAAVQLGGLSCPQITADQLAR 206
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YA +GL FQV+DD+LD + LGKTAGKD ++K TY KLMG++ ARK+A L+
Sbjct: 207 LDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNNKPTYVKLMGLQAARKYAEQLV 266
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A ELA F+ RA L LA Y+ +R H
Sbjct: 267 REAVTELAVFD-ERAQYLRQLAEYVVARNH 295
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P+++ E+M YSL GGKR+RP+L A E VA ALEMIHT SL+HDDLP
Sbjct: 27 PSELKESMLYSLKVGGKRLRPILLFAVLESFNLAPQKGYHVAAALEMIHTYSLIHDDLPA 86
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPTNH VFGE TAILAGD+LL+ AF+ V A+ ++ ++ + I L A
Sbjct: 87 MDDDALRRGKPTNHIVFGEATAILAGDSLLTHAFK-VIAEDERLTTNQRLSLIQALSLAS 145
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G G+VAG+++D+++E K VSL +L+ IH++KT +L+E A+V G II + + ++++
Sbjct: 146 GPMGMVAGQVLDMEAEVKAVSLEQLKQIHVNKTGRLIEFAIVAGAIIAQADDEVINQLKQ 205
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
+A +GL FQ+ DDILDV S+ LGK G DLV+ K+TY L + A+ + + A
Sbjct: 206 FAYHLGLAFQIKDDILDVEGSTAVLGKNVGSDLVNGKSTYVSLTSLTEAKNMLEEEIKCA 265
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQ 286
L V+ A L + YI RQ
Sbjct: 266 KVILHNLPVSTAV-LEAITDYIKDRQ 290
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ I+ + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDKCNELCTEM 260
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 185/291 (63%), Gaps = 8/291 (2%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T + V+ ALD V P IH+AMR+SL AGGKR+RP+LC+A+ E GG +A
Sbjct: 9 LTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGGSLENA 68
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ ACA+E +HT SL+HDDLPCMD+DD RRG PT HKVFGE A+LAGDAL +L+FE VA
Sbjct: 69 LYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQALSFELVA 128
Query: 119 AK--STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ SP +V EL GS LV G++ D++ EGK + + +L IH KTA L
Sbjct: 129 QTPVTHRHSPAAMV---LELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHESKTAAL 185
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
L ++V G + + +V+ + + GL FQ++DDILDVT+++++LGK+AGKD+ S+
Sbjct: 186 LTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEKLGKSAGKDVASE 245
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K+TYP LMG++ +R A L +A + L F L+ LA Y+ R +
Sbjct: 246 KSTYPALMGLDASRDEAHRLTGKARQALEVFG-PNGHWLHQLADYLLKRDY 295
>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
Length = 297
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 168/275 (61%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y+ L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ + + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G++ ++K
Sbjct: 202 DKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMKESKKI 261
Query: 253 ACDLLAQATEEL-AYFEVARAAPLYHLAYYIASRQ 286
D + +A E + F + L LA +I +R
Sbjct: 262 LNDTVEKAKEIIKTKFGEEKGKVLISLADFIKNRN 296
>gi|399053798|ref|ZP_10742597.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|433542484|ref|ZP_20498911.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
gi|398048575|gb|EJL41047.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|432186295|gb|ELK43769.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
Length = 297
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 160/234 (68%), Gaps = 3/234 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +++E+M+YSL+AGGKR+RP+L +A E + +P A ALEMIHT SL+HDDLP
Sbjct: 29 PTQLYESMKYSLMAGGKRLRPMLVLAVLEALDKPMERGVPFAVALEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA---AKSTEISPDRVVRAIAELG 137
MD+DD RRGKP NHKVFGE TAILAGDALL+ AF ++A + ++++P V+ IAELG
Sbjct: 89 MDDDDLRRGKPANHKVFGEATAILAGDALLTRAFAYIAEAYQERSDVAPITTVKLIAELG 148
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER 197
G+ G+V G++ DI+ EGK + L +LE IH HKT LL AA+ G + + +++
Sbjct: 149 KRAGATGMVGGQMADIEGEGKQLDLEQLEFIHRHKTGDLLVAALRGGGYLAEASEAQMDA 208
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+ +Y CIGL FQ+ DDIL+V + ELGK G D +K TYP L+G+ +++
Sbjct: 209 LTRYGVCIGLAFQIQDDILNVEGDAAELGKAVGSDADREKVTYPSLLGLAESKE 262
>gi|385206458|ref|ZP_10033328.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
gi|385186349|gb|EIF35623.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
Length = 293
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 170/288 (59%), Gaps = 6/288 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S +RV AL+ + + PA +HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLERVETALEHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF VA
Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VA 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTSEVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184
Query: 179 AAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + R + Y+ +GL FQVVDDILDVT S LGKTAGKD K
Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGK 244
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 245 PTYVSIIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|418411929|ref|ZP_12985195.1| hypothetical protein HMPREF9281_00799 [Staphylococcus epidermidis
BVS058A4]
gi|410891512|gb|EKS39309.1| hypothetical protein HMPREF9281_00799 [Staphylococcus epidermidis
BVS058A4]
Length = 293
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVKQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IENARK-------FACDLLAQATEELAYFEVARAAPLYH 277
E A + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQCLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|422422024|ref|ZP_16498977.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
Length = 293
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 153/228 (67%), Gaps = 1/228 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ E+M YS+ AGGKR+RP+L A+ + + D + VA ALEMIHT SL+HDDLP MD
Sbjct: 31 KLKESMLYSVQAGGKRIRPMLVFATLQALQADPMRGVKVATALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+G+ TAILAGDALL+LAF + A+ +S + + I ++ + G+
Sbjct: 91 NDDYRRGKWTNHKVYGDATAILAGDALLTLAFS-ILAEDENLSFETRIALINQISFSSGA 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+++E K V+L EL +IH KT +LL AV I ++ + +R+R +A
Sbjct: 150 EGMVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A+
Sbjct: 210 ENIGVGFQISDDILDVIGDETKMGKKTGGDAFMNKSTYPGLLTLDGAK 257
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ I+ + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDKCNELCTEM 260
>gi|445434489|ref|ZP_21440102.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
gi|444756471|gb|ELW81016.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
Length = 303
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDTAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFFGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| polyprenyl synthetase [Dorea longicatena DSM 13814]
Length = 300
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 158/255 (61%), Gaps = 11/255 (4%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I EAM YSL+AGGKR+RP+L + L G + + P ALEMIHT SLVHDDLP MDN
Sbjct: 36 IMEAMEYSLMAGGKRLRPMLMRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDN 95
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD---RVVRAIAELGSAV 140
D++RRG+ T H V+GED ILAGDALL+ AFE A ++ E +P ++ RA++ LG
Sbjct: 96 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFE-TAFRAFETAPQESLKIGRALSVLGRKA 154
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G G++ G+++D+ G V + L+ I+ KT L+E A++ G I+GG +V +V K
Sbjct: 155 GVYGMIGGQVIDVKETGHAVPKDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEK 214
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF-------A 253
A +G+ FQ+ DDILDVT + + LGK D + K TY L+GIE A+K A
Sbjct: 215 IAHYVGIAFQIQDDILDVTSTEEVLGKPIHSDEKNQKTTYVTLLGIEQAQKRVEELSNQA 274
Query: 254 CDLLAQATEELAYFE 268
DLL Q + E Y E
Sbjct: 275 IDLLHQLSGENEYLE 289
>gi|451941188|ref|YP_007461826.1| geranyltranstransferase [Bartonella australis Aust/NH1]
gi|451900575|gb|AGF75038.1| geranyltranstransferase [Bartonella australis Aust/NH1]
Length = 300
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 169/285 (59%), Gaps = 4/285 (1%)
Query: 6 KRVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KR++ L VQ + P + +AMR+ L GGKR+RP L S L G ++ V+
Sbjct: 17 KRLDAFLSSKVQNGEISRPGALIKAMRHGALNGGKRLRPFLVTQSAALFGIPAEQSLDVS 76
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALE +H SL+HDDLP MDND RRG+PT HK F E TAILAGDALL+ AFE +A K+
Sbjct: 77 VALECVHCYSLIHDDLPAMDNDTLRRGRPTVHKAFDEATAILAGDALLTFAFEIIAHKAY 136
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV 182
+ P + I L A G G+V G+I+D+++E K + + + KTA L+ A
Sbjct: 137 TLGPQTKIDLITSLAQASGLGGMVGGQILDLEAEKKPQDYSAVITLQRMKTAALISFACK 196
Query: 183 CGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G IIG + + +++ + IGL FQ+ DD+LDVT SS LGKT GKD ++KAT
Sbjct: 197 AGAIIGKASEVLTQQLATFGTYIGLAFQITDDLLDVTASSLTLGKTTGKDKTANKATLIS 256
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L G++ +K +L+ +A EEL + A+A L A +IA+R++
Sbjct: 257 LCGVQETQKKRDELITKA-EELLHPFGAKAKILQQAARFIATRKN 300
>gi|420178217|ref|ZP_14684550.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM057]
gi|420180025|ref|ZP_14686285.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM053]
gi|420199452|ref|ZP_14705130.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM031]
gi|394246843|gb|EJD92095.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM057]
gi|394251457|gb|EJD96542.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM053]
gi|394272234|gb|EJE16703.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM031]
Length = 293
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVNIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 -------IENARKFACDLLAQATEELAYFEVARAAPLYH 277
+ N + A + L Q +++ E++ L++
Sbjct: 251 KDGAEEKLNNHQCLALNCLNQISDQYDTSELSDIVDLFY 289
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| polyprenyl synthetase [Dorea formicigenerans ATCC 27755]
Length = 300
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 157/255 (61%), Gaps = 11/255 (4%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I EAM YSLLAGGKR+RP+L + L GG P A+EM+HT SLVHDDLP MDN
Sbjct: 36 IMEAMGYSLLAGGKRLRPMLMKETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDN 95
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD---RVVRAIAELGSAV 140
D++RRG+ T H V+GED AILAGDALL+ AFE A K+ + P+ + AI LG
Sbjct: 96 DEYRRGRKTTHVVYGEDMAILAGDALLNYAFE-TAVKAFVLEPEDSMTIGNAIRVLGEKA 154
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G G++ G+++D+ G VS + L+ I+ KT L+EAA++ G I+GG + EV+ V +
Sbjct: 155 GIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVER 214
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF-------A 253
A +GL FQV DDILDV + +ELGK D ++K TY L+GI++A+K A
Sbjct: 215 IASLVGLAFQVQDDILDVISTQEELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
Query: 254 CDLLAQATEELAYFE 268
LL E Y E
Sbjct: 275 ISLLQTLPNENPYLE 289
>gi|420213978|ref|ZP_14719258.1| geranyltranstransferase [Staphylococcus epidermidis NIH05005]
gi|394283900|gb|EJE28061.1| geranyltranstransferase [Staphylococcus epidermidis NIH05005]
Length = 293
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV ++GK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKIGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IE-------NARKFACDLLAQATEELAYFEVARAAPLYH 277
E N + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQYLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|395781325|ref|ZP_10461745.1| hypothetical protein MCY_00142 [Bartonella rattimassiliensis 15908]
gi|395421439|gb|EJF87688.1| hypothetical protein MCY_00142 [Bartonella rattimassiliensis 15908]
Length = 301
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 174/286 (60%), Gaps = 5/286 (1%)
Query: 6 KRVNKALDETVQ---LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
KR+N L + +Q + P + +AMRY +L GGKR+RP L I S L ++ VA
Sbjct: 17 KRLNTLLSDQIQSGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYSLDVA 76
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CALE IH SL+HDDLP MDND RRGKPT H F E TAILAG+ALL+LAFE +A K+
Sbjct: 77 CALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGNALLTLAFEIIAHKAC 136
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDV-SLNELENIHLHKTAKLLEAAV 181
+S D ++ + L + G G++ G+++D+++E K S +++ + KTA L+ A
Sbjct: 137 VLSTDMRIKLLTSLAQSAGLGGMIGGQMLDLEAEKKSQESTDDIITLQRMKTAALISFAC 196
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G IIG + E++ + +GL FQ+ DD+LDV +++ LGKTAGKD ++ KAT
Sbjct: 197 QAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVIANTQTLGKTAGKDEIAKKATLV 256
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+L GIE +K + +A L F+ A+A PL A + A+R++
Sbjct: 257 RLYGIEETQKKRDAFIKKAEALLHPFD-AKALPLLQAARFSATRKN 301
>gi|403523640|ref|YP_006659209.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
gi|403078707|gb|AFR20286.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
Length = 268
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 163/266 (61%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ + ALEMIH SLVHDD+PC
Sbjct: 3 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 62
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + + DR + EL A
Sbjct: 63 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVAL-TDAAALPADRQAALVRELALAS 121
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER-VR 199
GS G+ G+ +D+ S G ++ + LE +H KT LL A+V G + G + R +
Sbjct: 122 GSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRALD 181
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R A L A
Sbjct: 182 AYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRAD 241
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA + +R
Sbjct: 242 AHAALEPFG-ARAQRLAELADLVVNR 266
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 163/266 (61%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ + ALEMIH SLVHDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + + DR + EL A
Sbjct: 89 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVAL-TDAAALPADRQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER-VR 199
GS G+ G+ +D+ S G ++ + LE +H KT LL A+V G + G + R +
Sbjct: 148 GSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R A L A
Sbjct: 208 AYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRAD 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA + +R
Sbjct: 268 AHAALEPFG-ARAQRLAELADLVVNR 292
>gi|169632576|ref|YP_001706312.1| geranyltranstransferase [Acinetobacter baumannii SDF]
gi|421662787|ref|ZP_16102943.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|421789739|ref|ZP_16225986.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii]
gi|408714303|gb|EKL59454.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|410397655|gb|EKP49899.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
Length = 303
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|381197476|ref|ZP_09904816.1| geranyltranstransferase [Acinetobacter lwoffii WJ10621]
Length = 303
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 173/272 (63%), Gaps = 8/272 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL-EMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A+ A E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATAHLNPNNNTAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP--DR--VVRAIAE 135
CMDND RRG+PT H +GEDTA+LAGD L S+AFE + ++ + P D+ V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDAGPVVDQGIVLKQMQI 152
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV-CGVIIGGGNMIE 194
L +A S +V G+++D+ +EGK V LENIH +KT L+ AAV+ V + G
Sbjct: 153 LATA--SSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQA 210
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ ++R+YA+ IGL FQV DDILD+ ++ LGKTAGKD +K+TYP LMG+E A+ +A
Sbjct: 211 IPKLREYAQAIGLAFQVQDDILDIISNTDVLGKTAGKDEQVEKSTYPALMGLEAAQDYAK 270
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA LAYF AA L ++ ++ +RQ
Sbjct: 271 TLHDQAFAALAYFPTDAAAELNQISQFLLARQ 302
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 148/228 (64%), Gaps = 3/228 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVACALEMIHTMSLVHDDLPCMD 82
+ ++M YSLLAGGKR+RP L IA EL+G + + ACALE+IHT SL+HDDLP MD
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD RRGKPTNH+V+G A LAGD LL+LAFE V+ + +P R+ R + EL A G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLK-APVRL-RLVQELAKAAGP 146
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+VAG+ D+ + G+++SL +L+ +H KT LL AV+ G +I ++ + +
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
GL FQ+ DDILDVT ++ E+GK KD K TYP L+G+ A+
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAK 254
>gi|386865572|ref|YP_006278520.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
gi|418397015|ref|ZP_12970765.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|418536793|ref|ZP_13102462.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|418544104|ref|ZP_13109416.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|418550945|ref|ZP_13115892.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|418556612|ref|ZP_13121236.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385350376|gb|EIF56920.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|385350773|gb|EIF57295.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|385351685|gb|EIF58151.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|385366777|gb|EIF72379.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385369579|gb|EIF74894.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|385662700|gb|AFI70122.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
Length = 285
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 163/266 (61%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ + ALEMIH SLVHDD+PC
Sbjct: 20 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 79
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + + DR + EL A
Sbjct: 80 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVAL-TDAAALPADRQAALVRELALAS 138
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER-VR 199
GS G+ G+ +D+ S G ++ + LE +H KT LL A+V G + G + R +
Sbjct: 139 GSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRALD 198
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R A L A
Sbjct: 199 AYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRAD 258
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA + +R
Sbjct: 259 AHAALEPFG-ARAQRLAELADLVVNR 283
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 165/254 (64%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE-SSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-----STEISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +EGK V+ +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R++ + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAQTYA 270
Query: 254 CDLLAQATEELAYF 267
L QA E L YF
Sbjct: 271 QTLHDQAFEALEYF 284
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 163/266 (61%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY++L GGKRVRP+LC A+ EL G E++ + ALEMIH SLVHDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H + E TA+L GDAL S AF + + + DR + EL A
Sbjct: 89 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVAL-TDAAALPADRQAALVRELALAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER-VR 199
GS G+ G+ +D+ S G ++ + LE +H KT LL A+V G + G + R +
Sbjct: 148 GSIGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRASVRMGALAGETPSGDAMRALD 207
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQVVDDILDVT S LGKTAGKD +DK TY ++G++ +R A L A
Sbjct: 208 AYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRAD 267
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A L F ARA L LA + +R
Sbjct: 268 AHAALEPFG-ARAQRLAELADLVVNR 292
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 173/269 (64%), Gaps = 2/269 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + +M YSL+AGGKR+RP+L IA+CE GG +A+PVACA+EM+HT SL+HDDLP
Sbjct: 39 PETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPA 98
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRAIAELGS 138
MD+DD+RRGKPTNHKVFGE +AILAGDALL+ AF V AA+ + +RV+ + +L
Sbjct: 99 MDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDLAV 158
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
G G+V G++ D++ E +L +LE IHLHKT+ L+ +++ G + G + ++E +
Sbjct: 159 YAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIESL 218
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
R + IGL FQ+ DDILD+ +LGK D+ +K TYP +G++ +R L A
Sbjct: 219 RTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERLTA 278
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
+A ++ A L +A ++ +R H
Sbjct: 279 EAKRVISEGNFADPTRLLEIADFLMARDH 307
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A +G++ G+++DI SE K ++L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAEVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|425073666|ref|ZP_18476772.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
gi|404594937|gb|EKA95492.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
Length = 307
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 174/293 (59%), Gaps = 6/293 (2%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S +RV++AL + +Q + +AMRY L GGKR+RP L E+ ++
Sbjct: 15 LHSAHQRVDEALKQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVYTVGEMFNVPVANL 74
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E IH SL+HDDLP MDNDD RRGKPT H FGE AILAGDAL +LAFE +A
Sbjct: 75 DVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILA 134
Query: 119 AKS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +++ V IAEL +A G G+ G+ +D+D+E K + L LE IHLHKT L+
Sbjct: 135 KNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALI 194
Query: 178 EAAVVCGVIIGGGNMIEV-ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
AAV G + G +V + KYA IGL FQV DDILDV S++E GK G D +
Sbjct: 195 RAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAG 254
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVAR--AAPLYHLAYYIASRQH 287
K+TYP L+G+ A+K A +L +A + LA+ E + L LA +I R++
Sbjct: 255 KSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANFIVERKN 307
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 168/283 (59%), Gaps = 6/283 (2%)
Query: 6 KRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+RV AL+ + + PAK+HEAMRY++L GGKRVRP+LC A+ EL G A
Sbjct: 12 ERVEAALEHYLPAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAA 71
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF V+ S
Sbjct: 72 ALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDV 129
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL AAV
Sbjct: 130 LAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRM 189
Query: 184 GVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G R + Y+ +GL FQVVDDILDVT S LGKTAGKD K TY
Sbjct: 190 GALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVS 249
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 250 IIGLDASRSLAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
gi|385835504|ref|YP_005873278.1| farnesyl diphosphate synthase [Lactobacillus rhamnosus ATCC 8530]
gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
gi|355394995|gb|AER64425.1| farnesyl diphosphate synthase [Lactobacillus rhamnosus ATCC 8530]
Length = 283
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 158/269 (58%), Gaps = 4/269 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T +N ALDE + + AM YS+ AGGKR+RP+L ++ + G + A+P
Sbjct: 5 LTDWQTAINHALDEQLATVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDGVVAEALP 64
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A ALE +HT SL+HDDLP MDNDD RRG+PTNHK FGE AILAGDALL+ AF A
Sbjct: 65 AATALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDAF----AI 120
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
++ P++ + L A GS G+VAG+++D+D E L L+ +H KT L++A
Sbjct: 121 LSQHYPEKGAALVQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAG 180
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G + + + +A GL FQ+ DDI DVTK++ ELGKTA KD+ K T+
Sbjct: 181 VAMGSLFVAIPEADQVALADFAAAFGLGFQIKDDINDVTKTTAELGKTADKDVAEHKNTF 240
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEV 269
P+L+G+ A++ QAT L V
Sbjct: 241 PELLGLAGAKQALATQFQQATAALNSLTV 269
>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|421855820|ref|ZP_16288193.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|403188653|dbj|GAB74394.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 302
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 9/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELV-GGDESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++ A A+EMIH SL HDDLP
Sbjct: 33 PEPLKSAVYHAVMLGGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDR--VVRAIAE 135
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + ++ D+ V+R +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQI 152
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV-VCGVIIGGGNMIE 194
L +A S +V G++MD+ +EGK V ++LENIH +KT L++AA+ + V I G
Sbjct: 153 LATA--SSKMVCGQVMDLQAEGKQVDQSQLENIHRNKTGALIQAAIMMAAVTIFNGTDQA 210
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ ++R+Y + IGL FQV DDILD+ ++ LGKTAGKD +K+TYP LMG+E A+ +A
Sbjct: 211 IPQLRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLEQAQLYAK 270
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA L YF A A L ++ ++ SR+
Sbjct: 271 QLHDQAFSALEYFGEA-AEELNTISRFLLSRK 301
>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|384133023|ref|YP_005515635.1| geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|384144439|ref|YP_005527149.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385238771|ref|YP_005800110.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|387122748|ref|YP_006288630.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|416148795|ref|ZP_11602556.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|417545595|ref|ZP_12196681.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|417569621|ref|ZP_12220479.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|417576287|ref|ZP_12227132.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|417868705|ref|ZP_12513711.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|417874600|ref|ZP_12519449.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|417876515|ref|ZP_12521279.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|417882534|ref|ZP_12526829.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|421202914|ref|ZP_15660059.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|421536488|ref|ZP_15982731.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|421627735|ref|ZP_16068537.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|421667881|ref|ZP_16107931.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|421672487|ref|ZP_16112442.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|421686106|ref|ZP_16125865.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|421704593|ref|ZP_16144037.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|421708370|ref|ZP_16147748.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|421792088|ref|ZP_16228246.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|421809983|ref|ZP_16245813.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|424051125|ref|ZP_17788659.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|424062285|ref|ZP_17799772.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|425754738|ref|ZP_18872590.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|445464261|ref|ZP_21449560.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
gi|445479014|ref|ZP_21455036.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|333364839|gb|EGK46853.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|342228466|gb|EGT93352.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|342232470|gb|EGT97248.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|342237516|gb|EGU01984.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|342237718|gb|EGU02176.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|347594932|gb|AEP07653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385877240|gb|AFI94335.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|395553844|gb|EJG19850.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|395569508|gb|EJG30170.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|398327635|gb|EJN43768.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|400383483|gb|EJP42161.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|404569609|gb|EKA74695.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|404666236|gb|EKB34187.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|404672328|gb|EKB40161.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|407189888|gb|EKE61110.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|407190426|gb|EKE61644.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|408710377|gb|EKL55604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|409985573|gb|EKO41783.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|410378557|gb|EKP31168.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|410381943|gb|EKP34502.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|410401058|gb|EKP53218.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|410413774|gb|EKP65589.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|425496276|gb|EKU62411.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|444774050|gb|ELW98139.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|444779702|gb|ELX03677.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
Length = 303
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA + LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFDALAHFG-ENAKELVEISQFLLAR 301
>gi|385812516|ref|YP_005848907.1| geranyltranstransferase [Lactobacillus fermentum CECT 5716]
gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 148/228 (64%), Gaps = 3/228 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVACALEMIHTMSLVHDDLPCMD 82
+ ++M YSLLAGGKR+RP L IA EL+G + + ACALE+IHT SL+HDDLP MD
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD RRGKPTNH+V+G A LAGD LL+LAFE V+ + +P R+ R + EL A G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLK-APVRL-RLVQELAKAAGP 146
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+VAG+ D+ + G+++SL +L+ +H KT LL AV+ G +I ++ + +
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
GL FQ+ DDILDVT ++ E+GK KD K TYP L+G+ A+
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAK 254
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 163/272 (59%), Gaps = 6/272 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES---SAMPVACALEMIHTMSLVHDD 77
PA+IHEAMRYS LAGGK +RPVL +A+ VGG E+ + A A+E++HT SL+HDD
Sbjct: 38 PARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDD 97
Query: 78 LPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA-EL 136
LP MD+D RRG+P NH VFGE AILAGDALL+LAFE +A + V A+A EL
Sbjct: 98 LPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEEL 157
Query: 137 GSAVGSEGLVAGEIMDIDS-EGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
A G+ GL+ G++ D+D+ +G + L L++IH KT L A V G + G E+
Sbjct: 158 ARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAGEGEL 217
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
E + YA G FQ+VDDILDVT ELGK G D K T P L+G+E AR+ A +
Sbjct: 218 EALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVGLERARRLAAE 277
Query: 256 LLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L RAA L LA + R+
Sbjct: 278 ATERAVASLDPLG-DRAALLAWLARSLLERRR 308
>gi|384462224|ref|YP_005674819.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 152/238 (63%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ KI+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ ++A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALKACYTIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K +SL+EL + K L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGAILGSATYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|421484057|ref|ZP_15931629.1| geranyltranstransferase [Achromobacter piechaudii HLE]
gi|400197764|gb|EJO30728.1| geranyltranstransferase [Achromobacter piechaudii HLE]
Length = 303
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 154/242 (63%), Gaps = 8/242 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIAS---CELVG---GDESSAMPVACALEMIHTMSLV 74
P ++HEAMRY++L GGKRVR + A+ C + G E+S A A+E+IH SLV
Sbjct: 34 PVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLPCMD+D RRG+PT H F E TA+LAGDAL LAF+ +A S I+P +V+A
Sbjct: 94 HDDLPCMDDDTLRRGQPTTHVKFDEATAMLAGDALQPLAFDLLA--SMPIAPALIVQATQ 151
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIE 194
L A GS+G+ G+ +D+ S G+ +S ++L+ +H KT +L +V G I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLLSVGRSLSRDDLQTMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ + YA+ +GL FQVVDDILDVT + LGKT GKD +K TY L+G+ AR FA
Sbjct: 212 RQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKPTYVSLLGLSEARAFAD 271
Query: 255 DL 256
+L
Sbjct: 272 EL 273
>gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
Length = 297
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 166/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L EL+ + + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVILELLNENINKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S ++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G+E ++K
Sbjct: 202 DKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 253 ACDLLAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
+ + +A E + F + L LA +I R
Sbjct: 262 LNNTVKKAKEIIKDKFGDEKGKILISLADFIKDRN 296
>gi|429205318|ref|ZP_19196595.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
gi|428146390|gb|EKW98629.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
Length = 294
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 168/270 (62%), Gaps = 4/270 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE-SSA 58
M+++ ++ +A+D+ + L+ P+K+ EAMRYSL AGGKR+RP+L +A E G+ ++
Sbjct: 8 MSNRIDQLEQAMDQYLATLQAPSKLKEAMRYSLDAGGKRIRPLLTLAFKEYFTGEVVTTD 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ VA +EMIHT SL+HDDLP MDNDD RRGKPTNHKVFG+ A+LAGD LL+ AFE +
Sbjct: 68 IDVAACIEMIHTYSLIHDDLPEMDNDDLRRGKPTNHKVFGQAMAVLAGDGLLTTAFERLT 127
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P +V +L A G++G+V G++ DI E K ++L EL+ +H KT LL+
Sbjct: 128 TIS--LAPAVIVELTHKLALAAGAQGMVGGQVGDILGEQKQLTLAELQMVHEGKTGALLQ 185
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A G I+ E V + GL FQ+ DDI DV ++ ++GK KD +K
Sbjct: 186 YACEAGAILAAQPPTVKEIVAHFGLNFGLAFQIYDDIQDVVSTTAKMGKKVHKDQAHNKN 245
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFE 268
TYP L+G+ A++ ++A +L E
Sbjct: 246 TYPGLLGLAGAQEHLTKMVAICRSDLLQLE 275
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 171/291 (58%), Gaps = 12/291 (4%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S RV AL+ ET++ PAK+HEA+RY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLGRVEAALEHYLPAETIE---PAKLHEAVRYAVLGGGKRVRPLLCHAAGELTGARA 63
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 64 ECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF- 122
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
VA S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT
Sbjct: 123 -VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGA 181
Query: 176 LLEAAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LL AAV G + G R + Y+ +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 182 LLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAK 241
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K TY ++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 242 DGKPTYVSIIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 180/295 (61%), Gaps = 9/295 (3%)
Query: 1 MTSKAKRVNKALDETVQLRHP------AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD 54
+ S K K ++E ++ P ++ A +YSL AGGKR+RP+LC+ASCE+VGGD
Sbjct: 8 LESYLKERGKKVEEILEKYFPKEEGYGKRVISAGKYSLFAGGKRIRPILCLASCEVVGGD 67
Query: 55 ESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF 114
+ A +E IHT SL+HDDLPCMD+DDFRRGKP+ HK F E TAILAGD L +LAF
Sbjct: 68 WRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHKAFDEATAILAGDGLQALAF 127
Query: 115 EHVAAKS--TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHK 172
+ + ++++AI + A+G EG+V G+++D+ EGK + L+ IHL+K
Sbjct: 128 QFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMVDLLMEGKKGNPRILKWIHLNK 187
Query: 173 TAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKD 232
T +L+EA+V+ G I+GG E++ + Y + +G FQ+VDD+LD+ K+LGK D
Sbjct: 188 TVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVDDLLDILGDEKKLGKKTFSD 247
Query: 233 LVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ K TYP L GIE ++ A +A L FE + A PL +A ++ R H
Sbjct: 248 VKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEKS-ALPLKAIAEFVLYRVH 301
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 173/291 (59%), Gaps = 11/291 (3%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S +RV AL ETV PA++HEAMRY++L GGKRVRP+LC A+ EL G E
Sbjct: 7 MRSVLERVETALGHYLPAETVA---PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASE 63
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
++ + ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 64 AALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFV 123
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+ + + DR + EL A GS G+ G+ +D+ S G ++ + LE +H KT
Sbjct: 124 AL-TDAAALPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGA 182
Query: 176 LLEAAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LL A+V G + G + R + YA +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 183 LLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAA 242
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+DK TY ++G++ +R A L A A L F ARA L LA + +R
Sbjct: 243 NDKPTYVSIIGLDASRALAAQLRADAHAALEPFG-ARAQRLAELADLVVNR 292
>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
gi|150273035|gb|EDN00192.1| polyprenyl synthetase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 312
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 165/243 (67%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
A +++AM YSLLAGGKR+RPVL + +C + GGD ++A+P ACA+EM+HT SL+HDDLPCM
Sbjct: 48 ADLYDAMLYSLLAGGKRIRPVLALETCRMCGGDVTTALPFACAVEMVHTYSLIHDDLPCM 107
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D+DD RRG+PTNHKV+GE TA+LAGDALL+ AFE +A T +SP+R + A A LG A G
Sbjct: 108 DDDDLRRGQPTNHKVYGEATAVLAGDALLTAAFETIAEHGTSLSPERALAASACLGRAAG 167
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
+ G+V G+ +D+ EG +SL+ELE + KT L+ AA G I+ GG E VR+Y
Sbjct: 168 ARGMVGGQALDMAGEGHSLSLSELEELQRLKTGALISAATEIGCIVAGGGEKERAAVRRY 227
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A+ +GL FQ+ DD+LDV LGK G D ++K T+ L G+E K + A
Sbjct: 228 AQLLGLAFQIRDDMLDVEGDEATLGKPIGSDAANEKVTFVSLKGMEACEKLVSEKTEAAK 287
Query: 262 EEL 264
E L
Sbjct: 288 EAL 290
>gi|441504643|ref|ZP_20986636.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
gi|441427742|gb|ELR65211.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
Length = 303
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 165/264 (62%), Gaps = 4/264 (1%)
Query: 5 AKRVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A+R N+ L E + + A + +AM++ L GGKR RP L A+ E++G A
Sbjct: 18 AERNNQRLAEWLAAQPFADQPLIKAMKHGTLLGGKRARPFLTYATGEMLGASSEELDTPA 77
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS- 121
A+E IH SL+HDDLP MD+D+ RRG+PT H F E TAILAGD+L +LAFE +A+
Sbjct: 78 AAVECIHAYSLIHDDLPAMDDDNLRRGQPTCHIAFDEATAILAGDSLQTLAFEILASGPL 137
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
+E V+ IAEL A GS G+ G+ +D+++EGK VSL +LENIH HKT L+ A+
Sbjct: 138 SEHGEKYRVKMIAELAQASGSAGMCMGQALDLEAEGKQVSLEQLENIHKHKTGALIRCAI 197
Query: 182 VCGVI-IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G + +G + + ++ +YA IGL FQV DDILDVT ++ LGK G DL +K+TY
Sbjct: 198 RLGALAVGDKGVTVLPQLNQYADAIGLAFQVQDDILDVTSDTETLGKPQGSDLELEKSTY 257
Query: 241 PKLMGIENARKFACDLLAQATEEL 264
P L+G+E AR A L +A + L
Sbjct: 258 PALLGLEGARVKAQQLYKEALQAL 281
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 171/269 (63%), Gaps = 7/269 (2%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGGACAVELIHAYSLVHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV---VRAIAELGSA 139
+DD RRG+PT HK F E AILAGD L SLAFE +A E +P +R A L A
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA--QAEHNPQDATLRLRMFAVLARA 148
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERV 198
G G+V G+ +D+ S G + N LE +H HKT L+EA+V G + G + + +
Sbjct: 149 AGPAGMVGGQAIDLGSVGLKLDRNALELMHRHKTGALIEASVQLGALASGHADADNLASL 208
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L
Sbjct: 209 SQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRD 268
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
QA L F+ A A PL LA YI R++
Sbjct: 269 QALHALRPFDTA-AEPLRELARYIVERRN 296
>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
Length = 289
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 174/270 (64%), Gaps = 12/270 (4%)
Query: 4 KAKRVNKALD---ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA-M 59
K K++ +A+ E + P I EA+ YS+ GGKRVRP++ + E G + A
Sbjct: 3 KVKKIGQAIHRYYEQKDIVSPDLI-EAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHY 61
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
VA ALEMIHT SL+HDDLP MDNDD+RRG+ TNHK F E TAILAGD+L ++ VA
Sbjct: 62 DVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVA- 120
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ E+S + V IAEL A G+ G+V G+++D++ E + +SL+EL+ IH +KT KLL
Sbjct: 121 -NAELSAEVKVALIAELAHASGTYGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTF 179
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
VV I+ G ++ +RK IGL FQV DDILDVT S +E+GKT KDL++DKAT
Sbjct: 180 PVVAAGIVAGLAGEDINNLRKAGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADKAT 239
Query: 240 YPKLMGIENARKFACDLLAQA-TEELAYFE 268
YP L+G+E + D+L ++ E LA F+
Sbjct: 240 YPSLLGLEK----SYDILNESLNEALAIFQ 265
>gi|421466128|ref|ZP_15914814.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
gi|400203639|gb|EJO34625.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
Length = 302
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 175/272 (64%), Gaps = 9/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELV-GGDESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++ A A+EMIH SL HDDLP
Sbjct: 33 PEPLKSAVYHAVMLGGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDR--VVRAIAE 135
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + ++ D+ V+R +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQI 152
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV-VCGVIIGGGNMIE 194
L +A S +V G++MD+ +EGK V ++LENIH +KT L++AA+ + V I G
Sbjct: 153 LATA--SSKMVCGQVMDLQAEGKQVDQSQLENIHCNKTGALIQAAIMMAAVTIFKGTDQA 210
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ ++R+Y + IGL FQV DDILD+ ++ LGKTAGKD +K+TYP LMG+E A+ +A
Sbjct: 211 IPQLRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLEQAQLYAK 270
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA L YF A A L ++ ++ SR+
Sbjct: 271 QLHDQAFSALEYFGEA-AEELNTISQFLLSRK 301
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 167/268 (62%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +HEAMRY L GGKR+RP+L +A+ EL D+++ A+EM+H SLVHDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H + E TA+L GDAL + AF+ V ++ T + +R + ++ L A
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAKAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ + GK ++ +LE +H KT L+ AA V G + + +V +
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRTLD 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQV+DD+LD + LGKTAGKD +DK TY KLMG++ AR +A L A+
Sbjct: 212 NYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQTARAYAETLTAE 271
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
AT L F A+A L LA ++ +R++
Sbjct: 272 ATALLEPFG-AKALRLNQLAQFVTARKN 298
>gi|421656213|ref|ZP_16096523.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
gi|408506161|gb|EKK07876.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
Length = 303
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG++ A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLKQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|377809783|ref|YP_005005004.1| farnesyl-diphosphate synthase [Pediococcus claussenii ATCC BAA-344]
gi|361056524|gb|AEV95328.1| farnesyl-diphosphate synthase [Pediococcus claussenii ATCC BAA-344]
Length = 299
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 159/250 (63%), Gaps = 6/250 (2%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGD-ESSAMPVAC 63
K +N +D+ ++ + MRYSL AGGKR+RP L +A +GG +S A
Sbjct: 11 KMLNHFMDQKIESDSLNNDLRTMMRYSLEAGGKRIRPALFLAVVRSLGGTINTSTYTTAM 70
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
ALE++HT SL+HDDLP MDNDD RRGK T+HK FGE AIL GDALL+ F+ + T+
Sbjct: 71 ALEVLHTYSLIHDDLPAMDNDDLRRGKLTSHKKFGEAQAILTGDALLTYTFQLLT--DTD 128
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
++ + +A G++G++AG++ DI SL+EL+ +HL+KT +L+ AV
Sbjct: 129 FDGKQIKELVHLFATAAGADGMIAGQLEDILGNNIQYSLSELKQLHLNKTGRLISLAVET 188
Query: 184 GVIIGGGNMIEVER--VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G+++ N+ E R +++ R GL FQ+ DDILDVTK+SKELGKTA KD+ +K TY
Sbjct: 189 GIVVSNSNISEELRSWYKEFGRNFGLAFQIFDDILDVTKTSKELGKTANKDVSLNKNTYV 248
Query: 242 KLMGIENARK 251
++G++ A+K
Sbjct: 249 SILGLDGAKK 258
>gi|392553125|ref|ZP_10300262.1| geranyltranstransferase [Pseudoalteromonas spongiae UST010723-006]
Length = 296
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 163/266 (61%), Gaps = 2/266 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ A RYSLL GGKR+RP+L + EL D + +ACA+E IH+ SLVHDDLP MD
Sbjct: 32 KLVAACRYSLLNGGKRLRPILVYLTGELFNADNADLDRIACAIECIHSYSLVHDDLPAMD 91
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP-DRVVRAIAELGSAVG 141
+D+ RRG+PT H + E TAIL GDAL LAFE + + + ++ + L +A G
Sbjct: 92 DDELRRGRPTCHIAYDEATAILVGDALQCLAFETITESQFNCTTVNNQLKIVNTLANASG 151
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+ G+ +DI + ++L +LE +H KT LL++A+ G + G N +E+ + +Y
Sbjct: 152 LLGMCGGQALDIAATDSVITLTQLEQVHKLKTGALLKSAIKMGALAGNANELEIAALARY 211
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A IGL FQV DDILDV + LGK G D+ ++KATYP L+GIE A++ A +L+ QA
Sbjct: 212 AEAIGLAFQVQDDILDVEGDTHTLGKPQGSDIEANKATYPALLGIEGAKEKAQNLVNQAI 271
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
+ L+ + A L +A YI +R H
Sbjct: 272 DALSEID-ADTGRLKAIAEYIIARDH 296
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 170/290 (58%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALD---ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS 57
M ++ + +NK +D E + E ++Y L AGGKR+RP+L +CEL GD
Sbjct: 7 MNARLEEINKTIDNVFEKSNIELENSFIEMLKYPLDAGGKRLRPILTCLACELFEGDYKK 66
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
++ A +LE+IHT SLVHDDLP MDNDD RRGKPT H +GE AIL GD LL+ AF+ +
Sbjct: 67 SIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTYAFQLL 126
Query: 118 AAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ T++ + + + EL A G G+V G+ +D+ E K+++ + L+ +H KT ++
Sbjct: 127 S--KTDVKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVLHAKKTGAMI 184
Query: 178 EAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AV G I N ++E + KYA +GL FQ+ DDILDV ++ LGKT GKD K
Sbjct: 185 RGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVGKDEKEGK 243
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAP-LYHLAYYIASRQ 286
TY K G+E A+K A + +A E L ++ + A L LA YI R+
Sbjct: 244 LTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIERK 293
>gi|374301291|ref|YP_005052930.1| farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
Length = 298
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 168/266 (63%), Gaps = 1/266 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ +M YSLLAGGKR+RPVLC+ +L G D AMP A +LE+IHT SL+HDDLP
Sbjct: 31 PERLLTSMEYSLLAGGKRLRPVLCLKWAKLCGLDMEKAMPFAASLELIHTYSLIHDDLPA 90
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDD RRGKP+NHK F E TAILAGD LL+ AF +A + + +RVV A+ + +A
Sbjct: 91 MDNDDLRRGKPSNHKQFDEATAILAGDGLLTEAFSLMAQAAESLPAERVVCAMKAVAAAA 150
Query: 141 GSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+ G+V G+ +D++ GK +SL++L+ +H KT L+ A + G ++ G +E+
Sbjct: 151 GAGGMVGGQALDMEYTGKAGISLDQLQTMHAMKTGALIRVACLSGAMLAGSKASVLEKAS 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
Y IG+ FQ+ DDILDV + +E+GK G D + K TYP L+G+ + + A + +
Sbjct: 211 TYGAAIGVAFQIADDILDVVGNEQEIGKPVGSDEQAGKNTYPSLVGLAESHRLARLYVDR 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A E L + + A L LA+YI R
Sbjct: 271 AVECLEEYSTSEADFLRQLAFYIVER 296
>gi|398852079|ref|ZP_10608748.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
gi|398244955|gb|EJN30487.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
Length = 295
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 173/284 (60%), Gaps = 5/284 (1%)
Query: 7 RVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
RVN AL+ P A+++EAMRYS++ GGKRVRP+L A+CE +GG A ACA
Sbjct: 12 RVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTE 123
+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF + + ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSD 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
S D ++ + L A G G+V G+ +D+ S G + LE +H HKT L+E +V
Sbjct: 132 CSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTGALIEVSVKL 191
Query: 184 GVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G E+ ++ YA+ IGL FQV DDILDV + LGK G D+ DK TYP
Sbjct: 192 GALASGRAEPDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+G++ A+ +A +L QA L F+ A A PL LA YI R+
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERR 294
>gi|424905505|ref|ZP_18329008.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
gi|390928398|gb|EIP85802.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 288
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 173/291 (59%), Gaps = 11/291 (3%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S +RV AL ETV PA++HEAMRY++L GGKRVRP+LC A+ EL G E
Sbjct: 1 MRSVLERVETALGHYLPAETVA---PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASE 57
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
++ + ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 58 AALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFV 117
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+ + + DR + EL A GS G+ G+ +D+ S G ++ + LE +H KT
Sbjct: 118 AL-TDAAALPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGA 176
Query: 176 LLEAAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LL A+V G + G + R + YA +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 177 LLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAA 236
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+DK TY ++G++ +R A L A A L F ARA L LA + +R
Sbjct: 237 NDKPTYVSIIGLDASRALAAQLRADAHAALEPFG-ARAQRLAELADLVVNR 286
>gi|421838068|ref|ZP_16272058.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
gi|409739634|gb|EKN40262.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
Length = 262
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 151/233 (64%), Gaps = 1/233 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDLP MDN
Sbjct: 1 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 60
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ V+A + A G +
Sbjct: 61 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKAVKACYTIAKAAGVD 119
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G++ G+++DI SE K + L+EL +H +T L++A+++ G I+G ++E + +Y
Sbjct: 120 GMIGGQVVDILSEDKSIPLDELYYMHKKRTGALIKASILAGAILGSATYTDIELLGEYGD 179
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 180 NLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 232
>gi|284048214|ref|YP_003398553.1| polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
Length = 291
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 170/286 (59%), Gaps = 2/286 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ S+ VN L + + + + +AM YS+ AGGKR+RP+L +A+ + VG S +
Sbjct: 7 LRSRGALVNGYLQVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAADAVGAKGSDFVA 66
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VA LEMIHT SL+HDDLP MDNDD+RRG+ TNHKVFG+ A+LAGD LL+ AFE V +
Sbjct: 67 VAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDGLLTQAFE-VMLE 125
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ P ++ + + G G+V G+ +DI SE + ++L +++ +H KT + AA
Sbjct: 126 QRGVDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKLHEAKTGAMFVAA 185
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V G ++GG + + + +A GL FQ+ DDILDV +K +GK A D K+TY
Sbjct: 186 VRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAKVMGKPAHSDEKLHKSTY 245
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L G+E AR+ A L +A E LA +A PL + Y+ +R+
Sbjct: 246 VSLFGLEKAREMAAQTLKEAEETLAPLG-EKAQPLVEITRYLYNRK 290
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 168/283 (59%), Gaps = 6/283 (2%)
Query: 6 KRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+RV AL+ + + PAK+HEAMRY++L GGKRVRP+LC A+ EL G A
Sbjct: 12 ERVEAALEHYLPAESTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAA 71
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF V+ S
Sbjct: 72 ALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDV 129
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL AAV
Sbjct: 130 LAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRM 189
Query: 184 GVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
G + G R + Y+ +GL FQVVDDILDVT S LGKTAGKD K TY
Sbjct: 190 GALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVS 249
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 250 IIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|386047015|ref|YP_005965347.1| geranyltranstransferase [Listeria monocytogenes J0161]
gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|345534006|gb|AEO03447.1| geranyltranstransferase [Listeria monocytogenes J0161]
Length = 293
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 164/247 (66%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + R+ ++ E+M YS+ AGGKR+RP+L A+ + + + + A A
Sbjct: 13 KVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFS-ILAEDDNL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I ++ + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|389809734|ref|ZP_10205456.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
gi|388441633|gb|EIL97895.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
Length = 299
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 176/293 (60%), Gaps = 10/293 (3%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ S +R +ALD + + P ++H AMRY++L GGKR+RP+L A+ +G D
Sbjct: 11 LQSLIERAEQALDRHLPPAGQSPTELHRAMRYAVLGGGKRLRPLLVYATAHALGEDGPQL 70
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF---- 114
ACA+E+IH SLVHDDLP MD+D RRG+PT H VFGE AILAGDAL +LAF
Sbjct: 71 DAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFGILA 130
Query: 115 EHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
E A ++ + ++RA LG A G+EG+ G+ +D+ + G+ ++L ELE++H KT
Sbjct: 131 EDAARRTDAATGIAMLRA---LGHACGAEGMAGGQALDLAAVGQTLTLGELEHMHACKTG 187
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
L+ A+V G + G + ++ + +YA +GL FQV DDILDV S +GKTAGKD
Sbjct: 188 ALIRASVQLGALAAGTDEGTLQALDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAA 247
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ K T+P ++G++ +R +L A A RA L LA Y A R++
Sbjct: 248 AAKPTFPSIIGLDASRARLAELTDTALAAFAPLG-DRAVLLEELARYAAHRRY 299
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 169/281 (60%), Gaps = 1/281 (0%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACA 64
++V AL+ V PA + +AMRY +L GGKR+RP+L +++ E VG D +A+ AC+
Sbjct: 15 EQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRAACS 74
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E+IH SL+HDD+PCMD+D RRGKPT H FG+ A+LAGDA+ +LAFE + + +
Sbjct: 75 VELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGDAMQALAFEVLTPEDDSV 134
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
R L A G +G+ G+ +D+ S G+ + L ++H KT LL+A+V+ G
Sbjct: 135 PLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLSDMHRRKTGALLQASVMMG 194
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
G + + + +Y +GL FQVVDDILDVT++S LGKTAGKD +K TY ++
Sbjct: 195 AACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAGKDADQNKPTYVTVL 254
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G+ A++ A L QA LA + AA L LA + R
Sbjct: 255 GLSAAQRRAQTLREQAQAALARSGLPDAAWLSVLADKVVER 295
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361767|ref|ZP_12962414.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686883|gb|EHI51473.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 296
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/270 (45%), Positives = 159/270 (58%), Gaps = 9/270 (3%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +AMRY LL GGKRVRP L A E++G A A+E IH SL+HDDLP MD
Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV----VRAIAELGS 138
NDD RRG+PT HK F E TAILAGDAL +LAF +A PDR+ VR ++ L
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPL---PDRLLANRVRMLSTLAR 147
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVER 197
A G G+ G+ +D+ +EG+ +SL ELE +H HKT L+E AV G + + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVALGALCKADVDDTTLAA 207
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
++ YA IGL FQV DDILD+T + LGK G DL +K+TYP L+G++NAR+ A +L
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTVTLGKPQGSDLAQEKSTYPALLGLDNARELARELH 267
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L L A YI R H
Sbjct: 268 GKALTALQSLPY-NTDILEAFADYIIERTH 296
>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AB900]
gi|421678341|ref|ZP_16118226.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
gi|410392528|gb|EKP44889.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
Length = 303
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 10/272 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILD+T +++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSNTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+L QA E LA+F A L ++ ++ +R
Sbjct: 271 KELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|401565678|ref|ZP_10806501.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
gi|400185582|gb|EJO19809.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
Length = 291
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 170/266 (63%), Gaps = 2/266 (0%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
A + +M YSL+AGGKR+RP+L +A+ + VG D + +PVA ALEMIHT SL+HDDLP M
Sbjct: 28 ATLRASMSYSLMAGGKRLRPILLMAAADAVGADGTKFLPVAAALEMIHTYSLIHDDLPAM 87
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D+D+ RRGKPTNH V+G+ AILAGDALL+LAF V + ++ + ++R + E+ A G
Sbjct: 88 DDDELRRGKPTNHVVYGDGIAILAGDALLTLAFS-VILRQKDVHAEALLRVVDEISRAAG 146
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
+EG+V G+++D+ +E + +++ EL +H+ KT L AA+ G I+ G ++ + Y
Sbjct: 147 AEGMVGGQVLDLMAEDRQITMEELRRVHMGKTGALFHAALRSGAILAGATEEQLAALTAY 206
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A GL FQ+ DDILDV +++++GK G D + K+TY L + A++ A + A
Sbjct: 207 ADHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLAEAQELARRTVEDAE 266
Query: 262 EELAYFEVARAAPLYHLAYYIASRQH 287
L+ F + A L L Y+ +R+
Sbjct: 267 AALSVFG-SEADFLRQLVAYLVNRKQ 291
>gi|450007420|ref|ZP_21827774.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NMT4863]
gi|449186393|gb|EMB88227.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NMT4863]
Length = 289
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 164/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A++ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIEHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKTLARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|398827728|ref|ZP_10585931.1| geranylgeranyl pyrophosphate synthase [Phyllobacterium sp. YR531]
gi|398219026|gb|EJN05523.1| geranylgeranyl pyrophosphate synthase [Phyllobacterium sp. YR531]
Length = 305
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 162/271 (59%), Gaps = 1/271 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
++ P ++ AMR+ +L GGKR+RP L + S L G D S+A+ VA ALE IH+ SLVHD
Sbjct: 36 EITRPPRLLAAMRHGVLNGGKRLRPFLVMESAALFGADNSAALRVAAALECIHSYSLVHD 95
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP MDNDD RRG+PT H+ F E AILAGD+LL+ AFE +A++ TEIS V I EL
Sbjct: 96 DLPAMDNDDLRRGQPTVHRKFDEAAAILAGDSLLTYAFELIASEETEISAQARVSLITEL 155
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
A G G+ G+ +D+++E + + KT L+ A G IIG ++ + E
Sbjct: 156 ARAAGIGGMTGGQTLDLEAEKVKPDEQGIIQLQAMKTGALIRFACESGSIIGNASLQDRE 215
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
R+ +Y IGL FQ+ DD+LDVT + +GK GKD + KAT + GIE ++ L
Sbjct: 216 RLAEYGSAIGLAFQLADDLLDVTSDAGNMGKATGKDAAAGKATLVSIHGIEWTKRQLSGL 275
Query: 257 LAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ QA L F ++A L A +IA R++
Sbjct: 276 VEQAQLLLEPFG-EQSALLKEAARFIAERKN 305
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 171/266 (64%), Gaps = 3/266 (1%)
Query: 4 KAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
K K V+ AL V +P KI EAMRYSL AGGKR+RP+L +A+ + +GG S + V
Sbjct: 9 KGKIVDHALAAFVPSENVYPPKIFEAMRYSLFAGGKRLRPILLMAAADSIGGKGSDYLNV 68
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
AC LEMIHT SL+HDDLP MD+DD+RRGK T+HKVFGE AILAGD LL+ AF + A+
Sbjct: 69 ACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAFTVMLAQP 128
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
+ D +++ I E+ +A G+ G++ G+++D+ SEG+ + ++ L +H KT L +AAV
Sbjct: 129 G-VQADVLIKVIGEISNAAGALGMIGGQVIDLSSEGEKIDIDTLSYMHQAKTGALFQAAV 187
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G + GG ++ + +YA+ GL FQ+ DDILDVT + +++GK G D+ + KATY
Sbjct: 188 RAGAQLAGGAEWQIASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDVKNHKATYV 247
Query: 242 KLMGIENARKFACDLLAQATEELAYF 267
L + A+ A + A + L F
Sbjct: 248 TLYSLGKAQDMANQAVTNALQALKQF 273
>gi|386265885|ref|YP_005829377.1| geranyltranstransferase [Haemophilus influenzae R2846]
gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
Length = 296
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 172/286 (60%), Gaps = 8/286 (2%)
Query: 6 KRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
R+N L+ + H A + +AM+Y+LL GGKRVRP L A+ +++G ++ S VA
Sbjct: 13 NRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQSLDYVAA 72
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+
Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
IS ++ + + L G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+
Sbjct: 132 ISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKL 191
Query: 184 GVIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TY
Sbjct: 192 GFICSPHFTDKKLE-QSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTY 250
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
PKL+G+ A++ A DL A EL A L LA ++ +R+
Sbjct: 251 PKLLGLSGAKQKAQDLYQSALSELEKIPFNTTA-LRALAEFVITRK 295
>gi|423713466|ref|ZP_17687726.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423507|gb|EJF89702.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 300
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 174/294 (59%), Gaps = 8/294 (2%)
Query: 1 MTSKAKRVNKALD-------ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 53
+ + + V K LD E ++ P + +AMRY +L GGKR+RP L I S L
Sbjct: 8 LATHGRSVEKRLDGLLNNKIENGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDI 67
Query: 54 DESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA 113
++ VACALE +H SL+HDDLP MDND RRG+PT HK F E TAILAG+ALL+ A
Sbjct: 68 PPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHKAFDEATAILAGNALLTFA 127
Query: 114 FEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKT 173
FE +A K+ +S + ++ I L + G G++ G+++DI++E + + KT
Sbjct: 128 FEIIAHKAFALSFETRIKLITALAQSAGLGGMIGGQMLDIEAEKTPQESTNIMTLQRMKT 187
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A L+ A G II + E++ + +GL FQ+ DD+LDVT SS++LGKTAGKD
Sbjct: 188 AALISFACQAGAIISNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASSEDLGKTAGKDE 247
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ KAT+ +L GI+ +K +L+A+A E L + +A PL A++ +R++
Sbjct: 248 TAQKATFVRLYGIKETQKKRDELIAKA-ESLLHSFGEKAKPLQQAAHFSVTRKN 300
>gi|422418964|ref|ZP_16495919.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
Length = 293
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 153/228 (67%), Gaps = 1/228 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ E+M YS+ AGGKR+RP+L A+ + + D + VA ALEMIHT SL+HDDLP MD
Sbjct: 31 KLKESMLYSVQAGGKRIRPMLVFATLQALQVDPMRGVKVATALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+G+ TAILAGDALL+LAF + A+ +S + + I ++ + G+
Sbjct: 91 NDDYRRGKWTNHKVYGDATAILAGDALLTLAFS-ILAEDENLSFETRIGLINQISFSSGA 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+++E K V+L EL +IH KT +LL AV I ++ + +R+R +A
Sbjct: 150 EGMVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A+
Sbjct: 210 ENIGIGFQISDDILDVIGDETKMGKKTGVDAFMNKSTYPGLLTLDGAK 257
>gi|187921415|ref|YP_001890447.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 170/288 (59%), Gaps = 6/288 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M S +RV AL+ + + PA +HEAMRY++L GGKRVRP+LC A+ EL G
Sbjct: 7 MRSVLERVETALEYYLPTEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF V+
Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VS 124
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
S ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT LL
Sbjct: 125 LTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184
Query: 179 AAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
AAV G + G + R + Y+ +GL FQVVDDILDVT S LGKTAGKD K
Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGK 244
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TY ++G++ +R A L + A LA F ARA L LA + +R
Sbjct: 245 PTYVSIIGLDASRALAAQLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|420174718|ref|ZP_14681166.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM061]
gi|420190134|ref|ZP_14696078.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM037]
gi|420192268|ref|ZP_14698128.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM023]
gi|420204435|ref|ZP_14709993.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM015]
gi|394244622|gb|EJD89957.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM061]
gi|394259025|gb|EJE03895.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM037]
gi|394261479|gb|EJE06276.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM023]
gi|394273445|gb|EJE17876.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM015]
Length = 293
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRG+ TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVNIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 -------IENARKFACDLLAQATEELAYFEVARAAPLYH 277
+ N + A + L Q +++ E++ L++
Sbjct: 251 KDGAEEKLNNHQCLALNCLNQISDQYDTSELSDIVDLFY 289
>gi|345875754|ref|ZP_08827543.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
gi|417957382|ref|ZP_12600305.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968389|gb|EGV36618.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968452|gb|EGV36680.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
Length = 298
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 166/268 (61%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P+K+HEAMRY L GGKR+RP+L +A+ EL D ++ A+EMIH SLVHDD+P
Sbjct: 33 PSKLHEAMRYVTLGGGKRLRPLLVLAASELGEADATAVEQAMAAIEMIHVYSLVHDDMPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H + E TA+L GDAL + AF+ V ++ + R + ++ L A
Sbjct: 93 MDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFD-VLSRPCGLPAARQLNMLSVLAKAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ + GK ++ ELE +H KT L+ AAV G + G + + +
Sbjct: 152 GSFGMAGGQAIDLANVGKPMTQTELEQMHGLKTGALIRAAVALGALSCPGLDDTALAALD 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
YA +GL FQV+DD+LD + LGKTAGKD +DK TY KLMG+E AR +A L+A+
Sbjct: 212 NYATNLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEQARSYAEQLIAE 271
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
AT L F +A L LA ++ +R++
Sbjct: 272 ATIYLESFG-EKAVHLRLLAEFVTARKN 298
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEISPDRVVRAIAELGSAVG 141
+DD RRG+PT HK F E AILAGD L SLAFE +A A +R A L A G
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAG 150
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRK 200
G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + + +
Sbjct: 151 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQ 210
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L QA
Sbjct: 211 YARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA 270
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L F++A A PL LA YI R++
Sbjct: 271 LHALRPFDIA-AEPLRELARYIVERRN 296
>gi|337746949|ref|YP_004641111.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
gi|336298138|gb|AEI41241.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
Length = 301
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 168/287 (58%), Gaps = 4/287 (1%)
Query: 5 AKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A R+ L ++ Q P + E++ YSL+AGGKR+RP+L +A+ E + G +AMP A
Sbjct: 15 AGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGRAEAAMPAA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAK 120
A+EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AF AA+
Sbjct: 75 LAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAFHTAVQAAR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ D VV + EL G+ G+V G+ D+ E L ELE IHLHKT+ L+ +
Sbjct: 135 RHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLHKTSDLIVFS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+ G I G +++ + ++ CIGL FQ+ DDILD+ ++LGK D+ K TY
Sbjct: 195 LKAGGRIAGATSTQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQSDVKQGKVTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P +GIE + +L A+A + L LA Y+ R H
Sbjct: 255 PYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRDH 301
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 175/284 (61%), Gaps = 6/284 (2%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R+N+ L + + A + +AM+Y LL GGKRVRP L A+ +++G + S+ A A
Sbjct: 15 RINQFLANQFEEIDSYNAHLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAA 74
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E IH SL+HDDLP MDND+ RRG+PT H F E TAILAGDAL + AFE + ++ +
Sbjct: 75 IESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFE-ILTEAPSL 133
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S ++ ++ + L A G +G+ G+ +D+ SE K V+L+ELE IH +KT LL AA+ G
Sbjct: 134 SAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLG 193
Query: 185 VIIGG--GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
I N +++ +Y++ IGL FQV DDILD+ S E+GK G DL DK+TYPK
Sbjct: 194 FICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSAEIGKPVGSDLGLDKSTYPK 253
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+G+E A++ A +L A EL A L LA +I +R+
Sbjct: 254 LLGLEGAKQKAQELYQTALHELDNLPFDTTA-LRALAEFIVNRK 296
>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
Length = 296
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 172/286 (60%), Gaps = 8/286 (2%)
Query: 6 KRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
R+N L+ + H A + +AM+Y+LL GGKRVRP L A+ +++G ++ + VA
Sbjct: 13 NRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAA 72
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+
Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
IS ++ + + L G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+
Sbjct: 132 ISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKL 191
Query: 184 GVIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TY
Sbjct: 192 GFICSPHFTDKKLE-QSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTY 250
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
PKL+G+ A++ A DL A EL A L LA +I +R+
Sbjct: 251 PKLLGLSGAKQKAQDLYQSALSELEKIPFNTTA-LRALAEFIITRK 295
>gi|345430245|ref|YP_004823365.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 176/284 (61%), Gaps = 6/284 (2%)
Query: 7 RVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R+N+ L + + A + +AM+Y LL GGKRVRP L A+ +++G + S+ A A
Sbjct: 15 RINQFLANQFEEIDSYNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAA 74
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E IH SL+HDDLP MDND+ RRG+PT H F E TAILAGDAL + AFE + ++ +
Sbjct: 75 IESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFE-ILTEAPSL 133
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S ++ ++ + L A G +G+ G+ +D+ SE K V+L+ELE IH +KT LL AA+ G
Sbjct: 134 SAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLG 193
Query: 185 VIIGG--GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
I N +++ +Y++ IGL FQV DDILD+ +S E+GK G DL DK+TYPK
Sbjct: 194 FICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEGNSAEIGKPVGSDLDLDKSTYPK 253
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L+G+E A++ A +L A EL A L LA +I +R+
Sbjct: 254 LLGLEGAKQKAQELYHTALHELDNLPFDTTA-LRALAEFIVNRK 296
>gi|337278944|ref|YP_004618415.1| Geranyltranstransferase [Ramlibacter tataouinensis TTB310]
gi|334730020|gb|AEG92396.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)-like
protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 167/281 (59%), Gaps = 1/281 (0%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V +AL V PA + +AMRY++L GGKR+RP+L +A+ E V G+E++A+ ACA+E+
Sbjct: 29 VEQALSRWVVADAPAGLGDAMRYAVLDGGKRLRPLLVLAAAEAVRGNEAAALRAACAVEL 88
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IH SLVHDD+PCMDND RRGKPT H FG+ A+LAGDAL +LAFE +A + +
Sbjct: 89 IHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALLAGDALQALAFELLAPEDEDGVSA 148
Query: 128 RVVRAIAE-LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVI 186
V A+ L A G EG+ G+ +D+ S G+ + +L +H KT LL +V+ G
Sbjct: 149 TVQAALCRLLARAAGHEGMAGGQAIDLASVGQQLDEPQLREMHRRKTGALLRGSVMMGAA 208
Query: 187 IGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
G + +Y +GL FQVVDDILDVT S LGKTAGKD DK TY L+G+
Sbjct: 209 CGDIGTAARAALSRYGAALGLAFQVVDDILDVTADSATLGKTAGKDAAQDKPTYVSLLGL 268
Query: 247 ENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
E +R A LL +A L + L+ LA + R +
Sbjct: 269 ERSRALAAGLLDEALAALGESGLPDTRALHALAKMVVDRDN 309
>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
Length = 303
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 8/272 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCEL-VGGDESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++ A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATAHLNPNNNAAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP--DR--VVRAIAE 135
CMDND RRG+PT H +GEDTA+LAGD L S+AFE + ++ + P D+ V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDAGPVVDQGIVLKQMQI 152
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV-CGVIIGGGNMIE 194
L +A S +V G+++D+ +EGK V LENIH +KT L+ AAV+ V + G
Sbjct: 153 LATA--SSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQA 210
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ ++R+YA+ IGL FQV DDILD+ ++ LGKTAGKD +K+TYP LMG+E+A+ +A
Sbjct: 211 IPKLREYAQAIGLAFQVQDDILDIISNTDVLGKTAGKDEQVEKSTYPALMGLESAQDYAK 270
Query: 255 DLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA LAYF + AA L ++ ++ +RQ
Sbjct: 271 TLHDQAFAALAYFPMDAAAELNQISQFLLARQ 302
>gi|365842258|ref|ZP_09383287.1| putative geranyltranstransferase [Flavonifractor plautii ATCC
29863]
gi|364576099|gb|EHM53446.1| putative geranyltranstransferase [Flavonifractor plautii ATCC
29863]
Length = 293
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 170/265 (64%), Gaps = 1/265 (0%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
+++AMRYSLLAGGKR+RPVL + +C L GG A+P A A+EM+HT SL+HDDLPCM
Sbjct: 29 GNLYDAMRYSLLAGGKRLRPVLLLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLPCM 88
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D+DD RRG+PTNHKVFGE A+LAGD LL+ AFE + A ++ P+RV+ A L A G
Sbjct: 89 DDDDLRRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPERVLAAAGILARAAG 148
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
G+V G+++D+ EG+ + L E+E + KT L+ AAV G + GG + E + +Y
Sbjct: 149 GRGMVGGQVLDMAGEGRALGLTEVEELQRLKTGALIRAAVEMGCAVAGGAEEQREALCRY 208
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A C+GL FQ+ DDILDV LGK G D+ SDK T+ L G+ + R +L +A
Sbjct: 209 ADCLGLAFQIQDDILDVVGDEATLGKPIGSDVRSDKTTFVALKGLADCRILVAELTDRAV 268
Query: 262 EELAYFEVARAAPLYHLAYYIASRQ 286
E LA F + A L LA +A R+
Sbjct: 269 EALAPFG-SEAESLRGLAQSLAGRE 292
>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
Length = 293
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 163/263 (61%), Gaps = 1/263 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ AMR+ L GGKR+RP L A EL+G D++ +A A+E +H SL+HDDLP MD+
Sbjct: 31 LKAAMRHGALIGGKRIRPFLVYAVGELLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDD 90
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
D+ RRGKPT H F E TAILAGDAL +LAFE ++ ++P V IA L A G
Sbjct: 91 DNLRRGKPTVHIAFDEATAILAGDALQTLAFEIISESDAGLAPKAQVAMIAALARASGYL 150
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+ G+ +D+ EGK +SL+EL +H KT L+ AAV +I + + +R YA
Sbjct: 151 GMCGGQALDLAGEGKSISLDELTRLHNLKTGALIRAAVELALIAADASDADTAALRAYAD 210
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IGL FQV DDILD+T +++E+GK G DL ++K+TYPKL+G++ AR+ A L+A A
Sbjct: 211 AIGLAFQVQDDILDITATTEEIGKPQGSDLDANKSTYPKLLGLDGARQTADALVADALSA 270
Query: 264 LAYFEVARAAPLYHLAYYIASRQ 286
LA + L A YI +R+
Sbjct: 271 LAKMPY-NSQLLADFARYIVARR 292
>gi|379720811|ref|YP_005312942.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
gi|378569483|gb|AFC29793.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
Length = 301
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 168/287 (58%), Gaps = 4/287 (1%)
Query: 5 AKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A R+ L ++ Q P + E++ YSL+AGGKR+RP+L +A+ E + G +AMP A
Sbjct: 15 AGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGRAEAAMPAA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAK 120
A+EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AF AA+
Sbjct: 75 LAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAFHTAVQAAR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ D VV + EL G+ G+V G+ D+ E L ELE IHLHKT+ L+ +
Sbjct: 135 RHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLHKTSDLIVFS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+ G I G +++ + ++ CIGL FQ+ DDILD+ ++LGK D+ K TY
Sbjct: 195 LKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQSDVKQGKVTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P +GIE + +L A+A + L LA Y+ R H
Sbjct: 255 PYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRDH 301
>gi|336418711|ref|ZP_08598983.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
gi|336164388|gb|EGN67295.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
Length = 297
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 167/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y++L GGKR+RP L + EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNENIDKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ E + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G++ ++K
Sbjct: 202 DKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMKESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
+ + +A + + F + L LA +I R+
Sbjct: 262 LNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|386723418|ref|YP_006189744.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
gi|384090543|gb|AFH61979.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
Length = 301
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 168/287 (58%), Gaps = 4/287 (1%)
Query: 5 AKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
A R+ L ++ Q P + E++ YSL+AGGKR+RP+L +A+ E + G +AMP A
Sbjct: 15 AGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGRAEAAMPAA 74
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAK 120
A+EMIHT SL+HDDLP MDNDD+RRGK TNHKV+GE AILAGDALL+ AF AA+
Sbjct: 75 LAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAFHTAVQAAR 134
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ D VV + EL G+ G+V G+ D+ E L ELE IHLHKT+ L+ +
Sbjct: 135 RHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLHKTSDLIVFS 194
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
+ G I G +++ + ++ CIGL FQ+ DDILD+ ++LGK D+ K TY
Sbjct: 195 LKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQSDVKQGKVTY 254
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P +GIE + +L A+A + L LA Y+ R H
Sbjct: 255 PYFIGIEASEAKVAELTAEAKNAILGGGFPEPRRLLELADYLMKRDH 301
>gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|416125261|ref|ZP_11595859.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
gi|418327939|ref|ZP_12939071.1| geranyltranstransferase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418630630|ref|ZP_13193111.1| geranyltranstransferase [Staphylococcus epidermidis VCU128]
gi|418633122|ref|ZP_13195539.1| geranyltranstransferase [Staphylococcus epidermidis VCU129]
gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
gi|365232498|gb|EHM73494.1| geranyltranstransferase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374837820|gb|EHS01383.1| geranyltranstransferase [Staphylococcus epidermidis VCU128]
gi|374839941|gb|EHS03448.1| geranyltranstransferase [Staphylococcus epidermidis VCU129]
Length = 288
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 8 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 66
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRG+ TNHKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 67 EMIHTYSLIHDDLPAMDNDDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 125
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 126 DSVKVNIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAV 185
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 186 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 245
Query: 246 -------IENARKFACDLLAQATEELAYFEVARAAPLYH 277
+ N + A + L Q +++ E++ L++
Sbjct: 246 KDGAEEKLNNHQCLALNCLNQISDQYDTSELSDIVDLFY 284
>gi|421626909|ref|ZP_16067733.1| polyprenyl synthetase [Acinetobacter baumannii OIFC098]
gi|408694412|gb|EKL39983.1| polyprenyl synthetase [Acinetobacter baumannii OIFC098]
Length = 303
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/274 (44%), Positives = 176/274 (64%), Gaps = 14/274 (5%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-------STEISPDRVVRA 132
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ TE + V++
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTEAAI--VLKQ 150
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGN 191
I L +A S +V G+++D+ +E K +S +ELENIH +KT L++AA++ G V I
Sbjct: 151 IQILATA--SSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPDT 208
Query: 192 MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+ ++R+Y + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+E A+
Sbjct: 209 DQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQI 268
Query: 252 FACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+A +L QA E LA+F A L ++ ++ +R
Sbjct: 269 YAKELHDQAFEALAHFG-ENAKELVEISQFLLAR 301
>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 152/240 (63%), Gaps = 4/240 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I +AM YSLLAGGKR+RP+L +A E++ + CA+EMIHT SL+HDDLP MDN
Sbjct: 32 IKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDN 91
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGKPTNHKVFGE AILAGD LL++A+E + + E +RA + GS
Sbjct: 92 DDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESKSIDKMRAAGIVAKYAGSL 151
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G+++D+ SEGK + + L+ +H KT L++A V +I G + E E + YA
Sbjct: 152 GMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAA 211
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILD+ + + +GK G D +K+TY + G+E ++K LL T+E
Sbjct: 212 NLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYGLEESKK----LLETVTQE 267
>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
Length = 296
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/285 (43%), Positives = 173/285 (60%), Gaps = 8/285 (2%)
Query: 7 RVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R+N+ L+ ++ H A + +AM+Y+LL GGKRVRP L + +++G + + VA A
Sbjct: 14 RINRFLETQLEGIESHNAPLLDAMKYALLLGGKRVRPFLVYTTGQMLGAGKQTLDYVAAA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+ I
Sbjct: 74 IEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPNI 132
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S ++ + + L + G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+ G
Sbjct: 133 SAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLG 192
Query: 185 VIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TYP
Sbjct: 193 FICSPHFADKTLE-QSLTQYAETIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYP 251
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KL+G+ A++ A DL A EL A L LA +I +R+
Sbjct: 252 KLLGLSGAKQKAQDLYQSALSELEKIPFDTTA-LRALAEFIITRK 295
>gi|386826800|ref|ZP_10113907.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
gi|386427684|gb|EIJ41512.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 184/290 (63%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M+ +R+N+AL + + H P ++HEAM Y++L GGKRVRP+L + + +
Sbjct: 7 MSLYQQRINQALTQHLPAPHILPVRLHEAMHYAVLNGGKRVRPLLVYLTGQALNVAPDVL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
ACA+E IH SLVHDDLP MD+DD RRGKPT HK F E TAILAGDAL + AF +
Sbjct: 67 DIPACAVECIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQAHAFYLLT 126
Query: 119 AKST-EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
T ++SP + + + L A S G+V G+++D+++ GK+++ ELEN+H+HKT L+
Sbjct: 127 HDPTQQLSPAQRLAMVEALSLASSSRGMVGGQMIDMEAVGKNLNAAELENMHIHKTGALI 186
Query: 178 EAAVVCGVIIGGGNMIE--VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
A+V G + N E E++ +YA+CIGL FQ+ DDILDV ++ LGK G D
Sbjct: 187 RASVKLGA-LASPNFSEETFEQLDRYAKCIGLAFQIQDDILDVEAPTETLGKKQGADTAL 245
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+K TYP ++G++ +++ A +L+ QA + L F+ RA PL LA+YI R
Sbjct: 246 NKPTYPSIIGLQASKQMAIELIEQAVQALQTFD-QRADPLRELAHYIIKR 294
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 156/245 (63%), Gaps = 2/245 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
+AMRYS+ AGGKR+RPVL + C ++GGD A+P ACA+E+IH+ SL+HDDLPCMD+D
Sbjct: 39 DAMRYSVTAGGKRIRPVLTLEVCRMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDDDA 98
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHV--AAKSTEISPDRVVRAIAELGSAVGSE 143
RRGKP+ H FGE TA+LAGDALL+LAFE A ++ + +RAI+ L G
Sbjct: 99 MRRGKPSCHIAFGESTALLAGDALLTLAFETASHAPQTHGTGCEETLRAISILSRLAGVH 158
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G++ G+++D++SEG+ + L +HL KT L++AA G G +++++ +YA
Sbjct: 159 GMIGGQVIDLESEGRGIEYPVLHQMHLLKTGALIKAACQMGAAAAGAQEEDLDKIGEYAD 218
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
+GL FQ+ DDILDV +LGK G D K ++ L G+E +R A + A E
Sbjct: 219 ALGLAFQICDDILDVVGDEAQLGKPVGSDKQQQKTSFITLFGLEESRSNAQMMTTLAKES 278
Query: 264 LAYFE 268
LA FE
Sbjct: 279 LASFE 283
>gi|385265427|ref|ZP_10043514.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|394992172|ref|ZP_10384964.1| YqiD [Bacillus sp. 916]
gi|429505839|ref|YP_007187023.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452856198|ref|YP_007497881.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|385149923|gb|EIF13860.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|393807001|gb|EJD68328.1| YqiD [Bacillus sp. 916]
gi|429487429|gb|AFZ91353.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452080458|emb|CCP22221.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 182/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G DE +PV CA+EMIHT SL+
Sbjct: 24 TERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + + +E +S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+ D+++E K ++L ELE+IH KTAKLL +V G I+
Sbjct: 144 DELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPED 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
EVE++R ++ IG+ FQ+ DDILD+ + +GK G D ++K+TYP L+ +E A++
Sbjct: 204 EVEKLRLFSSHIGIGFQIRDDILDIEGHEERIGKPVGSDTSNEKSTYPSLLTLEGAKEKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+++A + ++ + + L+ L IA+R H
Sbjct: 264 AYHISEAKQIISGLSLQKEL-LHDLCDLIAARDH 296
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 170/254 (66%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
QL+ P + EAM YSL AGGKR+RP+L A+ + + + ACALEMIHT SL+HD
Sbjct: 27 QLQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A +IS + +R E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK + L+ELE IH HKT +LLE AV+ G ++ G +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L I+ A+ +
Sbjct: 207 KKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEAKCILEE 266
Query: 256 LLAQATEELAYFEV 269
+ +A + +A ++
Sbjct: 267 TIVKAKDAIASLQL 280
>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
Length = 297
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 166/275 (60%), Gaps = 2/275 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
E +L +P I + M Y+ L GGKR+RP L A+ EL+ + + A ALEMIH+ SL
Sbjct: 22 ELKELSYPEIIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSL 81
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRA 132
VHDDLP +DNDD+RRGK T HKVFGE IL GD+LL+ AF ++ K+ E +S +++V
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 133 IAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNM 192
I++ G G++ G+++DI+SE K + L L+ IH HKT KL++ + II
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF 252
+ + + +YA IGL FQV DDILDV + ++LGK G D+ KATYP ++G++ ++K
Sbjct: 202 DKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMKESKKI 261
Query: 253 ACDLLAQATEELAY-FEVARAAPLYHLAYYIASRQ 286
D + +A E + F L LA +I R
Sbjct: 262 LNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 170/254 (66%), Gaps = 1/254 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
QL+ P + EAM YSL AGGKR+RP+L A+ + + + ACALEMIHT SL+HD
Sbjct: 27 QLQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHD 86
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA-KSTEISPDRVVRAIAE 135
DLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ V A +IS + +R E
Sbjct: 87 DLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALE 146
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV 195
L A G EG+VAG++ D+++EGK + L+ELE IH HKT +LLE AV+ G ++ G +
Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQE 206
Query: 196 ERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACD 255
+++ +A+ IGL FQ+ DDILDV + +E+GK G D ++K+TY L I+ A+ +
Sbjct: 207 KKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEAKCILEE 266
Query: 256 LLAQATEELAYFEV 269
+ +A + +A ++
Sbjct: 267 TIVKAKDAIASLQL 280
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ I+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 28 NYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 87
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ + A +
Sbjct: 88 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALEACYAIAK 146
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K + L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 147 AAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELL 206
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 207 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 264
>gi|77361281|ref|YP_340856.1| geranyltranstransferase [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 171/287 (59%), Gaps = 4/287 (1%)
Query: 2 TSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
T A +N D++ L I A YSL+ GGKR+RP L A+ +++G D+ +
Sbjct: 12 TDVANTLNLYFDQS--LNTDETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVL 69
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A A+E IH+ SLVHDDLP MD+D+ RRG+PT H V+GE AILAGDAL +LAFE +A +
Sbjct: 70 AAAIECIHSYSLVHDDLPAMDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHN 129
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
S V+ IAEL A G +G+VAG+ +DI + K +++ ELE IH KT L+ A+
Sbjct: 130 FNCSAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAI 189
Query: 182 VCGVIIGGG-NMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G + + +E + + IGL FQV DDILDV + LGK G D+ ++KATY
Sbjct: 190 TLGALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATY 249
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P L+G+ A++ A +L+ QA LA + A + L LA Y+ R H
Sbjct: 250 PALLGMLGAKEKAQNLIQQAHAALANID-ADTSALASLANYLIERDH 295
>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|386050339|ref|YP_005968330.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|386053616|ref|YP_005971174.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404283854|ref|YP_006684751.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|405758410|ref|YP_006687686.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|346424185|gb|AEO25710.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|346646267|gb|AEO38892.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404233356|emb|CBY54759.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|404236292|emb|CBY57694.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|441471036|emb|CCQ20791.1| Farnesyl diphosphate synthase [Listeria monocytogenes]
gi|441474163|emb|CCQ23917.1| Farnesyl diphosphate synthase [Listeria monocytogenes N53-1]
Length = 293
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + R+ ++ E+M YS+ AGGKR+RP+L A+ + + + + A A
Sbjct: 13 KVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFS-ILAEDDNL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|387786585|ref|YP_006251681.1| putative farnesyl diphosphate synthase [Streptococcus mutans LJ23]
gi|449958604|ref|ZP_21809821.1| putative farnesyl diphosphate synthase [Streptococcus mutans 4VF1]
gi|450138832|ref|ZP_21872316.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML1]
gi|379132986|dbj|BAL69738.1| putative farnesyl diphosphate synthase [Streptococcus mutans LJ23]
gi|449169889|gb|EMB72641.1| putative farnesyl diphosphate synthase [Streptococcus mutans 4VF1]
gi|449233634|gb|EMC32697.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML1]
Length = 289
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKSINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKTLARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|450045866|ref|ZP_21838648.1| putative farnesyl diphosphate synthase [Streptococcus mutans N34]
gi|449199685|gb|EMC00741.1| putative farnesyl diphosphate synthase [Streptococcus mutans N34]
Length = 289
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKTLARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|395792807|ref|ZP_10472231.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432364|gb|EJF98353.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 300
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 175/294 (59%), Gaps = 8/294 (2%)
Query: 1 MTSKAKRVNKALD-------ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 53
+ + + V K LD E ++ P + +AMRY +L GGKR+RP L I S L
Sbjct: 8 LATHGRSVEKRLDGLLNNKIENGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDI 67
Query: 54 DESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA 113
++ VACALE +H SL+HDDLP MDND RRG+PT HK F E TAILAG+ALL+ A
Sbjct: 68 PPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHKAFDEATAILAGNALLTFA 127
Query: 114 FEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKT 173
FE +A K+ +S + ++ I L + G G++ G+++DI++E + + KT
Sbjct: 128 FEIIAHKAFALSFETRIKLITALAQSAGLGGMIGGQMLDIEAEKTPQESTNIMTLQRMKT 187
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A L+ A G II + E++ + +GL FQ+ DD+LD+T +S++LGKTAGKD
Sbjct: 188 AALISFACQAGAIISNASQELTEKLAAFGTYLGLAFQLTDDLLDMTANSEDLGKTAGKDE 247
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ KAT+ +L GI+ +K +L+A+A E L + +A PL A++ A+R++
Sbjct: 248 TAQKATFVRLYGIKETQKKRDELIAKA-ESLLHSFGEKAKPLQQAAHFSATRKN 300
>gi|344337348|ref|ZP_08768282.1| Geranyltranstransferase [Thiocapsa marina 5811]
gi|343802301|gb|EGV20241.1| Geranyltranstransferase [Thiocapsa marina 5811]
Length = 297
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 176/269 (65%), Gaps = 3/269 (1%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
P ++HEAMRY++L GGKR+RP+L A+ E +G D ACA+E+IH SL+HDDLP
Sbjct: 31 QPVRLHEAMRYTVLGGGKRIRPLLAYAAGEALGVDPVLLDRPACAVELIHAYSLIHDDLP 90
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MD+DD RRG+PT H+ F E TAILAGDAL +LAF+ +A +S + ++ + +A L A
Sbjct: 91 AMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQALA-ESPGLDAEKRIAMVASLARA 149
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII-GGGNMIEVERV 198
G+ G+V G+ +D+ +EG + + LE+IH+HKT L+ AAV G++ + ER+
Sbjct: 150 SGARGMVGGQALDLAAEGSVLDVAMLEHIHIHKTGALIRAAVQMGILAHDAPDPDHAERL 209
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+YA+CIGL FQ+ DD+LDV + +GKTAG+D V +KATYP L+G+ A++ A L+
Sbjct: 210 DRYAKCIGLAFQIQDDVLDVEGDTDLIGKTAGRDQVLEKATYPALVGLPEAKEMAAALIG 269
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
A E + F A PL +A + R+H
Sbjct: 270 DALESIGVFSSG-ADPLRWIAGALIGRKH 297
>gi|194366666|ref|YP_002029276.1| polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 153/247 (61%), Gaps = 2/247 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++H+AMRYS+L GGKR+RP+L AS +L G S A A+E+IH SLVHDDLP
Sbjct: 29 PQRLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPESLDAAAMAVELIHAYSLVHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+D RRGKPT H F E TAILAGDAL + AF +A + V + L A
Sbjct: 89 MDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLA--DAPLPATLRVACLQTLAHAS 146
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+ G+ G+ +DID+ G+ +L L +H KT L+ AAV G + G + ++ ++
Sbjct: 147 GASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGALCGQAHEPQLAQLDS 206
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
+A +GL FQV DDILDV SS++LGKTAGKD DK+T+P L+G++ A+ +L A+
Sbjct: 207 FADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGMDGAKAQLRELAARM 266
Query: 261 TEELAYF 267
LA +
Sbjct: 267 QSTLAGY 273
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 151/238 (63%), Gaps = 1/238 (0%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ I+EAM YSL AGGKR+RPVL + + L D AMP+A A+EMIHT SL+HDDL
Sbjct: 24 NYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDD RRGKPTNHK+FGE AILAGDALL+ A + S + + ++ + A +
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK-NGEKALEACYAIAK 142
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A G +G++ G+++DI SE K + L+EL +H KT L++A+++ G I+G ++E +
Sbjct: 143 AAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELL 202
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+Y +GL FQ+ DDILDV + LGK D + K T+ K+ GIE + ++
Sbjct: 203 GEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEM 260
>gi|424742421|ref|ZP_18170743.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
gi|422944037|gb|EKU39042.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
Length = 303
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 166/254 (65%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC ++ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYSTASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE ++++ + V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLSSRLFDEQGQGTDAAIVLKQIQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A +V G+I+D+ +E K + ELENIH +KT L++AA++ G V I G
Sbjct: 153 ILATATSK--MVCGQILDLQAEAKQIVQEELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV+DDILD+T S++ LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 254 CDLLAQATEELAYF 267
+L QA E LA+F
Sbjct: 271 KELHDQAFEALAHF 284
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/244 (45%), Positives = 160/244 (65%), Gaps = 3/244 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDDLPCM 81
++ E+M+YS+ AGGKR+RP+L +A+ ++A+ A ALEM+HT SL+HDDLP M
Sbjct: 28 RLFESMQYSIQAGGKRIRPLLLVATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAM 87
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD RRGKPTNHKVFGE AILAGD LL+ AF+ VA EI ++ V + +L A G
Sbjct: 88 DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKAAG 145
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
++G+VAG+ DI E + + L EL +IH KT +L+ AV+ G ++ + + ++
Sbjct: 146 TQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 205
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A+ IGL FQ+ DD+LD T +++ELGK +D K+TYP L+G+ A++ + L +A
Sbjct: 206 AQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 265
Query: 262 EELA 265
E LA
Sbjct: 266 EILA 269
>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
Length = 296
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 172/286 (60%), Gaps = 8/286 (2%)
Query: 6 KRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
R+N L+ + H A + +AM+Y+LL GGKRVRP L A+ +++G ++ + VA
Sbjct: 13 NRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAA 72
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+
Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
IS ++ + + L G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+
Sbjct: 132 ISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKL 191
Query: 184 GVIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TY
Sbjct: 192 GFICSPHFTDKRLE-QSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTY 250
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
PKL+G+ A++ A DL A EL A L LA +I +R+
Sbjct: 251 PKLLGLSGAKQKAQDLYQSALSELEKIPFDTTA-LRALAEFIITRK 295
>gi|347548748|ref|YP_004855076.1| putative geranyltranstransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981819|emb|CBW85792.1| Putative geranyltranstransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 293
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 151/229 (65%), Gaps = 1/229 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ E+M YS+ AGGKR+RP+L A+ + + D + A ALEMIHT SL+HDDLP MD
Sbjct: 31 KLKESMLYSVQAGGKRIRPMLVFATLQALNTDPMLGVKTATALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+G+ TAILAGDALL+LAF V A+ ++ + + I+EL + G+
Sbjct: 91 NDDYRRGKWTNHKVYGDATAILAGDALLTLAFS-VLAEDANLTFETRIALISELSFSSGA 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+++E V+L EL +IH KT +LL AV I + +R+R +A
Sbjct: 150 EGMVGGQQADMEAENNQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A++
Sbjct: 210 ENIGVGFQISDDILDVIGDEMKMGKKTGGDAFLNKSTYPGLLTLDGAKR 258
>gi|425901813|ref|ZP_18878404.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397893029|gb|EJL09505.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 295
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 176/288 (61%), Gaps = 5/288 (1%)
Query: 3 SKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
S RVN AL+ P A++++AMRYS++ GGKRVRP+L A+CE +G A
Sbjct: 8 SSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGARPEQANG 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-A 119
ACA+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF +
Sbjct: 68 AACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDP 127
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ ++ S + ++ ++ L A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 128 RLSDSSAEIRLQMVSTLALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G E++ ++ YA+ IGL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+G+E A+ +A +L QA L F+ A A PL LA YI R+
Sbjct: 248 TYPALLGLEAAKAYALELRDQALHALRPFD-AGAEPLRELARYIVERR 294
>gi|290580921|ref|YP_003485313.1| farnesyl diphosphate synthase [Streptococcus mutans NN2025]
gi|449883818|ref|ZP_21785388.1| putative farnesyl diphosphate synthase [Streptococcus mutans SA38]
gi|449926529|ref|ZP_21800802.1| putative farnesyl diphosphate synthase [Streptococcus mutans 4SM1]
gi|449971770|ref|ZP_21814541.1| putative farnesyl diphosphate synthase [Streptococcus mutans 2VS1]
gi|450031040|ref|ZP_21833532.1| putative farnesyl diphosphate synthase [Streptococcus mutans G123]
gi|450059375|ref|ZP_21843438.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML4]
gi|450068433|ref|ZP_21847168.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML9]
gi|450094911|ref|ZP_21857159.1| putative farnesyl diphosphate synthase [Streptococcus mutans W6]
gi|450147950|ref|ZP_21875357.1| putative farnesyl diphosphate synthase [Streptococcus mutans 14D]
gi|450166611|ref|ZP_21882387.1| putative farnesyl diphosphate synthase [Streptococcus mutans B]
gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NN2025]
gi|449160550|gb|EMB63806.1| putative farnesyl diphosphate synthase [Streptococcus mutans 4SM1]
gi|449171586|gb|EMB74240.1| putative farnesyl diphosphate synthase [Streptococcus mutans 2VS1]
gi|449192007|gb|EMB93451.1| putative farnesyl diphosphate synthase [Streptococcus mutans G123]
gi|449203031|gb|EMC03910.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML4]
gi|449206878|gb|EMC07567.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML9]
gi|449216053|gb|EMC16207.1| putative farnesyl diphosphate synthase [Streptococcus mutans W6]
gi|449236405|gb|EMC35324.1| putative farnesyl diphosphate synthase [Streptococcus mutans 14D]
gi|449239514|gb|EMC38232.1| putative farnesyl diphosphate synthase [Streptococcus mutans B]
gi|449249467|gb|EMC47589.1| putative farnesyl diphosphate synthase [Streptococcus mutans SA38]
Length = 289
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|154686692|ref|YP_001421853.1| hypothetical protein RBAM_022610 [Bacillus amyloliquefaciens FZB42]
gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
Length = 296
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 183/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G DE +PV CA+EMIHT SL+
Sbjct: 24 TERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + + +E +S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+ D+++E K ++L ELE+IH KTAKLL +V G I+
Sbjct: 144 DELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPED 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
EVE++R ++ IG+ FQ+ DDILD+ +++GK G D ++K+TYP L+ +E A++
Sbjct: 204 EVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDSSNEKSTYPSLLTLEGAKEKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+++A + ++ + + L+ L IA+R H
Sbjct: 264 AYHISEAKQIISGLSLQKEL-LHDLCDLIAARDH 296
>gi|395779097|ref|ZP_10459601.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|423714603|ref|ZP_17688827.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
gi|395416425|gb|EJF82801.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|395431381|gb|EJF97400.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
Length = 300
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 167/274 (60%), Gaps = 1/274 (0%)
Query: 14 ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
+T ++ P + +AMRY +L GGKR+RP L I S L ++ VACALE +H SL
Sbjct: 28 QTGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEHSLDVACALECVHCYSL 87
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAI 133
+HDDLP MDND RRGKPT H F E TAILAG+ALL+ AFE +A K+ +S + ++ I
Sbjct: 88 IHDDLPAMDNDILRRGKPTVHIEFDEATAILAGNALLTFAFEIIAHKANALSTEIRIKLI 147
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
L A G G++ G+++DI++E + ++ + KTA L+ A G IIG +
Sbjct: 148 TALAQASGLGGMIGGQMLDIEAEKRSQESTDIITLQRMKTASLISFACQAGAIIGNASEE 207
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++ + +GL FQ+ DD+LDVT +++ LGKTAGKD + KAT+ +L GIE +K
Sbjct: 208 LLTKLTAFGTYLGLAFQLTDDLLDVTANTQTLGKTAGKDETAQKATFVRLYGIEETQKKR 267
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
L+ +A L F + +A PL A + A+R++
Sbjct: 268 DSLITKAEALLHPFGI-KALPLQQAARFSATRKN 300
>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
Length = 296
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 171/286 (59%), Gaps = 8/286 (2%)
Query: 6 KRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
R+N L+ + H A + AM+Y+LL GGKRVRP L A+ +++G ++ + VA
Sbjct: 13 NRINHFLEAQFEGIESHNAPLLNAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAA 72
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+
Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
IS ++ + + L G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+
Sbjct: 132 ISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKL 191
Query: 184 GVIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TY
Sbjct: 192 GFICSPHFTDKKLE-QSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTY 250
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
PKL+G+ A++ A DL A EL A L LA +I +R+
Sbjct: 251 PKLLGLSGAKQKAQDLYQSALSELEKIPFNTTA-LRALAEFIITRK 295
>gi|421074462|ref|ZP_15535494.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
gi|392527503|gb|EIW50597.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
Length = 292
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 171/266 (64%), Gaps = 3/266 (1%)
Query: 4 KAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
K K V+ AL V +P KI EAMRYSL AGGKR+RP+L +A+ + +GG S + V
Sbjct: 9 KGKIVDHALAAFVPSENVYPPKIFEAMRYSLFAGGKRLRPILLMAAADSIGGKGSDYLNV 68
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
AC LEMIHT SL+HDDLP MD+DD+RRGK T+HKVFGE AILAGD LL+ AF + A+
Sbjct: 69 ACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAFTVMLAQP 128
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
+ D +++ + E+ +A G+ G++ G+++D+ SEG+ + ++ L +H KT L +AAV
Sbjct: 129 G-VQADVLIKVVGEISNAAGALGMIGGQVIDLSSEGEKIDIDTLSYMHQAKTGALFKAAV 187
Query: 182 VCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G + GG +V + +YA+ GL FQ+ DDILDVT + +++GK G D+ + KATY
Sbjct: 188 RAGAQLAGGEEWQVASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDVKNHKATYV 247
Query: 242 KLMGIENARKFACDLLAQATEELAYF 267
L + A+ A + A + L F
Sbjct: 248 TLYSLGEAQDMADQAVTNALQALKQF 273
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 168/253 (66%), Gaps = 2/253 (0%)
Query: 1 MTSKAKRVNKALDETVQ-LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M + K V AL + + P + E+M YSL AGGKR+RP+L +A+ + G E M
Sbjct: 11 MKDRKKLVEDALFSYMNAVEAPEVLLESMNYSLKAGGKRLRPLLVLATLKSFGKPEELGM 70
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA- 118
PVACA+EMIHT SLVHDDLP MD+DDFRRGKPTNHKVFGE AILAGDALL+ +FE +
Sbjct: 71 PVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDALLTHSFEVMED 130
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ ++ P +VV + EL A G G+V G++ D++ EG +SL +LE IH +KT KLL
Sbjct: 131 LLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEYIHRNKTGKLLG 190
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
++V G I+G ++ ++ ++A +GL FQ+ DDILD+ + ++GK G D +++K
Sbjct: 191 FSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAKIGKPVGSDTLNEKV 250
Query: 239 TYPKLMGIENARK 251
TYP L+ + A++
Sbjct: 251 TYPSLLSMNGAKE 263
>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
Length = 294
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 164/268 (61%), Gaps = 7/268 (2%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P K+HEAMRY+++ GGKRVRP+LC A+ EL G E++ + ALEMIH SLVHDD+PC
Sbjct: 29 PGKLHEAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAF--EHVAAKSTEISPDRVVRAIAELGS 138
MD+D RRGKPT H + E TA+L GDAL S AF AA T + +VR EL
Sbjct: 89 MDDDALRRGKPTVHIQYDEPTALLVGDALQSQAFVALTDAAALTAVQQAALVR---ELAL 145
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVER- 197
A GS G+ G+ +D+ S G ++ +LE +H KT LL AAV G + G + R
Sbjct: 146 ASGSVGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLRAAVRMGALAGETPSDDTMRA 205
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ YA IGL FQVVDDILDVT S LGKTAGKD ++K TY ++G++ +R+ A L
Sbjct: 206 LDVYADAIGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGLDASRELAAQLR 265
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASR 285
A A L F ARA L LA + +R
Sbjct: 266 ADAHAALQPFG-ARAQRLAELADLVVNR 292
>gi|417788058|ref|ZP_12435741.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
gi|334308235|gb|EGL99221.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
Length = 277
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDLPCMD 82
+ EAMRYS+ AGGKR+RP+L + S +G S S VA +LE++HT SL+HDDLP MD
Sbjct: 14 LKEAMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMD 73
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND+ RRGKPTNHK FG+ A+LAGD LL+ +FE ++ T+I D+ ++ I++L A G
Sbjct: 74 NDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALAAGP 131
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V+G+ DI E K +L EL+++H KT LL A V G I+ + ++E +RKY
Sbjct: 132 QGMVSGQTDDILGENKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYG 191
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DD+LDV +K LGK KD + +K TYP L+G++ ++ ++L TE
Sbjct: 192 ENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL-NNTE 250
Query: 263 EL 264
L
Sbjct: 251 NL 252
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 165/264 (62%), Gaps = 4/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
+AM+Y LL GGKR+RP L A+ +++G D ++ A A+E IH SL+HDDLP MDND+
Sbjct: 35 DAMKYGLLLGGKRIRPFLVYATGDMLGADLNALDYAAAAIESIHAYSLIHDDLPAMDNDE 94
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRGKPT H F TAILAGDAL + AFE + KST + ++ ++ + EL A G G+
Sbjct: 95 LRRGKPTCHIAFDHATAILAGDALQTFAFE-IITKSTALCAEQKLKLVQELSRAAGVRGM 153
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG--GNMIEVERVRKYAR 203
G+ +D+ +E K V+L ELE IH +KT LL AA++ G I N R+++YA
Sbjct: 154 CLGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGFICSPHYANHALACRLKQYAD 213
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IGL FQV DDILD+ ++ E+GKT G DL DK+TYPK++G++ A+ A +L A +
Sbjct: 214 AIGLAFQVRDDILDIEGNTVEIGKTVGADLNLDKSTYPKMLGLDGAKSKAQELYQSAVKN 273
Query: 264 LAYFEVARAAPLYHLAYYIASRQH 287
L A L LA +I R++
Sbjct: 274 LNEISFDTTA-LRALAEFIIHRKN 296
>gi|449982339|ref|ZP_21818232.1| putative farnesyl diphosphate synthase [Streptococcus mutans 5SM3]
gi|449174958|gb|EMB77412.1| putative farnesyl diphosphate synthase [Streptococcus mutans 5SM3]
Length = 289
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKTLARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|392955274|ref|ZP_10320817.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
gi|391878746|gb|EIT87323.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
Length = 292
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 177/267 (66%), Gaps = 2/267 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P + E+M YSL AGGKR+RP+L +A E G + ACALE++HT SL+HDDLPC
Sbjct: 28 PQSLQESMLYSLQAGGKRLRPILVLAVLEACGKPLEIGLEAACALEVVHTYSLIHDDLPC 87
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+DDFRRGKPTNHKVFGE TA+LAGD LL+++FE +AA S + D+ V +A L A
Sbjct: 88 MDDDDFRRGKPTNHKVFGEATAVLAGDGLLTVSFELIAA-SPHYTADQKVALLALLAKAA 146
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+EG+V G++ D++SE + ++L EL+ +H KT KLLEAAV G I+GG + + +++
Sbjct: 147 GAEGMVGGQMADMESEDQQLTLTELQRVHERKTGKLLEAAVSFGAILGGVSNEAFDHLQR 206
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
Y+ +G+ FQ+ DDILDV S+ +GK G D ++K+TYPKL+ ++ A+ LAQA
Sbjct: 207 YSYHLGIAFQIQDDILDVQGDSQVMGKQVGSDEHNNKSTYPKLLTLQGAKDQLMGHLAQA 266
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L + + L +A Y+ R H
Sbjct: 267 KTHLTQAGI-QTELLASIADYVVQRNH 292
>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
Length = 293
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 150/229 (65%), Gaps = 1/229 (0%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
K+ E+M YS+ AGGKR+RP+L A+ + + D + A ALEMIHT SL+HDDLP MD
Sbjct: 31 KLKESMLYSVQAGGKRIRPMLVFATLQALNTDPMRGVKTATALEMIHTYSLIHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
NDD+RRGK TNHKV+G+ TAILAGDALL+LAF V A+ ++ + + I EL + G+
Sbjct: 91 NDDYRRGKRTNHKVYGDATAILAGDALLTLAFS-VLAEDANLTFETRLALINELSFSSGA 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
EG+V G+ D+++E K ++L EL IH KT +LL AV I + +R+R +A
Sbjct: 150 EGMVGGQQADMEAENKKITLEELATIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A++
Sbjct: 210 ENIGVGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKR 258
>gi|385840231|ref|YP_005863555.1| geranyltranstransferase [Lactobacillus salivarius CECT 5713]
gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDLPCMD 82
+ E+MRYS+ AGGKR+RP+L + S +G S S VA +LE++HT SL+HDDLP MD
Sbjct: 42 LKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMD 101
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND+ RRGKPTNHK FG+ A+LAGD LL+ +FE ++ T+I D+ ++ I++L A G
Sbjct: 102 NDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALAAGP 159
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V+G+ DI E K +L EL+++H KT LL A V G I+ + ++E +RKY
Sbjct: 160 QGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYG 219
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DD+LDV +K LGK KD + +K TYP L+GI+ ++ ++L TE
Sbjct: 220 ENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGIQGTKEALVEVL-NNTE 278
Query: 263 EL 264
L
Sbjct: 279 NL 280
>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
Length = 305
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 170/281 (60%), Gaps = 3/281 (1%)
Query: 7 RVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALE 66
RV AL V + P + +AMRY++L GGKR+RP+L +A+ E VGG+ ++A+ ACA E
Sbjct: 24 RVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATE 83
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
+IH SLVHDDLP MDND RRGKPT H FGE A+LAGDAL +LAFE + + EI P
Sbjct: 84 LIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEI-P 142
Query: 127 DRVVRAIAE-LGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG- 184
+ A+ L A GS+G+ G+ +D+ S G + +L +H KT LL+ +V G
Sbjct: 143 ASIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLREMHRLKTGALLQGSVEMGA 202
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
G + +R Y IGL FQVVDDILDVT S+ LGKTAGKD +DK TY L
Sbjct: 203 ACAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLW 262
Query: 245 GIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
G++ AR A LLA++ L +A A L LA+ + R
Sbjct: 263 GLDGARAQARQLLAESLAALDRSGLADTAALRALAHMVVDR 303
>gi|392394416|ref|YP_006431018.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525494|gb|AFM01225.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 289
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 173/264 (65%), Gaps = 5/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E+M+YSL AGGKR+RPVL +A+ VGG+ +P C LE+IHT SL+HDDLP MD+DD
Sbjct: 29 ESMKYSLSAGGKRIRPVLALAAAHAVGGEGEDILPAVCGLELIHTYSLIHDDLPAMDDDD 88
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
+RRG +NHKVFGE AILAGDALL+ AFE +A + P R +RAI E+ A G G+
Sbjct: 89 YRRGSLSNHKVFGEGQAILAGDALLTYAFELLAQPMGGVEPQRQLRAIREVAQAAGPAGM 148
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+++D+++E K ++L+ELE +H KT +L + G I+ GG +++ + +YA+ I
Sbjct: 149 VGGQVLDLEAEEKQLNLSELEQVHRLKTGAMLVVSARLGAILAGGTEEKIDALTRYAQAI 208
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQ+ DDILD+ S+ LGK DL K+TYP LMG+E A+ +L + E A
Sbjct: 209 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLEGAK---LELKVKTDEAHA 265
Query: 266 YFEV--ARAAPLYHLAYYIASRQH 287
EV RA L+ A YIA R+H
Sbjct: 266 ALEVLGERAGFLHEFADYIAQRKH 289
>gi|359430871|ref|ZP_09221855.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
gi|358233764|dbj|GAB03394.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
Length = 303
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 173/273 (63%), Gaps = 10/273 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE-SSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKR+RP LC A+ L ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRIRPALCYAAAALKPNPHFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-----ISPDRVVRAIA 134
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + P V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDEQGQGTDPAIVLKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGGGNMI 193
L +A S +V G+++D+ +EGK V ELENIH +KT L++AA++ G V + G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEGKQVDQAELENIHRNKTGALIQAAIMMGAVTVFAGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R++ + IGL FQV DDILD+T S++ LGKTAGKD K+TYP LMG+ A+ +A
Sbjct: 211 AIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLAQAQAYA 270
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L QA E LA+F A L ++ ++ +RQ
Sbjct: 271 QTLHDQAFEALAFFG-EDAKDLTAISQFLLARQ 302
>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
Length = 272
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 165/237 (69%), Gaps = 1/237 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G E +PV CA+EMIHT SL+
Sbjct: 24 TEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE TA+LAGD LL+ +F+ + + S E+S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G++ D+++ + V+L ELE+IH KT+KLL V+ G I+
Sbjct: 144 NELISAAGTEGMVGGQVADMEAGNRQVTLEELESIHERKTSKLLGFCVIAGAILADAPEE 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENAR 250
++E +R ++ IG+ FQ+ DDILD+ S +++GK G D +DK+TYP L+ +E A+
Sbjct: 204 DIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAK 260
>gi|449964492|ref|ZP_21811335.1| putative farnesyl diphosphate synthase [Streptococcus mutans 15VF2]
gi|450063039|ref|ZP_21844709.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML5]
gi|450122032|ref|ZP_21866559.1| putative farnesyl diphosphate synthase [Streptococcus mutans ST6]
gi|449172437|gb|EMB75063.1| putative farnesyl diphosphate synthase [Streptococcus mutans 15VF2]
gi|449205098|gb|EMC05861.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML5]
gi|449228428|gb|EMC27797.1| putative farnesyl diphosphate synthase [Streptococcus mutans ST6]
Length = 289
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|450089808|ref|ZP_21855288.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NV1996]
gi|450132881|ref|ZP_21870352.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML8]
gi|449152379|gb|EMB56088.1| putative farnesyl diphosphate synthase [Streptococcus mutans NLML8]
gi|449214931|gb|EMC15160.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NV1996]
Length = 289
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKSINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|375108094|ref|ZP_09754355.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374668825|gb|EHR73610.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 296
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 165/278 (59%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V AL+ V PA + AMRY +L GGKR+RP+L +A+CE V GD ++A+ A A+E+
Sbjct: 17 VEGALERWVPEDTPAGLGVAMRYGVLDGGKRLRPLLVMAACEAVHGDPAAALRAAVAVEL 76
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IH SLVHDD+PCMDND RRGKPT H FGE A+LAGDA+ +LAFE + + P
Sbjct: 77 IHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQAMLAGDAMQALAFEVLTPDDGAMPPA 136
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
R A L A G G+ G+ +D+ S GK + L ++H KT LL+A+V+ G
Sbjct: 137 MQARLCALLARAAGHSGMAGGQAIDLASIGKALDEGALRDMHRRKTGALLQASVLMGAAC 196
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
G + + + Y +GL FQVVDDILDVT+ S LGKTAGKD ++K TY ++G+E
Sbjct: 197 GPVDAPAWKALSDYGAALGLAFQVVDDILDVTQESVTLGKTAGKDQDANKPTYVSVLGLE 256
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
AR A L QA LA + A L LA + R
Sbjct: 257 RARAQAHALREQAQAALAASGLPGCAHLAVLADRVVDR 294
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 162/262 (61%), Gaps = 2/262 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
EAMRYSLL GGKRVRPVL A+ GG ++A ACA+E IHT SL+HDDLP MD+D
Sbjct: 36 EAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDA 95
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG+PT H + E TAILAGDAL AFE +A S + ++AIA L A G+ G+
Sbjct: 96 LRRGQPTCHIAYSEATAILAGDALQCQAFEWLA-NSQHMPASAALQAIAALAKASGASGM 154
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCI 205
V G+ +D+ + K V L LE +H HKT L+ A+V G I G + ++R+YA I
Sbjct: 155 VLGQAIDLAAVDKSVDLQHLETMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAI 214
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELA 265
GL FQV DDILDVT ++ LGK AG D +K TY L+G++ A+ A +LL QA +
Sbjct: 215 GLAFQVQDDILDVTANTATLGKEAGADAERNKPTYVSLLGLDGAKHKASELLQQALASIK 274
Query: 266 YFEVARAAPLYHLAYYIASRQH 287
F+ RA L LA YI R H
Sbjct: 275 DFD-ERADILRQLATYIVQRDH 295
>gi|421731050|ref|ZP_16170176.1| hypothetical protein WYY_08174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407075204|gb|EKE48191.1| hypothetical protein WYY_08174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 296
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 182/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G DE +PV CA+EMIHT SL+
Sbjct: 24 TERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + + +E +S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+ D+++E K ++L ELE+IH KTAKLL +V G I+
Sbjct: 144 DELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPED 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
EVE++R ++ IG+ FQ+ DDILD+ +++GK G D ++K+TYP L+ +E A++
Sbjct: 204 EVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTSNEKSTYPSLLTLEGAKEKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+++A ++ + + L+ L IA+R H
Sbjct: 264 AYHISEAKRIISGLSLQKEL-LHDLCDLIAARDH 296
>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Herbaspirillum seropedicae SmR1]
Length = 311
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 164/275 (59%), Gaps = 11/275 (4%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++HEAMRY+ + GGKRVRP+L A+ EL + A A+EMIH SLVHDD+PC
Sbjct: 38 PARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERAAAAVEMIHVYSLVHDDMPC 97
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-STEIS------PDRVVRAI 133
MD+D RRGKPT H + E TA+L GDAL + AF+ +AA +E P R +R +
Sbjct: 98 MDDDALRRGKPTVHIRYDEATALLVGDALQAQAFDTLAAPLESEAGSADAGLPARQLRMV 157
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
L A GS G+ G+ +D+ S G +SL ELE +H KT LL AAV+ G +GG +
Sbjct: 158 KLLAEAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLRAAVLLGA-LGGKALT 216
Query: 194 EVER--VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
E + YAR IGL FQVVDDILD T S LGKTAGKD +K TY ++G+ ++
Sbjct: 217 AAESAALDDYARAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLAESQA 276
Query: 252 FACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
A L A A E LA F +A L LA I R+
Sbjct: 277 LAGRLQADAHEALAPFG-GKARRLRELADLIVQRK 310
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTSADGAACAVELIHAYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEISPDRVVRAIAELGSAVG 141
+DD RRG+PT HK F E AILAGD L SLAFE +A A +R A L A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAG 149
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRK 200
G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + + +
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLSQ 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L QA
Sbjct: 210 YARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L F+++ A PL LA YI R++
Sbjct: 270 LHALRPFDIS-AEPLRELARYIVERRN 295
>gi|384266044|ref|YP_005421751.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899064|ref|YP_006329360.1| geranyltranstransferase [Bacillus amyloliquefaciens Y2]
gi|380499397|emb|CCG50435.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173174|gb|AFJ62635.1| geranyltranstransferase [Bacillus amyloliquefaciens Y2]
Length = 296
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 181/274 (66%), Gaps = 2/274 (0%)
Query: 15 TVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLV 74
T +L P + ++M YSL AGGKR+RP++ +A G DE +PV CA+EMIHT SL+
Sbjct: 24 TERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLI 83
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE-ISPDRVVRAI 133
HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + + +E +S ++ +R +
Sbjct: 84 HDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSYVSEAVSAEKRLRLV 143
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
EL SA G+EG+V G+ D+++E K ++L ELE+IH KTAKLL +V G I+
Sbjct: 144 DELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPED 203
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
EVE++R ++ IG+ FQ+ DDILD+ + +GK G D ++K+TYP L+ +E A++
Sbjct: 204 EVEKLRLFSSHIGIGFQIRDDILDIEGHEERIGKPVGSDTSNEKSTYPSLLTLEGAKEKL 263
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+++A + + + + L+ L IA+R H
Sbjct: 264 AYHISEAKQIITGLSLQKEL-LHDLCDLIAARDH 296
>gi|340785925|ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331]
gi|340551192|gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331]
Length = 299
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 162/273 (59%), Gaps = 10/273 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA++H+AMRY++L GGKRVRP+L A+ EL + A A A+EMIH SLVHDD+PC
Sbjct: 29 PARLHQAMRYAVLDGGKRVRPLLVFAAGELFATPLTVAQRAAAAVEMIHAYSLVHDDMPC 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD----RVVRAIAEL 136
MD+D RRGKPT H + E TA+L GDAL S AF +A EI + R + + L
Sbjct: 89 MDDDALRRGKPTVHVQYDEATALLVGDALQSQAFVVLAEAGAEIGAEIDSARQIVMLRLL 148
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI--- 193
A GS G+ G+ +D+ S G ++SL ELE +H KT LL A+V+ G GG +
Sbjct: 149 AQASGSLGMCGGQAIDLASVGLNLSLAELEQMHKLKTGALLRASVLLGAW--GGKALAPA 206
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
E+E + Y IGL FQVVDDILD T S LGKTAGKD +K TY ++G+ ++ A
Sbjct: 207 EIEALEAYGTAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLPESQALA 266
Query: 254 CDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
L A + LA F +A L LA I R+
Sbjct: 267 EKLRNDAHQALAIFG-NKARRLRELADLIVQRK 298
>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
gi|167663987|gb|EDS08117.1| polyprenyl synthetase [Clostridium scindens ATCC 35704]
Length = 314
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 162/265 (61%), Gaps = 6/265 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M K +++ L E + Q + I EAM YSLLAGGKR+RP+L + L GG+
Sbjct: 25 MKHKVEKIEGILTEYLPRQEGFQSIIMEAMNYSLLAGGKRLRPMLMNETYRLFGGESPLI 84
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
P A+EMIHT SLVHDDLP MDND++RRG+ T H V+GED ILAGDALL+ AFE A
Sbjct: 85 RPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFE-TA 143
Query: 119 AKSTEISPDR---VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
K+ + P+ + RA+ LG G G++ G+++D+ G + L+ I+ KT+
Sbjct: 144 FKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDTIYELKTSA 203
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L+EA+++ G I+GG + EV+ + K AR +G+ FQ+ DDILDVT + + LGK D +
Sbjct: 204 LIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTSTKEVLGKPTHSDEKN 263
Query: 236 DKATYPKLMGIENARKFACDLLAQA 260
+K TY LMG A + +L QA
Sbjct: 264 EKTTYVTLMGTAEAGRMVEELSDQA 288
>gi|450160135|ref|ZP_21879832.1| putative farnesyl diphosphate synthase [Streptococcus mutans 66-2A]
gi|449240428|gb|EMC39104.1| putative farnesyl diphosphate synthase [Streptococcus mutans 66-2A]
Length = 289
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKSINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFIDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|450145339|ref|ZP_21874520.1| putative farnesyl diphosphate synthase [Streptococcus mutans 1ID3]
gi|449149504|gb|EMB53304.1| putative farnesyl diphosphate synthase [Streptococcus mutans 1ID3]
Length = 289
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|294054659|ref|YP_003548317.1| polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 294
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 165/264 (62%), Gaps = 8/264 (3%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
++ +RV +D + + HP ++H AMRYS+ AGGKR+RPVL +A EL +S
Sbjct: 9 LSQYQQRVETGIDTLLPSEDTHPVRLHRAMRYSMEAGGKRLRPVLVLALSELA---DSGQ 65
Query: 59 MPVACA--LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEH 116
P+A A +E +HT +L+HDDLP +DN D RRG+P+ HK F E TA+LAGDALL+ AFE
Sbjct: 66 DPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLAGDALLTFAFE- 124
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ ++ SP+ V I +L A GS L+ G+ DID+EGK V + L+ IH +KTA L
Sbjct: 125 LLSREYASSPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTLQYIHENKTAAL 184
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
L AA+ G+ ++ ++K +G+ FQ+VDDILD T S++ +GK G D +D
Sbjct: 185 LTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATSSAEAMGKPVGNDASAD 244
Query: 237 KATYPKLMGIENARKFACDLLAQA 260
K TY L GIE AR+ A + ++A
Sbjct: 245 KTTYVALHGIEGAREHAKEHTSKA 268
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 158/270 (58%), Gaps = 9/270 (3%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ +AMRY LL GGKRVRP L A E++G A A+E IH SL+HDDLP MD
Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV----VRAIAELGS 138
NDD RRG+PT HK F E TAILAGDAL +LAF +A PD + VR ++ L
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPM---PDSLLANRVRMLSRLAR 147
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVER 197
A G G+ G+ +D+ +EG+ +S+ ELE +H HKT L+E AV G + + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIECAVALGALCKADVDETTLSA 207
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
++ YA IGL FQV DDILD+T + LGK G DL +K+TYP L+G++NAR+ A +L
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKRQGSDLAQEKSTYPALLGLDNARELARELH 267
Query: 258 AQATEELAYFEVARAAPLYHLAYYIASRQH 287
+A L L A YI R H
Sbjct: 268 GKALTALQSLPY-NTDILEAFADYIIERTH 296
>gi|397614405|gb|EJK62777.1| hypothetical protein THAOC_16595 [Thalassiosira oceanica]
Length = 207
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 145/206 (70%), Gaps = 2/206 (0%)
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDD RRGKPTNH ++GED AILAGD+LLS +FEHVA ++ + +++V IA LG +V
Sbjct: 1 MDNDDLRRGKPTNHVIYGEDVAILAGDSLLSTSFEHVARETKGVPAEKIVDVIARLGRSV 60
Query: 141 GSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+EGL G++MD++ E + +L++L+ IH+HKT LL+ AV G I+GG EVE
Sbjct: 61 GAEGLAGGQVMDLECEARPGTTLDDLKWIHIHKTGTLLQIAVAAGAILGGATPAEVEACE 120
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
K++ IGL FQV DDILD T SS++LGKTAGKD DK TY KL+G+E ++++A DL+ +
Sbjct: 121 KFSFNIGLAFQVADDILDCTASSEDLGKTAGKDEAVDKTTYVKLLGLEQSKQYARDLVDE 180
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A LA F RA PL +A YI R
Sbjct: 181 AKACLAPFG-ERALPLLAIADYIIER 205
>gi|375362964|ref|YP_005131003.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346362|ref|YP_007444993.1| geranyltranstransferase [Bacillus amyloliquefaciens IT-45]
gi|371568958|emb|CCF05808.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449850120|gb|AGF27112.1| geranyltranstransferase [Bacillus amyloliquefaciens IT-45]
Length = 296
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 189/289 (65%), Gaps = 3/289 (1%)
Query: 1 MTSKAKRVNKALD-ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
+ S+ K + + L T +L P + ++M YSL AGGKR+RP++ +A G DE +
Sbjct: 9 LASRKKLIEQQLSLYTERLAMPEILKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGI 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
PV CA+EMIHT SL+HDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ +F+ + +
Sbjct: 69 PVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITS 128
Query: 120 KSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+E +S ++ +R + EL SA G+EG+V G+ D+++E K ++L ELE+IH KTAKLL
Sbjct: 129 HVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLG 188
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G I+ EVE++R ++ IG+ FQ+ DDILD+ +++GK G D ++K+
Sbjct: 189 FSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTSNEKS 248
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYP L+ +E A++ +++A ++ + + L+ L IA+R H
Sbjct: 249 TYPSLLTLEGAKEKLAYHISEAKRIISGLSLQKEL-LHDLCDLIAARDH 296
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 160/262 (61%), Gaps = 11/262 (4%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
Q + + I EAM YSLLAGGKR+RP+L + +L G + P A+EMIHT SLVHD
Sbjct: 29 QKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFNGRSKALKPFMAAIEMIHTYSLVHD 88
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDR---VVRAI 133
DLP MDND++RRG+ T H V+GED ILAGDALL+ AFE A K+ P+ + RA+
Sbjct: 89 DLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNYAFE-TAFKAFVTEPEDSLLIGRAL 147
Query: 134 AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMI 193
LG G G++ G+++D+ G+D+S L+ I+ KTA L+E+A++ G I+GG +
Sbjct: 148 GVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDTIYELKTAALIESAMMIGAILGGASEE 207
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKF- 252
EV+ V + A +G+ FQ+ DDILDV SS+ LGK D + K TY L+GIE A +
Sbjct: 208 EVKAVEQIAGNVGIAFQIQDDILDVVSSSEVLGKPVHSDEKNKKTTYVTLLGIEEAARTV 267
Query: 253 ------ACDLLAQATEELAYFE 268
A LL Q AY E
Sbjct: 268 EELSQKAVSLLHQLPGRNAYLE 289
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 1/250 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + +V L V+ PA + AMRY++L GGKR+RP+L +A+CE VGG +A+
Sbjct: 12 MRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALR 71
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDD+PCMDND RRGKPT H FG+ A+LAGDAL +LAFE + +
Sbjct: 72 AACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPE 131
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ P R L A G++G+ G+ +D+ S G+ ++ ++L ++H KT LL A+
Sbjct: 132 DG-VPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRAS 190
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G G + + + +Y IGL FQVVDD+LDVT+ S LGKTAGKD SDK TY
Sbjct: 191 VVMGAACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTY 250
Query: 241 PKLMGIENAR 250
LMG++ AR
Sbjct: 251 VSLMGLDAAR 260
>gi|451942599|ref|YP_007463236.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901986|gb|AGF76448.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 300
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 174/294 (59%), Gaps = 8/294 (2%)
Query: 1 MTSKAKRVNKALD-------ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 53
+ + V K LD E+ ++ P + +AMRY +L GGKR+RP L I S L
Sbjct: 8 LAQHGRSVEKRLDALLSNKIESGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDI 67
Query: 54 DESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLA 113
++ VACALE +H SL+HDDLP MDND RRGKPT HK F E TAILAG+ALL+ A
Sbjct: 68 PPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFDEATAILAGNALLTFA 127
Query: 114 FEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKT 173
FE +A K+ + + ++ + L + G G++ G+++DI++E + + KT
Sbjct: 128 FEIIAHKACALPFETRIKLMTALAQSAGLGGMIGGQMLDIEAEKTPQESINIMTLQRMKT 187
Query: 174 AKLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
A L+ A G IIG +E++ + +GL FQ+ DD+LDVT +S+ LGKTAGKD
Sbjct: 188 AALISFACQAGAIIGNAPQELMEKLAAFGTYLGLAFQLTDDLLDVTANSEVLGKTAGKDE 247
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ KAT+ +L GI+ +K +L+A+A L F +A PL+ A++ A+R++
Sbjct: 248 TAQKATFVRLYGIQETQKKRDELIAKAESLLRPFG-EKAKPLHQAAHFSATRKN 300
>gi|452852192|ref|YP_007493876.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
gi|451895846|emb|CCH48725.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
Length = 299
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 180/291 (61%), Gaps = 6/291 (2%)
Query: 1 MTSKAKRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE--SS 57
+ S+A V L ++ R PA++H +M YSLLAGGKR+RPVL ++ +++G +
Sbjct: 7 LGSRAAVVESYLKAAMKDRGIPARLHASMEYSLLAGGKRLRPVLTLSWAQMLGEATITDA 66
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
MP A +LE IHT SL+HDDLP MD+DD RRGKP+NHK F E TAILAGD LL+ AF +
Sbjct: 67 VMPFAASLECIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDGLLTEAFGLM 126
Query: 118 AAKST--EISPDRVVRAIAELGSAVGSEGLVAGEIMDID-SEGKDVSLNELENIHLHKTA 174
+ S + DRV+RAIA L A G+ G+V G+ +D++ + G V+L +L +H KT
Sbjct: 127 STASIVKGLPADRVLRAIAVLAHAAGASGMVGGQAVDMELTGGTSVALEQLRIMHAMKTG 186
Query: 175 KLLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
L+ AA CG I+ G ++E R+Y + IG+ FQ+VDDILDV ++ LGK AG D
Sbjct: 187 ALITAACECGAILSGSTEADIENAREYGQAIGVAFQIVDDILDVVSDTETLGKPAGSDEA 246
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
K+TYP L+G++ ++ A + A E L + A L LA YI R
Sbjct: 247 MGKSTYPALIGLDKSKALARRHVDSALERLTTYAGAEHQFLADLARYIVDR 297
>gi|417842708|ref|ZP_12488789.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
gi|341951267|gb|EGT77844.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
Length = 296
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/285 (43%), Positives = 172/285 (60%), Gaps = 8/285 (2%)
Query: 7 RVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
R+N+ L+ + H A + +AM+Y+LL GGKRVRP L A+ +++G ++ + A A
Sbjct: 14 RINRFLEAQFEDIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYSAAA 73
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+E IH SL+HDDLP MD+D+ RRG PT H F E TAILAGDAL S AFE + K+ I
Sbjct: 74 IEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFEML-TKTPNI 132
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S ++ + + L G +G+ G+ +D+ SE K +SL+ELE IH +KT LL AA+ G
Sbjct: 133 SSEQKLALVQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLG 192
Query: 185 VIIG---GGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
I +E + + +YA IGL FQV DDILD+ S E+GK G DL DK+TYP
Sbjct: 193 FICSPHFADKRLE-QSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYP 251
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KL+G+ A++ A DL A EL A L LA +I +R+
Sbjct: 252 KLLGLSGAKQKAQDLYQSALSELEKIPFDTTA-LRALAEFIITRK 295
>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 297
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 170/279 (60%), Gaps = 13/279 (4%)
Query: 13 DETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV---ACALEMIH 69
D L P ++ EAMRYSLLAGGKR+RPVLC+ + ++A PV ACA+E IH
Sbjct: 26 DRLESLGTPPRLAEAMRYSLLAGGKRLRPVLCLTFADTTSRQSTAAAPVEDAACAVEYIH 85
Query: 70 TMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV 129
T SLVHDDLP MDNDD RRG+PTNHKV+GE A+LAGDALL+ AF V S
Sbjct: 86 TYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMALLAGDALLTEAFALVG------SGPEP 139
Query: 130 VRAI--AELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVII 187
VR + EL A G+ G+V G+++D+ +E + L+ L +H KT LL AA GV+
Sbjct: 140 VRGLLCGELARAAGAAGMVGGQVLDV-AEDRPAHLDYLVRLHRMKTGALLRAACRMGVLG 198
Query: 188 GGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
GG+ + R Y IGL FQ+ DDILDVT ++++LGK G D + + T+P ++G+E
Sbjct: 199 AGGDAETLARATTYGDAIGLAFQIADDILDVTATAEDLGKPVGADSAAGRFTFPAVVGLE 258
Query: 248 NARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+RK A D +A+A + E PL LA Y+ R+
Sbjct: 259 ASRKLASDKVAEAVAAVEPLE-GVGGPLAALARYVVERR 296
>gi|340363407|ref|ZP_08685743.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
gi|339885998|gb|EGQ75683.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
Length = 298
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 168/268 (62%), Gaps = 3/268 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P +HEAMRY L GGKR+RP+L +A+ EL D+++ A+EM+H SLVHDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAIEQAMAAIEMVHVYSLVHDDMPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RRGKPT H + E TA+L GDAL + AF+ V ++ T + +R + ++ L A
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAKAS 151
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGG-NMIEVERVR 199
GS G+ G+ +D+ + GK ++ +LE +H KT L+ AAVV G + + +V +
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLD 211
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
KYA +GL FQV+DD+LD + LGKTAGKD +DK TY KLMG++ AR +A L A+
Sbjct: 212 KYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAETLTAE 271
Query: 260 ATEELAYFEVARAAPLYHLAYYIASRQH 287
A L F A+A L LA ++ +R++
Sbjct: 272 AATLLEPFG-AKALHLRLLAEFVTARKN 298
>gi|386043674|ref|YP_005962479.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404410661|ref|YP_006696249.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404413439|ref|YP_006699026.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
gi|345536908|gb|AEO06348.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404230487|emb|CBY51891.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404239138|emb|CBY60539.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
Length = 293
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + R+ ++ E+M YS+ AGGKR+RP+L A+ + + + + A A
Sbjct: 13 KVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFS-ILAEDDNL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|337286891|ref|YP_004626364.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
gi|335359719|gb|AEH45400.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
Length = 300
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 177/290 (61%), Gaps = 5/290 (1%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ SK + VN+AL+ V ++ EAM YSL++GGKR+RP+L +A E GG
Sbjct: 11 LKSKQELVNRALEFYVPYLDGQARRLFEAMHYSLMSGGKRLRPILVMAGAEAAGGKPEDV 70
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+P ACA+E IHT SL+HDDLP MD+DD RRGKPT HK F E TAILAGD LL+ AF +A
Sbjct: 71 LPAACAIECIHTYSLIHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDGLLTHAFRLLA 130
Query: 119 AK--STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
+ + + + ++ I + A G G+VAG++ D+ +EG++V+ EL IH HKTA L
Sbjct: 131 HEELADKFPQENLLEGIRLVAEAAGLYGMVAGQMADLLAEGRNVTAEELAFIHRHKTAAL 190
Query: 177 LEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
+ A+V+ G + G E E + Y IG FQ++DDILD+T K LGK G DL
Sbjct: 191 IRASVLLGATLVGTGKKEKEALSSYGWNIGHAFQIIDDILDLTADEKTLGKPIGSDLKKK 250
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KATYP L G+E +R A LL +A +A +A L +AYY+ R+
Sbjct: 251 KATYPALFGLEASRAKARSLLEEALSSIAILG-DKAKTLADIAYYVLERK 299
>gi|418293779|ref|ZP_12905681.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065164|gb|EHY77907.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 295
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-VRAIAELGSAVG 141
+DD RRG+PT HK F E AILAGD L SLAFE +A + + +R A L A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 149
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRK 200
G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + + +
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLSQ 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L QA
Sbjct: 210 YARTIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L F+ A A PL LA YI R++
Sbjct: 270 LHALRPFDTA-AEPLRELARYIVERRN 295
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|420262480|ref|ZP_14765121.1| geranyltranstransferase [Enterococcus sp. C1]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|394770237|gb|EJF50041.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 298
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/244 (45%), Positives = 160/244 (65%), Gaps = 3/244 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDDLPCM 81
++ ++M+YS+ AGGKR+RP+L A+ ++A+ A ALEM+HT SL+HDDLP M
Sbjct: 31 RLFKSMQYSIQAGGKRIRPLLLAATVAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAM 90
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD RRGKPTNHKVFGE AILAGD LL+ AF+ VA EI ++ V + +L A G
Sbjct: 91 DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKAAG 148
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
++G+VAG+ DI E + +SL EL +IH KT +L+ AV+ G ++ + + ++
Sbjct: 149 TQGMVAGQAADIQGENQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 208
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A+ IGL FQ+ DD+LD T +++ELGK +D K+TYP L+G+ A++ + L +A
Sbjct: 209 AQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 268
Query: 262 EELA 265
E LA
Sbjct: 269 EILA 272
>gi|450000260|ref|ZP_21825030.1| putative farnesyl diphosphate synthase [Streptococcus mutans N29]
gi|449185958|gb|EMB87816.1| putative farnesyl diphosphate synthase [Streptococcus mutans N29]
Length = 289
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKSINQAIKHYYAQTHVSQDLVEAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDLPCMD 82
+ E+MRYS+ AGGKR+RP+L + S +G S S VA +LE++HT SL+HDDLP MD
Sbjct: 42 LKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMD 101
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND+ RRGKPTNHK FG+ A+LAGD LL+ +FE ++ T+I D+ ++ I++L A G
Sbjct: 102 NDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALAAGP 159
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V+G+ DI E K +L EL+++H KT LL A V G I+ + ++E +RKY
Sbjct: 160 QGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYG 219
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DD+LDV +K LGK KD + +K TYP L+G++ ++ ++L TE
Sbjct: 220 ENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL-NNTE 278
Query: 263 EL 264
L
Sbjct: 279 NL 280
>gi|456011703|gb|EMF45440.1| Octaprenyl-diphosphate synthase [Planococcus halocryophilus Or1]
Length = 293
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASC-ELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
P + E+M YSL AGGKR+RP+L +A E++G + A+ VA A+EMIHT SL+HDDLP
Sbjct: 28 PNSLKESMHYSLQAGGKRIRPILLLAVLHEMIGEEHPDALKVAAAIEMIHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSA 139
MD+DD RRG PTNHKVFGE AILAGDALL+ +F V A+ +S D VR I + +
Sbjct: 88 SMDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFG-VVARLEHVSSDDKVRLIDLMSVS 146
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
G+EG+V G+++DI+ E K + L ELE +H KT LL +++ G I+ E+ +
Sbjct: 147 AGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLKTGALLTYSILAGGILAQATNEEIVALS 206
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
++ + +GL FQ+ DDILDVT +S+ELGKTAGKD S+K+TYP L+ + A++
Sbjct: 207 QFGQHLGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPSLLTLPKAKE 258
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 152/241 (63%), Gaps = 2/241 (0%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
+AM+Y L GGKRVRP L + ++G +E + A A+E IH SL+HDDLP MD+D+
Sbjct: 37 KAMKYGALLGGKRVRPFLTYVTGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDE 96
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD-RVVRAIAELGSAVGSEG 144
RRG+PT H F E TA+LAGDAL +LAFE +A + I + + ++ I EL A G+ G
Sbjct: 97 LRRGQPTCHIAFDEATAVLAGDALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAG 156
Query: 145 LVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV-ERVRKYAR 203
+ G+ +D+D EGK + L +LE IH HKT L+ AV G + G +E+ ++ YA
Sbjct: 157 MCMGQALDLDGEGKHLGLTQLEQIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYAE 216
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEE 263
IGL FQV DDILDV ++ LGK G D+ DK+TYP L+G+E A++ A L +A +
Sbjct: 217 AIGLAFQVQDDILDVISDTETLGKPQGSDIALDKSTYPALLGLEGAQQKAQQLYQEAVQA 276
Query: 264 L 264
L
Sbjct: 277 L 277
>gi|450051589|ref|ZP_21840933.1| putative farnesyl diphosphate synthase [Streptococcus mutans NFSM1]
gi|449201783|gb|EMC02760.1| putative farnesyl diphosphate synthase [Streptococcus mutans NFSM1]
Length = 289
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIKHYYAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|340756656|ref|ZP_08693261.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 164/271 (60%), Gaps = 1/271 (0%)
Query: 17 QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHD 76
+L +P I E M+Y++L GGKR+RP+L +++ D+ + A A+EMIH+ SLVHD
Sbjct: 24 ELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDKEKGIASAAAIEMIHSYSLVHD 83
Query: 77 DLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAEL 136
DLP +DNDD+RRGK T HK FGE IL GDALL+ AF + K+ + +++V +
Sbjct: 84 DLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLT 143
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
S G G++ G+++DI SEGK + L L+ +H +KT KL++ V IIG + E E
Sbjct: 144 SSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGKLMKLPVELACIIGDADREERE 203
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
+ K++ IGL FQ+ DDILD+ LGK G D+ K+TYP L+G+ ++ +
Sbjct: 204 VLVKFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKSTYPSLIGMAESKTLLKET 263
Query: 257 LAQATEELA-YFEVARAAPLYHLAYYIASRQ 286
+A+A +A F V ++ L LA YI +R
Sbjct: 264 IAEAKMIVAEKFGVEKSNILLELADYIGNRN 294
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-VRAIAELGSAVG 141
+DD RRG+PT HK F E AILAGD L SLAFE +A + + +R A L A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 149
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRK 200
G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + + +
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQ 209
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L QA
Sbjct: 210 YARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA 269
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L F+ A A PL LA YI R++
Sbjct: 270 LHALRPFDFA-AEPLRELARYIVERRN 295
>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
Length = 285
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 163/248 (65%), Gaps = 4/248 (1%)
Query: 6 KRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
K ++++L + + R PA + E+M YS+ AGGKR+RP+L A+ + + + + A
Sbjct: 5 KYIDESLFKEISERKIEPA-LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 63
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
ALEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+
Sbjct: 64 ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDEN 122
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 123 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 182
Query: 184 GVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L
Sbjct: 183 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGL 242
Query: 244 MGIENARK 251
+ ++ A++
Sbjct: 243 LTLDGAKR 250
>gi|416051604|ref|ZP_11577652.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993037|gb|EGY34414.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 296
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 173/285 (60%), Gaps = 6/285 (2%)
Query: 6 KRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+R+N+ L + PA + EAM+Y LL GGKR+RP L A+ +++G D + A
Sbjct: 13 QRINQFLADQFAYIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAQLDYAAA 72
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E IH SL+HDDLP MD+D+ RRG T H F E TAILAGDAL +LAFE +
Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFE-ILTDIPH 131
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVC 183
+S ++ + I L +A G +G+ G+ +D+ SE K +SL ELE IHL+KT LL AA+
Sbjct: 132 LSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLAAALKM 191
Query: 184 GVIIGG--GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
G I + +++ +YA IGL FQV DDILD+ S LGKTAG DL +DK+TYP
Sbjct: 192 GFICSPHFADTALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTAGSDLTADKSTYP 251
Query: 242 KLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KL+G+E A++ A +L A EL A LY LA +I R+
Sbjct: 252 KLLGLEGAKQKAQELYQTALAELKNLPFNTTA-LYALAEFIVKRK 295
>gi|449992240|ref|ZP_21822252.1| putative farnesyl diphosphate synthase [Streptococcus mutans NVAB]
gi|449180004|gb|EMB82187.1| putative farnesyl diphosphate synthase [Streptococcus mutans NVAB]
Length = 289
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIRHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|339495741|ref|YP_004716034.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803113|gb|AEJ06945.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 296
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++SA ACA+E+IH SLVHDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV-VRAIAELGSAVG 141
+DD RRG+PT HK F E AILAGD L SLAFE +A + + +R A L A G
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 150
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERVRK 200
G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + + +
Sbjct: 151 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQ 210
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQA 260
YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G++ A+ +A +L QA
Sbjct: 211 YARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA 270
Query: 261 TEELAYFEVARAAPLYHLAYYIASRQH 287
L F+ A A PL LA YI R++
Sbjct: 271 LHALRPFDFA-AEPLRELARYIVERRN 296
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 165/269 (61%), Gaps = 5/269 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + +AMRYSLL GGKR+RP L A+ ++G D + +A A+E IH SL+HDDLP
Sbjct: 30 PAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPA 89
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDND RR PT H F E TAILAGDAL S AFE +A + I+ + + L +A
Sbjct: 90 MDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLA--KSPIADQQKILQFQLLANAS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEV--ERV 198
G+EG+ G+ +D+ SE K + L ELE IH +KT L+ AAV+ G E +++
Sbjct: 148 GAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKL 207
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
++ IGL FQV DDILD+T S++ELGK AG DL + K+TYP+L+G+ A++ A L
Sbjct: 208 ISFSAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLLGLAQAKEKASALYY 267
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
A L+ E +A L LA +I R++
Sbjct: 268 SAKSILSELEFDTSA-LAALAEFIVKRRN 295
>gi|419840652|ref|ZP_14364040.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386907595|gb|EIJ72302.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 290
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 159/266 (59%), Gaps = 2/266 (0%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M + + N+ L+ET+ Q P I E M+Y+ L GGKR+RP L S L+G + + +
Sbjct: 1 MRNYREYFNEKLEETLAQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGL 60
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE-HVA 118
P A ALEMIH+ SLVHDDLP MDND++RRG+ T HK FGE AIL GDALL+ AF V
Sbjct: 61 PFALALEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVR 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++S ++++ +A G +G++ G+ MD+ EGK +S L IH HKT +LL
Sbjct: 121 GSMGKVSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLL 180
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
++ I+G ++ + + + Y R IGL FQ+ DDILDV ++GK D K+
Sbjct: 181 LPILVACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDFAQMGKAVKSDEKLQKS 240
Query: 239 TYPKLMGIENARKFACDLLAQATEEL 264
TYP + G+E +++ + L +A + L
Sbjct: 241 TYPSIFGLEKSKEMLAESLREARKAL 266
>gi|403053079|ref|ZP_10907563.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter bereziniae LMG 1003]
Length = 303
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 161/254 (63%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES--SAMPVACALEMIHTMSLVHDDL 78
P + A+ ++++ GGKRVRP L A+ +L + + + A A+E IH SL HDDL
Sbjct: 33 PEPLKSAVHHTVMLGGKRVRPALSYATSQLKADNPNFAAVRRAAVAIEFIHCYSLAHDDL 92
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK----STEISPDRVVRAIA 134
PCMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + +++ +
Sbjct: 93 PCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGQTVDQAIILKQMQ 152
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV-CGVIIGGGNMI 193
L +A S +V G+++D+ +EGK V LENIH +KT L++AA++ V I G
Sbjct: 153 ILATA--SSKMVCGQVLDLQAEGKHVDQEHLENIHRNKTGALIQAAIMMAAVTIFSGTDQ 210
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILDV ++ LGKTAGKD DK+TYP LMG+ENA+ +A
Sbjct: 211 AIPQLRQYGQAIGLAFQVQDDILDVISDTESLGKTAGKDEQVDKSTYPALMGLENAQIYA 270
Query: 254 CDLLAQATEELAYF 267
L QA + LAYF
Sbjct: 271 QQLHDQAFKALAYF 284
>gi|404330150|ref|ZP_10970598.1| geranylgeranyl pyrophosphate synthase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 294
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 1 MTSKAKRVNKALDETV-QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M SK + + L + + Q P K+ E+M YSL+AGGKR+RP+L A+ + +G E +
Sbjct: 9 MASKKVWLEEKLPDFLEQASIPGKLKESMIYSLMAGGKRIRPILLFATLDALGCREEKGL 68
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
A LEMIHT SL+HDDLP MDNDD RRGKPTNH +FGE TA+LAGD LL+ AF+ VA
Sbjct: 69 STAIGLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHVIFGEATAVLAGDGLLTAAFDLVAG 128
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
++ + R + L +A G EG+V G+ D+++E K ++++EL ++H KT +L+
Sbjct: 129 DPA-LNAEIRCRILQMLANAAGPEGMVGGQEDDLEAEEKTLTIDELMSVHRRKTGRLICF 187
Query: 180 AVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
V +I G + + +YA +GL FQ+ DDILD++ S +ELGK G DLV+ K T
Sbjct: 188 PVAAAAVIAGAPEHQRRALEQYAGHLGLAFQIGDDILDISGSEQELGKPVGSDLVNHKNT 247
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
Y L+ +E ARK D +A A + L + L LA Y+ +R H
Sbjct: 248 YVSLLTMEGARKKLEDHVASAKKALRESGIHYGV-LSDLADYLQTRTH 294
>gi|397649304|ref|YP_006489831.1| farnesyl diphosphate synthase [Streptococcus mutans GS-5]
gi|449876531|ref|ZP_21782838.1| putative farnesyl diphosphate synthase [Streptococcus mutans S1B]
gi|449887470|ref|ZP_21786851.1| putative farnesyl diphosphate synthase [Streptococcus mutans SA41]
gi|449911822|ref|ZP_21795235.1| putative farnesyl diphosphate synthase [Streptococcus mutans
OMZ175]
gi|449932877|ref|ZP_21803004.1| putative farnesyl diphosphate synthase [Streptococcus mutans 3SN1]
gi|449937886|ref|ZP_21804802.1| putative farnesyl diphosphate synthase [Streptococcus mutans 2ST1]
gi|449940883|ref|ZP_21805262.1| putative farnesyl diphosphate synthase [Streptococcus mutans 11A1]
gi|449996002|ref|ZP_21823293.1| putative farnesyl diphosphate synthase [Streptococcus mutans A9]
gi|450043069|ref|ZP_21837736.1| putative farnesyl diphosphate synthase [Streptococcus mutans T4]
gi|450072677|ref|ZP_21848712.1| putative farnesyl diphosphate synthase [Streptococcus mutans M2A]
gi|450077348|ref|ZP_21850384.1| putative farnesyl diphosphate synthase [Streptococcus mutans N3209]
gi|450116063|ref|ZP_21864285.1| putative farnesyl diphosphate synthase [Streptococcus mutans ST1]
gi|450124901|ref|ZP_21867310.1| putative farnesyl diphosphate synthase [Streptococcus mutans U2A]
gi|450153203|ref|ZP_21877080.1| putative farnesyl diphosphate synthase [Streptococcus mutans 21]
gi|392602873|gb|AFM81037.1| farnesyl diphosphate synthase [Streptococcus mutans GS-5]
gi|449152787|gb|EMB56486.1| putative farnesyl diphosphate synthase [Streptococcus mutans 11A1]
gi|449160826|gb|EMB64063.1| putative farnesyl diphosphate synthase [Streptococcus mutans 3SN1]
gi|449163763|gb|EMB66855.1| putative farnesyl diphosphate synthase [Streptococcus mutans 2ST1]
gi|449183814|gb|EMB85785.1| putative farnesyl diphosphate synthase [Streptococcus mutans A9]
gi|449196985|gb|EMB98212.1| putative farnesyl diphosphate synthase [Streptococcus mutans T4]
gi|449210866|gb|EMC11294.1| putative farnesyl diphosphate synthase [Streptococcus mutans M2A]
gi|449211291|gb|EMC11701.1| putative farnesyl diphosphate synthase [Streptococcus mutans N3209]
gi|449227327|gb|EMC26757.1| putative farnesyl diphosphate synthase [Streptococcus mutans ST1]
gi|449233200|gb|EMC32280.1| putative farnesyl diphosphate synthase [Streptococcus mutans U2A]
gi|449239130|gb|EMC37860.1| putative farnesyl diphosphate synthase [Streptococcus mutans 21]
gi|449252209|gb|EMC50195.1| putative farnesyl diphosphate synthase [Streptococcus mutans S1B]
gi|449252752|gb|EMC50723.1| putative farnesyl diphosphate synthase [Streptococcus mutans SA41]
gi|449257823|gb|EMC55440.1| putative farnesyl diphosphate synthase [Streptococcus mutans
OMZ175]
Length = 289
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIRHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|378953114|ref|YP_005210602.1| IspA protein [Pseudomonas fluorescens F113]
gi|359763128|gb|AEV65207.1| IspA [Pseudomonas fluorescens F113]
Length = 295
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 177/288 (61%), Gaps = 5/288 (1%)
Query: 3 SKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
S RVN ALD P A+++EAMRYS++ GGKRVRP+L A+CE +GG A
Sbjct: 8 SSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQANG 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF +
Sbjct: 68 AACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSALLDP 127
Query: 121 STEISPDRV-VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ P +V + ++ L A G G+V G+ +D+ S G + + LE +H HKT L+EA
Sbjct: 128 ALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGALIEA 187
Query: 180 AVVCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+V G + G +++ ++ YAR IGL FQV DDILDV ++ LGK G D+ DK
Sbjct: 188 SVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+G++ A+ +A +L QA L F+ A A PL LA YI R+
Sbjct: 248 TYPALLGLDAAKAYALELRDQALAALRPFDAA-AEPLRDLARYIVERR 294
>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
Length = 293
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + R+ ++ E+M YS+ AGGKR+RP+L A+ + + + + A A
Sbjct: 13 KVIDESLFKEINERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDENL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 27 AMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDF 86
+M YSL+ GGKR+RPVL +A ELVGG + A A+E+IHT SL+HDDLP MD+DD+
Sbjct: 30 SMNYSLVGGGKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDDLPAMDDDDY 89
Query: 87 RRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLV 146
RRGK +NHKVFGE AILAGDALL+LAFE +A S I + +R I E A G +G+V
Sbjct: 90 RRGKLSNHKVFGEAGAILAGDALLTLAFELLAGPSA-IEAQKKLRVIRETAQAAGWQGMV 148
Query: 147 AGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYARCIG 206
G+ +D ++ +L ++E +H KT LL+A+ G I+GGG+ E+E + YA +G
Sbjct: 149 GGQSLDTLGNLENSTLADIEQVHHLKTGALLKASARLGAILGGGSEPEIEILTSYALYLG 208
Query: 207 LLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAY 266
L FQ+ DDILDV S +GK+AGKD S K TYP L+G+E AR+ + A E L+
Sbjct: 209 LAFQIKDDILDVVGESAVIGKSAGKDQKSGKPTYPSLLGLEGAREQLEKTIFLAKESLSC 268
Query: 267 FEVARAAPLYHLAYYIASRQH 287
F +AA L LA Y A R +
Sbjct: 269 FG-PKAAFLLSLADYTAERTN 288
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 1/250 (0%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M + +V L V+ PA + AMRY++L GGKR+RP+L +A+CE VGG +A+
Sbjct: 12 MRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALR 71
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDD+PCMDND RRGKPT H FG+ A+LAGDAL +LAFE + +
Sbjct: 72 AACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPE 131
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+ P R L A G++G+ G+ +D+ S G+ ++ ++L ++H KT LL A+
Sbjct: 132 DG-VPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRAS 190
Query: 181 VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
VV G G + + + +Y IGL FQVVDD+LDVT+ S LGKTAGKD SDK TY
Sbjct: 191 VVMGAACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTY 250
Query: 241 PKLMGIENAR 250
LMG++ AR
Sbjct: 251 VSLMGLDAAR 260
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 178/287 (62%), Gaps = 7/287 (2%)
Query: 6 KRVNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
+RV+ L+ P ++++AMRYS++ GGKRVRP+L A+CE + GD+++A AC
Sbjct: 11 QRVDGCLEALFVAPQPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKANADGAAC 70
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE 123
A+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAFE + A+
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAM-AQDRH 129
Query: 124 ISPDRV--VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
PD +R + L A G G+V G+ +D+ S G + + LE +H HKT L+EA+V
Sbjct: 130 NPPDATLRLRMFSVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASV 189
Query: 182 VCGVIIGG-GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
G + G + + + +YAR IGL FQV DDILDV + LGK G D+ DK TY
Sbjct: 190 QLGALASGHADADSLAALSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTY 249
Query: 241 PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
P L+G++ A+ +A +L QA L F+ A A PL LA YI R++
Sbjct: 250 PALLGMDAAKVYASELRDQALHALQPFDEA-AEPLRELARYIVERRN 295
>gi|422809443|ref|ZP_16857854.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
gi|378753057|gb|EHY63642.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
Length = 293
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ E+M YS+ AGGKR+RP+L A+ + + + + A ALEMIHT SL+HDDLP MDN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +S + + I ++ + G+E
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDENLSFETRIALINQISFSSGAE 150
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G++ D+++E K V+L EL +IH KT +LL AV I + + +R+R +A
Sbjct: 151 GMVGGQLADMEAENKQVALEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAE 210
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A++
Sbjct: 211 NIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKR 258
>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
Length = 334
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 183/326 (56%), Gaps = 42/326 (12%)
Query: 1 MTSKAKRVNKALDETVQ--LRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+ +KA V K L + + P I ++M YSL AGGKRVRPVL +A+ E G +
Sbjct: 8 LKTKAAFVEKGLSKYILKIANSPEVIKDSMAYSLEAGGKRVRPVLVMAAAEAFGKKAADV 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
MP ACA+EM+HT SL+HDDLP MDND RRGKPTNHKV+GED A+LAGDALL+ AFE A
Sbjct: 68 MPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLAGDALLTYAFEVFA 127
Query: 119 AKS--TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG------------------- 157
I ++A+ + VGSEG+V G++ DI +EG
Sbjct: 128 QNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKFKRITAVKKESKAL 187
Query: 158 --------------KDVSLNE-LENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
K+VS L IH +KT L+ +++ G ++ G + + +RKY
Sbjct: 188 SKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAGASEADRANMRKYG 247
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQ+VDDILDVT S K+LGK+ G D + K T+ L G+E +RK+A +L +A
Sbjct: 248 NAMGLAFQIVDDILDVTVSEKKLGKS-GSDKENAKLTFVSLYGLEVSRKYAKAVLGEAVN 306
Query: 263 ELAYFEV---ARAAPLYHLAYYIASR 285
L + +AAPLY +A + +R
Sbjct: 307 ALNKVKAINKKKAAPLYEMADFFLTR 332
>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|386732101|ref|YP_006205597.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|405749705|ref|YP_006673171.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|405752580|ref|YP_006676045.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406704134|ref|YP_006754488.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|417314624|ref|ZP_12101320.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|417317507|ref|ZP_12104124.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|424714237|ref|YP_007014952.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
gi|424823124|ref|ZP_18248137.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|384390859|gb|AFH79929.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|404218905|emb|CBY70269.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|404221780|emb|CBY73143.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406361164|emb|CBY67437.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|424013421|emb|CCO63961.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
Length = 293
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 6 KRVNKALDETVQLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA 64
K ++++L + + R+ ++ E+M YS+ AGGKR+RP+L A+ + + + + A A
Sbjct: 13 KVIDESLFKEISERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATA 72
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
LEMIHT SL+HDDLP MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +
Sbjct: 73 LEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDENL 131
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCG 184
S + + I ++ + G+EG+V G++ D+++E K V+L EL +IH KT +LL AV
Sbjct: 132 SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSA 191
Query: 185 VIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
I + + +R+R +A IG+ FQ+ DDILDV ++GK G D +K+TYP L+
Sbjct: 192 AKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLL 251
Query: 245 GIENARK 251
++ A++
Sbjct: 252 TLDGAKR 258
>gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 172/290 (59%), Gaps = 7/290 (2%)
Query: 1 MTSKAKRVNKALDETVQL--RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
T +R + L+ T+ + + P ++H AMRY++L+GGKR+RP+L A+ L DE
Sbjct: 6 FTRWCQRTDSYLERTLSIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E+IH SLVHDDLP MD+D RRG+PT H F E TAIL GDAL +LAFE +A
Sbjct: 66 DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ S + + L A G G+ G+ +DID+ G+ +L LE +H K+ L+
Sbjct: 126 DAPADTS--LRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALKSGTLMR 183
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AAV G + G + ++ + +A +GL FQV DDILD+ SS++LGKTAGKD + K+
Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKS 243
Query: 239 TYPKLMGIENARKFACDLLAQATEEL-AYFEVARAAPLYHLAYYIASRQH 287
T+P L+ +E A+ + +L + +L Y E RAAPL LA R H
Sbjct: 244 TFPALLSVEGAKCYLQELAERLYTQLHPYGE--RAAPLTALARLAVERAH 291
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|417810499|ref|ZP_12457178.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|335349295|gb|EGM50795.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
Length = 297
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDLPCMD 82
+ E+MRYS+ AGGKR+RP+L + S +G S S VA +LE++HT SL+HDDLP MD
Sbjct: 34 LKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMD 93
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND+ RRGKPTNHK FG+ A+LAGD LL+ +FE ++ T+I D+ ++ I++L A G
Sbjct: 94 NDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALAAGP 151
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V+G+ DI E K +L EL+++H KT LL A V G I+ + ++E +RKY
Sbjct: 152 QGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYG 211
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DD+LDV +K LGK KD + +K TYP L+G++ ++ ++L TE
Sbjct: 212 ENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL-NNTE 270
Query: 263 EL 264
L
Sbjct: 271 NL 272
>gi|404407800|ref|YP_006690515.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
gi|404241949|emb|CBY63349.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
Length = 293
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
PA + E+M YS+ AGGKR+RP+L A+ + + + + A ALEMIHT SL+HDDLP
Sbjct: 30 PA-LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPA 88
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MDNDD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +S + + I ++ +
Sbjct: 89 MDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDENLSFETRIALINQISFSS 147
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRK 200
G+EG+V G++ D+++E K V+L EL +IH KT +LL AV I + + +R+R
Sbjct: 148 GAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRI 207
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+A IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A++
Sbjct: 208 FAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKR 258
>gi|402569609|ref|YP_006618953.1| polyprenyl synthetase [Burkholderia cepacia GG4]
gi|402250806|gb|AFQ51259.1| Polyprenyl synthetase [Burkholderia cepacia GG4]
Length = 294
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 175/291 (60%), Gaps = 11/291 (3%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S RV AL ETV P ++HEAMRY++L GGKRVRP+LC A+ EL G E
Sbjct: 7 MRSVLDRVEDALGHYLPAETVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATE 63
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
++ A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 64 AARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFV 123
Query: 116 HVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
+ + ++P + + EL A GS G+ G+ +D+ S G ++ +LE +H KT
Sbjct: 124 AL-TDADALAPAQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGA 182
Query: 176 LLEAAVVCGVIIGGGNMIE-VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LL AAV G + G E + + YA +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 183 LLRAAVRMGALAGETPSAETMSALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAA 242
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+DK TY ++G++ +R+ A L A+A + L F ARA L LA + +R
Sbjct: 243 NDKPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDLPCMD 82
+ E+MRYS+ AGGKR+RP+L + S +G S S VA +LE++HT SL+HDDLP MD
Sbjct: 14 LKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMD 73
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
ND+ RRGKPTNHK FG+ A+LAGD LL+ +FE ++ T+I D+ ++ I++L A G
Sbjct: 74 NDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALAAGP 131
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
+G+V+G+ DI E K +L EL+++H KT LL A V G I+ + ++E +RKY
Sbjct: 132 QGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYG 191
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
GL FQ+ DD+LDV +K LGK KD + +K TYP L+G++ ++ ++L TE
Sbjct: 192 ENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL-NNTE 250
Query: 263 EL 264
L
Sbjct: 251 NL 252
>gi|24379060|ref|NP_721015.1| farnesyl diphosphate synthase [Streptococcus mutans UA159]
gi|449864287|ref|ZP_21778249.1| putative farnesyl diphosphate synthase [Streptococcus mutans U2B]
gi|449869300|ref|ZP_21780036.1| putative farnesyl diphosphate synthase [Streptococcus mutans 8ID3]
gi|449985886|ref|ZP_21819923.1| putative farnesyl diphosphate synthase [Streptococcus mutans NFSM2]
gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
gi|449158325|gb|EMB61744.1| putative farnesyl diphosphate synthase [Streptococcus mutans 8ID3]
gi|449178638|gb|EMB80890.1| putative farnesyl diphosphate synthase [Streptococcus mutans NFSM2]
gi|449265029|gb|EMC62360.1| putative farnesyl diphosphate synthase [Streptococcus mutans U2B]
Length = 289
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKSINQAIKHYYAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|336421588|ref|ZP_08601745.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000472|gb|EGN30622.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 314
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 162/265 (61%), Gaps = 6/265 (2%)
Query: 1 MTSKAKRVNKALDETV--QLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
M K +++ L E + Q + I EAM YSLLAGGKR+RP+L + L GG+
Sbjct: 25 MKHKVEKIEGILTEYLPRQEGFQSIIMEAMNYSLLAGGKRLRPMLMNETYRLFGGEGPLI 84
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
P A+EMIHT SLVHDDLP MDND++RRG+ T H V+GED ILAGDALL+ AFE A
Sbjct: 85 RPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFE-TA 143
Query: 119 AKSTEISPDR---VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAK 175
K+ + P+ + RA+ LG G G++ G+++D+ G + L+ I+ KT+
Sbjct: 144 FKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDTIYELKTSA 203
Query: 176 LLEAAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
L+EA+++ G I+GG + EV+ + K AR +G+ FQ+ DDILDVT + + LGK D +
Sbjct: 204 LIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTSTKEVLGKPTHSDEKN 263
Query: 236 DKATYPKLMGIENARKFACDLLAQA 260
+K TY LMG A + +L QA
Sbjct: 264 EKTTYVTLMGTAEAGRMVEELSDQA 288
>gi|359300112|ref|ZP_09185951.1| geranyltranstransferase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305168|ref|ZP_10824227.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
gi|400376281|gb|EJP29168.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
Length = 295
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 175/283 (61%), Gaps = 4/283 (1%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
KR+N + ++ A++ EAM Y++L GGKRVRP L A+ ++G A A+
Sbjct: 14 KRINDFIQSALKHYPNARLTEAMAYAVLLGGKRVRPFLIYATGRMLGVSLDKLDTSAAAM 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E IH SLVHDDLP MD+D RRG PT H F E TAILAGDAL S+AF + + +++
Sbjct: 74 ESIHAYSLVHDDLPAMDDDALRRGNPTCHIAFDEATAILAGDALQSMAFSLI-SDDEKLT 132
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
+ V I+ L +A G++G+ G+ +D+ +E K VSL ELE IH +KT L+E +V+ G+
Sbjct: 133 DSQKVAQISALATAAGAKGMCFGQSLDLIAEDKSVSLAELEQIHRNKTGALIETSVMMGL 192
Query: 186 IIG-GGNMIEVE-RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ N + + ++++YA+ IGL FQV DDILDV ++++GK G D K+TYPKL
Sbjct: 193 NLSQSANDMHIRIQLQRYAQAIGLAFQVQDDILDVIGETEKIGKQVGADEYLHKSTYPKL 252
Query: 244 MGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
+G+E A++ A DL QA + LA +A L LA +I R+
Sbjct: 253 LGLEGAKQKAQDLYEQALDALAQLSFDTSA-LKALADFIIHRE 294
>gi|398798195|ref|ZP_10557496.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. GM01]
gi|398100912|gb|EJL91140.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. GM01]
Length = 299
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 159/270 (58%), Gaps = 16/270 (5%)
Query: 1 MTSKAKRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+++ +RVN+AL + + + AM Y L GGKR+RP L A+ E++ D +S
Sbjct: 7 LSAYHQRVNQALTRLIDPLPFQSSPLVNAMEYGALLGGKRLRPFLVYATGEMLKADAASL 66
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
A A+E IH SL+HDDLP MD+D RRG+PT H +GEDTAILAGDAL +LAF +A
Sbjct: 67 DVPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILA 126
Query: 119 AKSTE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
+ +S + + I+EL A G G+ G+ +D+ +EGK + L +LE IH HKT L+
Sbjct: 127 DQPMPGVSAEARIAMISELAQASGVAGMCGGQALDLAAEGKRIDLAQLEQIHRHKTGALI 186
Query: 178 EAAVVCGVIIGGGNMIEVERVR-------KYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
AAV G + G ER R YA IGL FQV DDILDV + LGKT G
Sbjct: 187 RAAVRLGALAAG------ERGRAALPVLDTYANAIGLAFQVQDDILDVVGDTAVLGKTQG 240
Query: 231 KDLVSDKATYPKLMGIENARKFACDLLAQA 260
D K+TYP LMG+ENAR A DL +A
Sbjct: 241 SDQALGKSTYPALMGLENARSKAWDLYQEA 270
>gi|450182046|ref|ZP_21888132.1| putative farnesyl diphosphate synthase [Streptococcus mutans 24]
gi|449245288|gb|EMC43629.1| putative farnesyl diphosphate synthase [Streptococcus mutans 24]
Length = 289
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 4/262 (1%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA- 58
M K K +N+A+ H ++ + EA+ YS+ AGGKR+RP+L + + G + A
Sbjct: 1 MKDKIKYINQAIRHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
VA +LEMIHT SLVHDDLP MDNDD+RRG+ TNHK FGE TAILAGD+L F +A
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA 120
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
++ D ++ +AEL A GS G+V G+++DI E ++L++L IH +KT KLL
Sbjct: 121 --KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLVQIHANKTGKLLT 178
Query: 179 AAVVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
V II + + R+R+ +GL FQV DDILDVT S ELGKT KD+ +DK+
Sbjct: 179 FPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKS 238
Query: 239 TYPKLMGIENARKFACDLLAQA 260
TYP L+G++ + D L QA
Sbjct: 239 TYPSLLGLDKSYAILEDSLNQA 260
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+ + I EAM YSL+AGGKR+RP+L + + L GG+ P A+EMIHT SLVHDDLP
Sbjct: 28 YQSVIMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD---RVVRAIAEL 136
MDND++RRG+ T H V+GED ILAGDALL+ AFE A K+ E P+ R+ +A+ L
Sbjct: 88 AMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFE-TACKAFEQFPEESLRIGQAMRVL 146
Query: 137 GSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVE 196
G G++ G+++D+ G + L+ I KT L+E+A++ G I+ G + +V+
Sbjct: 147 ARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVK 206
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++K A IG+ FQ+ DDILDVT ++++LGK D ++K TY L GIE A K +
Sbjct: 207 SMQKIAGKIGMAFQIQDDILDVTSTTEQLGKPVHSDEKNEKTTYVTLKGIEQAHKDVERM 266
Query: 257 LAQATEELAYF 267
+A +EL F
Sbjct: 267 TEEAIDELKKF 277
>gi|217964491|ref|YP_002350169.1| geranyltranstransferase [Listeria monocytogenes HCC23]
gi|386008135|ref|YP_005926413.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|386026735|ref|YP_005947511.1| geranyltranstransferase [Listeria monocytogenes M7]
gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|336023316|gb|AEH92453.1| geranyltranstransferase [Listeria monocytogenes M7]
Length = 293
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
+ E+M YS+ AGGKR+RP+L A+ + + + + A ALEMIHT SL+HDDLP MDN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
DD+RRGK TNHKVFG+ TAILAGDALL+LAF + A+ +S + + I ++ + G+E
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFS-ILAEDENLSFETRIALINQISFSSGAE 150
Query: 144 GLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYAR 203
G+V G++ D+++E K V+L EL +IH KT +LL AV I + + +R+R +A
Sbjct: 151 GMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAE 210
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
IG+ FQ+ DDILDV ++GK G D +K+TYP L+ ++ A++
Sbjct: 211 NIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKR 258
>gi|425744588|ref|ZP_18862643.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
gi|425490184|gb|EKU56484.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
Length = 305
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 169/258 (65%), Gaps = 15/258 (5%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG-DESSAMPVACALEMIHTMSLVHDDLP 79
P + A+ ++++ GGKRVRP LC A+ L + ++A A A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYAAASLQPNHNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK-------STEISPDRVVRA 132
CMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ TE + V++
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDEQGQGTEAAI--VLKQ 150
Query: 133 IAELGSAVGSEGLVAGEIMDIDSE--GKDVSLNELENIHLHKTAKLLEAAVVCG-VIIGG 189
+ L +A S +V G+++D+ +E GK V+ ELENIH +KT L++AA++ G V I
Sbjct: 151 VQILATA--SSKMVCGQVLDLQAEGAGKQVNQAELENIHRNKTGALIQAAIMMGAVTIFA 208
Query: 190 GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA 249
G + ++R++ + IGL FQV DDILD+T S++ LGKTAGKD + K+TYP LMG+E A
Sbjct: 209 GTDQAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQTQKSTYPALMGLEQA 268
Query: 250 RKFACDLLAQATEELAYF 267
+ +A L QA + LAYF
Sbjct: 269 QAYAQSLHDQAFDALAYF 286
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/244 (45%), Positives = 159/244 (65%), Gaps = 3/244 (1%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM-PVACALEMIHTMSLVHDDLPCM 81
++ E+M+YS+ AGGKR+RP+L A+ ++A+ A ALEM+HT SL+HDDLP M
Sbjct: 28 RLFESMQYSIQAGGKRIRPLLLAATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAM 87
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
DNDD RRGKPTNHKVFGE AILAGD LL+ AF+ VA EI ++ V + +L A G
Sbjct: 88 DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKAAG 145
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKY 201
++G+VAG+ DI E + + L EL +IH KT +L+ AV+ G ++ + + ++
Sbjct: 146 TQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 205
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
A+ IGL FQ+ DD+LD T +++ELGK +D K+TYP L+G+ A++ + L +A
Sbjct: 206 AQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 265
Query: 262 EELA 265
E LA
Sbjct: 266 EILA 269
>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
Length = 294
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/292 (47%), Positives = 172/292 (58%), Gaps = 13/292 (4%)
Query: 1 MTSKAKRVNKALD-----ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE 55
M S +RV AL ETV PA++HEAMRY+ L GGKRVRP+LC A+ EL G E
Sbjct: 7 MRSVLERVETALGHYLPAETVA---PAQLHEAMRYAALGGGKRVRPLLCHAAGELTGASE 63
Query: 56 SSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFE 115
++ A ALEMIH SLVHDD+PCMD+D RRGKPT H + E TA+L GDAL S AF
Sbjct: 64 AALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAF- 122
Query: 116 HVAAKSTEISP-DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTA 174
VA P DR + EL A GS G+ G+ +D+ S G +S + LE +H KT
Sbjct: 123 -VALTDAAALPLDRQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTG 181
Query: 175 KLLEAAVVCGVIIGGGNMIEVER-VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 233
LL A+V G + G + R + YA +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 182 ALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 241
Query: 234 VSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+DK TY ++G++ +R A L A A L F ARA L LA + +R
Sbjct: 242 ANDKPTYVSIIGLDASRALAAQLRADARAALEPFG-ARARRLAELADLVVNR 292
>gi|220904228|ref|YP_002479540.1| polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 166/266 (62%), Gaps = 3/266 (1%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
P ++ ++M YSL AGGKR+RPVLC+++ L G A+P A A+EMIHT SLVHDDLP
Sbjct: 33 PQRLKDSMLYSLQAGGKRLRPVLCLSAAALCGLPLRDALPFASAIEMIHTYSLVHDDLPA 92
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
MD+DD RRGKP+NHK F E TAILAGD LL+ AF + + ++P RV+RAI+EL A
Sbjct: 93 MDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFLMMC--RSPLAPPRVLRAISELALAA 150
Query: 141 GSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVR 199
GS G+V G+ D+ GKD VS+ +L IH KT LL A+ VCG ++ G + ++ +
Sbjct: 151 GSSGMVGGQEWDMIFTGKDLVSIEDLRGIHAMKTGALLRASCVCGAMLAGASDEDLAAIG 210
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQ 259
Y +G+ FQ+ DDILDV + LGK G D K TYP L+G++ +R A + +
Sbjct: 211 SYGAALGVAFQIADDILDVVADTATLGKPVGSDAAQGKKTYPALLGLDQSRALAREQAEK 270
Query: 260 ATEELAYFEVARAAPLYHLAYYIASR 285
A LA F A L LA Y +R
Sbjct: 271 AKAALAGFSGDEADFLRALADYTVTR 296
>gi|420184492|ref|ZP_14690601.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM040]
gi|394257143|gb|EJE02065.1| geranyltranstransferase [Staphylococcus epidermidis NIHLM040]
Length = 293
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 171/279 (61%), Gaps = 11/279 (3%)
Query: 8 VNKALDETVQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+N +L++++Q P K + E+M+YSL AGGKR+RPV+ + + +++ D + A AL
Sbjct: 13 INTSLNKSIQ-SSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALAL 71
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SL+HDDLP MDNDD+RRGK T HKV+GE AILAGDALL+ AFE V+ +T I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTIHKVYGEWKAILAGDALLTKAFELVSNDTT-IE 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGV 185
V I L A G G+V G+ +D++SEGK + L LE+IH KT LL +V+ V
Sbjct: 131 DSVKVSIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAV 190
Query: 186 IIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
I + + +++ +G++FQ+ DD+LDV +LGK G D+V+ K+TY L+G
Sbjct: 191 DIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 250
Query: 246 IENARK-------FACDLLAQATEELAYFEVARAAPLYH 277
E A + A + L Q +++ E++ L++
Sbjct: 251 KEGAEEKLNNHQCLAMNCLNQISDQYDTSELSDIVDLFY 289
>gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302]
gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302]
Length = 291
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 157/246 (63%), Gaps = 7/246 (2%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIA---SCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+ + E++ YS+ AGGKR+RP L + S ++ E + VA ALEMIHT SL+HDDL
Sbjct: 25 SSLRESILYSVHAGGKRIRPYLLLEVLDSLQVPITQEHAQ--VAAALEMIHTGSLIHDDL 82
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
P MDNDDFRRG+ TNHKV+GE AILAGDAL + +A ++ V IA L
Sbjct: 83 PAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDPYALIA--QADLPSQTKVDLIANLSL 140
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERV 198
A GS G+VAG+++D++ EGK ++L EL+ IH +KT KLL II G + +++
Sbjct: 141 ASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGKLLSFPFQAAGIIAGLDENHQKQL 200
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+ IGL FQV DD+LDVT S +E+GKT KDL ++K+TYP L+G+E A+ F L
Sbjct: 201 KTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALLGLEQAKAFCNQTLD 260
Query: 259 QATEEL 264
QA +L
Sbjct: 261 QANAKL 266
>gi|416107694|ref|ZP_11590661.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346552|ref|ZP_21154516.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348005243|gb|EGY45732.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|443541370|gb|ELT51797.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 296
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 174/287 (60%), Gaps = 10/287 (3%)
Query: 6 KRVNKALDETVQLRH----PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPV 61
+R+N L + Q H PA + EAM+Y LL GGKR+RP L A+ +++G D +
Sbjct: 13 QRINHFLAK--QFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYA 70
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A A+E IH SL+HDDLP MD+D+ RRG T H F E TAILAGDAL +LAFE +
Sbjct: 71 AAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFE-ILTDI 129
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAV 181
+S ++ + I L +A G +G+ G+ +D+ SE K +SL ELE IHL+KT LL AA+
Sbjct: 130 PHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLTAAL 189
Query: 182 VCGVIIGG--GNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
G I + +++ +YA IGL FQV DDILD+ S LGKT G DL +DK+T
Sbjct: 190 KMGFICSPHFADAALTQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTGSDLTADKST 249
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
YPKL+G+E A++ A +L +A EL A LY LA +I R+
Sbjct: 250 YPKLLGLEGAKQKALELYERALTELKNLPFNTTA-LYALAEFIVKRK 295
>gi|445420381|ref|ZP_21435499.1| polyprenyl synthetase [Acinetobacter sp. WC-743]
gi|444758968|gb|ELW83456.1| polyprenyl synthetase [Acinetobacter sp. WC-743]
Length = 309
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 161/254 (63%), Gaps = 9/254 (3%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES--SAMPVACALEMIHTMSLVHDDL 78
P + A+ ++++ GGKRVRP L A+ +L + + + A A+E IH SL HDDL
Sbjct: 39 PEPLKSAVHHTVMLGGKRVRPALSYATFQLKADNPNFAAVRRAAVAIEFIHCYSLAHDDL 98
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK----STEISPDRVVRAIA 134
PCMDND RRG+PT H FGEDTA+LAGD L S+AFE + ++ + +++ +
Sbjct: 99 PCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGQTVDQAIILKQMQ 158
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVV-CGVIIGGGNMI 193
L +A S +V G+++D+ +EGK V LENIH +KT L++AA++ V I G
Sbjct: 159 ILATA--SSKMVCGQVLDLQAEGKHVDQEHLENIHRNKTGALIQAAIMMAAVTIFSGTDQ 216
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFA 253
+ ++R+Y + IGL FQV DDILDV ++ LGKTAGKD DK+TYP LMG+ENA+ +A
Sbjct: 217 AIPQLRQYGQAIGLAFQVQDDILDVISDTESLGKTAGKDEQVDKSTYPALMGLENAQIYA 276
Query: 254 CDLLAQATEELAYF 267
L QA + LAYF
Sbjct: 277 QQLHDQAFKALAYF 290
>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
M50/1]
Length = 296
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 164/264 (62%), Gaps = 5/264 (1%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
EAM YS LAGGKR+RP+L + + L GG P A+EMIHT SLVHDDLP MDND+
Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDE 93
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDR--VVRAIAELGSAVGSE 143
+RRGK T H V+GE AILAGDALL+ AFE AAK+ +I P + +AI L + G
Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDALLTYAFE-TAAKALDIEPQNPGIGKAIRILSAKAGIY 152
Query: 144 GLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAAVVCGVIIGGGNMIEVERVRKYA 202
G+V G+ +D++SE D++ +L+ I+ KT+ L+EA+++ G ++ G E + V + A
Sbjct: 153 GMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEVA 212
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQ+ DDILDVT + + LGK G D + K+TY GIE A++ DL +A
Sbjct: 213 SKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKSTYVTYEGIEKAKQDVADLSEKAIA 272
Query: 263 ELAYFEVARAAPLYHLAYYIASRQ 286
++ V + L L Y+ SR+
Sbjct: 273 QMETL-VVKNEFLTELLRYLISRE 295
>gi|386022367|ref|YP_005940392.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 169/269 (62%), Gaps = 7/269 (2%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++++AMRYS++ GGKRVRP+L A+CE + GD++ A ACA+E+IH SLVHDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV---VRAIAELGSA 139
+DD RRG+PT HK F E AILAGD L SLAFE +A E +P +R A L A
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA--QAEHNPQDAALRLRMFAVLARA 147
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAVVCGVIIGG-GNMIEVERV 198
G G+V G+ +D+ S G + + LE +H HKT L+EA+V G + G + + +
Sbjct: 148 AGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASL 207
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+YAR IGL FQV DDILDV + LGK G D+ DK TYP L+G+ A+ +A +L
Sbjct: 208 SQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMAAAKAYALELRD 267
Query: 259 QATEELAYFEVARAAPLYHLAYYIASRQH 287
QA L F+ A A PL LA YI R++
Sbjct: 268 QALHALRPFDFA-AEPLRELARYIVERRN 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,156,035,051
Number of Sequences: 23463169
Number of extensions: 165631730
Number of successful extensions: 467152
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8201
Number of HSP's successfully gapped in prelim test: 1548
Number of HSP's that attempted gapping in prelim test: 439223
Number of HSP's gapped (non-prelim): 10311
length of query: 287
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 146
effective length of database: 9,050,888,538
effective search space: 1321429726548
effective search space used: 1321429726548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)