Query 038410
Match_columns 850
No_of_seqs 792 out of 5883
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:39:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 1.3E-47 4.4E-52 410.8 28.3 275 555-833 12-302 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 3.6E-44 1.2E-48 381.4 26.1 275 555-833 4-287 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 8.3E-43 2.8E-47 376.5 27.8 281 552-836 27-316 (318)
4 3nks_A Protoporphyrinogen oxid 100.0 4.6E-34 1.6E-38 326.7 22.7 394 1-417 3-474 (477)
5 3bus_A REBM, methyltransferase 100.0 4.1E-33 1.4E-37 293.9 24.5 265 558-834 4-273 (273)
6 3i6d_A Protoporphyrinogen oxid 100.0 3.4E-33 1.2E-37 319.0 25.8 397 1-416 6-467 (470)
7 2ivd_A PPO, PPOX, protoporphyr 100.0 3.9E-32 1.3E-36 310.7 29.4 389 1-416 17-472 (478)
8 3lov_A Protoporphyrinogen oxid 100.0 6.1E-32 2.1E-36 308.7 24.5 396 1-417 5-465 (475)
9 3ka7_A Oxidoreductase; structu 100.0 8.4E-32 2.9E-36 303.1 23.4 390 1-415 1-425 (425)
10 4gde_A UDP-galactopyranose mut 100.0 3.9E-31 1.3E-35 305.4 26.3 392 2-417 12-479 (513)
11 2b9w_A Putative aminooxidase; 100.0 1E-30 3.6E-35 294.0 28.3 385 1-414 7-423 (424)
12 2o57_A Putative sarcosine dime 100.0 4.7E-30 1.6E-34 273.9 29.2 268 554-835 14-295 (297)
13 2vvm_A Monoamine oxidase N; FA 100.0 2.1E-30 7.2E-35 297.5 28.3 395 2-416 41-484 (495)
14 1sez_A Protoporphyrinogen oxid 100.0 8.7E-31 3E-35 301.5 23.7 393 1-416 14-492 (504)
15 3nrn_A Uncharacterized protein 100.0 2.3E-30 7.8E-35 290.8 22.9 378 1-413 1-403 (421)
16 1s3e_A Amine oxidase [flavin-c 100.0 5.8E-30 2E-34 295.4 26.5 394 1-415 5-452 (520)
17 2yg5_A Putrescine oxidase; oxi 100.0 1.1E-28 3.6E-33 280.1 25.8 392 1-415 6-449 (453)
18 4dgk_A Phytoene dehydrogenase; 100.0 1.8E-29 6.2E-34 290.4 17.6 284 1-301 2-315 (501)
19 4dsg_A UDP-galactopyranose mut 100.0 2.2E-28 7.6E-33 277.9 26.0 388 1-414 10-452 (484)
20 3vc1_A Geranyl diphosphate 2-C 100.0 1.2E-27 4E-32 256.8 21.4 252 553-833 56-311 (312)
21 2bi7_A UDP-galactopyranose mut 99.9 2.9E-27 9.9E-32 260.4 16.2 351 1-416 4-369 (384)
22 1i8t_A UDP-galactopyranose mut 99.9 1.8E-27 6E-32 260.7 13.6 358 1-416 2-366 (367)
23 3k7m_X 6-hydroxy-L-nicotine ox 99.9 8.3E-27 2.8E-31 262.8 19.3 386 1-416 2-425 (431)
24 1v0j_A UDP-galactopyranose mut 99.9 5.8E-28 2E-32 267.9 7.9 361 1-415 8-385 (399)
25 1rsg_A FMS1 protein; FAD bindi 99.9 1.1E-26 3.7E-31 267.5 17.5 276 1-307 9-309 (516)
26 1b37_A Protein (polyamine oxid 99.9 3.2E-26 1.1E-30 260.7 18.8 390 1-416 5-457 (472)
27 2jae_A L-amino acid oxidase; o 99.9 1.7E-26 5.7E-31 264.6 13.4 286 1-306 12-334 (489)
28 3ujc_A Phosphoethanolamine N-m 99.9 4.9E-25 1.7E-29 231.1 22.1 220 601-834 41-266 (266)
29 2iid_A L-amino-acid oxidase; f 99.9 1.7E-24 5.8E-29 248.6 27.3 392 1-416 34-483 (498)
30 4gut_A Lysine-specific histone 99.9 2.9E-24 9.8E-29 254.2 22.6 382 1-415 337-775 (776)
31 3bkx_A SAM-dependent methyltra 99.9 6.9E-25 2.4E-29 231.1 13.6 229 593-832 21-274 (275)
32 3kkz_A Uncharacterized protein 99.9 5.1E-24 1.7E-28 223.3 16.5 209 604-821 34-253 (267)
33 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 7.2E-24 2.4E-28 230.8 17.9 205 202-415 102-340 (342)
34 2xag_A Lysine-specific histone 99.9 2.5E-23 8.5E-28 247.5 23.7 209 202-416 562-828 (852)
35 2z3y_A Lysine-specific histone 99.9 2.9E-23 9.8E-28 244.7 23.1 209 202-416 391-657 (662)
36 1dl5_A Protein-L-isoaspartate 99.9 9.4E-27 3.2E-31 249.7 -9.8 237 575-834 28-281 (317)
37 3ayj_A Pro-enzyme of L-phenyla 99.9 6.3E-22 2.1E-26 228.6 19.1 295 1-307 57-496 (721)
38 2bcg_G Secretory pathway GDP d 99.9 3.8E-20 1.3E-24 208.7 33.4 255 1-267 12-299 (453)
39 3hdq_A UDP-galactopyranose mut 99.9 9.7E-22 3.3E-26 214.5 17.2 346 2-417 31-391 (397)
40 4htf_A S-adenosylmethionine-de 99.9 3.2E-22 1.1E-26 211.8 12.6 218 602-838 56-283 (285)
41 3dli_A Methyltransferase; PSI- 99.9 2.2E-22 7.7E-27 207.2 8.6 170 613-802 39-223 (240)
42 1yvv_A Amine oxidase, flavin-c 99.9 7.1E-21 2.4E-25 206.7 20.0 300 1-417 3-327 (336)
43 3f4k_A Putative methyltransfer 99.8 9.6E-20 3.3E-24 189.6 21.8 213 604-833 34-256 (257)
44 1nkv_A Hypothetical protein YJ 99.8 2.4E-19 8.1E-24 186.5 23.8 164 602-773 23-187 (256)
45 1vl5_A Unknown conserved prote 99.8 1.7E-19 6E-24 187.9 16.0 185 596-789 18-204 (260)
46 1d5t_A Guanine nucleotide diss 99.8 5.7E-19 2E-23 197.7 21.0 255 1-268 7-290 (433)
47 3p1w_A Rabgdi protein; GDI RAB 99.8 5.1E-19 1.7E-23 196.6 19.1 253 2-267 22-313 (475)
48 3mgg_A Methyltransferase; NYSG 99.8 8.2E-19 2.8E-23 184.6 18.0 189 583-775 5-200 (276)
49 4gek_A TRNA (CMO5U34)-methyltr 99.8 7.4E-19 2.5E-23 181.7 17.2 112 613-725 68-182 (261)
50 1pjz_A Thiopurine S-methyltran 99.8 8.7E-19 3E-23 174.9 16.2 154 604-774 11-177 (203)
51 3iv6_A Putative Zn-dependent a 99.8 2.1E-19 7.3E-24 183.9 11.9 154 603-764 33-212 (261)
52 3ou2_A SAM-dependent methyltra 99.8 1.6E-18 5.3E-23 175.5 17.5 166 605-777 35-209 (218)
53 2e1m_A L-glutamate oxidase; L- 99.8 9.3E-19 3.2E-23 189.3 15.1 248 1-265 45-370 (376)
54 1xxl_A YCGJ protein; structura 99.8 2.3E-18 8E-23 176.8 16.4 180 601-789 7-188 (239)
55 1ri5_A MRNA capping enzyme; me 99.8 8.4E-19 2.9E-23 186.8 13.4 216 554-781 14-258 (298)
56 3dtn_A Putative methyltransfer 99.8 3.6E-18 1.2E-22 174.9 15.2 164 605-772 33-213 (234)
57 3h2b_A SAM-dependent methyltra 99.8 4.3E-18 1.5E-22 170.2 15.4 141 616-774 42-183 (203)
58 3hnr_A Probable methyltransfer 99.8 2.8E-18 9.4E-23 174.0 13.9 162 605-775 35-203 (220)
59 3dh0_A SAM dependent methyltra 99.8 1.3E-17 4.4E-22 168.9 18.8 154 605-775 27-183 (219)
60 3lcc_A Putative methyl chlorid 99.8 7.8E-18 2.7E-22 172.5 17.0 153 605-775 57-209 (235)
61 3p2e_A 16S rRNA methylase; met 99.8 1.1E-19 3.8E-24 183.9 1.9 174 613-806 22-211 (225)
62 3fpf_A Mtnas, putative unchara 99.7 3.5E-18 1.2E-22 175.9 11.7 165 550-721 56-222 (298)
63 3ocj_A Putative exported prote 99.7 4.8E-18 1.6E-22 181.3 13.3 167 610-777 113-295 (305)
64 3dlc_A Putative S-adenosyl-L-m 99.7 2.2E-18 7.7E-23 174.4 9.1 166 602-772 31-202 (219)
65 3jwg_A HEN1, methyltransferase 99.7 2.9E-17 1E-21 166.3 17.1 121 601-721 15-141 (219)
66 3g2m_A PCZA361.24; SAM-depende 99.7 6.1E-18 2.1E-22 180.0 12.5 170 602-774 70-275 (299)
67 3jwh_A HEN1; methyltransferase 99.7 2.2E-17 7.5E-22 166.9 15.6 121 602-722 16-142 (217)
68 4fsd_A Arsenic methyltransfera 99.7 9.2E-18 3.1E-22 184.6 13.4 184 583-772 41-250 (383)
69 2yqz_A Hypothetical protein TT 99.7 4.5E-18 1.5E-22 177.6 10.2 171 612-789 36-212 (263)
70 3e23_A Uncharacterized protein 99.7 2.4E-17 8.3E-22 165.8 14.9 148 604-773 34-182 (211)
71 1xtp_A LMAJ004091AAA; SGPP, st 99.7 4E-17 1.4E-21 169.4 16.8 164 596-773 74-238 (254)
72 2ex4_A Adrenal gland protein A 99.7 5.9E-18 2E-22 174.1 9.9 147 614-773 78-225 (241)
73 2p7i_A Hypothetical protein; p 99.7 1.3E-17 4.6E-22 172.4 12.6 160 605-773 31-199 (250)
74 2gb4_A Thiopurine S-methyltran 99.7 6.3E-17 2.1E-21 166.3 17.3 146 612-774 65-228 (252)
75 2xvm_A Tellurite resistance pr 99.7 1.6E-16 5.5E-21 158.1 19.7 151 606-773 23-173 (199)
76 2p35_A Trans-aconitate 2-methy 99.7 1E-16 3.4E-21 166.9 18.5 162 601-771 19-188 (259)
77 3g5l_A Putative S-adenosylmeth 99.7 1.3E-16 4.3E-21 165.5 18.3 165 604-776 33-219 (253)
78 3ccf_A Cyclopropane-fatty-acyl 99.7 8.6E-17 3E-21 169.3 17.2 172 605-788 47-230 (279)
79 2r3s_A Uncharacterized protein 99.7 6.8E-17 2.3E-21 175.1 16.7 171 603-775 151-325 (335)
80 3l8d_A Methyltransferase; stru 99.7 2.4E-16 8.3E-21 162.2 19.0 154 605-773 45-200 (242)
81 2y1w_A Histone-arginine methyl 99.7 1E-17 3.6E-22 181.4 8.0 178 604-786 39-224 (348)
82 3i53_A O-methyltransferase; CO 99.7 2.9E-16 1E-20 169.6 18.1 165 604-775 158-323 (332)
83 2g72_A Phenylethanolamine N-me 99.7 5.4E-17 1.8E-21 171.8 12.0 198 557-774 17-257 (289)
84 3pfg_A N-methyltransferase; N, 99.7 1.6E-16 5.4E-21 165.8 15.3 116 602-726 39-156 (263)
85 3ege_A Putative methyltransfer 99.7 3.6E-17 1.2E-21 170.3 10.2 152 602-773 21-178 (261)
86 3gwz_A MMCR; methyltransferase 99.7 5.8E-16 2E-20 169.4 20.3 166 602-772 189-355 (369)
87 4e2x_A TCAB9; kijanose, tetron 99.7 1.6E-17 5.4E-22 185.5 7.9 173 588-774 80-254 (416)
88 3e8s_A Putative SAM dependent 99.7 5.9E-17 2E-21 164.9 11.5 155 604-772 41-208 (227)
89 3m70_A Tellurite resistance pr 99.7 4.8E-16 1.6E-20 164.3 18.8 148 607-772 112-259 (286)
90 2a14_A Indolethylamine N-methy 99.7 8.7E-17 3E-21 167.4 12.1 151 612-774 52-239 (263)
91 1zx0_A Guanidinoacetate N-meth 99.7 1.9E-17 6.6E-22 169.6 6.6 160 561-723 4-172 (236)
92 3gu3_A Methyltransferase; alph 99.7 1.1E-16 3.7E-21 168.9 12.4 116 604-723 10-128 (284)
93 1ve3_A Hypothetical protein PH 99.7 7.1E-16 2.4E-20 156.9 17.8 123 596-723 21-144 (227)
94 3mcz_A O-methyltransferase; ad 99.7 2.5E-16 8.6E-21 171.7 15.1 165 604-770 167-336 (352)
95 3i9f_A Putative type 11 methyl 99.7 1.9E-16 6.3E-21 153.4 12.5 143 605-775 7-150 (170)
96 3b3j_A Histone-arginine methyl 99.7 1.9E-17 6.6E-22 185.6 5.9 189 603-794 146-340 (480)
97 3bgv_A MRNA CAP guanine-N7 met 99.7 3E-16 1E-20 168.0 15.0 171 614-785 33-244 (313)
98 1y8c_A S-adenosylmethionine-de 99.7 4E-16 1.4E-20 160.9 15.4 107 614-723 36-144 (246)
99 3mq2_A 16S rRNA methyltransfer 99.7 1.3E-17 4.6E-22 168.6 4.2 180 606-798 18-210 (218)
100 1qzz_A RDMB, aclacinomycin-10- 99.7 4.4E-16 1.5E-20 171.3 16.5 167 605-775 172-341 (374)
101 3sm3_A SAM-dependent methyltra 99.7 2.7E-16 9.2E-21 160.9 13.8 158 613-773 28-207 (235)
102 3g5t_A Trans-aconitate 3-methy 99.7 8.1E-16 2.8E-20 163.6 17.8 115 605-723 27-151 (299)
103 2p8j_A S-adenosylmethionine-de 99.7 5.7E-16 2E-20 155.4 15.8 155 613-770 21-180 (209)
104 2kw5_A SLR1183 protein; struct 99.7 1.2E-15 4.3E-20 152.1 17.0 149 606-774 23-172 (202)
105 3ofk_A Nodulation protein S; N 99.7 3.9E-16 1.3E-20 157.6 13.4 115 605-723 41-156 (216)
106 3bkw_A MLL3908 protein, S-aden 99.7 6.9E-16 2.4E-20 158.8 15.5 163 606-776 34-217 (243)
107 3dp7_A SAM-dependent methyltra 99.7 5E-16 1.7E-20 169.6 15.1 157 614-772 178-341 (363)
108 3grz_A L11 mtase, ribosomal pr 99.7 1E-15 3.5E-20 153.1 16.0 161 572-775 27-187 (205)
109 3cc8_A Putative methyltransfer 99.7 5.9E-16 2E-20 157.8 14.5 175 606-794 24-205 (230)
110 1x19_A CRTF-related protein; m 99.7 2.2E-15 7.5E-20 164.5 19.1 165 603-774 178-349 (359)
111 3bxo_A N,N-dimethyltransferase 99.6 1.9E-15 6.7E-20 155.0 17.1 106 614-726 39-146 (239)
112 1tw3_A COMT, carminomycin 4-O- 99.6 1.1E-15 3.7E-20 167.2 15.9 166 605-774 173-340 (360)
113 4hg2_A Methyltransferase type 99.6 1.7E-16 5.7E-21 163.4 8.7 109 604-725 30-139 (257)
114 3mti_A RRNA methylase; SAM-dep 99.6 1.6E-15 5.3E-20 149.1 15.3 110 612-723 19-137 (185)
115 2ip2_A Probable phenazine-spec 99.6 8.4E-16 2.9E-20 166.2 14.5 167 603-774 156-323 (334)
116 3dxy_A TRNA (guanine-N(7)-)-me 99.6 5.7E-16 2E-20 155.8 11.6 106 615-721 34-150 (218)
117 3njr_A Precorrin-6Y methylase; 99.6 2.7E-15 9.2E-20 149.5 16.2 111 605-723 45-156 (204)
118 3d2l_A SAM-dependent methyltra 99.6 7.6E-15 2.6E-19 151.0 19.9 114 603-722 23-138 (243)
119 2i62_A Nicotinamide N-methyltr 99.6 8.6E-16 2.9E-20 160.4 12.5 154 612-777 53-243 (265)
120 3lst_A CALO1 methyltransferase 99.6 1.2E-15 4.1E-20 165.7 14.0 163 604-773 173-336 (348)
121 2aot_A HMT, histamine N-methyl 99.6 2.7E-16 9.2E-21 166.6 8.7 147 613-770 50-218 (292)
122 2vdw_A Vaccinia virus capping 99.6 1.9E-15 6.5E-20 159.7 14.6 159 614-774 47-247 (302)
123 3cgg_A SAM-dependent methyltra 99.6 4.9E-15 1.7E-19 146.6 16.5 135 606-772 38-174 (195)
124 1wzn_A SAM-dependent methyltra 99.6 5E-15 1.7E-19 153.3 16.8 120 601-723 27-147 (252)
125 3thr_A Glycine N-methyltransfe 99.6 3.1E-15 1.1E-19 158.7 15.4 118 605-723 47-177 (293)
126 3nyc_A D-arginine dehydrogenas 99.6 2.7E-15 9.2E-20 165.5 15.4 205 212-432 154-379 (381)
127 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.3E-15 7.8E-20 146.8 13.2 116 601-723 11-129 (178)
128 3e05_A Precorrin-6Y C5,15-meth 99.6 7.3E-15 2.5E-19 146.7 16.3 115 603-723 28-144 (204)
129 3lbf_A Protein-L-isoaspartate 99.6 3.2E-15 1.1E-19 150.1 13.2 112 602-723 64-176 (210)
130 3evz_A Methyltransferase; NYSG 99.6 7.7E-15 2.6E-19 149.6 16.0 111 609-721 49-179 (230)
131 3orh_A Guanidinoacetate N-meth 99.6 8E-16 2.7E-20 157.1 7.8 104 613-720 58-169 (236)
132 3fzg_A 16S rRNA methylase; met 99.6 1.4E-15 5E-20 143.9 8.9 104 614-721 48-152 (200)
133 3g07_A 7SK snRNA methylphospha 99.6 1.5E-15 5.2E-20 160.5 10.1 153 615-772 46-268 (292)
134 1dus_A MJ0882; hypothetical pr 99.6 1.3E-14 4.6E-19 143.3 16.2 118 604-723 41-159 (194)
135 3uwp_A Histone-lysine N-methyl 99.6 4.1E-15 1.4E-19 158.2 13.0 125 600-727 158-294 (438)
136 3p9n_A Possible methyltransfer 99.6 1.2E-14 4.2E-19 143.1 15.3 109 614-724 43-156 (189)
137 2gs9_A Hypothetical protein TT 99.6 5.9E-15 2E-19 148.3 12.9 142 605-760 27-170 (211)
138 2avn_A Ubiquinone/menaquinone 99.6 1E-14 3.4E-19 151.7 15.1 141 552-723 13-154 (260)
139 3eey_A Putative rRNA methylase 99.6 6.5E-15 2.2E-19 146.2 12.8 117 607-723 14-141 (197)
140 3ggd_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 153.5 11.4 151 613-773 54-219 (245)
141 4df3_A Fibrillarin-like rRNA/T 99.6 4.4E-15 1.5E-19 148.4 11.4 143 609-775 71-219 (233)
142 1yub_A Ermam, rRNA methyltrans 99.6 2.4E-17 8.2E-22 169.6 -5.4 188 603-817 17-244 (245)
143 1vlm_A SAM-dependent methyltra 99.6 6.1E-15 2.1E-19 149.1 12.4 140 616-773 48-188 (219)
144 4a6d_A Hydroxyindole O-methylt 99.6 1.8E-14 6E-19 156.3 15.9 167 604-775 168-336 (353)
145 3htx_A HEN1; HEN1, small RNA m 99.6 1.5E-14 5.1E-19 164.7 15.3 120 602-723 708-836 (950)
146 2nxc_A L11 mtase, ribosomal pr 99.6 1.2E-14 4E-19 150.2 13.3 157 575-775 90-246 (254)
147 3reo_A (ISO)eugenol O-methyltr 99.6 1.9E-14 6.5E-19 157.1 14.9 160 603-774 190-356 (368)
148 3ps9_A TRNA 5-methylaminomethy 99.6 3.8E-15 1.3E-19 176.5 9.9 57 212-268 417-473 (676)
149 1xdz_A Methyltransferase GIDB; 99.6 1.8E-14 6.2E-19 147.7 13.7 102 612-720 67-173 (240)
150 2qe6_A Uncharacterized protein 99.6 3.2E-14 1.1E-18 148.3 15.7 165 596-769 57-238 (274)
151 3pvc_A TRNA 5-methylaminomethy 99.6 1.9E-15 6.5E-20 179.3 7.2 57 212-268 412-469 (689)
152 2esr_A Methyltransferase; stru 99.6 1.1E-14 3.6E-19 142.0 11.2 119 603-724 18-141 (177)
153 3p9c_A Caffeic acid O-methyltr 99.6 2.7E-14 9.1E-19 155.6 15.0 160 603-774 188-354 (364)
154 4dcm_A Ribosomal RNA large sub 99.5 4.4E-14 1.5E-18 153.6 16.1 133 583-721 196-334 (375)
155 3dje_A Fructosyl amine: oxygen 99.5 1.3E-14 4.3E-19 163.4 12.1 57 212-268 161-221 (438)
156 3dr5_A Putative O-methyltransf 99.5 2.2E-14 7.7E-19 144.4 12.5 121 599-724 40-166 (221)
157 3lpm_A Putative methyltransfer 99.5 6.4E-14 2.2E-18 145.4 16.2 115 606-720 39-175 (259)
158 3ntv_A MW1564 protein; rossman 99.5 1.6E-14 5.6E-19 147.1 10.9 109 611-724 67-179 (232)
159 2h00_A Methyltransferase 10 do 99.5 1.9E-15 6.6E-20 156.6 3.9 197 570-773 19-238 (254)
160 2pxx_A Uncharacterized protein 99.5 3.4E-14 1.1E-18 143.1 12.9 108 613-724 40-162 (215)
161 2yxe_A Protein-L-isoaspartate 99.5 3E-14 1E-18 143.6 12.1 140 602-751 64-207 (215)
162 1ryi_A Glycine oxidase; flavop 99.5 2.4E-14 8.1E-19 158.0 12.3 187 212-417 164-363 (382)
163 2fca_A TRNA (guanine-N(7)-)-me 99.5 3.5E-14 1.2E-18 142.5 12.4 107 614-721 37-153 (213)
164 2ift_A Putative methylase HI07 99.5 1.8E-14 6.3E-19 143.2 10.2 107 615-724 53-166 (201)
165 1fp1_D Isoliquiritigenin 2'-O- 99.5 3.2E-14 1.1E-18 155.9 12.8 158 603-772 196-359 (372)
166 2fhp_A Methylase, putative; al 99.5 3.2E-14 1.1E-18 139.8 11.6 118 604-724 32-157 (187)
167 3dmg_A Probable ribosomal RNA 99.5 8.5E-14 2.9E-18 151.4 15.9 132 585-721 203-340 (381)
168 3kr9_A SAM-dependent methyltra 99.5 1.5E-13 5E-18 136.6 16.2 106 613-722 13-120 (225)
169 3r0q_C Probable protein argini 99.5 3.4E-14 1.2E-18 155.2 12.9 116 605-722 53-170 (376)
170 3lec_A NADB-rossmann superfami 99.5 1E-13 3.5E-18 137.9 15.1 106 613-722 19-126 (230)
171 1vg0_A RAB proteins geranylger 99.5 4.2E-13 1.4E-17 153.2 22.0 113 144-263 313-432 (650)
172 2uzz_A N-methyl-L-tryptophan o 99.5 1.4E-14 4.8E-19 159.2 9.7 56 212-268 149-204 (372)
173 2frn_A Hypothetical protein PH 99.5 7.5E-14 2.6E-18 146.1 14.6 130 613-769 123-253 (278)
174 1vbf_A 231AA long hypothetical 99.5 3.6E-14 1.2E-18 144.7 11.8 111 602-724 57-168 (231)
175 2fyt_A Protein arginine N-meth 99.5 6.1E-14 2.1E-18 151.0 14.2 112 605-719 54-169 (340)
176 3u81_A Catechol O-methyltransf 99.5 2.1E-14 7.1E-19 145.3 9.9 109 613-724 56-173 (221)
177 3q7e_A Protein arginine N-meth 99.5 3.1E-14 1.1E-18 154.0 11.9 114 607-721 58-173 (349)
178 1l3i_A Precorrin-6Y methyltran 99.5 6.5E-14 2.2E-18 138.1 13.1 114 603-722 21-135 (192)
179 1u2z_A Histone-lysine N-methyl 99.5 6.5E-14 2.2E-18 153.1 14.1 122 601-725 228-363 (433)
180 3gdh_A Trimethylguanosine synt 99.5 1.2E-15 4.1E-20 156.8 0.4 104 614-720 77-180 (241)
181 1yzh_A TRNA (guanine-N(7)-)-me 99.5 9.1E-14 3.1E-18 139.8 14.1 107 614-721 40-156 (214)
182 3kkj_A Amine oxidase, flavin-c 99.5 8.5E-13 2.9E-17 138.6 22.1 56 2-57 4-59 (336)
183 3g89_A Ribosomal RNA small sub 99.5 5.2E-14 1.8E-18 144.4 11.9 102 613-721 78-184 (249)
184 2yxd_A Probable cobalt-precorr 99.5 1.7E-13 5.7E-18 134.0 14.6 111 602-722 22-132 (183)
185 1y56_B Sarcosine oxidase; dehy 99.5 3.8E-14 1.3E-18 156.4 10.6 202 212-431 149-368 (382)
186 3gnl_A Uncharacterized protein 99.5 2.3E-13 8E-18 136.4 14.6 106 613-722 19-126 (244)
187 1jsx_A Glucose-inhibited divis 99.5 9.4E-14 3.2E-18 139.0 11.7 99 615-720 65-164 (207)
188 3m33_A Uncharacterized protein 99.5 8.2E-14 2.8E-18 141.4 11.4 119 613-773 46-167 (226)
189 1g6q_1 HnRNP arginine N-methyl 99.5 1.2E-13 4.1E-18 148.2 13.2 114 606-720 29-144 (328)
190 4azs_A Methyltransferase WBDD; 99.5 7.5E-14 2.6E-18 161.1 12.2 119 604-726 57-178 (569)
191 2ozv_A Hypothetical protein AT 99.5 8.9E-14 3E-18 144.1 11.5 116 606-721 27-170 (260)
192 3id6_C Fibrillarin-like rRNA/T 99.5 6.3E-13 2.2E-17 133.3 17.3 141 611-775 72-218 (232)
193 1o9g_A RRNA methyltransferase; 99.5 9.2E-14 3.2E-18 143.4 11.5 120 602-721 38-214 (250)
194 1nt2_A Fibrillarin-like PRE-rR 99.5 2.1E-13 7.1E-18 136.2 13.6 104 611-721 53-161 (210)
195 3bzb_A Uncharacterized protein 99.5 5E-13 1.7E-17 140.1 17.1 116 602-720 66-204 (281)
196 3mb5_A SAM-dependent methyltra 99.5 1.7E-13 5.7E-18 142.0 13.4 112 604-722 82-195 (255)
197 2b3t_A Protein methyltransfera 99.5 2.6E-13 8.8E-18 142.2 14.9 117 602-720 97-237 (276)
198 1yb2_A Hypothetical protein TA 99.5 1.4E-13 4.6E-18 144.2 12.6 134 605-772 100-236 (275)
199 2gag_B Heterotetrameric sarcos 99.5 1.7E-13 5.7E-18 152.5 14.1 199 212-431 174-388 (405)
200 1fbn_A MJ fibrillarin homologu 99.5 1.1E-13 3.9E-18 140.7 11.6 108 605-720 61-177 (230)
201 3tfw_A Putative O-methyltransf 99.5 1.2E-13 4.2E-18 142.1 11.8 108 613-725 61-174 (248)
202 3duw_A OMT, O-methyltransferas 99.5 6.3E-14 2.2E-18 142.0 9.4 108 613-725 56-171 (223)
203 2fpo_A Methylase YHHF; structu 99.5 1.2E-13 4.3E-18 137.3 11.1 106 615-724 54-163 (202)
204 3dme_A Conserved exported prot 99.5 2.6E-13 8.7E-18 148.8 14.6 57 212-268 150-209 (369)
205 1jg1_A PIMT;, protein-L-isoasp 99.5 1.3E-13 4.5E-18 140.8 11.3 113 602-723 78-191 (235)
206 2gpy_A O-methyltransferase; st 99.5 1.2E-13 3.9E-18 141.1 10.7 113 606-723 45-162 (233)
207 2oln_A NIKD protein; flavoprot 99.5 4.8E-13 1.6E-17 148.4 16.5 56 212-268 153-208 (397)
208 2gf3_A MSOX, monomeric sarcosi 99.5 7.2E-14 2.4E-18 154.6 9.6 203 212-432 150-378 (389)
209 3q87_B N6 adenine specific DNA 99.5 2.6E-13 8.9E-18 130.9 12.3 120 614-772 22-148 (170)
210 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.8E-13 6.2E-18 139.1 11.7 108 613-721 44-168 (235)
211 2pjd_A Ribosomal RNA small sub 99.5 2E-13 6.8E-18 147.6 12.7 128 586-722 173-304 (343)
212 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5E-13 1.7E-17 138.7 15.1 134 605-772 86-223 (258)
213 1ws6_A Methyltransferase; stru 99.5 8.9E-14 3E-18 134.4 8.5 105 614-725 40-151 (171)
214 3tr6_A O-methyltransferase; ce 99.5 1E-13 3.5E-18 140.6 9.2 107 614-725 63-178 (225)
215 3r3h_A O-methyltransferase, SA 99.4 3.5E-14 1.2E-18 145.2 5.5 118 601-726 49-175 (242)
216 1fp2_A Isoflavone O-methyltran 99.4 2.1E-13 7.1E-18 148.3 11.9 149 612-773 185-341 (352)
217 1ixk_A Methyltransferase; open 99.4 3.6E-13 1.2E-17 143.4 13.4 118 606-724 109-249 (315)
218 1nv8_A HEMK protein; class I a 99.4 2.9E-13 1E-17 141.7 12.2 117 603-720 111-248 (284)
219 4hc4_A Protein arginine N-meth 99.4 2.2E-13 7.6E-18 146.4 11.3 107 613-721 81-189 (376)
220 3giw_A Protein of unknown func 99.4 3.8E-13 1.3E-17 136.8 11.9 169 595-769 57-243 (277)
221 1i1n_A Protein-L-isoaspartate 99.4 8.7E-13 3E-17 133.9 14.3 111 605-723 65-184 (226)
222 3k6r_A Putative transferase PH 99.4 6E-13 2E-17 137.1 12.9 106 613-724 123-228 (278)
223 3ajd_A Putative methyltransfer 99.4 7.3E-13 2.5E-17 138.3 13.6 119 606-725 74-215 (274)
224 2igt_A SAM dependent methyltra 99.4 4.5E-13 1.6E-17 143.1 12.1 108 613-723 151-274 (332)
225 4dzr_A Protein-(glutamine-N5) 99.4 5.4E-14 1.9E-18 141.5 4.6 119 601-721 15-164 (215)
226 1o54_A SAM-dependent O-methylt 99.4 9.9E-13 3.4E-17 137.9 14.0 111 605-722 102-214 (277)
227 3c3p_A Methyltransferase; NP_9 99.4 2.9E-13 9.9E-18 135.7 9.5 105 614-724 55-163 (210)
228 1sui_A Caffeoyl-COA O-methyltr 99.4 2.4E-13 8.1E-18 139.5 8.9 116 601-724 68-193 (247)
229 2ipx_A RRNA 2'-O-methyltransfe 99.4 6.6E-13 2.3E-17 135.4 12.0 108 608-722 70-183 (233)
230 2zfu_A Nucleomethylin, cerebra 99.4 5.5E-13 1.9E-17 134.2 11.1 115 613-774 65-180 (215)
231 2yvl_A TRMI protein, hypotheti 99.4 1.7E-12 5.8E-17 133.8 14.9 110 605-722 81-191 (248)
232 1i9g_A Hypothetical protein RV 99.4 1E-12 3.5E-17 138.1 13.1 113 604-723 88-205 (280)
233 2hnk_A SAM-dependent O-methylt 99.4 3.1E-13 1.1E-17 138.4 8.9 108 612-724 57-184 (239)
234 1r18_A Protein-L-isoaspartate( 99.4 3.9E-13 1.3E-17 136.5 9.4 111 604-722 71-195 (227)
235 1af7_A Chemotaxis receptor met 99.4 6E-12 2.1E-16 129.9 18.3 105 615-719 105-250 (274)
236 3hp7_A Hemolysin, putative; st 99.4 2.3E-13 7.9E-18 140.6 7.7 152 602-772 71-231 (291)
237 2pbf_A Protein-L-isoaspartate 99.4 7.1E-13 2.4E-17 134.6 11.2 111 605-723 68-195 (227)
238 1zg3_A Isoflavanone 4'-O-methy 99.4 6.1E-13 2.1E-17 145.0 10.8 156 606-773 182-347 (358)
239 1g8a_A Fibrillarin-like PRE-rR 99.4 1.5E-12 5.3E-17 132.1 12.5 106 608-720 66-177 (227)
240 3c3y_A Pfomt, O-methyltransfer 99.4 7.3E-13 2.5E-17 135.2 9.8 116 601-724 59-184 (237)
241 3tma_A Methyltransferase; thum 99.4 2.3E-12 8E-17 140.0 14.2 118 604-722 192-318 (354)
242 3a27_A TYW2, uncharacterized p 99.4 1.3E-12 4.6E-17 136.0 11.7 106 612-724 116-222 (272)
243 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2.3E-12 7.9E-17 132.4 12.8 107 613-720 47-172 (246)
244 3cbg_A O-methyltransferase; cy 99.4 7.3E-13 2.5E-17 134.8 8.6 107 614-725 71-186 (232)
245 3axb_A Putative oxidoreductase 99.4 2.9E-13 9.9E-18 152.7 5.5 56 212-268 181-254 (448)
246 2avd_A Catechol-O-methyltransf 99.4 1.2E-12 4.1E-17 133.1 9.2 107 613-724 67-182 (229)
247 2plw_A Ribosomal RNA methyltra 99.3 3.8E-12 1.3E-16 126.5 12.3 108 603-722 9-155 (201)
248 2bm8_A Cephalosporin hydroxyla 99.3 6.9E-13 2.4E-17 135.0 7.0 97 615-722 81-188 (236)
249 2b25_A Hypothetical protein; s 99.3 4.2E-12 1.4E-16 137.0 13.2 113 604-723 94-221 (336)
250 3bwc_A Spermidine synthase; SA 99.3 2.1E-12 7E-17 136.7 9.9 109 613-721 93-210 (304)
251 1p91_A Ribosomal RNA large sub 99.3 3.6E-12 1.2E-16 133.1 11.6 96 614-724 84-181 (269)
252 3adn_A Spermidine synthase; am 99.3 2.7E-12 9.1E-17 134.5 9.6 109 614-722 82-199 (294)
253 1wy7_A Hypothetical protein PH 99.3 2.6E-11 8.9E-16 121.0 16.5 104 609-718 43-146 (207)
254 1zq9_A Probable dimethyladenos 99.3 5.9E-12 2E-16 131.9 12.2 115 601-718 14-144 (285)
255 3sso_A Methyltransferase; macr 99.3 1.9E-12 6.6E-17 137.5 8.3 107 603-723 205-326 (419)
256 2ld4_A Anamorsin; methyltransf 99.3 2.5E-12 8.7E-17 124.8 8.6 159 609-835 6-169 (176)
257 2yxl_A PH0851 protein, 450AA l 99.3 1.5E-11 5.2E-16 137.5 16.0 119 606-725 250-393 (450)
258 3opn_A Putative hemolysin; str 99.3 2.2E-13 7.6E-18 137.8 0.8 152 602-773 23-184 (232)
259 3tm4_A TRNA (guanine N2-)-meth 99.3 1.9E-11 6.5E-16 133.3 15.6 153 560-719 162-327 (373)
260 1ej0_A FTSJ; methyltransferase 99.3 5E-12 1.7E-16 122.8 9.9 109 603-723 9-138 (180)
261 3lcv_B Sisomicin-gentamicin re 99.3 3.8E-12 1.3E-16 126.2 8.7 105 614-721 131-236 (281)
262 3m6w_A RRNA methylase; rRNA me 99.3 7.7E-12 2.6E-16 138.1 12.0 118 606-725 92-233 (464)
263 3dou_A Ribosomal RNA large sub 99.3 7.3E-12 2.5E-16 122.9 10.3 109 602-723 11-141 (191)
264 3m4x_A NOL1/NOP2/SUN family pr 99.3 8.8E-12 3E-16 137.5 11.9 120 606-726 96-239 (456)
265 3v76_A Flavoprotein; structura 99.3 8.1E-12 2.8E-16 138.2 11.3 62 206-268 126-187 (417)
266 3gjy_A Spermidine synthase; AP 99.3 8.8E-12 3E-16 130.2 10.9 106 617-723 91-202 (317)
267 2b78_A Hypothetical protein SM 99.3 9.3E-12 3.2E-16 136.2 11.2 109 614-723 211-333 (385)
268 1pj5_A N,N-dimethylglycine oxi 99.3 4.9E-11 1.7E-15 144.5 18.6 56 212-268 151-207 (830)
269 1xj5_A Spermidine synthase 1; 99.3 1.2E-11 4.1E-16 131.8 11.6 109 613-721 118-235 (334)
270 2frx_A Hypothetical protein YE 99.3 1.9E-11 6.3E-16 136.7 13.3 119 606-725 106-250 (479)
271 2o07_A Spermidine synthase; st 99.3 1.1E-11 3.9E-16 130.6 10.9 111 613-723 93-211 (304)
272 1ne2_A Hypothetical protein TA 99.3 2.1E-11 7.2E-16 121.0 12.2 91 612-711 48-139 (200)
273 2wa2_A Non-structural protein 99.3 1.2E-12 4E-17 135.8 3.1 117 602-723 69-195 (276)
274 2oxt_A Nucleoside-2'-O-methylt 99.3 1.3E-12 4.4E-17 134.8 3.0 117 602-723 61-187 (265)
275 2qm3_A Predicted methyltransfe 99.3 6.4E-11 2.2E-15 129.3 16.5 105 612-721 169-277 (373)
276 1sqg_A SUN protein, FMU protei 99.2 3.2E-11 1.1E-15 134.2 14.0 119 605-725 236-378 (429)
277 1uir_A Polyamine aminopropyltr 99.2 1.7E-11 5.8E-16 130.2 11.1 110 614-723 76-197 (314)
278 2pt6_A Spermidine synthase; tr 99.2 8.2E-12 2.8E-16 132.8 8.1 108 614-722 115-231 (321)
279 2b2c_A Spermidine synthase; be 99.2 6.1E-12 2.1E-16 133.0 6.9 107 614-721 107-222 (314)
280 4dmg_A Putative uncharacterize 99.2 2.5E-11 8.5E-16 132.3 11.9 109 613-724 212-329 (393)
281 3frh_A 16S rRNA methylase; met 99.2 3.8E-11 1.3E-15 118.1 11.9 101 614-719 104-204 (253)
282 2i7c_A Spermidine synthase; tr 99.2 2.1E-11 7.2E-16 127.6 10.8 110 613-722 76-193 (283)
283 2as0_A Hypothetical protein PH 99.2 2.4E-11 8.1E-16 134.0 11.5 109 614-723 216-337 (396)
284 1mjf_A Spermidine synthase; sp 99.2 9.9E-12 3.4E-16 130.0 7.4 108 614-722 74-194 (281)
285 3c0k_A UPF0064 protein YCCW; P 99.2 3.3E-11 1.1E-15 132.8 11.9 110 614-723 219-341 (396)
286 1inl_A Spermidine synthase; be 99.2 2.6E-11 9E-16 127.6 10.2 108 614-721 89-205 (296)
287 2yx1_A Hypothetical protein MJ 99.2 4.9E-11 1.7E-15 128.1 11.7 101 614-724 194-294 (336)
288 1iy9_A Spermidine synthase; ro 99.2 1.8E-11 6.3E-16 127.3 8.1 109 614-722 74-190 (275)
289 2h1r_A Dimethyladenosine trans 99.2 5.5E-11 1.9E-15 125.3 11.8 110 602-715 29-153 (299)
290 2f8l_A Hypothetical protein LM 99.2 8.1E-11 2.8E-15 127.2 13.4 116 605-722 119-257 (344)
291 1wxx_A TT1595, hypothetical pr 99.2 3.3E-11 1.1E-15 132.1 10.0 107 615-723 209-327 (382)
292 3v97_A Ribosomal RNA large sub 99.2 6.3E-11 2.2E-15 138.9 13.0 107 614-723 538-659 (703)
293 2nyu_A Putative ribosomal RNA 99.2 4.9E-11 1.7E-15 117.9 10.0 108 604-723 10-147 (196)
294 3k0b_A Predicted N6-adenine-sp 99.2 1.6E-10 5.5E-15 126.0 14.1 120 603-722 189-351 (393)
295 3ldu_A Putative methylase; str 99.2 1.5E-10 5.3E-15 126.0 13.5 120 603-722 183-345 (385)
296 2jjq_A Uncharacterized RNA met 99.2 2.7E-10 9.4E-15 125.5 15.1 108 602-721 280-387 (425)
297 2okc_A Type I restriction enzy 99.1 7.5E-11 2.6E-15 131.9 10.2 121 602-722 158-308 (445)
298 3gru_A Dimethyladenosine trans 99.1 4.5E-10 1.5E-14 117.0 15.1 90 601-694 36-126 (295)
299 3ldg_A Putative uncharacterize 99.1 4.8E-10 1.6E-14 121.6 15.8 120 603-722 182-344 (384)
300 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3.9E-10 1.3E-14 125.4 15.2 131 579-720 253-388 (433)
301 2p41_A Type II methyltransfera 99.1 2.6E-11 9E-16 127.7 5.2 115 603-723 70-193 (305)
302 2i0z_A NAD(FAD)-utilizing dehy 99.1 6.3E-10 2.2E-14 124.9 15.5 59 210-268 132-191 (447)
303 1qam_A ERMC' methyltransferase 99.1 2.1E-10 7.2E-15 117.2 10.2 113 601-719 16-144 (244)
304 2cmg_A Spermidine synthase; tr 99.1 1E-10 3.4E-15 120.5 6.8 98 614-721 71-171 (262)
305 2gqf_A Hypothetical protein HI 99.1 6.3E-10 2.2E-14 122.6 13.6 58 210-268 107-168 (401)
306 3cgv_A Geranylgeranyl reductas 99.1 5.8E-10 2E-14 123.3 13.3 56 213-268 103-162 (397)
307 3rp8_A Flavoprotein monooxygen 99.1 9.3E-10 3.2E-14 122.2 14.9 54 213-268 128-181 (407)
308 2xyq_A Putative 2'-O-methyl tr 99.1 4.6E-10 1.6E-14 116.3 11.4 96 611-722 59-172 (290)
309 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.8E-09 6.2E-14 113.6 16.0 117 606-724 93-237 (309)
310 3da1_A Glycerol-3-phosphate de 99.1 4.9E-10 1.7E-14 129.0 12.1 57 212-268 170-232 (561)
311 3b5i_A S-adenosyl-L-methionine 99.0 4.9E-08 1.7E-12 104.6 26.4 173 601-774 33-299 (374)
312 2vou_A 2,6-dihydroxypyridine h 99.0 2.7E-09 9.1E-14 118.0 16.9 55 213-269 100-154 (397)
313 2ih2_A Modification methylase 99.0 4.6E-10 1.6E-14 125.2 10.4 111 603-723 27-166 (421)
314 3nlc_A Uncharacterized protein 99.0 5.1E-10 1.7E-14 127.1 10.2 56 213-268 221-277 (549)
315 2qa2_A CABE, polyketide oxygen 99.0 3.7E-09 1.3E-13 120.0 15.6 62 213-274 108-173 (499)
316 2r6z_A UPF0341 protein in RSP 99.0 4.5E-10 1.6E-14 115.2 7.2 115 606-723 74-218 (258)
317 2qa1_A PGAE, polyketide oxygen 99.0 3.7E-09 1.3E-13 120.1 15.4 62 213-274 107-172 (500)
318 3tqs_A Ribosomal RNA small sub 99.0 2.6E-09 8.8E-14 109.1 12.6 86 602-692 16-106 (255)
319 3fut_A Dimethyladenosine trans 99.0 2.1E-09 7E-14 110.6 11.8 109 602-720 34-144 (271)
320 2x3n_A Probable FAD-dependent 99.0 9.6E-10 3.3E-14 121.7 10.1 62 213-274 108-173 (399)
321 4hb9_A Similarities with proba 99.0 6.7E-10 2.3E-14 123.4 8.6 54 213-269 113-167 (412)
322 3nix_A Flavoprotein/dehydrogen 99.0 1E-09 3.6E-14 122.4 9.6 56 213-268 107-166 (421)
323 3alj_A 2-methyl-3-hydroxypyrid 98.9 9.7E-09 3.3E-13 112.7 16.8 58 213-273 108-166 (379)
324 3bt7_A TRNA (uracil-5-)-methyl 98.9 3.2E-09 1.1E-13 115.5 12.4 111 601-722 200-327 (369)
325 4gqb_A Protein arginine N-meth 98.9 5.1E-09 1.7E-13 119.0 14.4 103 615-718 357-464 (637)
326 1y0p_A Fumarate reductase flav 98.9 1.3E-08 4.5E-13 117.8 18.1 56 212-267 255-316 (571)
327 3i3l_A Alkylhalidase CMLS; fla 98.9 7.1E-09 2.4E-13 119.6 15.6 56 213-268 129-188 (591)
328 2rgh_A Alpha-glycerophosphate 98.9 8.8E-09 3E-13 118.8 16.3 57 212-268 188-250 (571)
329 3ihg_A RDME; flavoenzyme, anth 98.9 3.8E-09 1.3E-13 121.5 13.2 61 213-273 121-189 (535)
330 2dul_A N(2),N(2)-dimethylguano 98.9 3.4E-09 1.2E-13 114.7 11.7 100 615-721 47-164 (378)
331 3fmw_A Oxygenase; mithramycin, 98.9 2.3E-09 7.7E-14 123.6 10.7 61 213-273 149-213 (570)
332 4at0_A 3-ketosteroid-delta4-5a 98.9 3.1E-09 1.1E-13 121.3 11.6 59 210-268 200-264 (510)
333 2xdo_A TETX2 protein; tetracyc 98.9 8.2E-09 2.8E-13 114.1 14.5 54 213-268 129-182 (398)
334 1qo8_A Flavocytochrome C3 fuma 98.9 1.1E-08 3.8E-13 118.3 16.0 57 212-268 250-312 (566)
335 1k0i_A P-hydroxybenzoate hydro 98.9 4.6E-09 1.6E-13 116.0 12.2 57 213-269 104-164 (394)
336 3gwf_A Cyclohexanone monooxyge 98.9 3.2E-09 1.1E-13 121.4 11.1 54 214-267 89-146 (540)
337 3axs_A Probable N(2),N(2)-dime 98.9 2.1E-09 7.1E-14 116.2 8.8 102 614-721 51-158 (392)
338 2qcu_A Aerobic glycerol-3-phos 98.9 1.2E-08 4.2E-13 116.1 15.7 57 212-268 149-210 (501)
339 1m6y_A S-adenosyl-methyltransf 98.9 1.7E-09 5.8E-14 113.0 7.8 86 604-691 15-107 (301)
340 4ap3_A Steroid monooxygenase; 98.9 3.3E-09 1.1E-13 121.6 10.6 38 2-39 23-60 (549)
341 2qfm_A Spermine synthase; sper 98.9 2.2E-09 7.6E-14 113.2 8.2 110 614-723 187-316 (364)
342 4a9w_A Monooxygenase; baeyer-v 98.9 5.9E-09 2E-13 113.2 11.7 55 213-268 77-132 (357)
343 1rp0_A ARA6, thiazole biosynth 98.9 1E-08 3.5E-13 107.4 12.2 37 2-38 41-78 (284)
344 3cvo_A Methyltransferase-like 98.9 1.5E-08 5.2E-13 98.4 12.3 100 614-722 29-155 (202)
345 3itj_A Thioredoxin reductase 1 98.8 3.4E-09 1.2E-13 114.3 8.3 41 1-41 23-67 (338)
346 3o0h_A Glutathione reductase; 98.8 2.7E-08 9.2E-13 112.8 15.5 55 212-266 232-286 (484)
347 3f8d_A Thioredoxin reductase ( 98.8 9.8E-09 3.3E-13 109.8 11.2 53 214-267 72-124 (323)
348 3oz2_A Digeranylgeranylglycero 98.8 1.6E-08 5.5E-13 111.5 13.3 56 213-268 103-162 (397)
349 3c96_A Flavin-containing monoo 98.8 1.3E-08 4.5E-13 112.9 12.6 60 213-273 108-175 (410)
350 3e1t_A Halogenase; flavoprotei 98.8 1.5E-08 5E-13 115.8 12.9 56 213-268 112-172 (512)
351 2zbw_A Thioredoxin reductase; 98.8 7.3E-09 2.5E-13 111.6 9.9 53 214-266 67-119 (335)
352 3c4n_A Uncharacterized protein 98.8 6E-10 2.1E-14 123.5 1.1 56 212-268 172-236 (405)
353 2ar0_A M.ecoki, type I restric 98.8 1.2E-08 4E-13 116.1 11.6 148 567-722 126-313 (541)
354 3lzw_A Ferredoxin--NADP reduct 98.8 6.3E-09 2.2E-13 111.8 9.0 53 213-266 68-121 (332)
355 2oyr_A UPF0341 protein YHIQ; a 98.8 2.2E-09 7.4E-14 109.4 4.7 107 605-715 76-194 (258)
356 1d4d_A Flavocytochrome C fumar 98.8 5.8E-08 2E-12 112.2 17.1 56 212-267 255-316 (572)
357 2gv8_A Monooxygenase; FMO, FAD 98.8 6E-09 2E-13 117.1 8.6 56 213-268 116-177 (447)
358 2efj_A 3,7-dimethylxanthine me 98.8 2E-07 6.9E-12 99.8 19.8 154 616-773 53-292 (384)
359 3oc4_A Oxidoreductase, pyridin 98.8 1.3E-08 4.3E-13 114.5 10.9 54 212-266 189-242 (452)
360 3uzu_A Ribosomal RNA small sub 98.8 1.1E-08 3.9E-13 105.8 9.4 85 602-692 29-124 (279)
361 3atr_A Conserved archaeal prot 98.8 3.7E-08 1.3E-12 110.8 14.1 57 213-269 101-163 (453)
362 3fg2_P Putative rubredoxin red 98.8 7.4E-08 2.5E-12 106.5 16.3 57 211-267 183-240 (404)
363 3lxd_A FAD-dependent pyridine 98.8 9.1E-08 3.1E-12 106.2 17.0 56 212-267 194-250 (415)
364 3ua3_A Protein arginine N-meth 98.8 9.1E-09 3.1E-13 116.0 8.7 102 616-718 410-531 (745)
365 3ab1_A Ferredoxin--NADP reduct 98.8 1.3E-08 4.3E-13 110.9 9.8 54 214-267 76-130 (360)
366 1w4x_A Phenylacetone monooxyge 98.8 2.1E-08 7E-13 115.4 11.9 37 2-38 18-54 (542)
367 3v97_A Ribosomal RNA large sub 98.8 3.4E-08 1.2E-12 115.9 13.9 120 603-722 178-348 (703)
368 2aqj_A Tryptophan halogenase, 98.8 5.8E-08 2E-12 111.7 15.3 56 212-268 165-222 (538)
369 3ftd_A Dimethyladenosine trans 98.8 2.8E-08 9.5E-13 101.3 11.1 86 601-692 17-105 (249)
370 3d1c_A Flavin-containing putat 98.7 2.6E-08 8.8E-13 108.8 11.4 53 214-267 90-142 (369)
371 2bry_A NEDD9 interacting prote 98.7 2.6E-08 9E-13 113.0 11.8 56 213-268 167-230 (497)
372 4dna_A Probable glutathione re 98.7 5.8E-08 2E-12 109.5 14.3 55 212-267 211-267 (463)
373 3uox_A Otemo; baeyer-villiger 98.7 1.4E-08 4.9E-13 116.2 9.4 37 2-38 11-47 (545)
374 2h88_A Succinate dehydrogenase 98.7 5.2E-08 1.8E-12 112.7 14.0 57 212-268 155-217 (621)
375 3khk_A Type I restriction-modi 98.7 1.6E-08 5.5E-13 114.7 9.3 148 566-722 201-396 (544)
376 1qyr_A KSGA, high level kasuga 98.7 8.8E-09 3E-13 105.1 6.3 85 602-692 8-100 (252)
377 2wdq_A Succinate dehydrogenase 98.7 1.1E-07 3.7E-12 109.9 16.3 57 212-268 143-206 (588)
378 2bs2_A Quinol-fumarate reducta 98.7 5.3E-08 1.8E-12 113.5 13.7 57 212-268 158-220 (660)
379 1xdi_A RV3303C-LPDA; reductase 98.7 4.3E-08 1.5E-12 111.6 12.5 56 212-267 223-278 (499)
380 2weu_A Tryptophan 5-halogenase 98.7 7.7E-08 2.6E-12 110.0 14.6 56 212-268 173-230 (511)
381 3jsk_A Cypbp37 protein; octame 98.7 7.3E-08 2.5E-12 101.8 13.0 37 2-38 81-119 (344)
382 2e4g_A Tryptophan halogenase; 98.7 9.8E-08 3.4E-12 109.9 14.7 56 212-268 194-252 (550)
383 3ll7_A Putative methyltransfer 98.7 1E-08 3.5E-13 110.9 5.9 78 613-692 91-173 (410)
384 1trb_A Thioredoxin reductase; 98.7 2.8E-08 9.6E-13 106.2 9.4 56 212-267 184-246 (320)
385 2xve_A Flavin-containing monoo 98.7 5.2E-08 1.8E-12 109.6 11.9 39 1-39 3-47 (464)
386 2pyx_A Tryptophan halogenase; 98.7 1.6E-07 5.6E-12 107.5 16.1 55 213-268 176-233 (526)
387 3iwa_A FAD-dependent pyridine 98.7 6.6E-08 2.3E-12 109.3 12.5 57 211-267 201-257 (472)
388 1ges_A Glutathione reductase; 98.7 1.6E-07 5.4E-12 105.3 15.4 55 212-266 208-263 (450)
389 1mo9_A ORF3; nucleotide bindin 98.7 1.3E-07 4.4E-12 108.2 14.8 56 212-267 255-315 (523)
390 2r0c_A REBC; flavin adenine di 98.7 8.4E-08 2.9E-12 110.4 12.3 58 213-273 139-202 (549)
391 2gmh_A Electron transfer flavo 98.7 1.1E-07 3.8E-12 109.9 13.3 56 213-268 145-217 (584)
392 2q0l_A TRXR, thioredoxin reduc 98.7 9.4E-08 3.2E-12 101.6 11.8 51 216-267 63-113 (311)
393 2ywl_A Thioredoxin reductase r 98.6 1.7E-07 5.8E-12 90.8 12.1 52 214-267 58-109 (180)
394 2gjc_A Thiazole biosynthetic e 98.6 1.4E-07 4.7E-12 99.2 12.0 37 2-38 67-105 (326)
395 2zxi_A TRNA uridine 5-carboxym 98.6 2.3E-07 7.9E-12 105.7 14.6 55 213-268 124-180 (637)
396 2cul_A Glucose-inhibited divis 98.6 2.5E-07 8.4E-12 93.7 13.5 54 213-267 69-124 (232)
397 2q7v_A Thioredoxin reductase; 98.6 1.3E-07 4.6E-12 101.1 12.0 36 2-38 10-45 (325)
398 2qae_A Lipoamide, dihydrolipoy 98.6 1.1E-07 3.9E-12 107.2 11.7 56 212-267 215-275 (468)
399 4fk1_A Putative thioredoxin re 98.6 9E-08 3.1E-12 101.5 10.2 35 2-37 8-42 (304)
400 2yqu_A 2-oxoglutarate dehydrog 98.6 1.8E-07 6.1E-12 105.2 12.9 56 212-267 208-263 (455)
401 3urh_A Dihydrolipoyl dehydroge 98.6 1.7E-07 5.9E-12 106.4 12.7 55 212-266 239-298 (491)
402 3evf_A RNA-directed RNA polyme 98.6 1E-07 3.6E-12 95.4 9.4 118 602-723 61-186 (277)
403 2v3a_A Rubredoxin reductase; a 98.6 4.7E-07 1.6E-11 99.3 15.6 56 212-267 187-242 (384)
404 1m6e_X S-adenosyl-L-methionnin 98.6 1.9E-07 6.6E-12 99.1 11.8 157 616-773 52-280 (359)
405 3lkd_A Type I restriction-modi 98.6 2.7E-07 9.2E-12 104.4 13.8 147 568-722 175-359 (542)
406 1fec_A Trypanothione reductase 98.6 1.1E-07 3.6E-12 107.9 10.5 56 212-267 231-287 (490)
407 1chu_A Protein (L-aspartate ox 98.6 1.6E-07 5.5E-12 107.4 12.0 35 2-37 10-44 (540)
408 3fbs_A Oxidoreductase; structu 98.6 1.1E-07 3.7E-12 100.3 9.8 51 216-267 60-111 (297)
409 2r9z_A Glutathione amide reduc 98.6 2.2E-07 7.4E-12 104.6 12.8 56 212-267 207-263 (463)
410 3ef6_A Toluene 1,2-dioxygenase 98.6 3.1E-07 1.1E-11 101.6 13.8 56 212-267 185-240 (410)
411 3ces_A MNMG, tRNA uridine 5-ca 98.6 3.3E-07 1.1E-11 104.8 14.0 55 213-268 125-181 (651)
412 3ics_A Coenzyme A-disulfide re 98.6 1.3E-07 4.3E-12 110.1 10.7 54 212-267 228-281 (588)
413 1vdc_A NTR, NADPH dependent th 98.6 7.6E-08 2.6E-12 103.4 8.0 52 214-267 72-123 (333)
414 3lad_A Dihydrolipoamide dehydr 98.6 7E-07 2.4E-11 101.0 16.4 55 212-266 221-278 (476)
415 1kf6_A Fumarate reductase flav 98.6 3.5E-07 1.2E-11 105.9 14.1 57 212-268 134-197 (602)
416 3k30_A Histamine dehydrogenase 98.6 7.7E-08 2.6E-12 113.9 8.7 40 1-40 392-431 (690)
417 2hqm_A GR, grase, glutathione 98.6 8.2E-08 2.8E-12 108.6 8.5 55 212-266 226-283 (479)
418 3cty_A Thioredoxin reductase; 98.6 2.1E-07 7.3E-12 99.3 11.2 49 217-267 77-125 (319)
419 1fl2_A Alkyl hydroperoxide red 98.5 2.5E-07 8.4E-12 98.3 11.3 51 217-267 61-114 (310)
420 2wpf_A Trypanothione reductase 98.5 1.4E-07 4.7E-12 107.1 9.9 55 212-266 235-290 (495)
421 1dxl_A Dihydrolipoamide dehydr 98.5 1.9E-07 6.5E-12 105.5 10.9 56 212-267 218-278 (470)
422 3r9u_A Thioredoxin reductase; 98.5 3.4E-08 1.2E-12 105.1 4.5 39 1-40 5-44 (315)
423 2dkh_A 3-hydroxybenzoate hydro 98.5 2.1E-07 7E-12 109.1 11.5 62 213-274 142-218 (639)
424 1zk7_A HGII, reductase, mercur 98.5 2.9E-07 1E-11 103.8 12.3 55 212-267 216-270 (467)
425 2e5v_A L-aspartate oxidase; ar 98.5 3.2E-07 1.1E-11 103.3 12.2 55 212-268 119-176 (472)
426 3s5w_A L-ornithine 5-monooxyge 98.5 3.4E-07 1.2E-11 103.3 12.4 53 214-266 129-190 (463)
427 1zmd_A Dihydrolipoyl dehydroge 98.5 2.7E-07 9.2E-12 104.3 10.8 56 212-267 220-281 (474)
428 3ntd_A FAD-dependent pyridine 98.5 3.5E-07 1.2E-11 106.0 11.9 56 212-267 192-266 (565)
429 1onf_A GR, grase, glutathione 98.5 1.1E-06 3.7E-11 99.9 15.1 56 212-267 217-274 (500)
430 3h8l_A NADH oxidase; membrane 98.5 2.5E-07 8.6E-12 102.5 9.5 51 212-266 218-268 (409)
431 2qy6_A UPF0209 protein YFCK; s 98.5 3.5E-07 1.2E-11 93.2 9.7 132 587-719 29-211 (257)
432 3o4f_A Spermidine synthase; am 98.5 5E-07 1.7E-11 92.8 10.6 109 614-723 82-200 (294)
433 1y56_A Hypothetical protein PH 98.5 1.1E-07 3.6E-12 108.0 6.2 48 220-267 265-312 (493)
434 2cdu_A NADPH oxidase; flavoenz 98.5 1.1E-06 3.8E-11 98.6 14.3 55 212-267 191-246 (452)
435 3cp8_A TRNA uridine 5-carboxym 98.5 7.7E-07 2.6E-11 101.8 12.8 55 213-268 118-174 (641)
436 4b1b_A TRXR, thioredoxin reduc 98.4 8.3E-07 2.8E-11 100.9 12.8 82 185-266 231-317 (542)
437 2a8x_A Dihydrolipoyl dehydroge 98.4 8.7E-07 3E-11 99.8 13.0 56 212-267 212-270 (464)
438 3dgz_A Thioredoxin reductase 2 98.4 6.6E-07 2.3E-11 101.5 11.4 55 212-266 225-285 (488)
439 3dk9_A Grase, GR, glutathione 98.4 1E-06 3.5E-11 99.6 12.5 55 212-266 228-291 (478)
440 3ic9_A Dihydrolipoamide dehydr 98.4 5.5E-07 1.9E-11 102.1 10.1 54 212-266 215-272 (492)
441 1hyu_A AHPF, alkyl hydroperoxi 98.4 5E-07 1.7E-11 103.1 9.7 52 216-267 271-325 (521)
442 1q1r_A Putidaredoxin reductase 98.4 2.5E-06 8.5E-11 94.9 15.2 56 212-267 191-249 (431)
443 3dgh_A TRXR-1, thioredoxin red 98.4 1.9E-06 6.4E-11 97.6 13.9 55 212-266 227-287 (483)
444 3klj_A NAD(FAD)-dependent dehy 98.4 6E-07 2E-11 98.2 9.4 41 224-266 74-114 (385)
445 3gcz_A Polyprotein; flavivirus 98.4 1.3E-07 4.4E-12 94.9 3.5 117 602-723 77-203 (282)
446 3fpz_A Thiazole biosynthetic e 98.3 2.1E-07 7.2E-12 99.6 4.6 40 1-40 66-107 (326)
447 2a87_A TRXR, TR, thioredoxin r 98.3 1.1E-06 3.7E-11 94.5 10.2 48 218-267 77-125 (335)
448 3l8k_A Dihydrolipoyl dehydroge 98.3 2.7E-06 9.1E-11 95.8 13.8 37 2-38 6-42 (466)
449 4fzv_A Putative methyltransfer 98.3 2E-06 6.9E-11 91.6 11.8 121 606-726 139-289 (359)
450 1ojt_A Surface protein; redox- 98.3 3.1E-07 1.1E-11 104.0 5.8 38 1-38 7-44 (482)
451 1jnr_A Adenylylsulfate reducta 98.3 4.6E-06 1.6E-10 97.5 15.4 56 213-268 152-218 (643)
452 1wg8_A Predicted S-adenosylmet 98.3 9.8E-07 3.3E-11 89.1 8.1 83 604-692 11-99 (285)
453 2wk1_A NOVP; transferase, O-me 98.3 1.6E-06 5.4E-11 89.1 9.6 121 598-722 88-245 (282)
454 3s1s_A Restriction endonucleas 98.3 3.3E-06 1.1E-10 96.9 12.7 111 613-723 319-467 (878)
455 1ebd_A E3BD, dihydrolipoamide 98.3 1.3E-06 4.5E-11 98.1 9.1 37 1-38 4-40 (455)
456 3kd9_A Coenzyme A disulfide re 98.3 1.1E-05 3.9E-10 90.2 16.6 54 212-267 190-243 (449)
457 1pn0_A Phenol 2-monooxygenase; 98.3 3E-06 1E-10 99.4 12.1 59 2-76 10-73 (665)
458 3vrd_B FCCB subunit, flavocyto 98.3 1.4E-06 4.8E-11 96.1 8.9 47 220-266 210-256 (401)
459 1nhp_A NADH peroxidase; oxidor 98.2 2.2E-06 7.4E-11 96.1 9.3 36 1-36 1-38 (447)
460 3gyx_A Adenylylsulfate reducta 98.2 1.7E-06 5.7E-11 100.8 8.4 56 213-268 167-233 (662)
461 3cgb_A Pyridine nucleotide-dis 98.2 2.6E-06 9E-11 96.2 9.3 42 226-267 107-151 (480)
462 3lkz_A Non-structural protein 98.2 2.7E-06 9.3E-11 84.9 8.1 119 601-723 80-206 (321)
463 3qfa_A Thioredoxin reductase 1 98.2 2.5E-06 8.5E-11 97.3 9.0 32 2-33 34-65 (519)
464 3sx6_A Sulfide-quinone reducta 98.1 1.5E-06 5E-11 97.1 5.6 45 220-267 67-111 (437)
465 2k4m_A TR8_protein, UPF0146 pr 98.1 2.9E-06 9.8E-11 75.9 6.0 97 603-724 25-124 (153)
466 4gcm_A TRXR, thioredoxin reduc 98.1 1.6E-06 5.4E-11 92.1 5.1 37 2-39 8-44 (312)
467 3g3e_A D-amino-acid oxidase; F 98.1 1.1E-06 3.7E-11 95.1 3.5 45 212-268 142-186 (351)
468 3c6k_A Spermine synthase; sper 98.1 3.3E-06 1.1E-10 89.4 6.7 109 614-722 204-332 (381)
469 1xhc_A NADH oxidase /nitrite r 98.1 6.1E-06 2.1E-10 89.6 9.0 33 1-34 9-41 (367)
470 2bc0_A NADH oxidase; flavoprot 98.1 3.3E-06 1.1E-10 95.7 6.9 36 1-36 36-74 (490)
471 3p8z_A Mtase, non-structural p 98.1 1.7E-05 5.7E-10 76.5 10.4 117 601-722 64-187 (267)
472 4auk_A Ribosomal RNA large sub 98.0 1.2E-05 4E-10 84.7 9.7 87 613-714 209-296 (375)
473 2eq6_A Pyruvate dehydrogenase 98.0 2.2E-05 7.5E-10 88.2 12.7 50 218-267 216-270 (464)
474 3hyw_A Sulfide-quinone reducta 98.0 3.8E-06 1.3E-10 93.5 6.3 42 223-267 67-108 (430)
475 1c0p_A D-amino acid oxidase; a 98.0 3.5E-06 1.2E-10 91.6 5.7 36 2-37 8-43 (363)
476 4b63_A L-ornithine N5 monooxyg 98.0 4.9E-06 1.7E-10 94.4 7.1 36 2-37 41-76 (501)
477 3ufb_A Type I restriction-modi 98.0 2.5E-05 8.4E-10 88.5 12.6 146 567-722 175-363 (530)
478 2vdc_G Glutamate synthase [NAD 98.0 3E-06 1E-10 94.7 4.7 39 1-39 123-161 (456)
479 3eld_A Methyltransferase; flav 98.0 6.9E-06 2.4E-10 82.9 6.5 117 603-723 69-193 (300)
480 4eqs_A Coenzyme A disulfide re 98.0 3E-05 1E-09 86.3 12.2 51 212-266 188-238 (437)
481 4a5l_A Thioredoxin reductase; 98.0 4E-06 1.4E-10 88.9 4.7 32 2-33 6-37 (314)
482 2px2_A Genome polyprotein [con 97.9 2E-05 6.7E-10 77.6 8.7 112 602-723 60-185 (269)
483 3c4a_A Probable tryptophan hyd 97.9 5.4E-06 1.8E-10 90.7 4.9 35 1-35 1-37 (381)
484 4g6h_A Rotenone-insensitive NA 97.9 9.5E-05 3.3E-09 83.6 15.1 55 212-266 272-330 (502)
485 1nhp_A NADH peroxidase; oxidor 97.9 6.8E-05 2.3E-09 83.8 13.5 48 218-267 197-245 (447)
486 3qvp_A Glucose oxidase; oxidor 97.9 4.5E-05 1.5E-09 87.3 11.4 54 220-273 235-298 (583)
487 1v59_A Dihydrolipoamide dehydr 97.9 5.6E-05 1.9E-09 85.3 12.1 49 218-266 230-285 (478)
488 1ebd_A E3BD, dihydrolipoamide 97.8 6E-05 2.1E-09 84.4 11.9 50 218-267 217-269 (455)
489 2gqw_A Ferredoxin reductase; f 97.8 0.0001 3.5E-09 81.2 12.6 46 218-267 193-238 (408)
490 3ihm_A Styrene monooxygenase A 97.8 1.1E-05 3.6E-10 89.9 4.6 33 1-33 23-55 (430)
491 1o94_A Tmadh, trimethylamine d 97.8 1.3E-05 4.4E-10 95.2 5.4 40 1-40 390-429 (729)
492 2zig_A TTHA0409, putative modi 97.8 6.4E-05 2.2E-09 78.8 10.0 59 602-662 223-281 (297)
493 1ojt_A Surface protein; redox- 97.8 7.6E-05 2.6E-09 84.2 11.1 50 218-267 232-285 (482)
494 3g5s_A Methylenetetrahydrofola 97.8 1.9E-05 6.6E-10 83.6 5.5 39 1-39 2-40 (443)
495 1lvl_A Dihydrolipoamide dehydr 97.7 7.7E-05 2.6E-09 83.6 10.2 34 1-34 172-205 (458)
496 1v59_A Dihydrolipoamide dehydr 97.7 1.3E-05 4.5E-10 90.5 3.9 38 1-38 6-43 (478)
497 2bc0_A NADH oxidase; flavoprot 97.6 0.0003 1E-08 79.4 13.7 47 218-266 242-289 (490)
498 1lvl_A Dihydrolipoamide dehydr 97.6 1.9E-05 6.6E-10 88.5 3.7 53 212-266 212-266 (458)
499 3fim_B ARYL-alcohol oxidase; A 97.6 0.00018 6.2E-09 82.1 11.3 34 2-35 4-38 (566)
500 1ps9_A 2,4-dienoyl-COA reducta 97.6 3.6E-05 1.2E-09 90.6 5.6 39 1-39 374-412 (671)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=1.3e-47 Score=410.83 Aligned_cols=275 Identities=28% Similarity=0.470 Sum_probs=254.5
Q ss_pred chHHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHH
Q 038410 555 TLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIV 634 (850)
Q Consensus 555 ~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la 634 (850)
..+..+++|++|||++|+||+.|++++|+|||++|..+..+++++|.++++.++++++++++.+|||||||+|.++..++
T Consensus 12 ~~~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la 91 (302)
T 3hem_A 12 QLKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAV 91 (302)
T ss_dssp CCCCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHH
T ss_pred cccchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhh-------ChhhHHHHHHHH
Q 038410 635 KQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENV-------GHEYIEEFFGCC 707 (850)
Q Consensus 635 ~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~-------~~~~~~~~~~~~ 707 (850)
++.+++|+|+|+|+++++.|+++++..+++++++++++|+.++ +++||+|+++.+++|+ +.+++..+++++
T Consensus 92 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~ 169 (302)
T 3hem_A 92 AEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKF 169 (302)
T ss_dssp HHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHH
T ss_pred HhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHH
Confidence 9867999999999999999999999999998999999999988 4899999999999999 657889999999
Q ss_pred HhccccCeEEEEEEecCCCCcCCCCcCc---------cccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHH
Q 038410 708 ESLLAEHGLLLLQFSSVPDQCYDGHRLS---------PGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFY 778 (850)
Q Consensus 708 ~r~LkpgG~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~ 778 (850)
.++|||||++++++++.+.......... .+|+.+|+||++.+|+..++.+.+++ +||+++++++++.||.
T Consensus 170 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~ 248 (302)
T 3hem_A 170 YNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSN-AGWKVERYHRIGANYV 248 (302)
T ss_dssp HHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHH-HTCEEEEEEECGGGHH
T ss_pred HHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHh-CCcEEEEEEeCchhHH
Confidence 9999999999999998765432111111 27899999999999999999988886 7999999999999999
Q ss_pred HHHHHHHHHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEe
Q 038410 779 QTLRCWRTNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSR 833 (850)
Q Consensus 779 ~tl~~w~~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~ 833 (850)
+|+..|.++|.++++++.++ ++++|.|+|++||++|+++|+.|.++++|++++|
T Consensus 249 ~tl~~w~~~~~~~~~~~~~~-~~~~~~~~w~~yl~~~~~~f~~~~~~~~q~~~~~ 302 (302)
T 3hem_A 249 PTLNAWADALQAHKDEAIAL-KGQETCDIYMHYLRGCSDLFRDKYTDVCQFTLVK 302 (302)
T ss_dssp HHHHHHHHHHHHTHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHhHHHHHHH-hCHHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 99999999999999999998 9999999999999999999999999999999987
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=3.6e-44 Score=381.44 Aligned_cols=275 Identities=27% Similarity=0.491 Sum_probs=251.3
Q ss_pred chHHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHH
Q 038410 555 TLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIV 634 (850)
Q Consensus 555 ~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la 634 (850)
+.++++++|++|||++|+||+.|++++|+|||+||..+..++++||.++++.+++.++++++.+|||||||+|.++..++
T Consensus 4 ~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~ 83 (287)
T 1kpg_A 4 ELKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAV 83 (287)
T ss_dssp CSCCCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHH
T ss_pred cccccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhhChhhHHHHHHHHHhccccC
Q 038410 635 KQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEH 714 (850)
Q Consensus 635 ~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~Lkpg 714 (850)
++.+++|+|+|+|+++++.|++++++.++.++++++++|+.+++ ++||+|++.++++|++++++..+++++.++||||
T Consensus 84 ~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 161 (287)
T 1kpg_A 84 EKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD 161 (287)
T ss_dssp HHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC
Confidence 76688999999999999999999999898889999999998887 7999999999999998778999999999999999
Q ss_pred eEEEEEEecCCCCcCC---------CCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHH
Q 038410 715 GLLLLQFSSVPDQCYD---------GHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWR 785 (850)
Q Consensus 715 G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~ 785 (850)
|+++++++........ ......+|+.+++||++.+|+..++.+.+.+ +||++++++.++.||.+|+..|.
T Consensus 162 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~~~~~~w~ 240 (287)
T 1kpg_A 162 GVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA-NGFTVTRVQSLQPHYAKTLDLWS 240 (287)
T ss_dssp CEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHT-TTCEEEEEEECHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHh-CCcEEEEEEeCcHhHHHHHHHHH
Confidence 9999999886543210 0012345778899999999999999888875 79999999999999999999999
Q ss_pred HHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEe
Q 038410 786 TNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSR 833 (850)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~ 833 (850)
++|.++++++.+. +++++.++|++||++|+++|+.|.++++|++++|
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k 287 (287)
T 1kpg_A 241 AALQANKGQAIAL-QSEEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK 287 (287)
T ss_dssp HHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 9999999999987 5777888899999999999999999999999987
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=8.3e-43 Score=376.53 Aligned_cols=281 Identities=26% Similarity=0.456 Sum_probs=249.3
Q ss_pred ccCchHHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHH
Q 038410 552 RKNTLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAI 631 (850)
Q Consensus 552 ~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~ 631 (850)
++|+.+.++++|++|||++++||+.+++++++|++++|+.+..+++++|.++++.+++.++++++.+|||||||+|.++.
T Consensus 27 ~~~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~ 106 (318)
T 2fk8_A 27 SPTKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMR 106 (318)
T ss_dssp -----------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHH
T ss_pred ccCChhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhhChhhHHHHHHHHHhcc
Q 038410 632 EIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENVGHEYIEEFFGCCESLL 711 (850)
Q Consensus 632 ~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~L 711 (850)
.+++..+++|+|+|+|+++++.|++++...++.++++++++|+.+++ ++||+|++..+++|++.+++..+++++.++|
T Consensus 107 ~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 107 RAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIM 184 (318)
T ss_dssp HHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHS
T ss_pred HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhc
Confidence 99987788999999999999999999999998888999999999886 7899999999999999888999999999999
Q ss_pred ccCeEEEEEEecCCCCcCCCC---------cCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHH
Q 038410 712 AEHGLLLLQFSSVPDQCYDGH---------RLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLR 782 (850)
Q Consensus 712 kpgG~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~ 782 (850)
||||+++++++..+....... ....+|+.+++||++.+|+.+++.+.+++ +||++++++.++.||..++.
T Consensus 185 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~~~~~ 263 (318)
T 2fk8_A 185 PADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEK-AGFTVPEPLSLRPHYIKTLR 263 (318)
T ss_dssp CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHH-TTCBCCCCEECHHHHHHHHH
T ss_pred CCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHh-CCCEEEEEEecchhHHHHHH
Confidence 999999999988665321100 01236788899999999999999888886 79999999999999999999
Q ss_pred HHHHHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEecCC
Q 038410 783 CWRTNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSRPSI 836 (850)
Q Consensus 783 ~w~~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~~~~ 836 (850)
.|.++|.++++++.+. +++.|.|+|.+||++|+++|+.|.++++|++++||..
T Consensus 264 ~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k~~~ 316 (318)
T 2fk8_A 264 IWGDTLQSNKDKAIEV-TSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGA 316 (318)
T ss_dssp HHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEeCCC
Confidence 9999999999999887 6999999999999999999999999999999999864
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=326.69 Aligned_cols=394 Identities=20% Similarity=0.215 Sum_probs=273.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--eEEEEecCCCCCCcceEEee-CCeeeecceeeccCC--CchHHHHHHHHcCCCc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGV--EVVLYEKEDSLGGHAKTVTI-DGVDLDIGFMLFNHV--EYPNMMEFLESLGVDM 75 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~--~V~VlEa~~~~GG~~~s~~~-~G~~~d~G~~~~~~~--~~~~~~~l~~~lgl~~ 75 (850)
|||+|||||++||+||++|+++|+ +|+|||+++++||+++|... +|+.+|.|++.+... .++.+.++++++|++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~~ 82 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDS 82 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCcc
Confidence 589999999999999999999999 99999999999999999876 599999999998432 3667889999999985
Q ss_pred ccccce-------eeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcH
Q 038410 76 GTSDMS-------FSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETL 148 (850)
Q Consensus 76 ~~~~~~-------~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (850)
...... ..+.+.+|+...++. .+...+.....+..+..... +..........++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~--~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~s~ 146 (477)
T 3nks_A 83 EVLPVRGDHPAAQNRFLYVGGALHALPT--GLRGLLRPSPPFSKPLFWAG--------------LRELTKPRGKEPDETV 146 (477)
T ss_dssp GEEEECTTSHHHHCEEEEETTEEEECCC--SSCC---CCTTSCSCSSHHH--------------HTTTTSCCCCSSCCBH
T ss_pred eeeecCCCCchhcceEEEECCEEEECCC--ChhhcccccchhhhHHHHHH--------------HHhhhcCCCCCCCcCH
Confidence 543211 123334555544432 12111111111111111111 1111111122357899
Q ss_pred HHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHH------------hh----------------hcC
Q 038410 149 GHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRL------------FQ----------------LFG 200 (850)
Q Consensus 149 ~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~------------~~----------------~~~ 200 (850)
.+|+.+. ++..+.+.++.|++.++|+.+++++ ++...+..+.. +. ...
T Consensus 147 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l---s~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 147 HSFAQRR-LGPEVASLAMDSLCRGVFAGNSREL---SIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp HHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTB---BHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred HHHHHHh-hCHHHHHHHHHHHhcccccCCHHHh---hHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 9999986 7888899999999999999999888 44444333210 00 012
Q ss_pred CCcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCCh
Q 038410 201 HPQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATF 279 (850)
Q Consensus 201 ~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~ 279 (850)
...+++++||++.++++|++.++++|++|++|++|++|+.++++ |.|++. |.++.||+||+|+|++.+.+++++ ..+
T Consensus 223 ~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~ll~~-~~~ 300 (477)
T 3nks_A 223 RWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASVLSELLPA-EAA 300 (477)
T ss_dssp TCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHHHHHHSCG-GGH
T ss_pred CccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHHHHHhccc-cCH
Confidence 34578999999999999999999999999999999999998877 888774 457999999999999999999865 456
Q ss_pred HHHHhhcCcceee-cEEEEecCCCCCCCCCC---------------Cceeeeeccc--CCCceEEEEeccc-----c-C-
Q 038410 280 DETRILGAFRYVY-RDVFLHRDKNFMPQNPA---------------AWSAWNFVGS--TNGKICLTYCLNV-----L-Q- 334 (850)
Q Consensus 280 ~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~~---------------~~~s~~~~~~--~~~~~~~~~~~~~-----l-~- 334 (850)
...+.+..++|.+ .++.+.++.+++|.... .|.+..++.. +++..+++.+++. . .
T Consensus 301 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~ 380 (477)
T 3nks_A 301 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEAS 380 (477)
T ss_dssp HHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHS
T ss_pred HHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccc
Confidence 7788889999998 45678888776653211 1111112211 2255666666541 1 0
Q ss_pred --CCCCC------CCceEEecCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhh-hc-CCCCeEEEcc-ccCCCCCcch
Q 038410 335 --NIGET------SMPFLATLNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHL-IQ-GKRGIWYSGV-DQGYGFPEDG 402 (850)
Q Consensus 335 --~l~~~------~~~~~~~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~-~~-~~~~l~~aG~-~~g~G~~e~A 402 (850)
.+.+. ..++-..++....|.. .+.+|.+++|+|++++......+.. +. ..++|++||+ |.|.|+ ++|
T Consensus 381 ~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv-~~a 459 (477)
T 3nks_A 381 GCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAV-NDC 459 (477)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSH-HHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcH-HHH
Confidence 11111 0111122344334443 4569999999999999988777765 32 3468999999 568888 999
Q ss_pred hhHHHHHHHHhcccc
Q 038410 403 LKVGMIAAHGVLGKS 417 (850)
Q Consensus 403 ~~sG~~aA~~ilg~~ 417 (850)
+.||+.+|++|+++.
T Consensus 460 ~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 460 IESGRQAAVSVLGTE 474 (477)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998764
No 5
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=100.00 E-value=4.1e-33 Score=293.95 Aligned_cols=265 Identities=16% Similarity=0.212 Sum_probs=209.1
Q ss_pred HHHHhhhhccCCChHHHHHhcCCCcceeecccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHH
Q 038410 558 QARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEY--EDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVK 635 (850)
Q Consensus 558 ~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~--~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~ 635 (850)
.+.++|++|||..+++|..++++.+ +|+||..+. .++.+++.++.+.+++++.++++.+|||||||+|.++..+++
T Consensus 4 p~~~~~~~~Yd~~~~~y~~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 81 (273)
T 3bus_A 4 PTPEEVRQMYDDFTDPFARIWGENL--HFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLAT 81 (273)
T ss_dssp -------------------CCGGGC--CCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHH
T ss_pred CcHHHHHHHHcchHHHHHHHcCCCc--eEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHH
Confidence 5678899999999999999999876 569998766 699999999999999999999999999999999999999998
Q ss_pred hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccC
Q 038410 636 QTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEH 714 (850)
Q Consensus 636 ~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~Lkpg 714 (850)
..+++|+|+|+|+++++.|+++++..+++++++++++|+.+++ ++++||+|++..+++|+++ ...+++++.++||||
T Consensus 82 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 82 ARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPD--RGRALREMARVLRPG 159 (273)
T ss_dssp HSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSC--HHHHHHHHHTTEEEE
T ss_pred hcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCC--HHHHHHHHHHHcCCC
Confidence 7789999999999999999999999999889999999999988 6689999999999999954 689999999999999
Q ss_pred eEEEEEEecCCCCcCCCCcCccccccc--cccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcH
Q 038410 715 GLLLLQFSSVPDQCYDGHRLSPGFITE--YVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQ 792 (850)
Q Consensus 715 G~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~ 792 (850)
|+++++++.......... ...+.. ..++...+++..++.+.+++ +||+++.++.++.+|..++..|.+++.+++
T Consensus 160 G~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (273)
T 3bus_A 160 GTVAIADFVLLAPVEGAK---KEAVDAFRAGGGVLSLGGIDEYESDVRQ-AELVVTSTVDISAQARPSLVKTAEAFENAR 235 (273)
T ss_dssp EEEEEEEEEESSCCCHHH---HHHHHHHHHHHTCCCCCCHHHHHHHHHH-TTCEEEEEEECHHHHTTHHHHHHHHHHHTH
T ss_pred eEEEEEEeeccCCCChhH---HHHHHHHHhhcCccCCCCHHHHHHHHHH-cCCeEEEEEECcHhHHHHHHHHHHHHHHhH
Confidence 999999887543221110 111111 23567788999999888876 799999999999999999999999999998
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEec
Q 038410 793 SEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSRP 834 (850)
Q Consensus 793 ~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~~ 834 (850)
+++... +++++.++|...+ +..|..+.++.++++++||
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~kp 273 (273)
T 3bus_A 236 SQVEPF-MGAEGLDRMIATF---RGLAEVPEAGYVLIGARKP 273 (273)
T ss_dssp HHHHHH-HCHHHHHHHHHHH---HHHHTCTTEEEEEEEEECC
T ss_pred HHHHhh-cCHHHHHHHHHHH---HHHhhCCCeeEEEEEEECC
Confidence 887765 6777666665433 3348889999999999997
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=3.4e-33 Score=318.97 Aligned_cols=397 Identities=17% Similarity=0.239 Sum_probs=265.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCC------CeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG------VEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVD 74 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G------~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~ 74 (850)
+||+|||||++||+||++|+++| ++|+|||+++++||++.|...+|+.+|.|++++. ..++++.++++++|++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~-~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFL-ERKKSAPQLVKDLGLE 84 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEE-TTCTHHHHHHHHTTCC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhh-hCCHHHHHHHHHcCCc
Confidence 38999999999999999999999 9999999999999999999999999999999884 4688999999999998
Q ss_pred ccccc--ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHH
Q 038410 75 MGTSD--MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFI 152 (850)
Q Consensus 75 ~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 152 (850)
..... ....+.+.+++...++... ....+.....+..... +. ...........+ .......++.++.+|+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~p~~~~~~~~~~~---~~-~~~~~~~~~~~~---~~~~~~~~~~s~~~~~ 156 (470)
T 3i6d_A 85 HLLVNNATGQSYVLVNRTLHPMPKGA-VMGIPTKIAPFVSTGL---FS-LSGKARAAMDFI---LPASKTKDDQSLGEFF 156 (470)
T ss_dssp TTEEECCCCCEEEECSSCEEECCC--------------------------CCSHHHHHHHH---SCCCSSSSCCBHHHHH
T ss_pred ceeecCCCCccEEEECCEEEECCCCc-ccCCcCchHHhhccCc---CC-HHHHHHHhcCcc---cCCCCCCCCcCHHHHH
Confidence 65431 2223334445544433211 0000000000000000 00 000001111111 1122223688999999
Q ss_pred hhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHH--------Hhh---------------hcCCCcEEEecC
Q 038410 153 KSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCR--------LFQ---------------LFGHPQCVTVRR 209 (850)
Q Consensus 153 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~--------~~~---------------~~~~~~~~~~~g 209 (850)
.+. +...+.+.++.|++.++|+.++++++ +...+..+. +.. ......++++++
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (470)
T 3i6d_A 157 RRR-VGDEVVENLIEPLLSGIYAGDIDKLS---LMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLST 232 (470)
T ss_dssp HHH-SCHHHHHHTHHHHHHHTTCSCTTTBB---HHHHCGGGCC-------------------------------EEEETT
T ss_pred HHh-cCHHHHHHhccchhcEEecCCHHHhh---HHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCC
Confidence 987 88888899999999999999988873 332222110 000 011346788999
Q ss_pred ChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcc
Q 038410 210 HSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFR 289 (850)
Q Consensus 210 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~ 289 (850)
|++.++++|++.+.+ ++|++|++|++|+.++++|.|++.+|+++.||+||+|+|++.+.+++..+ +..+++..++
T Consensus 233 g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~---~~~~~~~~~~ 307 (470)
T 3i6d_A 233 GLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL---PAISHLKNMH 307 (470)
T ss_dssp CTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTS---TTHHHHHTCE
T ss_pred hHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCc---hhhHHHhcCC
Confidence 999999999999864 79999999999999999999999999889999999999999999988653 2467788999
Q ss_pred eee-cEEEEecCCCCCCCCCC-----------------Cceeeeecc-cCCCceEEEEecccc-----CCCCCC-----C
Q 038410 290 YVY-RDVFLHRDKNFMPQNPA-----------------AWSAWNFVG-STNGKICLTYCLNVL-----QNIGET-----S 340 (850)
Q Consensus 290 ~~~-~~v~l~~d~~~~p~~~~-----------------~~~s~~~~~-~~~~~~~~~~~~~~l-----~~l~~~-----~ 340 (850)
|.+ .++++.++.++++.... .|.+..++. .|++..+++.++... ..+.+. .
T Consensus 308 ~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (470)
T 3i6d_A 308 STSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIV 387 (470)
T ss_dssp EEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHH
T ss_pred CCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHH
Confidence 988 56678888877643211 122211222 255666666665421 111110 0
Q ss_pred CceEEe-cCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhh-h-cCCCCeEEEcc-ccCCCCCcchhhHHHHHHHHhcc
Q 038410 341 MPFLAT-LNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHL-I-QGKRGIWYSGV-DQGYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 341 ~~~~~~-l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~-~-~~~~~l~~aG~-~~g~G~~e~A~~sG~~aA~~ilg 415 (850)
.+.+.. ++....|.. ...+|.+++|.|.+++......+.. + ++.+|||+||+ +.|.|+ ++|+.||+++|++|+.
T Consensus 388 ~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv-~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 388 LEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGI-PDCIDQGKAAVSDALT 466 (470)
T ss_dssp HHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCH-HHHHHHHHHHHHHHHH
Confidence 011111 232223333 5669999999999998876665554 2 35679999999 557776 9999999999999975
Q ss_pred c
Q 038410 416 K 416 (850)
Q Consensus 416 ~ 416 (850)
.
T Consensus 467 ~ 467 (470)
T 3i6d_A 467 Y 467 (470)
T ss_dssp H
T ss_pred H
Confidence 3
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=3.9e-32 Score=310.70 Aligned_cols=389 Identities=17% Similarity=0.203 Sum_probs=264.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCccccc-
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD- 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~- 79 (850)
+||+|||||++||+||+.|+++|++|+|||+++++||+++|...+|+.+|.|++++. ..++.+.++++++|+......
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~-~~~~~~~~~~~~~gl~~~~~~~ 95 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFL-DREPATRALAAALNLEGRIRAA 95 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEE-TTCHHHHHHHHHTTCGGGEECS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhh-hhhHHHHHHHHHcCCcceeeec
Confidence 589999999999999999999999999999999999999999999999999999995 457889999999998643321
Q ss_pred ---ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcC-CCCCCCCCcHHHHHhhc
Q 038410 80 ---MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELEN-SPDIDRNETLGHFIKSR 155 (850)
Q Consensus 80 ---~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~l~~~ 155 (850)
....+.+.+|+.+.++. .....+. ..... +.... +.+..... .....++.++.+|+++.
T Consensus 96 ~~~~~~~~~~~~g~~~~~p~--~~~~~~~--~~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~s~~~~l~~~ 158 (478)
T 2ivd_A 96 DPAAKRRYVYTRGRLRSVPA--SPPAFLA--SDILP--LGARL-----------RVAGELFSRRAPEGVDESLAAFGRRH 158 (478)
T ss_dssp CSSCCCEEEEETTEEEECCC--SHHHHHT--CSSSC--HHHHH-----------HHHGGGGCCCCCTTCCCBHHHHHHHH
T ss_pred CccccceEEEECCEEEECCC--CHHHhcc--CCCCC--HHHHH-----------HHhhhhhcCCCCCCCCCCHHHHHHHh
Confidence 11233334454433322 1111110 00111 00100 11111111 11123578999999987
Q ss_pred CCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHH------------Hhh-----------hcCC----CcEEEec
Q 038410 156 GYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCR------------LFQ-----------LFGH----PQCVTVR 208 (850)
Q Consensus 156 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~------------~~~-----------~~~~----~~~~~~~ 208 (850)
+++.+.+.++.|++..+|+.+++++ ++...+..+. +.. .... ..+++++
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
T 2ivd_A 159 -LGHRATQVLLDAVQTGIYAGDVEQL---SVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFD 234 (478)
T ss_dssp -TCHHHHHHTHHHHHHHHHCCCTTTB---BHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEET
T ss_pred -hCHHHHHHHHHHHhceeecCCHHHh---hHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEEC
Confidence 8888889999999999999998887 4433322221 000 1112 6788999
Q ss_pred CChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEe---eCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhh
Q 038410 209 RHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVC---VNGSQEFYNGCVMAVHAPDALRILGNQATFDETRIL 285 (850)
Q Consensus 209 gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l 285 (850)
||++.++++|++.+ |++|++|++|++|+.++++|.|++ .+|+++.||+||+|+|++.+.+++++ +++...+.+
T Consensus 235 gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~-l~~~~~~~l 310 (478)
T 2ivd_A 235 GGLQVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP-LDDALAALV 310 (478)
T ss_dssp TCTHHHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT-TCHHHHHHH
T ss_pred CCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc-cCHHHHHHH
Confidence 99999999999998 679999999999999888899988 67778999999999999999998864 677778888
Q ss_pred cCcceee-cEEEEecCCCCCCCC-CC---------------Cceeeeecc-cCCCceEEEEeccccC-----CCCCC---
Q 038410 286 GAFRYVY-RDVFLHRDKNFMPQN-PA---------------AWSAWNFVG-STNGKICLTYCLNVLQ-----NIGET--- 339 (850)
Q Consensus 286 ~~i~~~~-~~v~l~~d~~~~p~~-~~---------------~~~s~~~~~-~~~~~~~~~~~~~~l~-----~l~~~--- 339 (850)
..+++.+ .++++.++.++++.. .. .|.+..++. .|++..+++.+.+... .+.+.
T Consensus 311 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~ 390 (478)
T 2ivd_A 311 AGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALA 390 (478)
T ss_dssp HTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHH
T ss_pred hcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHH
Confidence 9999988 567788888766542 10 111111111 2445566666554211 11110
Q ss_pred ---CCceEEecCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEEEcccc-CCCCCcchhhHHHHHHHHh
Q 038410 340 ---SMPFLATLNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWYSGVDQ-GYGFPEDGLKVGMIAAHGV 413 (850)
Q Consensus 340 ---~~~~~~~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~aG~~~-g~G~~e~A~~sG~~aA~~i 413 (850)
..++...++....|.. ...+|..++|.|.+++......+.. +...+||||||+|+ |.|+ ++|+.||+++|++|
T Consensus 391 ~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv-~gA~~SG~~aA~~i 469 (478)
T 2ivd_A 391 ALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGL-NDCIRNAAQLADAL 469 (478)
T ss_dssp HHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCH-HHHHHHHHHHHHHH
Confidence 0001111222223332 4569999999998887665554443 22357999999986 7776 99999999999999
Q ss_pred ccc
Q 038410 414 LGK 416 (850)
Q Consensus 414 lg~ 416 (850)
++.
T Consensus 470 ~~~ 472 (478)
T 2ivd_A 470 VAG 472 (478)
T ss_dssp CC-
T ss_pred HHh
Confidence 764
No 8
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6.1e-32 Score=308.74 Aligned_cols=396 Identities=16% Similarity=0.249 Sum_probs=266.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCcccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG--VEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTS 78 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G--~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~ 78 (850)
+||+|||||++||+||++|+++| ++|+|||+++++||++.|....|+.+|.|++.+. ..++.+.++++++|++....
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~-~~~~~~~~l~~~lg~~~~~~ 83 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYV-ARKHILTDLIEAIGLGEKLV 83 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEE-TTSTHHHHHHHHTTCGGGEE
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhh-cccHHHHHHHHHcCCcceEe
Confidence 48999999999999999999999 9999999999999999999999999999999984 56888999999999987543
Q ss_pred c--ceeeEEecCCCccccCCCC--CCchhhHHh--hhccChHHHHHHHHHHhhhHHHHHHHHhhcC-CCCCCCCCcHHHH
Q 038410 79 D--MSFSVSLDKGQGYEWGTRN--GLSSLFAQK--KNVLNPYFWQMLREMMKFKDDVLSYVEELEN-SPDIDRNETLGHF 151 (850)
Q Consensus 79 ~--~~~~~~~~~g~~~~~~~~~--~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ 151 (850)
. ....+.+.+++...++... +++...... ....... ... ........... .....++.++.+|
T Consensus 84 ~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 84 RNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEE-----EKQ-----EVADLLLHPSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp ECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHH-----HHH-----HHHHHHHSCCTTCCCCSSCCBHHHH
T ss_pred ecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChh-----HHH-----HhhCcccCCcccccCCCCCcCHHHH
Confidence 2 1223333445544443211 011000000 0111110 000 01111111111 0012357899999
Q ss_pred HhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHH-H-------HHHhhh---------------cCCCcEEEec
Q 038410 152 IKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLS-F-------CRLFQL---------------FGHPQCVTVR 208 (850)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~-~-------~~~~~~---------------~~~~~~~~~~ 208 (850)
+.+. ++..+.+.++.|++.++|+.++++++.......+. + ...+.. .....+++++
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9986 78888999999999999999999886433222221 1 111000 1246788999
Q ss_pred CChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCc
Q 038410 209 RHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAF 288 (850)
Q Consensus 209 gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i 288 (850)
+|++.++++|++.+.+ ++|++|++|++|+.++++|.|++.+| ++.||+||+|+|++.+.+++...+. +.+..+
T Consensus 233 ~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~----~~~~~~ 305 (475)
T 3lov_A 233 TGLESLIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL----PELEQL 305 (475)
T ss_dssp TCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC----HHHHTC
T ss_pred ChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcCccCH----HHHhcC
Confidence 9999999999999964 79999999999999999999999999 6999999999999999999876322 677889
Q ss_pred ceee-cEEEEecCCCCC----------CCCCC------Cceeeeeccc-CCCceEEEEecccc-----CCCCCC-----C
Q 038410 289 RYVY-RDVFLHRDKNFM----------PQNPA------AWSAWNFVGS-TNGKICLTYCLNVL-----QNIGET-----S 340 (850)
Q Consensus 289 ~~~~-~~v~l~~d~~~~----------p~~~~------~~~s~~~~~~-~~~~~~~~~~~~~l-----~~l~~~-----~ 340 (850)
+|.+ .++++.++.++. |.... .|.+..++.. |+ ...++.++... ..+.+. .
T Consensus 306 ~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~ 384 (475)
T 3lov_A 306 TTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAV 384 (475)
T ss_dssp CEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHH
T ss_pred CCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHH
Confidence 9988 556677776541 11110 1112112222 33 45555555321 111110 0
Q ss_pred CceE-EecCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhh-h-cCCCCeEEEccc-cCCCCCcchhhHHHHHHHHhcc
Q 038410 341 MPFL-ATLNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHL-I-QGKRGIWYSGVD-QGYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 341 ~~~~-~~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~-~-~~~~~l~~aG~~-~g~G~~e~A~~sG~~aA~~ilg 415 (850)
.+.+ ..++....|.. .+.+|.++.|.|.+++......+.. + ++.+|||+||++ .|.|+ ++|+.||+++|++|++
T Consensus 385 ~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~-~~a~~sG~~aA~~i~~ 463 (475)
T 3lov_A 385 LQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGL-PDCVASAKTMIESIEL 463 (475)
T ss_dssp HHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCH-HHHHHHHHHHHHHHHH
Confidence 0011 11233223333 5669999999999999877666655 2 356799999984 46676 9999999999999987
Q ss_pred cc
Q 038410 416 KS 417 (850)
Q Consensus 416 ~~ 417 (850)
..
T Consensus 464 ~l 465 (475)
T 3lov_A 464 EQ 465 (475)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 9
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.98 E-value=8.4e-32 Score=303.14 Aligned_cols=390 Identities=17% Similarity=0.168 Sum_probs=251.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccC-CCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNH-VEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~-~~~~~~~~l~~~lgl~~~~~~ 79 (850)
|||+|||||++||+||++|+++|++|+|||+++++||++++...+|+.+|.|++.+.+ ..++.+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 7999999999999999999999999999999999999999999999999999865532 345678899999998764332
Q ss_pred ce--eeEE-ecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcC
Q 038410 80 MS--FSVS-LDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRG 156 (850)
Q Consensus 80 ~~--~~~~-~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (850)
.. .... ..++. ..+....... .+.......... +..++.. ....... ...++.++.+|+.+.
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~----~~~~~~~--~~~~~~s~~~~l~~~- 145 (425)
T 3ka7_A 81 SEMTTVRVPLKKGN-PDYVKGFKDI-SFNDFPSLLSYK------DRMKIAL----LIVSTRK--NRPSGSSLQAWIKSQ- 145 (425)
T ss_dssp CCCCEEEEESSTTC-CSSTTCEEEE-EGGGGGGGSCHH------HHHHHHH----HHHHTTT--SCCCSSBHHHHHHHH-
T ss_pred cCCceEEeecCCCc-ccccccccce-ehhhhhhhCCHH------HHHHHHH----HHHhhhh--cCCCCCCHHHHHHHh-
Confidence 21 1111 11110 0010000000 000111111111 0011100 1111111 223578999999988
Q ss_pred CCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCceEeeCCceE
Q 038410 157 YSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVY 236 (850)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~ 236 (850)
+.....+.++.+++...++.+++++ ++......+..... .....++.||++.++++|++.++++|++|++|++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~--~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~ 220 (425)
T 3ka7_A 146 VSDEWLIKFADSFCGWALSLKSDEV---PVEEVFEIIENMYR--FGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVS 220 (425)
T ss_dssp CCCHHHHHHHHHHHHHHHSSCGGGS---BHHHHHHHHHHHHH--HCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred cCCHHHHHHHHHHHHHHhCCCcccc---hHHHHHHHHHHHHh--cCCccccCCCHHHHHHHHHHHHHHcCCEEEECCcee
Confidence 6666778888899888899888887 66555554442211 134568999999999999999999999999999999
Q ss_pred EEEecCCceE-EEeeCCcEEeCCEEEEecChHHHHHhhcCCC----ChHHHHhhcCcceee-cEEEEecCCCCCC-----
Q 038410 237 SVFPADEGCS-IVCVNGSQEFYNGCVMAVHAPDALRILGNQA----TFDETRILGAFRYVY-RDVFLHRDKNFMP----- 305 (850)
Q Consensus 237 ~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~----~~~~~~~l~~i~~~~-~~v~l~~d~~~~p----- 305 (850)
+|..+++++. |++ +|+++.||+||+|+|++.+.++++... +....+.+..+.+.+ .++++.++.+.++
T Consensus 221 ~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~ 299 (425)
T 3ka7_A 221 KILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHTGVL 299 (425)
T ss_dssp EEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSSSEE
T ss_pred EEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcCEEE
Confidence 9999988876 665 577899999999999999999986432 455677778888776 4556777765332
Q ss_pred --CCCC-----Cceeeeecc-cCCCceEEEEecccc-CCCC---CC---CCceEEecCCCCCCcc-ceeeEEeccCCCCh
Q 038410 306 --QNPA-----AWSAWNFVG-STNGKICLTYCLNVL-QNIG---ET---SMPFLATLNPDRTPQN-TLLKWSTGHSVPSV 369 (850)
Q Consensus 306 --~~~~-----~~~s~~~~~-~~~~~~~~~~~~~~l-~~l~---~~---~~~~~~~l~~~~~~~~-~~~~w~~~~p~~~~ 369 (850)
.+.. .+.+...+. .|.+..++....... +... +. ..+.+..+.|...++. .+.+|..++|+|.+
T Consensus 300 ~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~ 379 (425)
T 3ka7_A 300 LTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRA 379 (425)
T ss_dssp ECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSS
T ss_pred ECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCCCceEEEEEEEECCCcccccc
Confidence 2111 111111221 256666654433211 1111 00 0111112222222222 45589999999987
Q ss_pred HHHHHHHHhhhhcCCCCeEEEcccc----CCCCCcchhhHHHHHHHHhcc
Q 038410 370 AASKASLELHLIQGKRGIWYSGVDQ----GYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 370 ~~~~~~~~l~~~~~~~~l~~aG~~~----g~G~~e~A~~sG~~aA~~ilg 415 (850)
++.. .+....+.+|||+||+|+ |.|+ ++|+.||+.+|++|+|
T Consensus 380 ~~~~---~~~~~~p~~gL~laG~~~~~~gg~gv-~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 380 ASGT---DPGNETPFSGLYVVGDGAKGKGGIEV-EGVALGVMSVMEKVLG 425 (425)
T ss_dssp CTTC---CCCSBCSSBTEEECSTTSCCTTCCHH-HHHHHHHHHHHHC---
T ss_pred ccCC---CCCCCCCcCCeEEeCCccCCCCCCcc-HHHHHHHHHHHHHhhC
Confidence 7432 122244667999999976 3666 9999999999999986
No 10
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.97 E-value=3.9e-31 Score=305.41 Aligned_cols=392 Identities=14% Similarity=0.139 Sum_probs=250.9
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCeEEEEecCCCCCCcceEEe-eCCeeeecceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 2 RVAVIGGGMSGLVSAYVLAK-AGVEVVLYEKEDSLGGHAKTVT-IDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-~G~~V~VlEa~~~~GG~~~s~~-~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
||||||||+|||+||++|++ .|++|+|||+++++||+++|.. .+|+.+|.|+|++ ...++.+.+++++++.......
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~-~~~~~~v~~l~~e~~~~~~~~~ 90 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVI-FSHYKYFDDCLDEALPKEDDWY 90 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCC-CCCBHHHHHHHHHHSCSGGGEE
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEe-cCCCHHHHHHHHHhCCccceeE
Confidence 89999999999999999998 4999999999999999999975 4899999999999 4678999999999887654321
Q ss_pred --ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCC
Q 038410 80 --MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGY 157 (850)
Q Consensus 80 --~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (850)
......+.+|+.+.++....+.... ..........+... ..... . ......++.+|+.+. +
T Consensus 91 ~~~~~~~i~~~g~~~~~p~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~-~--~~~~~~s~~~~~~~~-~ 153 (513)
T 4gde_A 91 THQRISYVRCQGQWVPYPFQNNISMLP-------KEEQVKCIDGMIDA------ALEAR-V--ANTKPKTFDEWIVRM-M 153 (513)
T ss_dssp EEECCEEEEETTEEEESSGGGGGGGSC-------HHHHHHHHHHHHHH------HHHHH-T--CCSCCCSHHHHHHHH-H
T ss_pred EecCceEEEECCeEeecchhhhhhhcc-------hhhHHHHHHHHHHH------HHhhh-c--ccccccCHHHHHHHh-h
Confidence 1122334456655554211111110 11111111111111 11111 1 112467899999887 8
Q ss_pred CHHHHHHHHhhhhcccccCCcchhccC---------CHHHHHHHHHHhh-----hcCCCcEEEecCChHHHHHHHHHHhh
Q 038410 158 SELFLKAYLIPICSSVWSCPSDGAMRF---------SAFSVLSFCRLFQ-----LFGHPQCVTVRRHSHSQIDKVSEQLK 223 (850)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~~~~~---------~a~~~~~~~~~~~-----~~~~~~~~~~~gG~~~l~~~L~~~l~ 223 (850)
.+.+.+.++.|+..++|+.++++++.. +............ ......++.++||++.++++|++.++
T Consensus 154 g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~ 233 (513)
T 4gde_A 154 GTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLP 233 (513)
T ss_dssp HHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSC
T ss_pred hhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHH
Confidence 888899999999999999999887532 1111111111000 01112345568999999999999999
Q ss_pred ccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecEE-EEecCCC
Q 038410 224 SWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRDV-FLHRDKN 302 (850)
Q Consensus 224 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~v-~l~~d~~ 302 (850)
+.|++|++|++|++|..++++ |++.+|+++.||+||+|+|++.+.+++.+ .....+...++|.+..+ .+.++..
T Consensus 234 ~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~---~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 234 KEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAMND---QELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp GGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHTTC---HHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred hcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhcCc---hhhHhhhhcccCCceEEEEEEEecc
Confidence 999999999999999987764 55789999999999999999999999864 45667778899988443 4544332
Q ss_pred C-----------CCCCCCCcee------eeecccCCCceE---------------------EEEecc-----ccCCCCCC
Q 038410 303 F-----------MPQNPAAWSA------WNFVGSTNGKIC---------------------LTYCLN-----VLQNIGET 339 (850)
Q Consensus 303 ~-----------~p~~~~~~~s------~~~~~~~~~~~~---------------------~~~~~~-----~l~~l~~~ 339 (850)
. .|.....+.. +.....|++... +..++. .+..+.+.
T Consensus 309 ~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de 388 (513)
T 4gde_A 309 RPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQE 388 (513)
T ss_dssp CCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTT
T ss_pred ccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHH
Confidence 1 1211111110 000011111111 111110 11111111
Q ss_pred --C---CceEEecCCC-CCCcc---ceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEEEccccCCC----CCcchhhH
Q 038410 340 --S---MPFLATLNPD-RTPQN---TLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWYSGVDQGYG----FPEDGLKV 405 (850)
Q Consensus 340 --~---~~~~~~l~~~-~~~~~---~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~aG~~~g~G----~~e~A~~s 405 (850)
. .+.+..+... ..+.. .+.||.+++|+|+.++.+....+.. ++. +|||++|.+..+- -+++|+.+
T Consensus 389 ~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~-~~l~~~GR~g~~~Y~~~n~D~a~~~ 467 (513)
T 4gde_A 389 TILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD-KDIWSRGRFGSWRYEVGNQDHSFML 467 (513)
T ss_dssp THHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-TTEEECSTTTTCCGGGCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh-cCcEEecCCcccCcCCCCHHHHHHH
Confidence 0 0001111221 12221 3459999999999999988877766 433 6999999865443 34889999
Q ss_pred HHHHHHHhcccc
Q 038410 406 GMIAAHGVLGKS 417 (850)
Q Consensus 406 G~~aA~~ilg~~ 417 (850)
|++||+.|+...
T Consensus 468 g~~aa~~I~~g~ 479 (513)
T 4gde_A 468 GVEAVDNIVNGA 479 (513)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHcCC
Confidence 999999998543
No 11
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.97 E-value=1e-30 Score=294.02 Aligned_cols=385 Identities=16% Similarity=0.196 Sum_probs=247.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG-VEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
+||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++. ..++.+.++++++|++.....
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~-~~~~~~~~l~~~~g~~~~~~~ 85 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGV-PSYDTIQEIMDRTGDKVDGPK 85 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBC-TTCHHHHHHHHHHCCCCCSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeec-CCcHHHHHHHHHhCCcccccc
Confidence 58999999999999999999999 9999999999999999999999999999999984 567889999999998876544
Q ss_pred ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhc-----CCCCCCCCCcHHHHHhh
Q 038410 80 MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELE-----NSPDIDRNETLGHFIKS 154 (850)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~l~~ 154 (850)
....+...+|+...... ... . .+ .....+.++............ .........++.+|+++
T Consensus 86 ~~~~~~~~~g~~~~~~~-~~~----~------~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 151 (424)
T 2b9w_A 86 LRREFLHEDGEIYVPEK-DPV----R------GP---QVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLAL 151 (424)
T ss_dssp CCEEEECTTSCEECGGG-CTT----H------HH---HHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHH
T ss_pred ccceeEcCCCCEecccc-Ccc----c------ch---hHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHh
Confidence 44445555554321110 000 0 00 000111111110000000000 00011235799999999
Q ss_pred cCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHH---hhhcCCCcEEEecCChHHHHHHHHHHhhccCceEee
Q 038410 155 RGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRL---FQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIRM 231 (850)
Q Consensus 155 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~ 231 (850)
.+.+. +.+.+..|++...|+ ++.+ .|+...+.++.. .....+. .+.+.+|+++++++|.+.+ +.+|++
T Consensus 152 ~~~~~-~~~~~~~~~~~~~~~-~~~~---~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~l~~~l~~~l---~~~v~~ 222 (424)
T 2b9w_A 152 NGCEA-ARDLWINPFTAFGYG-HFDN---VPAAYVLKYLDFVTMMSFAKGD-LWTWADGTQAMFEHLNATL---EHPAER 222 (424)
T ss_dssp TTCGG-GHHHHTTTTCCCCCC-CTTT---SBHHHHHHHSCHHHHHHHHHTC-CBCCTTCHHHHHHHHHHHS---SSCCBC
T ss_pred hCcHH-HHHHHHHHHHhhccC-ChHh---cCHHHHHHhhhHhhhhcccCCc-eEEeCChHHHHHHHHHHhh---cceEEc
Confidence 87764 667788888887775 3333 477766655441 1112223 3478999999999999988 568999
Q ss_pred CCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecEEEEecC--CC----CCC
Q 038410 232 SCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRDVFLHRD--KN----FMP 305 (850)
Q Consensus 232 ~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~v~l~~d--~~----~~p 305 (850)
|++|++|+.++++|.|++.+|+ +.||+||+|+|++.+.++++ +.+..++.+..+.+.+..+.+... .+ ++|
T Consensus 223 ~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
T 2b9w_A 223 NVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLDYSD--ADDDEREYFSKIIHQQYMVDACLVKEYPTISGYVP 299 (424)
T ss_dssp SCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTTSBC--CCHHHHHHHTTCEEEEEEEEEEEESSCCSSEEECG
T ss_pred CCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhhccC--CCHHHHHHHhcCCcceeEEEEEEeccCCccccccc
Confidence 9999999999888999998885 89999999999998877764 345556677888877633322211 11 223
Q ss_pred CC----CCCceeeeecccCC--CceEEEEeccccCCCCCCCCce--------EEecCCCCCCccce-eeEEeccCCCChH
Q 038410 306 QN----PAAWSAWNFVGSTN--GKICLTYCLNVLQNIGETSMPF--------LATLNPDRTPQNTL-LKWSTGHSVPSVA 370 (850)
Q Consensus 306 ~~----~~~~~s~~~~~~~~--~~~~~~~~~~~l~~l~~~~~~~--------~~~l~~~~~~~~~~-~~w~~~~p~~~~~ 370 (850)
.+ ...|..++....++ ...+..++.+....+.+...+. +.++++. .+..+. ..|.. +|.+...
T Consensus 300 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~-~~~~~~~~~w~~-~p~~~~~ 377 (424)
T 2b9w_A 300 DNMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP-VEKIIEEQTWYY-FPHVSSE 377 (424)
T ss_dssp GGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC-EEEEEEEEEEEE-EEECCHH
T ss_pred CCCCCcCCCcceEEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc-ccccccccceee-eeccCHH
Confidence 32 11122222221122 2344555554444333221111 2335532 122122 26664 6766644
Q ss_pred HHHH--HHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhc
Q 038410 371 ASKA--SLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVL 414 (850)
Q Consensus 371 ~~~~--~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~il 414 (850)
.... ...+..+++.+|+||||+|++.|++|+|+.||+++|+.|+
T Consensus 378 ~~~~G~~~~~~~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 378 DYKAGWYEKVEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp HHHTTHHHHHHHTTTGGGEEECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred HHhccHHHHHHHHhCCCCceEeccccccccHHHHHHHHHHHHHHhc
Confidence 3322 4455556677899999999999999999999999999885
No 12
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.97 E-value=4.7e-30 Score=273.92 Aligned_cols=268 Identities=18% Similarity=0.221 Sum_probs=222.4
Q ss_pred CchHHHHHhhhhccCCCh--HHHHHhc-CCCcceeecccCCC--CCCHHHHHHHHHHHHHHHc----CCCCCCeEEEEcc
Q 038410 554 NTLAQARRNISHHYDVSN--ELFSLFL-GKSMMYSCAIFKSE--YEDLDVAQMRKVSLLIEKA----RVNKGLDVLEIGC 624 (850)
Q Consensus 554 ~~~~~~~~~i~~~Yd~~~--~~~~~~l-~~~~~ys~~~~~~~--~~~l~~aq~~~~~~~~~~l----~~~~~~~vLDiGc 624 (850)
++...+++++..|||..| +||+.++ ++.++ ++||..+ ..++.+++.+..+.+++.+ .++++.+||||||
T Consensus 14 ~~~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGc 91 (297)
T 2o57_A 14 ATSKTVKDNAEIYYDDDDSDRFYFHVWGGEDIH--VGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGA 91 (297)
T ss_dssp --CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC--SCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETC
T ss_pred hhHHHHHHHHHHHcCCccchhHHHHHhCCCceE--EEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCC
Confidence 345677889999999974 9997654 67765 5899888 8899999999999999999 8899999999999
Q ss_pred CccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHH
Q 038410 625 GWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEF 703 (850)
Q Consensus 625 G~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~ 703 (850)
|+|.++..+++..+++|+|+|+|+++++.|+++++..|+.++++++++|+.+++ ++++||+|++..+++|+++ +..+
T Consensus 92 G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~ 169 (297)
T 2o57_A 92 GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKV 169 (297)
T ss_dssp TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSC--HHHH
T ss_pred CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCC--HHHH
Confidence 999999999998788999999999999999999999999889999999999988 6789999999999999965 7999
Q ss_pred HHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecC----CcHHH
Q 038410 704 FGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIG----IHFYQ 779 (850)
Q Consensus 704 ~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~----~~y~~ 779 (850)
++++.++|||||++++.++......... ....+...+.+| .+++..++.+.+.+ +||+++.++++. .+|..
T Consensus 170 l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~~~~~~~ 244 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDPMKEDGIDKS--SIQPILDRIKLH--DMGSLGLYRSLAKE-CGLVTLRTFSRPDSLVHHYSK 244 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEEEECTTCCGG--GGHHHHHHHTCS--SCCCHHHHHHHHHH-TTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEEEeccCCCCchH--HHHHHHHHhcCC--CCCCHHHHHHHHHH-CCCeEEEEEECchhhHHHHHH
Confidence 9999999999999999988755432111 112233333333 36788888887776 799999988765 46666
Q ss_pred HHHHHHHHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEecC
Q 038410 780 TLRCWRTNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSRPS 835 (850)
Q Consensus 780 tl~~w~~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~~~ 835 (850)
++..|.+++ +++.. .+++.+.++|..++..|..+++.|.++..+++++||.
T Consensus 245 ~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~Kp~ 295 (297)
T 2o57_A 245 VKAELIKRS----SEIAS-FCSPEFQANMKRGLEHWIEGGRAGKLTWGGMLFRKSD 295 (297)
T ss_dssp HHHHHHHTH----HHHTT-TSCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEESS
T ss_pred HHHHHHHhH----HHHhc-cCCHHHHHHHHHHHHHHHHhccCCeEEEEEEEEECCC
Confidence 666665543 34444 3789999999999999999999999999999999985
No 13
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.97 E-value=2.1e-30 Score=297.54 Aligned_cols=395 Identities=15% Similarity=0.139 Sum_probs=256.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCcc--ccc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMG--TSD 79 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~--~~~ 79 (850)
||+|||||++||+||++|+++|++|+|||+++++||+++|.+.+|+.+|.|++++. ..++++.++++++|+... ...
T Consensus 41 ~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~-~~~~~~~~~l~~lgl~~~~~~~~ 119 (495)
T 2vvm_A 41 DVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVH-WHQSHVWREITRYKMHNALSPSF 119 (495)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBC-TTSHHHHHHHHHTTCTTCEEESC
T ss_pred CEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEec-CccHHHHHHHHHcCCcceeeccc
Confidence 89999999999999999999999999999999999999999999999999999995 568899999999998432 221
Q ss_pred ----ceeeEEecC--CCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhH-HHHHHHHhhcCC---C--CCCCCCc
Q 038410 80 ----MSFSVSLDK--GQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKD-DVLSYVEELENS---P--DIDRNET 147 (850)
Q Consensus 80 ----~~~~~~~~~--g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~--~~~~~~s 147 (850)
....+.+.+ +....++. .... ..+...+..+.+... .....+...... + ...++.+
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 187 (495)
T 2vvm_A 120 NFSRGVNHFQLRTNPTTSTYMTH--------EAED----ELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMS 187 (495)
T ss_dssp CCSSSCCEEEEESSTTCCEEECH--------HHHH----HHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSB
T ss_pred ccCCCceEEEecCCCCceeecCH--------HHHH----HHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhh
Confidence 111222222 22111110 0000 000111111111000 000000000000 0 0013679
Q ss_pred HHHHHhhcC--CCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhh-----hcCCCcEEEecCChHHHHHHHHH
Q 038410 148 LGHFIKSRG--YSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQ-----LFGHPQCVTVRRHSHSQIDKVSE 220 (850)
Q Consensus 148 ~~~~l~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~~~gG~~~l~~~L~~ 220 (850)
+.+|+++.+ +++.. ..++.+++...++.+++++ ++..++.++.... .......++++||++.++++|++
T Consensus 188 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~ 263 (495)
T 2vvm_A 188 YSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENS---SFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWE 263 (495)
T ss_dssp HHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHH
T ss_pred HHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchh---hHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHH
Confidence 999999876 67664 6788899999999888877 6666666554211 01123456789999999999999
Q ss_pred HhhccC-ceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhh-cCCCChHHHHhhcCcceee-cEEEE
Q 038410 221 QLKSWG-IQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRIL-GNQATFDETRILGAFRYVY-RDVFL 297 (850)
Q Consensus 221 ~l~~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~i~~~~-~~v~l 297 (850)
.+++.| ++|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.++. .++++....+++..+.|.+ .++++
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l 343 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHA 343 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEE
T ss_pred HhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEE
Confidence 999988 99999999999999888899999999889999999999999988875 3445667788888888877 77788
Q ss_pred ecCCCCCCC------CCCCceeeeec--ccCCCceEEEEeccccCCCCCC-----CCceEEecCCC-CCCcc-ceeeEE-
Q 038410 298 HRDKNFMPQ------NPAAWSAWNFV--GSTNGKICLTYCLNVLQNIGET-----SMPFLATLNPD-RTPQN-TLLKWS- 361 (850)
Q Consensus 298 ~~d~~~~p~------~~~~~~s~~~~--~~~~~~~~~~~~~~~l~~l~~~-----~~~~~~~l~~~-~~~~~-~~~~w~- 361 (850)
.++.++++. ..... .+.+. ..+.+..++..+.+....+.+. ..+.+..+.+. ..|.. ...+|.
T Consensus 344 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~vl~~~~~~~~~~~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~W~~ 422 (495)
T 2vvm_A 344 EVDNKDMRSWTGIAYPFNKL-CYAIGDGTTPAGNTHLVCFGNSANHIQPDEDVRETLKAVGQLAPGTFGVKRLVFHNWVK 422 (495)
T ss_dssp EESCGGGGGEEEEECSSCSS-CEEEEEEECTTSCEEEEEEECSTTCCCTTTCHHHHHHHHHTTSTTSCCEEEEEECCTTT
T ss_pred EECCccCCCceeEecCCCCc-EEEecCCCCCCCCeEEEEEeCccccCCCHHHHHHHHHHHHHhcCCCCCceEEEEeEcCC
Confidence 888765421 00000 11121 1244545555555432212111 01111222222 22332 334773
Q ss_pred -----eccCCCChHHHHH-HHHhhhhcCCCCeEEEccccC---CCCCcchhhHHHHHHHHhccc
Q 038410 362 -----TGHSVPSVAASKA-SLELHLIQGKRGIWYSGVDQG---YGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 362 -----~~~p~~~~~~~~~-~~~l~~~~~~~~l~~aG~~~g---~G~~e~A~~sG~~aA~~ilg~ 416 (850)
.+++.+.++.... .+.+ .++.++|||||+++. .|++|+|+.||+++|++|+..
T Consensus 423 dp~~~g~y~~~~~g~~~~~~~~l--~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~ 484 (495)
T 2vvm_A 423 DEFAKGAWFFSRPGMVSECLQGL--REKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEE 484 (495)
T ss_dssp CTTTSSSSCCCCTTHHHHHHHHH--HCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCcCCCcchhhHHHH--hCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHH
Confidence 3566666666532 2333 346789999999763 577799999999999999753
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.97 E-value=8.7e-31 Score=301.53 Aligned_cols=393 Identities=19% Similarity=0.230 Sum_probs=254.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCccccc-
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD- 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~- 79 (850)
+||+|||||++||+||+.|+++|++|+|||+++++||+++|...+|+.+|.|++++. ..++.+.++++++|+......
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~lgl~~~~~~~ 92 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMT-ESEGDVTFLIDSLGLREKQQFP 92 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBC-CCSHHHHHHHHHTTCGGGEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccc-cCcHHHHHHHHHcCCcccceec
Confidence 489999999999999999999999999999999999999999999999999999984 567889999999998754321
Q ss_pred --ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcC-CCCCCCCCcHHHHHhhcC
Q 038410 80 --MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELEN-SPDIDRNETLGHFIKSRG 156 (850)
Q Consensus 80 --~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~l~~~~ 156 (850)
....+.+.+|+.+.++. ....+.. ....... ..+..... .+...... .....++.++.+|++++
T Consensus 93 ~~~~~~~~~~~g~~~~~p~--~~~~~~~--~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~~s~~~~l~~~- 159 (504)
T 1sez_A 93 LSQNKRYIARNGTPVLLPS--NPIDLIK--SNFLSTG--SKLQMLLE------PILWKNKKLSQVSDSHESVSGFFQRH- 159 (504)
T ss_dssp SSCCCEEEESSSSEEECCS--SHHHHHH--SSSSCHH--HHHHHHTH------HHHC----------CCCBHHHHHHHH-
T ss_pred cCCCceEEEECCeEEECCC--CHHHHhc--cccCCHH--HHHHHhHh------hhccCcccccccCCCCccHHHHHHHH-
Confidence 11223344555443322 1111110 0011110 00000000 00000000 00012468999999987
Q ss_pred CCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHH----------------Hhhhc---------------CCCcEE
Q 038410 157 YSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCR----------------LFQLF---------------GHPQCV 205 (850)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~----------------~~~~~---------------~~~~~~ 205 (850)
++..+.+.++.|++.++|+.+++++ ++...+..+. ..... .....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 160 FGKEVVDYLIDPFVAGTCGGDPDSL---SMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HCHHHHHTTHHHHHHHHHSCCGGGS---BHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred cCHHHHHHHHHHHHccccCCChHHh---hHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 8888899999999999999999887 3332221110 00000 122467
Q ss_pred EecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCc------eEEEee--CC---cEEeCCEEEEecChHHHHHhhc
Q 038410 206 TVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG------CSIVCV--NG---SQEFYNGCVMAVHAPDALRILG 274 (850)
Q Consensus 206 ~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~------v~V~~~--~G---~~i~ad~VV~A~p~~~~~~ll~ 274 (850)
+++||+++++++|++.+.+ ++|++|++|++|+.++++ +.|++. +| +++.||+||+|+|+..+.+++.
T Consensus 237 ~~~GG~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~ 314 (504)
T 1sez_A 237 SFLGGMQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKI 314 (504)
T ss_dssp EETTCTHHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEE
T ss_pred eeCcHHHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhh
Confidence 8999999999999998831 789999999999998877 777664 45 5689999999999999999873
Q ss_pred ----CCCChHHHHhhcCcceee-cEEEEecCCCCCCCCCC--------------------Cceeeeecc-cCCCceEEEE
Q 038410 275 ----NQATFDETRILGAFRYVY-RDVFLHRDKNFMPQNPA--------------------AWSAWNFVG-STNGKICLTY 328 (850)
Q Consensus 275 ----~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~~--------------------~~~s~~~~~-~~~~~~~~~~ 328 (850)
.+.++ ..+..+.|.+ .++++.++.+.++.... .|.+..++. .|++..+++.
T Consensus 315 ~~~~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~ 391 (504)
T 1sez_A 315 AKRGNPFLL---NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTT 391 (504)
T ss_dssp ESSSSBCCC---TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEE
T ss_pred cccCCcccH---HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEE
Confidence 11222 2267788877 55567776655432110 122222332 2556666666
Q ss_pred eccc-----cCCCCCC-----CCceEE-ecCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEEEccccC
Q 038410 329 CLNV-----LQNIGET-----SMPFLA-TLNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWYSGVDQG 395 (850)
Q Consensus 329 ~~~~-----l~~l~~~-----~~~~~~-~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~aG~~~g 395 (850)
+... +..+.+. ..+.+. .++....|.. ...+|..++|+|.+++......+.. .++.+|||+||+++.
T Consensus 392 ~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~ 471 (504)
T 1sez_A 392 FVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRG 471 (504)
T ss_dssp EEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSS
T ss_pred EeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCC
Confidence 6542 1111110 000111 1222223433 4569999999999998776655554 456789999999764
Q ss_pred -CCCCcchhhHHHHHHHHhccc
Q 038410 396 -YGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 396 -~G~~e~A~~sG~~aA~~ilg~ 416 (850)
.++ ++|+.||+++|++|+..
T Consensus 472 g~~v-~gai~sG~~aA~~il~~ 492 (504)
T 1sez_A 472 GLSV-GKALSSGCNAADLVISY 492 (504)
T ss_dssp CSSH-HHHHHHHHHHHHHHHHH
T ss_pred CCCH-HHHHHHHHHHHHHHHHH
Confidence 445 99999999999999753
No 15
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=2.3e-30 Score=290.82 Aligned_cols=378 Identities=14% Similarity=0.111 Sum_probs=240.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccC-CCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNH-VEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~-~~~~~~~~l~~~lgl~~~~~~ 79 (850)
|||+|||||++||+||++|+++|++|+|||+++++||++.+...+|+.+|.|++.+.+ ...+.+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 7999999999999999999999999999999999999999999999999999866532 345678899999998654322
Q ss_pred c--eeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCC
Q 038410 80 M--SFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGY 157 (850)
Q Consensus 80 ~--~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (850)
. ...+.. +|+.+.+.... ....+. ....+..+... .. ......++.++.+|+.+.++
T Consensus 81 ~~~~~~~~~-~g~~~~~~~~~----------~~l~~~---~~~~~~~~~~~----~~---~~~~~~~~~s~~~~l~~~g~ 139 (421)
T 3nrn_A 81 SNPKGKILW-EGKIFHYRESW----------KFLSVK---EKAKALKLLAE----IR---MNKLPKEEIPADEWIKEKIG 139 (421)
T ss_dssp CSSSCEEEE-TTEEEEGGGGG----------GGCC-----------CCHHH----HH---TTCCCCCCSBHHHHHHHHTC
T ss_pred CCCCeEEEE-CCEEEEcCCch----------hhCCHh---HHHHHHHHHHH----HH---hccCCCCCCCHHHHHHHhcC
Confidence 1 122222 44444433210 001110 00111111110 00 00111135899999999877
Q ss_pred CHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCceEeeCCceEE
Q 038410 158 SELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYS 237 (850)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~ 237 (850)
+....+.++.|+...+++.++.++ ++......+..... ...+.+++||++.++++|++.++++|++|++|++|++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~ 214 (421)
T 3nrn_A 140 ENEFLLSVLESFAGWADSVSLSDL---TALELAKEIRAALR--WGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVE 214 (421)
T ss_dssp CCHHHHHHHHHHHHHHHSSCGGGS---BHHHHHHHHHHHHH--HCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCcccC---CHHHHHHHHHHHhh--cCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEE
Confidence 777778889999999999988887 66555554442211 1345789999999999999999999999999999999
Q ss_pred EEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhc-CCCChHHHHhhcCcceee-cEEEEecCCCCCC-------CCC
Q 038410 238 VFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILG-NQATFDETRILGAFRYVY-RDVFLHRDKNFMP-------QNP 308 (850)
Q Consensus 238 I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~-~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~~p-------~~~ 308 (850)
|+.++++| | +.+|+++.||+||+|+|++.+.++++ +..++...+.+..+.+.+ ..+++.++.+.++ .+.
T Consensus 215 i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~ 292 (421)
T 3nrn_A 215 INIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGL 292 (421)
T ss_dssp EETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCSSEEECTTS
T ss_pred EEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCCeEEEcCCc
Confidence 99998888 6 45677899999999999999999987 335556677788888876 4455666554221 121
Q ss_pred CCceeeeec-----c-cCCCceEEEEecc--ccC--CCCCCCCceEEecCCCCCCccceeeEEeccCCCChHHHHHHHHh
Q 038410 309 AAWSAWNFV-----G-STNGKICLTYCLN--VLQ--NIGETSMPFLATLNPDRTPQNTLLKWSTGHSVPSVAASKASLEL 378 (850)
Q Consensus 309 ~~~~s~~~~-----~-~~~~~~~~~~~~~--~l~--~l~~~~~~~~~~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~l 378 (850)
. +....+. . .|++..++..... ... ++.+...+.+..+.+ ......+.+|...+|++...... .+
T Consensus 293 ~-~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p-~~~~~~~~~~~~~~p~~~~~~~~---~~ 367 (421)
T 3nrn_A 293 M-INGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFP-EGEPLLAQVYRDGNPVNRTRAGL---HI 367 (421)
T ss_dssp S-SCEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCT-TCEEEEEEEC----------------CC
T ss_pred c-eeeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcC-CCeEEEeeeccCCCCcccccCCC---CC
Confidence 1 1111111 1 2455544433221 100 000000111122223 11111345788888887433222 24
Q ss_pred hhhcCCCCeEEEccccCCC-CC--cchhhHHHHHHHHh
Q 038410 379 HLIQGKRGIWYSGVDQGYG-FP--EDGLKVGMIAAHGV 413 (850)
Q Consensus 379 ~~~~~~~~l~~aG~~~g~G-~~--e~A~~sG~~aA~~i 413 (850)
+ ..+ +|||+||||...+ .. |+|+.||++||+.|
T Consensus 368 ~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 368 E-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp C-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred C-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 4 556 8999999977444 33 99999999999999
No 16
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.97 E-value=5.8e-30 Score=295.40 Aligned_cols=394 Identities=16% Similarity=0.179 Sum_probs=255.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeC-CeeeecceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTID-GVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~-G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
+||||||||++||+||++|+++|++|+|||+++++||+++|.+.. |+.+|.|++++.. .++.+.++++++|++.....
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~-~~~~~~~l~~~lgl~~~~~~ 83 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGP-TQNRILRLAKELGLETYKVN 83 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECT-TCHHHHHHHHHTTCCEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecC-CcHHHHHHHHHcCCcceecc
Confidence 489999999999999999999999999999999999999999985 9999999999954 47889999999999865432
Q ss_pred c-eeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCC-------CCCCCcHHHH
Q 038410 80 M-SFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPD-------IDRNETLGHF 151 (850)
Q Consensus 80 ~-~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~ 151 (850)
. ...+.+.+|+.+.+... ++... .+... .+..++................ ..++.++.+|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~--~p~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 151 (520)
T 1s3e_A 84 EVERLIHHVKGKSYPFRGP--FPPVW-------NPITY---LDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKEL 151 (520)
T ss_dssp CSSEEEEEETTEEEEECSS--SCCCC-------SHHHH---HHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHH
T ss_pred cCCceEEEECCEEEEecCC--CCCCC-------CHHHH---HHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHH
Confidence 2 12223344544444321 11100 00000 0111111111111111100000 0146799999
Q ss_pred HhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHh-------hhcCCCcEEEecCChHHHHHHHHHHhhc
Q 038410 152 IKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLF-------QLFGHPQCVTVRRHSHSQIDKVSEQLKS 224 (850)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~~gG~~~l~~~L~~~l~~ 224 (850)
+++...++.. +.++.+++...++.+++++ |+...+.++... .........+++||++.++++|++.+
T Consensus 152 l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~---s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l-- 225 (520)
T 1s3e_A 152 LDKLCWTESA-KQLATLFVNLCVTAETHEV---SALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLL-- 225 (520)
T ss_dssp HHHHCSSHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHH--
T ss_pred HHhhCCCHHH-HHHHHHHHhhhcCCChHHh---HHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHc--
Confidence 9998666654 7788888888999988877 666666655421 11133456789999999999999988
Q ss_pred cCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhc-CCCChHHHHhhcCcceee-cEEEEecCCC
Q 038410 225 WGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILG-NQATFDETRILGAFRYVY-RDVFLHRDKN 302 (850)
Q Consensus 225 ~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~-~~~~~~~~~~l~~i~~~~-~~v~l~~d~~ 302 (850)
|++|++|++|++|+.++++|.|++.+|+++.||+||+|+|+..+.+++. ++++....+++..+++.+ .++++.++.+
T Consensus 226 -g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (520)
T 1s3e_A 226 -GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEP 304 (520)
T ss_dssp -GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSC
T ss_pred -CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCC
Confidence 7899999999999999889999999998899999999999999888763 445667788889999888 6678999988
Q ss_pred CCCCCCC----------Cceeeeeccc-CC-CceEEEEecc-----ccCCCCCC--CCc---eEEe-cCCC--CCCcc-c
Q 038410 303 FMPQNPA----------AWSAWNFVGS-TN-GKICLTYCLN-----VLQNIGET--SMP---FLAT-LNPD--RTPQN-T 356 (850)
Q Consensus 303 ~~p~~~~----------~~~s~~~~~~-~~-~~~~~~~~~~-----~l~~l~~~--~~~---~~~~-l~~~--~~~~~-~ 356 (850)
+|+.... .+..+.+... ++ +...+..++. .+..+.+. .+. .+.. ++.. ..|.. .
T Consensus 305 ~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~ 384 (520)
T 1s3e_A 305 FWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYE 384 (520)
T ss_dssp GGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEE
T ss_pred cccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEE
Confidence 7754210 0111222221 22 2234444432 12222211 000 1111 2211 12322 3
Q ss_pred eeeEEe------cc-CCCChHHHHHHHHhhhhcCCCCeEEEcccc---CCCCCcchhhHHHHHHHHhcc
Q 038410 357 LLKWST------GH-SVPSVAASKASLELHLIQGKRGIWYSGVDQ---GYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 357 ~~~w~~------~~-p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~---g~G~~e~A~~sG~~aA~~ilg 415 (850)
..+|.. ++ +.+.++...... ....++.+||||||+++ ..|.+++|+.||+++|++|+.
T Consensus 385 ~~~W~~~~~~~G~~~~~~~~g~~~~~~-~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~ 452 (520)
T 1s3e_A 385 EKNWCEEQYSGGCYTTYFPPGILTQYG-RVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILH 452 (520)
T ss_dssp EEEGGGCTTTCSSSCBCCCTTHHHHHG-GGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCCCCccccCCCccccch-HHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHH
Confidence 346642 11 234455432211 11134678999999965 456669999999999999975
No 17
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.96 E-value=1.1e-28 Score=280.15 Aligned_cols=392 Identities=16% Similarity=0.144 Sum_probs=248.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCcccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSDM 80 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~~ 80 (850)
+||+|||||++||+||++|+++|++|+|||+++++||++.|....|+.+|.|++++. ...+.+.++++++|+.......
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 84 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVS-PDQTALISLLDELGLKTFERYR 84 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBC-TTCHHHHHHHHHTTCCEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEec-CccHHHHHHHHHcCCccccccc
Confidence 389999999999999999999999999999999999999999999999999999985 4478889999999998644321
Q ss_pred -eeeEEecC-CCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcC-----CCC--CCCCCcHHHH
Q 038410 81 -SFSVSLDK-GQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELEN-----SPD--IDRNETLGHF 151 (850)
Q Consensus 81 -~~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~s~~~~ 151 (850)
...+.+.+ |+.+.+... +... .+.....+..... ........... .+. ..++.++.+|
T Consensus 85 ~~~~~~~~~~g~~~~~~~~--~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 151 (453)
T 2yg5_A 85 EGESVYISSAGERTRYTGD--SFPT--------NETTKKEMDRLID---EMDDLAAQIGAEEPWAHPLARDLDTVSFKQW 151 (453)
T ss_dssp CSEEEEECTTSCEEEECSS--SCSC--------CHHHHHHHHHHHH---HHHHHHHHHCSSCGGGSTTHHHHHSSBHHHH
T ss_pred CCCEEEEeCCCceeeccCC--CCCC--------ChhhHHHHHHHHH---HHHHHHhhcCCCCCCCCcchhhhhhccHHHH
Confidence 12222222 444444321 1000 0000000111110 11111111110 000 0136799999
Q ss_pred HhhcCCCHHHHHHHHhhhhcccccCCcc-hhccCCHHHHHHHHHHhhh------cCCCcEEEecCChHHHHHHHHHHhhc
Q 038410 152 IKSRGYSELFLKAYLIPICSSVWSCPSD-GAMRFSAFSVLSFCRLFQL------FGHPQCVTVRRHSHSQIDKVSEQLKS 224 (850)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~gG~~~l~~~L~~~l~~ 224 (850)
+.+...++.+ ..++.+++...++.+++ ++ |+...+.++..... .....+++++||++.++++|++.+
T Consensus 152 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l-- 225 (453)
T 2yg5_A 152 LINQSDDAEA-RDNIGLFIAGGMLTKPAHSF---SALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEAL-- 225 (453)
T ss_dssp HHHHCSCHHH-HHHHHHHHCCCCCCSCTTSS---BHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHH--
T ss_pred HHhhcCCHHH-HHHHHHHHHhhcccCCcccc---cHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhc--
Confidence 9998666654 55788888888988887 66 66666555442110 011246789999999999999988
Q ss_pred cCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecChHHHHHhhc-CCCChHHHHhhcCcceee-cEEEEecCC
Q 038410 225 WGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHAPDALRILG-NQATFDETRILGAFRYVY-RDVFLHRDK 301 (850)
Q Consensus 225 ~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~-~~~~~~~~~~l~~i~~~~-~~v~l~~d~ 301 (850)
|++|++|++|++|..++++ |.|++ +|+++.||+||+|+|+..+.+++. +.++....+++..+++.+ .++++.++.
T Consensus 226 -g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~ 303 (453)
T 2yg5_A 226 -GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYET 303 (453)
T ss_dssp -GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESS
T ss_pred -CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECC
Confidence 7899999999999999888 88887 677899999999999998888763 445666778888898877 667788888
Q ss_pred CCCCCCCC--------Cceeeeecc-cCCC-ceEEEEeccc-----cCCCCCC--CCce---EEe-cCCC-CCCcc-cee
Q 038410 302 NFMPQNPA--------AWSAWNFVG-STNG-KICLTYCLNV-----LQNIGET--SMPF---LAT-LNPD-RTPQN-TLL 358 (850)
Q Consensus 302 ~~~p~~~~--------~~~s~~~~~-~~~~-~~~~~~~~~~-----l~~l~~~--~~~~---~~~-l~~~-~~~~~-~~~ 358 (850)
++|+.... .+..+.+.. .+++ ...+..+... +..+.+. ...+ +.. +++. ..|.. ...
T Consensus 304 ~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~p~~~~~~ 383 (453)
T 2yg5_A 304 PFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEEPVVYYES 383 (453)
T ss_dssp CGGGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGGCCSEEEEC
T ss_pred CCCCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCCCccEEEEe
Confidence 77653210 011122222 2332 3445444421 1111110 0001 111 1111 12222 334
Q ss_pred eEEe---c----cCCCChHHHHHHHHhhhhcCCCCeEEEcccc---CCCCCcchhhHHHHHHHHhcc
Q 038410 359 KWST---G----HSVPSVAASKASLELHLIQGKRGIWYSGVDQ---GYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 359 ~w~~---~----~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~---g~G~~e~A~~sG~~aA~~ilg 415 (850)
+|.. . .|.+.++...... ....++.+||||||+++ +.|.+++|+.||+++|++|+.
T Consensus 384 ~W~~~~~~~G~~~~~~~~g~~~~~~-~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 384 DWGSEEWTRGCYAASFDLGGLHRYG-ADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIA 449 (453)
T ss_dssp CTTTCTTTCSSSCEEECTTHHHHHG-GGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCCcCcCCCCccccch-HHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHH
Confidence 6642 1 1234444332211 11135678999999976 556669999999999999964
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.96 E-value=1.8e-29 Score=290.37 Aligned_cols=284 Identities=15% Similarity=0.162 Sum_probs=151.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCccc---
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGT--- 77 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~--- 77 (850)
|+|||||||++||+||++|+++|++|+|||+++++||+++|.+.+|+.+|.|++++. ....+.++++.+|.....
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~--~~~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVIT--DPSAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBS--CTHHHHHHHHTTTCCGGGTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeec--CchhHHHHHHHhcchhhhcee
Confidence 799999999999999999999999999999999999999999999999999999984 233455788888755332
Q ss_pred ---ccceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCC---------
Q 038410 78 ---SDMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRN--------- 145 (850)
Q Consensus 78 ---~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 145 (850)
....+.+.+.+|+.+.+.. ............ .+.- ...+.++..................+.
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~-~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVFNYDN--DQTRLEAQIQQF-NPRD---VEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRA 153 (501)
T ss_dssp EEEESSSEEEEETTSCEEEECS--CHHHHHHHHHHH-CTHH---HHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHS
T ss_pred eEecCcceEEEcCCCCEEEeec--cHHHHHHHHhhc-Cccc---cchhhhHHHHHHHhhhhhhhhccccccchhhhhhhh
Confidence 2233445556676655433 111111111111 1111 111111111111111110000000011
Q ss_pred ----------CcHHHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHH
Q 038410 146 ----------ETLGHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQI 215 (850)
Q Consensus 146 ----------~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~ 215 (850)
.++.+++.+.-.++.+ ..++. .....++.++.... +...++.++ ....+.++++||+++++
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~l-~~~l~-~~~~~~g~~p~~~~--~~~~~~~~~-----~~~~G~~~p~GG~~~l~ 224 (501)
T 4dgk_A 154 APQLAKLQAWRSVYSKVASYIEDEHL-RQAFS-FHSLLVGGNPFATS--SIYTLIHAL-----EREWGVWFPRGGTGALV 224 (501)
T ss_dssp GGGTTTSHHHHHHHHHHHTTCCCHHH-HHHHH-HHHHHHHSCC--CC--CTHHHHHHH-----HSCCCEEEETTHHHHHH
T ss_pred hhhhhhhhhcccHHHHHHHHhccHHH-Hhhhh-hhhcccCCCcchhh--hhhhhhhhh-----hccCCeEEeCCCCcchH
Confidence 2344445444223332 22221 11122333333321 111222111 22345678999999999
Q ss_pred HHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChHHHH-HhhcCCC-ChHHHHhhcCcceee
Q 038410 216 DKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAPDAL-RILGNQA-TFDETRILGAFRYVY 292 (850)
Q Consensus 216 ~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~~~~-~ll~~~~-~~~~~~~l~~i~~~~ 292 (850)
++|++.++++|++|++|++|++|..+++++ .|++++|+++.||+||++++++.+. .|++..+ +....+.+...++..
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 304 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSN 304 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CC
T ss_pred HHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCC
Confidence 999999999999999999999999999997 4899999999999999999877665 4554422 223344555555555
Q ss_pred --cEEEEecCC
Q 038410 293 --RDVFLHRDK 301 (850)
Q Consensus 293 --~~v~l~~d~ 301 (850)
..+++..+.
T Consensus 305 s~~~~~~~l~~ 315 (501)
T 4dgk_A 305 SLFVLYFGLNH 315 (501)
T ss_dssp EEEEEEEEESS
T ss_pred ceeEEEecccC
Confidence 333444444
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=2.2e-28 Score=277.89 Aligned_cols=388 Identities=14% Similarity=0.164 Sum_probs=252.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCcceEE-eeCCeeeecceeeccCCCchHHHHHHHHcCCCcccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG-VEVVLYEKEDSLGGHAKTV-TIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTS 78 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~-~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~ 78 (850)
+||+|||||++||+||++|+++| .+|+|+|+++++||++++. ..+|+.+|.|++.+. ..++.+.+++++++ +....
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~-~~~~~~~~l~~~~~-~~~~~ 87 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIF-SHYQYFDDVMDWAV-QGWNV 87 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBC-CSBHHHHHHHHHHC-SCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccc-cChHHHHHHHHHHh-hhhhh
Confidence 48999999999999999999998 7999999999999999996 568999999999985 47788889999975 22111
Q ss_pred cceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCCC
Q 038410 79 DMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGYS 158 (850)
Q Consensus 79 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 158 (850)
.......+.+|+.+.++....+.. +........+..+.+. . .. ....++.++++|+.++ ++
T Consensus 88 ~~~~~~~~~~g~~~~~P~~~~~~~-------l~~~~~~~~~~~ll~~--------~--~~-~~~~~~~s~~e~~~~~-~g 148 (484)
T 4dsg_A 88 LQRESWVWVRGRWVPYPFQNNIHR-------LPEQDRKRCLDELVRS--------H--AR-TYTEPPNNFEESFTRQ-FG 148 (484)
T ss_dssp EECCCEEEETTEEEESSGGGCGGG-------SCHHHHHHHHHHHHHH--------H--HC-CCSSCCSSHHHHHHHH-HH
T ss_pred ccCceEEEECCEEEEeCccchhhh-------CCHHHHHHHHHHHHHH--------H--hc-cCCCCCCCHHHHHHHH-hH
Confidence 111122334555555442111111 1011111222222211 0 01 1223578999999988 88
Q ss_pred HHHHHHHHhhhhcccccCCcchhccC------CHHHHHHHHH-Hhhhc------CCCcEEE-ecCChHHHHHHHHHHhhc
Q 038410 159 ELFLKAYLIPICSSVWSCPSDGAMRF------SAFSVLSFCR-LFQLF------GHPQCVT-VRRHSHSQIDKVSEQLKS 224 (850)
Q Consensus 159 ~~~~~~~~~p~~~~~~~~~~~~~~~~------~a~~~~~~~~-~~~~~------~~~~~~~-~~gG~~~l~~~L~~~l~~ 224 (850)
..+.+.++.|++.++|+.++++++.. +...+..++. .+... ....+.+ .+||+++++++|++.+.+
T Consensus 149 ~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~ 228 (484)
T 4dsg_A 149 EGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPS 228 (484)
T ss_dssp HHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCG
T ss_pred HHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhh
Confidence 88889999999999999999998642 2111112222 11111 1223344 459999999999999964
Q ss_pred cCceEeeC--CceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcC---CCChHHHHhhcCcceeec-EEEEe
Q 038410 225 WGIQIRMS--CEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGN---QATFDETRILGAFRYVYR-DVFLH 298 (850)
Q Consensus 225 ~G~~i~~~--~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~---~~~~~~~~~l~~i~~~~~-~v~l~ 298 (850)
.+|+++ ++|++|+.++++|+ +.+|+++.||+||+|+|++.+.+++.+ ..++...+.+..++|.+. .+.+.
T Consensus 229 --~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~ 304 (484)
T 4dsg_A 229 --EKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIG 304 (484)
T ss_dssp --GGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEE
T ss_pred --CeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEE
Confidence 289999 56999999887654 578888999999999999999999854 256667888999999984 44466
Q ss_pred cCCC-----------CCCCCCCCc------eeeeecccCCCceEEEEecc--ccCCCCCC-----CCceEEecCCCCC--
Q 038410 299 RDKN-----------FMPQNPAAW------SAWNFVGSTNGKICLTYCLN--VLQNIGET-----SMPFLATLNPDRT-- 352 (850)
Q Consensus 299 ~d~~-----------~~p~~~~~~------~s~~~~~~~~~~~~~~~~~~--~l~~l~~~-----~~~~~~~l~~~~~-- 352 (850)
++.. ++|+....+ +.+.-...|++...+..... ....+.+. ..+.+..+....+
T Consensus 305 ~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~~~ 384 (484)
T 4dsg_A 305 VKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLLPED 384 (484)
T ss_dssp EESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCCTTC
T ss_pred EcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCCccc
Confidence 6543 123322111 11111112455544433222 11111111 0001111221111
Q ss_pred Ccc--ceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEEEccccCCCC----CcchhhHHHHHHHHhc
Q 038410 353 PQN--TLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWYSGVDQGYGF----PEDGLKVGMIAAHGVL 414 (850)
Q Consensus 353 ~~~--~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~aG~~~g~G~----~e~A~~sG~~aA~~il 414 (850)
+.. .+.+|.+++|+|++++.+....+.. +... ||+++|.+..+-+ +++|+.||+.+|+.|+
T Consensus 385 ~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 385 LLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp CEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 111 3569999999999999988888777 4445 9999999653222 3899999999999998
No 20
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.95 E-value=1.2e-27 Score=256.83 Aligned_cols=252 Identities=17% Similarity=0.264 Sum_probs=208.9
Q ss_pred cCchHHHHHhh-hhccCCChHHHHHhcCCC-cceeecccCCCCCCHHHHHHHHHHHHHHHcC-CCCCCeEEEEccCccHH
Q 038410 553 KNTLAQARRNI-SHHYDVSNELFSLFLGKS-MMYSCAIFKSEYEDLDVAQMRKVSLLIEKAR-VNKGLDVLEIGCGWGTL 629 (850)
Q Consensus 553 ~~~~~~~~~~i-~~~Yd~~~~~~~~~l~~~-~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~ 629 (850)
.|...++++++ .+|||.+++++..+.++. +.|++++|.. ..++.+ ...+.+++.+. ++++.+|||||||+|.+
T Consensus 56 ~~~~~g~~~~i~~~~y~~~~~~~~~~~~~~~~~y~~~~f~~-~~~~~~---~~~~~l~~~l~~~~~~~~vLDiGcG~G~~ 131 (312)
T 3vc1_A 56 VNLRLGDVDGLYHHHYGIGPVDRAALGDPEHSEYEKKVIAE-LHRLES---AQAEFLMDHLGQAGPDDTLVDAGCGRGGS 131 (312)
T ss_dssp HHHHHHTTTTCCCCSCCCSCCCHHHHCCTTSTTHHHHHHHH-HHHHHH---HHHHHHHTTSCCCCTTCEEEEESCTTSHH
T ss_pred chhhcccccchhhhhcCCchhHHHhhcCCCccccchHHHhh-hhhHHH---HHHHHHHHHhccCCCCCEEEEecCCCCHH
Confidence 35567788888 899999999999999988 9999999975 223444 44467888887 89999999999999999
Q ss_pred HHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHH
Q 038410 630 AIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCE 708 (850)
Q Consensus 630 ~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~ 708 (850)
+..++++.+++|+|+|+|+++++.|+++++..++.++++++++|+.+++ ++++||+|++..+++|++ +..+++++.
T Consensus 132 ~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~ 208 (312)
T 3vc1_A 132 MVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHS 208 (312)
T ss_dssp HHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHH
Confidence 9999998789999999999999999999999999889999999999988 668999999999999994 799999999
Q ss_pred hccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHHHHH
Q 038410 709 SLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNL 788 (850)
Q Consensus 709 r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~ 788 (850)
++|||||++++.+....... ........++..+.++ .+++..++.+.+++ +||+++++++++ ..++..|..+|
T Consensus 209 ~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~s~~~~~~~l~~-aGf~~~~~~~~~---~~~~~~w~~~~ 281 (312)
T 3vc1_A 209 RFLKVGGRYVTITGCWNPRY-GQPSKWVSQINAHFEC--NIHSRREYLRAMAD-NRLVPHTIVDLT---PDTLPYWELRA 281 (312)
T ss_dssp HHEEEEEEEEEEEEEECTTT-CSCCHHHHHHHHHHTC--CCCBHHHHHHHHHT-TTEEEEEEEECH---HHHHHHHHHHT
T ss_pred HHcCCCcEEEEEEccccccc-cchhHHHHHHHhhhcC--CCCCHHHHHHHHHH-CCCEEEEEEeCC---HHHHHHHHHHH
Confidence 99999999999887654422 1222233344444444 37889999888875 799999999887 47899999999
Q ss_pred HhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEe
Q 038410 789 MEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSR 833 (850)
Q Consensus 789 ~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~ 833 (850)
... ...|+++.|.+ .|+.|.++++.|+++|
T Consensus 282 ~~~----~~~g~~~~~~~-----------~~~~~~~~y~~i~a~k 311 (312)
T 3vc1_A 282 TSS----LVTGIEKAFIE-----------SYRDGSFQYVLIAADR 311 (312)
T ss_dssp TST----TCCSCHHHHHH-----------HHHHTSEEEEEEEEEE
T ss_pred HHh----hhhcChHHHHH-----------HHHhcCCcEEEEEEee
Confidence 866 24577877766 5667899999999887
No 21
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.94 E-value=2.9e-27 Score=260.44 Aligned_cols=351 Identities=12% Similarity=0.081 Sum_probs=228.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEee--CCeee-ecceeeccCCCchHHHHHHHHcCCCccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTI--DGVDL-DIGFMLFNHVEYPNMMEFLESLGVDMGT 77 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~--~G~~~-d~G~~~~~~~~~~~~~~l~~~lgl~~~~ 77 (850)
+||+|||||++||+||+.|+++|++|+|+|+++++||++.|... .|+.+ +.|++++. ..++++.++++++|... .
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~-~~~~~~~~~~~~l~~~~-~ 81 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFH-TDNETVWNYVNKHAEMM-P 81 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEE-ESCHHHHHHHHTTSCEE-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEEC-CCCHHHHHHHHHHhhhc-c
Confidence 48999999999999999999999999999999999999999988 78876 89999995 57899999999998622 1
Q ss_pred ccceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCC
Q 038410 78 SDMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGY 157 (850)
Q Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (850)
..... ....+|+.+.++. ++..+.........+. + ....+....... ..++.++.+|+.+. +
T Consensus 82 ~~~~~-~~~~~g~~~~~P~--~~~~~~~l~~~~~~~~------~-------~~~~l~~~~~~~-~~~~~sl~e~~~~~-~ 143 (384)
T 2bi7_A 82 YVNRV-KATVNGQVFSLPI--NLHTINQFFSKTCSPD------E-------ARALIAEKGDST-IADPQTFEEEALRF-I 143 (384)
T ss_dssp CCCCE-EEEETTEEEEESC--CHHHHHHHTTCCCCHH------H-------HHHHHHHHSCCS-CSSCCBHHHHHHHH-H
T ss_pred cccce-EEEECCEEEECCC--ChhHHHHHhcccCCHH------H-------HHHHHHHhhhcc-CCCCcCHHHHHHHh-h
Confidence 11111 2233455444432 1111110000000111 0 111111111111 23578999999988 8
Q ss_pred CHHHHHHHHhhhhcccccCCcchhccCCHHHHHHH-HHHhhhcCCCcEE-EecCChHHHHHHHHHHhhccCceEeeCCce
Q 038410 158 SELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSF-CRLFQLFGHPQCV-TVRRHSHSQIDKVSEQLKSWGIQIRMSCEV 235 (850)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V 235 (850)
++.+.+.++.|++.++|+.++++++...... +.. .........+.+. +++||+++++++|++.. |++|++|++|
T Consensus 144 g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r-~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~---g~~I~l~~~V 219 (384)
T 2bi7_A 144 GKELYEAFFKGYTIKQWGMQPSELPASILKR-LPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHE---NIKVDLQREF 219 (384)
T ss_dssp CHHHHHHHTHHHHHHHHSSCGGGSBGGGCCS-CCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCST---TEEEEESCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCHHHhCHHHHhc-cccccccccccccccccEEECcCHHHHHHHHHhcC---CCEEEECCee
Confidence 8999999999999999999999985322100 000 0000111123454 99999999999998743 8899999999
Q ss_pred E-EEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecEEE-EecCCCCCCCCCCCcee
Q 038410 236 Y-SVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRDVF-LHRDKNFMPQNPAAWSA 313 (850)
Q Consensus 236 ~-~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~v~-l~~d~~~~p~~~~~~~s 313 (850)
+ +|.. .||+||+|+|++.+.++ .++.++|.++.++ +.+|+.+.+ .+
T Consensus 220 ~~~i~~---------------~~d~VI~a~p~~~~~~~-----------~lg~l~y~s~~~v~~~~d~~~~~------~~ 267 (384)
T 2bi7_A 220 IVEERT---------------HYDHVFYSGPLDAFYGY-----------QYGRLGYRTLDFKKFTYQGDYQG------CA 267 (384)
T ss_dssp CGGGGG---------------GSSEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEEESCSSS------SS
T ss_pred ehhhhc---------------cCCEEEEcCCHHHHHHh-----------hcCCCCcceEEEEEEEeCCCCCC------CE
Confidence 9 8853 29999999999987665 3568999996654 444532211 23
Q ss_pred e-eecccCCCceEEEEeccccCCCCCCCCceEEecCCCCCCccceeeEE----eccCCCChHHHHHHHHhhhhcCC-CCe
Q 038410 314 W-NFVGSTNGKICLTYCLNVLQNIGETSMPFLATLNPDRTPQNTLLKWS----TGHSVPSVAASKASLELHLIQGK-RGI 387 (850)
Q Consensus 314 ~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~w~----~~~p~~~~~~~~~~~~l~~~~~~-~~l 387 (850)
| +|.........++.+.+-...+. . ...+.++.. ...|. ..||+++.++.+...++.++... +||
T Consensus 268 ~~n~~~~~~~~~ri~~~~~~~~~~~-~-~~~~v~~e~-------~~~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~ 338 (384)
T 2bi7_A 268 VMNYCSVDVPYTRITEHKYFSPWEQ-H-DGSVCYKEY-------SRACEENDIPYYPIRQMGEMALLEKYLSLAENETNI 338 (384)
T ss_dssp EEEECSTTSSSSEEEEGGGGCTTSC-C-SEEEEEEEE-------EEECCTTCCCCEECCCHHHHHHHHHHHHHHTTCSSE
T ss_pred EEEecCCCCCeeeEEEeeccCCCCC-C-CCEEEEEEE-------eccccCCCccccccCChhHHHHHHHHHHHHhcCCCE
Confidence 4 56532211122333322212222 1 112222211 11342 45889999999999888886554 899
Q ss_pred EEEccccC--CCCCcchhhHHHHHHHHhccc
Q 038410 388 WYSGVDQG--YGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 388 ~~aG~~~g--~G~~e~A~~sG~~aA~~ilg~ 416 (850)
+|||.|.+ ++.||+|+.||+.+|+.+++.
T Consensus 339 ~~~Gr~~~~~~~~~~d~i~sa~~~a~~~~~~ 369 (384)
T 2bi7_A 339 TFVGRLGTYRYLDMDVTIAEALKTAEVYLNS 369 (384)
T ss_dssp EECHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEccccEEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 99998643 445599999999999999753
No 22
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.94 E-value=1.8e-27 Score=260.69 Aligned_cols=358 Identities=12% Similarity=0.092 Sum_probs=229.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeee-cceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLD-IGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d-~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
+||+|||||++||+||+.|+++|++|+|+|+++++||++.+....|+.++ .|++++. ..++.++++++++|.......
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~-~~~~~~~~~~~~l~~~~~~~~ 80 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFH-TNDKYIWDYVNDLVEFNRFTN 80 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEE-ESCHHHHHHHHTTSCBCCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceec-CCCHHHHHHHHHhhhhhhccc
Confidence 48999999999999999999999999999999999999999998999995 9999985 457889999998886432222
Q ss_pred ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCCCH
Q 038410 80 MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGYSE 159 (850)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 159 (850)
.. ....+|+.+.++. ++..+..... ...+ .+ ...++..........++.++++|+.+. +++
T Consensus 81 ~~--~~~~~g~~~~~p~--~~~~~~~l~~-~~~~------~~-------~~~~l~~~~~~~~~~~~~s~~~~~~~~-~g~ 141 (367)
T 1i8t_A 81 SP--LAIYKDKLFNLPF--NMNTFHQMWG-VKDP------QE-------AQNIINAQKKKYGDKVPENLEEQAISL-VGE 141 (367)
T ss_dssp CC--EEEETTEEEESSB--SHHHHHHHHC-CCCH------HH-------HHHHHHHHTTTTCCCCCCSHHHHHHHH-HHH
T ss_pred cc--eEEECCeEEEcCC--CHHHHHHHhc-cCCH------HH-------HHHHHHHHhhccCCCCCccHHHHHHHH-HhH
Confidence 21 2233455544432 1111110000 0001 01 111222211111223578999999988 888
Q ss_pred HHHHHHHhhhhcccccCCcchhccCCHHHHHHHHH-HhhhcCCCcEE-EecCChHHHHHHHHHHhhccCceEeeCCceEE
Q 038410 160 LFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCR-LFQLFGHPQCV-TVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYS 237 (850)
Q Consensus 160 ~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~ 237 (850)
.+.+.++.|++.++|+.++++++...... +.... .......+.+. +++||+++++++|++ |++|++|++|++
T Consensus 142 ~~~~~~~~p~~~~~~~~~~~~lsa~~~~~-l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~ 215 (367)
T 1i8t_A 142 DLYQALIKGYTEKQWGRSAKELPAFIIKR-IPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLK 215 (367)
T ss_dssp HHHHHHTHHHHHHHHSSCGGGSCTTSSCC-CCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGG
T ss_pred HHHHHHHHHHHhhhhCCChHHcCHHHHhh-ceeeeccccccccchhhcccCCCHHHHHHHHhc-----CCEEEeCCceee
Confidence 99999999999999999999985432200 00000 00011134453 899999999999987 579999999998
Q ss_pred EEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecEEE-EecCCCCCCCCCCCceeeee
Q 038410 238 VFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRDVF-LHRDKNFMPQNPAAWSAWNF 316 (850)
Q Consensus 238 I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~v~-l~~d~~~~p~~~~~~~s~~~ 316 (850)
|.. +| .+.||+||+|+|++.+.++ .++.++|.+..++ +.+|.+.+|. ..| +++
T Consensus 216 i~~---~v--------~~~~D~VV~a~p~~~~~~~-----------~l~~l~y~s~~~v~~~~d~~~~~~--~~~--~~~ 269 (367)
T 1i8t_A 216 DKD---SL--------ASKAHRIIYTGPIDQYFDY-----------RFGALEYRSLKFETERHEFPNFQG--NAV--INF 269 (367)
T ss_dssp SHH---HH--------HTTEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSSS--SSE--EEE
T ss_pred ech---hh--------hccCCEEEEeccHHHHHHH-----------hhCCCCCceEEEEEEEeccccCCC--CeE--EEe
Confidence 863 12 2469999999999876543 3678999997666 4467766653 222 344
Q ss_pred cccCCCceEEEEeccccCCCCCCCCceEEecCCCCCCccceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEEEccc--
Q 038410 317 VGSTNGKICLTYCLNVLQNIGETSMPFLATLNPDRTPQNTLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWYSGVD-- 393 (850)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~aG~~-- 393 (850)
.........++.+.+-... .. ...+.+++.... ........+|+++..+.+...++.+ +++.+|++|||.|
T Consensus 270 ~~~~~~~~ri~~~~~~~~~-~~--~~~~v~~e~~~~---~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~ 343 (367)
T 1i8t_A 270 TDANVPYTRIIEHKHFDYV-ET--KHTVVTKEYPLE---WKVGDEPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAE 343 (367)
T ss_dssp CCTTSSCSEEEEGGGGSCC-CC--SCEEEEEEEEEE---CCTTSCCCEECCSHHHHHHHHHHHHHHHHCTTEEECSTTTT
T ss_pred CCCCCceeeEEeecccCCC-CC--CCEEEEEEEecc---cCCCCeeecccCChhHHHHHHHHHHHHhcCCCEEEccccee
Confidence 4211111222322221111 11 112222221100 0001234688888888888888877 5667899999986
Q ss_pred cCCCCCcchhhHHHHHHHHhccc
Q 038410 394 QGYGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 394 ~g~G~~e~A~~sG~~aA~~ilg~ 416 (850)
.+++.||+|+.||+.+|+.++..
T Consensus 344 ~~y~~~~d~i~sa~~~a~~~~~~ 366 (367)
T 1i8t_A 344 YKYYDMHQVISAALYQVKNIMST 366 (367)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHSC
T ss_pred eEecCHHHHHHHHHHHHHHHhcc
Confidence 34445599999999999998653
No 23
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.94 E-value=8.3e-27 Score=262.81 Aligned_cols=386 Identities=16% Similarity=0.181 Sum_probs=237.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeC---CeeeecceeeccCCCchHHHHHHHHcCCCccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTID---GVDLDIGFMLFNHVEYPNMMEFLESLGVDMGT 77 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~---G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~ 77 (850)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.... |..++.|++++....++.+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 389999999999999999999999999999999999999998887 99999999998544388899999999998655
Q ss_pred ccceeeEEe--cCCCccccCCCCCCchhhHHhhhccChHHHHHH-HHHHhhhHHHHHHHHhhcCC-----CC-CCCCCcH
Q 038410 78 SDMSFSVSL--DKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQML-REMMKFKDDVLSYVEELENS-----PD-IDRNETL 148 (850)
Q Consensus 78 ~~~~~~~~~--~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~s~ 148 (850)
......... .+++.... . .. .......+ ....++.. ........ +. ...+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~--~~-----------~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~d~s~ 143 (431)
T 3k7m_X 82 ASEFTSFRHRLGPTAVDQA-F--PI-----------PGSEAVAVEAATYTLLR----DAHRIDLEKGLENQDLEDLDIPL 143 (431)
T ss_dssp CCCCCEECCBSCTTCCSSS-S--CC-----------CGGGHHHHHHHHHHHHH----HHTTCCTTTCTTSSSCGGGCSBH
T ss_pred cCCCCcEEEEecCCeecCC-C--CC-----------CHHHHHHHHHHHHHHHH----HHHhcCCCCCccCcchhhhcCCH
Confidence 443322222 11111100 0 00 00000111 11111111 11000000 00 0113788
Q ss_pred HHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhh----h-cCCCcEEEecCChHHHHHHHHHHhh
Q 038410 149 GHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQ----L-FGHPQCVTVRRHSHSQIDKVSEQLK 223 (850)
Q Consensus 149 ~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~----~-~~~~~~~~~~gG~~~l~~~L~~~l~ 223 (850)
.+|+...+..+.. ..++.++....++.++.++ +...++.++.... . ...... .+.+|+..+++++++.+
T Consensus 144 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~~~~- 217 (431)
T 3k7m_X 144 NEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQA---SALWMLQLVAAHHYSILGVVLSLDE-VFSNGSADLVDAMSQEI- 217 (431)
T ss_dssp HHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTHHHHHHHHTTC-
T ss_pred HHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhh---hHHHHHHHHHhcCCccceeecchhh-hcCCcHHHHHHHHHhhC-
Confidence 9999988776664 4456677777888877766 5655555544110 0 112233 78999999999888765
Q ss_pred ccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhh-cCCCChHHHHhhcCcceee-cEEEEecCC
Q 038410 224 SWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRIL-GNQATFDETRILGAFRYVY-RDVFLHRDK 301 (850)
Q Consensus 224 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~i~~~~-~~v~l~~d~ 301 (850)
| +|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.++. .++++....+++..+.+.. .++.+.+++
T Consensus 218 --g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~ 294 (431)
T 3k7m_X 218 --P-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRG 294 (431)
T ss_dssp --S-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEES
T ss_pred --C-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECC
Confidence 6 9999999999999999999999999889999999999999888774 4446666777777777766 666677766
Q ss_pred CCCC---CCCCCcee-eeecccCCCceEEEEeccccCCCCCC----CCceEEecCCCCCCcc-ceeeEEe------ccCC
Q 038410 302 NFMP---QNPAAWSA-WNFVGSTNGKICLTYCLNVLQNIGET----SMPFLATLNPDRTPQN-TLLKWST------GHSV 366 (850)
Q Consensus 302 ~~~p---~~~~~~~s-~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~~~~l~~~~~~~~-~~~~w~~------~~p~ 366 (850)
++.. ........ +.+.....+..++..+...-. +... ..+.+..+.+...+.. ...+|.. +++.
T Consensus 295 ~~~~i~~~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~W~~d~~~~G~~~~ 373 (431)
T 3k7m_X 295 AEAGIECVGDGIFPTLYDYCEVSESERLLVAFTDSGS-FDPTDIGAVKDAVLYYLPEVEVLGIDYHDWIADPLFEGPWVA 373 (431)
T ss_dssp CCTTEEEEBSSSSSEEEEEEECSSSEEEEEEEEETTT-CCTTCHHHHHHHHHHHCTTCEEEEEECCCTTTCTTTSSSSCC
T ss_pred CCcCceEcCCCCEEEEEeCcCCCCCCeEEEEEecccc-CCCCCHHHHHHHHHHhcCCCCccEeEecccCCCCCCCCCCCC
Confidence 5411 00000000 111111133344444432111 1111 1112222333222222 2346632 3333
Q ss_pred CChHHHHH-HHHhhhhcCCCCeEEEcccc---CCCCCcchhhHHHHHHHHhccc
Q 038410 367 PSVAASKA-SLELHLIQGKRGIWYSGVDQ---GYGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 367 ~~~~~~~~-~~~l~~~~~~~~l~~aG~~~---g~G~~e~A~~sG~~aA~~ilg~ 416 (850)
+.++.... .+.+ .++.++|||||+.+ .+|++++|+.||+++|++|+..
T Consensus 374 ~~~g~~~~~~~~l--~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 374 PRVGQFSRVHKEL--GEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp CCTTTTTTSSGGG--GSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCcccHHHH--hCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 33432111 1122 24678999999743 5788899999999999999754
No 24
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.8e-28 Score=267.88 Aligned_cols=361 Identities=12% Similarity=0.098 Sum_probs=223.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC-CCeEEEEecCCCCCCcceEEee--CCeee-ecceeeccCCCchHHHHHHHHcCCCcc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKA-GVEVVLYEKEDSLGGHAKTVTI--DGVDL-DIGFMLFNHVEYPNMMEFLESLGVDMG 76 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~-G~~V~VlEa~~~~GG~~~s~~~--~G~~~-d~G~~~~~~~~~~~~~~l~~~lgl~~~ 76 (850)
+||+|||||++||+||+.|+++ |++|+|+|+++++||++.|... +|+.+ +.|++++. ..++.++++++++|+-..
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~-~~~~~~~~~~~~~g~~~~ 86 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFH-TSNKRVWDYVRQFTDFTD 86 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEE-ESCHHHHHHHTTTCCBCC
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEc-CCcHHHHHHHHHhhhhhc
Confidence 4899999999999999999999 9999999999999999999988 78888 59999985 568999999999997321
Q ss_pred cccceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcC
Q 038410 77 TSDMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRG 156 (850)
Q Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (850)
... ......+|+.+.++. .+..+.........+.. +... ........ ...++.++.+|+.+.
T Consensus 87 -~~~-~~~~~~~G~~~~~p~--~~~~~~~l~~~~~~~~~---~~~~------l~~~~~~~----~~~~~~s~~e~l~~~- 148 (399)
T 1v0j_A 87 -YRH-RVFAMHNGQAYQFPM--GLGLVSQFFGKYFTPEQ---ARQL------IAEQAAEI----DTADAQNLEEKAISL- 148 (399)
T ss_dssp -CCC-CEEEEETTEEEEESS--SHHHHHHHHTSCCCHHH---HHHH------HHHHGGGS----CTTC----CCHHHHH-
T ss_pred -ccc-ceEEEECCEEEeCCC--CHHHHHHHhcccCCHHH---HHHH------HHHHhhcc----CCCCcccHHHHHHHH-
Confidence 111 122334555544432 11011000000001111 1100 00111111 122578999999986
Q ss_pred CCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHh---hhcCCCcEE-EecCChHHHHHHHHHHhhccCceEeeC
Q 038410 157 YSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLF---QLFGHPQCV-TVRRHSHSQIDKVSEQLKSWGIQIRMS 232 (850)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~ 232 (850)
++..+.+.++.|++.++|+.++++++. ..+..+.... .......+. +++||+++++++|++.+ |++|++|
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~ls~---~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~---g~~I~l~ 222 (399)
T 1v0j_A 149 IGRPLYEAFVKGYTAKQWQTDPKELPA---ANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADH---RIEVRLN 222 (399)
T ss_dssp HCHHHHHHHTHHHHHHHHTSCGGGSCG---GGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCST---TEEEECS
T ss_pred HhHHHHHHHHHHHHHhhcCCChhhcCh---HhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcC---CeEEEEC
Confidence 888889999999999999999998843 2221010000 011122343 88999999999998855 7899999
Q ss_pred CceEEEEecCCceEEEeeCCcEE-eCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecE-EEEecCCCCCCCCCCC
Q 038410 233 CEVYSVFPADEGCSIVCVNGSQE-FYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRD-VFLHRDKNFMPQNPAA 310 (850)
Q Consensus 233 ~~V~~I~~~~~~v~V~~~~G~~i-~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~-v~l~~d~~~~p~~~~~ 310 (850)
++|++|... | + ++ .||+||+|+|++.+.++ .++.++|.+.. +.+.++.+..+ ..
T Consensus 223 ~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~-----------~l~~l~y~s~~~~~~~~~~~~~~---~~ 278 (399)
T 1v0j_A 223 TDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY-----------AEGRLGWRTLDFEVEVLPIGDFQ---GT 278 (399)
T ss_dssp CCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSS---SS
T ss_pred Cchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh-----------hhCCCCcceEEEEEEEEccccCC---CC
Confidence 999999753 2 1 35 79999999999987654 35689998843 34455653221 12
Q ss_pred ceeeeecccCCCceEEEEeccccCCCC-CCCCceEEecCCCCCCccceeeEEeccCCCChHHHHHHHHhhhhc-CC---C
Q 038410 311 WSAWNFVGSTNGKICLTYCLNVLQNIG-ETSMPFLATLNPDRTPQNTLLKWSTGHSVPSVAASKASLELHLIQ-GK---R 385 (850)
Q Consensus 311 ~~s~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~l~~~~-~~---~ 385 (850)
+ .++++........++.+.+-.+.+. .. ...+.++..... ....-...+|+++..+.+.+..+.++. +. +
T Consensus 279 ~-~~~~~~~~~~~~ri~~~~~~~~~~~~~~-~~~~v~~e~~~~---~~~~~~~~ypv~~~~~~~~~~~~~~~~~~~~~~~ 353 (399)
T 1v0j_A 279 A-VMNYNDLDVPYTRIHEFRHFHPERDYPT-DKTVIMREYSRF---AEDDDEPYYPINTEADRALLATYRARAKSETASS 353 (399)
T ss_dssp S-EEEECCTTSSCSEEEEGGGGCTTSCCCS-SCEEEEEEEEEE---CCTTSCCCEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-EEEeCCCCCCcceeEeecCCCCCCcCCC-CCeEEEEeeccc---ccCCCccccccCcHHHHHHHHHHHHHHHhccccC
Confidence 2 3455532111223344433222221 11 122222221100 000112357888888888877777643 34 7
Q ss_pred CeEEEcccc--CCCCCcchhhHHHHHHHHhcc
Q 038410 386 GIWYSGVDQ--GYGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 386 ~l~~aG~~~--g~G~~e~A~~sG~~aA~~ilg 415 (850)
||||||+|. +++.+|+|+.||+.+|++|..
T Consensus 354 ~v~~~G~~~~~~~~~~e~~i~sa~~~a~~l~~ 385 (399)
T 1v0j_A 354 KVLFGGRLGTYQYLDMHMAIASALNMYDNVLA 385 (399)
T ss_dssp CEEECHHHHHTCCCCHHHHHHHHHHHHHHTHH
T ss_pred CEEEccceEEEEecCHHHHHHHHHHHHHHHhh
Confidence 999999863 334569999999999999964
No 25
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.94 E-value=1.1e-26 Score=267.48 Aligned_cols=276 Identities=16% Similarity=0.141 Sum_probs=176.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCcceEEee-CCeeeecceeeccCCCchHHHHHHHHcCCCcccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG-VEVVLYEKEDSLGGHAKTVTI-DGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTS 78 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~~~-~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~ 78 (850)
+||||||||+|||+||+.|+++| ++|+|||+++++||+++|... +|+.+|.|++++.....+.+.+++.++|+.....
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~~~ 88 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDGRT 88 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCcce
Confidence 48999999999999999999999 999999999999999999987 8999999999996544556778887887632111
Q ss_pred cceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhc---
Q 038410 79 DMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSR--- 155 (850)
Q Consensus 79 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~--- 155 (850)
...+.++..+.+...... +. ......+.....++.++... ........++.++.+|+.+.
T Consensus 89 ----~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~s~~~~l~~~l~~ 151 (516)
T 1rsg_A 89 ----RFVFDDDNFIYIDEERGR--VD----HDKELLLEIVDNEMSKFAEL-------EFHQHLGVSDCSFFQLVMKYLLQ 151 (516)
T ss_dssp ----CEECCCCCCEEEETTTEE--CT----TCTTTCHHHHHHHHHHHHHH-------HC-------CCBHHHHHHHHHHH
T ss_pred ----eEEECCCCEEEEcCCCcc--cc----ccHHHHHHHHHHHHHHHHHH-------HhhhccCCCCCCHHHHHHHHHHH
Confidence 112233333322211000 00 00011122222222222111 00100112467888877542
Q ss_pred ---CCCHHHHHHHHhhhh---cccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCceE
Q 038410 156 ---GYSELFLKAYLIPIC---SSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQI 229 (850)
Q Consensus 156 ---~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i 229 (850)
.+.... ..++.++. ...++.+++.+ ++...+ .... ....+++| ++.++++|++.+. +++|
T Consensus 152 ~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~---s~~~~~------~~~~-~~~~~~~g-~~~l~~~l~~~l~--~~~i 217 (516)
T 1rsg_A 152 RRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLL---SAKDTY------FGHQ-GRNAFALN-YDSVVQRIAQSFP--QNWL 217 (516)
T ss_dssp HGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTS---BHHHHC------CCCS-SCCEEESC-HHHHHHHHHTTSC--GGGE
T ss_pred hhcccCHHH-HHHHHHHHHHHHHHhCCChHHC---ChHHHH------hhcc-CcchhhhC-HHHHHHHHHHhCC--CCEE
Confidence 122211 11122221 12233444333 333211 1112 22345677 9999999999886 3689
Q ss_pred eeCCceEEEEec-CCceEEEeeCCcEEeCCEEEEecChHHHHHh------------hcCCCChHHHHhhcCcceee-cEE
Q 038410 230 RMSCEVYSVFPA-DEGCSIVCVNGSQEFYNGCVMAVHAPDALRI------------LGNQATFDETRILGAFRYVY-RDV 295 (850)
Q Consensus 230 ~~~~~V~~I~~~-~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~l------------l~~~~~~~~~~~l~~i~~~~-~~v 295 (850)
++|++|++|..+ +++|.|++.+|++++||+||+|+|+..+... +.++++....++++.++|.+ .++
T Consensus 218 ~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv 297 (516)
T 1rsg_A 218 KLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKV 297 (516)
T ss_dssp ETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEE
T ss_pred EECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEE
Confidence 999999999986 6679999999988999999999999988642 23446777899999999988 788
Q ss_pred EEecCCCCCCCC
Q 038410 296 FLHRDKNFMPQN 307 (850)
Q Consensus 296 ~l~~d~~~~p~~ 307 (850)
++.++.++|+.+
T Consensus 298 ~l~f~~~fW~~~ 309 (516)
T 1rsg_A 298 IFEFEECCWSNE 309 (516)
T ss_dssp EEEESSCCSCCS
T ss_pred EEEeCCCCCCCC
Confidence 899999998764
No 26
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.94 E-value=3.2e-26 Score=260.74 Aligned_cols=390 Identities=14% Similarity=0.199 Sum_probs=228.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-eEEEEecCCCCCCcceEEeeCCeeeecceeeccC---CCchHHHHHHHH-cCCCc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGV-EVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNH---VEYPNMMEFLES-LGVDM 75 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~-~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~---~~~~~~~~l~~~-lgl~~ 75 (850)
+||+|||||++||+||+.|++.|+ +|+|+|+++++||++.+....|+.+|.|++++.. ...+.+.+++++ +|+..
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl~~ 84 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKLRN 84 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCCCE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCCce
Confidence 489999999999999999999999 8999999999999999999999999999999852 345568899999 89876
Q ss_pred ccccce---eeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHH--
Q 038410 76 GTSDMS---FSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGH-- 150 (850)
Q Consensus 76 ~~~~~~---~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-- 150 (850)
...... ..+...+|+.+.. ... .........+..+... ..... . +...++.++.+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~----------~~~-----~~~~~~~~~~~~~~~~---~~~~~-~-~~~~~~~s~~~~~ 144 (472)
T 1b37_A 85 FRSDFDYLAQNVYKEDGGVYDE----------DYV-----QKRIELADSVEEMGEK---LSATL-H-ASGRDDMSILAMQ 144 (472)
T ss_dssp EECCCTTGGGCEECSSSSBCCH----------HHH-----HHHHHHHHHHHHHHHH---HHHTS-C-TTCTTCCBHHHHH
T ss_pred eeccCccccceeEcCCCCCCCH----------HHH-----HHHHHHHHHHHHHHHH---HHHhh-c-cccchhhhHHHHH
Confidence 432211 1112122322111 000 0111111111111111 11111 1 11124455543
Q ss_pred HHhhcCC--CHHHHHHHHhhhhc-ccccCCcchhccCCHHHHHHHHHHhhhcCCCcEE-EecCChHHHHHHHHHHhhcc-
Q 038410 151 FIKSRGY--SELFLKAYLIPICS-SVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCV-TVRRHSHSQIDKVSEQLKSW- 225 (850)
Q Consensus 151 ~l~~~~~--~~~~~~~~~~p~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~- 225 (850)
++.+... .....+.++.++.. ..++.+++.++.........+ .......++ .++||++.++++|++.+.+.
T Consensus 145 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~ 220 (472)
T 1b37_A 145 RLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATF----SDFGDDVYFVADQRGYEAVVYYLAGQYLKTD 220 (472)
T ss_dssp HHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHH----HHHCSEEEEECCTTCTTHHHHHHHHTTSCBC
T ss_pred HHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccccccc----cccCCceeeeecCCcHHHHHHHHHHhccccc
Confidence 5544321 11112333444332 223444443321111000011 111222232 24799999999999998765
Q ss_pred -------CceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhh---cCCCChHHHHhhcCcceee-cE
Q 038410 226 -------GIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRIL---GNQATFDETRILGAFRYVY-RD 294 (850)
Q Consensus 226 -------G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll---~~~~~~~~~~~l~~i~~~~-~~ 294 (850)
|++|++|++|++|+.++++|.|++.+|++++||+||+|+|+..+.+++ .++++....+++..+.+.+ .+
T Consensus 221 ~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~k 300 (472)
T 1b37_A 221 DKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTK 300 (472)
T ss_dssp TTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEE
T ss_pred cccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeE
Confidence 679999999999999999999999999889999999999999988754 3446667788888888887 67
Q ss_pred EEEecCCCCCCCCCC------------Cceeee-ecc-cCCCceEEEEeccc----cCCCCCC-----CCceEEecCCC-
Q 038410 295 VFLHRDKNFMPQNPA------------AWSAWN-FVG-STNGKICLTYCLNV----LQNIGET-----SMPFLATLNPD- 350 (850)
Q Consensus 295 v~l~~d~~~~p~~~~------------~~~s~~-~~~-~~~~~~~~~~~~~~----l~~l~~~-----~~~~~~~l~~~- 350 (850)
+++.++.++|+.... ....|. +.. .++..+++.++.+. +..+.+. ..+.+..+.|.
T Consensus 301 v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~ 380 (472)
T 1b37_A 301 IFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK 380 (472)
T ss_dssp EEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTS
T ss_pred EEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Confidence 889999888865211 001111 111 13333333332211 1222111 01111112111
Q ss_pred --CCCc-cceeeE------EeccCCCChHHHH-HHHHhhhhcCCCCeEEEccccC---CCCCcchhhHHHHHHHHhccc
Q 038410 351 --RTPQ-NTLLKW------STGHSVPSVAASK-ASLELHLIQGKRGIWYSGVDQG---YGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 351 --~~~~-~~~~~w------~~~~p~~~~~~~~-~~~~l~~~~~~~~l~~aG~~~g---~G~~e~A~~sG~~aA~~ilg~ 416 (850)
..+. ....+| ..+++.+.++... ..+.+ .++.++|||||+++. .|.+++|+.||+++|++|+..
T Consensus 381 ~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l--~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~ 457 (472)
T 1b37_A 381 DVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQL--RAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINC 457 (472)
T ss_dssp CCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHH--HCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHH--hccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 1122 233456 2233333333322 11222 356789999999763 556699999999999999754
No 27
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.93 E-value=1.7e-26 Score=264.62 Aligned_cols=286 Identities=16% Similarity=0.154 Sum_probs=174.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEee-----------------CCeeeecceeeccCCCchH
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTI-----------------DGVDLDIGFMLFNHVEYPN 63 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~-----------------~G~~~d~G~~~~~~~~~~~ 63 (850)
+||+|||||++||+||+.|+++|++|+|||+++++||++.|.+. .|..++.|++.+. ..+ .
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~-~ 89 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIP-QSH-I 89 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEE-TTS-T
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcc-cHH-H
Confidence 58999999999999999999999999999999999999988875 5788999998884 344 8
Q ss_pred HHHHHHHcCCCcccccce--eeEEe-cCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCC
Q 038410 64 MMEFLESLGVDMGTSDMS--FSVSL-DKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSP 140 (850)
Q Consensus 64 ~~~l~~~lgl~~~~~~~~--~~~~~-~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (850)
+.++++++|+........ ....+ .++. .|.+ ... ....... .++..+.++.+... .. .......
T Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~-~~~~~~~-----~~~~~~~~l~~~~~---~~-~~~~~~~ 156 (489)
T 2jae_A 90 TLDYCRELGVEIQGFGNQNANTFVNYQSDT--SLSG-QSV-TYRAAKA-----DTFGYMSELLKKAT---DQ-GALDQVL 156 (489)
T ss_dssp HHHHHHHHTCCEEEECCCCTTSEEECCCSS--TTTT-CCE-EHHHHHH-----HHHHHHHHHHHHHH---HH-TTTTTTS
T ss_pred HHHHHHHcCCceEEccccCCCceEEecCCc--ccCC-ccc-cHHHHhh-----hhhccHHHHHHHHH---hc-ccccccc
Confidence 889999999986432211 01111 1110 1111 001 1110000 01111112111110 00 0000000
Q ss_pred CCCCCCcHHHHHhhcCCCHHHHHHHHhhhhcccccCC------------cchhccCCHHHHHHHHHH-hhhcCCCcEEEe
Q 038410 141 DIDRNETLGHFIKSRGYSELFLKAYLIPICSSVWSCP------------SDGAMRFSAFSVLSFCRL-FQLFGHPQCVTV 207 (850)
Q Consensus 141 ~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~------------~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~ 207 (850)
...++.++.+|+.+.+ ....+..+.+.....|..+ +.++..++...+..++.. ........++++
T Consensus 157 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (489)
T 2jae_A 157 SREDKDALSEFLSDFG--DLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTP 234 (489)
T ss_dssp CHHHHHHHHHHHHHHT--TCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEE
T ss_pred chhhHHHHHHHHHHhh--hhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEee
Confidence 0012347777777521 1000000011111111111 001100011111111110 011234578899
Q ss_pred cCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCC---cEEeCCEEEEecChHHHHHhhcCCCChHHHHh
Q 038410 208 RRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNG---SQEFYNGCVMAVHAPDALRILGNQATFDETRI 284 (850)
Q Consensus 208 ~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G---~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~ 284 (850)
+||++.|+++|++.+.+ ++|++|++|++|+.++++|.|++.+| ++++||+||+|+|+..+.++.. ++++...++
T Consensus 235 ~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~-~l~~~~~~~ 311 (489)
T 2jae_A 235 VGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQN-NLPGDVLTA 311 (489)
T ss_dssp TTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEE-CCCHHHHHH
T ss_pred cCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCcc-CCCHHHHHH
Confidence 99999999999999942 78999999999999999999998887 6799999999999998888776 467778889
Q ss_pred hcCcceee-cEEEEecCCCCCCC
Q 038410 285 LGAFRYVY-RDVFLHRDKNFMPQ 306 (850)
Q Consensus 285 l~~i~~~~-~~v~l~~d~~~~p~ 306 (850)
++.++|.+ .++++.++.++|+.
T Consensus 312 l~~~~~~~~~kv~l~~~~~~w~~ 334 (489)
T 2jae_A 312 LKAAKPSSSGKLGIEYSRRWWET 334 (489)
T ss_dssp HHTEECCCEEEEEEEESSCHHHH
T ss_pred HHhCCCccceEEEEEeCCCCccC
Confidence 99999988 66778888877654
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.93 E-value=4.9e-25 Score=231.08 Aligned_cols=220 Identities=19% Similarity=0.227 Sum_probs=184.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
.+..+.+++.+.++++.+|||||||+|.++..++++.+++|+|+|+|+++++.|+++.... ++++++++|+.+++ +
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCC
Confidence 3456788889999999999999999999999999977899999999999999999887543 48999999999988 6
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCC-CCCCCHHHHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPG-GCLPSLNRITSA 758 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~-~~~~~~~~~~~~ 758 (850)
+++||+|++..+++|++.+++..++++++++|||||++++.++..+... .....+.+++.+. ..+++..++.+.
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYADI 192 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHHHH
Confidence 7899999999999999888899999999999999999999988655411 1112223344333 347889999888
Q ss_pred HhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcHHHHHhccCCHHHHHH----HHHHHHHHHHHhccCcceEEEEEEEec
Q 038410 759 MTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQSEILALGFNEKFIRT----WEYYFDYCAAGFKSRTLGNYQIVFSRP 834 (850)
Q Consensus 759 ~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~r~----w~~yl~~~~~~f~~~~~~~~q~~~~~~ 834 (850)
+.+ +||++++.+.++.+|..++..|.+++.+.++++.+. +++...+. |+.|+..|.. |.+....++++||
T Consensus 193 l~~-~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----g~~~w~~~~~~Kp 266 (266)
T 3ujc_A 193 LTA-CNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSKR----KMQRWGYFKATKN 266 (266)
T ss_dssp HHH-TTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHT----TSEEEEEEEEECC
T ss_pred HHH-cCCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHHc----CcccceEEEEeCC
Confidence 876 799999999999999999999999999999998876 66655554 9999988874 6677888888887
No 29
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.93 E-value=1.7e-24 Score=248.55 Aligned_cols=392 Identities=15% Similarity=0.149 Sum_probs=226.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEe--eCCeeeecceeeccCCCchHHHHHHHHcCCCcccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVT--IDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTS 78 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~--~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~ 78 (850)
+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. ..|+.+|.|++++. ...+.+.++++++|+.....
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~g~~~~~~ 112 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLP-EKHRIVREYIRKFDLRLNEF 112 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEE-TTCHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCccccc-chHHHHHHHHHHhCCCceee
Confidence 4899999999999999999999999999999999999999988 46899999999984 56778889999999875322
Q ss_pred cc--eeeEEecCCCccccC----CCCCCch-hhHHhhhccChH-H----HHHHHHHHhhhHHHHHHHHhhcCCCCCCCCC
Q 038410 79 DM--SFSVSLDKGQGYEWG----TRNGLSS-LFAQKKNVLNPY-F----WQMLREMMKFKDDVLSYVEELENSPDIDRNE 146 (850)
Q Consensus 79 ~~--~~~~~~~~g~~~~~~----~~~~l~~-~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (850)
.. ...+...+|...... .+..+.. +........... + ......+..+... ..... .+..
T Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~ 183 (498)
T 2iid_A 113 SQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCS--YILNK-------YDTY 183 (498)
T ss_dssp CSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHH--HHHHH-------HTTS
T ss_pred cccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHH--HHHHH-------hhhh
Confidence 11 001111122111000 0000000 000000000000 0 0001111110000 00000 1457
Q ss_pred cHHHHHhhcC-CCHHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhcc
Q 038410 147 TLGHFIKSRG-YSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSW 225 (850)
Q Consensus 147 s~~~~l~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~ 225 (850)
++.+|+...+ ++....+.+ ..+....... ..+....+..... ......+++++||+++++++|++.+.+
T Consensus 184 s~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~gG~~~l~~~l~~~l~~- 253 (498)
T 2iid_A 184 STKEYLIKEGDLSPGAVDMI-GDLLNEDSGY------YVSFIESLKHDDI--FAYEKRFDEIVDGMDKLPTAMYRDIQD- 253 (498)
T ss_dssp BHHHHHHHTSCCCHHHHHHH-HHHTTCGGGT------TSBHHHHHHHHHH--HTTCCCEEEETTCTTHHHHHHHHHTGG-
T ss_pred hHHHHHHHccCCCHHHHHHH-HHhcCcccch------hHHHHHHHHHHhc--cccCcceEEeCCcHHHHHHHHHHhccc-
Confidence 8999998865 455443322 1111110000 0011111111111 123456789999999999999999953
Q ss_pred CceEeeCCceEEEEecCCceEEEeeCCc----EEeCCEEEEecChHHHHHhh-cCCCChHHHHhhcCcceee-cEEEEec
Q 038410 226 GIQIRMSCEVYSVFPADEGCSIVCVNGS----QEFYNGCVMAVHAPDALRIL-GNQATFDETRILGAFRYVY-RDVFLHR 299 (850)
Q Consensus 226 G~~i~~~~~V~~I~~~~~~v~V~~~~G~----~i~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~i~~~~-~~v~l~~ 299 (850)
+|++|++|++|+.++++|.|++.+|+ +++||+||+|+|+..+.++. .+++++...++++.++|.+ .++++.+
T Consensus 254 --~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~ 331 (498)
T 2iid_A 254 --KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTKIFLTC 331 (498)
T ss_dssp --GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEE
T ss_pred --ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcceeEEEEEe
Confidence 89999999999999999999988775 47999999999999877764 3447777888999999988 7778999
Q ss_pred CCCCCCCCCC--C--c-----eeeeecc--cCCCceEEEEecc-c----cCCCCCC-C-C---ceEEe-cCCCCC-----
Q 038410 300 DKNFMPQNPA--A--W-----SAWNFVG--STNGKICLTYCLN-V----LQNIGET-S-M---PFLAT-LNPDRT----- 352 (850)
Q Consensus 300 d~~~~p~~~~--~--~-----~s~~~~~--~~~~~~~~~~~~~-~----l~~l~~~-~-~---~~~~~-l~~~~~----- 352 (850)
+.++|+.... . + ....++. .|.+..++..+.. . +..+.+. . . +.+.. ++...+
T Consensus 332 ~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~ 411 (498)
T 2iid_A 332 TTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSF 411 (498)
T ss_dssp SSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhh
Confidence 9888864211 0 0 0111211 1444444444432 1 2222211 0 0 01111 121111
Q ss_pred -CccceeeEEe------ccCCCChHHHHH-HHHhhhhcCCCCeEEEcccc--CCCCCcchhhHHHHHHHHhccc
Q 038410 353 -PQNTLLKWST------GHSVPSVAASKA-SLELHLIQGKRGIWYSGVDQ--GYGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 353 -~~~~~~~w~~------~~p~~~~~~~~~-~~~l~~~~~~~~l~~aG~~~--g~G~~e~A~~sG~~aA~~ilg~ 416 (850)
+.....+|.. ++..+.++.... .+.+ .++.++|||||+++ .+|++++|+.||+++|++|+..
T Consensus 412 ~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l--~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~ 483 (498)
T 2iid_A 412 CYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPL--TASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLA 483 (498)
T ss_dssp EEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHH--HCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEecCCCCCCCceeeecCCcchHHHHHHH--hCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 1123446643 111122222221 1122 34678999999976 3577799999999999999764
No 30
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.92 E-value=2.9e-24 Score=254.25 Aligned_cols=382 Identities=14% Similarity=0.159 Sum_probs=218.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEee-CCeeeecceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTI-DGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~-~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
+||+|||||++||+||+.|+++|++|+|+|+++++||+++|... .|+.+|.|+++++......+..+.+++|++.....
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~~~~ 416 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFG 416 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCcccccc
Confidence 48999999999999999999999999999999999999999876 68999999999976666677899999999865543
Q ss_pred ceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHH--------
Q 038410 80 MSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHF-------- 151 (850)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-------- 151 (850)
....+...+|... ....... .......+. ..............+.++.++
T Consensus 417 ~~~~l~~~~g~~~--------~~~~~~~-------~~~~~~~ll-------~~~~~~~~~~~~~~d~sl~~~~~~~~~~~ 474 (776)
T 4gut_A 417 ERCDLIQEGGRIT--------DPTIDKR-------MDFHFNALL-------DVVSEWRKDKTQLQDVPLGEKIEEIYKAF 474 (776)
T ss_dssp SCCCEECTTSCBC--------CHHHHHH-------HHHHHHHHH-------HHHHHHGGGCCGGGCCBHHHHHHHHHHHH
T ss_pred cccceEccCCccc--------chhHHHH-------HHHHHHHHH-------HHHHHHhhcccccccccHHHHHHHHHHHH
Confidence 3323322222210 0000000 000011111 111111111111123344333
Q ss_pred HhhcCCCHHHHH----HHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCc
Q 038410 152 IKSRGYSELFLK----AYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGI 227 (850)
Q Consensus 152 l~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~ 227 (850)
+...+......+ .+..+......+.....++..... . ...+ ....+....+.+|++.++++|++ |+
T Consensus 475 l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~---~-~~~~-~~~~G~~~~~~~G~~~l~~aLa~-----gl 544 (776)
T 4gut_A 475 IKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWD---H-NEFF-AQFAGDHTLLTPGYSVIIEKLAE-----GL 544 (776)
T ss_dssp HHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTT---G-GGGS-CCCCSCEEECTTCTHHHHHHHHT-----TS
T ss_pred HHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhh---h-hhhH-HhcCCCeEEECChHHHHHHHHHh-----CC
Confidence 333222110000 001111111112222221100000 0 0000 01234556788999999999886 56
Q ss_pred eEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHh---hcCCCChHHHHhhcCcceee-cEEEEecCCCC
Q 038410 228 QIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRI---LGNQATFDETRILGAFRYVY-RDVFLHRDKNF 303 (850)
Q Consensus 228 ~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~l---l~~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~ 303 (850)
+|++|++|++|+.++++|.|++.+|+++.||+||+|+|+..+.+. +.++++....+++..+++.+ .++++.++.++
T Consensus 545 ~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~F 624 (776)
T 4gut_A 545 DIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRF 624 (776)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCT
T ss_pred cEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCccc
Confidence 899999999999999999999999988999999999999988752 34456777888999999988 68889999988
Q ss_pred CCCC---CCC------------ceeeeecccCCC--ceEEEEeccc----cCCCCCC-----CCceEE-ecCCCC--CCc
Q 038410 304 MPQN---PAA------------WSAWNFVGSTNG--KICLTYCLNV----LQNIGET-----SMPFLA-TLNPDR--TPQ 354 (850)
Q Consensus 304 ~p~~---~~~------------~~s~~~~~~~~~--~~~~~~~~~~----l~~l~~~-----~~~~~~-~l~~~~--~~~ 354 (850)
|+.. ... +....+...+.+ .+++.+..+. +..+.+. ..+.+. .++... .|.
T Consensus 625 W~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~ 704 (776)
T 4gut_A 625 WDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPT 704 (776)
T ss_dssp THHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCS
T ss_pred ccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcc
Confidence 8532 111 111122222332 2343443331 2222211 001111 122221 232
Q ss_pred c-ceeeEEe------ccCCCChHH-HHHHHHhhhhcCCCCeEEEccccC---CCCCcchhhHHHHHHHHhcc
Q 038410 355 N-TLLKWST------GHSVPSVAA-SKASLELHLIQGKRGIWYSGVDQG---YGFPEDGLKVGMIAAHGVLG 415 (850)
Q Consensus 355 ~-~~~~w~~------~~p~~~~~~-~~~~~~l~~~~~~~~l~~aG~~~g---~G~~e~A~~sG~~aA~~ilg 415 (850)
. ...+|.. ++..+.++. ......+.+ ...++|+|||+++. .|++++|+.||+++|++|++
T Consensus 705 ~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~-p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 705 KYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAE-DIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp EEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHC-CBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred eEEEecCCCCCccCCCCCccCCCCchhHHHHHhC-cCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 2 4446743 111111111 111222221 12478999999774 67779999999999999975
No 31
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.92 E-value=6.9e-25 Score=231.13 Aligned_cols=229 Identities=14% Similarity=0.153 Sum_probs=178.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC--CEEEEEeCCHH------HHHHHHHHHHHcCCC
Q 038410 593 YEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG--CKYTGITLSEE------QLKYTETKVKEAGLQ 664 (850)
Q Consensus 593 ~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~------~~~~a~~~~~~~gl~ 664 (850)
..+++.+|.++...+++.++++++.+|||||||+|.++..++++.+ ++|+|+|+|++ +++.|+++++..++.
T Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~ 100 (275)
T 3bkx_A 21 ARTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG 100 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG
T ss_pred chHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999999999999999999999843 89999999997 999999999988887
Q ss_pred CCEEEEEcc-cC--CCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccc-cc
Q 038410 665 DHIRLYLCD-YR--QMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPG-FI 739 (850)
Q Consensus 665 ~~v~~~~~D-~~--~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~-~~ 739 (850)
++++++++| +. +++ ++++||+|++..+++|+++ ...+++.+.++++|||++++.++..+............ ++
T Consensus 101 ~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 178 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS--ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMI 178 (275)
T ss_dssp GGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC--HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHH
T ss_pred CceEEEECChhhhccCCCCCCCEEEEEEccchhhCCC--HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHH
Confidence 799999998 43 333 5689999999999999965 46678888888888999999998875542211110000 11
Q ss_pred cccc---c---CC--CCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHH--HHHHHHHhcHHHH-Hh-ccCCHHHHHH
Q 038410 740 TEYV---F---PG--GCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLR--CWRTNLMEKQSEI-LA-LGFNEKFIRT 807 (850)
Q Consensus 740 ~~~i---~---p~--~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~--~w~~~~~~~~~~~-~~-~~~~~~~~r~ 807 (850)
+..+ . +. ..+++..++.+.+++ +||+++..+.+ |..|+. .|+.++...+.+. .. .||++.|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~-aGf~~~~~~~~---~~~~~~~~~W~~~~~~~~~~~~~~~~g~~~~~~~~ 254 (275)
T 3bkx_A 179 QGLLYAIAPSDVANIRTLITPDTLAQIAHD-NTWTYTAGTIV---EDPTLDDAHWEIATTNALLTELKLSTDLRDRVKPL 254 (275)
T ss_dssp HHHHHHHSCCTTCSCCCCCCHHHHHHHHHH-HTCEEEECCCB---CCTTCTHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHhhccccccccccccCCHHHHHHHHHH-CCCeeEEEEEe---cCCCCCCchhhHHHHHHHHHHHHhhccccHHHHHH
Confidence 1111 0 11 247899999888876 79999999887 556776 8998666555443 22 4789999999
Q ss_pred HHHHHHHHHHHhccCcceEEEEEEE
Q 038410 808 WEYYFDYCAAGFKSRTLGNYQIVFS 832 (850)
Q Consensus 808 w~~yl~~~~~~f~~~~~~~~q~~~~ 832 (850)
|.. +|+.| .+.++++|++++
T Consensus 255 ~~~---~~~~g--~~~~~~~~~~~~ 274 (275)
T 3bkx_A 255 LEA---MSHNG--TASLATFTGRIT 274 (275)
T ss_dssp HHH---HTTSC--CCCCCEEEEEEE
T ss_pred HHH---HHhcc--ccccceeeEEEe
Confidence 998 56665 669999999875
No 32
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.91 E-value=5.1e-24 Score=223.32 Aligned_cols=209 Identities=14% Similarity=0.169 Sum_probs=166.3
Q ss_pred HHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCC
Q 038410 604 VSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVK 681 (850)
Q Consensus 604 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~ 681 (850)
...+++.+. ++++.+|||||||+|.++..+++.++++|+|+|+|+.+++.|+++++..+++++++++++|+.+++ +++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 345666665 788999999999999999999998677999999999999999999999999889999999999988 678
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+||+|++..+++|++ +..+++++.++|||||++++.+++...... ......++.. .+| .+++..++.+.+.+
T Consensus 114 ~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDER--PAEINDFWMD-AYP--EIDTIPNQVAKIHK 185 (267)
T ss_dssp CEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCC--CHHHHHHHHH-HCT--TCEEHHHHHHHHHH
T ss_pred CEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCC--hHHHHHHHHH-hCC--CCCCHHHHHHHHHH
Confidence 999999999999993 689999999999999999999876432211 1111112211 122 57789999888886
Q ss_pred CCceEEEEeeecC-----CcHHHHHHHHHHHHHhc---HHHHHhc-cCCHHHHHHHHHHHHHHHHHhcc
Q 038410 762 SSRLCVEHLENIG-----IHFYQTLRCWRTNLMEK---QSEILAL-GFNEKFIRTWEYYFDYCAAGFKS 821 (850)
Q Consensus 762 ~~gf~v~~~~~~~-----~~y~~tl~~w~~~~~~~---~~~~~~~-~~~~~~~r~w~~yl~~~~~~f~~ 821 (850)
+||++++++.++ .+|..++..|.+++.+. .+++.++ .......++|+.|+.+|+.+|..
T Consensus 186 -aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~f~~ 253 (267)
T 3kkz_A 186 -AGYLPVATFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEELYHKYKEYYGYTFFI 253 (267)
T ss_dssp -TTEEEEEEEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred -CCCEEEEEEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhccccCeEeeh
Confidence 799999998887 78999999999999653 3343332 22345579999999888777754
No 33
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.91 E-value=7.2e-24 Score=230.85 Aligned_cols=205 Identities=13% Similarity=0.094 Sum_probs=137.7
Q ss_pred CcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcC---CCC
Q 038410 202 PQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGN---QAT 278 (850)
Q Consensus 202 ~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~---~~~ 278 (850)
...+...+|+..++++|++.+ |++|+++++|++|+.++++|.|++.+|+++.||+||+|+|++.+.+++.. .++
T Consensus 102 ~~~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 102 DCNFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp CEEEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred ccceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 345678899999999999988 89999999999999999999999999987899999999999999998864 234
Q ss_pred hHHHHhhcCcceee-cEEEEecCCCCCCCCC--------CCceeeeec-cc-C-----CCceEEEEecc-----ccCCCC
Q 038410 279 FDETRILGAFRYVY-RDVFLHRDKNFMPQNP--------AAWSAWNFV-GS-T-----NGKICLTYCLN-----VLQNIG 337 (850)
Q Consensus 279 ~~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~--------~~~~s~~~~-~~-~-----~~~~~~~~~~~-----~l~~l~ 337 (850)
+...+.+..++|.+ .+++++++.+++.... ...-.|.+. .. + .+...+..... .+.++.
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~ 258 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHS 258 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSC
T ss_pred HHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCC
Confidence 45688999999999 5667888865321110 000122211 11 1 12223333332 122222
Q ss_pred CC------CCceEEecCCCCCCcc-ceeeEEeccCCCChHHHHHHHHhhhh--cCCCCeEEEcccc-CCCCCcchhhHHH
Q 038410 338 ET------SMPFLATLNPDRTPQN-TLLKWSTGHSVPSVAASKASLELHLI--QGKRGIWYSGVDQ-GYGFPEDGLKVGM 407 (850)
Q Consensus 338 ~~------~~~~~~~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~l~~~--~~~~~l~~aG~~~-g~G~~e~A~~sG~ 407 (850)
+. ..++-..++....|.. .+.||.++.|+|... + ....+ ...++|++||||+ |.|+ |+|+.||+
T Consensus 259 ~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~--~---~~~~~~~~~~~~l~laGd~~~g~~v-~~ai~sg~ 332 (342)
T 3qj4_A 259 IEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAA--N---CPGQMTLHHKPFLACGGDGFTQSNF-DGCITSAL 332 (342)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCS--S---SCSCEEEETTTEEEECSGGGSCSSH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccC--C---CcceeEecCCccEEEEccccCCCCc-cHHHHHHH
Confidence 11 0111112333334444 456999999988651 1 12222 4678999999977 5555 99999999
Q ss_pred HHHHHhcc
Q 038410 408 IAAHGVLG 415 (850)
Q Consensus 408 ~aA~~ilg 415 (850)
.+|+.|+.
T Consensus 333 ~aa~~i~~ 340 (342)
T 3qj4_A 333 CVLEALKN 340 (342)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99999965
No 34
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.91 E-value=2.5e-23 Score=247.49 Aligned_cols=209 Identities=15% Similarity=0.165 Sum_probs=135.1
Q ss_pred CcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeC------CcEEeCCEEEEecChHHHHHh---
Q 038410 202 PQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN------GSQEFYNGCVMAVHAPDALRI--- 272 (850)
Q Consensus 202 ~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~------G~~i~ad~VV~A~p~~~~~~l--- 272 (850)
+.++.++||++.|+++|++.+ +|++|++|++|+.++++|.|++.+ |++++||+||+|+|+..+.++
T Consensus 562 g~~~~~~gG~~~L~~aLa~~l-----~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~ 636 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEGL-----DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTTC-----CEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred CceEEecCcHHHHHHHHHhCC-----CEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcc
Confidence 456889999999999998754 799999999999999999998876 568999999999999999874
Q ss_pred --hcCCCChHHHHhhcCcceee-cEEEEecCCCCCCCCCCCcee------------eeecccCCCceEEEEecc----cc
Q 038410 273 --LGNQATFDETRILGAFRYVY-RDVFLHRDKNFMPQNPAAWSA------------WNFVGSTNGKICLTYCLN----VL 333 (850)
Q Consensus 273 --l~~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~~~~~s------------~~~~~~~~~~~~~~~~~~----~l 333 (850)
+.++++....+++..++|.+ .+|++.++.++|+.+...+.. ..|.. ....+++.+..+ .+
T Consensus 637 I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~-~~~pvLl~~v~G~~a~~l 715 (852)
T 2xag_A 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL-YKAPILLALVAGEAAGIM 715 (852)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEEC-SSSSEEEEEECHHHHHHG
T ss_pred cccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecC-CCCCEEEEEecCcCHHHH
Confidence 34446777788899999988 788899999998753222211 01111 122344333332 12
Q ss_pred CCCCCC-----CCceE-EecCCCC--CCcc-ceeeEEe------ccCCCChHHHH-HHHHhhh-----------hcCCCC
Q 038410 334 QNIGET-----SMPFL-ATLNPDR--TPQN-TLLKWST------GHSVPSVAASK-ASLELHL-----------IQGKRG 386 (850)
Q Consensus 334 ~~l~~~-----~~~~~-~~l~~~~--~~~~-~~~~w~~------~~p~~~~~~~~-~~~~l~~-----------~~~~~~ 386 (850)
..+.+. ..+.+ ..++... .|.. .+.+|.. ++..+.++... ....+.+ .++.++
T Consensus 716 ~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~gr 795 (852)
T 2xag_A 716 ENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPR 795 (852)
T ss_dssp GGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCC
T ss_pred hcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCc
Confidence 222211 00111 1122221 2333 4457754 33333333211 1222322 123479
Q ss_pred eEEEcccc---CCCCCcchhhHHHHHHHHhccc
Q 038410 387 IWYSGVDQ---GYGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 387 l~~aG~~~---g~G~~e~A~~sG~~aA~~ilg~ 416 (850)
|||||+++ +.|++++|+.||.++|++|+..
T Consensus 796 L~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~ 828 (852)
T 2xag_A 796 LFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 828 (852)
T ss_dssp EEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999976 4678899999999999999764
No 35
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.91 E-value=2.9e-23 Score=244.66 Aligned_cols=209 Identities=14% Similarity=0.156 Sum_probs=134.5
Q ss_pred CcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeC------CcEEeCCEEEEecChHHHHHh---
Q 038410 202 PQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN------GSQEFYNGCVMAVHAPDALRI--- 272 (850)
Q Consensus 202 ~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~------G~~i~ad~VV~A~p~~~~~~l--- 272 (850)
+.++.++||+++++++|++. .+|++|++|++|+.++++|.|++.+ |++++||+||+|+|+..+.++
T Consensus 391 g~~~~~~gG~~~l~~~La~~-----l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~ 465 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAEG-----LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 465 (662)
T ss_dssp SCCEEETTCTTHHHHHHTTT-----CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred CceeeecCcHHHHHHHHHhc-----CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCc
Confidence 45689999999999999874 4899999999999999999999876 567999999999999999873
Q ss_pred --hcCCCChHHHHhhcCcceee-cEEEEecCCCCCCCCCCCcee------------eeecccCCCceEEEEeccc----c
Q 038410 273 --LGNQATFDETRILGAFRYVY-RDVFLHRDKNFMPQNPAAWSA------------WNFVGSTNGKICLTYCLNV----L 333 (850)
Q Consensus 273 --l~~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~~~~~s------------~~~~~~~~~~~~~~~~~~~----l 333 (850)
+.++++....+++..++|.+ .++++.++.++|+.+...+.. ..|. .....+++.+..+. +
T Consensus 466 i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~-~~~~~vL~~~~~G~~a~~~ 544 (662)
T 2z3y_A 466 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN-LYKAPILLALVAGEAAGIM 544 (662)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEEC-CSSSSEEEEEECTHHHHHH
T ss_pred eEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEe-CCCCCEEEEEeccHhHHHH
Confidence 34556777788899999988 788899999998754222211 1111 11223443333331 2
Q ss_pred CCCCCC-----CCceEE-ecCCCC--CCcc-ceeeEEe------ccCCCChHHHH-HHHHhhh-----------hcCCCC
Q 038410 334 QNIGET-----SMPFLA-TLNPDR--TPQN-TLLKWST------GHSVPSVAASK-ASLELHL-----------IQGKRG 386 (850)
Q Consensus 334 ~~l~~~-----~~~~~~-~l~~~~--~~~~-~~~~w~~------~~p~~~~~~~~-~~~~l~~-----------~~~~~~ 386 (850)
..+.+. ..+.+. .++... .|.. .+.+|.. +++.+.++... ..+.+.+ .++.++
T Consensus 545 ~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~gr 624 (662)
T 2z3y_A 545 ENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPR 624 (662)
T ss_dssp TTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCC
T ss_pred HhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCc
Confidence 222211 001111 122221 2333 4457754 23323333211 1122222 123579
Q ss_pred eEEEccccC---CCCCcchhhHHHHHHHHhccc
Q 038410 387 IWYSGVDQG---YGFPEDGLKVGMIAAHGVLGK 416 (850)
Q Consensus 387 l~~aG~~~g---~G~~e~A~~sG~~aA~~ilg~ 416 (850)
|||||+++. .|++++|+.||+++|++|+..
T Consensus 625 l~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~ 657 (662)
T 2z3y_A 625 LFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 657 (662)
T ss_dssp EEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 999999763 678899999999999999653
No 36
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.90 E-value=9.4e-27 Score=249.73 Aligned_cols=237 Identities=17% Similarity=0.176 Sum_probs=183.7
Q ss_pred HHhcCCCcceeecccCCCCCCHHHH---HH----HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEe
Q 038410 575 SLFLGKSMMYSCAIFKSEYEDLDVA---QM----RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGIT 645 (850)
Q Consensus 575 ~~~l~~~~~ys~~~~~~~~~~l~~a---q~----~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid 645 (850)
+.|+++.|.|+++|+..+..+++.+ |. .+.+.+++.+.++++++|||||||+|.++..+++. . +.+|+|+|
T Consensus 28 ~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD 107 (317)
T 1dl5_A 28 EEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVE 107 (317)
T ss_dssp GGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEE
T ss_pred HHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEE
Confidence 4678899999999987654344444 43 77889999999999999999999999999999988 2 35799999
Q ss_pred CCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 646 LSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 646 ~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+|+++++.|+++++..|++ +++++++|+.+.. ..++||+|++..+++|++ +++.++|||||+++++..+.
T Consensus 108 ~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 108 YSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBG
T ss_pred CCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCC
Confidence 9999999999999999987 5999999998865 457899999999999996 46889999999999986554
Q ss_pred C--CCcCCCC-cCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHHH-HHHhcHHHHHhccC
Q 038410 725 P--DQCYDGH-RLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRT-NLMEKQSEILALGF 800 (850)
Q Consensus 725 ~--~~~~~~~-~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~-~~~~~~~~~~~~~~ 800 (850)
. +.....+ +...+|+.+++||++.+|....+...+++. ++. +..+ .|..|++.|+. +|.+.++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~--~~~--~~~~--~y~~tl~~~~~~~f~~~~~~~----- 247 (317)
T 1dl5_A 179 LSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLERN--RKL--LREF--PFNREILLVRSHIFVELVDLL----- 247 (317)
T ss_dssp GGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCHHHHH--HTT--CCCC--CEEEEEECTTHHHHHHHHHHH-----
T ss_pred CcccceEEEEEEeCCcEEEEEeccEEEEEccCccccccccc--hhh--hhcc--cchhhccCcchhhhhhhhhhh-----
Confidence 2 2212112 123568899999999999877765444431 211 1122 38899999998 999888765
Q ss_pred CHHHHHHHH-HHHHHHHH--HhccCcceEEEEEEEec
Q 038410 801 NEKFIRTWE-YYFDYCAA--GFKSRTLGNYQIVFSRP 834 (850)
Q Consensus 801 ~~~~~r~w~-~yl~~~~~--~f~~~~~~~~q~~~~~~ 834 (850)
++++.+||+ +||++|++ +|+.|.+.+ ...||
T Consensus 248 ~~~~~~~~~~~yl~~~~~~~~F~~~~~~v---~~~~~ 281 (317)
T 1dl5_A 248 TRRLTEIDGTFYYAGPNGVVEFLDDRMRI---YGDAP 281 (317)
T ss_dssp HSCEEEETTEEEEECSSEEEEEETTEEEE---EECCH
T ss_pred ccccCccCceEEEECCCCeEEEeCCcEEE---EecHH
Confidence 344568898 78899976 799877666 44565
No 37
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.88 E-value=6.3e-22 Score=228.63 Aligned_cols=295 Identities=15% Similarity=0.169 Sum_probs=171.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--------CeEEEEecCC-CC----------------CCcceEEee-------CCee
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG--------VEVVLYEKED-SL----------------GGHAKTVTI-------DGVD 48 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G--------~~V~VlEa~~-~~----------------GG~~~s~~~-------~G~~ 48 (850)
++|+|||||++||+||+.|+++| ++|+|||+++ ++ ||++.+... ++..
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~~ 136 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDTI 136 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCcE
Confidence 47999999999999999999998 9999999999 99 999999977 4589
Q ss_pred eecceeeccCCCchHHHHHHHHc-CCCc--cc--cc--ceeeE------EecCCCc-cccCCCCC-CchhhHHhhhc---
Q 038410 49 LDIGFMLFNHVEYPNMMEFLESL-GVDM--GT--SD--MSFSV------SLDKGQG-YEWGTRNG-LSSLFAQKKNV--- 110 (850)
Q Consensus 49 ~d~G~~~~~~~~~~~~~~l~~~l-gl~~--~~--~~--~~~~~------~~~~g~~-~~~~~~~~-l~~~~~~~~~~--- 110 (850)
+|.|++++ +..++.++++++++ |++. .. .. ....+ ...+|.. ..+..... ....+......
T Consensus 137 ~e~G~~~~-~~~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~~ 215 (721)
T 3ayj_A 137 YEVGAMRF-PEIAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLVG 215 (721)
T ss_dssp EECSCCCE-ETTCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHTC
T ss_pred EecCCEEe-cCccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHHH
Confidence 99999998 45678889999999 9862 11 11 11111 1233443 33332211 11111110000
Q ss_pred -cC-------------hH-HHHH----------HHHHHh-----hhH-----HHHHHHHhhcCCCCCCCCCcH---HHHH
Q 038410 111 -LN-------------PY-FWQM----------LREMMK-----FKD-----DVLSYVEELENSPDIDRNETL---GHFI 152 (850)
Q Consensus 111 -~~-------------~~-~~~~----------~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~s~---~~~l 152 (850)
.. +. ..++ +..+.. +.. .....+..... ...+..++ .+|+
T Consensus 216 ~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla--~~~d~~S~~~~~~~L 293 (721)
T 3ayj_A 216 NPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVT--VAFEKGTLPPVDGVL 293 (721)
T ss_dssp CSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHH--HHHHHTSSCCGGGTS
T ss_pred HhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHH--HhhcccchhHHHHHH
Confidence 00 00 0000 000000 000 00000000000 00012222 3333
Q ss_pred hh-cCCCHHHHHHHHhhhhccccc-CCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCceEe
Q 038410 153 KS-RGYSELFLKAYLIPICSSVWS-CPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIR 230 (850)
Q Consensus 153 ~~-~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~ 230 (850)
+. ..++ .. ..++..+..+..+ .+.... +...++.+. . ......++.+.||+++++++|++.+.+ |+.|+
T Consensus 294 ~~~~~~s-~~-~~~~~~~~~~~gg~~~~~~~---S~le~L~~~--~-~~~~~~~~~i~GG~~~L~~aLa~~l~~-g~~I~ 364 (721)
T 3ayj_A 294 DVDESIS-YY-VELFGRFGFGTGGFKPLYNI---SLVEMMRLI--L-WDYSNEYTLPVTENVEFIRNLFLKAQN-VGAGK 364 (721)
T ss_dssp CHHHHHH-HH-HHHHHHHCSSSSCCGGGTTB---BHHHHHHHH--H-TTTTCEECCSSSSTHHHHHHHHHHHHH-HTTTS
T ss_pred HhccccH-HH-HHHHHHHhhccCCCCCccch---hHHHHHHHH--h-cCCccceeEECCcHHHHHHHHHHhccc-CCceE
Confidence 22 0011 11 1111111111111 111112 332222222 1 122456788999999999999999743 56799
Q ss_pred eCCceE--EEEecCCc-------eEEE-eeCCc--EEeCCEEEEecChHHHHH------hh-------------------
Q 038410 231 MSCEVY--SVFPADEG-------CSIV-CVNGS--QEFYNGCVMAVHAPDALR------IL------------------- 273 (850)
Q Consensus 231 ~~~~V~--~I~~~~~~-------v~V~-~~~G~--~i~ad~VV~A~p~~~~~~------ll------------------- 273 (850)
++++|+ +|..++++ |+|+ +.+|+ +++||+||+|+|...+.. +-
T Consensus 365 l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~ 444 (721)
T 3ayj_A 365 LVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTY 444 (721)
T ss_dssp EEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEE
T ss_pred eCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccc
Confidence 999999 99987555 8884 45676 789999999999998854 21
Q ss_pred ---cCC-C-C-------hHHHHhhcCcceee-cEEEEec-----CCCCCCCC
Q 038410 274 ---GNQ-A-T-------FDETRILGAFRYVY-RDVFLHR-----DKNFMPQN 307 (850)
Q Consensus 274 ---~~~-~-~-------~~~~~~l~~i~~~~-~~v~l~~-----d~~~~p~~ 307 (850)
.++ + + ....++++.+.|.+ +++.+.+ +.++|...
T Consensus 445 ~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~ 496 (721)
T 3ayj_A 445 NQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQW 496 (721)
T ss_dssp EEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEE
T ss_pred cccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccccc
Confidence 122 2 5 67789999999998 8888998 88888765
No 38
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.88 E-value=3.8e-20 Score=208.74 Aligned_cols=255 Identities=15% Similarity=0.130 Sum_probs=154.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCC-ee---------------eecceeeccC------
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDG-VD---------------LDIGFMLFNH------ 58 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G-~~---------------~d~G~~~~~~------ 58 (850)
+||||||||++||+||+.|+++|++|+|||+++++||+++|...+| +. ++.|.++...
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~~l 91 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFL 91 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCCBE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccccee
Confidence 4899999999999999999999999999999999999999987655 22 3334333211
Q ss_pred CCchHHHHHHHHcCCCccc--ccceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHh-
Q 038410 59 VEYPNMMEFLESLGVDMGT--SDMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEE- 135 (850)
Q Consensus 59 ~~~~~~~~l~~~lgl~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (850)
...+.+.++++++|+.... ......+.+.+|+.+.++. .....+ ...+.... ....+.++..........
T Consensus 92 ~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~--~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 164 (453)
T 2bcg_G 92 MANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPA--NEIEAI--SSPLMGIF---EKRRMKKFLEWISSYKEDD 164 (453)
T ss_dssp ETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCS--SHHHHH--HCTTSCHH---HHHHHHHHHHHHHHCBTTB
T ss_pred ecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCC--ChHHHH--hhhccchh---hHHHHHHHHHHHHHhccCC
Confidence 1345788999999985321 1111122234555443322 100000 01111110 001112221111111000
Q ss_pred hcC-CCCCCCCCcHHHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHH----HHHHHHhhhcCCCcEEEecCC
Q 038410 136 LEN-SPDIDRNETLGHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSV----LSFCRLFQLFGHPQCVTVRRH 210 (850)
Q Consensus 136 ~~~-~~~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~gG 210 (850)
... ........++.+|+++.+.++.+.+.+..... +...+ .....|+... ..++.....+....+.+++||
T Consensus 165 p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~--l~~~~--~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~p~gG 240 (453)
T 2bcg_G 165 LSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMA--LWTND--DYLQQPARPSFERILLYCQSVARYGKSPYLYPMYG 240 (453)
T ss_dssp GGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS--CCSSS--GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTC
T ss_pred chhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHH--hccCc--cccCCchHHHHHHHHHHHHHHHhhcCCceEeeCCC
Confidence 000 00012578999999998888887654432221 11110 0001122222 223333333455678899999
Q ss_pred hHHHHHHHHHHhhccCceEeeCCceEEEEec--CCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 211 SHSQIDKVSEQLKSWGIQIRMSCEVYSVFPA--DEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 211 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~--~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
++.++++|++.+++.|++|++|++|++|..+ ++++ .|++ +|+++.||+||+|++++
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 9999999999999999999999999999988 7775 5665 58889999999999886
No 39
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.87 E-value=9.7e-22 Score=214.46 Aligned_cols=346 Identities=10% Similarity=0.119 Sum_probs=213.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEe-eCCeee-ecceeeccCCCchHHHHHHHHcCCCccccc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVT-IDGVDL-DIGFMLFNHVEYPNMMEFLESLGVDMGTSD 79 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~-~~G~~~-d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~ 79 (850)
||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+ +.|+|.+. ...+.++++++++|......
T Consensus 31 dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~- 108 (397)
T 3hdq_A 31 DYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFH-TNSKDVFEYLSRFTEWRPYQ- 108 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCE-ESCHHHHHHHHTSCCEEECC-
T ss_pred CEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccC-CChHHHHHHHHHhhhccccc-
Confidence 899999999999999999999999999999999999999887 578765 99999994 57889999999998532211
Q ss_pred ceeeEEecCCCccccCCCCCCchhhHHhhh-ccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCCC
Q 038410 80 MSFSVSLDKGQGYEWGTRNGLSSLFAQKKN-VLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGYS 158 (850)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 158 (850)
.......+|+.++++. .+..+ ..... ...+ .... ..+... . ....++.++++|+.+. ++
T Consensus 109 -~~~~~~~~g~l~~lP~--~~~~~-~~l~~~~~~~---~~~~----------~~l~~~-~-~~~~~~~s~~e~~~~~-~G 168 (397)
T 3hdq_A 109 -HRVLASVDGQLLPIPI--NLDTV-NRLYGLNLTS---FQVE----------EFFASV-A-EKVEQVRTSEDVVVSK-VG 168 (397)
T ss_dssp -CBEEEEETTEEEEESC--CHHHH-HHHHTCCCCH---HHHH----------HHHHHH-C-CCCSSCCBHHHHHHHH-HH
T ss_pred -ccceEEECCEEEEcCC--ChHHH-HHhhccCCCH---HHHH----------HHHhhc-c-cCCCCCcCHHHHHHHh-cC
Confidence 1222334566665543 11111 01100 0111 1111 111111 1 1223678999999987 88
Q ss_pred HHHHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhc----CCCcE-EEecCChHHHHHHHHHHhhccCceEeeCC
Q 038410 159 ELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLF----GHPQC-VTVRRHSHSQIDKVSEQLKSWGIQIRMSC 233 (850)
Q Consensus 159 ~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~-~~~~gG~~~l~~~L~~~l~~~G~~i~~~~ 233 (850)
+.+.+.++.|++.++|+.++++++.. .+.. +...... ....+ .+|+||+.+++++|++.. |++|++|+
T Consensus 169 ~~~~e~~~~py~~k~~~~~~~~Lsa~---~~~R-vp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~---g~~V~l~~ 241 (397)
T 3hdq_A 169 RDLYNKFFRGYTRKQWGLDPSELDAS---VTAR-VPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSP---NIKVMLNT 241 (397)
T ss_dssp HHHHHHHTHHHHHHHHSSCGGGSBTT---TGGG-SCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCST---TEEEEESC
T ss_pred HHHHHHHHHHHhCchhCCCHHHHHHH---HHHh-cCcccccCccchhhhheeccCCCHHHHHHHHHhcc---CCEEEECC
Confidence 89999999999999999999999532 1111 0000001 11233 479999999999987644 89999999
Q ss_pred ceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCcceeecEEE-EecCCCCCCCCCCCce
Q 038410 234 EVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYVYRDVF-LHRDKNFMPQNPAAWS 312 (850)
Q Consensus 234 ~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~~~v~-l~~d~~~~p~~~~~~~ 312 (850)
+|+++ +..+.+|+||+|+|++.+... .++.++|.+..++ +.++..-... ..|
T Consensus 242 ~v~~~-------------~~~~~~d~vI~T~P~d~~~~~-----------~~g~L~yrsl~~~~~~~~~~~~~~--~~~- 294 (397)
T 3hdq_A 242 DYREI-------------ADFIPFQHMIYTGPVDAFFDF-----------CYGKLPYRSLEFRHETHDTEQLLP--TGT- 294 (397)
T ss_dssp CGGGT-------------TTTSCEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSCS--SSE-
T ss_pred eEEec-------------cccccCCEEEEcCCHHHHHHH-----------hcCCCCCceEEEEEEEeccccCCC--CeE-
Confidence 99833 334679999999998765321 3568899985554 5566432211 112
Q ss_pred eeeecccCCCceEEEEeccccCCCCCCCCceE-Eec-CCCCCCccceeeEEeccCCCChHHHHHHHHhhh-hcCCCCeEE
Q 038410 313 AWNFVGSTNGKICLTYCLNVLQNIGETSMPFL-ATL-NPDRTPQNTLLKWSTGHSVPSVAASKASLELHL-IQGKRGIWY 389 (850)
Q Consensus 313 s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~~l-~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~l~~-~~~~~~l~~ 389 (850)
.+|+... ....++-+.+- ...... ..++ ... .....| -+|+++....+......+ .+..+||+|
T Consensus 295 -vn~~d~~-p~tRi~e~k~~-~~~~~~-~t~i~~Ey~~~~~~p---------yYpv~~~~~~~~~~~y~~~a~~~~~v~~ 361 (397)
T 3hdq_A 295 -VNYPNDY-AYTRVSEFKHI-TGQRHH-QTSVVYEYPRAEGDP---------YYPVPRPENAELYKKYEALADAAQDVTF 361 (397)
T ss_dssp -EECSSSS-SCSEEEEHHHH-HCCCCS-SEEEEEEEEESSSSC---------CEECCSHHHHHHHHHHHHHHHHCTTEEE
T ss_pred -EEeCCCC-cceEEEeeccc-CCCCCC-CEEEEEEECCCCCcc---------ccccCchhHHHHHHHHHHHHhcCCCEEE
Confidence 2232111 11122211110 000000 0000 000 000011 267777655555444444 235679999
Q ss_pred Ecc---ccCCCCCcchhhHHHHHHHHhcccc
Q 038410 390 SGV---DQGYGFPEDGLKVGMIAAHGVLGKS 417 (850)
Q Consensus 390 aG~---~~g~G~~e~A~~sG~~aA~~ilg~~ 417 (850)
+|. |....+ +.++.+|+.+|+.++..+
T Consensus 362 ~GRlg~y~Y~~m-d~~i~~al~~~~~~~~~~ 391 (397)
T 3hdq_A 362 VGRLATYRYYNM-DQVVAQALATFRRLQGQP 391 (397)
T ss_dssp CSTTTTTCCCCH-HHHHHHHHHHHHHHHC--
T ss_pred cccceEEEeccH-HHHHHHHHHHHHHHhcch
Confidence 999 445555 899999999999997643
No 40
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.87 E-value=3.2e-22 Score=211.80 Aligned_cols=218 Identities=13% Similarity=0.153 Sum_probs=163.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--C
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--E 679 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~ 679 (850)
+.+..+++.+..+ +.+|||||||+|.++..+++. +++|+|+|+|+++++.|++++...+++++++++++|+.+++ .
T Consensus 56 ~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 56 QDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL 133 (285)
T ss_dssp HHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC
T ss_pred HHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc
Confidence 3456677777654 679999999999999999998 89999999999999999999999898789999999999987 6
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC-cCcccccccc-------ccCCCCCCC
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH-RLSPGFITEY-------VFPGGCLPS 751 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------i~p~~~~~~ 751 (850)
+++||+|++..+++|++ ++..+++++.++|||||++++.++.......... ......+... .+......+
T Consensus 134 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRD 211 (285)
T ss_dssp SSCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBC
T ss_pred CCCceEEEECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCC
Confidence 78999999999999995 4789999999999999999998875322100000 0000000000 111234568
Q ss_pred HHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEE
Q 038410 752 LNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVF 831 (850)
Q Consensus 752 ~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~ 831 (850)
..++.+.+++ +||++++++.++..+.. |...+ . . .+.+.+++.+.+.+|+...-.+....+++++
T Consensus 212 ~~~l~~~l~~-aGf~v~~~~~~~~~~~~----~~~~~----~----~--~~~~~~l~~~e~~~~~~~~~~~~~~~~~~va 276 (285)
T 4htf_A 212 PTQVYLWLEE-AGWQIMGKTGVRVFHDY----LREKH----Q----Q--RDCYEALLELETRYCRQEPYITLGRYIHVTA 276 (285)
T ss_dssp HHHHHHHHHH-TTCEEEEEEEESSSGGG----CSSTT----H----H--HHTHHHHHHHHHHHTTSTTGGGGCSEEEEEE
T ss_pred HHHHHHHHHH-CCCceeeeeeEEEeeec----ccccc----c----C--cccHHHHHHHHHHhcCCChHHHHHhheEEEE
Confidence 8899888876 79999999887643211 10000 0 0 1126789999999999999999999999999
Q ss_pred EecCCCc
Q 038410 832 SRPSIVA 838 (850)
Q Consensus 832 ~~~~~~~ 838 (850)
+||.+..
T Consensus 277 rK~~~~~ 283 (285)
T 4htf_A 277 RKPQSKD 283 (285)
T ss_dssp ECCCC--
T ss_pred EcCCccc
Confidence 9997643
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.86 E-value=2.2e-22 Score=207.17 Aligned_cols=170 Identities=17% Similarity=0.232 Sum_probs=142.7
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC--C-CCCCccEEEEe
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM--P-EVKKYDTIISC 689 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~--~-~~~~fD~v~s~ 689 (850)
++++.+|||||||+|.++..+++. +++|+|+|+|+++++.|+++ ++++++|+.+. + ++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 567899999999999999999997 89999999999999999865 68899998775 4 56899999999
Q ss_pred cchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCC-CCCCHHHHHHHHhcCCceEEE
Q 038410 690 EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGG-CLPSLNRITSAMTSSSRLCVE 768 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~-~~~~~~~~~~~~~~~~gf~v~ 768 (850)
.+++|++++++..+++++.++|||||+++++++.... ...+...++.|.. ..++..++.+.+.+ +||+++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~l~~-aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS--------LYSLINFYIDPTHKKPVHPETLKFILEY-LGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS--------HHHHHHHTTSTTCCSCCCHHHHHHHHHH-HTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch--------hHHHHHHhcCccccccCCHHHHHHHHHH-CCCeEE
Confidence 9999999878899999999999999999998776322 1123334555543 46778888877776 799999
Q ss_pred EeeecC----------CcHHHHHHHHHHH-HHhcHHHHHhccCCH
Q 038410 769 HLENIG----------IHFYQTLRCWRTN-LMEKQSEILALGFNE 802 (850)
Q Consensus 769 ~~~~~~----------~~y~~tl~~w~~~-~~~~~~~~~~~~~~~ 802 (850)
.++.+. .+ +.++..|+++ |.++++.+.+++|++
T Consensus 180 ~~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~~f~~ 223 (240)
T 3dli_A 180 KIEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRILFGP 223 (240)
T ss_dssp EEEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhhccCc
Confidence 998887 67 7899999999 999999998887775
No 42
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.86 E-value=7.1e-21 Score=206.67 Aligned_cols=300 Identities=16% Similarity=0.188 Sum_probs=189.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCcccccc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMGTSDM 80 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~~~~~ 80 (850)
+||+|||||++||++|+.|+++|++|+|||++..+||++.+....+..++.|...+. ...+.+.++++.+........
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 80 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT-ARDRRFATAVKQWQAQGHVAE- 80 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC-CCSHHHHHHHHHHHHHTSEEE-
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEe-cCCHHHHHHHHHHHhCCCeee-
Confidence 499999999999999999999999999999999999999999889999999988874 344555566554421100000
Q ss_pred eeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCCCCcHHHHHhhcCCCHH
Q 038410 81 SFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEELENSPDIDRNETLGHFIKSRGYSEL 160 (850)
Q Consensus 81 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~ 160 (850)
+ .+....... .. +
T Consensus 81 ---~---~~~~~~~~~-------------------------------------------------~~---------~--- 93 (336)
T 1yvv_A 81 ---W---TPLLYNFHA-------------------------------------------------GR---------L--- 93 (336)
T ss_dssp ---E---CCCEEEESS-------------------------------------------------SB---------C---
T ss_pred ---c---cccceeccC-------------------------------------------------cc---------c---
Confidence 0 000000000 00 0
Q ss_pred HHHHHHhhhhcccccCCcchhccCCHHHHHHHHHHhhhcCCCcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEe
Q 038410 161 FLKAYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLFQLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFP 240 (850)
Q Consensus 161 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~ 240 (850)
... ......+....|+..+.++|++ |++|+++++|++|+.
T Consensus 94 --------------~~~---------------------~~~~~~~~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~ 133 (336)
T 1yvv_A 94 --------------SPS---------------------PDEQVRWVGKPGMSAITRAMRG-----DMPVSFSCRITEVFR 133 (336)
T ss_dssp --------------CCC---------------------CTTSCEEEESSCTHHHHHHHHT-----TCCEECSCCEEEEEE
T ss_pred --------------ccC---------------------CCCCccEEcCccHHHHHHHHHc-----cCcEEecCEEEEEEE
Confidence 000 0001234456678888887776 679999999999999
Q ss_pred cCCceEEEeeCCcEEe-CCEEEEecChHHHHHhhcCCCChHHHHhhcCcceee-cEEEEecCCCCCCCCCCC-----cee
Q 038410 241 ADEGCSIVCVNGSQEF-YNGCVMAVHAPDALRILGNQATFDETRILGAFRYVY-RDVFLHRDKNFMPQNPAA-----WSA 313 (850)
Q Consensus 241 ~~~~v~V~~~~G~~i~-ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~~-~~v~l~~d~~~~p~~~~~-----~~s 313 (850)
++++|.|++.+|+.+. ||.||+|+|++.+.+++.. .+.....+..+.|.+ ..+.+.++.+........ .-.
T Consensus 134 ~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (336)
T 1yvv_A 134 GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAA--APKLASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDSPLD 211 (336)
T ss_dssp CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTT--CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSSSEE
T ss_pred eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhcc--CHHHHHHHhhcCccceeEEEEEecCCCCCCCCeEEeCCCcee
Confidence 9999999999998664 9999999999999888754 456677888999998 444567766543221110 112
Q ss_pred eeeccc--C--CCc-eEEEEecc-----ccCCCCCC--CCce---E-EecCCCC-CCcc-ceeeEEeccCCCChHHHHHH
Q 038410 314 WNFVGS--T--NGK-ICLTYCLN-----VLQNIGET--SMPF---L-ATLNPDR-TPQN-TLLKWSTGHSVPSVAASKAS 375 (850)
Q Consensus 314 ~~~~~~--~--~~~-~~~~~~~~-----~l~~l~~~--~~~~---~-~~l~~~~-~~~~-~~~~w~~~~p~~~~~~~~~~ 375 (850)
|.+... | .+. ..+..... .+.++.+. ..++ + ..++... .|.. ...+|.++.|.+.....
T Consensus 212 ~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~--- 288 (336)
T 1yvv_A 212 WLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWG--- 288 (336)
T ss_dssp EEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCS---
T ss_pred EEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCC---
Confidence 232211 1 111 22322221 12222211 0011 1 1123221 2332 45599999888765332
Q ss_pred HHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhcccc
Q 038410 376 LELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKS 417 (850)
Q Consensus 376 ~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~ 417 (850)
......++|++||||+..+.+++|+.||..+|+.|....
T Consensus 289 ---~~~~~~~rl~laGDa~~g~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 289 ---ALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp ---CEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHT
T ss_pred ---eeecCCCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 012355799999997744444999999999999997654
No 43
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.84 E-value=9.6e-20 Score=189.59 Aligned_cols=213 Identities=15% Similarity=0.196 Sum_probs=154.2
Q ss_pred HHHHHHHc-CCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCC
Q 038410 604 VSLLIEKA-RVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVK 681 (850)
Q Consensus 604 ~~~~~~~l-~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~ 681 (850)
...+++.+ .++++.+|||||||+|.++..+++..+++|+|+|+|+++++.|+++++..+++++++++++|+.+++ +++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 34556665 5788999999999999999999998556999999999999999999999999888999999999988 678
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+||+|++..+++|++ +..+++++.++|||||++++.++....... ......+... .+| .+++..++.+.+.+
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~~~~~~~~~~l~~ 185 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSER--PAEIEDFWMD-AYP--EISVIPTCIDKMER 185 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCC--CHHHHHHHHH-HCT--TCCBHHHHHHHHHH
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCC--hHHHHHHHHH-hCC--CCCCHHHHHHHHHH
Confidence 999999999999993 689999999999999999998876332211 1111112111 123 36789999888876
Q ss_pred CCceEEEEeeecC-----CcHHHHHHHHHHHHHhcHH---HHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEe
Q 038410 762 SSRLCVEHLENIG-----IHFYQTLRCWRTNLMEKQS---EILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSR 833 (850)
Q Consensus 762 ~~gf~v~~~~~~~-----~~y~~tl~~w~~~~~~~~~---~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~ 833 (850)
+||+++....+. .+|...+..+...+..... ...+ +-+...+.+..|..+ .+.++..-++++|
T Consensus 186 -aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~g~~~~v~~k 256 (257)
T 3f4k_A 186 -AGYTPTAHFILPENCWTEHYFAPQDEVRETFMKEHAGNKTAMD--FMKGQQYERSLYSKY------KDYYGYVFYIGQK 256 (257)
T ss_dssp -TTEEEEEEEECCGGGTCCCCCHHHHHHHHHHHHHHTTCHHHHH--HHHHHHHHHHHHHHH------TTTEEEEEEEEEE
T ss_pred -CCCeEEEEEECChhhHHHHHHHHHHHHHHHHHHhcCCCHHHHH--HHHHHHHHHHHHHHh------CCccceEEEEEec
Confidence 799999887765 3444444444444432211 1111 223334444444332 4577788888877
No 44
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.84 E-value=2.4e-19 Score=186.51 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=133.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
..++.+++.+.++++.+|||||||+|.++..+++..+++|+|+|+|+++++.|+++++..|+.++++++++|+.+++.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 45678888889999999999999999999999988788999999999999999999999999889999999999887668
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCcccccccccc-CCCCCCCHHHHHHHHh
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVF-PGGCLPSLNRITSAMT 760 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~~~~~~~~~~~~~~~ 760 (850)
+||+|++..+++|+++ +..++++++++|||||++++.+......... ..+...+.. ....+++..++.+.+.
T Consensus 103 ~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (256)
T 1nkv_A 103 KCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPAT-----EEIAQACGVSSTSDFLTLPGLVGAFD 175 (256)
T ss_dssp CEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSS-----HHHHHTTTCSCGGGSCCHHHHHHHHH
T ss_pred CCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCCh-----HHHHHHHhcccccccCCHHHHHHHHH
Confidence 9999999999999964 7999999999999999999987654332110 111111110 1125678899988877
Q ss_pred cCCceEEEEeeec
Q 038410 761 SSSRLCVEHLENI 773 (850)
Q Consensus 761 ~~~gf~v~~~~~~ 773 (850)
+ +||+++.+...
T Consensus 176 ~-aGf~~~~~~~~ 187 (256)
T 1nkv_A 176 D-LGYDVVEMVLA 187 (256)
T ss_dssp T-TTBCCCEEEEC
T ss_pred H-CCCeeEEEEeC
Confidence 5 79998776554
No 45
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=1.7e-19 Score=187.94 Aligned_cols=185 Identities=17% Similarity=0.170 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccC
Q 038410 596 LDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYR 675 (850)
Q Consensus 596 l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~ 675 (850)
...++...++.+++.+.++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++++.+++ +++++++|+.
T Consensus 18 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~ 95 (260)
T 1vl5_A 18 QIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAE 95 (260)
T ss_dssp -----CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-
T ss_pred ccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHH
Confidence 33444555678888888899999999999999999999987 679999999999999999999988876 7999999999
Q ss_pred CCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccC-CCCCCCHH
Q 038410 676 QMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFP-GGCLPSLN 753 (850)
Q Consensus 676 ~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~ 753 (850)
+++ ++++||+|++..+++|++ ++..+++++.++|||||++++.+...+.... .......+.....+ .....+..
T Consensus 96 ~l~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 171 (260)
T 1vl5_A 96 QMPFTDERFHIVTCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDA--FDVFYNYVEKERDYSHHRAWKKS 171 (260)
T ss_dssp CCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHH--HHHHHHHHHHHHCTTCCCCCBHH
T ss_pred hCCCCCCCEEEEEEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHH--HHHHHHHHHHhcCccccCCCCHH
Confidence 988 678999999999999995 4789999999999999999998776543210 00000001111112 23456788
Q ss_pred HHHHHHhcCCceEEEEeeecCCcHHHHHHHHHHHHH
Q 038410 754 RITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNLM 789 (850)
Q Consensus 754 ~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~ 789 (850)
++.+.+.+ +||+++.++.....+ .+..|.+.+.
T Consensus 172 ~~~~~l~~-aGf~~~~~~~~~~~~--~~~~~~~~~~ 204 (260)
T 1vl5_A 172 DWLKMLEE-AGFELEELHCFHKTF--IFEDWCDRMN 204 (260)
T ss_dssp HHHHHHHH-HTCEEEEEEEEEEEE--EHHHHHHHTT
T ss_pred HHHHHHHH-CCCeEEEEEEeeccC--CHHHHHHhcC
Confidence 88887776 799988877664332 3456766543
No 46
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.81 E-value=5.7e-19 Score=197.74 Aligned_cols=255 Identities=11% Similarity=0.083 Sum_probs=161.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEe-e--------------------CCeeeecceeeccCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVT-I--------------------DGVDLDIGFMLFNHV 59 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~-~--------------------~G~~~d~G~~~~~~~ 59 (850)
+||+|||||++||+||+.|+++|++|+|+|+++++||+++|.. . .++.+|.|++++.
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~-- 84 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM-- 84 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE--
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee--
Confidence 4899999999999999999999999999999999999999988 1 4577888888774
Q ss_pred CchHHHHHHHHcCCCccc--ccceeeEEecCCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHHHHHHh-h
Q 038410 60 EYPNMMEFLESLGVDMGT--SDMSFSVSLDKGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVLSYVEE-L 136 (850)
Q Consensus 60 ~~~~~~~l~~~lgl~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 136 (850)
....+.++++++|+.... ......+.+.+|+.+..+. .....+ ...+.... ....+.++......+... .
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~--~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~~~~~~p 157 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPS--TETEAL--ASNLMGMF---EKRRFRKFLVFVANFDENDP 157 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCC--SHHHHH--HCSSSCHH---HHHHHHHHHHHHHHCCTTCG
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCC--CHHHHh--hCcccChh---hHHHHHHHHHHHHhhcccCc
Confidence 234678999999976421 1111222344555443322 100000 01111110 001111221111110000 0
Q ss_pred c-CCCCCCCCCcHHHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHH----HHHHHhhhcCCCcEEEecCCh
Q 038410 137 E-NSPDIDRNETLGHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVL----SFCRLFQLFGHPQCVTVRRHS 211 (850)
Q Consensus 137 ~-~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~~gG~ 211 (850)
. .........++.+|+++.+.++.+.+.+..++ ....+.++.+. |+...+ .+......++...+++++||+
T Consensus 158 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~-~~~~~~~~~~~---p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~ 233 (433)
T 1d5t_A 158 KTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHAL-ALYRTDDYLDQ---PCLETINRIKLYSESLARYGKSPYLYPLYGL 233 (433)
T ss_dssp GGGTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHT-SCCSSSGGGGS---BSHHHHHHHHHHHHSCCSSSCCSEEEETTCT
T ss_pred hhccccccccCCHHHHHHHcCCCHHHHHHHHHHH-HhccCCCccCC---CHHHHHHHHHHHHHHHHhcCCCcEEEeCcCH
Confidence 0 00001257899999999888887765443321 11122233333 333222 222212223445688999999
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
+.++++|++.+++.|++|++|++|++|..+++++.++..+|+++.||+||+|++++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 999999999999999999999999999998888764446888899999999998874
No 47
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.80 E-value=5.1e-19 Score=196.57 Aligned_cols=253 Identities=11% Similarity=0.105 Sum_probs=164.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeC--------------------CeeeecceeeccCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTID--------------------GVDLDIGFMLFNHVEY 61 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~--------------------G~~~d~G~~~~~~~~~ 61 (850)
||+|||||++|+++|+.|+++|++|+|+|+++++||++.+.... +|.+|++++.+ ...
T Consensus 22 dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l--~~~ 99 (475)
T 3p1w_A 22 DVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI--LVG 99 (475)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE--ETT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe--ecC
Confidence 89999999999999999999999999999999999999888642 46888888877 356
Q ss_pred hHHHHHHHHcCCCcccc----cceeeEEec-------CCCccccCCCCCCchhhHHhhhccChHHHHHHHHHHhhhHHHH
Q 038410 62 PNMMEFLESLGVDMGTS----DMSFSVSLD-------KGQGYEWGTRNGLSSLFAQKKNVLNPYFWQMLREMMKFKDDVL 130 (850)
Q Consensus 62 ~~~~~l~~~lgl~~~~~----~~~~~~~~~-------~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (850)
..+.+++.+.|+..... ...+.+... +|+.+..+. .....+. ...+... .-..+.++.....
T Consensus 100 g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPs--s~~e~~~--~~lLs~~---eK~~l~kFL~~l~ 172 (475)
T 3p1w_A 100 GNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPA--TDMEALV--SPLLSLM---EKNRCKNFYQYVS 172 (475)
T ss_dssp SHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCC--SHHHHHT--CTTSCHH---HHHHHHHHHHHHH
T ss_pred cHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCC--CHHHHhh--ccCCCHH---HHHHHHHHHHHHH
Confidence 68899999999875432 112222111 222232221 1122221 1222221 1122223222211
Q ss_pred HHHHh-hcCCCCC-CCCCcHHHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHHH----HHHHhhhcCCCcE
Q 038410 131 SYVEE-LENSPDI-DRNETLGHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVLS----FCRLFQLFGHPQC 204 (850)
Q Consensus 131 ~~~~~-~~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~ 204 (850)
..... ....... .+..++.+|+++.++++.+.+.+..++..... .+..+. ++...+. |...+..++...+
T Consensus 173 ~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~-~~~~~~---~a~~~l~ri~~y~~Sl~~yg~s~~ 248 (475)
T 3p1w_A 173 EWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLN-DDYLKQ---PAYLTLERIKLYMQSISAFGKSPF 248 (475)
T ss_dssp HCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGGGGS---BHHHHHHHHHHHHHHHHHHSSCSE
T ss_pred hhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCcccC---CHHHHHHHHHHHHHHHhhcCCCce
Confidence 11000 0000111 14689999999999999887755444322221 122222 4444443 2222344566788
Q ss_pred EEecCChHHHHHHHHHHhhccCceEeeCCceEEEEe-cCCc-eEEEeeCCcEEeCCEEEEecChH
Q 038410 205 VTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFP-ADEG-CSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 205 ~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~-~~~~-v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
.+++||++.++++|++.+++.|++|+++++|++|.. ++++ +.|++.+|+++.||+||+|++..
T Consensus 249 ~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 249 IYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred EEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 999999999999999999999999999999999998 6666 57889999889999999999653
No 48
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=8.2e-19 Score=184.60 Aligned_cols=189 Identities=18% Similarity=0.238 Sum_probs=131.6
Q ss_pred ceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc
Q 038410 583 MYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA 661 (850)
Q Consensus 583 ~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~ 661 (850)
.|..+|+......+........+.+.....++++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...
T Consensus 5 ~Y~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 84 (276)
T 3mgg_A 5 EYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN 84 (276)
T ss_dssp ------------------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCCHHHHhhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 355556655555666655555556666667789999999999999999999998 5789999999999999999999998
Q ss_pred CCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC-cCccccc
Q 038410 662 GLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH-RLSPGFI 739 (850)
Q Consensus 662 gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~~ 739 (850)
+++ ++++++.|+.+++ ++++||+|++..+++|+++ +..+++++.++|||||.+++.+........... .....+.
T Consensus 85 ~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 3mgg_A 85 GIK-NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQS--PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAW 161 (276)
T ss_dssp TCC-SEEEEECCGGGCCSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHH
T ss_pred CCC-CcEEEEcccccCCCCCCCeeEEEEechhhhcCC--HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHH
Confidence 876 7999999999988 6789999999999999954 689999999999999999998764322111000 0001111
Q ss_pred ----cccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCC
Q 038410 740 ----TEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGI 775 (850)
Q Consensus 740 ----~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 775 (850)
......++...+..++.+.+.+ +||++++++....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~l~~-aGf~~v~~~~~~~ 200 (276)
T 3mgg_A 162 NCLIRVQAYMKGNSLVGRQIYPLLQE-SGFEKIRVEPRMV 200 (276)
T ss_dssp HHHHHHHHHTTCCTTGGGGHHHHHHH-TTCEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHH-CCCCeEEEeeEEE
Confidence 1111234445566777777775 7999998886543
No 49
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=7.4e-19 Score=181.75 Aligned_cols=112 Identities=14% Similarity=0.211 Sum_probs=103.4
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEe
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISC 689 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~ 689 (850)
+++|.+|||||||+|.++..++++ ++++|+|||+|++|++.|+++++..+...+|+++++|+.+++. ++||+|+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 689999999999999999999986 5789999999999999999999998988899999999999874 469999999
Q ss_pred cchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 690 EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
.+++|+++++...++++++++|||||++++.+....
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 999999988888999999999999999999877644
No 50
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=8.7e-19 Score=174.89 Aligned_cols=154 Identities=16% Similarity=0.107 Sum_probs=119.9
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCCEEEEEc
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAG-----------LQDHIRLYLC 672 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~g-----------l~~~v~~~~~ 672 (850)
+..+++.+.++++.+|||+|||+|..+..++++ |++|+|||+|++|++.|+++..... ...+++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 345566777888999999999999999999998 8999999999999999998864210 1247999999
Q ss_pred ccCCCC-CC-CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCC
Q 038410 673 DYRQMP-EV-KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLP 750 (850)
Q Consensus 673 D~~~~~-~~-~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~ 750 (850)
|+.+++ .+ ++||+|++..+++|++.++...++++++++|||||++++..+..+... . .. | ....
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---~-~~---------~-~~~~ 155 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---L-EG---------P-PFSV 155 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---S-SS---------C-CCCC
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc---c-CC---------C-CCCC
Confidence 999998 33 799999999999999887788999999999999999666555433210 0 00 0 0124
Q ss_pred CHHHHHHHHhcCCceEEEEeeecC
Q 038410 751 SLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 751 ~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
+.+++.+.+. . ||+++.++...
T Consensus 156 ~~~el~~~~~-~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 156 PQTWLHRVMS-G-NWEVTKVGGQD 177 (203)
T ss_dssp CHHHHHHTSC-S-SEEEEEEEESS
T ss_pred CHHHHHHHhc-C-CcEEEEecccc
Confidence 6778866554 4 99998877654
No 51
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.79 E-value=2.1e-19 Score=183.86 Aligned_cols=154 Identities=14% Similarity=0.081 Sum_probs=118.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CC--C
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MP--E 679 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~--~ 679 (850)
..+.+++.+.++++.+|||||||+|.++..++++ +++|+|||+|++|++.|++++... .+.....|+.. .+ .
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc
Confidence 3467888889999999999999999999999997 899999999999999999987543 12222222221 11 2
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCC-----------------------CcCCCCcCcc
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPD-----------------------QCYDGHRLSP 736 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~-----------------------~~~~~~~~~~ 736 (850)
+++||+|+++.+++|+..++...+++++.++| |||+++++...... .....+....
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~ 186 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAG 186 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTT
T ss_pred CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhh
Confidence 47899999999999998888899999999999 99999997543210 1111123467
Q ss_pred ccccccccCCCCCCCHHHHHHHHhcCCc
Q 038410 737 GFITEYVFPGGCLPSLNRITSAMTSSSR 764 (850)
Q Consensus 737 ~~~~~~i~p~~~~~~~~~~~~~~~~~~g 764 (850)
+||.+|+||+|.+|+..-+ +.... .|
T Consensus 187 ~~i~~~~~p~g~~~~~~~~-~~~~~-~g 212 (261)
T 3iv6_A 187 DVLDRALVPHGLIDKPTLL-EWYRR-RG 212 (261)
T ss_dssp HHHHHHCCCCTTCCHHHHH-HHHHH-TC
T ss_pred hHHHhccCCCCcccHHHHH-HHHHh-cC
Confidence 8999999999999988766 45543 35
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=1.6e-18 Score=175.51 Aligned_cols=166 Identities=17% Similarity=0.172 Sum_probs=126.7
Q ss_pred HHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 605 SLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
..+++.+. ++++.+|||||||+|.++..+++. +++|+|+|+|+++++.|++ .+. .+++++++|+.++.++++|
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~ 108 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQW 108 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCE
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCce
Confidence 45555554 678889999999999999999998 8999999999999999988 354 3799999999988667899
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCc--CccccccccccCC------CCCCCHHHH
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHR--LSPGFITEYVFPG------GCLPSLNRI 755 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~p~------~~~~~~~~~ 755 (850)
|+|++..+++|++++....+++++.++|||||.+++.+...+........ ....++.+.+..+ ..+++..++
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAEL 188 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHH
Confidence 99999999999988777999999999999999999998876443222111 0112222222111 235789999
Q ss_pred HHHHhcCCceEEEEeeecCCcH
Q 038410 756 TSAMTSSSRLCVEHLENIGIHF 777 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~~~~y 777 (850)
.+.+.+ +||+++..+..+.|+
T Consensus 189 ~~~l~~-aGf~v~~~~~~~~~~ 209 (218)
T 3ou2_A 189 TERLTA-LGWSCSVDEVHPGFL 209 (218)
T ss_dssp HHHHHH-TTEEEEEEEEETTEE
T ss_pred HHHHHH-CCCEEEeeeccccce
Confidence 888876 799988877766554
No 53
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.78 E-value=9.3e-19 Score=189.28 Aligned_cols=248 Identities=15% Similarity=0.130 Sum_probs=143.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecC-CCCCCcceEEe----------eCCeeeecceeeccCCCchHHHHHHH
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKE-DSLGGHAKTVT----------IDGVDLDIGFMLFNHVEYPNMMEFLE 69 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~-~~~GG~~~s~~----------~~G~~~d~G~~~~~~~~~~~~~~l~~ 69 (850)
+||+|||||++||+||+.|+++|++|+|||++ +++||++.|.+ ..|+.+|.|++++ +..++.+.++++
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~-~~~~~~~~~~~~ 123 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRL-PSFHPLTLALID 123 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCE-ETTCHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceee-cchHHHHHHHHH
Confidence 48999999999999999999999999999999 99999999987 3578999999998 456788999999
Q ss_pred HcCCCcccccce-------------------------------------------eeEEecCCCccccCCCCCCchhhHH
Q 038410 70 SLGVDMGTSDMS-------------------------------------------FSVSLDKGQGYEWGTRNGLSSLFAQ 106 (850)
Q Consensus 70 ~lgl~~~~~~~~-------------------------------------------~~~~~~~g~~~~~~~~~~l~~~~~~ 106 (850)
++|+........ ....+.+|....+.........+..
T Consensus 124 ~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 203 (376)
T 2e1m_A 124 KLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRAQYATDPSSINE 203 (376)
T ss_dssp HTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHHHHHHCTHHHHH
T ss_pred HcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecccccccCHHHhcc
Confidence 999986542111 0011111111100000000000000
Q ss_pred hhhc--------cChHHHHHHHHHHhhhHH-----------H---HHHHHhhcCCCCCCCCCcHHHHHh-hcCCCHHHHH
Q 038410 107 KKNV--------LNPYFWQMLREMMKFKDD-----------V---LSYVEELENSPDIDRNETLGHFIK-SRGYSELFLK 163 (850)
Q Consensus 107 ~~~~--------~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~s~~~~l~-~~~~~~~~~~ 163 (850)
...+ ....+...+..+.+.... . ...+..... . .+..|+.+||. +.++++...+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-lD~~S~~~~L~~~~g~s~~~~~ 280 (376)
T 2e1m_A 204 GFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVR--D-FDGYSMGRFLREYAEFSDEAVE 280 (376)
T ss_dssp HTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHH--H-HTTCBHHHHHHHTSCCCHHHHH
T ss_pred ccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHHH--H-HhCCCHHHHHhhccCCCHHHHH
Confidence 0000 001111222222221000 0 000011000 0 15789999998 7889888766
Q ss_pred HHHhhhhcccccCCcchhccCCHHHHHHHHHHh-hhcCCCcEEEecCChHHHHHHHHHHhhccCceEeeCCceEEEEecC
Q 038410 164 AYLIPICSSVWSCPSDGAMRFSAFSVLSFCRLF-QLFGHPQCVTVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPAD 242 (850)
Q Consensus 164 ~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~ 242 (850)
.+ ..+. + .+.....+. +.++... .......++.+.||+++|+++|++.+ +.+|++|++|++|...+
T Consensus 281 ~~-~~~~----~--~~~~~~~s~---l~~l~~~~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~~~V~~I~~~~ 347 (376)
T 2e1m_A 281 AI-GTIE----N--MTSRLHLAF---FHSFLGRSDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMGQRMVRLEYYD 347 (376)
T ss_dssp HH-HHHT----T--CTTTTTSBH---HHHHHHCSCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECSEEEEEEEECC
T ss_pred HH-Hhhc----C--ccccchhhH---HHHHHHhhhhccCCceEEECCcHHHHHHHHHHhc---CCcEEecCeEEEEEECC
Confidence 44 2221 1 111112232 2333311 22345779999999999999999999 56899999999999998
Q ss_pred CceEEEeeCCcEEeCCEEEEecC
Q 038410 243 EGCSIVCVNGSQEFYNGCVMAVH 265 (850)
Q Consensus 243 ~~v~V~~~~G~~i~ad~VV~A~p 265 (850)
+++.|.+.+.....-.+|.+.|-
T Consensus 348 ~gv~v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 348 PGRDGHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp CC-------------CCEEEEEE
T ss_pred CceEEEeCCCcCCCCCeeEEEec
Confidence 88877655443345667777653
No 54
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.78 E-value=2.3e-18 Score=176.84 Aligned_cols=180 Identities=16% Similarity=0.226 Sum_probs=139.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
......+++.+.++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.+++++...+++ +++++++|+.+++ +
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCC
Confidence 444567888899999999999999999999999987 679999999999999999999988876 7999999999988 6
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccC-CCCCCCHHHHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFP-GGCLPSLNRITSA 758 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~~~~~~ 758 (850)
+++||+|++..+++|++ ++..+++++.++|||||++++.+...+.... .......+.....| .....+..++.+.
T Consensus 85 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPV--LDEFVNHLNRLRDPSHVRESSLSEWQAM 160 (239)
T ss_dssp TTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHH--HHHHHHHHHHHHCTTCCCCCBHHHHHHH
T ss_pred CCcEEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChh--HHHHHHHHHHhccccccCCCCHHHHHHH
Confidence 68999999999999995 4799999999999999999998776543210 00000000100011 2344678888887
Q ss_pred HhcCCceEEEEeeecCCcHHHHHHHHHHHHH
Q 038410 759 MTSSSRLCVEHLENIGIHFYQTLRCWRTNLM 789 (850)
Q Consensus 759 ~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~ 789 (850)
+.+ +||+++.+......+ ....|.+.+.
T Consensus 161 l~~-aGf~~~~~~~~~~~~--~~~~w~~~~~ 188 (239)
T 1xxl_A 161 FSA-NQLAYQDIQKWNLPI--QYDSWIKRGG 188 (239)
T ss_dssp HHH-TTEEEEEEEEEEEEE--EHHHHHHHHT
T ss_pred HHH-CCCcEEEEEeecCcc--CHHHHHHHcC
Confidence 776 799998887764332 3566776664
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=8.4e-19 Score=186.77 Aligned_cols=216 Identities=14% Similarity=0.150 Sum_probs=131.9
Q ss_pred CchHHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHH
Q 038410 554 NTLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEI 633 (850)
Q Consensus 554 ~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l 633 (850)
+++....+++..|||.....|.. .. .++..+ .+... .+++...+....++++.+|||||||+|.++..+
T Consensus 14 ~~~~~~~~~~~~~y~~~~~~~~~---~~-~~~~~~------~~~~~-~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l 82 (298)
T 1ri5_A 14 QAMEGKKEEIREHYNSIRERGRE---SR-QRSKTI------NIRNA-NNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKY 82 (298)
T ss_dssp -------------------------------CCSH------HHHHH-HHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHH
T ss_pred chhhhhHHHHHHHHHHhhccccc---cc-ccchhh------hHHHH-HHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHH
Confidence 45566677899999965433221 11 111111 12222 223333333333678899999999999999999
Q ss_pred HHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCCccEEEEecchhh--hChhhHHHHHHHHHh
Q 038410 634 VKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKKYDTIISCEMIEN--VGHEYIEEFFGCCES 709 (850)
Q Consensus 634 a~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~fD~v~s~~~~~~--~~~~~~~~~~~~~~r 709 (850)
++....+|+|+|+|+++++.|++++...++.++++++++|+.+++ ++++||+|++..+++| ...+++..+++++.+
T Consensus 83 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~ 162 (298)
T 1ri5_A 83 ERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIAR 162 (298)
T ss_dssp HHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHH
Confidence 887445999999999999999999998888778999999999876 4689999999999988 445678999999999
Q ss_pred ccccCeEEEEEEecCCCCc-------CCC--Cc----C--ccc--ccccccc---CC-----CCCCCHHHHHHHHhcCCc
Q 038410 710 LLAEHGLLLLQFSSVPDQC-------YDG--HR----L--SPG--FITEYVF---PG-----GCLPSLNRITSAMTSSSR 764 (850)
Q Consensus 710 ~LkpgG~~~~~~~~~~~~~-------~~~--~~----~--~~~--~~~~~i~---p~-----~~~~~~~~~~~~~~~~~g 764 (850)
+|||||++++......... +.. +. . ... +-..|.| +. ..+.+..++.+.+++ +|
T Consensus 163 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~-aG 241 (298)
T 1ri5_A 163 HLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKR-LG 241 (298)
T ss_dssp TEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHT-TT
T ss_pred hcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHH-cC
Confidence 9999999999876531100 000 00 0 000 0011111 11 245688899877775 79
Q ss_pred eEEEEeeecCCcHHHHH
Q 038410 765 LCVEHLENIGIHFYQTL 781 (850)
Q Consensus 765 f~v~~~~~~~~~y~~tl 781 (850)
|+++..+.+...|..++
T Consensus 242 f~~v~~~~~~~~~~~~~ 258 (298)
T 1ri5_A 242 LSLVERKGFIDFYEDEG 258 (298)
T ss_dssp EEEEEEEEHHHHHHHHH
T ss_pred CEEEEecCHHHHHHHHH
Confidence 99999988766554444
No 56
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=3.6e-18 Score=174.91 Aligned_cols=164 Identities=16% Similarity=0.201 Sum_probs=125.2
Q ss_pred HHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 605 SLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 605 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
+.+++.+. ..++.+|||||||+|.++..+++. ++++|+|+|+|+++++.|++++...+ +++++++|+.+++..++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~ 109 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEK 109 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSC
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCC
Confidence 45555554 567899999999999999999998 58899999999999999999876544 89999999999885589
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCc---------cccc----ccc--ccCCC
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLS---------PGFI----TEY--VFPGG 747 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~---------~~~~----~~~--i~p~~ 747 (850)
||+|++..+++|+++.....++++++++|||||++++.+...+.......... ..+. ... -....
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 99999999999998766668999999999999999998877654321000000 0000 000 01234
Q ss_pred CCCCHHHHHHHHhcCCceEEEEeee
Q 038410 748 CLPSLNRITSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 748 ~~~~~~~~~~~~~~~~gf~v~~~~~ 772 (850)
..++..++.+.+++ +||+++++..
T Consensus 190 ~~~~~~~~~~ll~~-aGF~~v~~~~ 213 (234)
T 3dtn_A 190 KDIEMNQQLNWLKE-AGFRDVSCIY 213 (234)
T ss_dssp CCCBHHHHHHHHHH-TTCEEEEEEE
T ss_pred cccCHHHHHHHHHH-cCCCceeeee
Confidence 56788888877776 7999887654
No 57
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=4.3e-18 Score=170.24 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=116.5
Q ss_pred CCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhh
Q 038410 616 GLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIEN 694 (850)
Q Consensus 616 ~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~ 694 (850)
+.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++. .+++++++|+.+++ ++++||+|++..+++|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 789999999999999999998 889999999999999999873 27899999999987 6789999999999999
Q ss_pred hChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 695 VGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 695 ~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
++.+++..+++++.++|||||++++......... .+. ... ......+..++.+.+.+ +||+++.++...
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~-------~~~-~~~~~~~~~~~~~~l~~-~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 115 MGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE--PMY-------HPV-ATAYRWPLPELAQALET-AGFQVTSSHWDP 183 (203)
T ss_dssp CCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE--EEC-------CSS-SCEEECCHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh--hhh-------chh-hhhccCCHHHHHHHHHH-CCCcEEEEEecC
Confidence 9877899999999999999999999877644311 000 000 01234578888888876 799999987754
No 58
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=2.8e-18 Score=174.00 Aligned_cols=162 Identities=15% Similarity=0.133 Sum_probs=124.2
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCcc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYD 684 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD 684 (850)
+.+++.+..+++.+|||||||+|.++..+++. +++|+|+|+|+++++.+++++. ++++++++|+.+++..++||
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD 108 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSID 108 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCS
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeE
Confidence 45666666678999999999999999999998 8999999999999999998864 47999999999988438999
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccc-------cccCCCCCCCHHHHHH
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITE-------YVFPGGCLPSLNRITS 757 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~-------~i~p~~~~~~~~~~~~ 757 (850)
+|++..+++|+++.....+++++.++|||||.+++.+......... ......... .-.+...+++..++.+
T Consensus 109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (220)
T 3hnr_A 109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAY--DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQT 186 (220)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHH--HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHH
T ss_pred EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHH--HHHHHHHHhCCCccchhhcchhhcCCHHHHHH
Confidence 9999999999987655569999999999999999987654432110 000000000 0011235678899988
Q ss_pred HHhcCCceEEEEeeecCC
Q 038410 758 AMTSSSRLCVEHLENIGI 775 (850)
Q Consensus 758 ~~~~~~gf~v~~~~~~~~ 775 (850)
.+.+ +||+++.......
T Consensus 187 ~l~~-aGf~v~~~~~~~~ 203 (220)
T 3hnr_A 187 IFEN-NGFHVTFTRLNHF 203 (220)
T ss_dssp HHHH-TTEEEEEEECSSS
T ss_pred HHHH-CCCEEEEeeccce
Confidence 8876 7999988776543
No 59
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.76 E-value=1.3e-17 Score=168.90 Aligned_cols=154 Identities=16% Similarity=0.184 Sum_probs=129.6
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVK 681 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~ 681 (850)
+.+++.+.++++.+|||||||+|.++..+++.. .++|+|+|+|+++++.|++++...+++ +++++++|+.+++ +++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCC
Confidence 567888888999999999999999999999983 479999999999999999999998886 7999999999987 678
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+||+|++..+++|+. ++..+++++.++|||||++++.++......... .. ....+..++.+.+.+
T Consensus 106 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 106 TVDFIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----PP--------EEVYSEWEVGLILED 170 (219)
T ss_dssp CEEEEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----CG--------GGSCCHHHHHHHHHH
T ss_pred CeeEEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccccCC-----ch--------hcccCHHHHHHHHHH
Confidence 999999999999995 579999999999999999999887655432110 01 123578888887776
Q ss_pred CCceEEEEeeecCC
Q 038410 762 SSRLCVEHLENIGI 775 (850)
Q Consensus 762 ~~gf~v~~~~~~~~ 775 (850)
+||+++....++.
T Consensus 171 -~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 171 -AGIRVGRVVEVGK 183 (219)
T ss_dssp -TTCEEEEEEEETT
T ss_pred -CCCEEEEEEeeCC
Confidence 7999988877654
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.76 E-value=7.8e-18 Score=172.50 Aligned_cols=153 Identities=14% Similarity=0.171 Sum_probs=125.3
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCcc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYD 684 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD 684 (850)
..++..+.++++ +|||||||+|.++..+++. +++|+|+|+|+++++.|++++...+..++++++++|+.+++++++||
T Consensus 57 ~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 57 VHLVDTSSLPLG-RALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp HHHHHTTCSCCE-EEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred HHHHHhcCCCCC-CEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 455555565554 9999999999999999885 89999999999999999999987666668999999999988767999
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCc
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSR 764 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 764 (850)
+|++..+++|+++++...+++++.++|||||++++..+....... ... ...+..++.+.+.+ +|
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~l~~-~G 198 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG-----GPP----------YKVDVSTFEEVLVP-IG 198 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS-----CSS----------CCCCHHHHHHHHGG-GT
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC-----CCC----------ccCCHHHHHHHHHH-cC
Confidence 999999999998778999999999999999999997765432110 000 12467888777775 79
Q ss_pred eEEEEeeecCC
Q 038410 765 LCVEHLENIGI 775 (850)
Q Consensus 765 f~v~~~~~~~~ 775 (850)
|+++.++....
T Consensus 199 f~~~~~~~~~~ 209 (235)
T 3lcc_A 199 FKAVSVEENPH 209 (235)
T ss_dssp EEEEEEEECTT
T ss_pred CeEEEEEecCC
Confidence 99999887654
No 61
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.75 E-value=1.1e-19 Score=183.89 Aligned_cols=174 Identities=14% Similarity=0.229 Sum_probs=116.4
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCC-HHHHHHH---HHHHHHcCCCCCEEEEEcccCCCCCCCCccEEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLS-EEQLKYT---ETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTII 687 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s-~~~~~~a---~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~ 687 (850)
.+++.+|||||||+|.++..++++ ++++|+|||+| +.|++.| ++++.+.+++ +++++++|+++++ ...||.|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~-~~~~d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLP-FELKNIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCC-GGGTTCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhh-hhccCeEE
Confidence 368889999999999999999975 78899999999 6666665 8888777876 7999999999996 22345555
Q ss_pred EecchhhhCh------hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHH-----HHH
Q 038410 688 SCEMIENVGH------EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLN-----RIT 756 (850)
Q Consensus 688 s~~~~~~~~~------~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~-----~~~ 756 (850)
++.+....+. .+...++++++|+|||||++++... ..+. +.. ..+..+ .+| .++.. ++.
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~-~~~~-~~~----~~~~~~-~~~---~~~~~~~~~~el~ 169 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTT-YSDS-YEE----AEIKKR-GLP---LLSKAYFLSEQYK 169 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEEC-CCC-----------------------CCHHHHHSHHHH
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEe-cccc-chh----chhhhc-CCC---CCChhhcchHHHH
Confidence 5544321111 1236789999999999999999332 2221 111 010000 111 12222 366
Q ss_pred HHHhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcHHHHHhccCCHHHHH
Q 038410 757 SAMTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQSEILALGFNEKFIR 806 (850)
Q Consensus 757 ~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~r 806 (850)
+.+.+ +||++.+.+.++.+|.+|+ ...|.+....+||++|+|
T Consensus 170 ~~l~~-aGf~v~~~~~~~~~~~~~~-------~~~w~~~~~~~~~~~f~r 211 (225)
T 3p2e_A 170 AELSN-SGFRIDDVKELDNEYVKQF-------NSLWAKRLAFGRKRSFFR 211 (225)
T ss_dssp HHHHH-HTCEEEEEEEECHHHHTTC-------CSHHHHHHHHSSCCCEEE
T ss_pred HHHHH-cCCCeeeeeecCHHHHHHH-------HHHHhcccCccchhHHHH
Confidence 66665 7999999999999988665 233444445578887765
No 62
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.75 E-value=3.5e-18 Score=175.90 Aligned_cols=165 Identities=12% Similarity=0.122 Sum_probs=127.3
Q ss_pred hcccCchHHHHHhhhhccCCChHHHHHhcCCCcceeecccCC-CCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccH
Q 038410 550 ISRKNTLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKS-EYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGT 628 (850)
Q Consensus 550 ~~~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~-~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~ 628 (850)
.++..+.+.-...+...|+...++|+..+...+..+..-|.. ..-...+...+..+.-...++++++++|||||||+|.
T Consensus 56 vl~~~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~ 135 (298)
T 3fpf_A 56 ILDDAEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLP 135 (298)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSC
T ss_pred HhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccH
Confidence 344456677788899999999999998887766443221100 0011122233444444567889999999999999997
Q ss_pred HH-HHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhhChhhHHHHHHHH
Q 038410 629 LA-IEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENVGHEYIEEFFGCC 707 (850)
Q Consensus 629 ~~-~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~~~~~~~~~ 707 (850)
++ +.+|+.++++|+|||+|++|++.|++++++.|+ ++++++++|+.+++ +++||+|++... + +++..+++++
T Consensus 136 ~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~a~---~--~d~~~~l~el 208 (298)
T 3fpf_A 136 LTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVAAL---A--EPKRRVFRNI 208 (298)
T ss_dssp HHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEECTT---C--SCHHHHHHHH
T ss_pred HHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEECCC---c--cCHHHHHHHH
Confidence 76 555665899999999999999999999999999 79999999999886 578999998654 3 3478999999
Q ss_pred HhccccCeEEEEEE
Q 038410 708 ESLLAEHGLLLLQF 721 (850)
Q Consensus 708 ~r~LkpgG~~~~~~ 721 (850)
.++|||||++++..
T Consensus 209 ~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 209 HRYVDTETRIIYRT 222 (298)
T ss_dssp HHHCCTTCEEEEEE
T ss_pred HHHcCCCcEEEEEc
Confidence 99999999999965
No 63
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.75 E-value=4.8e-18 Score=181.29 Aligned_cols=167 Identities=16% Similarity=0.204 Sum_probs=129.5
Q ss_pred HcCCCCCCeEEEEccCccHHHHHHH--HhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEE
Q 038410 610 KARVNKGLDVLEIGCGWGTLAIEIV--KQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTII 687 (850)
Q Consensus 610 ~l~~~~~~~vLDiGcG~G~~~~~la--~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~ 687 (850)
...++++.+|||||||+|.++..++ ..++++|+|+|+|+++++.|++++...++.++++++++|+.+++.+++||+|+
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 192 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLT 192 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEE
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEE
Confidence 3456889999999999999999995 33788999999999999999999999998888999999999988448999999
Q ss_pred EecchhhhChh-hHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC-------cCccccccccccCCC------CCCCHH
Q 038410 688 SCEMIENVGHE-YIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH-------RLSPGFITEYVFPGG------CLPSLN 753 (850)
Q Consensus 688 s~~~~~~~~~~-~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~p~~------~~~~~~ 753 (850)
++.+++|+++. ....+++++.++|||||++++.++..+....... .....+..+++|+.. .+.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 99999999643 3345899999999999999998876543221111 001112223333221 457899
Q ss_pred HHHHHHhcCCceEEEEeeecCCcH
Q 038410 754 RITSAMTSSSRLCVEHLENIGIHF 777 (850)
Q Consensus 754 ~~~~~~~~~~gf~v~~~~~~~~~y 777 (850)
++.+.+++ +||+++.++....++
T Consensus 273 ~~~~~l~~-aGF~~v~~~~~~~~~ 295 (305)
T 3ocj_A 273 QTRAQLEE-AGFTDLRFEDDRARL 295 (305)
T ss_dssp HHHHHHHH-TTCEEEEEECCTTSS
T ss_pred HHHHHHHH-CCCEEEEEEcccCce
Confidence 99888886 799999988765544
No 64
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.74 E-value=2.2e-18 Score=174.40 Aligned_cols=166 Identities=17% Similarity=0.207 Sum_probs=127.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
...+.+++.+.++++ +|||||||+|.++..++++++++|+|+|+|+++++.|+++++..++.++++++++|+.+++ ++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 445677888888877 9999999999999999998778999999999999999999999999889999999999988 67
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC-----ccccccccccCCCCCCCHHHH
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL-----SPGFITEYVFPGGCLPSLNRI 755 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~p~~~~~~~~~~ 755 (850)
++||+|++..+++|+ +++..++++++++|||||++++.+............. ...|.. .+.+.....+..++
T Consensus 110 ~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 186 (219)
T 3dlc_A 110 NYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKE-FNRKNISQENVERF 186 (219)
T ss_dssp TCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHH-HHHHHSSHHHHHHH
T ss_pred ccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHh-hhhhccccCCHHHH
Confidence 899999999999999 4589999999999999999999765433211000000 001110 00011223356777
Q ss_pred HHHHhcCCceEEEEeee
Q 038410 756 TSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~ 772 (850)
.+.+.+ +||+++++..
T Consensus 187 ~~~l~~-aGf~~v~~~~ 202 (219)
T 3dlc_A 187 QNVLDE-IGISSYEIIL 202 (219)
T ss_dssp HHHHHH-HTCSSEEEEE
T ss_pred HHHHHH-cCCCeEEEEe
Confidence 777765 6998766654
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.74 E-value=2.9e-17 Score=166.25 Aligned_cols=121 Identities=17% Similarity=0.292 Sum_probs=103.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCC----CEEEEEcccC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQD----HIRLYLCDYR 675 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~----~v~~~~~D~~ 675 (850)
...++.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+++++.|++++...++++ +++++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 344556666665577889999999999999999987 33799999999999999999998877765 8999999998
Q ss_pred CCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 676 QMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 676 ~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
..+ ++++||+|++..+++|++++....+++++.++|||||.++...
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 777 5689999999999999987777899999999999999665543
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=6.1e-18 Score=180.05 Aligned_cols=170 Identities=16% Similarity=0.213 Sum_probs=127.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCEEEEEcccCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQ--DHIRLYLCDYRQMPE 679 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~--~~v~~~~~D~~~~~~ 679 (850)
...+.+++.+..+++ +|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...++. ++++++++|+.+++.
T Consensus 70 ~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 344566777765555 9999999999999999998 899999999999999999999876632 589999999999886
Q ss_pred CCCccEEEEe-cchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC--------------ccc------c
Q 038410 680 VKKYDTIISC-EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL--------------SPG------F 738 (850)
Q Consensus 680 ~~~fD~v~s~-~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~--------------~~~------~ 738 (850)
+++||+|++. .+++|+++++...++++++++|||||++++.+............. ... .
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEI 227 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEE
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccE
Confidence 7899988864 678888777789999999999999999999887643210000000 000 0
Q ss_pred ccccccCCC-------------CCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 739 ITEYVFPGG-------------CLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 739 ~~~~i~p~~-------------~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
..-.+++.+ .+.+..++.+.+++ +||+++.++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~-aGF~v~~~~~~~ 275 (299)
T 3g2m_A 228 QEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVR-SGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHH-TTCEEEEEEEEC
T ss_pred EEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHH-CCCEEEEEEecC
Confidence 000111111 14589999888876 799999988765
No 67
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.73 E-value=2.2e-17 Score=166.93 Aligned_cols=121 Identities=16% Similarity=0.255 Sum_probs=104.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCC----CEEEEEcccCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQD----HIRLYLCDYRQ 676 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~----~v~~~~~D~~~ 676 (850)
..++.+++.+...++.+|||||||+|.++..++++ +.++|+|+|+|+++++.|+++++..++++ +++++++|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (217)
T 3jwh_A 16 QRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY 95 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc
Confidence 34456666666678899999999999999999997 34799999999999999999998888765 89999999977
Q ss_pred CC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 677 MP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 677 ~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
.+ +.++||+|++..+++|+++++...+++++.++|||||.+++...
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 96 QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 76 55799999999999999887789999999999999997776443
No 68
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=9.2e-18 Score=184.62 Aligned_cols=184 Identities=16% Similarity=0.132 Sum_probs=127.4
Q ss_pred ceeecccCCCCCCHHHHHHHHHHHHHHHcC----------CCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHH
Q 038410 583 MYSCAIFKSEYEDLDVAQMRKVSLLIEKAR----------VNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQ 650 (850)
Q Consensus 583 ~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~----------~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~ 650 (850)
.++|.+.........+........+++.+. +.++.+|||||||+|.++..+++. ++.+|+|+|+|+++
T Consensus 41 ~~~~~~~~~~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~ 120 (383)
T 4fsd_A 41 TSACKLAAAVPESHRKILADIADEVLEKFYGCGSTLPADGSLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQ 120 (383)
T ss_dssp ---------CCHHHHHHHHTSCHHHHHHCCSCCCCCSCGGGGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred cccccCCCCCCHHHHHHHHHhhHHHHHHhcCCCCccccccCCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHH
Confidence 445555543333333433343345555542 568899999999999999999987 57799999999999
Q ss_pred HHHHHHHHHHc-----C-C-CCCEEEEEcccCCC------C-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeE
Q 038410 651 LKYTETKVKEA-----G-L-QDHIRLYLCDYRQM------P-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGL 716 (850)
Q Consensus 651 ~~~a~~~~~~~-----g-l-~~~v~~~~~D~~~~------~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~ 716 (850)
++.|+++++.. | + ..+++++++|+.++ + ++++||+|+++.+++|+++ +..++++++++|||||+
T Consensus 121 l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~ 198 (383)
T 4fsd_A 121 LEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGE 198 (383)
T ss_dssp HHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCE
Confidence 99999998765 3 2 25899999999886 6 6689999999999999954 79999999999999999
Q ss_pred EEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeee
Q 038410 717 LLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~ 772 (850)
+++.++............ .. ..+........+..++.+.+.+ +||+++.+..
T Consensus 199 l~i~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ll~~-aGF~~v~~~~ 250 (383)
T 4fsd_A 199 LYFSDVYADRRLSEAAQQ-DP--ILYGECLGGALYLEDFRRLVAE-AGFRDVRLVS 250 (383)
T ss_dssp EEEEEEEESSCCCHHHHH-CH--HHHHTTCTTCCBHHHHHHHHHH-TTCCCEEEEE
T ss_pred EEEEEeccccccCHhHhh-hH--HHhhcccccCCCHHHHHHHHHH-CCCceEEEEe
Confidence 999887654321111110 00 0111122345677888887776 7998665443
No 69
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=4.5e-18 Score=177.59 Aligned_cols=171 Identities=19% Similarity=0.201 Sum_probs=121.5
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEec
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCE 690 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~ 690 (850)
.++++.+|||||||+|.++..+++. +++|+|+|+|+++++.|++++ .+...+++++++|+.+++ ++++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 5678999999999999999999997 899999999999999999987 233458999999999988 678999999999
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcC-CCCcC-ccccccccccC---CCCCCCHHHHHHHHhcCCce
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCY-DGHRL-SPGFITEYVFP---GGCLPSLNRITSAMTSSSRL 765 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~-~~~~~-~~~~~~~~i~p---~~~~~~~~~~~~~~~~~~gf 765 (850)
+++|++ ++..+++++.++|||||++++. +..++... ..... ........-+| ....++..++.+.+.+ +||
T Consensus 113 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gf 188 (263)
T 2yqz_A 113 LWHLVP--DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRR-LGL 188 (263)
T ss_dssp CGGGCT--THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHH-TTC
T ss_pred chhhcC--CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHH-cCC
Confidence 999995 4789999999999999999987 32221000 00000 00111111122 1123456777777765 799
Q ss_pred EEEEeeecCCcHHHHHHHHHHHHH
Q 038410 766 CVEHLENIGIHFYQTLRCWRTNLM 789 (850)
Q Consensus 766 ~v~~~~~~~~~y~~tl~~w~~~~~ 789 (850)
+++.++........+...+.+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~ 212 (263)
T 2yqz_A 189 KPRTREVARWREERTPREALEALS 212 (263)
T ss_dssp CCEEEEEEEEEEEECHHHHHHHHH
T ss_pred CcceEEEeeeecCCCHHHHHHHHH
Confidence 977665443333334444444443
No 70
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.73 E-value=2.4e-17 Score=165.80 Aligned_cols=148 Identities=16% Similarity=0.254 Sum_probs=119.5
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
+..++.. ++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.+++++ +++++++|+.+++++++|
T Consensus 34 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~f 103 (211)
T 3e23_A 34 LTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAY 103 (211)
T ss_dssp HHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCE
T ss_pred HHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcE
Confidence 3444444 457889999999999999999998 889999999999999999987 467889999988877899
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSS 763 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 763 (850)
|+|++..+++|++.+++..+++++.++|||||++++............ ...+ ....+..++.+.+.+ +
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~l~~-a 171 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDK-------LARY----YNYPSEEWLRARYAE-A 171 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT-------TSCE----ECCCCHHHHHHHHHH-H
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc-------cchh----ccCCCHHHHHHHHHh-C
Confidence 999999999999877899999999999999999999765433221111 1111 134688899888876 7
Q ss_pred c-eEEEEeeec
Q 038410 764 R-LCVEHLENI 773 (850)
Q Consensus 764 g-f~v~~~~~~ 773 (850)
| |+++.++..
T Consensus 172 G~f~~~~~~~~ 182 (211)
T 3e23_A 172 GTWASVAVESS 182 (211)
T ss_dssp CCCSEEEEEEE
T ss_pred CCcEEEEEEec
Confidence 9 998887653
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.73 E-value=4e-17 Score=169.40 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccC
Q 038410 596 LDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYR 675 (850)
Q Consensus 596 l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~ 675 (850)
+...+......+++.+...++.+|||||||+|.++..+++....+|+|+|+|+.+++.|++++... .+++++++|+.
T Consensus 74 ~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~ 150 (254)
T 1xtp_A 74 VHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASME 150 (254)
T ss_dssp GHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGG
T ss_pred cCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHH
Confidence 344556666788888888889999999999999999999875568999999999999999987543 47999999999
Q ss_pred CCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHH
Q 038410 676 QMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNR 754 (850)
Q Consensus 676 ~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~ 754 (850)
+++ ++++||+|++..+++|++++++..+++++.++|||||++++.+....... +.... .......+..+
T Consensus 151 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~~-~~~~~~~~~~~ 220 (254)
T 1xtp_A 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR---------FLVDK-EDSSLTRSDIH 220 (254)
T ss_dssp GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC---------EEEET-TTTEEEBCHHH
T ss_pred HCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc---------ceecc-cCCcccCCHHH
Confidence 887 66899999999999999887899999999999999999999876433211 11000 01122357888
Q ss_pred HHHHHhcCCceEEEEeeec
Q 038410 755 ITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 755 ~~~~~~~~~gf~v~~~~~~ 773 (850)
+.+.+.+ +||+++.++..
T Consensus 221 ~~~~l~~-aGf~~~~~~~~ 238 (254)
T 1xtp_A 221 YKRLFNE-SGVRVVKEAFQ 238 (254)
T ss_dssp HHHHHHH-HTCCEEEEEEC
T ss_pred HHHHHHH-CCCEEEEeeec
Confidence 8877775 79999887654
No 72
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.73 E-value=5.9e-18 Score=174.11 Aligned_cols=147 Identities=16% Similarity=0.283 Sum_probs=118.6
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecch
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMI 692 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~ 692 (850)
+++.+|||||||+|.++..+++....+|+|+|+|+++++.|++++...+ ..+++++++|+.+++ ++++||+|++..++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 4688999999999999999988755699999999999999999987654 337999999998887 55689999999999
Q ss_pred hhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeee
Q 038410 693 ENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 693 ~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~ 772 (850)
+|++++....+++++.++|||||++++.+....... +... ..+....+..++.+.+.+ +||+++..+.
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~l~~-aGf~~~~~~~ 224 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV---------ILDD--VDSSVCRDLDVVRRIICS-AGLSLLAEER 224 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE---------EEET--TTTEEEEBHHHHHHHHHH-TTCCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc---------eecc--cCCcccCCHHHHHHHHHH-cCCeEEEeee
Confidence 999877678999999999999999999887654310 0000 011223478888887776 7999988876
Q ss_pred c
Q 038410 773 I 773 (850)
Q Consensus 773 ~ 773 (850)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 4
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.72 E-value=1.3e-17 Score=172.37 Aligned_cols=160 Identities=16% Similarity=0.200 Sum_probs=119.7
Q ss_pred HHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 605 SLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
+.+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++... +++++++|+.++.++++|
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~f 104 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRY 104 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcc
Confidence 34444443 357789999999999999999987 77999999999999999988532 799999999888767899
Q ss_pred cEEEEecchhhhChhhHHHHHHHHH-hccccCeEEEEEEecCCCCcC------CCCcCcccccccc-ccCCCCCCCHHHH
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCE-SLLAEHGLLLLQFSSVPDQCY------DGHRLSPGFITEY-VFPGGCLPSLNRI 755 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~-r~LkpgG~~~~~~~~~~~~~~------~~~~~~~~~~~~~-i~p~~~~~~~~~~ 755 (850)
|+|++..+++|++ ++..++++++ ++|||||++++.++....... ........+.... ........+..++
T Consensus 105 D~v~~~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (250)
T 2p7i_A 105 DNIVLTHVLEHID--DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTL 182 (250)
T ss_dssp EEEEEESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHH
T ss_pred cEEEEhhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHH
Confidence 9999999999995 4789999999 999999999998765432100 0000000010000 1122345788899
Q ss_pred HHHHhcCCceEEEEeeec
Q 038410 756 TSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~ 773 (850)
.+.+.+ +||+++.++.+
T Consensus 183 ~~~l~~-~Gf~~~~~~~~ 199 (250)
T 2p7i_A 183 ERDASR-AGLQVTYRSGI 199 (250)
T ss_dssp HHHHHH-TTCEEEEEEEE
T ss_pred HHHHHH-CCCeEEEEeee
Confidence 888776 79999988754
No 74
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.72 E-value=6.3e-17 Score=166.32 Aligned_cols=146 Identities=18% Similarity=0.234 Sum_probs=114.6
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH----------cC------CCCCEEEEEcccC
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKE----------AG------LQDHIRLYLCDYR 675 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~----------~g------l~~~v~~~~~D~~ 675 (850)
.+.++.+|||+|||+|..+..+|++ |++|+|||+|+.+++.|+++... .+ ...+|+++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3467889999999999999999998 99999999999999999876531 00 1248999999999
Q ss_pred CCCC--CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHH
Q 038410 676 QMPE--VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLN 753 (850)
Q Consensus 676 ~~~~--~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~ 753 (850)
+++. .++||+|++..+++|++.+....+++++.++|||||++++.++....... .. | ....+.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----~g---------~-~~~~~~~ 209 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----AG---------P-PFYVPSA 209 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----CC---------S-SCCCCHH
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----CC---------C-CCCCCHH
Confidence 9883 28999999999999998888899999999999999999876655332110 00 1 0124678
Q ss_pred HHHHHHhcCCceEEEEeeecC
Q 038410 754 RITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 754 ~~~~~~~~~~gf~v~~~~~~~ 774 (850)
++.+.+.. +|+++..+...
T Consensus 210 el~~~l~~--~f~v~~~~~~~ 228 (252)
T 2gb4_A 210 ELKRLFGT--KCSMQCLEEVD 228 (252)
T ss_dssp HHHHHHTT--TEEEEEEEEEE
T ss_pred HHHHHhhC--CeEEEEEeccc
Confidence 88777764 59998877543
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.72 E-value=1.6e-16 Score=158.08 Aligned_cols=151 Identities=13% Similarity=0.115 Sum_probs=121.5
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccE
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDT 685 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~ 685 (850)
.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++++..+++ +++++++|+.+++.+++||+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~ 100 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTFDRQYDF 100 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCCCCCEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCCCCCceE
Confidence 5566677778889999999999999999998 899999999999999999999888875 69999999988775678999
Q ss_pred EEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCce
Q 038410 686 IISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRL 765 (850)
Q Consensus 686 v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf 765 (850)
|++..+++|++.+++..+++++.++|||||++++.+....... ... .+.....+.+++.+.+. .|
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~----~~~--------~~~~~~~~~~~l~~~~~---~f 165 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADY----PCT--------VGFPFAFKEGELRRYYE---GW 165 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSS----CCC--------SCCSCCBCTTHHHHHTT---TS
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCc----CCC--------CCCCCccCHHHHHHHhc---CC
Confidence 9999999999877899999999999999999888665433221 000 11123446777766654 28
Q ss_pred EEEEeeec
Q 038410 766 CVEHLENI 773 (850)
Q Consensus 766 ~v~~~~~~ 773 (850)
+++..+..
T Consensus 166 ~~~~~~~~ 173 (199)
T 2xvm_A 166 ERVKYNED 173 (199)
T ss_dssp EEEEEECC
T ss_pred eEEEeccc
Confidence 88876543
No 76
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1e-16 Score=166.90 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=122.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~ 679 (850)
.+....+++.+.++++.+|||||||+|.++..+++. ++++|+|+|+|+++++.++++. .+++++++|+.++++
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~ 92 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKP 92 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCc
Confidence 445567888888889999999999999999999988 5889999999999999999872 378999999998876
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCC-C---cCcccccccc--c-cCCCCCCCH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDG-H---RLSPGFITEY--V-FPGGCLPSL 752 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~-~---~~~~~~~~~~--i-~p~~~~~~~ 752 (850)
+++||+|++..+++|++ ++..++++++++|||||++++............ . .....|.... . .+...+++.
T Consensus 93 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (259)
T 2p35_A 93 AQKADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPP 170 (259)
T ss_dssp SSCEEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCH
T ss_pred cCCcCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCH
Confidence 68999999999999994 589999999999999999999876432211000 0 0000121110 0 113356788
Q ss_pred HHHHHHHhcCCceEEEEee
Q 038410 753 NRITSAMTSSSRLCVEHLE 771 (850)
Q Consensus 753 ~~~~~~~~~~~gf~v~~~~ 771 (850)
.++.+.+.+ +||++...+
T Consensus 171 ~~~~~~l~~-aGf~v~~~~ 188 (259)
T 2p35_A 171 SDYFNALSP-KSSRVDVWH 188 (259)
T ss_dssp HHHHHHHGG-GEEEEEEEE
T ss_pred HHHHHHHHh-cCCceEEEE
Confidence 999888775 799865443
No 77
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.72 E-value=1.3e-16 Score=165.51 Aligned_cols=165 Identities=15% Similarity=0.160 Sum_probs=123.5
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVK 681 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~ 681 (850)
...+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+++++.|+++.. ..+++++++|+.+++ +++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~ 107 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPD 107 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTT
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCC
Confidence 345677777778999999999999999999998 55 99999999999999998864 348999999999988 678
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCc-------CCCCcCccccc-cccccC--------
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQC-------YDGHRLSPGFI-TEYVFP-------- 745 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~i~p-------- 745 (850)
+||+|++..+++|+ +++..++++++++|||||++++......... +........+. ..|...
T Consensus 108 ~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (253)
T 3g5l_A 108 AYNVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFL 185 (253)
T ss_dssp CEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEET
T ss_pred CeEEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeec
Confidence 99999999999999 4589999999999999999999754321000 00000000000 011000
Q ss_pred ----CCCCCCHHHHHHHHhcCCceEEEEeeecCCc
Q 038410 746 ----GGCLPSLNRITSAMTSSSRLCVEHLENIGIH 776 (850)
Q Consensus 746 ----~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 776 (850)
..+..+.+++.+.+.+ +||+++.+++..+.
T Consensus 186 ~~~~~~~~~t~~~~~~~l~~-aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 186 GEDVQKYHRTVTTYIQTLLK-NGFQINSVIEPEPA 219 (253)
T ss_dssp TEEEEEECCCHHHHHHHHHH-TTEEEEEEECCCCC
T ss_pred cccCccEecCHHHHHHHHHH-cCCeeeeeecCCCc
Confidence 0112388999888886 79999999876553
No 78
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=8.6e-17 Score=169.30 Aligned_cols=172 Identities=16% Similarity=0.184 Sum_probs=127.3
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCcc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYD 684 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD 684 (850)
+.+++.+.+.++.+|||||||+|.++..+++ ++++|+|+|+|+++++.++++. .+++++++|+.+++.+++||
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcC
Confidence 3567777888999999999999999999999 5899999999999999999875 37899999999988668999
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC-cccccccc-----ccC-CCCCCCHHHHHH
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL-SPGFITEY-----VFP-GGCLPSLNRITS 757 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----i~p-~~~~~~~~~~~~ 757 (850)
+|++..+++|++ ++..+++++.++|||||++++......... .... ....+.+. -++ ...+++..++.+
T Consensus 120 ~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (279)
T 3ccf_A 120 AVFSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIK--YILEALYNALETLGIHNPQALNPWYFPSIGEYVN 195 (279)
T ss_dssp EEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTH--HHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHH
T ss_pred EEEEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchH--HHHHHHHHHHHhcCCccccCcCceeCCCHHHHHH
Confidence 999999999995 478999999999999999999776533210 0000 00000000 011 124568888888
Q ss_pred HHhcCCceEEEEeeecCC--cH---HHHHHHHHHHH
Q 038410 758 AMTSSSRLCVEHLENIGI--HF---YQTLRCWRTNL 788 (850)
Q Consensus 758 ~~~~~~gf~v~~~~~~~~--~y---~~tl~~w~~~~ 788 (850)
.+.+ +||+++.++.... .+ ...+..|.+.+
T Consensus 196 ~l~~-aGf~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (279)
T 3ccf_A 196 ILEK-QGFDVTYAALFNRPTTLAEGEFGMANWIQMF 230 (279)
T ss_dssp HHHH-HTEEEEEEEEEECCEECSSGGGHHHHHHHHH
T ss_pred HHHH-cCCEEEEEEEecccccccCCHHHHHHHHHHh
Confidence 7775 7999987665432 11 23455665544
No 79
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.71 E-value=6.8e-17 Score=175.06 Aligned_cols=171 Identities=12% Similarity=0.162 Sum_probs=137.3
Q ss_pred HHHHHHHHcCC--CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC
Q 038410 603 KVSLLIEKARV--NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE 679 (850)
Q Consensus 603 ~~~~~~~~l~~--~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~ 679 (850)
....+++.++. +++.+|||||||+|.++..++++ ++.+++++|+| .+++.|++++.+.++.++++++.+|+.+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC
Confidence 34567777777 88899999999999999999998 68899999999 9999999999998988889999999988663
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC-cCccccccccccCCCCCCCHHHHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH-RLSPGFITEYVFPGGCLPSLNRITSA 758 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~p~~~~~~~~~~~~~ 758 (850)
.+.||+|++..+++|+++++...++++++++|||||++++.+...++...... ....++......+++...+..++.+.
T Consensus 230 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l 309 (335)
T 2r3s_A 230 GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESM 309 (335)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHH
T ss_pred CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHH
Confidence 34599999999999998888899999999999999999998887654321111 00111111122346778899999888
Q ss_pred HhcCCceEEEEeeecCC
Q 038410 759 MTSSSRLCVEHLENIGI 775 (850)
Q Consensus 759 ~~~~~gf~v~~~~~~~~ 775 (850)
+.+ +||+++.+..+..
T Consensus 310 l~~-aGf~~~~~~~~~~ 325 (335)
T 2r3s_A 310 FSN-AGFSHSQLHSLPT 325 (335)
T ss_dssp HHH-TTCSEEEEECCTT
T ss_pred HHH-CCCCeeeEEECCC
Confidence 876 7999998877653
No 80
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.71 E-value=2.4e-16 Score=162.16 Aligned_cols=154 Identities=14% Similarity=0.172 Sum_probs=119.7
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~f 683 (850)
+.+.+. ++++.+|||||||+|.++..+++. +++|+|+|+|+++++.++++. ...+++++++|+.+++ ++++|
T Consensus 45 ~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~f 117 (242)
T 3l8d_A 45 PFFEQY--VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQF 117 (242)
T ss_dssp HHHHHH--SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHHH--cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCc
Confidence 344444 357889999999999999999998 899999999999999999874 2348999999999988 67899
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCcccccccccc-CCCCCCCHHHHHHHHhcC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVF-PGGCLPSLNRITSAMTSS 762 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~~~~~~~~~~~~~~~~~ 762 (850)
|+|++..+++|++ ++..++++++++|||||++++.+........ ...+...+-. ......+..++.+.+.+
T Consensus 118 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 189 (242)
T 3l8d_A 118 EAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPR-----ENSYPRLYGKDVVCNTMMPWEFEQLVKE- 189 (242)
T ss_dssp EEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGG-----GGGGGGGGTCCCSSCCCCHHHHHHHHHH-
T ss_pred cEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhh-----hhhhhhhccccccccCCCHHHHHHHHHH-
Confidence 9999999999994 4789999999999999999998865433211 1111111111 12344677888877775
Q ss_pred CceEEEEeeec
Q 038410 763 SRLCVEHLENI 773 (850)
Q Consensus 763 ~gf~v~~~~~~ 773 (850)
+||++++...+
T Consensus 190 ~Gf~~~~~~~~ 200 (242)
T 3l8d_A 190 QGFKVVDGIGV 200 (242)
T ss_dssp TTEEEEEEEEE
T ss_pred cCCEEEEeecc
Confidence 79999987754
No 81
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.70 E-value=1e-17 Score=181.40 Aligned_cols=178 Identities=20% Similarity=0.168 Sum_probs=140.8
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
.+.+++.+.+.++.+|||||||+|.++..+++...++|+|||+|+ +++.|+++++.+++.++++++++|+++++.+++|
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~ 117 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 117 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCce
Confidence 356777788889999999999999999999997445999999995 9999999999999988999999999998744789
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCC------cCCCCcCccccccccccCCCCCCCHHHHHH
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQ------CYDGHRLSPGFITEYVFPGGCLPSLNRITS 757 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~ 757 (850)
|+|+|..+++|+..+.....+.++.++|||||++++...+.... .+.......+|+...++|+..+++..++..
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~ 197 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAV 197 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHH
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHH
Confidence 99999999999987778889999999999999999754332110 010001123455556899999998887743
Q ss_pred HHhcCCce--EEEEeeecCCcHHHHHHHHHH
Q 038410 758 AMTSSSRL--CVEHLENIGIHFYQTLRCWRT 786 (850)
Q Consensus 758 ~~~~~~gf--~v~~~~~~~~~y~~tl~~w~~ 786 (850)
. .+| .+.+.++++.+|..++..|.+
T Consensus 198 ~----~~f~~p~~d~~~~~~~~~~~~~~~~d 224 (348)
T 2y1w_A 198 D----EYFRQPVVDTFDIRILMAKSVKYTVN 224 (348)
T ss_dssp H----HHHTSCEEECCCGGGBCBCCEEEEEE
T ss_pred h----hhccCCeEEeECCeeecCcceEEEEE
Confidence 2 244 477888888899988887763
No 82
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.69 E-value=2.9e-16 Score=169.59 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=132.4
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
...+++.++.+++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++++.+.++.++|++..+|+.+..+. +
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~ 235 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-G 235 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-S
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-C
Confidence 345556666677889999999999999999988 7889999999 999999999999999988999999999732233 8
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcC
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSS 762 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 762 (850)
||+|++..+++|++++....++++++++|||||++++.+...++. .. ....++. .....++...+..++.+.+.+
T Consensus 236 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~-~~~~d~~-~~~~~~~~~~t~~e~~~ll~~- 310 (332)
T 3i53_A 236 AGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HA-GTGMDLR-MLTYFGGKERSLAELGELAAQ- 310 (332)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-CHHHHHH-HHHHHSCCCCCHHHHHHHHHH-
T ss_pred CcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Cc-cHHHHHH-HHhhCCCCCCCHHHHHHHHHH-
Confidence 999999999999998878999999999999999999998876654 11 1111111 112356778899999888876
Q ss_pred CceEEEEeeecCC
Q 038410 763 SRLCVEHLENIGI 775 (850)
Q Consensus 763 ~gf~v~~~~~~~~ 775 (850)
+||+++++...+.
T Consensus 311 aGf~~~~~~~~~~ 323 (332)
T 3i53_A 311 AGLAVRAAHPISY 323 (332)
T ss_dssp TTEEEEEEEECSS
T ss_pred CCCEEEEEEECCC
Confidence 7999998877653
No 83
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.69 E-value=5.4e-17 Score=171.78 Aligned_cols=198 Identities=18% Similarity=0.121 Sum_probs=131.1
Q ss_pred HHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCH---HHHHHHHHHHHHHHcCC--CCCCeEEEEccCccHHHH
Q 038410 557 AQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDL---DVAQMRKVSLLIEKARV--NKGLDVLEIGCGWGTLAI 631 (850)
Q Consensus 557 ~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l---~~aq~~~~~~~~~~l~~--~~~~~vLDiGcG~G~~~~ 631 (850)
....+.++.+||.. ++ ..|...+|..+.... .+.+...++.+.+.+.. .++.+|||||||+|.++.
T Consensus 17 ~~~~~~~~~~y~~~--------~~-~~y~~~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~ 87 (289)
T 2g72_A 17 APGQAAVASAYQRF--------EP-RAYLRNNYAPPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQL 87 (289)
T ss_dssp CHHHHHHHHHGGGC--------CH-HHHHHHHHSTTTTCCSSTTSHHHHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGG
T ss_pred hhHHHHHHHHHhcc--------CH-HHHHHHHhcCcccchhhhhHHHHHHHHHHHHHhCCCCCCCCeEEEECCCcChHHH
Confidence 35567788888841 11 134444444332221 12334444555555432 378899999999999665
Q ss_pred HHHHhcCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCCC------------CEEEEEcccCC-CC---
Q 038410 632 EIVKQTGCKYTGITLSEEQLKYTETKVKEA-----------------GLQD------------HIRLYLCDYRQ-MP--- 678 (850)
Q Consensus 632 ~la~~~~~~v~gid~s~~~~~~a~~~~~~~-----------------gl~~------------~v~~~~~D~~~-~~--- 678 (850)
.+++..+.+|+|+|+|++|++.|++++++. +... .++++++|+.+ ++
T Consensus 88 l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 167 (289)
T 2g72_A 88 LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGA 167 (289)
T ss_dssp TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCS
T ss_pred HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccc
Confidence 555546789999999999999999876421 1100 25788889887 43
Q ss_pred ---CCCCccEEEEecchhhhCh--hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHH
Q 038410 679 ---EVKKYDTIISCEMIENVGH--EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLN 753 (850)
Q Consensus 679 ---~~~~fD~v~s~~~~~~~~~--~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~ 753 (850)
++++||+|+++.+++|+.. +++..++++++++|||||++++....... .+. . ....++ ....+.+
T Consensus 168 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~-~~~---~-----~~~~~~-~~~~~~~ 237 (289)
T 2g72_A 168 GSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES-WYL---A-----GEARLT-VVPVSEE 237 (289)
T ss_dssp SCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC-EEE---E-----TTEEEE-CCCCCHH
T ss_pred cccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc-eEE---c-----CCeeee-eccCCHH
Confidence 2356999999999999654 37899999999999999999997543211 100 0 000111 2346788
Q ss_pred HHHHHHhcCCceEEEEeeecC
Q 038410 754 RITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 754 ~~~~~~~~~~gf~v~~~~~~~ 774 (850)
++.+.+.+ +||+++.++.+.
T Consensus 238 ~l~~~l~~-aGf~~~~~~~~~ 257 (289)
T 2g72_A 238 EVREALVR-SGYKVRDLRTYI 257 (289)
T ss_dssp HHHHHHHH-TTEEEEEEEEEE
T ss_pred HHHHHHHH-cCCeEEEeeEee
Confidence 88888876 799999888765
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.69 E-value=1.6e-16 Score=165.79 Aligned_cols=116 Identities=14% Similarity=0.222 Sum_probs=97.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
...+.+... ++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++.. +++++++|+.+++.++
T Consensus 39 ~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~ 109 (263)
T 3pfg_A 39 DLAALVRRH--SPKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGR 109 (263)
T ss_dssp HHHHHHHHH--CTTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSC
T ss_pred HHHHHHHhh--CCCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccC
Confidence 333444443 346789999999999999999997 8899999999999999998743 7899999999988668
Q ss_pred CccEEEEec-chhhhCh-hhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 682 KYDTIISCE-MIENVGH-EYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 682 ~fD~v~s~~-~~~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
+||+|++.. +++|++. ++...+++++.++|||||++++..+..+.
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 999999998 9999964 46789999999999999999997654443
No 85
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=3.6e-17 Score=170.28 Aligned_cols=152 Identities=16% Similarity=0.169 Sum_probs=120.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
+..+.+++.+.++++.+|||||||+|.++..+++ ++++|+|+|+|+.+++.|+++. +++++++|+.+++ ++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 4556788888888999999999999999999998 4899999999999999887653 7999999999988 67
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccc----c-CCCCCCCHHHH
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYV----F-PGGCLPSLNRI 755 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~-p~~~~~~~~~~ 755 (850)
++||+|++..+++|+ .++..++++++++|| ||++++.++...... ..|...++ . .+..+++..++
T Consensus 93 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
T 3ege_A 93 KSVDGVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQ-------RIWLYDYFPFLWEDALRFLPLDEQI 162 (261)
T ss_dssp TCBSEEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCC-------CCGGGGTCHHHHHHHHTSCCHHHHH
T ss_pred CCEeEEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhH-------HHHHHHHHHHHhhhhhhhCCCHHHH
Confidence 899999999999999 458999999999999 999999887543211 11111111 0 11346677777
Q ss_pred HHHHhcCCceEEEEeeec
Q 038410 756 TSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~ 773 (850)
. .+.+ +||+++.++.+
T Consensus 163 ~-~l~~-aGF~~v~~~~~ 178 (261)
T 3ege_A 163 N-LLQE-NTKRRVEAIPF 178 (261)
T ss_dssp H-HHHH-HHCSEEEEEEC
T ss_pred H-HHHH-cCCCceeEEEe
Confidence 7 6665 79988877665
No 86
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.69 E-value=5.8e-16 Score=169.45 Aligned_cols=166 Identities=14% Similarity=0.147 Sum_probs=135.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
.....+++.++++++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++++.+.++.++|+++.+|+.+..+.
T Consensus 189 ~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~ 267 (369)
T 3gwz_A 189 TEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD 267 (369)
T ss_dssp HHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS
T ss_pred hhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC
Confidence 34567788888888999999999999999999998 7889999999 999999999999999988999999999832243
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHh
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMT 760 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~ 760 (850)
.||+|++..++++++++....++++++++|||||++++.+...++..... ....++ .....+++...+..++.+.++
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~-~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDL-LLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHH-HHHHHHSCCCBCHHHHHHHHH
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhH-HHHhhcCCccCCHHHHHHHHH
Confidence 89999999999999887777999999999999999999998776542211 000111 112335677889999988777
Q ss_pred cCCceEEEEeee
Q 038410 761 SSSRLCVEHLEN 772 (850)
Q Consensus 761 ~~~gf~v~~~~~ 772 (850)
+ +||+++.+..
T Consensus 345 ~-aGf~~~~~~~ 355 (369)
T 3gwz_A 345 K-SGLRVERSLP 355 (369)
T ss_dssp T-TTEEEEEEEE
T ss_pred H-CCCeEEEEEE
Confidence 5 7999998876
No 87
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.69 E-value=1.6e-17 Score=185.51 Aligned_cols=173 Identities=13% Similarity=0.141 Sum_probs=129.1
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCE
Q 038410 588 IFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHI 667 (850)
Q Consensus 588 ~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v 667 (850)
|+......+.+.+.+..+.+++.+.++++.+|||||||+|.++..++++ +.+|+|+|+|+++++.|+++ +++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~ 154 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRT 154 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEEC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcce
Confidence 3333445677888889999999999999999999999999999999997 88999999999999999876 443111
Q ss_pred E-EEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccC
Q 038410 668 R-LYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFP 745 (850)
Q Consensus 668 ~-~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p 745 (850)
. +...|..+++ ++++||+|+++.+++|++ ++..++++++++|||||+++++........ ....|. ....+
T Consensus 155 ~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~-----~~~~~~-~~~~~ 226 (416)
T 4e2x_A 155 DFFEKATADDVRRTEGPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIV-----AKTSFD-QIFDE 226 (416)
T ss_dssp SCCSHHHHHHHHHHHCCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHH-----HHTCGG-GCSTT
T ss_pred eeechhhHhhcccCCCCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhh-----hhcchh-hhhhh
Confidence 1 1223344444 457999999999999995 589999999999999999999765432100 001111 11123
Q ss_pred CCCCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 746 GGCLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
+..+++..++...+.+ +||++++++.+.
T Consensus 227 ~~~~~s~~~l~~ll~~-aGf~~~~~~~~~ 254 (416)
T 4e2x_A 227 HFFLFSATSVQGMAQR-CGFELVDVQRLP 254 (416)
T ss_dssp CCEECCHHHHHHHHHH-TTEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHH-cCCEEEEEEEcc
Confidence 4456788899887775 799999888754
No 88
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.69 E-value=5.9e-17 Score=164.88 Aligned_cols=155 Identities=19% Similarity=0.221 Sum_probs=117.5
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC---C--
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM---P-- 678 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~---~-- 678 (850)
...+++.+...++.+|||||||+|.++..+++. +++|+|+|+|+++++.|+++ .++++.+.|+.++ +
T Consensus 41 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~ 112 (227)
T 3e8s_A 41 DQAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVP 112 (227)
T ss_dssp HHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSC
T ss_pred cHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccc
Confidence 345666666667899999999999999999998 89999999999999999987 2678888888776 3
Q ss_pred CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccc--cC------CCCCC
Q 038410 679 EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYV--FP------GGCLP 750 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~p------~~~~~ 750 (850)
+.++||+|++..+++ . .++..++++++++|||||++++.++.........+. ..|..... +. ...+.
T Consensus 113 ~~~~fD~v~~~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 187 (227)
T 3e8s_A 113 VGKDYDLICANFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQ--DGWREESFAGFAGDWQPMPWYFR 187 (227)
T ss_dssp CCCCEEEEEEESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCS--CEEEEECCTTSSSCCCCEEEEEC
T ss_pred cCCCccEEEECchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccc--cccchhhhhccccCcccceEEEe
Confidence 445699999999999 4 457899999999999999999988765332211111 11111100 01 11356
Q ss_pred CHHHHHHHHhcCCceEEEEeee
Q 038410 751 SLNRITSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 751 ~~~~~~~~~~~~~gf~v~~~~~ 772 (850)
+.+++.+.+.+ +||++++++.
T Consensus 188 ~~~~~~~~l~~-aGf~~~~~~~ 208 (227)
T 3e8s_A 188 TLASWLNALDM-AGLRLVSLQE 208 (227)
T ss_dssp CHHHHHHHHHH-TTEEEEEEEC
T ss_pred cHHHHHHHHHH-cCCeEEEEec
Confidence 89999888876 7999998876
No 89
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.69 E-value=4.8e-16 Score=164.26 Aligned_cols=148 Identities=16% Similarity=0.221 Sum_probs=117.3
Q ss_pred HHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEE
Q 038410 607 LIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTI 686 (850)
Q Consensus 607 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v 686 (850)
+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++++|+.+++.+++||+|
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i 188 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFI 188 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEE
T ss_pred HHHHhhccCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEE
Confidence 334444457889999999999999999998 88999999999999999999999887 899999999988767899999
Q ss_pred EEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceE
Q 038410 687 ISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLC 766 (850)
Q Consensus 687 ~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~ 766 (850)
++..+++|++++....+++++.++|||||.+++......... ... .+.....+..++.+.+. +|+
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----~~~--------~~~~~~~~~~~l~~~~~---~~~ 253 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDV----PCP--------LPFSFTFAENELKEYYK---DWE 253 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSS----CCS--------SCCSCCBCTTHHHHHTT---TSE
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCC----CCC--------CCccccCCHHHHHHHhc---CCE
Confidence 999999999888889999999999999999888655433211 000 01123345666765543 488
Q ss_pred EEEeee
Q 038410 767 VEHLEN 772 (850)
Q Consensus 767 v~~~~~ 772 (850)
+...+.
T Consensus 254 ~~~~~~ 259 (286)
T 3m70_A 254 FLEYNE 259 (286)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877653
No 90
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.68 E-value=8.7e-17 Score=167.43 Aligned_cols=151 Identities=15% Similarity=0.140 Sum_probs=112.7
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCC---------------------------
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGL--------------------------- 663 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl--------------------------- 663 (850)
+..+|.+|||||||+|.++..++.. ++ +|+|+|+|+.|++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 5678899999999999888877766 65 799999999999999988754320
Q ss_pred -CCCEE-EEEcccCCC-C----CCCCccEEEEecchhhhCh--hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC
Q 038410 664 -QDHIR-LYLCDYRQM-P----EVKKYDTIISCEMIENVGH--EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL 734 (850)
Q Consensus 664 -~~~v~-~~~~D~~~~-~----~~~~fD~v~s~~~~~~~~~--~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~ 734 (850)
..+++ ++++|+.+. + ..++||+|+++.+++|+.. +++..++++++++|||||++++..+.... .+ .
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~-~~---~- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP-SY---M- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EE---E-
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc-cc---e-
Confidence 11344 899998874 2 2468999999999999742 46789999999999999999998754321 11 0
Q ss_pred ccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 735 SPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 735 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
.....++ ....+.+++.+.+.+ +||+++.++...
T Consensus 206 ----~g~~~~~-~~~~~~~~l~~~l~~-aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 ----VGKREFS-CVALEKGEVEQAVLD-AGFDIEQLLHSP 239 (263)
T ss_dssp ----ETTEEEE-CCCCCHHHHHHHHHH-TTEEEEEEEEEC
T ss_pred ----eCCeEee-ccccCHHHHHHHHHH-CCCEEEEEeecc
Confidence 0111122 123478888888876 799999988764
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=1.9e-17 Score=169.61 Aligned_cols=160 Identities=12% Similarity=0.041 Sum_probs=113.9
Q ss_pred HhhhhccCCChHHHHHhcCCCcceee---cccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhc
Q 038410 561 RNISHHYDVSNELFSLFLGKSMMYSC---AIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQT 637 (850)
Q Consensus 561 ~~i~~~Yd~~~~~~~~~l~~~~~ys~---~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~ 637 (850)
...+.+|+-++++...|.+..+.|+. .+.......+..-....++.+...+ .+++.+|||||||+|.++..+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~ 82 (236)
T 1zx0_A 4 PSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP 82 (236)
T ss_dssp ----CCSCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC
T ss_pred CCCCCccCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC
Confidence 34556788888888888888877751 1111111111111223333444433 5788999999999999999998763
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC--C-CCCCccEEEE-ecch--hhhChhhHHHHHHHHHhcc
Q 038410 638 GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM--P-EVKKYDTIIS-CEMI--ENVGHEYIEEFFGCCESLL 711 (850)
Q Consensus 638 ~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~--~-~~~~fD~v~s-~~~~--~~~~~~~~~~~~~~~~r~L 711 (850)
..+|+|+|+|++|++.|+++.+..+ .+++++++|+.++ + ++++||+|++ ...+ ......++..++++++++|
T Consensus 83 ~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~L 160 (236)
T 1zx0_A 83 IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLL 160 (236)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhc
Confidence 4599999999999999999987766 4899999999887 5 5689999999 4442 2222345668899999999
Q ss_pred ccCeEEEEEEec
Q 038410 712 AEHGLLLLQFSS 723 (850)
Q Consensus 712 kpgG~~~~~~~~ 723 (850)
||||++++.+..
T Consensus 161 kpgG~l~~~~~~ 172 (236)
T 1zx0_A 161 KPGGVLTYCNLT 172 (236)
T ss_dssp EEEEEEEECCHH
T ss_pred CCCeEEEEEecC
Confidence 999999985543
No 92
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.68 E-value=1.1e-16 Score=168.87 Aligned_cols=116 Identities=21% Similarity=0.336 Sum_probs=102.4
Q ss_pred HHHHHHHc-CCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 604 VSLLIEKA-RVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 604 ~~~~~~~l-~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
++.+++.+ .+.++.+|||||||+|.++..+++. + +++|+|+|+|+.+++.|++++...+. +++++++|+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcC
Confidence 44555554 5678899999999999999999988 4 58999999999999999999887665 899999999998866
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++..+++|++ ++..++++++++|||||++++.++.
T Consensus 88 ~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 7999999999999995 4789999999999999999998765
No 93
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=7.1e-16 Score=156.91 Aligned_cols=123 Identities=20% Similarity=0.346 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccC
Q 038410 596 LDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYR 675 (850)
Q Consensus 596 l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~ 675 (850)
+.+......+.+.+.+ +++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++.+..+ .+++++++|+.
T Consensus 21 ~~~~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~ 95 (227)
T 1ve3_A 21 YRSRIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDAR 95 (227)
T ss_dssp HHHHHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchh
Confidence 3333344444555444 45889999999999999999997 6699999999999999999998776 48999999999
Q ss_pred CCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 676 QMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 676 ~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+++ ++++||+|++..++++....++..+++++.++|||||++++.+..
T Consensus 96 ~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 96 KLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 887 667999999999955555567899999999999999999998775
No 94
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.68 E-value=2.5e-16 Score=171.67 Aligned_cols=165 Identities=13% Similarity=0.126 Sum_probs=134.8
Q ss_pred HHHHHHHcCCCC-CCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--C
Q 038410 604 VSLLIEKARVNK-GLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--E 679 (850)
Q Consensus 604 ~~~~~~~l~~~~-~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~ 679 (850)
+..+++.+++.+ +.+|||||||+|.++..++++ ++.+++++|+ +++++.|++++.+.++.++++++.+|+.+.+ .
T Consensus 167 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 167 MVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 346777777777 899999999999999999998 6789999999 8899999999999999889999999998875 5
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCc-CccccccccccCCCCCCCHHHHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHR-LSPGFITEYVFPGGCLPSLNRITSA 758 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~p~~~~~~~~~~~~~ 758 (850)
++.||+|++..+++|+++++...++++++++|||||++++.+...++....... ...++......+++...+..++.+.
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHH
Confidence 577999999999999998888999999999999999999998877654321110 0111111112467778899999888
Q ss_pred HhcCCceEEEEe
Q 038410 759 MTSSSRLCVEHL 770 (850)
Q Consensus 759 ~~~~~gf~v~~~ 770 (850)
+++ +||+++..
T Consensus 326 l~~-aGf~~~~~ 336 (352)
T 3mcz_A 326 VRD-AGLAVGER 336 (352)
T ss_dssp HHH-TTCEEEEE
T ss_pred HHH-CCCceeee
Confidence 876 79998874
No 95
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.67 E-value=1.9e-16 Score=153.37 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=115.6
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~f 683 (850)
+.+++.+.++++.+|||||||+|.++..+++.. .+|+|+|+|+++++.++++ .+++++.++| .+ ++++|
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~ 76 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSV 76 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCE
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCce
Confidence 356667778899999999999999999999984 5999999999999999988 2389999999 33 56799
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSS 763 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 763 (850)
|+|++..+++|++ ++..+++++.++|||||++++.++......... .+ ....+..++.+.+.
T Consensus 77 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~l~--- 138 (170)
T 3i9f_A 77 DFILFANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKENTGIGP-----PL--------SIRMDEKDYMGWFS--- 138 (170)
T ss_dssp EEEEEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-----CG--------GGCCCHHHHHHHTT---
T ss_pred EEEEEccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCccccccCc-----hH--------hhhcCHHHHHHHHh---
Confidence 9999999999995 579999999999999999999887654422111 11 12357788876654
Q ss_pred ceEEEEeeecCC
Q 038410 764 RLCVEHLENIGI 775 (850)
Q Consensus 764 gf~v~~~~~~~~ 775 (850)
||+++.....+.
T Consensus 139 Gf~~~~~~~~~~ 150 (170)
T 3i9f_A 139 NFVVEKRFNPTP 150 (170)
T ss_dssp TEEEEEEECSST
T ss_pred CcEEEEccCCCC
Confidence 999999887764
No 96
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.67 E-value=1.9e-17 Score=185.62 Aligned_cols=189 Identities=21% Similarity=0.183 Sum_probs=144.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
..+.+++.+...++.+|||||||+|.++..+++.+.++|+|+|+|+ +++.|+++++.+|+.++|+++++|+++++.+++
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 3456677777778899999999999999999987556999999998 999999999999998899999999999774478
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC-----CC-cCCCCcCccccccccccCCCCCCCHHHHH
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP-----DQ-CYDGHRLSPGFITEYVFPGGCLPSLNRIT 756 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~i~p~~~~~~~~~~~ 756 (850)
||+|+|..+++|+..+.....+.++.++|||||++++...... .. .+.+.....+|+.+.+||+..+++..++.
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~ 304 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 304 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHH
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHH
Confidence 9999999999999877778888899999999999986432210 00 00000012344555689999999988774
Q ss_pred HHHhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcHHH
Q 038410 757 SAMTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQSE 794 (850)
Q Consensus 757 ~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~ 794 (850)
.. ...+..+++.++++.+|.+++..|.+......++
T Consensus 305 ~~--~~f~~pvvd~~~~~~~y~~tl~~~~d~~~~~~~~ 340 (480)
T 3b3j_A 305 VD--EYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGD 340 (480)
T ss_dssp HH--HHTTSCEECCCCSTTBCSCCEEEEEETTTCCTTT
T ss_pred HH--hccCCcEEEEeecccccchhhhhhhhhhcCChhh
Confidence 32 1123368888899999999987776655544333
No 97
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=3e-16 Score=168.01 Aligned_cols=171 Identities=11% Similarity=0.095 Sum_probs=124.4
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcC------CCCCEEEEEcccCCCC-------CC
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAG------LQDHIRLYLCDYRQMP-------EV 680 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~g------l~~~v~~~~~D~~~~~-------~~ 680 (850)
+++.+|||||||+|.++..+++..+.+|+|+|+|+++++.|+++....+ ...+++++++|+.+++ ++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4788999999999999999998767899999999999999999987642 2347999999998864 24
Q ss_pred CCccEEEEecchhhh--ChhhHHHHHHHHHhccccCeEEEEEEecCCC----------Cc---------CCCCcCccccc
Q 038410 681 KKYDTIISCEMIENV--GHEYIEEFFGCCESLLAEHGLLLLQFSSVPD----------QC---------YDGHRLSPGFI 739 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~--~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~----------~~---------~~~~~~~~~~~ 739 (850)
++||+|++..+++|+ ..+++..+++++.++|||||.+++.++.... .. +........+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999997 4456789999999999999999998764210 00 00001112223
Q ss_pred cccccCC-------CCCCCHHHHHHHHhcCCceEEEEeeecCCcHHHHHHHHH
Q 038410 740 TEYVFPG-------GCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWR 785 (850)
Q Consensus 740 ~~~i~p~-------~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~ 785 (850)
.+|-|.- ..+.+..++.+.+.+ .||+++...++...+..+...|+
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~-~G~~~v~~~~f~~~g~~~~~~~r 244 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKK-YNMKLVYKKTFLEFYEEKIKNNE 244 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGG-GTEEEEEEEEHHHHHHHHTTSHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHH-cCcEEEEecCHHHHHHHhccchh
Confidence 3333311 123566777666664 79999999888766666655444
No 98
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.67 E-value=4e-16 Score=160.87 Aligned_cols=107 Identities=24% Similarity=0.372 Sum_probs=96.3
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEec-ch
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCE-MI 692 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~-~~ 692 (850)
.++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++....++ +++++++|+.+++..++||+|++.. ++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKFDLITCCLDST 112 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCEEEEEECTTGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCceEEEEcCccc
Confidence 37789999999999999999997 88999999999999999999988776 7999999999887448999999998 99
Q ss_pred hhhCh-hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 693 ENVGH-EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 693 ~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+|++. +++..++++++++|||||++++....
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99943 57899999999999999999986543
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.67 E-value=1.3e-17 Score=168.62 Aligned_cols=180 Identities=12% Similarity=0.126 Sum_probs=123.6
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHH----HHcCCCCCEEEEEcccCCCC-C
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKV----KEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~----~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
..++.+.++++.+|||||||+|.++..+++. ++++|+|+|+|++|++.+.+++ ...+++ +++++++|+.+++ +
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~ 96 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPL 96 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSC
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCC
Confidence 3455566788999999999999999999998 5899999999999888643333 345554 8999999999988 4
Q ss_pred CCCccEEEEec---ch--hhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCC-CHH
Q 038410 680 VKKYDTIISCE---MI--ENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLP-SLN 753 (850)
Q Consensus 680 ~~~fD~v~s~~---~~--~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~-~~~ 753 (850)
+++ |.|+... .. +|+++ +..++++++++|||||++++........ ....... -.|..... ...
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~ 165 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAWR------PSVPEVG--EHPEPTPDSADE 165 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGBT------TBCGGGT--TCCCCCHHHHHH
T ss_pred CCC-CEEEEEccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEecccccc------ccccccc--cCCccchHHHHH
Confidence 455 7776443 22 26643 5899999999999999999954321110 0000000 11111100 122
Q ss_pred HHHHHHhcCCceEEEEeeecCCcHHHHH-HHHHHHHHhcHHHHHhc
Q 038410 754 RITSAMTSSSRLCVEHLENIGIHFYQTL-RCWRTNLMEKQSEILAL 798 (850)
Q Consensus 754 ~~~~~~~~~~gf~v~~~~~~~~~y~~tl-~~w~~~~~~~~~~~~~~ 798 (850)
.+...+.+ +||++.+++.+..++..++ ..|.++|...++++..+
T Consensus 166 ~l~~~l~~-aGf~i~~~~~~~~~~~~~~~~~w~~~~~~~r~~~~~~ 210 (218)
T 3mq2_A 166 WLAPRYAE-AGWKLADCRYLEPEEVAGLETSWTRRLHSSRDRFDVL 210 (218)
T ss_dssp HHHHHHHH-TTEEEEEEEEECHHHHHHTCCTHHHHHTTCCSSCSEE
T ss_pred HHHHHHHH-cCCCceeeeccchhhhhhhHHHHHHHHcccccceeeE
Confidence 34445554 7999999999988887555 78999988776655433
No 100
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.67 E-value=4.4e-16 Score=171.30 Aligned_cols=167 Identities=17% Similarity=0.153 Sum_probs=130.6
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
+.+++.++++++.+|||||||+|.++..+++. ++++++++|+ +++++.|++++...++.++++++.+|+.+..+ ..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP-VTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-CCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-CCC
Confidence 46777778888999999999999999999998 6789999999 99999999999999998899999999876223 349
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe--cCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS--SVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
|+|++..+++|++++....++++++++|||||++++.++ ..++..........++ ....++++...+..++.+.+.+
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~ 328 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDL-RMLTFMGGRVRTRDEVVDLAGS 328 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHH-HHHHHHSCCCCCHHHHHHHHHT
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcch-HHHHhCCCcCCCHHHHHHHHHH
Confidence 999999999999887667999999999999999999887 5443211000000111 1112356778899999888775
Q ss_pred CCceEEEEeeecCC
Q 038410 762 SSRLCVEHLENIGI 775 (850)
Q Consensus 762 ~~gf~v~~~~~~~~ 775 (850)
+||+++.+...+.
T Consensus 329 -aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 329 -AGLALASERTSGS 341 (374)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CCCceEEEEECCC
Confidence 7999998877654
No 101
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=2.7e-16 Score=160.95 Aligned_cols=158 Identities=16% Similarity=0.211 Sum_probs=120.8
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEEcccCCCC-CCCCccEEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGL----QDHIRLYLCDYRQMP-EVKKYDTII 687 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl----~~~v~~~~~D~~~~~-~~~~fD~v~ 687 (850)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ .++++++++|+.+++ ++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 458899999999999999999998 89999999999999999999887776 346899999999988 678999999
Q ss_pred EecchhhhCh-hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCc-----------Ccccccccccc-----CCCCCC
Q 038410 688 SCEMIENVGH-EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHR-----------LSPGFITEYVF-----PGGCLP 750 (850)
Q Consensus 688 s~~~~~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~-----p~~~~~ 750 (850)
+..+++|+++ +....+++++.++|||||++++.++....... .+. ....+...... ......
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK-LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH-HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH-HHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 9999999964 23448999999999999999998876432110 000 00001100000 001356
Q ss_pred CHHHHHHHHhcCCceEEEEeeec
Q 038410 751 SLNRITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 751 ~~~~~~~~~~~~~gf~v~~~~~~ 773 (850)
+.+++.+.+++ +||+++.++..
T Consensus 186 ~~~~l~~ll~~-aGf~~~~~~~~ 207 (235)
T 3sm3_A 186 TEKELVFLLTD-CRFEIDYFRVK 207 (235)
T ss_dssp CHHHHHHHHHT-TTEEEEEEEEE
T ss_pred CHHHHHHHHHH-cCCEEEEEEec
Confidence 88999887775 79999987653
No 102
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.67 E-value=8.1e-16 Score=163.56 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=99.7
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCEEEEEcccCCCC-CC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEA-GLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-gl~~~v~~~~~D~~~~~-~~ 680 (850)
+.+.+. ..+++.+|||||||+|.++..+++. ++++|+|+|+|+.+++.|+++++.. +...+++++++|+.+++ ++
T Consensus 27 ~~l~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 105 (299)
T 3g5t_A 27 KMIDEY-HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG 105 (299)
T ss_dssp HHHHHH-CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC
T ss_pred HHHHHH-hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc
Confidence 334333 3468899999999999999999973 5899999999999999999999887 55669999999999987 44
Q ss_pred ------CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 ------KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ------~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++..+++|+ ++..+++++.++|||||.+++.++.
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 799999999999999 4799999999999999999996554
No 103
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.67 E-value=5.7e-16 Score=155.44 Aligned_cols=155 Identities=21% Similarity=0.245 Sum_probs=115.4
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEM 691 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~ 691 (850)
.+++.+|||||||+|.++..++...+++|+|+|+|+++++.|++++...+. +++++++|+.+++ ++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCCCCCceeEEEEcCh
Confidence 467889999999999985444444589999999999999999999887663 7899999999988 6789999999999
Q ss_pred hhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccc--ccc-ccccC-CCCCCCHHHHHHHHhcCCceEE
Q 038410 692 IENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPG--FIT-EYVFP-GGCLPSLNRITSAMTSSSRLCV 767 (850)
Q Consensus 692 ~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~--~~~-~~i~p-~~~~~~~~~~~~~~~~~~gf~v 767 (850)
++|++.+++..++++++++|||||++++.+++.++..+........ +.. ....| ...+.+.+++.+.+. ..||..
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~g~~~ 177 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFK-DMKVLF 177 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTT-TSEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHh-hcCcee
Confidence 9999877899999999999999999999988765543221100000 000 00001 113457777766665 468866
Q ss_pred EEe
Q 038410 768 EHL 770 (850)
Q Consensus 768 ~~~ 770 (850)
.+.
T Consensus 178 ~~~ 180 (209)
T 2p8j_A 178 KED 180 (209)
T ss_dssp EEE
T ss_pred eee
Confidence 544
No 104
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.66 E-value=1.2e-15 Score=152.08 Aligned_cols=149 Identities=16% Similarity=0.193 Sum_probs=117.4
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCcc
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYD 684 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD 684 (850)
.++.. ++++ +|||||||+|.++..+++. +++|+|+|+|+++++.|+++....++ +++++++|+.+++ ++++||
T Consensus 23 ~~~~~--~~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD 96 (202)
T 2kw5_A 23 SVANQ--IPQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWE 96 (202)
T ss_dssp HHHHH--SCSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCS
T ss_pred HHHHh--CCCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCcc
Confidence 34444 3567 9999999999999999997 88999999999999999999988776 7999999999887 668999
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCc
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSR 764 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 764 (850)
+|+++ +.|++.++...+++++.++|||||++++.+.......+.... . ......++..++.+.+. |
T Consensus 97 ~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~l~~~l~---G 162 (202)
T 2kw5_A 97 GIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGG---P------KDLDLLPKLETLQSELP---S 162 (202)
T ss_dssp EEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCC---S------SSGGGCCCHHHHHHHCS---S
T ss_pred EEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCC---C------CcceeecCHHHHHHHhc---C
Confidence 99996 456666778999999999999999999988765443211000 0 01124578888877654 9
Q ss_pred eEEEEeeecC
Q 038410 765 LCVEHLENIG 774 (850)
Q Consensus 765 f~v~~~~~~~ 774 (850)
|+++..+...
T Consensus 163 f~v~~~~~~~ 172 (202)
T 2kw5_A 163 LNWLIANNLE 172 (202)
T ss_dssp SCEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9998877653
No 105
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=3.9e-16 Score=157.58 Aligned_cols=115 Identities=19% Similarity=0.227 Sum_probs=100.9
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCcc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYD 684 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD 684 (850)
+.+...+...++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...+ +++++++|+.+++++++||
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD 116 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFSTAELFD 116 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCCSCCEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCCCCCcc
Confidence 34445667788899999999999999999997 7899999999999999999876533 8999999999988778999
Q ss_pred EEEEecchhhhCh-hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 685 TIISCEMIENVGH-EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 685 ~v~s~~~~~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+|++..+++|+++ +....+++++.++|||||.+++.+..
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999999999975 45578899999999999999997654
No 106
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.66 E-value=6.9e-16 Score=158.82 Aligned_cols=163 Identities=18% Similarity=0.257 Sum_probs=121.2
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCc
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKY 683 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~f 683 (850)
.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+++++.|+++... .+++++++|+.+++ ++++|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCc
Confidence 4666677778999999999999999999998 77 999999999999999987542 37999999999887 56899
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCC--CcCCCCc--C-c-ccc-ccccc---------c--C
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPD--QCYDGHR--L-S-PGF-ITEYV---------F--P 745 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~--~~~~~~~--~-~-~~~-~~~~i---------~--p 745 (850)
|+|++..+++|++ ++..+++++.++|||||++++....... .....+. . . ..+ +..|. + +
T Consensus 109 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 109 DLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred eEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 9999999999995 5799999999999999999997753210 0000000 0 0 000 01110 0 0
Q ss_pred -CCCCCCHHHHHHHHhcCCceEEEEeeecCCc
Q 038410 746 -GGCLPSLNRITSAMTSSSRLCVEHLENIGIH 776 (850)
Q Consensus 746 -~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 776 (850)
.....+..++.+.+.+ +||+++.++.....
T Consensus 187 ~~~~~~t~~~~~~~l~~-aGF~~~~~~~~~~~ 217 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIR-SGFAIEHVEEFCPT 217 (243)
T ss_dssp CCEEECCHHHHHHHHHH-TTCEEEEEEECCCC
T ss_pred eEEEeccHHHHHHHHHH-cCCEeeeeccCCCc
Confidence 0122478888887775 79999999876553
No 107
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.66 E-value=5e-16 Score=169.58 Aligned_cols=157 Identities=13% Similarity=0.139 Sum_probs=124.7
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC--CCCCCccEEEEec
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM--PEVKKYDTIISCE 690 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~--~~~~~fD~v~s~~ 690 (850)
.++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++++++.++.++|+++.+|+.+. +.+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 45679999999999999999998 7889999999 999999999999888888999999999885 3237899999999
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccc----cccCCCCCCCHHHHHHHHhcCCceE
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITE----YVFPGGCLPSLNRITSAMTSSSRLC 766 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~p~~~~~~~~~~~~~~~~~~gf~ 766 (850)
+++++++++...++++++++|||||++++.+...++............... ....++...+..++.+.+.+ +||+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~-AGf~ 335 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIEN-AGLE 335 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHT-TTEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHH-cCCe
Confidence 999999888889999999999999999999877655322110000000111 11234557789999887775 7999
Q ss_pred EEEeee
Q 038410 767 VEHLEN 772 (850)
Q Consensus 767 v~~~~~ 772 (850)
++.+..
T Consensus 336 ~v~~~~ 341 (363)
T 3dp7_A 336 VEEIQD 341 (363)
T ss_dssp ESCCCC
T ss_pred EEEEEe
Confidence 887764
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.66 E-value=1e-15 Score=153.09 Aligned_cols=161 Identities=19% Similarity=0.197 Sum_probs=119.5
Q ss_pred HHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHH
Q 038410 572 ELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQL 651 (850)
Q Consensus 572 ~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~ 651 (850)
+.+..++++.+.|+++.. .......+.+... ++++.+|||||||+|.++..+++.+..+|+|+|+|++++
T Consensus 27 ~~~~~~~~~~~~f~~~~~--------~~~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~ 96 (205)
T 3grz_A 27 DQEIIRLDPGLAFGTGNH--------QTTQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESM 96 (205)
T ss_dssp TCEEEEESCC-----CCH--------HHHHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred CceeEEecCCcccCCCCC--------ccHHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH
Confidence 334566777777765532 1122222333222 568899999999999999999987445999999999999
Q ss_pred HHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCC
Q 038410 652 KYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDG 731 (850)
Q Consensus 652 ~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~ 731 (850)
+.|+++++..++.+ +++.++|+.+.. +++||+|++..+++++ ..+++++.++|||||++++.++...
T Consensus 97 ~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~fD~i~~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~------ 163 (205)
T 3grz_A 97 TAAEENAALNGIYD-IALQKTSLLADV-DGKFDLIVANILAEIL-----LDLIPQLDSHLNEDGQVIFSGIDYL------ 163 (205)
T ss_dssp HHHHHHHHHTTCCC-CEEEESSTTTTC-CSCEEEEEEESCHHHH-----HHHGGGSGGGEEEEEEEEEEEEEGG------
T ss_pred HHHHHHHHHcCCCc-eEEEeccccccC-CCCceEEEECCcHHHH-----HHHHHHHHHhcCCCCEEEEEecCcc------
Confidence 99999999998874 999999998764 4789999999888775 7899999999999999999665421
Q ss_pred CcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCC
Q 038410 732 HRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGI 775 (850)
Q Consensus 732 ~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 775 (850)
+..++.+.+.+ +||+++.....+.
T Consensus 164 -------------------~~~~~~~~~~~-~Gf~~~~~~~~~~ 187 (205)
T 3grz_A 164 -------------------QLPKIEQALAE-NSFQIDLKMRAGR 187 (205)
T ss_dssp -------------------GHHHHHHHHHH-TTEEEEEEEEETT
T ss_pred -------------------cHHHHHHHHHH-cCCceEEeeccCC
Confidence 24556566665 6999988766543
No 109
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.66 E-value=5.9e-16 Score=157.81 Aligned_cols=175 Identities=16% Similarity=0.250 Sum_probs=130.0
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC--C-CCCC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM--P-EVKK 682 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~--~-~~~~ 682 (850)
.+++.+. .++.+|||||||+|.++..+++. +.+|+|+|+|+++++.++++. .++.++|+.+. + ++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 4555555 67889999999999999999998 799999999999999998753 37889998873 3 5589
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccc---ccccc-CCCCCCCHHHHHHH
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFI---TEYVF-PGGCLPSLNRITSA 758 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~-p~~~~~~~~~~~~~ 758 (850)
||+|++..+++|+++ +..+++++.++|||||.+++..................|. ..... ......+..++.+.
T Consensus 94 fD~v~~~~~l~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFD--PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp EEEEEEESCGGGSSC--HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred cCEEEECChhhhcCC--HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999999954 6899999999999999999987653221000000000010 00001 12245688999888
Q ss_pred HhcCCceEEEEeeecCCcHHHHHHHHHHHHHhcHHH
Q 038410 759 MTSSSRLCVEHLENIGIHFYQTLRCWRTNLMEKQSE 794 (850)
Q Consensus 759 ~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~ 794 (850)
+.+ +||+++.++.+..++ .+...|.+++.....+
T Consensus 172 l~~-~Gf~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 205 (230)
T 3cc8_A 172 FLK-AGYSISKVDRVYVDH-KMYEPLIEELYGICKK 205 (230)
T ss_dssp HHH-TTEEEEEEEEEECCC-GGGHHHHHHHHHHHHH
T ss_pred HHH-cCCeEEEEEecccCh-hhccchHHHHHHHHHh
Confidence 776 799999999887776 6778888877765553
No 110
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.65 E-value=2.2e-15 Score=164.53 Aligned_cols=165 Identities=15% Similarity=0.180 Sum_probs=132.6
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
..+.+++.++++++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++++++.+++++++++.+|+.+.+..
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 255 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP- 255 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-
Confidence 3457788888888999999999999999999998 6789999999 999999999999999988899999999887632
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccc--cCCCCC----CCHHHH
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYV--FPGGCL----PSLNRI 755 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~p~~~~----~~~~~~ 755 (850)
.+|+|++..+++|+++++...++++++++|||||++++.+...++...... ..+. .++ ..++.. .+..++
T Consensus 256 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~-~~~~~~~~g~~~~~~~t~~e~ 331 (359)
T 1x19_A 256 EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNF---DYLS-HYILGAGMPFSVLGFKEQARY 331 (359)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCH---HHHH-HHGGGGGSSCCCCCCCCGGGH
T ss_pred CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchH---HHHH-HHHHhcCCCCcccCCCCHHHH
Confidence 349999999999998888899999999999999999998887655311111 0111 111 222333 788899
Q ss_pred HHHHhcCCceEEEEeeecC
Q 038410 756 TSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~~ 774 (850)
.+.+.+ +||+++.+..++
T Consensus 332 ~~ll~~-aGf~~v~~~~~~ 349 (359)
T 1x19_A 332 KEILES-LGYKDVTMVRKY 349 (359)
T ss_dssp HHHHHH-HTCEEEEEEEET
T ss_pred HHHHHH-CCCceEEEEecC
Confidence 888876 799998887654
No 111
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.65 E-value=1.9e-15 Score=155.00 Aligned_cols=106 Identities=19% Similarity=0.296 Sum_probs=92.4
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEe-cch
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISC-EMI 692 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~-~~~ 692 (850)
.++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++. .+++++++|+.+++.+++||+|++. .++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 67889999999999999999998 569999999999999999874 2689999999988766789999964 599
Q ss_pred hhhCh-hhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 693 ENVGH-EYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 693 ~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
+|+.+ ++...++++++++|||||++++.+...+.
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 99954 56889999999999999999997665543
No 112
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.65 E-value=1.1e-15 Score=167.20 Aligned_cols=166 Identities=19% Similarity=0.267 Sum_probs=132.4
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
+.+++.++++++.+|||||||+|.++..++++ ++++++++|+ +++++.|++++...++.++++++.+|+.+..+ ..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCc
Confidence 46777888888999999999999999999988 6789999999 99999999999999998899999999876223 359
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec-CCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS-VPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSS 762 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 762 (850)
|+|++..+++|+++++...++++++++|||||++++.+.. .++.....+....++ .....+++...+.+++.+.+.+
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~e~~~ll~~- 328 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDL-RMLVFLGGALRTREKWDGLAAS- 328 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHH-HHHHHHSCCCCBHHHHHHHHHH-
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccH-HHhhhcCCcCCCHHHHHHHHHH-
Confidence 9999999999998877789999999999999999998876 443211111000011 1112346777899999888876
Q ss_pred CceEEEEeeecC
Q 038410 763 SRLCVEHLENIG 774 (850)
Q Consensus 763 ~gf~v~~~~~~~ 774 (850)
+||+++.+...+
T Consensus 329 aGf~~~~~~~~~ 340 (360)
T 1tw3_A 329 AGLVVEEVRQLP 340 (360)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCeEEEEEeCC
Confidence 799999887764
No 113
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.65 E-value=1.7e-16 Score=163.39 Aligned_cols=109 Identities=13% Similarity=0.173 Sum_probs=93.7
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKK 682 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~ 682 (850)
++.+.+.. ..+.+|||||||+|.++..++++ +.+|+|||+|++|++.|+++ .+++++++|+++++ ++++
T Consensus 30 ~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~s 99 (257)
T 4hg2_A 30 FRWLGEVA--PARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPAS 99 (257)
T ss_dssp HHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSC
T ss_pred HHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCc
Confidence 34555554 34569999999999999999987 89999999999999887642 38999999999998 7899
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
||+|++..++||+. ++.++++++|+|||||++++.....+
T Consensus 100 fD~v~~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 100 VDVAIAAQAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEEECSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ccEEEEeeehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999884 57899999999999999999776543
No 114
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.64 E-value=1.6e-15 Score=149.06 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=91.4
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCCccEEEEe
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKKYDTIISC 689 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~fD~v~s~ 689 (850)
.++++++|||||||+|.++..++++ +.+|+|+|+|+++++.|++++++.++ +++++++.|..+++ .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4678999999999999999999998 99999999999999999999999988 58999998887753 45789999987
Q ss_pred c-chhhh------ChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 690 E-MIENV------GHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 690 ~-~~~~~------~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
. .+.+- ..+....+++++.++|||||++++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3 33320 1245678899999999999999997654
No 115
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.64 E-value=8.4e-16 Score=166.24 Aligned_cols=167 Identities=11% Similarity=0.135 Sum_probs=132.1
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
....+++.+++++ .+|||||||+|.++..++++ ++.+++++|+ +++++.|++++.+.++.++++++.+|+.+ +.++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 232 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPS 232 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCS
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCC
Confidence 3456777777777 89999999999999999988 6889999999 99999999998888887799999999877 4236
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+||+|++..+++|++++....++++++++|||||++++.+...++..........++. .....++...+..++.+.+++
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVH-LFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHH-HHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhH-hHhhCCCcCCCHHHHHHHHHH
Confidence 8999999999999988777899999999999999999998876543211110001111 111234666789999888876
Q ss_pred CCceEEEEeeecC
Q 038410 762 SSRLCVEHLENIG 774 (850)
Q Consensus 762 ~~gf~v~~~~~~~ 774 (850)
+||+++.+...+
T Consensus 312 -aGf~~~~~~~~~ 323 (334)
T 2ip2_A 312 -GGFAVERIVDLP 323 (334)
T ss_dssp -TTEEEEEEEEET
T ss_pred -CCCceeEEEECC
Confidence 799998887654
No 116
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.64 E-value=5.7e-16 Score=155.76 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=89.9
Q ss_pred CCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC----CCCCCccEEEEe
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM----PEVKKYDTIISC 689 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~----~~~~~fD~v~s~ 689 (850)
++.+|||||||+|.++..+|+. ++++|+|||+|+++++.|++++++.++. +++++++|+.++ -++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5779999999999999999988 6789999999999999999999999886 699999998874 256899999998
Q ss_pred cchhhhChhhH------HHHHHHHHhccccCeEEEEEE
Q 038410 690 EMIENVGHEYI------EEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 690 ~~~~~~~~~~~------~~~~~~~~r~LkpgG~~~~~~ 721 (850)
....+...... +.+++++.++|||||.+++.+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 55443322221 369999999999999999865
No 117
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=2.7e-15 Score=149.50 Aligned_cols=111 Identities=13% Similarity=0.162 Sum_probs=98.7
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CCCCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~~~~~f 683 (850)
..+++.+.++++++|||||||+|.++..+++. +++|+|+|+|+++++.|+++++..|++++++++++|+.+ ++..++|
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 46778888999999999999999999999998 999999999999999999999999998789999999988 4444689
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
|+|++...+ +.. +++++.++|||||++++..++
T Consensus 124 D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 124 EAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 999988744 245 999999999999999996654
No 118
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.63 E-value=7.6e-15 Score=150.96 Aligned_cols=114 Identities=25% Similarity=0.449 Sum_probs=98.1
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
..+.+.+.+ +++.+|||||||+|.++..+++. .+|+|+|+|+++++.|++++...+. +++++++|+.+++..++
T Consensus 23 ~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 96 (243)
T 3d2l_A 23 WVAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELELPEP 96 (243)
T ss_dssp HHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCCSSC
T ss_pred HHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCCCCC
Confidence 334555554 56789999999999999999986 8999999999999999999987663 79999999998874589
Q ss_pred ccEEEEec-chhhh-ChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 683 YDTIISCE-MIENV-GHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 683 fD~v~s~~-~~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
||+|++.. +++|+ ..+++..+++++.++|||||++++...
T Consensus 97 fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 97 VDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 99999986 99998 445788999999999999999998654
No 119
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.63 E-value=8.6e-16 Score=160.36 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=115.8
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCC---------------------------
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGL--------------------------- 663 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl--------------------------- 663 (850)
+..++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 5567889999999999999999887 55 999999999999999998764321
Q ss_pred -CCCE-EEEEcccCCCC--CC---CCccEEEEecchhhhCh--hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC
Q 038410 664 -QDHI-RLYLCDYRQMP--EV---KKYDTIISCEMIENVGH--EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL 734 (850)
Q Consensus 664 -~~~v-~~~~~D~~~~~--~~---~~fD~v~s~~~~~~~~~--~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~ 734 (850)
.+++ +++++|+.+.. ++ ++||+|++..+++|+.. +++..+++++.++|||||++++.+..... .+ ..
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~---~~ 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YY---MI 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EE---EE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eE---Ec
Confidence 0128 99999998864 34 78999999999996543 36899999999999999999998754321 10 00
Q ss_pred ccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCCcH
Q 038410 735 SPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHF 777 (850)
Q Consensus 735 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y 777 (850)
. ...++ ....+.+++.+.+.+ +||+++.++....+|
T Consensus 208 -~----~~~~~-~~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~ 243 (265)
T 2i62_A 208 -G----EQKFS-SLPLGWETVRDAVEE-AGYTIEQFEVISQNY 243 (265)
T ss_dssp -T----TEEEE-CCCCCHHHHHHHHHH-TTCEEEEEEEECCCC
T ss_pred -C----Ccccc-ccccCHHHHHHHHHH-CCCEEEEEEEecccC
Confidence 0 00011 123467788887775 799999988765443
No 120
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.63 E-value=1.2e-15 Score=165.73 Aligned_cols=163 Identities=13% Similarity=0.210 Sum_probs=125.6
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
.+.+++.++++++.+|||||||+|.++..++++ ++.+++++|++ +++. +++.+..++.++|+++.+|+.+..+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVP--H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCC--C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCC--C
Confidence 457788888889999999999999999999998 67899999994 4444 4444445677789999999963223 8
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcC
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSS 762 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 762 (850)
||+|++..+++|+++++...++++++++|||||++++.+...++..........++ ......++...+..++.+.+.+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~-~~~~~~~~~~~t~~e~~~ll~~- 325 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDF-MMLAARTGQERTAAELEPLFTA- 325 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHH-HHHHTTSCCCCBHHHHHHHHHH-
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcCh-hhhhcCCCcCCCHHHHHHHHHH-
Confidence 99999999999999877789999999999999999999887665421111111111 1112356778899999888876
Q ss_pred CceEEEEeeec
Q 038410 763 SRLCVEHLENI 773 (850)
Q Consensus 763 ~gf~v~~~~~~ 773 (850)
+||+++++...
T Consensus 326 aGf~~~~~~~~ 336 (348)
T 3lst_A 326 AGLRLDRVVGT 336 (348)
T ss_dssp TTEEEEEEEEC
T ss_pred CCCceEEEEEC
Confidence 79999988763
No 121
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.63 E-value=2.7e-16 Score=166.58 Aligned_cols=147 Identities=21% Similarity=0.266 Sum_probs=104.4
Q ss_pred CCCCCeEEEEccCccHHHHHH----HHh-cCCEE--EEEeCCHHHHHHHHHHHHHc-CCCCCEEE--EEcccCCCC----
Q 038410 613 VNKGLDVLEIGCGWGTLAIEI----VKQ-TGCKY--TGITLSEEQLKYTETKVKEA-GLQDHIRL--YLCDYRQMP---- 678 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~l----a~~-~~~~v--~gid~s~~~~~~a~~~~~~~-gl~~~v~~--~~~D~~~~~---- 678 (850)
.+++.+|||||||+|.++..+ +.+ ++++| +|+|+|++|++.|++++... +++ ++++ ..+|..+++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhc
Confidence 367789999999999876543 333 46654 99999999999999998754 443 5554 455554432
Q ss_pred ---CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccc--cC---CCCCC
Q 038410 679 ---EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYV--FP---GGCLP 750 (850)
Q Consensus 679 ---~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~p---~~~~~ 750 (850)
++++||+|++..+++|++ ++..++++++++|||||++++........ . ..+...+. ++ ....+
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSG-W------DKLWKKYGSRFPQDDLCQYI 199 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSH-H------HHHHHHHGGGSCCCTTCCCC
T ss_pred cccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCcc-H------HHHHHHHHHhccCCCcccCC
Confidence 357899999999999995 58999999999999999999986543211 0 01111111 11 22457
Q ss_pred CHHHHHHHHhcCCceEEEEe
Q 038410 751 SLNRITSAMTSSSRLCVEHL 770 (850)
Q Consensus 751 ~~~~~~~~~~~~~gf~v~~~ 770 (850)
+..++.+.+.+ +||+++..
T Consensus 200 ~~~~~~~~l~~-aGf~~~~~ 218 (292)
T 2aot_A 200 TSDDLTQMLDN-LGLKYECY 218 (292)
T ss_dssp CHHHHHHHHHH-HTCCEEEE
T ss_pred CHHHHHHHHHH-CCCceEEE
Confidence 78888887776 79988764
No 122
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.63 E-value=1.9e-15 Score=159.70 Aligned_cols=159 Identities=13% Similarity=0.056 Sum_probs=111.2
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-----CEEEEEccc------CCC---CC
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQD-----HIRLYLCDY------RQM---PE 679 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~-----~v~~~~~D~------~~~---~~ 679 (850)
+++.+|||||||+|..+..+++..+.+|+|||+|++|++.|++++...+... ++++.+.|+ .++ .+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3578999999999987766666546899999999999999999988766421 267888887 322 14
Q ss_pred CCCccEEEEecchhhh-ChhhHHHHHHHHHhccccCeEEEEEEecCCCCcC--C-----CCcC---cccc----------
Q 038410 680 VKKYDTIISCEMIENV-GHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCY--D-----GHRL---SPGF---------- 738 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~--~-----~~~~---~~~~---------- 738 (850)
+++||+|+|..+++|+ ..++...++++++++|||||++++.++....... . .... ...|
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 5799999999999875 3345689999999999999999998775221000 0 0000 0001
Q ss_pred ccccccCCC-------CCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 739 ITEYVFPGG-------CLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 739 ~~~~i~p~~-------~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
+..|. |.+ ++.+..++.+.+.+ +||+++....+.
T Consensus 207 ~~~~~-~~~~~~~~~e~~v~~~el~~l~~~-~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 207 IVVYN-PSTMSTPMTEYIIKKNDIVRVFNE-YGFVLVDNVDFA 247 (302)
T ss_dssp EEEBC-TTTBSSCEEEECCCHHHHHHHHHH-TTEEEEEEEEHH
T ss_pred cceee-ccccCCCceeeeeEHHHHHHHHHH-CCCEEEEecChH
Confidence 11122 322 25567888777665 799999997654
No 123
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.62 E-value=4.9e-15 Score=146.63 Aligned_cols=135 Identities=19% Similarity=0.262 Sum_probs=112.6
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCcc
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYD 684 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD 684 (850)
.+++.+ ++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.++++.. +++++++|+.+++ ++++||
T Consensus 38 ~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~D 109 (195)
T 3cgg_A 38 RLIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDFD 109 (195)
T ss_dssp HHHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCEE
T ss_pred HHHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCcee
Confidence 344444 578899999999999999999998 8999999999999999998752 6899999999877 568999
Q ss_pred EEEEe-cchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCC
Q 038410 685 TIISC-EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSS 763 (850)
Q Consensus 685 ~v~s~-~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 763 (850)
+|++. .+++|++.++...+++++.++|||||++++...... ..+..++.+.+.+ +
T Consensus 110 ~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~l~~-~ 165 (195)
T 3cgg_A 110 LIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEVAER-V 165 (195)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHHHHH-H
T ss_pred EEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHHHHH-c
Confidence 99999 789999877889999999999999999999654321 1356777777775 6
Q ss_pred ceEEEEeee
Q 038410 764 RLCVEHLEN 772 (850)
Q Consensus 764 gf~v~~~~~ 772 (850)
||++.....
T Consensus 166 Gf~~~~~~~ 174 (195)
T 3cgg_A 166 GLELENAFE 174 (195)
T ss_dssp TEEEEEEES
T ss_pred CCEEeeeec
Confidence 999987754
No 124
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=5e-15 Score=153.31 Aligned_cols=120 Identities=22% Similarity=0.388 Sum_probs=104.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
...++.++..+..+++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...++ +++++++|+.+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC
Confidence 455667777777778899999999999999999997 89999999999999999999988776 799999999998755
Q ss_pred CCccEEEEe-cchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISC-EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~-~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++. ..++|++.++...+++++.++|||||.+++....
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 789999987 4567777677899999999999999999986543
No 125
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.62 E-value=3.1e-15 Score=158.67 Aligned_cols=118 Identities=19% Similarity=0.287 Sum_probs=100.4
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCEEEEEcccCCCC---
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQ---DHIRLYLCDYRQMP--- 678 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~---~~v~~~~~D~~~~~--- 678 (850)
+.+.+.+...++.+|||||||+|.++..+++. +++|+|+|+|+++++.|++++...+.. .++.+..+|+.+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 45555555568899999999999999999998 889999999999999999987554332 36889999988765
Q ss_pred -CCCCccEEEEe-cchhhhCh-----hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 679 -EVKKYDTIISC-EMIENVGH-----EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 679 -~~~~fD~v~s~-~~~~~~~~-----~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++++||+|++. .+++|+++ +.+..++++++++|||||++++....
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 56899999999 89999976 56899999999999999999997654
No 126
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.62 E-value=2.7e-15 Score=165.54 Aligned_cols=205 Identities=10% Similarity=0.035 Sum_probs=113.5
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHH--HHhhcCCCChHHHHhhcCcc
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDA--LRILGNQATFDETRILGAFR 289 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~--~~ll~~~~~~~~~~~l~~i~ 289 (850)
..++.+|.+.+++.|++|+++++|++|+.+++++.|++.+| ++.||+||+|++++.. ...+.. ..++
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~----------~~~~ 222 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGV----------RPLG 222 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTC----------CCCC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCC----------CCCc
Confidence 57899999999999999999999999999988899999888 6999999999998753 222221 0122
Q ss_pred eeecEE-EEecCC--CCCCCCCCCce---eeeecccCCCceEEEEecccc-CCCCCC-----CCceEEec--CCCCCCcc
Q 038410 290 YVYRDV-FLHRDK--NFMPQNPAAWS---AWNFVGSTNGKICLTYCLNVL-QNIGET-----SMPFLATL--NPDRTPQN 355 (850)
Q Consensus 290 ~~~~~v-~l~~d~--~~~p~~~~~~~---s~~~~~~~~~~~~~~~~~~~l-~~l~~~-----~~~~~~~l--~~~~~~~~ 355 (850)
..+.+. ++..+. ...+.....+. ...|.....+...+....... ...... ...++..+ .+......
T Consensus 223 ~~p~rg~~~~~~~~~~~~~~~~p~~~~~~~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (381)
T 3nyc_A 223 LQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATTLTIRR 302 (381)
T ss_dssp CEEEEEEEEEECCCTTCCCTTCCEEEETTSSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHHHBSCCCCC
T ss_pred eeeeEEEEEEECCCcCCCcCccceEEeCCCCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHhcCCCcccc
Confidence 222221 122221 11111000000 001111111333332111100 000000 00001000 01111223
Q ss_pred ceeeEEeccCCCChHHHHHHHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhcccccccc-----CCCCCcchh
Q 038410 356 TLLKWSTGHSVPSVAASKASLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKSCAIL-----GNPKQMVPS 430 (850)
Q Consensus 356 ~~~~w~~~~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~~~~~-----~~p~~~~~~ 430 (850)
+...|...+|. +.+..+.+......+|+|++.++.|+|+ ..|...|+.+|+.|+|++.+.. .+..++.|.
T Consensus 303 ~~~~w~G~r~~----t~D~~p~ig~~~~~~~l~~a~G~~g~G~-~~ap~~g~~la~~i~g~~~~~~~~~~~~d~~~~~~~ 377 (381)
T 3nyc_A 303 PEHTWAGLRSF----VADGDLVAGYAANAEGFFWVAAQGGYGI-QTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPR 377 (381)
T ss_dssp CSEEEEEEEEE----CTTSCCEEEECTTSTTEEEEECCTTCTT-TTHHHHHHHHHHHHTTCCCCHHHHTTTCCHHHHCGG
T ss_pred eeeeeEEcccc----CCCCCceecCCCCCCCeEEEEcCCChhH-hhCHHHHHHHHHHHhCCCCCcccccccCcccccCcc
Confidence 55677766663 1222333444445689999999999999 6999999999999998873321 345555555
Q ss_pred hh
Q 038410 431 LM 432 (850)
Q Consensus 431 ~~ 432 (850)
++
T Consensus 378 Rf 379 (381)
T 3nyc_A 378 RL 379 (381)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 127
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.62 E-value=2.3e-15 Score=146.79 Aligned_cols=116 Identities=18% Similarity=0.168 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MP 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~ 678 (850)
......+++.+.++++.+|||||||+|.++..+++. ++++|+|+|+|+++++.|+++++..++++++ ++++|..+ ++
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~ 89 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD 89 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh
Confidence 344467788888999999999999999999999998 5789999999999999999999999988789 88888754 33
Q ss_pred -CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 679 -EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 679 -~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
..++||+|++..+++| ..+++++.++|||||++++..+.
T Consensus 90 ~~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GCCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred ccCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 2278999999999887 47899999999999999987654
No 128
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=7.3e-15 Score=146.70 Aligned_cols=115 Identities=15% Similarity=0.209 Sum_probs=101.0
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
....+++.+.++++.+|||||||+|.++..+++. +.++|+|+|+|+++++.|+++++..++ ++++++++|+.+.. ..
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTS
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcC
Confidence 3457788889999999999999999999999998 458999999999999999999999888 58999999986654 44
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++...++ ++..+++++.++|||||++++....
T Consensus 107 ~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 7899999998776 3689999999999999999996543
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.61 E-value=3.2e-15 Score=150.06 Aligned_cols=112 Identities=19% Similarity=0.151 Sum_probs=100.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
.....+++.+.++++.+|||||||+|.++..+++. +.+|+++|+|+++++.|+++++..+++ +++++++|..+.. ..
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccC
Confidence 44567888889999999999999999999999998 899999999999999999999998887 7999999998865 55
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++..+++|+++ ++.++|||||++++....
T Consensus 142 ~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 78999999999999964 488999999999996654
No 130
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.60 E-value=7.7e-15 Score=149.60 Aligned_cols=111 Identities=22% Similarity=0.254 Sum_probs=93.0
Q ss_pred HHcCCCCCCeEEEEccC-ccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCCccE
Q 038410 609 EKARVNKGLDVLEIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKKYDT 685 (850)
Q Consensus 609 ~~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~fD~ 685 (850)
-...++++.+||||||| +|.++..+++..+.+|+|+|+|+++++.|+++++..++ +++++++|+..+. ++++||+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeE
Confidence 33446789999999999 99999999987678999999999999999999999888 8999999976543 4589999
Q ss_pred EEEecchhhhCh-----------------hhHHHHHHHHHhccccCeEEEEEE
Q 038410 686 IISCEMIENVGH-----------------EYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 686 v~s~~~~~~~~~-----------------~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|+++..+.+.++ +.+..+++++.++|||||++++..
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 999977765433 224789999999999999999854
No 131
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=8e-16 Score=157.12 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=89.1
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCCCccEEEE-
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVKKYDTIIS- 688 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~~fD~v~s- 688 (850)
..+|.+|||||||+|..+.++++..+.+|+|||+|+++++.|+++.+..+. +++++.+|+.++. ++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEe
Confidence 468899999999999999999987567999999999999999999887665 7899999987653 5688999974
Q ss_pred ----ecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 689 ----CEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 689 ----~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
...++|+ .++..++++++|+|||||++++.
T Consensus 136 ~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccchhhh--cchhhhhhhhhheeCCCCEEEEE
Confidence 4556666 56899999999999999999873
No 132
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.60 E-value=1.4e-15 Score=143.88 Aligned_cols=104 Identities=12% Similarity=0.183 Sum_probs=90.1
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecch
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMI 692 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~ 692 (850)
.+.++|||||||||.++..++.. ++++|+++|+|+.|++.+++++...|+.+++++ +|..+..+.++||+|++..++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 56789999999999999999887 789999999999999999999999999776777 666544466899999999999
Q ss_pred hhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 693 ENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 693 ~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
||+ ++.+..+.++.+.|||||.++--.
T Consensus 126 HlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred Hhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 999 446677779999999999887643
No 133
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=160.48 Aligned_cols=153 Identities=18% Similarity=0.314 Sum_probs=108.9
Q ss_pred CCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCC-----------------------------
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQ----------------------------- 664 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~----------------------------- 664 (850)
++.+|||||||+|.++..++++ ++++|+|||+|+.+++.|+++++..+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6889999999999999999998 5789999999999999999987655422
Q ss_pred ----------------------------CCEEEEEcccCCCC------CCCCccEEEEecchhhh----ChhhHHHHHHH
Q 038410 665 ----------------------------DHIRLYLCDYRQMP------EVKKYDTIISCEMIENV----GHEYIEEFFGC 706 (850)
Q Consensus 665 ----------------------------~~v~~~~~D~~~~~------~~~~fD~v~s~~~~~~~----~~~~~~~~~~~ 706 (850)
++|+|+++|+.+.. ..++||+|++..+++|+ +++.+..+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 68999999987654 46899999999999998 56678999999
Q ss_pred HHhccccCeEEEEEEecCCCCcCCCCcCcc-ccccccccCCCCCCCHHHHHHHHhc-CCceEEEEeee
Q 038410 707 CESLLAEHGLLLLQFSSVPDQCYDGHRLSP-GFITEYVFPGGCLPSLNRITSAMTS-SSRLCVEHLEN 772 (850)
Q Consensus 707 ~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~p~~~~~~~~~~~~~~~~-~~gf~v~~~~~ 772 (850)
++++|||||++++...... .+....... .....|- .....+.++.+.+.+ .+||..+++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~--~y~~~~~~~~~~~~~~~---~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWS--SYGKRKTLTETIYKNYY---RIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHH--HHHTTTTSCHHHHHHHH---HCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCch--hhhhhhcccHHHHhhhh---cEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 9999999999999643211 111111111 1111110 011235677666664 37998766544
No 134
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.59 E-value=1.3e-14 Score=143.34 Aligned_cols=118 Identities=23% Similarity=0.423 Sum_probs=104.4
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CEEEEEcccCCCCCCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQD-HIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~-~v~~~~~D~~~~~~~~~ 682 (850)
.+.+++.+..+++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...++++ +++++++|+.+..++++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRK 119 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSC
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCC
Confidence 357788888889999999999999999999998 8999999999999999999999888864 49999999987655678
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
||+|++..+++|. .+....+++++.++|||||.+++....
T Consensus 120 ~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 120 YNKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ceEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 9999999888762 356789999999999999999997765
No 135
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.59 E-value=4.1e-15 Score=158.16 Aligned_cols=125 Identities=16% Similarity=0.201 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHH-------HHcCC-CCCEEEE
Q 038410 600 QMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKV-------KEAGL-QDHIRLY 670 (850)
Q Consensus 600 q~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~-------~~~gl-~~~v~~~ 670 (850)
....+..+++.+.++++++|||||||+|.+++.+|...++ +|+|||+|+++++.|++++ +..|+ .++|+|+
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 3566788999999999999999999999999999987666 5999999999999998754 44566 3689999
Q ss_pred EcccCCCC-CC--CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCC
Q 038410 671 LCDYRQMP-EV--KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQ 727 (850)
Q Consensus 671 ~~D~~~~~-~~--~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~ 727 (850)
++|+.+++ .+ ..||+|+++..+ +. .+....+++++++|||||++++.+...+..
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~-F~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFA-FG--PEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTT-CC--HHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred ECcccCCccccccCCccEEEEcccc-cC--chHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 99999887 22 479999998765 33 457888999999999999999987766553
No 136
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=1.2e-14 Score=143.15 Aligned_cols=109 Identities=12% Similarity=0.152 Sum_probs=95.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCCCccEEEEec
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVKKYDTIISCE 690 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~~fD~v~s~~ 690 (850)
.++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++..++ ++++++++|+.++. ++++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 57889999999999999988887455899999999999999999999998 58999999988764 358999999998
Q ss_pred chhhhChhhHHHHHHHHHh--ccccCeEEEEEEecC
Q 038410 691 MIENVGHEYIEEFFGCCES--LLAEHGLLLLQFSSV 724 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r--~LkpgG~~~~~~~~~ 724 (850)
.+++. .+++..+++++.+ +|||||+++++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87764 2468899999999 999999999977654
No 137
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.59 E-value=5.9e-15 Score=148.26 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=106.5
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKK 682 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~ 682 (850)
..+++.+.. ++.+|||||||+|.++..+ +. +|+|+|+|+++++.++++. .+++++++|+.+++ ++++
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~ 95 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGES 95 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSC
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCc
Confidence 345555443 7889999999999999887 56 9999999999999999885 37899999999988 6689
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHh
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMT 760 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~ 760 (850)
||+|++..+++|++ ++..+++++.++|||||++++.++.........+.. ........+....+.+..++.+.+.
T Consensus 96 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 96 FDVVLLFTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRR-LGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEEEEESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHH-HHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred EEEEEEcChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHH-HhhccCccccccccCCHHHHHHHhc
Confidence 99999999999995 579999999999999999999887543211000000 0000001122345678999977765
No 138
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.59 E-value=1e-14 Score=151.67 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=109.7
Q ss_pred ccCchHHHHHhhhhccCCChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHH
Q 038410 552 RKNTLAQARRNISHHYDVSNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAI 631 (850)
Q Consensus 552 ~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~ 631 (850)
..+++....+.++.+||..++.. . + ....+.+..++..+. +++.+|||||||+|.++.
T Consensus 13 ~~~~~~~~~~~~a~~Yd~~~~~~-------------~-------~-~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~ 70 (260)
T 2avn_A 13 MKLRSWEFYDRIARAYDSMYETP-------------K-------W-KLYHRLIGSFLEEYL-KNPCRVLDLGGGTGKWSL 70 (260)
T ss_dssp EECCHHHHHHHHHHHHGGGGCSH-------------H-------H-HHHHHHHHHHHHHHC-CSCCEEEEETCTTCHHHH
T ss_pred hhhhhcchhhHHHHHHHHhcccc-------------c-------h-hHHHHHHHHHHHHhc-CCCCeEEEeCCCcCHHHH
Confidence 35677888888999998432100 0 0 112233344444432 378899999999999999
Q ss_pred HHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhc
Q 038410 632 EIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESL 710 (850)
Q Consensus 632 ~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~ 710 (850)
.+++. +++|+|+|+|+++++.|+++.. .+ ++++|+.+++ ++++||+|++..+++|+..+ +..+++++.++
T Consensus 71 ~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~ 141 (260)
T 2avn_A 71 FLQER-GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRV 141 (260)
T ss_dssp HHHTT-TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHH
T ss_pred HHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcchhhhcccc-HHHHHHHHHHH
Confidence 99997 8899999999999999998753 12 8899999888 67899999999988887543 89999999999
Q ss_pred cccCeEEEEEEec
Q 038410 711 LAEHGLLLLQFSS 723 (850)
Q Consensus 711 LkpgG~~~~~~~~ 723 (850)
|||||++++...+
T Consensus 142 LkpgG~l~~~~~~ 154 (260)
T 2avn_A 142 LVPDGLLIATVDN 154 (260)
T ss_dssp EEEEEEEEEEEEB
T ss_pred cCCCeEEEEEeCC
Confidence 9999999998765
No 139
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=6.5e-15 Score=146.20 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=98.0
Q ss_pred HHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCC
Q 038410 607 LIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKK 682 (850)
Q Consensus 607 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~ 682 (850)
.+....++++++|||+|||+|.++..+++. +.++|+|+|+|+++++.|+++++..++.++++++++|+.+++ .+++
T Consensus 14 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 14 DYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred HHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence 334446788999999999999999999998 457999999999999999999999998779999999988875 4578
Q ss_pred ccEEEEecchhh-------hChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 683 YDTIISCEMIEN-------VGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 683 fD~v~s~~~~~~-------~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
||+|++...+.. ...++...+++++.++|||||++++..+.
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999999875511 11234567999999999999999997654
No 140
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=3.8e-15 Score=153.49 Aligned_cols=151 Identities=15% Similarity=0.069 Sum_probs=113.6
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC------CCCccEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE------VKKYDTI 686 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~------~~~fD~v 686 (850)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..+++++++|+.+++. ...||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 578899999999999999999998 6699999999999999998862 2389999999998651 1349999
Q ss_pred EEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC-----cCc----cccccccccCCCCCCCHHHHHH
Q 038410 687 ISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH-----RLS----PGFITEYVFPGGCLPSLNRITS 757 (850)
Q Consensus 687 ~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~i~p~~~~~~~~~~~~ 757 (850)
++..+++|+++++...+++++.++|||||++++.++..++..+... ... ...+.....|+ ..+.+++.+
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 206 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPG--IFTAEDIEL 206 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCC--CCCHHHHHH
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCC--ccCHHHHHH
Confidence 9999999998778999999999999999999998876543211000 000 00111111121 246778876
Q ss_pred HHhcCCceEEEEeeec
Q 038410 758 AMTSSSRLCVEHLENI 773 (850)
Q Consensus 758 ~~~~~~gf~v~~~~~~ 773 (850)
.+ +||+++.....
T Consensus 207 ~~---aGf~~~~~~~~ 219 (245)
T 3ggd_A 207 YF---PDFEILSQGEG 219 (245)
T ss_dssp HC---TTEEEEEEECC
T ss_pred Hh---CCCEEEecccc
Confidence 65 69999876554
No 141
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.58 E-value=4.4e-15 Score=148.41 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=105.7
Q ss_pred HHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC----CCCC
Q 038410 609 EKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP----EVKK 682 (850)
Q Consensus 609 ~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~----~~~~ 682 (850)
+.++++||++|||+|||+|.++.++|+. +..+|+|+|+|++|++.+++++++.+ ++..+..|..+.. ..++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCccccccccce
Confidence 4577999999999999999999999998 56799999999999999999876543 8999999987643 4578
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcC
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSS 762 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 762 (850)
+|+|++. +.|. .+...+++++++.|||||++++..-........ |.. ....+..+.+.+
T Consensus 148 vDvVf~d--~~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~--------------p~~--~~~~~ev~~L~~- 206 (233)
T 4df3_A 148 VDGLYAD--VAQP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTT--------------EPS--EVYKREIKTLMD- 206 (233)
T ss_dssp EEEEEEC--CCCT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT--------------CCC--HHHHHHHHHHHH-
T ss_pred EEEEEEe--ccCC--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCC--------------ChH--HHHHHHHHHHHH-
Confidence 9999864 3343 346889999999999999999854221110000 000 012334455664
Q ss_pred CceEEEEeeecCC
Q 038410 763 SRLCVEHLENIGI 775 (850)
Q Consensus 763 ~gf~v~~~~~~~~ 775 (850)
+||++.+..++.+
T Consensus 207 ~GF~l~e~i~L~p 219 (233)
T 4df3_A 207 GGLEIKDVVHLDP 219 (233)
T ss_dssp TTCCEEEEEECTT
T ss_pred CCCEEEEEEccCC
Confidence 6999988877654
No 142
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.58 E-value=2.4e-17 Score=169.56 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=131.0
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C-C
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E-V 680 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~-~ 680 (850)
.++.+++.++++++++|||||||+|.++..++++ +++|+|+|+|+++++.|++++. ..++++++++|+.+++ + +
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccC
Confidence 4568899999999999999999999999999998 7999999999999999988765 2358999999999987 3 3
Q ss_pred CCccEEEEecch-----------hhhChhhHHHHH----HHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccC
Q 038410 681 KKYDTIISCEMI-----------ENVGHEYIEEFF----GCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFP 745 (850)
Q Consensus 681 ~~fD~v~s~~~~-----------~~~~~~~~~~~~----~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p 745 (850)
++| .|+++..+ +|. .....++ +.+.|+|||||++.+..... ....+..+++|
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~--~~~~~~lm~q~e~a~rll~~~G~l~v~~~~~----------~~~~~~~~v~~ 159 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFES--RASDIYLIVEEGFYKRTLDIHRTLGLLLHTQ----------VSIQQLLKLPA 159 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHC--CCEEEEEEEESSHHHHHHCGGGSHHHHTTTT----------BCCCEEEEECC
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCC--CCCeEEEEeeHHHHHHHhCCCCchhhhheeh----------eeEEEEEEECc
Confidence 689 77776322 221 1123445 77999999999987733211 12234456777
Q ss_pred CCCCCCHHHHHHHHhcCCceEEEEeee--------cCCcHHHHHHHHH--------------HHHH-hcHHHHHhccCCH
Q 038410 746 GGCLPSLNRITSAMTSSSRLCVEHLEN--------IGIHFYQTLRCWR--------------TNLM-EKQSEILALGFNE 802 (850)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~gf~v~~~~~--------~~~~y~~tl~~w~--------------~~~~-~~~~~~~~~~~~~ 802 (850)
++..|.+.. .-.++.... -..+|..+++.|. +++. ..+.....+. .+
T Consensus 160 ~~f~P~p~v---------~s~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~~~~~~~~~~~r~~~l~-~~ 229 (245)
T 1yub_A 160 ECFHPKPKV---------NSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTIT-YE 229 (245)
T ss_dssp TTSBSSCCS---------CEEEEEECBCSCSSCHHHHHHHHHHHHHHHHTCHHHHCSSSHHHHHHHHTTCSCTTSCC-SH
T ss_pred hhccCCCCc---------eEEEEEEEECCCCCCcccHHHHHHHHHHHHhhcchhhhchHHHHHHcCCCCCCChhhCC-HH
Confidence 777776311 112222111 1135889999996 3332 1222333454 49
Q ss_pred HHHHHHHHHHHHHHH
Q 038410 803 KFIRTWEYYFDYCAA 817 (850)
Q Consensus 803 ~~~r~w~~yl~~~~~ 817 (850)
.|.|+|++|+++|++
T Consensus 230 ~f~~l~~~~~~~~~~ 244 (245)
T 1yub_A 230 QVLSIFNSYLLFNGR 244 (245)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999974
No 143
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=6.1e-15 Score=149.07 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=107.7
Q ss_pred CCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhh
Q 038410 616 GLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIEN 694 (850)
Q Consensus 616 ~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~ 694 (850)
+.+|||||||+|.++..+++. +|+|+|+++++.++++ +++++++|+.+++ ++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999988764 9999999999999876 5789999999887 5679999999999999
Q ss_pred hChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeec
Q 038410 695 VGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 695 ~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~ 773 (850)
++ ++..+++++.++|||||.+++.++.........+... ......+......+..++.+.+.+ +||+++.+...
T Consensus 115 ~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-~Gf~~~~~~~~ 188 (219)
T 1vlm_A 115 VD--DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN--KEKSVFYKNARFFSTEELMDLMRK-AGFEEFKVVQT 188 (219)
T ss_dssp SS--CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT--TTC-CCSTTCCCCCHHHHHHHHHH-TTCEEEEEEEE
T ss_pred cc--CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH--hcCcchhcccccCCHHHHHHHHHH-CCCeEEEEecc
Confidence 95 4789999999999999999998765432100000000 000111123456789999888876 79999887664
No 144
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.57 E-value=1.8e-14 Score=156.34 Aligned_cols=167 Identities=14% Similarity=0.096 Sum_probs=131.9
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
...+++..++.+..+|||||||.|.++..++++ |+.+++..|+ +++++.|++++...+ .++|+++.+|+.+.+. ..
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~ 244 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PE 244 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CC
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CC
Confidence 356777778888899999999999999999999 8899999998 889999998876544 6799999999876553 45
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC-ccccccccccCCCCCCCHHHHHHHHhc
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL-SPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+|+|++..++++.++++...+++++++.|||||+++|.+...++........ ..+ +.-....+|.-.+..++.+.+++
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~d-l~ml~~~~g~ert~~e~~~ll~~ 323 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYS-LNMLVQTEGQERTPTHYHMLLSS 323 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHH-HHHHHSSSCCCCCHHHHHHHHHH
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHH-HHHHHhCCCcCCCHHHHHHHHHH
Confidence 8999999999999998888999999999999999999988776543221111 011 11123356777899999887776
Q ss_pred CCceEEEEeeecCC
Q 038410 762 SSRLCVEHLENIGI 775 (850)
Q Consensus 762 ~~gf~v~~~~~~~~ 775 (850)
+||+++.+...+.
T Consensus 324 -AGf~~v~v~~~~~ 336 (353)
T 4a6d_A 324 -AGFRDFQFKKTGA 336 (353)
T ss_dssp -HTCEEEEEECCSS
T ss_pred -CCCceEEEEEcCC
Confidence 7999988876653
No 145
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.57 E-value=1.5e-14 Score=164.75 Aligned_cols=120 Identities=18% Similarity=0.285 Sum_probs=102.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHc------CCCCCEEEEEcc
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG--CKYTGITLSEEQLKYTETKVKEA------GLQDHIRLYLCD 673 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~------gl~~~v~~~~~D 673 (850)
..++.+++.+...++.+|||||||+|.++..+++..+ .+|+|||+|++|++.|++++... ++. +++++++|
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESC
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECc
Confidence 3445666666666889999999999999999999832 79999999999999999977643 443 79999999
Q ss_pred cCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 674 YRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 674 ~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+.+++ .+++||+|++..+++|+++.....+++++.++|||| .+++.++.
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99998 668999999999999998877778999999999999 77776654
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.57 E-value=1.2e-14 Score=150.19 Aligned_cols=157 Identities=18% Similarity=0.186 Sum_probs=115.5
Q ss_pred HHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHH
Q 038410 575 SLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYT 654 (850)
Q Consensus 575 ~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a 654 (850)
...+++.|.|..+... ..... ...+++. ++++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|
T Consensus 90 ~~~l~p~~~fgtg~~~--------tt~~~-~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a 158 (254)
T 2nxc_A 90 PLVIEPGMAFGTGHHE--------TTRLA-LKALARH-LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQA 158 (254)
T ss_dssp EEECCCC-----CCSH--------HHHHH-HHHHHHH-CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHH
T ss_pred EEEECCCccccCCCCH--------HHHHH-HHHHHHh-cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHH
Confidence 4567777776555321 11122 2333333 578899999999999999999987 77999999999999999
Q ss_pred HHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC
Q 038410 655 ETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL 734 (850)
Q Consensus 655 ~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~ 734 (850)
+++++.+++. +++.++|+.+..++++||+|+++...++ +..+++++.++|||||++++..+...
T Consensus 159 ~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~~~-----~~~~l~~~~~~LkpgG~lils~~~~~--------- 222 (254)
T 2nxc_A 159 EANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANLYAEL-----HAALAPRYREALVPGGRALLTGILKD--------- 222 (254)
T ss_dssp HHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEECCHHH-----HHHHHHHHHHHEEEEEEEEEEEEEGG---------
T ss_pred HHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECCcHHH-----HHHHHHHHHHHcCCCCEEEEEeeccC---------
Confidence 9999988875 8999999776323468999999876654 47899999999999999999765421
Q ss_pred ccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeecCC
Q 038410 735 SPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGI 775 (850)
Q Consensus 735 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 775 (850)
...++.+.+.+ +||++......+.
T Consensus 223 ----------------~~~~v~~~l~~-~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 223 ----------------RAPLVREAMAG-AGFRPLEEAAEGE 246 (254)
T ss_dssp ----------------GHHHHHHHHHH-TTCEEEEEEEETT
T ss_pred ----------------CHHHHHHHHHH-CCCEEEEEeccCC
Confidence 24566666665 6999988766543
No 147
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.56 E-value=1.9e-14 Score=157.11 Aligned_cols=160 Identities=13% Similarity=0.125 Sum_probs=124.2
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
....+++.+. +.++.+|||||||+|.++..++++ ++.+++++|+ +++++.|+++ ++++++.+|+.+ + +
T Consensus 190 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p 260 (368)
T 3reo_A 190 TMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVP 260 (368)
T ss_dssp HHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCC
Confidence 3456677665 778899999999999999999998 7889999999 8888877642 389999999887 4 4
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCc----CccccccccccCCCCCCCHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHR----LSPGFITEYVFPGGCLPSLNRI 755 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~p~~~~~~~~~~ 755 (850)
.+ |+|++..++||+++++...++++++++|||||++++.++..++....... ...++......+++...+..++
T Consensus 261 ~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~ 338 (368)
T 3reo_A 261 KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEF 338 (368)
T ss_dssp CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHH
T ss_pred CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHH
Confidence 33 99999999999998888899999999999999999999877654321110 0011111112357788899999
Q ss_pred HHHHhcCCceEEEEeeecC
Q 038410 756 TSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~~ 774 (850)
.+.+.+ +||+++.+....
T Consensus 339 ~~ll~~-AGF~~v~~~~~~ 356 (368)
T 3reo_A 339 QALAMA-SGFRGFKVASCA 356 (368)
T ss_dssp HHHHHH-TTCCEEEEEEEE
T ss_pred HHHHHH-CCCeeeEEEEeC
Confidence 888776 799998877653
No 148
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.56 E-value=3.8e-15 Score=176.54 Aligned_cols=57 Identities=16% Similarity=0.063 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..++.+|.+.+++.|++|+++++|++|..++++|.|++.+|.++.||+||+|++.+.
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 578999999999999999999999999999999999998888899999999999874
No 149
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.56 E-value=1.8e-14 Score=147.73 Aligned_cols=102 Identities=14% Similarity=0.207 Sum_probs=89.9
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C---CCCccEE
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E---VKKYDTI 686 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~---~~~fD~v 686 (850)
.++++.+|||||||+|.++..+++. ++++|+|||+|+++++.|+++++..+++ +++++++|+.+++ . +++||+|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEE
Confidence 3457889999999999999999975 6889999999999999999999999986 6999999988765 2 5789999
Q ss_pred EEecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 687 ISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 687 ~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
++..+ .++..+++++.++|||||++++.
T Consensus 146 ~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 146 TARAV------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEECC------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEecc------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 99873 34789999999999999999884
No 150
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=3.2e-14 Score=148.31 Aligned_cols=165 Identities=9% Similarity=0.101 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCeEEEEccCc---cHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEE
Q 038410 596 LDVAQMRKVSLLIEKAR-VNKGLDVLEIGCGW---GTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLY 670 (850)
Q Consensus 596 l~~aq~~~~~~~~~~l~-~~~~~~vLDiGcG~---G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~ 670 (850)
+..+++..++.+++.+. ..+..+|||||||+ |.++..+++. ++++|+++|+|+.|++.|++++.. .++++++
T Consensus 57 ~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~ 133 (274)
T 2qe6_A 57 SAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVF 133 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEE
T ss_pred HHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEE
Confidence 34556677777777765 34457999999999 9888777665 689999999999999999998843 3489999
Q ss_pred EcccCCCC------------CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCcccc
Q 038410 671 LCDYRQMP------------EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGF 738 (850)
Q Consensus 671 ~~D~~~~~------------~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~ 738 (850)
++|+.+.. +..+||+|+++.+++|++++....++++++++|||||++++.+..... ..........
T Consensus 134 ~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~~~~~~~~~~ 211 (274)
T 2qe6_A 134 TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--LPAQQKLARI 211 (274)
T ss_dssp ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--CHHHHHHHHH
T ss_pred EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--hHHHHHHHHH
Confidence 99997631 124899999999999998777899999999999999999998876532 0000000111
Q ss_pred ccccccCCCCCCCHHHHHHHHhcCCceEEEE
Q 038410 739 ITEYVFPGGCLPSLNRITSAMTSSSRLCVEH 769 (850)
Q Consensus 739 ~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 769 (850)
....-.| ....+.+++.+.+ .||++++
T Consensus 212 ~~~~~~~-~~~~s~~ei~~~l---~G~~l~~ 238 (274)
T 2qe6_A 212 TRENLGE-GWARTPEEIERQF---GDFELVE 238 (274)
T ss_dssp HHHHHSC-CCCBCHHHHHHTT---TTCEECT
T ss_pred HHhcCCC-CccCCHHHHHHHh---CCCeEcc
Confidence 1111112 3556888886655 3888765
No 151
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.56 E-value=1.9e-15 Score=179.27 Aligned_cols=57 Identities=7% Similarity=0.008 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCc-EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGS-QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~i~ad~VV~A~p~~~ 268 (850)
..++++|.+.+++.|++|+++++|++|+.++++|.|++.+|+ ++.||+||+|++.+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 578999999999999999999999999999999999998886 799999999999873
No 152
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=1.1e-14 Score=141.96 Aligned_cols=119 Identities=14% Similarity=0.133 Sum_probs=98.9
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C-C
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P-E 679 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~-~ 679 (850)
..+.+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++..++.++++++++|+.+. + .
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 3456666665 67889999999999999999998844699999999999999999999998877899999998773 3 3
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHH--hccccCeEEEEEEecC
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCE--SLLAEHGLLLLQFSSV 724 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~--r~LkpgG~~~~~~~~~ 724 (850)
+++||+|++...++. ......++.+. ++|||||.+++.....
T Consensus 98 ~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 98 TGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred cCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 467999999877643 23567777777 9999999999977654
No 153
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.55 E-value=2.7e-14 Score=155.61 Aligned_cols=160 Identities=14% Similarity=0.090 Sum_probs=125.5
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
....+++.+. +.++.+|||||||+|.++..++++ ++.+++++|+ +++++.|+++ ++++++.+|+.+ + +
T Consensus 188 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 188 ITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCC
Confidence 3456777776 778899999999999999999998 7889999999 8888877642 489999999987 5 4
Q ss_pred CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC----ccccccccccCCCCCCCHHHH
Q 038410 680 VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL----SPGFITEYVFPGGCLPSLNRI 755 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~p~~~~~~~~~~ 755 (850)
.+ |+|++..+++|+++++...++++++++|||||++++.++..++........ ..++...-..+++...+..++
T Consensus 259 ~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~ 336 (364)
T 3p9c_A 259 SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREF 336 (364)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHH
T ss_pred CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHH
Confidence 33 999999999999988889999999999999999999998876543221100 011111112467788899999
Q ss_pred HHHHhcCCceEEEEeeecC
Q 038410 756 TSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~~ 774 (850)
.+.+.+ +||+++++....
T Consensus 337 ~~ll~~-AGF~~v~~~~~~ 354 (364)
T 3p9c_A 337 QALARG-AGFTGVKSTYIY 354 (364)
T ss_dssp HHHHHH-TTCCEEEEEEEE
T ss_pred HHHHHH-CCCceEEEEEcC
Confidence 887775 799998887654
No 154
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.55 E-value=4.4e-14 Score=153.63 Aligned_cols=133 Identities=12% Similarity=0.205 Sum_probs=107.4
Q ss_pred ceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc
Q 038410 583 MYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA 661 (850)
Q Consensus 583 ~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~ 661 (850)
....+.|.....+... +.+++.+...++.+|||+|||+|.++..+++. ++++|+|+|+|+.+++.|+++++.+
T Consensus 196 ~~~pg~Fs~~~~d~~~------~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n 269 (375)
T 4dcm_A 196 HNHANVFSRTGLDIGA------RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 269 (375)
T ss_dssp EECTTCTTCSSCCHHH------HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred EeCCCcccCCcccHHH------HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc
Confidence 3356677655444433 46678888788899999999999999999998 5899999999999999999999998
Q ss_pred CCCC--CEEEEEcccCCCCCCCCccEEEEecchhh---hChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 662 GLQD--HIRLYLCDYRQMPEVKKYDTIISCEMIEN---VGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 662 gl~~--~v~~~~~D~~~~~~~~~fD~v~s~~~~~~---~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
++.+ +++++..|+.+..++++||+|+++..+++ ++......+++++.++|||||++++..
T Consensus 270 gl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 270 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCceEEEEechhhccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 8764 58889999887546679999999998875 334445678999999999999999954
No 155
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.54 E-value=1.3e-14 Score=163.37 Aligned_cols=57 Identities=9% Similarity=0.135 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhhccCceEeeCC---ceEEEEecCCceE-EEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSC---EVYSVFPADEGCS-IVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~---~V~~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..++.+|.+.+++.|++|++++ +|++|..++++|. |++.+|+++.||+||+|++++.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 5789999999999999999999 9999999888887 9999997899999999999985
No 156
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=2.2e-14 Score=144.42 Aligned_cols=121 Identities=16% Similarity=0.176 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEEcccC
Q 038410 599 AQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQ-DHIRLYLCDYR 675 (850)
Q Consensus 599 aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~-~~v~~~~~D~~ 675 (850)
.+.+.+..++...+.+++.+|||||||+|..+..+++. ++++|++||+|+++++.|++++++.|+. ++++++++|+.
T Consensus 40 ~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~ 119 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH
T ss_pred HHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH
Confidence 34556667777766666779999999999999999996 3789999999999999999999999998 89999999987
Q ss_pred CCC---CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 676 QMP---EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 676 ~~~---~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+.. ++++||+|++.... .++..+++++.++|||||.+++.++..
T Consensus 120 ~~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 120 DVMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp HHGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 653 25899999987543 346789999999999999999965543
No 157
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=6.4e-14 Score=145.39 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=97.0
Q ss_pred HHHHHcCCC-CCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCC
Q 038410 606 LLIEKARVN-KGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVK 681 (850)
Q Consensus 606 ~~~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~ 681 (850)
.+...+.++ ++.+|||||||+|.++..++++...+|+|+|+|+++++.|+++++.+++.++++++++|+.++. +++
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTT
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccC
Confidence 445556777 8999999999999999999998445999999999999999999999999989999999998875 368
Q ss_pred CccEEEEecchhhh------------------ChhhHHHHHHHHHhccccCeEEEEE
Q 038410 682 KYDTIISCEMIENV------------------GHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 682 ~fD~v~s~~~~~~~------------------~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
+||+|+++..+.+. ....+..+++.+.++|||||++++.
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 99999998665433 1134578999999999999999983
No 158
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=1.6e-14 Score=147.11 Aligned_cols=109 Identities=21% Similarity=0.297 Sum_probs=94.2
Q ss_pred cCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC---CCCccEE
Q 038410 611 ARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE---VKKYDTI 686 (850)
Q Consensus 611 l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~---~~~fD~v 686 (850)
+.+.++.+|||||||+|..+..+++. ++++|+++|+|+++++.|+++++..++.++++++++|+.+..+ +++||+|
T Consensus 67 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 67 IRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred HhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEE
Confidence 33457889999999999999999986 5889999999999999999999999998899999999987543 5799999
Q ss_pred EEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 687 ISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 687 ~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
++.... .++..+++++.++|||||++++.++..
T Consensus 147 ~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 147 FIDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp EEETTS-----SSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred EEcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 987543 346889999999999999999866543
No 159
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=1.9e-15 Score=156.55 Aligned_cols=197 Identities=13% Similarity=0.077 Sum_probs=119.6
Q ss_pred ChHHHHHhcCCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCC--CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeC
Q 038410 570 SNELFSLFLGKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARV--NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITL 646 (850)
Q Consensus 570 ~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~--~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~ 646 (850)
.+.....|.+..+..+..+|-+...+ .......+..+++.+.. .++.+|||||||+|.++..++++ ++++|+|+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~~-r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~ 97 (254)
T 2h00_A 19 TCTLLREDFGLSIDIPLERLIPTVPL-RLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEV 97 (254)
T ss_dssp HHHHHHHHHCCCCCCCTTSCCCCHHH-HHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEES
T ss_pred HHHHHHHcCCeeeecCccccCCCccc-hHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEEC
Confidence 34444455555555555544332100 11112344445544332 26789999999999999999987 6899999999
Q ss_pred CHHHHHHHHHHHHHcCCCCCEEEEEcccCCC---C-C---CCCccEEEEecchhhhCh-------------hhHHHHHHH
Q 038410 647 SEEQLKYTETKVKEAGLQDHIRLYLCDYRQM---P-E---VKKYDTIISCEMIENVGH-------------EYIEEFFGC 706 (850)
Q Consensus 647 s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~---~-~---~~~fD~v~s~~~~~~~~~-------------~~~~~~~~~ 706 (850)
|+++++.|+++++..++.++++++++|+.+. + + +++||+|+++..+.+.+. +....++.+
T Consensus 98 s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 177 (254)
T 2h00_A 98 DDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGG 177 (254)
T ss_dssp CHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------C
T ss_pred CHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhh
Confidence 9999999999999999987899999997762 2 2 258999999977665431 112356788
Q ss_pred HHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEeeec
Q 038410 707 CESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 707 ~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~ 773 (850)
++++|||||.+.+......... .......++. ...+..+...++.+.+.+ +||..+.+..+
T Consensus 178 ~~~~LkpgG~l~~~~~~~~~~~--~~l~~~g~~~---~~~~~~~~~~~~~~~l~~-~Gf~~v~~~~~ 238 (254)
T 2h00_A 178 ITEIMAEGGELEFVKRIIHDSL--QLKKRLRWYS---CMLGKKCSLAPLKEELRI-QGVPKVTYTEF 238 (254)
T ss_dssp TTTTHHHHTHHHHHHHHHHHHH--HHGGGBSCEE---EEESSTTSHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHEecCCEEEEEHHHHHHHH--hcccceEEEE---ECCCChhHHHHHHHHHHH-cCCCceEEEEE
Confidence 9999999998876432111000 0001111111 112334555777676765 79976665443
No 160
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.53 E-value=3.4e-14 Score=143.07 Aligned_cols=108 Identities=15% Similarity=0.254 Sum_probs=94.9
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEec
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCE 690 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~ 690 (850)
++++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|+++... ..+++++++|+.+++ ++++||+|++..
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 115 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKG 115 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEES
T ss_pred cCCCCeEEEECCCCcHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECc
Confidence 378899999999999999999998 54 999999999999999998753 237999999999887 668999999999
Q ss_pred chhhhC-------------hhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 691 MIENVG-------------HEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 691 ~~~~~~-------------~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+++|+. .++...+++++.++|||||++++.++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 116 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred chhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 998875 3467899999999999999999987654
No 161
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=3e-14 Score=143.58 Aligned_cols=140 Identities=20% Similarity=0.189 Sum_probs=108.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG--CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP- 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~- 678 (850)
.....+++.+.++++.+|||||||+|.++..+++..+ .+|+++|+|+++++.|++++...+++ ++++.++|..+..
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCG
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCC
Confidence 3456778888889999999999999999999999843 89999999999999999999988876 6999999986543
Q ss_pred CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcC-ccccccccccCCCCCCC
Q 038410 679 EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRL-SPGFITEYVFPGGCLPS 751 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~p~~~~~~ 751 (850)
..++||+|++..+++|++ +++.++|||||++++...... .....+.+ ...|..+++++....|.
T Consensus 143 ~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~ 207 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGRYL-QRLVLAEKRGDEIIIKDCGPVAFVPL 207 (215)
T ss_dssp GGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESSSS-EEEEEEEEETTEEEEEEEEEECCCBC
T ss_pred CCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEECCCC-cEEEEEEEeCCEEEEEEeccEEEEec
Confidence 357899999999999985 378999999999999765432 22111211 23455566665545444
No 162
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.53 E-value=2.4e-14 Score=158.03 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHH--HHhhcCCCChHHHHhhcCcc
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDA--LRILGNQATFDETRILGAFR 289 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~--~~ll~~~~~~~~~~~l~~i~ 289 (850)
..+.+.|.+.+++.|++|+++++|++|+.++++|.|++.+| ++.||.||+|++.+.. ...+.. .++
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~-----------~~~ 231 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGL-----------NNA 231 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTC-----------CCC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCC-----------CCc
Confidence 57889999999999999999999999999888898888777 7999999999998642 122211 112
Q ss_pred eeecEE-EEecCCCCCCCCCCCcee--eeecccCCCceEEEEeccccCCCCCC--------CCceEEecCCCCCCcccee
Q 038410 290 YVYRDV-FLHRDKNFMPQNPAAWSA--WNFVGSTNGKICLTYCLNVLQNIGET--------SMPFLATLNPDRTPQNTLL 358 (850)
Q Consensus 290 ~~~~~v-~l~~d~~~~p~~~~~~~s--~~~~~~~~~~~~~~~~~~~l~~l~~~--------~~~~~~~l~~~~~~~~~~~ 358 (850)
..+... ++.++..--+.....+.. +.++ .+++...+..... ....... +.+.+..+.|......+..
T Consensus 232 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~vG~~~~-~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~ 309 (382)
T 1ryi_A 232 FLPVKGECLSVWNDDIPLTKTLYHDHCYIVP-RKSGRLVVGATMK-PGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDR 309 (382)
T ss_dssp CEEEEEEEEEEECCSSCCCSEEEETTEEEEE-CTTSEEEEECCCE-ETCCCCSCCHHHHHHHHHHHHHHCGGGGGSEEEE
T ss_pred eeccceEEEEECCCCCCccceEEcCCEEEEE-cCCCeEEEeeccc-ccCCCCCCCHHHHHHHHHHHHHhCCCcCCCceee
Confidence 222111 122221100001111211 1222 1233333332111 0011100 0000111112111222445
Q ss_pred eEEeccCCCChHHHHHHHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhcccc
Q 038410 359 KWSTGHSVPSVAASKASLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKS 417 (850)
Q Consensus 359 ~w~~~~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~ 417 (850)
.|...+|.-. +..+.+......+|+|+++++.|.|+ ..|+.+|+.+|+.|++..
T Consensus 310 ~w~g~~~~t~----d~~p~ig~~~~~~~l~~~~G~~g~G~-~~a~~~g~~la~~i~~~~ 363 (382)
T 1ryi_A 310 FWAGLRPGTK----DGKPYIGRHPEDSRILFAAGHFRNGI-LLAPATGALISDLIMNKE 363 (382)
T ss_dssp EEEEEEEECS----SSCCEEEEETTEEEEEEEECCSSCTT-TTHHHHHHHHHHHHTTCC
T ss_pred EEEEecccCC----CCCcEeccCCCcCCEEEEEcCCcchH-HHhHHHHHHHHHHHhCCC
Confidence 6765554311 11122222333569999999999999 799999999999999876
No 163
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.53 E-value=3.5e-14 Score=142.48 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=90.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCCCccEEEEe
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVKKYDTIISC 689 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~~fD~v~s~ 689 (850)
.++.+|||||||+|.++..+|+. ++++|+|||+|+++++.|++++++.+++ +++++++|+.+++ ++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 46789999999999999999998 6899999999999999999999998885 7999999998864 45789999987
Q ss_pred cchhhhChh------hHHHHHHHHHhccccCeEEEEEE
Q 038410 690 EMIENVGHE------YIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 690 ~~~~~~~~~------~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
....+.... ....+++++.++|||||.+++.+
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 654333211 13689999999999999999854
No 164
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.53 E-value=1.8e-14 Score=143.19 Aligned_cols=107 Identities=11% Similarity=0.124 Sum_probs=91.1
Q ss_pred CCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEEcccCCCC---CCCC-ccEEEEe
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQ-DHIRLYLCDYRQMP---EVKK-YDTIISC 689 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~-~~v~~~~~D~~~~~---~~~~-fD~v~s~ 689 (850)
++.+|||+|||+|.++..++++...+|+|+|+|+++++.|+++++..++. ++++++++|+.++. .+++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 67899999999999999988773359999999999999999999999884 58999999987753 2478 9999999
Q ss_pred cchhhhChhhHHHHHHHH--HhccccCeEEEEEEecC
Q 038410 690 EMIENVGHEYIEEFFGCC--ESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~--~r~LkpgG~~~~~~~~~ 724 (850)
..++ . .....+++.+ .++|||||.+++.....
T Consensus 133 ~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8854 3 4578889999 67899999999977654
No 165
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.52 E-value=3.2e-14 Score=155.90 Aligned_cols=158 Identities=14% Similarity=0.123 Sum_probs=121.8
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
....+++.+. ++++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++. .+++++.+|+.+ +.+
T Consensus 196 ~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~ 266 (372)
T 1fp1_D 196 EMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVP 266 (372)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCC
Confidence 3467777775 778899999999999999999998 6789999999 9999887642 379999999987 422
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCC----cCccccccccccCCCCCCCHHHHH
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGH----RLSPGFITEYVFPGGCLPSLNRIT 756 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~p~~~~~~~~~~~ 756 (850)
. ||+|++..+++|++++....++++++++|||||++++.++..++...... ....++.. ...+++...+..++.
T Consensus 267 ~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~t~~e~~ 344 (372)
T 1fp1_D 267 Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLM-FITVGGRERTEKQYE 344 (372)
T ss_dssp C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHH-HHHHSCCCEEHHHHH
T ss_pred C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHH-HhccCCccCCHHHHH
Confidence 3 99999999999998876669999999999999999999887655432110 00011100 113456677899998
Q ss_pred HHHhcCCceEEEEeee
Q 038410 757 SAMTSSSRLCVEHLEN 772 (850)
Q Consensus 757 ~~~~~~~gf~v~~~~~ 772 (850)
+.+.+ +||+++++..
T Consensus 345 ~ll~~-aGf~~~~~~~ 359 (372)
T 1fp1_D 345 KLSKL-SGFSKFQVAC 359 (372)
T ss_dssp HHHHH-TTCSEEEEEE
T ss_pred HHHHH-CCCceEEEEE
Confidence 88776 7999888766
No 166
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.52 E-value=3.2e-14 Score=139.82 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=97.0
Q ss_pred HHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC----
Q 038410 604 VSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---- 678 (850)
Q Consensus 604 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---- 678 (850)
.+.+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++..++.++++++++|+.+..
T Consensus 32 ~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (187)
T 2fhp_A 32 KESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY 111 (187)
T ss_dssp HHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH
Confidence 345566653 467889999999999999999887457999999999999999999999988778999999987742
Q ss_pred -CCCCccEEEEecchhhhChhhHHHHHHHH--HhccccCeEEEEEEecC
Q 038410 679 -EVKKYDTIISCEMIENVGHEYIEEFFGCC--ESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 679 -~~~~fD~v~s~~~~~~~~~~~~~~~~~~~--~r~LkpgG~~~~~~~~~ 724 (850)
.+++||+|++...++. ......++.+ .++|||||.+++.....
T Consensus 112 ~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 112 EEKLQFDLVLLDPPYAK---QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HTTCCEEEEEECCCGGG---CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hcCCCCCEEEECCCCCc---hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 1578999999988552 2356777777 89999999999976553
No 167
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.52 E-value=8.5e-14 Score=151.43 Aligned_cols=132 Identities=18% Similarity=0.294 Sum_probs=107.3
Q ss_pred eecccCCCCCCHHHHHHHHHHHHHHHcC--CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 038410 585 SCAIFKSEYEDLDVAQMRKVSLLIEKAR--VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAG 662 (850)
Q Consensus 585 s~~~~~~~~~~l~~aq~~~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~g 662 (850)
..+.|.....+. .....++.+.+.+. ..++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.|+++++.++
T Consensus 203 ~pgvFs~~~~d~--~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~ 279 (381)
T 3dmg_A 203 LPGVFSAGKVDP--ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANA 279 (381)
T ss_dssp CTTCTTTTSCCH--HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTT
T ss_pred CCCceeCCCCCH--HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcC
Confidence 345555443332 23445555555542 357889999999999999999998 8999999999999999999999988
Q ss_pred CCCCEEEEEcccCCCC-CCCCccEEEEecchhh---hChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 663 LQDHIRLYLCDYRQMP-EVKKYDTIISCEMIEN---VGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 663 l~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~---~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+ +++++++|+.+.. ++++||+|+++..+++ +..+....+++++.++|||||++++..
T Consensus 280 ~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 280 L--KAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp C--CCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--CeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 7 4899999999887 4589999999999988 334668899999999999999999964
No 168
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.52 E-value=1.5e-13 Score=136.59 Aligned_cols=106 Identities=22% Similarity=0.237 Sum_probs=91.8
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccC-CCCCCCCccEEEEec
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYR-QMPEVKKYDTIISCE 690 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~-~~~~~~~fD~v~s~~ 690 (850)
+++|.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|.. .+++..+||+|++.+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 468899999999999999999998 456899999999999999999999999989999999975 454333799999887
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
|-. +....++..+.+.|+|+|+++++..
T Consensus 93 ~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 93 MGG----RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ECH----HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CCh----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 643 3368899999999999999999655
No 169
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.52 E-value=3.4e-14 Score=155.24 Aligned_cols=116 Identities=19% Similarity=0.226 Sum_probs=100.4
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~f 683 (850)
+.+.+.+.+.++.+|||||||+|.++..+++. |+ +|+|||+| ++++.|+++++.++++++++++++|+++++.+++|
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 130 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKV 130 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcc
Confidence 45555567788999999999999999999998 66 99999999 99999999999999998999999999998844899
Q ss_pred cEEEEecchhhhCh-hhHHHHHHHHHhccccCeEEEEEEe
Q 038410 684 DTIISCEMIENVGH-EYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 684 D~v~s~~~~~~~~~-~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
|+|++..+.+++.. ..+..+++++.++|||||.+++...
T Consensus 131 D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 131 DVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred eEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99999776665532 3578899999999999999987544
No 170
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=1e-13 Score=137.91 Aligned_cols=106 Identities=23% Similarity=0.226 Sum_probs=93.1
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEec
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCE 690 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~ 690 (850)
+++|.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|..+.. +.++||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 468899999999999999999998 346899999999999999999999999999999999987765 334799999887
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
|.-.+ ...++....+.|+++|+++++.+
T Consensus 99 mGg~l----I~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 99 MGGRL----IADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp ECHHH----HHHHHHHTGGGGTTCCEEEEEES
T ss_pred CchHH----HHHHHHHHHHHhCcCCEEEEECC
Confidence 76543 68899999999999999999664
No 171
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.52 E-value=4.2e-13 Score=153.18 Aligned_cols=113 Identities=11% Similarity=0.118 Sum_probs=82.9
Q ss_pred CCCcHHHHHhhcCCCHHHHHHHHhhhhcccccCCcchhccCCHHHHH----HHHHHhhhcCCCcEEEecCChHHHHHHHH
Q 038410 144 RNETLGHFIKSRGYSELFLKAYLIPICSSVWSCPSDGAMRFSAFSVL----SFCRLFQLFGHPQCVTVRRHSHSQIDKVS 219 (850)
Q Consensus 144 ~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~~gG~~~l~~~L~ 219 (850)
+..++.+|+++.+.++.+...+...+ +++.... .++...+ .++..+..++...+.++.||++.|+++|+
T Consensus 313 d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~~~~-----~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~L~qaL~ 385 (650)
T 1vg0_A 313 EGTTFSEYLKTQKLTPNLQYFVLHSI--AMTSETT-----SCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFC 385 (650)
T ss_dssp TTSBHHHHHTTSSSCHHHHHHHHHHT--TC--CCS-----CBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTHHHHHHH
T ss_pred ccCCHHHHHHHhCCCHHHHHHHHHHH--hccCCCC-----CchhHHHHHHHHHHHHHHhhccCceEEeCCchhHHHHHHH
Confidence 47899999999988888766554433 3332221 1233332 23323333555689999999999999999
Q ss_pred HHhhccCceEeeCCceEEEEecC--Cce-EEEeeCCcEEeCCEEEEe
Q 038410 220 EQLKSWGIQIRMSCEVYSVFPAD--EGC-SIVCVNGSQEFYNGCVMA 263 (850)
Q Consensus 220 ~~l~~~G~~i~~~~~V~~I~~~~--~~v-~V~~~~G~~i~ad~VV~A 263 (850)
+.++..|++|++|++|++|..++ +++ .|++.+|+++.||+||++
T Consensus 386 r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 386 RMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred HHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 99999999999999999999887 665 455677999999999983
No 172
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.52 E-value=1.4e-14 Score=159.22 Aligned_cols=56 Identities=16% Similarity=0.171 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+++.|.+.+++.|++|+.+++|++|+.+++++.|++.+|+ +.||+||+|++++.
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccH
Confidence 478889999999999999999999999998888999988885 99999999999875
No 173
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.52 E-value=7.5e-14 Score=146.09 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=105.6
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEM 691 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~ 691 (850)
++++.+|||+|||+|.++..+++. +. +|+|+|+|+++++.|+++++.+++.++++++++|+.++...++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~-~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 467999999999999999999998 54 6999999999999999999999998889999999999876689999999654
Q ss_pred hhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEE
Q 038410 692 IENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEH 769 (850)
Q Consensus 692 ~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 769 (850)
.. ...+++++.++|||||.+++.+....... .-....++.+.+.+ .|+.+..
T Consensus 202 ~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-------------------~~~~~~~i~~~~~~-~G~~~~~ 253 (278)
T 2frn_A 202 VR------THEFIPKALSIAKDGAIIHYHNTVPEKLM-------------------PREPFETFKRITKE-YGYDVEK 253 (278)
T ss_dssp SS------GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-------------------TTTTHHHHHHHHHH-TTCEEEE
T ss_pred hh------HHHHHHHHHHHCCCCeEEEEEEeeccccc-------------------cccHHHHHHHHHHH-cCCeeEE
Confidence 22 35789999999999999999877632111 01234556555654 6998876
No 174
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=3.6e-14 Score=144.72 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
...+.+++.+.++++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...+ +++++++|+.+.. .+
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccC
Confidence 45567888888999999999999999999999998 6899999999999999999987665 7999999988733 45
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
++||+|++..+++|+.+ ++.++|||||++++.....
T Consensus 133 ~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcCC
Confidence 78999999999999853 5889999999999976543
No 175
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.52 E-value=6.1e-14 Score=151.01 Aligned_cols=112 Identities=25% Similarity=0.304 Sum_probs=96.7
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~f 683 (850)
+.+.+.+.+.++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++++|+.+++ ++++|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 45556666788999999999999999999998334999999996 99999999999999889999999999987 55899
Q ss_pred cEEEEecc---hhhhChhhHHHHHHHHHhccccCeEEEE
Q 038410 684 DTIISCEM---IENVGHEYIEEFFGCCESLLAEHGLLLL 719 (850)
Q Consensus 684 D~v~s~~~---~~~~~~~~~~~~~~~~~r~LkpgG~~~~ 719 (850)
|+|++..+ +.|. ..+..+++++.++|||||+++.
T Consensus 133 D~Ivs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 133 DVIISEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEEECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEcCchhhccCH--HHHHHHHHHHHhhcCCCcEEEc
Confidence 99999874 4443 4578899999999999999983
No 176
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.52 E-value=2.1e-14 Score=145.32 Aligned_cols=109 Identities=19% Similarity=0.225 Sum_probs=92.9
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C-CC-----CCc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P-EV-----KKY 683 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~-~~-----~~f 683 (850)
..++.+|||||||+|..+..+++. ++++|++||+|+++++.|+++++..++.++++++++|+.+. + .. ++|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 356789999999999999999986 47899999999999999999999999988899999997553 2 11 689
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
|+|++....++. .....+++.+ ++|||||++++.++..
T Consensus 136 D~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 136 DMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 999999877776 3355778888 9999999999976654
No 177
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.52 E-value=3.1e-14 Score=154.03 Aligned_cols=114 Identities=24% Similarity=0.259 Sum_probs=96.6
Q ss_pred HHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccE
Q 038410 607 LIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDT 685 (850)
Q Consensus 607 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~ 685 (850)
+.+...+.++.+|||||||+|.++..+++....+|+|+|+| ++++.|+++++.++++++++++++|+++++ ++++||+
T Consensus 58 i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 136 (349)
T 3q7e_A 58 MFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDI 136 (349)
T ss_dssp HHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEE
T ss_pred HHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEE
Confidence 33333456789999999999999999999833499999999 599999999999999988999999999988 6689999
Q ss_pred EEEecchhhh-ChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 686 IISCEMIENV-GHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 686 v~s~~~~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|++..+..++ ....+..+++++.++|||||+++...
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 9998765544 22457899999999999999998543
No 178
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=6.5e-14 Score=138.10 Aligned_cols=114 Identities=18% Similarity=0.272 Sum_probs=99.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MPEVK 681 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~~~~ 681 (850)
....+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.++++++..++.+++++.++|+.+ ++..+
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIP 99 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHh-cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCC
Confidence 3456777788899999999999999999999997 589999999999999999999999887799999999876 33325
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|++..+++++ ..+++++.++|||||.+++...
T Consensus 100 ~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 100 DIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEec
Confidence 89999999887654 7899999999999999998654
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=6.5e-14 Score=153.08 Aligned_cols=122 Identities=13% Similarity=0.147 Sum_probs=99.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CCEEEEE
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYT-------ETKVKEAGLQ-DHIRLYL 671 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a-------~~~~~~~gl~-~~v~~~~ 671 (850)
...+..+++.+.++++++|||||||+|.++..+|+..+ .+|+|||+|+++++.| +++++..|+. +++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 34556788889999999999999999999999999744 5899999999999999 8898888864 6899999
Q ss_pred cccCCCC-----CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 672 CDYRQMP-----EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 672 ~D~~~~~-----~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+|....+ ..++||+|+++..+ +. .++...++++.++|||||++++.+...+
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cCccccccccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 8644321 24689999987665 32 4578899999999999999999754433
No 180
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=1.2e-15 Score=156.84 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=93.6
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE 693 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~ 693 (850)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++.++++++++|+.+++++++||+|++..+++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred cCCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 47899999999999999999997 89999999999999999999999998779999999998877667999999999999
Q ss_pred hhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 694 NVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 694 ~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
|.+. ....+.+++++|||||.+++.
T Consensus 156 ~~~~--~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GPDY--ATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SGGG--GGSSSBCTTTSCSSCHHHHHH
T ss_pred Ccch--hhhHHHHHHhhcCCcceeHHH
Confidence 9854 455778899999999997763
No 181
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.51 E-value=9.1e-14 Score=139.82 Aligned_cols=107 Identities=23% Similarity=0.328 Sum_probs=91.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCCCccEEEEe
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVKKYDTIISC 689 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~~fD~v~s~ 689 (850)
.++.+|||||||+|.++..+++. ++++|+|||+|+++++.|++++...++ ++++++++|+.+++ ++++||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 46789999999999999999998 678999999999999999999999888 48999999998865 45789999999
Q ss_pred cchhhhChh------hHHHHHHHHHhccccCeEEEEEE
Q 038410 690 EMIENVGHE------YIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 690 ~~~~~~~~~------~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
....+...+ ....+++++.++|||||.+++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 765443211 23689999999999999999853
No 182
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.51 E-value=8.5e-13 Score=138.65 Aligned_cols=56 Identities=36% Similarity=0.602 Sum_probs=53.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcceEEeeCCeeeecceeecc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFN 57 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~ 57 (850)
||+|||||+|||+||+.|+++|++|+||||++.+||++.+.+..+..+|.|++.+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 89999999999999999999999999999999999999999999999999998874
No 183
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.51 E-value=5.2e-14 Score=144.45 Aligned_cols=102 Identities=13% Similarity=0.152 Sum_probs=89.9
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC----CCCccEEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE----VKKYDTII 687 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~----~~~fD~v~ 687 (850)
+.++.+|||||||+|..++.+|.. ++++|+++|+|+++++.|++++++.++. +|+++++|+++++. .++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 467889999999999999999987 7899999999999999999999999997 59999999988762 37899999
Q ss_pred EecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 688 SCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 688 s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|..+ .++..+++.+.++|||||++++..
T Consensus 157 s~a~------~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 157 ARAV------APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESS------CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCc------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 9753 236889999999999999998743
No 184
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.7e-13 Score=134.03 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=96.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
...+.+++.+.+.++.+|||+|||+|.++..+++ ++.+|+|+|+|+++++.|+++++..+++ +++++++|+.+..+++
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~ 99 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAEDVLDKL 99 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHHHGGGC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccccccCC
Confidence 3445777888888999999999999999999999 5899999999999999999999998884 7999999987732447
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|++..+ .++..+++++.++ |||.+++...
T Consensus 100 ~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 100 EFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp CCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 8999999988 3468899999999 9999999664
No 185
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.50 E-value=3.8e-14 Score=156.40 Aligned_cols=202 Identities=12% Similarity=0.036 Sum_probs=109.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEeeCCcEEeCCEEEEecChHHH--HHhhcCCCChHHHHhhcCc
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVCVNGSQEFYNGCVMAVHAPDA--LRILGNQATFDETRILGAF 288 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~~~--~~ll~~~~~~~~~~~l~~i 288 (850)
..++..|.+.+++.|++|+.+++|++|+.++++|. |++.+| +++||+||+|++.+.. .+.+.... .+
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~---------~~ 218 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT---------KI 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS---------CC
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc---------Cc
Confidence 57888999999999999999999999999888887 888877 6999999999998752 22222100 02
Q ss_pred ceeecEE-EEecCCC-CCCCCCCCce---eeeecc-cCCCceEEEE-eccccCCCCCCC-----Cce---EEecCCCCCC
Q 038410 289 RYVYRDV-FLHRDKN-FMPQNPAAWS---AWNFVG-STNGKICLTY-CLNVLQNIGETS-----MPF---LATLNPDRTP 353 (850)
Q Consensus 289 ~~~~~~v-~l~~d~~-~~p~~~~~~~---s~~~~~-~~~~~~~~~~-~~~~l~~l~~~~-----~~~---~~~l~~~~~~ 353 (850)
+..+... ++.++.. -+......+. ...|.. .+++ ..+.. ............ ..+ +..+.|....
T Consensus 219 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~ 297 (382)
T 1y56_B 219 PIEPYKHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPALKN 297 (382)
T ss_dssp CCEEEEEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGGGGG
T ss_pred CCCeeEeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcCC
Confidence 2222111 1122211 0001011111 011111 1233 33331 011000110000 000 0111111112
Q ss_pred ccceeeEEeccCCCChHHHHHHHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhccccccccCCCCCcchhh
Q 038410 354 QNTLLKWSTGHSVPSVAASKASLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKSCAILGNPKQMVPSL 431 (850)
Q Consensus 354 ~~~~~~w~~~~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~~~~~~~p~~~~~~~ 431 (850)
..+...|...+|.- .+..+.+......+|+|++.++.|+|+ ..|...|+.+|+.|++.. ...+..++.|.+
T Consensus 298 ~~~~~~~~g~r~~t----~d~~p~ig~~~~~~~~~~~~G~~g~G~-~~a~~~g~~la~~i~~~~--~~~~~~~~~~~R 368 (382)
T 1y56_B 298 LLILRTWAGYYAKT----PDSNPAIGRIEELNDYYIAAGFSGHGF-MMAPAVGEMVAELITKGK--TKLPVEWYDPYR 368 (382)
T ss_dssp SEEEEEEEEEEEEC----TTSCCEEEEESSSBTEEEEECCTTCHH-HHHHHHHHHHHHHHHHSS--CSSCGGGGCGGG
T ss_pred CCceEEEEeccccC----CCCCcEeccCCCCCCEEEEEecCcchH-hhhHHHHHHHHHHHhCCC--CcCcccccCHhh
Confidence 23445676655532 122233333444679999999999999 699999999999999876 223334444443
No 186
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.49 E-value=2.3e-13 Score=136.39 Aligned_cols=106 Identities=21% Similarity=0.206 Sum_probs=92.5
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC-CCccEEEEec
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV-KKYDTIISCE 690 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~-~~fD~v~s~~ 690 (850)
+++|.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|..+...+ .+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 468899999999999999999998 34589999999999999999999999998999999998776533 3699999877
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
|--. ....++.+..+.|+++++++++..
T Consensus 99 mGg~----lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 99 MGGT----LIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ECHH----HHHHHHHHTGGGGTTCCEEEEEES
T ss_pred CchH----HHHHHHHHHHHHhCCCCEEEEEcC
Confidence 6553 378899999999999999999764
No 187
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.49 E-value=9.4e-14 Score=138.97 Aligned_cols=99 Identities=17% Similarity=0.331 Sum_probs=88.6
Q ss_pred CCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE 693 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~ 693 (850)
++.+|||||||+|.++..+++. ++++|+|+|+|+++++.|+++++..++++ ++++++|+.+.++.++||+|++...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc--
Confidence 4789999999999999999987 67899999999999999999999988864 9999999998876679999998642
Q ss_pred hhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 694 NVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 694 ~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
.++..+++++.++|||||.+++.
T Consensus 142 ----~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 ----ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----CCHHHHHHHHHHhcCCCcEEEEE
Confidence 23689999999999999999985
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.49 E-value=8.2e-14 Score=141.43 Aligned_cols=119 Identities=18% Similarity=0.233 Sum_probs=95.1
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEccc-CCCC-C-CCCccEEEEe
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDY-RQMP-E-VKKYDTIISC 689 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~-~~~~-~-~~~fD~v~s~ 689 (850)
++++.+|||||||+|.++..+++. +++|+|+|+|+.+++.|+++ ..+++++++|+ ..++ + +++||+|++.
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 367899999999999999999998 89999999999999999988 12799999999 4566 4 6899999998
Q ss_pred cchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEE
Q 038410 690 EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEH 769 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 769 (850)
. ++..+++++.++|||||+++. .. ...+..++.+.+.+ +||.+..
T Consensus 119 ~--------~~~~~l~~~~~~LkpgG~l~~--~~------------------------~~~~~~~~~~~l~~-~Gf~~~~ 163 (226)
T 3m33_A 119 R--------GPTSVILRLPELAAPDAHFLY--VG------------------------PRLNVPEVPERLAA-VGWDIVA 163 (226)
T ss_dssp S--------CCSGGGGGHHHHEEEEEEEEE--EE------------------------SSSCCTHHHHHHHH-TTCEEEE
T ss_pred C--------CHHHHHHHHHHHcCCCcEEEE--eC------------------------CcCCHHHHHHHHHH-CCCeEEE
Confidence 2 356889999999999999991 00 01133456666665 6999877
Q ss_pred eeec
Q 038410 770 LENI 773 (850)
Q Consensus 770 ~~~~ 773 (850)
++..
T Consensus 164 ~~~~ 167 (226)
T 3m33_A 164 EDHV 167 (226)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6544
No 189
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=1.2e-13 Score=148.18 Aligned_cols=114 Identities=24% Similarity=0.321 Sum_probs=96.4
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCcc
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYD 684 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD 684 (850)
.+.+.+.+.++.+|||||||+|.++..+++....+|+|+|+| ++++.|+++++.+++.++++++++|+.+++ ++++||
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 107 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVD 107 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEE
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCccc
Confidence 444455566889999999999999999999733499999999 699999999999999889999999999987 558999
Q ss_pred EEEEecchhhh-ChhhHHHHHHHHHhccccCeEEEEE
Q 038410 685 TIISCEMIENV-GHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 685 ~v~s~~~~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
+|++..+.+++ ....+..+++++.++|||||+++..
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 99998765544 2345788999999999999999853
No 190
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.48 E-value=7.5e-14 Score=161.09 Aligned_cols=119 Identities=17% Similarity=0.223 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EV 680 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~ 680 (850)
++.+.+.+ ..+.+|||||||.|.++..+|++ |++|+|||+|+.+++.|+..+.+.|.. +|+++++|++++. .+
T Consensus 57 ~~~~~~~~--~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (569)
T 4azs_A 57 YDNLSRAL--GRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEE 132 (569)
T ss_dssp HHHHHHHH--TSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCT
T ss_pred HHHHHhhc--CCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccC
Confidence 34444443 35679999999999999999998 999999999999999999999887743 7999999999873 45
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
++||+|++.+|+|||++......+..+.+.|+++|+.++..+....
T Consensus 133 ~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 133 GEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp TSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred CCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 7999999999999996643334456678889999998888776543
No 191
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=8.9e-14 Score=144.07 Aligned_cols=116 Identities=14% Similarity=0.237 Sum_probs=96.0
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH---cCCCCCEEEEEcccCCCC---
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE---AGLQDHIRLYLCDYRQMP--- 678 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~---~gl~~~v~~~~~D~~~~~--- 678 (850)
.+...+..+++.+|||||||+|.++..++++ ++.+|+|||+++++++.|+++++. +++.++++++++|+.+..
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR 106 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhh
Confidence 3445566778899999999999999999998 568999999999999999999988 888888999999998871
Q ss_pred -----CCCCccEEEEecchhhh----------------ChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 679 -----EVKKYDTIISCEMIENV----------------GHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 679 -----~~~~fD~v~s~~~~~~~----------------~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
++++||+|+++..+... ....+..+++.+.++|||||++++..
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 35789999998544332 22347889999999999999999843
No 192
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=6.3e-13 Score=133.35 Aligned_cols=141 Identities=17% Similarity=0.118 Sum_probs=97.7
Q ss_pred cCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC----CCCCcc
Q 038410 611 ARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP----EVKKYD 684 (850)
Q Consensus 611 l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~----~~~~fD 684 (850)
+.+++|++|||+|||+|.++.++|+. +..+|+|+|+|+.|++...+.+++. .++.++++|++... ..++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 45899999999999999999999987 4679999999999987665555543 38999999987643 246899
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCc
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSR 764 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 764 (850)
+|++.... + .....+...+.++|||||++++..-... .+. .+.|.- ...+....+.+ +|
T Consensus 149 ~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~---~d~----------t~~~~e---~~~~~~~~L~~-~g 207 (232)
T 3id6_C 149 VLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARS---IDV----------TKDPKE---IYKTEVEKLEN-SN 207 (232)
T ss_dssp EEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC--------------------CCSSS---STTHHHHHHHH-TT
T ss_pred EEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCC---ccc----------CCCHHH---HHHHHHHHHHH-CC
Confidence 99998554 2 2234455667779999999999632111 000 000110 11234456665 59
Q ss_pred eEEEEeeecCC
Q 038410 765 LCVEHLENIGI 775 (850)
Q Consensus 765 f~v~~~~~~~~ 775 (850)
|++.+..++.+
T Consensus 208 f~~~~~~~l~p 218 (232)
T 3id6_C 208 FETIQIINLDP 218 (232)
T ss_dssp EEEEEEEECTT
T ss_pred CEEEEEeccCC
Confidence 99998877643
No 193
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=9.2e-14 Score=143.42 Aligned_cols=120 Identities=12% Similarity=0.117 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh---cCCEEEEEeCCHHHHHHHHHHHHHc---CCCCC---------
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYTETKVKEA---GLQDH--------- 666 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~gid~s~~~~~~a~~~~~~~---gl~~~--------- 666 (850)
..++.+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+++++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 45566666665557789999999999999999986 4679999999999999999988765 44322
Q ss_pred ----------------EE-------------EEEcccCCCC------CCCCccEEEEecchhhhCh-------hhHHHHH
Q 038410 667 ----------------IR-------------LYLCDYRQMP------EVKKYDTIISCEMIENVGH-------EYIEEFF 704 (850)
Q Consensus 667 ----------------v~-------------~~~~D~~~~~------~~~~fD~v~s~~~~~~~~~-------~~~~~~~ 704 (850)
++ +.++|+.+.. ..++||+|+++..+.+..+ +.+..++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 66 9999987754 2348999999987665532 5577999
Q ss_pred HHHHhccccCeEEEEEE
Q 038410 705 GCCESLLAEHGLLLLQF 721 (850)
Q Consensus 705 ~~~~r~LkpgG~~~~~~ 721 (850)
+++.++|||||++++..
T Consensus 198 ~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 198 RSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHSCTTCEEEEEE
T ss_pred HHHHHhcCCCcEEEEeC
Confidence 99999999999999843
No 194
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=2.1e-13 Score=136.22 Aligned_cols=104 Identities=20% Similarity=0.184 Sum_probs=84.5
Q ss_pred cCCCCCCeEEEEccCccHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC----CCCCCccE
Q 038410 611 ARVNKGLDVLEIGCGWGTLAIEIVKQT-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM----PEVKKYDT 685 (850)
Q Consensus 611 l~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~----~~~~~fD~ 685 (850)
+.+++|++|||||||+|.++..+++.. +.+|+|+|+|+++++.+.++++.. .++.++++|+.+. +..++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeE
Confidence 567899999999999999999999873 479999999999988777776653 3799999998774 33478999
Q ss_pred EEEecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 686 IISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 686 v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|++.. ..+ .....++++++++|||||++++..
T Consensus 130 V~~~~-~~~---~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDI-AQK---NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECC-CST---THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEec-cCh---hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99973 222 234567999999999999999963
No 195
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.48 E-value=5e-13 Score=140.15 Aligned_cols=116 Identities=15% Similarity=0.273 Sum_probs=92.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeC-CHHHHHHHHHHH-----HHcCCC----CCEEEE
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITL-SEEQLKYTETKV-----KEAGLQ----DHIRLY 670 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~-s~~~~~~a~~~~-----~~~gl~----~~v~~~ 670 (850)
...+.+.+.....++.+|||||||+|.+++.+++. ++ +|+|+|+ |+++++.|++++ +..++. +++++.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 34455666555678899999999999999999987 65 9999999 899999999999 556654 578998
Q ss_pred EcccCCCC-------CCCCccEEEEecchhhhChhhHHHHHHHHHhccc---c--CeEEEEE
Q 038410 671 LCDYRQMP-------EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLA---E--HGLLLLQ 720 (850)
Q Consensus 671 ~~D~~~~~-------~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~Lk---p--gG~~~~~ 720 (850)
..|..+.. .+++||+|++..+++|. .++..+++.+.++|| | ||++++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 77765532 24789999999999997 558999999999999 9 9998874
No 196
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=1.7e-13 Score=142.01 Aligned_cols=112 Identities=20% Similarity=0.249 Sum_probs=98.6
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
...++..++++++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++..|++++++++++|+.+..+++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 347788889999999999999999999999987 378999999999999999999999999878999999998765667
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|++. .+ +...+++++.++|||||++++...
T Consensus 162 ~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 162 NVDHVILD-----LP--QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp SEEEEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 89999983 33 346789999999999999998653
No 197
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.48 E-value=2.6e-13 Score=142.22 Aligned_cols=117 Identities=15% Similarity=0.290 Sum_probs=97.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
..++.+++.+. .++.+|||||||+|.++..+++. ++++|+|+|+|+++++.|+++++..+++ +++++++|+.+..++
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTT
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhccc
Confidence 34556777766 67889999999999999999977 6789999999999999999999998886 799999998775445
Q ss_pred CCccEEEEec-------------chhhhCh----------hhHHHHHHHHHhccccCeEEEEE
Q 038410 681 KKYDTIISCE-------------MIENVGH----------EYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 681 ~~fD~v~s~~-------------~~~~~~~----------~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
++||+|+++. +++|.+. +.+..+++++.++|||||++++.
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7899999983 3333331 35688999999999999999984
No 198
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.48 E-value=1.4e-13 Score=144.24 Aligned_cols=134 Identities=16% Similarity=0.246 Sum_probs=104.8
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCEEEEEcccCCCCCCC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEA-GLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-gl~~~v~~~~~D~~~~~~~~ 681 (850)
+.+++.+.++++.+|||+|||+|.++..+++. ++.+|+|+|+|+++++.|+++++.. |. ++++++++|+.+..+++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQ 178 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCC
Confidence 46778888999999999999999999999987 4789999999999999999999887 74 48999999998844567
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhc
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTS 761 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 761 (850)
+||+|++ |++ ++..+++++.++|||||++++.+.... ...++.+.+.+
T Consensus 179 ~fD~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~-------------------------~~~~~~~~l~~ 226 (275)
T 1yb2_A 179 MYDAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPNFD-------------------------QSEKTVLSLSA 226 (275)
T ss_dssp CEEEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESSHH-------------------------HHHHHHHHSGG
T ss_pred CccEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCCHH-------------------------HHHHHHHHHHH
Confidence 8999998 454 357899999999999999999653210 13455556664
Q ss_pred CCceEEEEeee
Q 038410 762 SSRLCVEHLEN 772 (850)
Q Consensus 762 ~~gf~v~~~~~ 772 (850)
.||.+.+...
T Consensus 227 -~Gf~~~~~~~ 236 (275)
T 1yb2_A 227 -SGMHHLETVE 236 (275)
T ss_dssp -GTEEEEEEEE
T ss_pred -CCCeEEEEEE
Confidence 6998776654
No 199
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.48 E-value=1.7e-13 Score=152.52 Aligned_cols=199 Identities=14% Similarity=0.139 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecChHHH--HHhhcCCCChHHHHhhcCc
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHAPDA--LRILGNQATFDETRILGAF 288 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~~~~--~~ll~~~~~~~~~~~l~~i 288 (850)
..+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||.||+|++.+.. .+.+.. .+
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~-----------~~ 241 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF-----------EL 241 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC-----------CC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC-----------CC
Confidence 378889999999999999999999999998776 57888888 6999999999998642 222221 11
Q ss_pred ceeecEE-EEecCCCCCCC-CCCCce--eeeecc-cCCCceEEEEeccccCCCCCC-----CC---ceEEecCCCCCCcc
Q 038410 289 RYVYRDV-FLHRDKNFMPQ-NPAAWS--AWNFVG-STNGKICLTYCLNVLQNIGET-----SM---PFLATLNPDRTPQN 355 (850)
Q Consensus 289 ~~~~~~v-~l~~d~~~~p~-~~~~~~--s~~~~~-~~~~~~~~~~~~~~l~~l~~~-----~~---~~~~~l~~~~~~~~ 355 (850)
+..+... ++.++. +-+. ....+. ...|.. .+++...+............. .. +.+..+.|......
T Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~ 320 (405)
T 2gag_B 242 PIQSHPLQALVSEL-FEPVHPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFARAH 320 (405)
T ss_dssp CEEEEEEEEEEEEE-BCSCCCSEEEETTTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGGGGCE
T ss_pred CccccceeEEEecC-CccccCceEEeCCCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCccccCC
Confidence 1222111 111111 0000 000000 011111 133444443322111111000 00 00111112111222
Q ss_pred ceeeEEeccCCCChHHHHHHHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhccccccccCCCCCcchhh
Q 038410 356 TLLKWSTGHSVPSVAASKASLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKSCAILGNPKQMVPSL 431 (850)
Q Consensus 356 ~~~~w~~~~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~~~~~~~p~~~~~~~ 431 (850)
+...|...+|.- .+..+.+... +.+|+|++.++.|+|+ ..|...|+.+|+.|.+.. ...+..++.|.+
T Consensus 321 ~~~~w~g~~~~t----~d~~p~ig~~-~~~~l~~~~G~~g~G~-~~a~~~g~~la~~i~g~~--~~~~~~~~~~~R 388 (405)
T 2gag_B 321 VLRTWGGIVDTT----MDASPIISKT-PIQNLYVNCGWGTGGF-KGTPGAGFTLAHTIANDE--PHELNKPFSLER 388 (405)
T ss_dssp ECEEEEEEEEEE----TTSCCEEEEC-SSBTEEEEECCGGGCS-TTHHHHHHHHHHHHHHTS--CCTTTTTSCSTH
T ss_pred cceEEeeccccC----CCCCCEeccc-CCCCEEEEecCCCchh-hHHHHHHHHHHHHHhCCC--CCccccccCcch
Confidence 445676555531 1111222222 1579999999999999 699999999999999876 223444455543
No 200
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.48 E-value=1.1e-13 Score=140.72 Aligned_cols=108 Identities=17% Similarity=0.205 Sum_probs=89.8
Q ss_pred HHH---HHHcCCCCCCeEEEEccCccHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC----
Q 038410 605 SLL---IEKARVNKGLDVLEIGCGWGTLAIEIVKQT-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ---- 676 (850)
Q Consensus 605 ~~~---~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~---- 676 (850)
..+ ++.+.++++.+|||||||+|.++..+++.. ..+|+|+|+|+++++.|+++++.. ++++++++|+.+
T Consensus 61 ~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~ 137 (230)
T 1fbn_A 61 AAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEY 137 (230)
T ss_dssp HHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGG
T ss_pred HHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccc
Confidence 455 566677899999999999999999999983 479999999999999999987654 489999999988
Q ss_pred CCCCCCccEEEEecchhhhCh-hhHHHHHHHHHhccccCeEEEEE
Q 038410 677 MPEVKKYDTIISCEMIENVGH-EYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 677 ~~~~~~fD~v~s~~~~~~~~~-~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
.+..++||+|+ +++++ .....+++++.++|||||++++.
T Consensus 138 ~~~~~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ANIVEKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTTSCCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 66337899999 33432 22377899999999999999996
No 201
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=1.2e-13 Score=142.08 Aligned_cols=108 Identities=13% Similarity=0.110 Sum_probs=93.0
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C---CCCCccEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P---EVKKYDTI 686 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~---~~~~fD~v 686 (850)
+.++.+|||||||+|..+..+++. + +++|+++|+|+++++.|++++++.|+.++|+++++|+.+. + ..++||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 356789999999999999999998 3 7899999999999999999999999988999999998663 2 23589999
Q ss_pred EEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 687 ISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 687 ~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
++... ..++..+++++.++|||||++++.++...
T Consensus 141 ~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 141 FIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 98653 24568899999999999999999776543
No 202
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.47 E-value=6.3e-14 Score=142.02 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=92.6
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-----C-CCCcc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-----E-VKKYD 684 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-----~-~~~fD 684 (850)
..++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..|+.++++++++|+.+.. . .++||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 356789999999999999999998 3 78999999999999999999999999888999999986542 1 26799
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+|++.... ..+..+++++.++|||||.+++.++...
T Consensus 136 ~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 99987653 3468899999999999999998766543
No 203
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=1.2e-13 Score=137.26 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=89.3
Q ss_pred CCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CC-CCCCccEEEEecch
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MP-EVKKYDTIISCEMI 692 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~-~~~~fD~v~s~~~~ 692 (850)
++.+|||+|||+|.+++.++++...+|+|+|+|+++++.|+++++..++ ++++++++|+.+ ++ ..++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 6789999999999999998887335999999999999999999999888 589999999877 34 45789999998774
Q ss_pred hhhChhhHHHHHHHHHh--ccccCeEEEEEEecC
Q 038410 693 ENVGHEYIEEFFGCCES--LLAEHGLLLLQFSSV 724 (850)
Q Consensus 693 ~~~~~~~~~~~~~~~~r--~LkpgG~~~~~~~~~ 724 (850)
+ . .....+++.+.+ +|||||++++.....
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-C--CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4 3 346788888866 599999999976653
No 204
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.47 E-value=2.6e-13 Score=148.83 Aligned_cols=57 Identities=12% Similarity=-0.022 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCC--cEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNG--SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G--~~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++.|++|+++++|++|+.++++ +.|++.+| .++.||+||+|++++.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 578899999999999999999999999998776 88999888 4799999999999884
No 205
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.47 E-value=1.3e-13 Score=140.79 Aligned_cols=113 Identities=23% Similarity=0.346 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MPEV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~~~ 680 (850)
.....+++.+.++++.+|||||||+|.++..+++..+.+|+++|+|+++++.|+++++..++. ++++..+|... ++..
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCC
Confidence 345677888888999999999999999999999984389999999999999999999998886 59999999732 2233
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
.+||+|++..+++++.+ ++.++|||||++++....
T Consensus 157 ~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 46999999999999853 688999999999996654
No 206
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.47 E-value=1.2e-13 Score=141.09 Aligned_cols=113 Identities=21% Similarity=0.289 Sum_probs=96.5
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C-C--C
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P-E--V 680 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~-~--~ 680 (850)
.+...+.+.++.+|||||||+|..+..+++. ++.+|+++|+|+++++.|+++++..|+.++++++++|+.+. + . +
T Consensus 45 ~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 124 (233)
T 2gpy_A 45 SLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELY 124 (233)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTS
T ss_pred HHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccC
Confidence 3333444567889999999999999999998 57899999999999999999999999987899999998875 3 2 5
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|++....+ ++..+++++.++|||||++++.++.
T Consensus 125 ~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 125 PLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp CCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 7899999987654 4689999999999999999997654
No 207
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.46 E-value=4.8e-13 Score=148.37 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+++.|++|+++++|++|+.++++|.|++.+| +++||.||+|++++.
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 46888899988888999999999999999888898888776 699999999999874
No 208
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.46 E-value=7.2e-14 Score=154.58 Aligned_cols=203 Identities=12% Similarity=0.041 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHHHHhhcCCCChHHHHhhcCccee
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDALRILGNQATFDETRILGAFRYV 291 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~i~~~ 291 (850)
..++..|.+.+++.|++|+++++|++|+.+++++.|++.+| ++.||.||+|++.+.. .+++. .. ..++..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~-~g-------~~~pl~ 219 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS-KLLSK-LN-------LDIPLQ 219 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH-HHGGG-GT-------EECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH-HHhhh-hc-------cCCceE
Confidence 47889999999999999999999999999888898888776 6999999999998753 33321 00 012222
Q ss_pred ecEE-EEecCCCC--CC---CCCC-Ccee---eeecc-cCCC-ceEEEEecc-c-cC--CCCCCC----------CceEE
Q 038410 292 YRDV-FLHRDKNF--MP---QNPA-AWSA---WNFVG-STNG-KICLTYCLN-V-LQ--NIGETS----------MPFLA 345 (850)
Q Consensus 292 ~~~v-~l~~d~~~--~p---~~~~-~~~s---~~~~~-~~~~-~~~~~~~~~-~-l~--~l~~~~----------~~~~~ 345 (850)
+... ++.++..- +. ..+. .+.. ..|.. .+++ ...+..... . .. ...... .+.+.
T Consensus 220 ~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 299 (389)
T 2gf3_A 220 PYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLE 299 (389)
T ss_dssp EEEEEEEEECCCHHHHBGGGTCCEEEEEETTEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCcccccccccCCEEEEeCCCCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHH
Confidence 2111 12222210 00 0000 0110 11211 1233 444432110 0 00 000000 00011
Q ss_pred ecCCCCCCccceeeEEeccCCCChHHHHHHHHhhhhcCCCCeEEEccccCCCCCcchhhHHHHHHHHhccccccccCCCC
Q 038410 346 TLNPDRTPQNTLLKWSTGHSVPSVAASKASLELHLIQGKRGIWYSGVDQGYGFPEDGLKVGMIAAHGVLGKSCAILGNPK 425 (850)
Q Consensus 346 ~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~l~~~~~~~~l~~aG~~~g~G~~e~A~~sG~~aA~~ilg~~~~~~~~p~ 425 (850)
.+.|.... .+...|...+|.- .+..+.+......+|+|++.++.|+|+ ..|...|+.+|+.|++.. ...+..
T Consensus 300 ~~~P~l~~-~~~~~w~g~r~~t----~D~~p~ig~~~~~~~l~~a~G~~g~G~-~~ap~~g~~la~~i~~~~--~~~~~~ 371 (389)
T 2gf3_A 300 EYMPGANG-ELKRGAVCMYTKT----LDEHFIIDLHPEHSNVVIAAGFSGHGF-KFSSGVGEVLSQLALTGK--TEHDIS 371 (389)
T ss_dssp HHCGGGCS-CEEEEEEEEEEEC----TTSCCEEEEETTEEEEEEEECCTTCCG-GGHHHHHHHHHHHHHHSC--CSSCCG
T ss_pred HhCCCCCC-CceEEEEEEeccC----CCCCeEEccCCCCCCEEEEECCccccc-cccHHHHHHHHHHHcCCC--CCCCcc
Confidence 11121111 3445676555521 122233333334579999999999999 799999999999999877 333444
Q ss_pred Ccchhhh
Q 038410 426 QMVPSLM 432 (850)
Q Consensus 426 ~~~~~~~ 432 (850)
++.|.++
T Consensus 372 ~~~~~Rf 378 (389)
T 2gf3_A 372 IFSINRP 378 (389)
T ss_dssp GGCTTCG
T ss_pred ccccccc
Confidence 5555543
No 209
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=2.6e-13 Score=130.89 Aligned_cols=120 Identities=13% Similarity=0.073 Sum_probs=95.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE 693 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~ 693 (850)
.++.+|||||||+|.++..++++ + +|+|+|+|+++++. .++++++++|+.+..++++||+|+++..+.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 56779999999999999999997 6 99999999999988 237899999998843558999999999888
Q ss_pred hhChh-------hHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceE
Q 038410 694 NVGHE-------YIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLC 766 (850)
Q Consensus 694 ~~~~~-------~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~ 766 (850)
+.++. +...+++++.+.| |||++++..... ....++.+.+.+ +||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-------------------------~~~~~l~~~l~~-~gf~ 142 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-------------------------NRPKEVLARLEE-RGYG 142 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------GCHHHHHHHHHH-TTCE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-------------------------CCHHHHHHHHHH-CCCc
Confidence 65432 4467888898888 999999966432 134556666665 6998
Q ss_pred EEEeee
Q 038410 767 VEHLEN 772 (850)
Q Consensus 767 v~~~~~ 772 (850)
+..+..
T Consensus 143 ~~~~~~ 148 (170)
T 3q87_B 143 TRILKV 148 (170)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876654
No 210
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.46 E-value=1.8e-13 Score=139.09 Aligned_cols=108 Identities=14% Similarity=0.263 Sum_probs=84.9
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH------cCCCCCEEEEEcccCC-CC---CCC
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE------AGLQDHIRLYLCDYRQ-MP---EVK 681 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~------~gl~~~v~~~~~D~~~-~~---~~~ 681 (850)
..++.+|||||||+|.++..+|+. ++++|+|||+|+.+++.|+++++. .++ .+|+++++|+.+ ++ +++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 456779999999999999999988 678999999999999999998764 344 489999999987 43 468
Q ss_pred CccEEEEecchhhhChhh------HHHHHHHHHhccccCeEEEEEE
Q 038410 682 KYDTIISCEMIENVGHEY------IEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~------~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+||.|++...-.+...+. ...+++++.++|||||.+++.+
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 999999875443321110 1579999999999999999854
No 211
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.46 E-value=2e-13 Score=147.60 Aligned_cols=128 Identities=16% Similarity=0.262 Sum_probs=104.1
Q ss_pred ecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCC
Q 038410 586 CAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQ 664 (850)
Q Consensus 586 ~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~ 664 (850)
.++|..+..+.. .+.+++.+...++.+|||||||+|.++..+++. +.++|+|+|+|+.+++.|++++...++
T Consensus 173 ~gvf~~~~~d~~------~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~- 245 (343)
T 2pjd_A 173 PGVFSRDGLDVG------SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV- 245 (343)
T ss_dssp TTCTTSSSCCHH------HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-
T ss_pred CCccCCCCCcHH------HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-
Confidence 455655443322 246677776667889999999999999999998 457999999999999999999998887
Q ss_pred CCEEEEEcccCCCCCCCCccEEEEecchhh---hChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 665 DHIRLYLCDYRQMPEVKKYDTIISCEMIEN---VGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 665 ~~v~~~~~D~~~~~~~~~fD~v~s~~~~~~---~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
.++++.+|..+.. +++||+|+++.++++ ...+....+++++.++|||||.+++...
T Consensus 246 -~~~~~~~d~~~~~-~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 246 -EGEVFASNVFSEV-KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp -CCEEEECSTTTTC-CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred -CCEEEEccccccc-cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 4678899987654 578999999999876 2335678999999999999999999654
No 212
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.46 E-value=5e-13 Score=138.70 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=109.3
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCEEEEEcccCCCC-CC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEA-GLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-gl~~~v~~~~~D~~~~~-~~ 680 (850)
..+++.+.++++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++.. | .+++++.++|+.+.+ ++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 57788888999999999999999999999987 3789999999999999999999887 7 458999999999885 55
Q ss_pred CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHh
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMT 760 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~ 760 (850)
++||+|++. .+ +...+++++.++|||||++++..... ....++.+.+.
T Consensus 165 ~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~-------------------------~~~~~~~~~l~ 212 (258)
T 2pwy_A 165 AAYDGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPNI-------------------------TQVLELVRAAE 212 (258)
T ss_dssp TCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESCH-------------------------HHHHHHHHHHT
T ss_pred CCcCEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCH-------------------------HHHHHHHHHHH
Confidence 789999983 33 24688999999999999999965321 01345556666
Q ss_pred cCCceEEEEeee
Q 038410 761 SSSRLCVEHLEN 772 (850)
Q Consensus 761 ~~~gf~v~~~~~ 772 (850)
+ .||......+
T Consensus 213 ~-~gf~~~~~~~ 223 (258)
T 2pwy_A 213 A-HPFRLERVLE 223 (258)
T ss_dssp T-TTEEEEEEEE
T ss_pred H-CCCceEEEEE
Confidence 5 6998766544
No 213
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.45 E-value=8.9e-14 Score=134.41 Aligned_cols=105 Identities=17% Similarity=0.246 Sum_probs=88.2
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C----CCCCccEEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P----EVKKYDTIIS 688 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~----~~~~fD~v~s 688 (850)
+++.+|||+|||+|.++..++++ +.+|+|+|+|+++++.|+++++..++ +++++++|+.+. + ..++||+|++
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 37889999999999999999997 77899999999999999999998887 899999998774 2 1348999999
Q ss_pred ecchhhhChhhHHHHHHHHH--hccccCeEEEEEEecCC
Q 038410 689 CEMIENVGHEYIEEFFGCCE--SLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~--r~LkpgG~~~~~~~~~~ 725 (850)
..+++ + .....++.+. ++|||||.+++......
T Consensus 117 ~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 117 APPYA--M--DLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 98775 2 2356666666 99999999999776543
No 214
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.45 E-value=1e-13 Score=140.64 Aligned_cols=107 Identities=21% Similarity=0.189 Sum_probs=92.1
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---C-C---CCcc
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---E-V---KKYD 684 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~-~---~~fD 684 (850)
.++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..++.++++++++|+.+.. . . ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999997 3 78999999999999999999999999888999999986542 1 1 7899
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+|++... ..++..+++++.++|||||++++.++...
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 9997653 24568899999999999999999776543
No 215
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.45 E-value=3.5e-14 Score=145.22 Aligned_cols=118 Identities=17% Similarity=0.159 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~ 678 (850)
.+.+..++.. .++.+|||||||+|..+..+|+. .+++|++||+|+++++.|+++++..|+.++|+++++|+.+..
T Consensus 49 ~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 49 AQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL 125 (242)
T ss_dssp HHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3444444443 45679999999999999999996 378999999999999999999999999889999999987653
Q ss_pred -C------CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 679 -E------VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 679 -~------~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
. .++||+|++... ..++..+++++.++|||||.+++.++....
T Consensus 126 ~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 126 HSLLNEGGEHQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp HHHHHHHCSSCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred HHHhhccCCCCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 1 479999998764 245688999999999999999998776543
No 216
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.45 E-value=2.1e-13 Score=148.33 Aligned_cols=149 Identities=9% Similarity=0.051 Sum_probs=113.3
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEec
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCE 690 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~ 690 (850)
.++++.+|||||||+|.++..++++ ++.+++++|+ +++++.|++. + +++++.+|+.+ +.+ .||+|++..
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~-~v~~~~~d~~~-~~p-~~D~v~~~~ 254 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------N-NLTYVGGDMFT-SIP-NADAVLLKY 254 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------T-TEEEEECCTTT-CCC-CCSEEEEES
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------C-CcEEEeccccC-CCC-CccEEEeeh
Confidence 4567789999999999999999988 6889999999 9999888752 2 69999999876 411 399999999
Q ss_pred chhhhChhhHHHHHHHHHhcccc---CeEEEEEEecCCCCcCC----CCcCccccccccccCCCCCCCHHHHHHHHhcCC
Q 038410 691 MIENVGHEYIEEFFGCCESLLAE---HGLLLLQFSSVPDQCYD----GHRLSPGFITEYVFPGGCLPSLNRITSAMTSSS 763 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~Lkp---gG~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 763 (850)
+++|++++....++++++++||| ||++++.+...++.... ......++.. ..+. +...+..++.+.+.+ +
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~-g~~~t~~e~~~ll~~-a 331 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNM-ACLN-GKERNEEEWKKLFIE-A 331 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHG-GGGT-CCCEEHHHHHHHHHH-T
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHH-Hhcc-CCCCCHHHHHHHHHH-C
Confidence 99999887666999999999999 99999998876543211 0000011111 1122 556788899887775 7
Q ss_pred ceEEEEeeec
Q 038410 764 RLCVEHLENI 773 (850)
Q Consensus 764 gf~v~~~~~~ 773 (850)
||+++++...
T Consensus 332 Gf~~~~~~~~ 341 (352)
T 1fp2_A 332 GFQHYKISPL 341 (352)
T ss_dssp TCCEEEEEEE
T ss_pred CCCeeEEEec
Confidence 9998877653
No 217
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.45 E-value=3.6e-13 Score=143.37 Aligned_cols=118 Identities=13% Similarity=0.119 Sum_probs=96.8
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKK 682 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~ 682 (850)
.+...+.++++.+|||+|||+|..+..+++. .+.+|+|+|+|+.+++.+++++++.|+. +++++++|+.+++ .+++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccccccc
Confidence 4556678899999999999999999999987 2479999999999999999999999986 7999999998876 4578
Q ss_pred ccEEEEec------chhhhCh--------------hhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 683 YDTIISCE------MIENVGH--------------EYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 683 fD~v~s~~------~~~~~~~--------------~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
||+|++.. ++.+.++ +....+++++.++|||||++++.+.+.
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 99999852 3333221 112589999999999999999977654
No 218
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.44 E-value=2.9e-13 Score=141.67 Aligned_cols=117 Identities=16% Similarity=0.192 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
.++.+++.+...++.+|||||||+|.++..+++.++++|+|+|+|+++++.|+++++..++.++++++++|+.+..+ ++
T Consensus 111 lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~ 189 (284)
T 1nv8_A 111 LVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EK 189 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GG
T ss_pred HHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cc
Confidence 34455555544567899999999999999999876789999999999999999999999998789999999887432 57
Q ss_pred c---cEEEEecchh-----------hhCh------hhHHHHHHHHH-hccccCeEEEEE
Q 038410 683 Y---DTIISCEMIE-----------NVGH------EYIEEFFGCCE-SLLAEHGLLLLQ 720 (850)
Q Consensus 683 f---D~v~s~~~~~-----------~~~~------~~~~~~~~~~~-r~LkpgG~~~~~ 720 (850)
| |+|+|+..+. |-+. .+...+++++. +.|||||.+++.
T Consensus 190 f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 190 FASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 9 9999983221 2221 11237899999 999999999983
No 219
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=2.2e-13 Score=146.44 Aligned_cols=107 Identities=22% Similarity=0.284 Sum_probs=91.3
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEM 691 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~ 691 (850)
+.+|++|||||||+|.++..+|+. |+ +|+|||.|+ +++.|++.++.+|+.++|+++++|++++..+++||+|+|..+
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~ 158 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWM 158 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred hcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecc
Confidence 347889999999999999999987 64 899999995 899999999999999999999999999985579999999654
Q ss_pred hhhh-ChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 692 IENV-GHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 692 ~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
-..+ .+..++.++....|+|||||.++-..
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred cccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 3333 22358899999999999999988543
No 220
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.44 E-value=3.8e-13 Score=136.77 Aligned_cols=169 Identities=10% Similarity=-0.013 Sum_probs=118.3
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCCeEEEEccCc--cHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEE
Q 038410 595 DLDVAQMRKVSLLIEKARVN-KGLDVLEIGCGW--GTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRL 669 (850)
Q Consensus 595 ~l~~aq~~~~~~~~~~l~~~-~~~~vLDiGcG~--G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~ 669 (850)
++..+.+..+.+.++.+... ...+|||||||. +.++..++++ ++++|++||.|+.|++.|++++...+ ..++++
T Consensus 57 ~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~ 135 (277)
T 3giw_A 57 VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAY 135 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEE
T ss_pred HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEE
Confidence 34556677778888777533 346899999997 4455555554 78999999999999999999886543 247999
Q ss_pred EEcccCCCC-----C--CCCcc-----EEEEecchhhhChhh-HHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCcc
Q 038410 670 YLCDYRQMP-----E--VKKYD-----TIISCEMIENVGHEY-IEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSP 736 (850)
Q Consensus 670 ~~~D~~~~~-----~--~~~fD-----~v~s~~~~~~~~~~~-~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~ 736 (850)
+++|+++.. + .+.|| .|+++.++||+++.. +..+++++.+.|+|||++++.+.+..... .......
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~ 214 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVA 214 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHH
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHH
Confidence 999998852 1 24566 699999999998754 68999999999999999999887754211 0000000
Q ss_pred ccccccccCCCCCCCHHHHHHHHhcCCceEEEE
Q 038410 737 GFITEYVFPGGCLPSLNRITSAMTSSSRLCVEH 769 (850)
Q Consensus 737 ~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 769 (850)
+..+..--| ..+.+.+++...+ .||++++
T Consensus 215 ~~~~~~g~p-~~~rs~~ei~~~f---~Glelve 243 (277)
T 3giw_A 215 REYAARNMP-MRLRTHAEAEEFF---EGLELVE 243 (277)
T ss_dssp HHHHHTTCC-CCCCCHHHHHHTT---TTSEECT
T ss_pred HHHHhcCCC-CccCCHHHHHHHh---CCCcccC
Confidence 111111112 2456788886655 3898654
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=8.7e-13 Score=133.86 Aligned_cols=111 Identities=23% Similarity=0.268 Sum_probs=93.9
Q ss_pred HHHHHHcC--CCCCCeEEEEccCccHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEEcccCC
Q 038410 605 SLLIEKAR--VNKGLDVLEIGCGWGTLAIEIVKQTG--CKYTGITLSEEQLKYTETKVKEAGL----QDHIRLYLCDYRQ 676 (850)
Q Consensus 605 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~gl----~~~v~~~~~D~~~ 676 (850)
..+++.+. ++++.+|||||||+|.++..+++..+ .+|+++|+|+++++.+++++...++ .++++++++|..+
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 35566664 78899999999999999999998743 6999999999999999999988764 4589999999887
Q ss_pred CC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 677 MP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 677 ~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
.. ..++||+|++...++++. +++.++|||||++++...+
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 65 457899999999888773 4788999999999997654
No 222
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.43 E-value=6e-13 Score=137.09 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=92.8
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecch
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMI 692 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~ 692 (850)
+++|++|||+|||+|.+++.+|++..++|+++|+|+.+++.++++++.+++.++++++++|++++...+.||.|++....
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCC
Confidence 47899999999999999999999845799999999999999999999999999999999999999877899999987542
Q ss_pred hhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 693 ENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 693 ~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
. -..++..+.++|||||.+.++.+..
T Consensus 203 ~------~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 203 R------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp S------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c------HHHHHHHHHHHcCCCCEEEEEeeec
Confidence 2 1356777889999999998877653
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.43 E-value=7.3e-13 Score=138.30 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=97.1
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC----
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE---- 679 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~---- 679 (850)
.+...+.+++|++|||+|||+|+.+..+++. .+ .+|+++|+|+.+++.++++++..|+. +++++++|+.+++.
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLK 152 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhh
Confidence 3445567889999999999999999999986 45 79999999999999999999999987 89999999887652
Q ss_pred -CCCccEEEEecchhhhC----------------hhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 680 -VKKYDTIISCEMIENVG----------------HEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 680 -~~~fD~v~s~~~~~~~~----------------~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
.++||+|++.......+ .+....+++++.++|||||++++.+.+..
T Consensus 153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 57899999873221111 02357899999999999999999876643
No 224
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.42 E-value=4.5e-13 Score=143.10 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=91.2
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CEEEEEcccCCCCC-----CCCccEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQD-HIRLYLCDYRQMPE-----VKKYDTI 686 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~-~v~~~~~D~~~~~~-----~~~fD~v 686 (850)
..++.+|||+|||+|.+++.+++. +++|++||+|+.+++.|+++++.+++.+ +++++++|+.++.. .++||+|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 457789999999999999999997 7899999999999999999999999876 59999999877541 4689999
Q ss_pred EEecch----------hhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 687 ISCEMI----------ENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 687 ~s~~~~----------~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++.... .+. +++..+++++.++|||||.+++....
T Consensus 230 i~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 995432 223 45789999999999999998876543
No 225
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=5.4e-14 Score=141.48 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=77.3
Q ss_pred HHHHHHHHHHcCC-CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC
Q 038410 601 MRKVSLLIEKARV-NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~ 678 (850)
...++.+++.+.. .++.+|||+|||+|.++..+++. ++++|+|+|+|+++++.|++++...++ +++++++|+.+..
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 92 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWL 92 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhh
Confidence 3456677777765 78899999999999999999998 577999999999999999999988877 7999999987732
Q ss_pred CC-----CCccEEEEecchhhhC------hh------------------hHHHHHHHHHhccccCeEEEEEE
Q 038410 679 EV-----KKYDTIISCEMIENVG------HE------------------YIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 679 ~~-----~~fD~v~s~~~~~~~~------~~------------------~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
++ ++||+|+++..+.+.+ .. .+..+++++.++|||||++++..
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 33 7999999975543321 11 12788999999999999944433
No 226
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=9.9e-13 Score=137.87 Aligned_cols=111 Identities=18% Similarity=0.232 Sum_probs=97.1
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++..++.++++++++|+.+..++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 46788888999999999999999999999987 3689999999999999999999998887789999999887654568
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
||+|++. .+ ++..+++++.++|||||++++...
T Consensus 182 ~D~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 182 VDALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9999984 33 346889999999999999999653
No 227
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=2.9e-13 Score=135.69 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=90.3
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C-CCCCccEEEEe
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P-EVKKYDTIISC 689 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~-~~~~fD~v~s~ 689 (850)
.++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..++.++++++++|..+. + .++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35679999999999999999987 3 7899999999999999999999999887899999998664 3 346 9999987
Q ss_pred cchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 690 EMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
.. ..++..+++++.++|||||++++.+...
T Consensus 134 ~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 134 CD-----VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TT-----TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred CC-----hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 43 2356899999999999999999976543
No 228
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.42 E-value=2.4e-13 Score=139.54 Aligned_cols=116 Identities=15% Similarity=0.126 Sum_probs=96.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM- 677 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~- 677 (850)
.+.+..++.. .++.+|||||||+|..+..+++. + +++|+++|+|+++++.|++++++.|+.++|+++++|+.+.
T Consensus 68 ~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 68 GQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL 144 (247)
T ss_dssp HHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence 3344444443 45679999999999999999997 4 7899999999999999999999999988999999998764
Q ss_pred C-C------CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 678 P-E------VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 678 ~-~------~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+ . .++||+|++... ..++..+++++.++|||||.+++.++..
T Consensus 145 ~~l~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 145 DEMIKDEKNHGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp HHHHHSGGGTTCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred HHHHhccCCCCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 2 1 478999998754 2357899999999999999999976543
No 229
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=6.6e-13 Score=135.42 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=89.3
Q ss_pred HHHcCCCCCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC---C-CCC
Q 038410 608 IEKARVNKGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM---P-EVK 681 (850)
Q Consensus 608 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~---~-~~~ 681 (850)
++.+.++++.+|||||||+|.++..+++.. +.+|+|+|+|+++++.+.++++.. .+++++++|+.+. + .++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 445678899999999999999999999983 589999999999999888888765 4899999999873 3 457
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|++... ..+....+++++.++|||||++++...
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 8999999654 223346678999999999999999543
No 230
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.41 E-value=5.5e-13 Score=134.22 Aligned_cols=115 Identities=23% Similarity=0.289 Sum_probs=94.3
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEM 691 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~ 691 (850)
..++.+|||||||+|.++..++ .+|+|+|+|+. +++++++|+.+++ ++++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR----NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 4678899999999999988773 68999999987 4578899999887 6689999999999
Q ss_pred hhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCCceEEEEee
Q 038410 692 IENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLE 771 (850)
Q Consensus 692 ~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~ 771 (850)
+++ .++..+++++.++|||||++++.++.. ..++..++.+.+.+ +||+++...
T Consensus 125 l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~-----------------------~~~~~~~~~~~l~~-~Gf~~~~~~ 177 (215)
T 2zfu_A 125 LMG---TNIRDFLEEANRVLKPGGLLKVAEVSS-----------------------RFEDVRTFLRAVTK-LGFKIVSKD 177 (215)
T ss_dssp CCS---SCHHHHHHHHHHHEEEEEEEEEEECGG-----------------------GCSCHHHHHHHHHH-TTEEEEEEE
T ss_pred ccc---cCHHHHHHHHHHhCCCCeEEEEEEcCC-----------------------CCCCHHHHHHHHHH-CCCEEEEEe
Confidence 964 457999999999999999999976431 11367888877776 799998866
Q ss_pred ecC
Q 038410 772 NIG 774 (850)
Q Consensus 772 ~~~ 774 (850)
...
T Consensus 178 ~~~ 180 (215)
T 2zfu_A 178 LTN 180 (215)
T ss_dssp CCS
T ss_pred cCC
Confidence 543
No 231
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.41 E-value=1.7e-12 Score=133.79 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCc
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKY 683 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~f 683 (850)
..+++.++++++.+|||+|||+|.++..+++. +.+|+++|+|+++++.|+++.+..++.+++++...|+.+.. ++++|
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 159 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIF 159 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCB
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcc
Confidence 47778888899999999999999999999998 89999999999999999999999888779999999998876 56789
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
|+|++. .+ ++..+++++.++|||||++++...
T Consensus 160 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 160 HAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp SEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred cEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999983 33 346889999999999999999664
No 232
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=1e-12 Score=138.11 Aligned_cols=113 Identities=18% Similarity=0.276 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHc-C-CCCCEEEEEcccCCCC-
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEA-G-LQDHIRLYLCDYRQMP- 678 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-g-l~~~v~~~~~D~~~~~- 678 (850)
...++..+.++++.+|||||||+|.++..+++. ++.+|+++|+|+++++.|+++++.. | +.++++++++|+.+.+
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 357788888999999999999999999999986 4789999999999999999999887 5 5568999999998876
Q ss_pred CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 679 EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++++||+|++. ++ ++..+++++.++|||||++++...+
T Consensus 168 ~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 168 PDGSVDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CTTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCceeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 56789999983 33 2458899999999999999996653
No 233
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.40 E-value=3.1e-13 Score=138.38 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=91.8
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C---C------
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P---E------ 679 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~---~------ 679 (850)
.+.++.+|||||||+|..+..+++.. +++|+++|+|+++++.|+++++..|+.++++++++|..+. + .
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 34578899999999999999999983 6899999999999999999999999887899999997653 2 1
Q ss_pred -------C-CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 680 -------V-KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 680 -------~-~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+ ++||+|++....+ ++..+++++.++|||||++++.++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 2 7899999985533 45789999999999999999976543
No 234
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.40 E-value=3.9e-13 Score=136.52 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=92.8
Q ss_pred HHHHHHHc--CCCCCCeEEEEccCccHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEE
Q 038410 604 VSLLIEKA--RVNKGLDVLEIGCGWGTLAIEIVKQTG-------CKYTGITLSEEQLKYTETKVKEAGL----QDHIRLY 670 (850)
Q Consensus 604 ~~~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~~-------~~v~gid~s~~~~~~a~~~~~~~gl----~~~v~~~ 670 (850)
...+++.+ .++++.+|||||||+|.++..+++..+ .+|+++|+|+++++.|++++.+.++ .++++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34566666 478899999999999999999998633 5999999999999999999887652 2489999
Q ss_pred EcccCCCC-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 671 LCDYRQMP-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 671 ~~D~~~~~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
++|..+.. ..++||+|++...++|+. +++.++|||||++++...
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred ECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 99988733 337899999999999884 578999999999999654
No 235
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.40 E-value=6e-12 Score=129.89 Aligned_cols=105 Identities=16% Similarity=0.226 Sum_probs=87.3
Q ss_pred CCCeEEEEccCccH----HHHHHHHh-c----CCEEEEEeCCHHHHHHHHHHHHH-----------------------cC
Q 038410 615 KGLDVLEIGCGWGT----LAIEIVKQ-T----GCKYTGITLSEEQLKYTETKVKE-----------------------AG 662 (850)
Q Consensus 615 ~~~~vLDiGcG~G~----~~~~la~~-~----~~~v~gid~s~~~~~~a~~~~~~-----------------------~g 662 (850)
++.+|||+|||+|. +++.+++. + +.+|+|+|+|+++++.|++.+-. .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 67777765 3 46999999999999999986410 00
Q ss_pred -------CCCCEEEEEcccCCCC-C-CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEE
Q 038410 663 -------LQDHIRLYLCDYRQMP-E-VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLL 719 (850)
Q Consensus 663 -------l~~~v~~~~~D~~~~~-~-~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~ 719 (850)
+.++|+|.+.|+.+.+ + .++||+|+|.+++.|+.++...++++++++.|||||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1136999999998854 2 5789999999999999887789999999999999999998
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.40 E-value=2.3e-13 Score=140.56 Aligned_cols=152 Identities=12% Similarity=0.137 Sum_probs=102.3
Q ss_pred HHHHHHHHHcCCC-CCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEE-EEcccCCCC-
Q 038410 602 RKVSLLIEKARVN-KGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRL-YLCDYRQMP- 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~-~~~D~~~~~- 678 (850)
.|+..+++.+.+. ++.+|||||||+|.++..++++...+|+|||+|++|++.+.++- .++.. ...|++.++
T Consensus 71 ~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~ 144 (291)
T 3hp7_A 71 LKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEP 144 (291)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCG
T ss_pred HHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecch
Confidence 3677888888875 57799999999999999999983359999999999999854321 14433 334555544
Q ss_pred ---CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCcccccccc-cc--CCCCCCCH
Q 038410 679 ---EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEY-VF--PGGCLPSL 752 (850)
Q Consensus 679 ---~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~--p~~~~~~~ 752 (850)
+..+||.|++..+|+++ ..++.+++|+|||||++++.. .|. ++..+ ..+.+. +. |..+....
T Consensus 145 ~~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lv--kPq--fe~~~---~~~~~~G~vrd~~~~~~~~ 212 (291)
T 3hp7_A 145 VDFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALV--KPQ--FEAGR---EQIGKNGIVRESSIHEKVL 212 (291)
T ss_dssp GGCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CGG--GTSCG---GGCC-CCCCCCHHHHHHHH
T ss_pred hhCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEE--Ccc--cccCh---hhcCCCCccCCHHHHHHHH
Confidence 23459999998888766 679999999999999999842 221 11111 111110 00 00111245
Q ss_pred HHHHHHHhcCCceEEEEeee
Q 038410 753 NRITSAMTSSSRLCVEHLEN 772 (850)
Q Consensus 753 ~~~~~~~~~~~gf~v~~~~~ 772 (850)
.++.+.+.. +||.+..+..
T Consensus 213 ~~v~~~~~~-~Gf~v~~~~~ 231 (291)
T 3hp7_A 213 ETVTAFAVD-YGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHH-TTEEEEEEEE
T ss_pred HHHHHHHHH-CCCEEEEEEE
Confidence 667666665 7999887765
No 237
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.40 E-value=7.1e-13 Score=134.63 Aligned_cols=111 Identities=17% Similarity=0.307 Sum_probs=93.5
Q ss_pred HHHHHHc--CCCCCCeEEEEccCccHHHHHHHHhcC------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEEc
Q 038410 605 SLLIEKA--RVNKGLDVLEIGCGWGTLAIEIVKQTG------CKYTGITLSEEQLKYTETKVKEAGL----QDHIRLYLC 672 (850)
Q Consensus 605 ~~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~~------~~v~gid~s~~~~~~a~~~~~~~gl----~~~v~~~~~ 672 (850)
..+++.+ .++++.+|||||||+|.++..+++..+ ++|+++|+|+++++.|+++++..++ .++++++++
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 4555555 578899999999999999999998743 5999999999999999999998874 458999999
Q ss_pred ccCCCC-----CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 673 DYRQMP-----EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 673 D~~~~~-----~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
|..+.. ..++||+|++...++++. +++.++|||||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 988753 346899999999988763 6789999999999997654
No 238
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.39 E-value=6.1e-13 Score=144.96 Aligned_cols=156 Identities=10% Similarity=0.085 Sum_probs=117.9
Q ss_pred HHHHHc--CCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCC
Q 038410 606 LLIEKA--RVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKK 682 (850)
Q Consensus 606 ~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~ 682 (850)
.+++.+ .++++.+|||||||+|.++..++++ ++.+++++|+ +.+++.|++ .+ +++++.+|+.+ +.+ +
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~~-~ 251 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NE-NLNFVGGDMFK-SIP-S 251 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CS-SEEEEECCTTT-CCC-C
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CC-CcEEEeCccCC-CCC-C
Confidence 445555 4457789999999999999999998 6789999999 788877764 22 69999999987 522 5
Q ss_pred ccEEEEecchhhhChhhHHHHHHHHHhcccc---CeEEEEEEecCCCCcCC----CCcCccccccccccCCCCCCCHHHH
Q 038410 683 YDTIISCEMIENVGHEYIEEFFGCCESLLAE---HGLLLLQFSSVPDQCYD----GHRLSPGFITEYVFPGGCLPSLNRI 755 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~~~~~~~~~~r~Lkp---gG~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~p~~~~~~~~~~ 755 (850)
||+|++..+++|++++....++++++++||| ||++++.+...++.... ......++.. ...+++...+..++
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~g~~~t~~e~ 330 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVM-LTMFLGKERTKQEW 330 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHH-HHHHSCCCEEHHHH
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHH-hccCCCCCCCHHHH
Confidence 9999999999999887667999999999999 99999988776543211 0000111111 11345677899999
Q ss_pred HHHHhcCCceEEEEeeec
Q 038410 756 TSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 756 ~~~~~~~~gf~v~~~~~~ 773 (850)
.+.+.+ +||+++.+...
T Consensus 331 ~~ll~~-aGf~~~~~~~~ 347 (358)
T 1zg3_A 331 EKLIYD-AGFSSYKITPI 347 (358)
T ss_dssp HHHHHH-TTCCEEEEEEE
T ss_pred HHHHHH-cCCCeeEEEec
Confidence 888876 79998887664
No 239
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=1.5e-12 Score=132.13 Aligned_cols=106 Identities=23% Similarity=0.206 Sum_probs=87.3
Q ss_pred HHHcCCCCCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC----CCCC
Q 038410 608 IEKARVNKGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM----PEVK 681 (850)
Q Consensus 608 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~----~~~~ 681 (850)
++.+.++++.+|||+|||+|.++..+++.. +.+|+|+|+|+++++.++++++.. ++++++++|+.+. +..+
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccC
Confidence 444557899999999999999999999873 479999999999999999988654 4899999999873 2346
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
+||+|++... .......+++++.++|||||++++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999998754 1122445699999999999999997
No 240
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.38 E-value=7.3e-13 Score=135.15 Aligned_cols=116 Identities=14% Similarity=0.099 Sum_probs=95.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM- 677 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~- 677 (850)
.+.+..++.. .++.+|||||||+|..+..+++. + +++|+++|+|+++++.|++++++.|+.++++++++|+.+.
T Consensus 59 ~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 59 GQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL 135 (237)
T ss_dssp HHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3344444443 46679999999999999999997 4 7899999999999999999999999988899999998654
Q ss_pred C-C------CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 678 P-E------VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 678 ~-~------~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+ . .++||+|++... ..++..+++.+.++|||||.+++.++..
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred HHHHhccCCCCCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 2 1 478999998643 2457899999999999999999976543
No 241
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.38 E-value=2.3e-12 Score=139.99 Aligned_cols=118 Identities=24% Similarity=0.272 Sum_probs=100.0
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
...++..++.+++.+|||+|||+|.+++.++... +.+|+|+|+|+++++.|+++++.+|++ ++++.++|+.+++ +.
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 3467777888999999999999999999999973 489999999999999999999999998 8999999999987 55
Q ss_pred CCccEEEEecchhhh-C-----hhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 681 KKYDTIISCEMIENV-G-----HEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~-~-----~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+.||+|+++..+... + .+.+..+++++.++|||||++++.+.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 679999997654321 1 12357899999999999999999543
No 242
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.3e-12 Score=135.97 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEec
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCE 690 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~ 690 (850)
.++++++|||+|||+|.++..+|+. .+++|+|+|+|+++++.|+++++.+++. +++++++|+.+.+..++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECC
Confidence 4678999999999999999999998 4569999999999999999999999986 6899999998874346899999986
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
.. ....++.++.++|||||.+++++...
T Consensus 195 p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 54 34678999999999999999987764
No 243
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.37 E-value=2.3e-12 Score=132.45 Aligned_cols=107 Identities=19% Similarity=0.371 Sum_probs=85.8
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCEEEEEcccCC-CC---C
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA--------GLQDHIRLYLCDYRQ-MP---E 679 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--------gl~~~v~~~~~D~~~-~~---~ 679 (850)
++++.+|||||||+|.++..+++. ++++|+|||+|+.+++.|+++++.. ++. +++++++|+.+ ++ +
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhcc
Confidence 457889999999999999999998 5679999999999999999998876 664 89999999887 43 3
Q ss_pred CCCccEEEEecchhhhChh------hHHHHHHHHHhccccCeEEEEE
Q 038410 680 VKKYDTIISCEMIENVGHE------YIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~------~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
.++||.|+....-.+...+ ....+++++.++|||||.+++.
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 5789999865322221000 0158999999999999999984
No 244
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=7.3e-13 Score=134.80 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=91.4
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC-C----CC--CCcc
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM-P----EV--KKYD 684 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~-~----~~--~~fD 684 (850)
.++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..|+.++++++++|+.+. + .+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46779999999999999999987 3 6899999999999999999999999988899999997543 1 12 6899
Q ss_pred EEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+|++... ..++..+++++.++|||||++++.++...
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 9998754 24578999999999999999999776543
No 245
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.36 E-value=2.9e-13 Score=152.69 Aligned_cols=56 Identities=14% Similarity=0.109 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEe---------------cCCce-EEEeeCCcEE--eCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFP---------------ADEGC-SIVCVNGSQE--FYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~---------------~~~~v-~V~~~~G~~i--~ad~VV~A~p~~~ 268 (850)
..+++.|.+.+++.|++|+.+++|++|+. +++++ .|++.+| ++ .||.||+|++++.
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 47899999999999999999999999998 56664 6888888 58 9999999999875
No 246
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=1.2e-12 Score=133.13 Aligned_cols=107 Identities=14% Similarity=0.146 Sum_probs=91.6
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---C-C---CCc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---E-V---KKY 683 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~-~---~~f 683 (850)
..++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..|+.++++++++|+.+.. . . ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 356789999999999999999987 3 68999999999999999999999999889999999986542 1 1 689
Q ss_pred cEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 684 DTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 684 D~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
|+|++... ..++..+++++.++|||||.+++.++..
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 99999654 2456889999999999999999976543
No 247
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.35 E-value=3.8e-12 Score=126.51 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=84.3
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh-c--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ-T--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP 678 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~ 678 (850)
|+..+.++.. ++++.+|||||||+|.++..++++ + +++|+|+|+|+.+ .. .+++++++|+.+.+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDN 76 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTS
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchh
Confidence 4455666665 588999999999999999999988 3 5899999999831 12 37899999998764
Q ss_pred --------------------------CCCCccEEEEecchhhhChh--hH-------HHHHHHHHhccccCeEEEEEEe
Q 038410 679 --------------------------EVKKYDTIISCEMIENVGHE--YI-------EEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 679 --------------------------~~~~fD~v~s~~~~~~~~~~--~~-------~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
++++||+|++..++++.+.. +. ..+++++.++|||||.+++..+
T Consensus 77 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 77 MNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp SCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 34689999999877764321 11 2478999999999999998654
No 248
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=6.9e-13 Score=135.03 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=81.5
Q ss_pred CCCeEEEEccCccHHHHHHHHh-----cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC---C--CCCCcc
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQ-----TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM---P--EVKKYD 684 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~-----~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~---~--~~~~fD 684 (850)
++.+|||||||+|..+..+++. ++++|+|||+|+++++.|+ ++.++|+++++|+.+. + ...+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCC
Confidence 5679999999999999999986 4789999999999999887 2335899999999885 4 234799
Q ss_pred EEEEecchhhhChhhHHHHHHHHHh-ccccCeEEEEEEe
Q 038410 685 TIISCEMIENVGHEYIEEFFGCCES-LLAEHGLLLLQFS 722 (850)
Q Consensus 685 ~v~s~~~~~~~~~~~~~~~~~~~~r-~LkpgG~~~~~~~ 722 (850)
+|++... |. ++..+++++.+ +|||||++++.++
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998765 42 46889999997 9999999999654
No 249
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.34 E-value=4.2e-12 Score=136.99 Aligned_cols=113 Identities=14% Similarity=0.229 Sum_probs=91.1
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHcC----------CCCCEEEEE
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG--CKYTGITLSEEQLKYTETKVKEAG----------LQDHIRLYL 671 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~g----------l~~~v~~~~ 671 (850)
...++..+.+.++.+|||||||+|.++..+++..+ .+|+|+|+|+++++.|+++++..+ +.+++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 35677778899999999999999999999998733 899999999999999999988643 345899999
Q ss_pred cccCCCC---CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 672 CDYRQMP---EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 672 ~D~~~~~---~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+|+.+.. ++++||+|++... . +..+++++.++|||||++++....
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-----~--~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-----N--PHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-----S--TTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCC-----C--HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998863 4568999998532 1 234899999999999999986543
No 250
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=2.1e-12 Score=136.75 Aligned_cols=109 Identities=17% Similarity=0.135 Sum_probs=85.1
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH---cCCCCCEEEEEcccCCCC---CCCCccE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE---AGLQDHIRLYLCDYRQMP---EVKKYDT 685 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~---~gl~~~v~~~~~D~~~~~---~~~~fD~ 685 (850)
.+++.+|||||||+|.++..+++. +..+|++||+|+++++.|++++.. .....+++++.+|+.+.. .+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999987 457999999999999999998742 122358999999987654 3578999
Q ss_pred EEEecchhhhChhhH--HHHHHHHHhccccCeEEEEEE
Q 038410 686 IISCEMIENVGHEYI--EEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 686 v~s~~~~~~~~~~~~--~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|++.....+.+...+ ..++++++++|||||+++++.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999876654332222 689999999999999999974
No 251
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.33 E-value=3.6e-12 Score=133.11 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=83.8
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecc
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEM 691 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~ 691 (850)
+++.+|||||||+|.++..+++. ++++|+|+|+|+++++.|+++. .++++...|+.+++ ++++||+|+++.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 67889999999999999999998 5889999999999999998874 26899999999888 6689999999765
Q ss_pred hhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 692 IENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 692 ~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
. .+++++.++|||||++++.+...
T Consensus 158 ~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 P---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred h---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 2 35789999999999999977654
No 252
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=2.7e-12 Score=134.53 Aligned_cols=109 Identities=18% Similarity=0.246 Sum_probs=84.1
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcC---C-CCCEEEEEcccCCCC--CCCCccEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAG---L-QDHIRLYLCDYRQMP--EVKKYDTI 686 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~g---l-~~~v~~~~~D~~~~~--~~~~fD~v 686 (850)
.++.+|||||||+|.++..+++. +..+|++||+|+++++.|++++...+ + ..+++++.+|..+.. .+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45679999999999999999998 45799999999999999999887542 2 348999999987754 45789999
Q ss_pred EEecchhhhChhhH--HHHHHHHHhccccCeEEEEEEe
Q 038410 687 ISCEMIENVGHEYI--EEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 687 ~s~~~~~~~~~~~~--~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
++...-...+...+ ..+++.+.++|||||+++++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99654332222222 7899999999999999999764
No 253
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.32 E-value=2.6e-11 Score=121.04 Aligned_cols=104 Identities=12% Similarity=0.099 Sum_probs=87.4
Q ss_pred HHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEE
Q 038410 609 EKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIIS 688 (850)
Q Consensus 609 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s 688 (850)
......++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++..++ +++++++|+.+++ ++||+|++
T Consensus 43 ~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~ 118 (207)
T 1wy7_A 43 YSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIM 118 (207)
T ss_dssp HHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEE
T ss_pred HHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEE
Confidence 3345668899999999999999999987334899999999999999999988887 7999999999986 58999999
Q ss_pred ecchhhhChhhHHHHHHHHHhccccCeEEE
Q 038410 689 CEMIENVGHEYIEEFFGCCESLLAEHGLLL 718 (850)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~ 718 (850)
+..+++........+++++.++| |+.++
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 99887775444568899999998 55433
No 254
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.32 E-value=5.9e-12 Score=131.90 Aligned_cols=115 Identities=14% Similarity=0.185 Sum_probs=91.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
...++.+++.+.+.++++|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++.++++++++|+.+++.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~- 91 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL- 91 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-
Confidence 345678889999999999999999999999999998 889999999999999999998777765689999999988763
Q ss_pred CCccEEEEecchhhhChhhHHHHH--------------HHH--HhccccCeEEE
Q 038410 681 KKYDTIISCEMIENVGHEYIEEFF--------------GCC--ESLLAEHGLLL 718 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~~~~~--------------~~~--~r~LkpgG~~~ 718 (850)
.+||.|+++..++...+ -...++ +++ +++|||||.++
T Consensus 92 ~~fD~vv~nlpy~~~~~-~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 PFFDTCVANLPYQISSP-FVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCCSEEEEECCGGGHHH-HHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhhcEEEEecCcccchH-HHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 27999999865544321 112222 233 36899999874
No 255
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.31 E-value=1.9e-12 Score=137.54 Aligned_cols=107 Identities=19% Similarity=0.228 Sum_probs=86.4
Q ss_pred HHHHHHHHcCCCCCCeEEEEccC------ccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEccc
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCG------WGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDY 674 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG------~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~ 674 (850)
.++.+++.+. .++.+||||||| +|+.+..++++ ++++|+|||+|++|.. ..++++++++|+
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa 273 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecc
Confidence 3456676665 356899999999 78888888776 6899999999999721 234899999999
Q ss_pred CCCC-C------CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 675 RQMP-E------VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 675 ~~~~-~------~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
.+++ . +++||+|++... +++ .++..+|++++++|||||++++.++.
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9876 3 589999999754 555 45789999999999999999998775
No 256
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.31 E-value=2.5e-12 Score=124.82 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=113.1
Q ss_pred HHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC----CCCCcc
Q 038410 609 EKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP----EVKKYD 684 (850)
Q Consensus 609 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~----~~~~fD 684 (850)
..+++++|++|||||||. +++|+|++|++.|+++.. .+++++++|+.+++ ++++||
T Consensus 6 ~~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 6 ADFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred hccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEe
Confidence 345789999999999996 239999999999998853 25899999998875 367899
Q ss_pred EEEEecchhhh-ChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccccccCCCCCCCHHHHHHHHhcCC
Q 038410 685 TIISCEMIENV-GHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSS 763 (850)
Q Consensus 685 ~v~s~~~~~~~-~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 763 (850)
+|++..+++|+ .+ +..++++++|+|||||++++........ . . .....+..++.+.+.+ +
T Consensus 66 ~V~~~~~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~-----~-~----------~~~~~~~~~~~~~l~~-a 126 (176)
T 2ld4_A 66 IILSGLVPGSTTLH--SAEILAEIARILRPGGCLFLKEPVETAV-----D-N----------NSKVKTASKLCSALTL-S 126 (176)
T ss_dssp EEEECCSTTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEESSS-----C-S----------SSSSCCHHHHHHHHHH-T
T ss_pred EEEECChhhhcccC--HHHHHHHHHHHCCCCEEEEEEccccccc-----c-c----------ccccCCHHHHHHHHHH-C
Confidence 99999999999 54 5899999999999999999954432110 0 0 1123467888888876 7
Q ss_pred ceEEEEeeecCCcHHHHHHHHHHHHHhcHHHHHhccCCHHHHHHHHHHHHHHHHHhccCcceEEEEEEEecC
Q 038410 764 RLCVEHLENIGIHFYQTLRCWRTNLMEKQSEILALGFNEKFIRTWEYYFDYCAAGFKSRTLGNYQIVFSRPS 835 (850)
Q Consensus 764 gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~q~~~~~~~ 835 (850)
|| +. +..... ..++....+.|.. ..++....+....++++||.
T Consensus 127 Gf-i~-~~~~~~----------------------~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~a~Kp~ 169 (176)
T 2ld4_A 127 GL-VE-VKELQR----------------------EPLTPEEVQSVRE-----HLGHESDNLLFVQITGKKPN 169 (176)
T ss_dssp TC-EE-EEEEEE----------------------ECCCHHHHHHHHH-----HTCCCCSSEEEEEEEEECCC
T ss_pred CC-cE-eecCcc----------------------cCCCHHHHHHHHH-----HhcccCCceEEEEEeccCCc
Confidence 99 55 443321 0122222333331 23455556778999999985
No 257
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.31 E-value=1.5e-11 Score=137.53 Aligned_cols=119 Identities=16% Similarity=0.184 Sum_probs=98.4
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EV 680 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~ 680 (850)
.+...+++++|++|||+|||.|+.+..+++. .+ .+|+++|+|+.+++.+++++++.|+. +++++++|+.+++ ++
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhcc
Confidence 4556678899999999999999999999997 34 79999999999999999999999986 7999999998876 22
Q ss_pred CCccEEEE------ecchhhhChhh--------------HHHHHHHHHhccccCeEEEEEEecCC
Q 038410 681 KKYDTIIS------CEMIENVGHEY--------------IEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 681 ~~fD~v~s------~~~~~~~~~~~--------------~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
++||+|++ .+++.+.++.. ...+++++.++|||||++++.+.+..
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 68999997 34444443311 16789999999999999999887643
No 258
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.31 E-value=2.2e-13 Score=137.85 Aligned_cols=152 Identities=13% Similarity=0.181 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCC-CCCeEEEEccCccHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEE-EcccCCCC
Q 038410 602 RKVSLLIEKARVN-KGLDVLEIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLY-LCDYRQMP 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~-~~D~~~~~ 678 (850)
.|++.+++.+.+. ++.+|||||||+|.++..++++ + .+|+|||+|++|++.|+++.. ++... ..+++.+.
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~ 95 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAV 95 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeC
Confidence 3567778887765 4679999999999999999998 6 499999999999999876532 22221 11222211
Q ss_pred ----CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecCCCCcCCCCcCccccccc-ccc--CCCCCCC
Q 038410 679 ----EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDGHRLSPGFITE-YVF--PGGCLPS 751 (850)
Q Consensus 679 ----~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~--p~~~~~~ 751 (850)
+...||.+.+..++.++ ..++++++++|||||++++.. .+. +.... ..+.+ -++ |..+..+
T Consensus 96 ~~~~~~~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~--~e~~~---~~~~~~G~~~d~~~~~~~ 163 (232)
T 3opn_A 96 LADFEQGRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KPQ--FEAGR---EQVGKNGIIRDPKVHQMT 163 (232)
T ss_dssp GGGCCSCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHH--HHSCH---HHHC-CCCCCCHHHHHHH
T ss_pred HhHcCcCCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--Ccc--cccCH---HHhCcCCeecCcchhHHH
Confidence 11135666555555554 679999999999999999843 111 11100 00000 000 0011225
Q ss_pred HHHHHHHHhcCCceEEEEeeec
Q 038410 752 LNRITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 752 ~~~~~~~~~~~~gf~v~~~~~~ 773 (850)
..++.+.+.+ +||++..++..
T Consensus 164 ~~~l~~~l~~-aGf~v~~~~~~ 184 (232)
T 3opn_A 164 IEKVLKTATQ-LGFSVKGLTFS 184 (232)
T ss_dssp HHHHHHHHHH-HTEEEEEEEEC
T ss_pred HHHHHHHHHH-CCCEEEEEEEc
Confidence 6677777775 69999887643
No 259
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.30 E-value=1.9e-11 Score=133.29 Aligned_cols=153 Identities=21% Similarity=0.205 Sum_probs=112.1
Q ss_pred HHhhhhccCCChHHHHHhcCCC---cceeecccC-CCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHH
Q 038410 560 RRNISHHYDVSNELFSLFLGKS---MMYSCAIFK-SEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVK 635 (850)
Q Consensus 560 ~~~i~~~Yd~~~~~~~~~l~~~---~~ys~~~~~-~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~ 635 (850)
..++.-|+++.++.+..++|.+ ..+..+|-. ....++.+.. ...++..+ .+++.+|||+|||+|.+++.+++
T Consensus 162 ~p~~~i~~~~~~d~~~~~ld~~g~~~l~~rgyr~~~~~a~l~~~l---a~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~ 237 (373)
T 3tm4_A 162 HPAVIFRAELIKDVFFLGIDTTGDSSLHKRPWRVYDHPAHLKASI---ANAMIELA-ELDGGSVLDPMCGSGTILIELAL 237 (373)
T ss_dssp SCSEEEEEEEETTEEEEEEESSCSSCTTCCTTCCSCCTTCCCHHH---HHHHHHHH-TCCSCCEEETTCTTCHHHHHHHH
T ss_pred CCCeEEEEEEECCEEEEEEEccCCcccccCCcccccCCCCccHHH---HHHHHHhh-cCCCCEEEEccCcCcHHHHHHHH
Confidence 3456667888888888888753 223334321 1223333332 23444555 78899999999999999999999
Q ss_pred hcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecchhhhC------hhhHHHHHHH
Q 038410 636 QTGC--KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEMIENVG------HEYIEEFFGC 706 (850)
Q Consensus 636 ~~~~--~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~~~~~~------~~~~~~~~~~ 706 (850)
. +. +|+|+|+|+++++.|+++++.+|+.+++++.++|+.+++ ++++||+|+++..+...- .+-+..++++
T Consensus 238 ~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~ 316 (373)
T 3tm4_A 238 R-RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNE 316 (373)
T ss_dssp T-TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHH
T ss_pred h-CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHH
Confidence 8 44 999999999999999999999999889999999999988 568999999986643211 1224788999
Q ss_pred HHhccccCeEEEE
Q 038410 707 CESLLAEHGLLLL 719 (850)
Q Consensus 707 ~~r~LkpgG~~~~ 719 (850)
+.++| +|.+++
T Consensus 317 l~r~l--~g~~~~ 327 (373)
T 3tm4_A 317 LAKVL--EKRGVF 327 (373)
T ss_dssp HHHHE--EEEEEE
T ss_pred HHHHc--CCeEEE
Confidence 99999 444444
No 260
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.30 E-value=5e-12 Score=122.76 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=88.4
Q ss_pred HHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-
Q 038410 603 KVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP- 678 (850)
Q Consensus 603 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~- 678 (850)
++..+++.+. ++++.+|||+|||+|.++..+++. ++++|+|+|+|+ +++. .++++.++|+.+.+
T Consensus 9 ~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~ 76 (180)
T 1ej0_A 9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELV 76 (180)
T ss_dssp HHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchh
Confidence 3456666665 688999999999999999999988 358999999999 6532 37999999998763
Q ss_pred --------CCCCccEEEEecchhhhChhh---------HHHHHHHHHhccccCeEEEEEEec
Q 038410 679 --------EVKKYDTIISCEMIENVGHEY---------IEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 679 --------~~~~fD~v~s~~~~~~~~~~~---------~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++++||+|++..++++.+... ...+++++.++|||||.+++....
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 347899999998888775431 168899999999999999986654
No 261
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=3.8e-12 Score=126.17 Aligned_cols=105 Identities=8% Similarity=0.103 Sum_probs=92.7
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecch
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMI 692 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~ 692 (850)
.+..+|||||||||-++..++.. +.++|+++|+++.+++.+++++..+|+ +.++.+.|+..-++.++||+|++.-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCCcchHHHHHHH
Confidence 34669999999999999999888 788999999999999999999999998 478999998877777899999999999
Q ss_pred hhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 693 ENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 693 ~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+|+.++.....+ ++.+.|+|+|.++--.
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 999665555667 8999999999888643
No 262
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.29 E-value=7.7e-12 Score=138.15 Aligned_cols=118 Identities=10% Similarity=0.095 Sum_probs=96.8
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVK 681 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~ 681 (850)
.+...+.+++|++|||+|||+|+.+..+|+. . ..+|+++|+|+++++.+++++++.|+. ++++++|+.+++ ..+
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCS
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccc
Confidence 4455677889999999999999999999987 2 379999999999999999999999985 999999988765 357
Q ss_pred CccEEEEe------cchhhhChh--------------hHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 682 KYDTIISC------EMIENVGHE--------------YIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 682 ~fD~v~s~------~~~~~~~~~--------------~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+||+|++. +++.+-++. ....+++++.++|||||+++..+.+..
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 89999963 333332221 127789999999999999999887653
No 263
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=7.3e-12 Score=122.87 Aligned_cols=109 Identities=25% Similarity=0.318 Sum_probs=84.5
Q ss_pred HHHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 602 RKVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 602 ~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
-|+..+.++.. ++++.+|||+|||+|.++..++++ +++|+|||+|+.. .+ .+++++++|+.+.+ .
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHH
Confidence 35667777766 478999999999999999999998 8999999999752 22 37999999998864 1
Q ss_pred -----------CCCccEEEEecchhhhCh---------hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 680 -----------VKKYDTIISCEMIENVGH---------EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 680 -----------~~~fD~v~s~~~~~~~~~---------~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
.++||+|+|.......+. +.....++.+.++|||||.+++..+.
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 148999999754322221 12357889999999999999986654
No 264
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.29 E-value=8.8e-12 Score=137.55 Aligned_cols=120 Identities=13% Similarity=0.139 Sum_probs=97.7
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVK 681 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~ 681 (850)
.+...+.+++|++|||+|||+|+.+..+|+. . ..+|+++|+|+.+++.+++++++.|+. ++.+++.|..++. .++
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccc
Confidence 4556677899999999999999999999987 3 479999999999999999999999996 7999999988765 347
Q ss_pred CccEEEEec------chhhhCh--------------hhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 682 KYDTIISCE------MIENVGH--------------EYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 682 ~fD~v~s~~------~~~~~~~--------------~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
+||+|++.. ++.+-++ +....+++++.++|||||+++.++.+...
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 899999853 3322111 11237899999999999999998877543
No 265
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.28 E-value=8.1e-12 Score=138.18 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=54.5
Q ss_pred EecCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 206 TVRRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 206 ~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
++......+.+.|.+.+++.|++|+++++|++|..+++++.|++.+| ++.||+||+|++...
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 34555568899999999989999999999999999888899999888 799999999998765
No 266
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=8.8e-12 Score=130.24 Aligned_cols=106 Identities=20% Similarity=0.245 Sum_probs=85.0
Q ss_pred CeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CCCCccEEEEecch
Q 038410 617 LDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EVKKYDTIISCEMI 692 (850)
Q Consensus 617 ~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~~~fD~v~s~~~~ 692 (850)
.+|||||||+|.++.+++++ ++++|++||+|+++++.|++++.... .++++++++|..+.. ++++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999995 78899999999999999999875322 358999999987652 35789999986432
Q ss_pred hhhChhh--HHHHHHHHHhccccCeEEEEEEec
Q 038410 693 ENVGHEY--IEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 693 ~~~~~~~--~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
..-.... ...++++++++|||||.++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2111111 268999999999999999998764
No 267
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.27 E-value=9.3e-12 Score=136.15 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=90.2
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCC-CEEEEEcccCCCC-----CCCCccEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQD-HIRLYLCDYRQMP-----EVKKYDTI 686 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~-~v~~~~~D~~~~~-----~~~~fD~v 686 (850)
.++.+|||+|||+|.+++.+|+. ++ +|+|+|+|+++++.|+++++.+++.+ +++++++|+.+.. ...+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 57889999999999999999987 55 89999999999999999999999976 8999999987632 23589999
Q ss_pred EEecchh-----hhC--hhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 687 ISCEMIE-----NVG--HEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 687 ~s~~~~~-----~~~--~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++..... ++. .+.+..+++.+.++|||||.+++.+..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9864331 111 135677889999999999999987643
No 268
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.27 E-value=4.9e-11 Score=144.51 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..++.+|++.+++.|++|+++++|++|+.+++++ .|++.+| +++||+||+|++++.
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 4788999999999999999999999999988876 5888777 699999999999885
No 269
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.27 E-value=1.2e-11 Score=131.78 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=86.7
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCEEEEEcccCCC-C--CCCCccE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA--GL-QDHIRLYLCDYRQM-P--EVKKYDT 685 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--gl-~~~v~~~~~D~~~~-~--~~~~fD~ 685 (850)
.+++.+|||||||+|.+++.++++ +..+|++||+|+++++.|++++... ++ .++++++++|+.+. + ++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 456789999999999999999987 4679999999999999999988652 44 34899999997764 1 3478999
Q ss_pred EEEecchhhhChh--hHHHHHHHHHhccccCeEEEEEE
Q 038410 686 IISCEMIENVGHE--YIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 686 v~s~~~~~~~~~~--~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
|++...-..-+.+ ....+++++.++|||||.++++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9996532111111 14789999999999999999963
No 270
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.27 E-value=1.9e-11 Score=136.72 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=97.0
Q ss_pred HHHHHcCCC--CCCeEEEEccCccHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--C
Q 038410 606 LLIEKARVN--KGLDVLEIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--E 679 (850)
Q Consensus 606 ~~~~~l~~~--~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~ 679 (850)
.+...+.+. +|++|||+|||+|+.+..+|+.. +.+|+++|+|+.+++.+++++++.|+. +++++++|+.+++ .
T Consensus 106 l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~ 184 (479)
T 2frx_A 106 LPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAV 184 (479)
T ss_dssp HHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHS
T ss_pred HHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhc
Confidence 334556666 99999999999999999999973 479999999999999999999999986 7999999998875 4
Q ss_pred CCCccEEEEe------cchhhhCh--------------hhHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 680 VKKYDTIISC------EMIENVGH--------------EYIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 680 ~~~fD~v~s~------~~~~~~~~--------------~~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
+++||+|++. +++.+.++ +....+++++.++|||||++++.+.+..
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 5789999983 33433221 1135789999999999999999887653
No 271
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.26 E-value=1.1e-11 Score=130.60 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=86.3
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCEEEEEcccCCC-C-CCCCccEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE--AGL-QDHIRLYLCDYRQM-P-EVKKYDTI 686 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~gl-~~~v~~~~~D~~~~-~-~~~~fD~v 686 (850)
..++.+|||||||+|.+++.++++ +..+|++||+|+++++.|++++.. .++ .++++++.+|+.+. + .+++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 356689999999999999999988 457999999999999999998765 344 45899999998763 2 35789999
Q ss_pred EEecchhhhCh--hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 687 ISCEMIENVGH--EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 687 ~s~~~~~~~~~--~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++.......+. .....+++++.++|||||.++++...
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99754322111 12367999999999999999997643
No 272
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.26 E-value=2.1e-11 Score=121.03 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEec
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCE 690 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~ 690 (850)
...++.+|||+|||+|.++..+++. +. +|+|+|+|+++++.|++++. +++++++|+.+++ ++||+|+++.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECC
Confidence 5667889999999999999999987 55 79999999999999998864 6899999999886 7899999999
Q ss_pred chhhhChhhHHHHHHHHHhcc
Q 038410 691 MIENVGHEYIEEFFGCCESLL 711 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~L 711 (850)
.++|........+++++.++|
T Consensus 119 p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 119 PFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CC-------CHHHHHHHHHHE
T ss_pred CchhccCchhHHHHHHHHHhc
Confidence 999986543467899999988
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.26 E-value=1.2e-12 Score=135.83 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=85.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCEEEE--EcccCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKV-KEAGLQDHIRLY--LCDYRQMP 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~-~~~gl~~~v~~~--~~D~~~~~ 678 (850)
.|+..+.++..++++.+|||||||+|.++..++++ .+|+|||+|+ ++..++++. .......+++++ ++|+++++
T Consensus 69 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 69 AKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 44566677766789999999999999999999997 6999999998 543332210 001111268999 99999887
Q ss_pred CCCCccEEEEecchhhhChhh---H--HHHHHHHHhccccCe--EEEEEEec
Q 038410 679 EVKKYDTIISCEMIENVGHEY---I--EEFFGCCESLLAEHG--LLLLQFSS 723 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~---~--~~~~~~~~r~LkpgG--~~~~~~~~ 723 (850)
+++||+|+|..+ ++.+... . ..+++++.++||||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 4433211 1 137899999999999 99986554
No 274
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.26 E-value=1.3e-12 Score=134.77 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=85.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCEEEE--EcccCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKV-KEAGLQDHIRLY--LCDYRQMP 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~-~~~gl~~~v~~~--~~D~~~~~ 678 (850)
.|+..+.++..++++++|||||||+|.++..++++ .+|+|||+|+ ++..++++. .......+++++ ++|+.+++
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 44566677766789999999999999999999987 7999999998 533322110 000111268899 99999887
Q ss_pred CCCCccEEEEecchhhhChhh---H--HHHHHHHHhccccCe--EEEEEEec
Q 038410 679 EVKKYDTIISCEMIENVGHEY---I--EEFFGCCESLLAEHG--LLLLQFSS 723 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~---~--~~~~~~~~r~LkpgG--~~~~~~~~ 723 (850)
+++||+|+|..+ ++.+... . ..+++.+.++||||| .+++..+.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 578999999876 4443211 1 137899999999999 99986654
No 275
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=6.4e-11 Score=129.32 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=89.3
Q ss_pred CCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC-CCC--CCCccEEE
Q 038410 612 RVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-MPE--VKKYDTII 687 (850)
Q Consensus 612 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-~~~--~~~fD~v~ 687 (850)
...++.+||||| |+|.++..+++. ++.+|+|+|+|+++++.|++++++.|+. +++++++|+.+ ++. +++||+|+
T Consensus 169 ~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 169 GDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEE
Confidence 344688999999 999999999987 3479999999999999999999999987 89999999988 652 46899999
Q ss_pred EecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 688 SCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 688 s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
++..+.+.+ ...+++++.++|||||++++.+
T Consensus 247 ~~~p~~~~~---~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 247 TDPPETLEA---IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp ECCCSSHHH---HHHHHHHHHHTBCSTTCEEEEE
T ss_pred ECCCCchHH---HHHHHHHHHHHcccCCeEEEEE
Confidence 987765542 5899999999999999654433
No 276
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.25 E-value=3.2e-11 Score=134.19 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=98.1
Q ss_pred HHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---CC
Q 038410 605 SLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---EV 680 (850)
Q Consensus 605 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~~ 680 (850)
..+...++++++++|||+|||+|+.+..+++. ++.+|+++|+|+.+++.++++++..|+ +++++++|+.+++ ++
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTT
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhccc
Confidence 45566678899999999999999999999998 447999999999999999999999888 5899999998875 34
Q ss_pred CCccEEEEe------cchhhhChh--------------hHHHHHHHHHhccccCeEEEEEEecCC
Q 038410 681 KKYDTIISC------EMIENVGHE--------------YIEEFFGCCESLLAEHGLLLLQFSSVP 725 (850)
Q Consensus 681 ~~fD~v~s~------~~~~~~~~~--------------~~~~~~~~~~r~LkpgG~~~~~~~~~~ 725 (850)
++||+|++. +++.+.++. ....+++++.++|||||++++.+.+..
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 689999973 344443321 125889999999999999999887653
No 277
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.25 E-value=1.7e-11 Score=130.23 Aligned_cols=110 Identities=21% Similarity=0.238 Sum_probs=88.4
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCCEEEEEcccCCC-C-CCCCccEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE--AG-L-QDHIRLYLCDYRQM-P-EVKKYDTI 686 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~g-l-~~~v~~~~~D~~~~-~-~~~~fD~v 686 (850)
.++.+|||||||+|.++..++++ ++.+|++||+|+++++.|++++.. .+ + .++++++++|+.+. + .+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999988 467999999999999999998764 22 2 35899999998774 3 45789999
Q ss_pred EEecchhh-h-Ch-hh--HHHHHHHHHhccccCeEEEEEEec
Q 038410 687 ISCEMIEN-V-GH-EY--IEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 687 ~s~~~~~~-~-~~-~~--~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++....++ . +. .. ...++++++++|||||.++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99865533 0 21 11 378999999999999999997543
No 278
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.24 E-value=8.2e-12 Score=132.81 Aligned_cols=108 Identities=19% Similarity=0.317 Sum_probs=86.6
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCEEEEEcccCCC-C-CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE--AGL-QDHIRLYLCDYRQM-P-EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~gl-~~~v~~~~~D~~~~-~-~~~~fD~v~ 687 (850)
.++.+|||||||+|.++..++++ ++.+|+++|+|+++++.|++++.. .++ .++++++++|+.+. + .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999988 568999999999999999998765 233 35899999998763 2 357899999
Q ss_pred EecchhhhCh-hhH--HHHHHHHHhccccCeEEEEEEe
Q 038410 688 SCEMIENVGH-EYI--EEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 688 s~~~~~~~~~-~~~--~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+... .+++. ... ..+++++.++|||||.++++..
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8753 22221 112 7899999999999999999753
No 279
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.24 E-value=6.1e-12 Score=132.99 Aligned_cols=107 Identities=23% Similarity=0.307 Sum_probs=83.1
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCEEEEEcccCCC-C-CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA--GL-QDHIRLYLCDYRQM-P-EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--gl-~~~v~~~~~D~~~~-~-~~~~fD~v~ 687 (850)
.++.+|||||||+|..+..++++ +..+|++||+|+++++.|++++... ++ .++++++.+|+.+. + .+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45679999999999999999987 4689999999999999999987643 34 45899999998763 2 457899999
Q ss_pred EecchhhhCh-hhH--HHHHHHHHhccccCeEEEEEE
Q 038410 688 SCEMIENVGH-EYI--EEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 688 s~~~~~~~~~-~~~--~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+... .+++. +.. ..+++++.++|||||.++++.
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8653 33322 112 689999999999999999975
No 280
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=2.5e-11 Score=132.28 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=88.3
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCCccEEEEec
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKKYDTIISCE 690 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~fD~v~s~~ 690 (850)
.++|.+|||+|||+|.+++.+|+. |++|+++|+|+.+++.|+++++.+|+.+ ++.++|+.+.. ..+.||+|++..
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECC
T ss_pred hcCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECC
Confidence 357999999999999999999997 8889999999999999999999999864 56699987653 234599999875
Q ss_pred chhhhC-------hhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 691 MIENVG-------HEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 691 ~~~~~~-------~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
...+-+ .+.+..+++.+.++|||||.+++.+.+.
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 431111 1356789999999999999999766543
No 281
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.23 E-value=3.8e-11 Score=118.10 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=87.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE 693 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~ 693 (850)
.++.+|||||||.|-++..++ ++.+|+|+|||+.+++.+++++...|. +.++.++|+...++.++||+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 457799999999999999888 588999999999999999999988875 7899999998888667999999999999
Q ss_pred hhChhhHHHHHHHHHhccccCeEEEE
Q 038410 694 NVGHEYIEEFFGCCESLLAEHGLLLL 719 (850)
Q Consensus 694 ~~~~~~~~~~~~~~~r~LkpgG~~~~ 719 (850)
|+.++.....+ ++.+.|+++|.++-
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 88655555566 78889999977765
No 282
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.23 E-value=2.1e-11 Score=127.56 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=87.5
Q ss_pred CCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcC--C-CCCEEEEEcccCCCC--CCCCccEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAG--L-QDHIRLYLCDYRQMP--EVKKYDTI 686 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~g--l-~~~v~~~~~D~~~~~--~~~~fD~v 686 (850)
..++.+|||||||.|.++..+++. +..+|++||+|+++++.|++++...+ + .++++++++|+.+.. .+++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 356789999999999999999987 46799999999999999999875432 2 358999999987642 35789999
Q ss_pred EEecchhhhChhhH--HHHHHHHHhccccCeEEEEEEe
Q 038410 687 ISCEMIENVGHEYI--EEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 687 ~s~~~~~~~~~~~~--~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
++.....+.+...+ ..+++.++++|||||.++++..
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 99654332222222 6899999999999999999754
No 283
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.23 E-value=2.4e-11 Score=134.04 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=92.0
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-----CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-----EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-----~~~~fD~v~ 687 (850)
+++.+|||+|||+|.++..+++. |+ +|+|+|+|+++++.|+++++.+++.++++++++|+.+.. ..++||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 58899999999999999999997 55 999999999999999999999999778999999987653 256899999
Q ss_pred EecchhhhCh-------hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 688 SCEMIENVGH-------EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 688 s~~~~~~~~~-------~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+.....+.+. +.+..++.++.++|||||.+++.+..
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9653322111 45788999999999999999987654
No 284
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.22 E-value=9.9e-12 Score=129.98 Aligned_cols=108 Identities=20% Similarity=0.250 Sum_probs=84.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCCEEEEEcccCCCC-CCCC
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEA--GL--------QDHIRLYLCDYRQMP-EVKK 682 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~--gl--------~~~v~~~~~D~~~~~-~~~~ 682 (850)
.++.+|||||||+|.++..+++++..+|++||+|+++++.|++++ .. ++ .++++++.+|+.+.. .+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 456899999999999999999884569999999999999999987 33 33 458999999976532 1468
Q ss_pred ccEEEEecchhhhChhh--HHHHHHHHHhccccCeEEEEEEe
Q 038410 683 YDTIISCEMIENVGHEY--IEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 683 fD~v~s~~~~~~~~~~~--~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
||+|++......-+.+. ...+++++.++|||||.++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99999876532211111 27899999999999999999754
No 285
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.22 E-value=3.3e-11 Score=132.85 Aligned_cols=110 Identities=18% Similarity=0.095 Sum_probs=91.7
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCEEEEEcccCCCC-----CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGL-QDHIRLYLCDYRQMP-----EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl-~~~v~~~~~D~~~~~-----~~~~fD~v~ 687 (850)
.++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++.+|+ .++++++++|+.+.. ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 57889999999999999999997335999999999999999999999998 668999999987753 146899999
Q ss_pred EecchhhhC-------hhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 688 SCEMIENVG-------HEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 688 s~~~~~~~~-------~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+.......+ .+.+..++.++.++|||||.+++.+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 975432111 145788999999999999999996654
No 286
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.21 E-value=2.6e-11 Score=127.62 Aligned_cols=108 Identities=20% Similarity=0.279 Sum_probs=83.9
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCEEEEEcccCCC-C-CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKE--AGL-QDHIRLYLCDYRQM-P-EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~gl-~~~v~~~~~D~~~~-~-~~~~fD~v~ 687 (850)
.++.+|||||||+|.++..++++ +..+|++||+|+++++.|++++.. .++ .++++++++|+.+. + .+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45589999999999999999988 468999999999999999998764 334 35899999997663 3 357899999
Q ss_pred EecchhhhChh---hHHHHHHHHHhccccCeEEEEEE
Q 038410 688 SCEMIENVGHE---YIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 688 s~~~~~~~~~~---~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+...-.+++.. ....+++++.++|||||.++++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 86432213211 23689999999999999999964
No 287
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.20 E-value=4.9e-11 Score=128.06 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=89.3
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE 693 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~ 693 (850)
+++.+|||+|||+|.+++. ++. +++|+|+|+|+.+++.|+++++.+++.++++++++|+.+.. ++||+|++.....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKN-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTT-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-ccC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHh
Confidence 5889999999999999999 884 78999999999999999999999999779999999998876 7899999974322
Q ss_pred hhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 694 NVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 694 ~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
...+++.+.++|+|||.+++.++..
T Consensus 270 ------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 270 ------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 2378999999999999999977754
No 288
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.20 E-value=1.8e-11 Score=127.34 Aligned_cols=109 Identities=19% Similarity=0.236 Sum_probs=86.0
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCEEEEEcccCCC-C-CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA--GL-QDHIRLYLCDYRQM-P-EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--gl-~~~v~~~~~D~~~~-~-~~~~fD~v~ 687 (850)
.++.+|||||||+|.+++.++++ +..+|++||+|+++++.|++++... ++ .++++++.+|+.+. + .+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35679999999999999999988 4579999999999999999987542 34 35899999998763 2 357899999
Q ss_pred EecchhhhChh--hHHHHHHHHHhccccCeEEEEEEe
Q 038410 688 SCEMIENVGHE--YIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 688 s~~~~~~~~~~--~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+.......+.. ....+++++.++|||||.++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 96543221111 126899999999999999999643
No 289
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.20 E-value=5.5e-11 Score=125.33 Aligned_cols=110 Identities=21% Similarity=0.295 Sum_probs=85.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
...+.+++.+.+.++++|||||||+|.++..++++ +.+|+|+|+|+.+++.++++++..++ ++++++++|+.+++. .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-c
Confidence 45678888888999999999999999999999997 88999999999999999999987777 489999999988764 4
Q ss_pred CccEEEEecchhhhChhhHHHHH---------------HHHHhccccCe
Q 038410 682 KYDTIISCEMIENVGHEYIEEFF---------------GCCESLLAEHG 715 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~---------------~~~~r~LkpgG 715 (850)
+||+|+++..+... .+.....+ +.+.|+++|+|
T Consensus 106 ~~D~Vv~n~py~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 106 KFDVCTANIPYKIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCSEEEEECCGGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cCCEEEEcCCcccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 89999998665543 22233333 34667777776
No 290
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.19 E-value=8.1e-11 Score=127.17 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=94.8
Q ss_pred HHHHHHc-CCCCCCeEEEEccCccHHHHHHHHh-cC-----CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC
Q 038410 605 SLLIEKA-RVNKGLDVLEIGCGWGTLAIEIVKQ-TG-----CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM 677 (850)
Q Consensus 605 ~~~~~~l-~~~~~~~vLDiGcG~G~~~~~la~~-~~-----~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~ 677 (850)
..+++.+ ..+++.+|||+|||+|.++..+++. +. .+++|+|+++.+++.|+.++...|+ +++++++|..+.
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~ 196 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN 196 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc
Confidence 4455544 4557789999999999999999887 32 7999999999999999999988887 689999998765
Q ss_pred CCCCCccEEEEecchhhhChhhH----------------HHHHHHHHhccccCeEEEEEEe
Q 038410 678 PEVKKYDTIISCEMIENVGHEYI----------------EEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 678 ~~~~~fD~v~s~~~~~~~~~~~~----------------~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
...++||+|+++..+.+++.+.. ..+++.+.+.|||||++++...
T Consensus 197 ~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 197 LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 45578999999998877643221 2689999999999999998664
No 291
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.19 E-value=3.3e-11 Score=132.06 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=90.4
Q ss_pred CCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-----CCCCccEEEEe
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-----EVKKYDTIISC 689 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-----~~~~fD~v~s~ 689 (850)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++.+ ++++++|+.+.. ..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7889999999999999999998 7899999999999999999999999874 999999987753 15789999996
Q ss_pred cchhhhC-------hhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 690 EMIENVG-------HEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 690 ~~~~~~~-------~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
......+ .+.+..++..+.++|||||.+++.+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4321111 145788999999999999999997654
No 292
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=6.3e-11 Score=138.95 Aligned_cols=107 Identities=19% Similarity=0.219 Sum_probs=91.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEEcccCCC-C-CCCCccEEEEe
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQ-DHIRLYLCDYRQM-P-EVKKYDTIISC 689 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~-~~v~~~~~D~~~~-~-~~~~fD~v~s~ 689 (850)
.+|.+|||+|||+|.+++.+++. |+ +|++||+|+.+++.|+++++.+|+. ++++++++|+.+. + ..++||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 36889999999999999999986 55 6999999999999999999999997 6899999998774 2 45789999996
Q ss_pred cc-----------hhhhChhhHHHHHHHHHhccccCeEEEEEEec
Q 038410 690 EM-----------IENVGHEYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 690 ~~-----------~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
.. +.+. +.+..+++.+.++|||||.+++.+..
T Consensus 617 PP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 53 3333 56889999999999999999976543
No 293
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.18 E-value=4.9e-11 Score=117.90 Aligned_cols=108 Identities=18% Similarity=0.183 Sum_probs=80.8
Q ss_pred HHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHhcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEE-E
Q 038410 604 VSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQTG----------CKYTGITLSEEQLKYTETKVKEAGLQDHIRLY-L 671 (850)
Q Consensus 604 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~-~ 671 (850)
+..+.++.. ++++.+|||||||+|.++..++++.+ ++|+|+|+|+.+ .+ .+++++ +
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~ 77 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCP 77 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECS
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEe
Confidence 334444444 58899999999999999999999843 799999999842 22 368899 8
Q ss_pred cccCCCC---------CCCCccEEEEecchhhhChh--hH-------HHHHHHHHhccccCeEEEEEEec
Q 038410 672 CDYRQMP---------EVKKYDTIISCEMIENVGHE--YI-------EEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 672 ~D~~~~~---------~~~~fD~v~s~~~~~~~~~~--~~-------~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+|+.+.. ++++||+|++..+++..+.. +. ..+++++.++|||||++++..+.
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 78 ADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 9977642 23589999997655433211 11 47899999999999999997653
No 294
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=1.6e-10 Score=125.97 Aligned_cols=120 Identities=14% Similarity=0.182 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cC--------------------------------------CEEEE
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 643 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 643 (850)
....++...+.+++..|||.+||+|.+++.+|.. .+ .+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 3456778888899999999999999999999876 22 46999
Q ss_pred EeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh-hhCh-hhHHHHHHHHHhcccc--CeEEEE
Q 038410 644 ITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE-NVGH-EYIEEFFGCCESLLAE--HGLLLL 719 (850)
Q Consensus 644 id~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~-~~~~-~~~~~~~~~~~r~Lkp--gG~~~~ 719 (850)
+|+|+.+++.|+++++.+|+.+++++.++|+.+++...+||+|+++..+. .+++ +....+++.+.+.||+ ||.+++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 99999999999999999999888999999999988556999999997652 2332 3456677777777776 898888
Q ss_pred EEe
Q 038410 720 QFS 722 (850)
Q Consensus 720 ~~~ 722 (850)
.+.
T Consensus 349 it~ 351 (393)
T 3k0b_A 349 LTS 351 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 544
No 295
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.16 E-value=1.5e-10 Score=126.02 Aligned_cols=120 Identities=18% Similarity=0.226 Sum_probs=100.1
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cC--------------------------------------CEEEE
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 643 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 643 (850)
....++...+.+++.+|||++||+|.+++.+|.. .+ .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 3446777888889999999999999999999876 21 57999
Q ss_pred EeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh-hhC-hhhHHHHHHHHHhcccc--CeEEEE
Q 038410 644 ITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE-NVG-HEYIEEFFGCCESLLAE--HGLLLL 719 (850)
Q Consensus 644 id~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~-~~~-~~~~~~~~~~~~r~Lkp--gG~~~~ 719 (850)
+|+|+.+++.|++++..+|+.+++++.++|+.+++.+++||+|+++..+. .++ .+....+++++.+.||+ |+.+++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999999999999999889999999999988557999999998753 333 24567788888888887 888887
Q ss_pred EEe
Q 038410 720 QFS 722 (850)
Q Consensus 720 ~~~ 722 (850)
.+.
T Consensus 343 it~ 345 (385)
T 3ldu_A 343 ITS 345 (385)
T ss_dssp EES
T ss_pred EEC
Confidence 543
No 296
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.15 E-value=2.7e-10 Score=125.51 Aligned_cols=108 Identities=16% Similarity=0.215 Sum_probs=87.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVK 681 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~ 681 (850)
+.++.+++ +.++.+|||+|||+|.++..+|+. +.+|+|+|+|+++++.|+++++.+++. ++++++|+.++.+.
T Consensus 280 ~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~- 352 (425)
T 2jjq_A 280 NLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK- 352 (425)
T ss_dssp HHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-
T ss_pred HHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-
Confidence 33444444 567889999999999999999997 889999999999999999999998885 99999999988643
Q ss_pred CccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 682 KYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 682 ~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
+||+|++........ ..+++.+. .|+|+|.++++.
T Consensus 353 ~fD~Vv~dPPr~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 353 GFDTVIVDPPRAGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TCSEEEECCCTTCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CCCEEEEcCCccchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 899999976543331 34566665 489999999853
No 297
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.14 E-value=7.5e-11 Score=131.89 Aligned_cols=121 Identities=11% Similarity=0.101 Sum_probs=99.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--------------cCCEEEEEeCCHHHHHHHHHHHHHcCCCC-C
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--------------TGCKYTGITLSEEQLKYTETKVKEAGLQD-H 666 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--------------~~~~v~gid~s~~~~~~a~~~~~~~gl~~-~ 666 (850)
...+.|++.+...++.+|||.|||+|+++..+++. .+.+++|+|+++.+++.|+.++...|+.. +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 34567777778888999999999999999998875 24789999999999999999998888853 6
Q ss_pred EEEEEcccCCCCCCCCccEEEEecchhhhChhh---------------HHHHHHHHHhccccCeEEEEEEe
Q 038410 667 IRLYLCDYRQMPEVKKYDTIISCEMIENVGHEY---------------IEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 667 v~~~~~D~~~~~~~~~fD~v~s~~~~~~~~~~~---------------~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+++.++|....+..++||+|+++..+.+..... ...+++.+.++|||||++++...
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 789999988776446899999998877643211 24789999999999999988664
No 298
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.14 E-value=4.5e-10 Score=116.96 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=78.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
...++.+++.+.+.++++|||||||+|.++..++++ +.+|+|||+|+++++.+++++... ++++++++|+.+++ +
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcc
Confidence 345678999999999999999999999999999998 889999999999999999998732 38999999999887 5
Q ss_pred CCCccEEEEecchhh
Q 038410 680 VKKYDTIISCEMIEN 694 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~ 694 (850)
+.+||+|+++..+..
T Consensus 112 ~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 112 KLDFNKVVANLPYQI 126 (295)
T ss_dssp GSCCSEEEEECCGGG
T ss_pred cCCccEEEEeCcccc
Confidence 567999999866543
No 299
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=4.8e-10 Score=121.59 Aligned_cols=120 Identities=14% Similarity=0.185 Sum_probs=99.9
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cC--------------------------------------CEEEE
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 643 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 643 (850)
....++...+.+++..|||.+||+|.+++.+|.. .+ .+|+|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3346777888899999999999999999999875 22 46999
Q ss_pred EeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEecchh-hhCh-hhHHHHHHHHHhcccc--CeEEEE
Q 038410 644 ITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISCEMIE-NVGH-EYIEEFFGCCESLLAE--HGLLLL 719 (850)
Q Consensus 644 id~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~~~~~-~~~~-~~~~~~~~~~~r~Lkp--gG~~~~ 719 (850)
+|+|+.+++.|+++++.+|+.+++++.++|+.+++...+||+|+++..+. -+++ +....+++.+.+.||+ ||.+++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 99999999999999999999989999999999988556999999997653 2332 4567788888888887 999888
Q ss_pred EEe
Q 038410 720 QFS 722 (850)
Q Consensus 720 ~~~ 722 (850)
.+.
T Consensus 342 it~ 344 (384)
T 3ldg_A 342 LTN 344 (384)
T ss_dssp EES
T ss_pred EEC
Confidence 554
No 300
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.13 E-value=3.9e-10 Score=125.42 Aligned_cols=131 Identities=15% Similarity=0.208 Sum_probs=101.2
Q ss_pred CCCcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Q 038410 579 GKSMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKV 658 (850)
Q Consensus 579 ~~~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~ 658 (850)
+-.+.++...|-..+ .......++.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|++++
T Consensus 253 g~~~~~~~~~f~q~n---~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~ 328 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVN---AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNA 328 (433)
T ss_dssp TEEEECCSSSCCCSB---HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECcccccccC---HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHH
Confidence 445555655554332 2233556778888888888999999999999999999998 889999999999999999999
Q ss_pred HHcCCCCCEEEEEcccCCCC-----CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 659 KEAGLQDHIRLYLCDYRQMP-----EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 659 ~~~gl~~~v~~~~~D~~~~~-----~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
+.+++. +++|+++|+.+.. .+++||+|++.....-. ..+++.+.+ ++|++.++++
T Consensus 329 ~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 329 RLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp HHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred HHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 999987 8999999998732 34689999997654332 245555544 7899988874
No 301
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.12 E-value=2.6e-11 Score=127.68 Aligned_cols=115 Identities=15% Similarity=0.157 Sum_probs=82.1
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeC----CHHHHHHHHHHHHHcCCCCCEEEEEc-ccCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITL----SEEQLKYTETKVKEAGLQDHIRLYLC-DYRQM 677 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~----s~~~~~~a~~~~~~~gl~~~v~~~~~-D~~~~ 677 (850)
|+..+.++..++++.+|||||||+|.++..++++ .+|+|||+ ++.+++.+. .+..+ .++++++++ |+.++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l 144 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI 144 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC
Confidence 3445666645688999999999999999999997 58999999 665442211 11112 147999999 98887
Q ss_pred CCCCCccEEEEecchh---hhChh-hHHHHHHHHHhccccCeEEEEEEec
Q 038410 678 PEVKKYDTIISCEMIE---NVGHE-YIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 678 ~~~~~fD~v~s~~~~~---~~~~~-~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+ .++||+|+|..++. +..+. ....+++.+.++|||||.+++..+.
T Consensus 145 ~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 145 P-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp C-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred C-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5 46899999976653 22111 0115789999999999999986543
No 302
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.10 E-value=6.3e-10 Score=124.87 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecChHH
Q 038410 210 HSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 210 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
....+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+|++++||.||+|++...
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 34678899999999999999999999999988777 788888887799999999998765
No 303
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.09 E-value=2.1e-10 Score=117.19 Aligned_cols=113 Identities=23% Similarity=0.381 Sum_probs=84.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
....+.+++.+++.++++|||||||+|.++..++++ +.+|+|+|+|+++++.+++++... ++++++++|+.+++ +
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcc
Confidence 345678888888899999999999999999999998 799999999999999999987532 48999999999887 3
Q ss_pred C-CCccEEEEecchhhhChhhHHH----------HH----HHHHhccccCeEEEE
Q 038410 680 V-KKYDTIISCEMIENVGHEYIEE----------FF----GCCESLLAEHGLLLL 719 (850)
Q Consensus 680 ~-~~fD~v~s~~~~~~~~~~~~~~----------~~----~~~~r~LkpgG~~~~ 719 (850)
+ ..| .|+++..+. +...-... ++ +.+.|+|+|+|.+.+
T Consensus 92 ~~~~~-~vv~nlPy~-~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v 144 (244)
T 1qam_A 92 KNQSY-KIFGNIPYN-ISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLAL 144 (244)
T ss_dssp SSCCC-EEEEECCGG-GHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHH
T ss_pred cCCCe-EEEEeCCcc-cCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhH
Confidence 2 355 566664432 21111112 22 447778888876543
No 304
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.07 E-value=1e-10 Score=120.46 Aligned_cols=98 Identities=15% Similarity=0.005 Sum_probs=81.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCEEEEEcccCCCCCCCCccEEEEec
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKE--AGL-QDHIRLYLCDYRQMPEVKKYDTIISCE 690 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~--~gl-~~~v~~~~~D~~~~~~~~~fD~v~s~~ 690 (850)
..+.+|||||||+|.++..++++ +.+|+++|+|+++++.|++++.. .++ .++++++.+|..+.. ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 45679999999999999999988 59999999999999999987532 112 348999999998875 7899999872
Q ss_pred chhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 691 MIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
.+ +..+++.+.++|||||.++++.
T Consensus 148 -----~d--p~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EP--DIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CC--CHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CC--hHHHHHHHHHhcCCCcEEEEEc
Confidence 22 2459999999999999999964
No 305
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.07 E-value=6.3e-10 Score=122.57 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=49.7
Q ss_pred ChHHHHHHHHHHhhccCceEeeCCceEEEEec----CCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 210 HSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPA----DEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 210 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~----~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
....+.+.|.+.+++.|++|+++++|++|..+ ++++.|++.+| +++||+||+|++...
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 34578888999888889999999999999987 66788988777 699999999998664
No 306
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.07 E-value=5.8e-10 Score=123.35 Aligned_cols=56 Identities=5% Similarity=-0.086 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEee---CCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVCV---NGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~---~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.|++|+.+++|++|+.+++++. |++. ++.+++||.||.|++.+.
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 5667788888778999999999999999888876 7763 456799999999998764
No 307
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.07 E-value=9.3e-10 Score=122.17 Aligned_cols=54 Identities=9% Similarity=0.035 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++ ++|+++++|++|+.++++|.|++.+|++++||.||.|.+.+.
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 567778888765 899999999999999999999999999999999999998763
No 308
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.07 E-value=4.6e-10 Score=116.28 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=73.5
Q ss_pred cCCCCCCeEEEEcc------CccHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEE-EEcccCCCCCCC
Q 038410 611 ARVNKGLDVLEIGC------GWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYTETKVKEAGLQDHIRL-YLCDYRQMPEVK 681 (850)
Q Consensus 611 l~~~~~~~vLDiGc------G~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~-~~~D~~~~~~~~ 681 (850)
+.++++++|||+|| |.|. ..+++. + +++|+|+|+|+. + +++++ +++|+.+++..+
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~~ 122 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTAN 122 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCSS
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCccC
Confidence 46789999999999 4477 445555 3 589999999998 1 26888 999999887557
Q ss_pred CccEEEEecchhhh---------ChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMIENV---------GHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~~~~---------~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|+|+...++. ....+..+++++.++|||||++++..+
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 89999997432211 112356899999999999999999654
No 309
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.06 E-value=1.8e-09 Score=113.60 Aligned_cols=117 Identities=14% Similarity=0.057 Sum_probs=90.0
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC---
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV--- 680 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~--- 680 (850)
.+...+.+++|++|||+|||.|+.+.++|+. ...+|+++|+|+++++.+++++++.|+. +++++++|+.++...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGG
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccc
Confidence 4455677899999999999999999999986 3479999999999999999999999985 799999999887621
Q ss_pred -CCccEEEEe------cchhhhCh---------hh-------HHHHHHHHHhccccCeEEEEEEecC
Q 038410 681 -KKYDTIISC------EMIENVGH---------EY-------IEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 681 -~~fD~v~s~------~~~~~~~~---------~~-------~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
++||.|++. +++..-++ ++ ...+++.+.++|| ||+++..+.+.
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 579999973 23322111 11 2346778888887 99988877664
No 310
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.05 E-value=4.9e-10 Score=129.03 Aligned_cols=57 Identities=11% Similarity=-0.028 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeC---C--cEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVN---G--SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~---G--~~i~ad~VV~A~p~~~ 268 (850)
..++..|++.+.+.|++|+.+++|++|..+++++ .|++.+ | .+++||.||+|++++.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5788999999999999999999999999988874 576654 3 3689999999999885
No 311
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.05 E-value=4.9e-08 Score=104.56 Aligned_cols=173 Identities=12% Similarity=0.136 Sum_probs=108.1
Q ss_pred HHHHHHHHHHcCCCC-----CCeEEEEccCccHHHHHHHHh----------------cCCEEEEEeCCHHHHHHHHHHHH
Q 038410 601 MRKVSLLIEKARVNK-----GLDVLEIGCGWGTLAIEIVKQ----------------TGCKYTGITLSEEQLKYTETKVK 659 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~-----~~~vLDiGcG~G~~~~~la~~----------------~~~~v~gid~s~~~~~~a~~~~~ 659 (850)
+.+++..++.+.+.. ..+|+|+|||+|..+..++.. +..+|..-|+........=+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 455566667776654 578999999999999987432 23566666666555433322221
Q ss_pred Hc-----------CCCCCEEEEEccc----CCCCCCCCccEEEEecchhhhCh---------------------------
Q 038410 660 EA-----------GLQDHIRLYLCDY----RQMPEVKKYDTIISCEMIENVGH--------------------------- 697 (850)
Q Consensus 660 ~~-----------gl~~~v~~~~~D~----~~~~~~~~fD~v~s~~~~~~~~~--------------------------- 697 (850)
.. +...+--|..+.. ..+-|+++||+|+|+.++||+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 10 0000111222221 12226789999999999999851
Q ss_pred ---------hhHHHHHHHHHhccccCeEEEEEEecCCCCcCCC----------C--------cC----ccccccccccCC
Q 038410 698 ---------EYIEEFFGCCESLLAEHGLLLLQFSSVPDQCYDG----------H--------RL----SPGFITEYVFPG 746 (850)
Q Consensus 698 ---------~~~~~~~~~~~r~LkpgG~~~~~~~~~~~~~~~~----------~--------~~----~~~~~~~~i~p~ 746 (850)
+++..+++..++.|||||++++......+..... . .. ...++..+-.|
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P- 271 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIP- 271 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcc-
Confidence 2567789999999999999999988775531110 0 00 00111112234
Q ss_pred CCCCCHHHHHHHHhcCCceEEEEeeecC
Q 038410 747 GCLPSLNRITSAMTSSSRLCVEHLENIG 774 (850)
Q Consensus 747 ~~~~~~~~~~~~~~~~~gf~v~~~~~~~ 774 (850)
-+.|+.+++...+++..||++..++.+.
T Consensus 272 ~y~ps~~E~~~~l~~~~~F~I~~le~~~ 299 (374)
T 3b5i_A 272 VYAPSLQDFKEVVDANGSFAIDKLVVYK 299 (374)
T ss_dssp BCCCCHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEEEEEe
Confidence 3679999999988865799999887653
No 312
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.04 E-value=2.7e-09 Score=118.00 Aligned_cols=55 Identities=13% Similarity=0.005 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDA 269 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~ 269 (850)
.+.+.|.+.+. |++|+++++|++|+.++++|.|++.+|++++||.||.|.+....
T Consensus 100 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 100 SIYGGLYELFG--PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHHHC--STTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHHhCC--CcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 34455555553 88999999999999999999999999988999999999987643
No 313
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.03 E-value=4.6e-10 Score=125.23 Aligned_cols=111 Identities=19% Similarity=0.293 Sum_probs=88.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV 680 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~ 680 (850)
..+.+++.+...++.+|||+|||+|.++..++++ .+.+|+|+|+++++++.| ++++++++|+.+..+.
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~ 96 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG 96 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc
Confidence 4456777777666779999999999999999987 468999999999999877 3799999999887766
Q ss_pred CCccEEEEecchhh----------hChh-----------------hHHHHHHHHHhccccCeEEEEEEec
Q 038410 681 KKYDTIISCEMIEN----------VGHE-----------------YIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~----------~~~~-----------------~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++||+|+++..+.. +.++ ....+++.+.++|||||++++....
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 79999999754422 2111 1236799999999999999986654
No 314
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.02 E-value=5.1e-10 Score=127.15 Aligned_cols=56 Identities=23% Similarity=0.267 Sum_probs=50.0
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.|++|+++++|++|..+++++ .|++.+|+++.||.||+|++...
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 677888888888899999999999999988775 58899998999999999998864
No 315
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.98 E-value=3.7e-09 Score=120.03 Aligned_cols=62 Identities=8% Similarity=-0.035 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCc---EEeCCEEEEecChHH-HHHhhc
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGS---QEFYNGCVMAVHAPD-ALRILG 274 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~i~ad~VV~A~p~~~-~~~ll~ 274 (850)
.+.+.|.+.+++.|++|+++++|++|+.++++|+|++.+|. +++||.||.|.+.+. +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 56667777787789999999999999999999999888775 799999999999875 334443
No 316
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.98 E-value=4.5e-10 Score=115.16 Aligned_cols=115 Identities=10% Similarity=0.057 Sum_probs=86.2
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCCEEEEEcccCCCC
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSE-------EQLKYTETKVKEAGLQDHIRLYLCDYRQMP 678 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~-------~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~ 678 (850)
.+.+.+.+.++.+|||+|||+|.+++.+|+. +++|+|+|+|+ ++++.|+++++.+++.++++++++|+.++.
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM 152 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH
Confidence 3444445667889999999999999999997 89999999999 999999998888777667999999988752
Q ss_pred ---CC--CCccEEEEecchhhhCh------------------hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 679 ---EV--KKYDTIISCEMIENVGH------------------EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 679 ---~~--~~fD~v~s~~~~~~~~~------------------~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
++ ++||+|++..++.+... .+...+++.+.++.+. ++++....
T Consensus 153 ~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~ 218 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPR 218 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEET
T ss_pred HhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCC
Confidence 22 68999999888766421 1344556666676543 56665544
No 317
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.98 E-value=3.7e-09 Score=120.12 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=51.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCc---EEeCCEEEEecChHHH-HHhhc
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGS---QEFYNGCVMAVHAPDA-LRILG 274 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~i~ad~VV~A~p~~~~-~~ll~ 274 (850)
.+.+.|.+.+++.|++|+++++|++|+.++++|+|++.+|. +++||.||.|.+.+.. .+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 56667777787789999999999999999999999888775 7999999999988743 34443
No 318
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.98 E-value=2.6e-09 Score=109.13 Aligned_cols=86 Identities=16% Similarity=0.226 Sum_probs=74.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C-
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E- 679 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~- 679 (850)
...+.+++.+++.++++|||||||+|.++..++++ +.+|++||+|+++++.+++++.. .++++++++|+.+++ +
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 45678999999999999999999999999999998 78999999999999999999864 348999999999886 2
Q ss_pred ---CCCccEEEEecch
Q 038410 680 ---VKKYDTIISCEMI 692 (850)
Q Consensus 680 ---~~~fD~v~s~~~~ 692 (850)
.++|| |+++-.+
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 35688 7777554
No 319
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.98 E-value=2.1e-09 Score=110.60 Aligned_cols=109 Identities=19% Similarity=0.241 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EV 680 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~ 680 (850)
..++.+++.+++.++ +|||||||+|.++..++++ +++|+++|+|+++++.+++++.. ++++++++|+.+++ ++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhh
Confidence 456789999999999 9999999999999999998 78999999999999999998752 48999999999887 32
Q ss_pred -CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 681 -KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 681 -~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
..||.|+++..+. ++..-+..++.. ..-+.+.+.+|
T Consensus 108 ~~~~~~iv~NlPy~-iss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 108 VPQGSLLVANLPYH-IATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp SCTTEEEEEEECSS-CCHHHHHHHHHH---CCEEEEEEEEE
T ss_pred ccCccEEEecCccc-ccHHHHHHHhcC---CCCCEEEEEee
Confidence 3689999987654 443323333333 12234555555
No 320
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.98 E-value=9.6e-10 Score=121.71 Aligned_cols=62 Identities=15% Similarity=-0.004 Sum_probs=53.3
Q ss_pred HHHHHHHHHhhcc-CceEeeCCceEEEEecCCce--EEEeeCCcEEeCCEEEEecChHHH-HHhhc
Q 038410 213 SQIDKVSEQLKSW-GIQIRMSCEVYSVFPADEGC--SIVCVNGSQEFYNGCVMAVHAPDA-LRILG 274 (850)
Q Consensus 213 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v--~V~~~~G~~i~ad~VV~A~p~~~~-~~ll~ 274 (850)
.+.+.|.+.+++. |++|+++++|++|+.++++| .|++.+|++++||.||.|++.+.. .+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 6777888889887 89999999999999998888 899999988999999999987643 34443
No 321
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.97 E-value=6.7e-10 Score=123.42 Aligned_cols=54 Identities=17% Similarity=0.101 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCC-ceEEEeeCCcEEeCCEEEEecChHHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADE-GCSIVCVNGSQEFYNGCVMAVHAPDA 269 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~i~ad~VV~A~p~~~~ 269 (850)
.|.+.|.+.+ +.+|+++++|++++..++ +|+|+++||++++||.||-|-+....
T Consensus 113 ~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 113 ELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp HHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcc
Confidence 3555566655 567999999999987654 58999999999999999999987743
No 322
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.96 E-value=1e-09 Score=122.36 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCce--EEEeeCCc--EEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC--SIVCVNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v--~V~~~~G~--~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++.|++|+.+++|++|+.+++++ .|.+.+|+ +++||.||.|++...
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 566778888887899999999999999987774 56678887 699999999998764
No 323
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.95 E-value=9.7e-09 Score=112.70 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHHH-HHhh
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPDA-LRIL 273 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~~-~~ll 273 (850)
.+.+.|.+.+++.|++|+++++|++|+. ++ .|++.+|++++||.||.|++.... .+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 5777788888888999999999999988 34 888888988999999999987643 3444
No 324
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.94 E-value=3.2e-09 Score=115.52 Aligned_cols=111 Identities=9% Similarity=0.157 Sum_probs=88.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-- 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-- 678 (850)
..+++.+++.+... +.+|||+|||+|.+++.+|+. ..+|+|+|+|+++++.|+++++.+|+. +++++++|+.++.
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHH
Confidence 45667778877655 578999999999999999985 779999999999999999999999985 8999999987652
Q ss_pred -CC--------------CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 679 -EV--------------KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 679 -~~--------------~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
.. .+||+|+....-. .+..++.+.|+|+|+++..+.
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEES
T ss_pred HhhccccccccccccccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEEC
Confidence 11 3799999764322 134456677788898887554
No 325
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.94 E-value=5.1e-09 Score=118.99 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCCeEEEEccCccHH---HHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCCCCccEEEEe
Q 038410 615 KGLDVLEIGCGWGTL---AIEIVKQTGC--KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDTIISC 689 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~---~~~la~~~~~--~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~~~fD~v~s~ 689 (850)
.+..|||||||+|-+ +..++++.+. +|++||.|+ +...|++..+++++.++|+++++|++++..+++.|+|||-
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEE
Confidence 345799999999998 5555555333 789999997 6788999999999999999999999999855899999997
Q ss_pred cchhhhChhhHHHHHHHHHhccccCeEEE
Q 038410 690 EMIENVGHEYIEEFFGCCESLLAEHGLLL 718 (850)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~r~LkpgG~~~ 718 (850)
.|=...-.+.....+....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 65444333445678888999999999875
No 326
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.93 E-value=1.3e-08 Score=117.83 Aligned_cols=56 Identities=13% Similarity=0.114 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecC-Cce-EEEee--CCc--EEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPAD-EGC-SIVCV--NGS--QEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v-~V~~~--~G~--~i~ad~VV~A~p~~ 267 (850)
..+.+.|.+.+++.|++|+++++|++|..++ ++| .|+.. +|+ ++.||.||+|++.+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 4788899999999999999999999999876 654 34443 675 68999999999875
No 327
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.93 E-value=7.1e-09 Score=119.60 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEec-CCceEEEee-CC--cEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPA-DEGCSIVCV-NG--SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v~V~~~-~G--~~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++.|++|+.+++|++|..+ ++.+.|++. +| .+++||.||.|++...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 57777888888889999999999999986 445788887 67 5799999999998764
No 328
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.93 E-value=8.8e-09 Score=118.83 Aligned_cols=57 Identities=2% Similarity=-0.144 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEee---CCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCV---NGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~---~G~--~i~ad~VV~A~p~~~ 268 (850)
..++..+++.+.+.|++|+.+++|++|..+++++ .|++. +|+ +++||.||+|++++.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4688888888889999999999999999988774 46543 343 689999999999985
No 329
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.93 E-value=3.8e-09 Score=121.55 Aligned_cols=61 Identities=16% Similarity=0.015 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCC----ceEEEeeCC---cEEeCCEEEEecChHH-HHHhh
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADE----GCSIVCVNG---SQEFYNGCVMAVHAPD-ALRIL 273 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~----~v~V~~~~G---~~i~ad~VV~A~p~~~-~~~ll 273 (850)
.+...|.+.+++.|++|+++++|++|+.+++ +|+|++.++ .+++||.||.|.+.+. +.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 5667788888888999999999999999988 888888876 6899999999998864 33444
No 330
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.92 E-value=3.4e-09 Score=114.73 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=84.7
Q ss_pred CCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCCEEEEEcccCCCC
Q 038410 615 KGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA---------------GLQDHIRLYLCDYRQMP 678 (850)
Q Consensus 615 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~---------------gl~~~v~~~~~D~~~~~ 678 (850)
++.+|||+|||+|.+++.++++ .+.+|+++|+|+++++.++++++.+ ++.+ ++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHH
Confidence 6889999999999999999998 5679999999999999999999998 8864 999999987654
Q ss_pred --CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 679 --EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 679 --~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
..++||+|+... ... ...+++.+.+.|||||.++++.
T Consensus 126 ~~~~~~fD~I~lDP-~~~-----~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-FGS-----PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-SSC-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-CCC-----HHHHHHHHHHhcCCCCEEEEEe
Confidence 235799999653 221 2578999999999999888854
No 331
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.92 E-value=2.3e-09 Score=123.55 Aligned_cols=61 Identities=15% Similarity=0.055 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEe--eCC-cEEeCCEEEEecChHH-HHHhh
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVC--VNG-SQEFYNGCVMAVHAPD-ALRIL 273 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~--~~G-~~i~ad~VV~A~p~~~-~~~ll 273 (850)
.+.+.|.+.+++.|++|+.+++|++|+.++++|+|++ .+| ++++||.||.|.+.+. +.+.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 5666777777777999999999999999999988877 678 6899999999998764 33444
No 332
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.91 E-value=3.1e-09 Score=121.29 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=46.7
Q ss_pred ChHHHHHHHHHHhhccCceEeeCCceEEEEec-CCce-EEEee-CCc--EEeCC-EEEEecChHH
Q 038410 210 HSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPA-DEGC-SIVCV-NGS--QEFYN-GCVMAVHAPD 268 (850)
Q Consensus 210 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v-~V~~~-~G~--~i~ad-~VV~A~p~~~ 268 (850)
|...+.+.|.+.+++.|++|+++++|++|..+ +++| .|.+. +|+ ++.|| .||+|++...
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 33479999999999999999999999999998 5654 45544 332 58896 9999998753
No 333
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.91 E-value=8.2e-09 Score=114.11 Aligned_cols=54 Identities=9% Similarity=0.039 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.++ +++|+++++|++|+.++++|.|++.+|++++||.||.|.+...
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 56666777775 3689999999999999888999999998899999999999864
No 334
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.91 E-value=1.1e-08 Score=118.25 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecC-Cce-EEEee--CCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPAD-EGC-SIVCV--NGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v-~V~~~--~G~--~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++.|++|+++++|++|..++ ++| .|++. +|+ ++.||.||+|++.+.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 5688999999999999999999999999887 664 35443 675 688999999998754
No 335
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.90 E-value=4.6e-09 Score=115.97 Aligned_cols=57 Identities=7% Similarity=-0.063 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecC-CceEEEe-eCCc--EEeCCEEEEecChHHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPAD-EGCSIVC-VNGS--QEFYNGCVMAVHAPDA 269 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~i~ad~VV~A~p~~~~ 269 (850)
.+.+.|.+.+.+.|++|+++++|++|+.++ +++.|++ .+|+ +++||.||.|.+.+..
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 455667777777799999999999999864 5688887 7887 6999999999998643
No 336
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.90 E-value=3.2e-09 Score=121.45 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=43.0
Q ss_pred HHHHHHHHhhccCc--eEeeCCceEEEEecCC--ceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGI--QIRMSCEVYSVFPADE--GCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~--~i~~~~~V~~I~~~~~--~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|. +|+++++|++++.+++ .|.|++.+|+++.||.||+|++..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 33344444445576 8999999999998766 689999999889999999999964
No 337
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.90 E-value=2.1e-09 Score=116.22 Aligned_cols=102 Identities=13% Similarity=0.076 Sum_probs=86.1
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCC-EEEEEcccCCCC---CCCCccEEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYTETKVKEAGLQDH-IRLYLCDYRQMP---EVKKYDTII 687 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~-v~~~~~D~~~~~---~~~~fD~v~ 687 (850)
++|.+|||++||+|.+++.+|++ .| .+|+++|++++.++.++++++.+|++++ ++++++|+.++. ..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 57899999999999999999986 35 5899999999999999999999999877 999999975542 135799999
Q ss_pred EecchhhhChhhHHHHHHHHHhccccCeEEEEEE
Q 038410 688 SCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQF 721 (850)
Q Consensus 688 s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~ 721 (850)
... + + ....+++.+.++|||||.++++.
T Consensus 131 lDP-~---g--~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---G--TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---S--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---c--CHHHHHHHHHHHhCCCCEEEEEe
Confidence 876 2 1 12568999999999999888865
No 338
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.89 E-value=1.2e-08 Score=116.06 Aligned_cols=57 Identities=11% Similarity=-0.087 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEee---CCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV---NGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~--~i~ad~VV~A~p~~~ 268 (850)
..++..|++.+.+.|++|+.+++|++|..+++.+.|++. +|+ +++||.||+|++++.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 578999999999999999999999999988766777774 565 689999999999885
No 339
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.89 E-value=1.7e-09 Score=113.03 Aligned_cols=86 Identities=28% Similarity=0.434 Sum_probs=74.6
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC---C
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP---E 679 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~---~ 679 (850)
++.+++.+.++++.+|||+|||+|+++..++++ ++++|+|+|+|+++++.|+++++..| ++++++++|+.+++ .
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 356778888899999999999999999999998 46899999999999999999998777 58999999998874 1
Q ss_pred ---CCCccEEEEecc
Q 038410 680 ---VKKYDTIISCEM 691 (850)
Q Consensus 680 ---~~~fD~v~s~~~ 691 (850)
.++||.|++...
T Consensus 93 ~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 93 TLGIEKVDGILMDLG 107 (301)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred hcCCCCCCEEEEcCc
Confidence 158999998653
No 340
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.89 E-value=3.3e-09 Score=121.60 Aligned_cols=38 Identities=29% Similarity=0.536 Sum_probs=36.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHA 39 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (850)
||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 23 dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw 60 (549)
T 4ap3_A 23 DVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW 60 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 79999999999999999999999999999999999943
No 341
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.88 E-value=2.2e-09 Score=113.18 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=82.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcC---CCC----CEEEEEcccCCCC-----CCC
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAG---LQD----HIRLYLCDYRQMP-----EVK 681 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~g---l~~----~v~~~~~D~~~~~-----~~~ 681 (850)
.++.+||+||||.|.++..+++++..+|++||+++++++.|++++...+ +.+ +++++.+|+.+.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3568999999999999999998855799999999999999999865321 332 7999999987643 247
Q ss_pred CccEEEEecch---hhhCh-hhHHHHHHHH----HhccccCeEEEEEEec
Q 038410 682 KYDTIISCEMI---ENVGH-EYIEEFFGCC----ESLLAEHGLLLLQFSS 723 (850)
Q Consensus 682 ~fD~v~s~~~~---~~~~~-~~~~~~~~~~----~r~LkpgG~~~~~~~~ 723 (850)
+||+|++...- ...+. -.-..+++.+ .++|+|||.++++...
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999987532 11110 0224555555 9999999999998654
No 342
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.88 E-value=5.9e-09 Score=113.23 Aligned_cols=55 Identities=9% Similarity=0.012 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.+.+.+++.|++++++++|++|+.++++|. |++.+| ++.||+||+|++...
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 3444556666666999999999999999998898 999888 799999999999653
No 343
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.86 E-value=1e-08 Score=107.43 Aligned_cols=37 Identities=41% Similarity=0.668 Sum_probs=35.0
Q ss_pred cEEEECCChHHHHHHHHHHhC-CCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKA-GVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~-G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|+++ |.+|+|+|++..+||.
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred CEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 899999999999999999997 9999999999888874
No 344
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.85 E-value=1.5e-08 Score=98.36 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=81.5
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEEcccCCC--------------
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGL--QDHIRLYLCDYRQM-------------- 677 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl--~~~v~~~~~D~~~~-------------- 677 (850)
++.++||||||| ..++.+|+..+.+|+.||.+++..+.|+++++++|+ .++|+++.+|+.+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 356799999995 688888875578999999999999999999999998 88999999996542
Q ss_pred -C----------CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 678 -P----------EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 678 -~----------~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+ ..++||+|+.-+-. ...++..+.++|+|||++++..+
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEEeCC
Confidence 1 23689999988632 24667778899999999987554
No 345
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.85 E-value=3.4e-09 Score=114.27 Aligned_cols=41 Identities=34% Similarity=0.537 Sum_probs=36.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEec----CCCCCCcceE
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEK----EDSLGGHAKT 41 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa----~~~~GG~~~s 41 (850)
+||+|||||++||+||+.|+++|++|+|+|+ +..+||.+..
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 4899999999999999999999999999999 4578886553
No 346
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.83 E-value=2.7e-08 Score=112.83 Aligned_cols=55 Identities=16% Similarity=0.191 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|++.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 4677888888888899999999999999988889999999988999999999985
No 347
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.83 E-value=9.8e-09 Score=109.79 Aligned_cols=53 Identities=4% Similarity=0.086 Sum_probs=42.5
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|+++++ ++|++|+.+++.+.|.+.+|.++.+|+||+|++..
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 344455556666889999 99999999988899999998889999999999865
No 348
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.83 E-value=1.6e-08 Score=111.50 Aligned_cols=56 Identities=7% Similarity=-0.039 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEe-eCC--cEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVC-VNG--SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~-~~G--~~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+.+.|++++++++|+.+..+++++. |.. .+| .+++||.||-|.+...
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 4555677777778999999999999999888864 322 233 3588999999998764
No 349
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.83 E-value=1.3e-08 Score=112.92 Aligned_cols=60 Identities=15% Similarity=0.031 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhcc-C-ceEeeCCceEEEEecCCceEEEeeC---C--cEEeCCEEEEecChHHH-HHhh
Q 038410 213 SQIDKVSEQLKSW-G-IQIRMSCEVYSVFPADEGCSIVCVN---G--SQEFYNGCVMAVHAPDA-LRIL 273 (850)
Q Consensus 213 ~l~~~L~~~l~~~-G-~~i~~~~~V~~I~~~~~~v~V~~~~---G--~~i~ad~VV~A~p~~~~-~~ll 273 (850)
.+.+.|.+.+.+. | ++|+++++|++|+. +++|.|++.+ | .+++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 4556666666552 6 48999999999998 7788888765 7 57899999999997643 3444
No 350
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.82 E-value=1.5e-08 Score=115.84 Aligned_cols=56 Identities=18% Similarity=0.068 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCce---EEEeeCCc--EEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC---SIVCVNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v---~V~~~~G~--~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.|++|+.+++|++|..+++++ .+.+.+|+ +++||.||.|++...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 567778888888899999999999999988864 44555674 789999999999864
No 351
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.82 E-value=7.3e-09 Score=111.56 Aligned_cols=53 Identities=8% Similarity=0.088 Sum_probs=44.2
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
+.+.+.+.+.+.+.+++++++|++|+.+++.+.|++.+|+++.+|+||+|++.
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 67 LVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCC
Confidence 34445555666688999999999999987788899988888999999999987
No 352
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.81 E-value=6e-10 Score=123.49 Aligned_cols=56 Identities=13% Similarity=-0.025 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceE---------EEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVY---------SVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~---------~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+++.|++|+.+++|+ +|..++++|.|++.+| ++.||.||+|++++.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 4688999999999999999999999 9988888888877777 699999999999874
No 353
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.81 E-value=1.2e-08 Score=116.14 Aligned_cols=148 Identities=10% Similarity=0.040 Sum_probs=97.4
Q ss_pred cCCChHHHHHhcCCCcc---eeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhc------
Q 038410 567 YDVSNELFSLFLGKSMM---YSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQT------ 637 (850)
Q Consensus 567 Yd~~~~~~~~~l~~~~~---ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~------ 637 (850)
.|...+.|+.++..... -..+.|-.+ ....+.|++.+...++.+|||.+||+|+++..+++..
T Consensus 126 ~d~lG~~YE~ll~~~a~~~~~~~G~fyTP--------~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~ 197 (541)
T 2ar0_A 126 RDDFGDMYEGLLQKNANETKSGAGQYFTP--------RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTND 197 (541)
T ss_dssp ------------------------CCCCC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTT
T ss_pred hhHHHHHHHHHHHHHHHhccccCCeeeCC--------HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcc
Confidence 46667778887764311 112222222 2334567777788889999999999999999888651
Q ss_pred -------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CEEEEEcccCCCC--CCCCccEEEEecchhhhCh-
Q 038410 638 -------------GCKYTGITLSEEQLKYTETKVKEAGLQD----HIRLYLCDYRQMP--EVKKYDTIISCEMIENVGH- 697 (850)
Q Consensus 638 -------------~~~v~gid~s~~~~~~a~~~~~~~gl~~----~v~~~~~D~~~~~--~~~~fD~v~s~~~~~~~~~- 697 (850)
..+++|+|+++.+++.|+.++...|+.. ++.+.++|....+ ..++||+|+++..+.....
T Consensus 198 ~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~ 277 (541)
T 2ar0_A 198 LDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGT 277 (541)
T ss_dssp TTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSC
T ss_pred cccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccch
Confidence 2479999999999999999988888763 2788999976543 3468999999987654321
Q ss_pred -----------hhHHHHHHHHHhccccCeEEEEEEe
Q 038410 698 -----------EYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 698 -----------~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
.....+++.+.+.|||||++.+...
T Consensus 278 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 278 NITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 1124789999999999999988654
No 354
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.81 E-value=6.3e-09 Score=111.79 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCC-ceEEEeeCCcEEeCCEEEEecCh
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADE-GCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
.+.+.+.+.+++.|++++++++|++|+..++ .+.|++.+|+ +.+|+||+|++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 3445566666677899999999999999877 6899998886 999999999987
No 355
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.80 E-value=2.2e-09 Score=109.35 Aligned_cols=107 Identities=11% Similarity=0.144 Sum_probs=79.5
Q ss_pred HHHHHHcCCCCC--CeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCCEEEEEccc
Q 038410 605 SLLIEKARVNKG--LDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEA-------G-LQDHIRLYLCDY 674 (850)
Q Consensus 605 ~~~~~~l~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~-------g-l~~~v~~~~~D~ 674 (850)
+.+.+.++++++ .+|||+|||.|..++.+|++ |++|++||+|+.+++.+++.++.. + +.++++++++|.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 567777888888 99999999999999999998 889999999999887777765533 2 334799999998
Q ss_pred CCC-C-CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCe
Q 038410 675 RQM-P-EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHG 715 (850)
Q Consensus 675 ~~~-~-~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG 715 (850)
.++ + ..++||+|++..++.+-.. ...+++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~~---saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQK---SALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCCC--------HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCccc---chHHHHHHHHHHHhh
Confidence 763 3 2347999999999976432 244555555665543
No 356
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.80 E-value=5.8e-08 Score=112.20 Aligned_cols=56 Identities=11% Similarity=0.095 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecC-Cce-EEEee--CCc--EEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPAD-EGC-SIVCV--NGS--QEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v-~V~~~--~G~--~i~ad~VV~A~p~~ 267 (850)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|... +|+ ++.||.||+|++..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 4688899999999999999999999998876 664 35444 674 58899999999865
No 357
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.80 E-value=6e-09 Score=117.05 Aligned_cols=56 Identities=9% Similarity=0.122 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeC---Cc---EEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN---GS---QEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G~---~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.+..|+++++|++|+..+++|.|++.+ |+ ++.||+||+|++.+.
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 344455555555567899999999999988889888876 76 799999999999753
No 358
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.80 E-value=2e-07 Score=99.77 Aligned_cols=154 Identities=16% Similarity=0.154 Sum_probs=102.2
Q ss_pred CCeEEEEccCccHHHHHHHHh------------------cCCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCC
Q 038410 616 GLDVLEIGCGWGTLAIEIVKQ------------------TGCKYTGITLS-----------EEQLKYTETKVKEAGLQDH 666 (850)
Q Consensus 616 ~~~vLDiGcG~G~~~~~la~~------------------~~~~v~gid~s-----------~~~~~~a~~~~~~~gl~~~ 666 (850)
..+|+|+||++|..+..+... +..+|..-|+. +...+.+++ ..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 578999999999999887654 34688889988 544443322 2232113
Q ss_pred EEEEEcccCCC----CCCCCccEEEEecchhhhChh-------------------------------------hHHHHHH
Q 038410 667 IRLYLCDYRQM----PEVKKYDTIISCEMIENVGHE-------------------------------------YIEEFFG 705 (850)
Q Consensus 667 v~~~~~D~~~~----~~~~~fD~v~s~~~~~~~~~~-------------------------------------~~~~~~~ 705 (850)
--|+.+..... -++++||+|+|+.++||+.+. ++..+++
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35666664432 278999999999999997431 2334488
Q ss_pred HHHhccccCeEEEEEEecCCCC--cCC---CCcC-----------ccccccccccCCCCCCCHHHHHHHHhcCCceEEEE
Q 038410 706 CCESLLAEHGLLLLQFSSVPDQ--CYD---GHRL-----------SPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEH 769 (850)
Q Consensus 706 ~~~r~LkpgG~~~~~~~~~~~~--~~~---~~~~-----------~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 769 (850)
..++.|||||++++......+. ... .... ..+-+..+-.| -+.|+.+++...+++..+|++..
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P-~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVP-IYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCS-BCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCc-ccCCCHHHHHHHHHHcCCceEEE
Confidence 8899999999999998876653 100 0000 00011113334 36799999999888755799988
Q ss_pred eeec
Q 038410 770 LENI 773 (850)
Q Consensus 770 ~~~~ 773 (850)
++.+
T Consensus 289 le~~ 292 (384)
T 2efj_A 289 LETF 292 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 359
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.79 E-value=1.3e-08 Score=114.52 Aligned_cols=54 Identities=9% Similarity=0.163 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+..++++.|++++| ++.||.||+|++.
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 56788899999999999999999999998888888888777 7999999999985
No 360
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.78 E-value=1.1e-08 Score=105.75 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=69.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCE----EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCK----YTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQM 677 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~----v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~ 677 (850)
...+.+++.+++.++++|||||||+|.++..++++ +.+ |+|||+|+++++.++++. .++++++++|+.++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 44578899999999999999999999999999998 445 999999999999999983 34899999999988
Q ss_pred CCCC-------CccEEEEecch
Q 038410 678 PEVK-------KYDTIISCEMI 692 (850)
Q Consensus 678 ~~~~-------~fD~v~s~~~~ 692 (850)
+.+. ..+.|+++-.+
T Consensus 103 ~~~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 103 DFGSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp CGGGGSCSSSSCCEEEEEECCH
T ss_pred ChhHhcccccCCceEEEEccCc
Confidence 7222 23467777544
No 361
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.78 E-value=3.7e-08 Score=110.79 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=46.5
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEee---CCc--EEeCCEEEEecChHHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVCV---NGS--QEFYNGCVMAVHAPDA 269 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~---~G~--~i~ad~VV~A~p~~~~ 269 (850)
.+.+.|.+.+.+.|++|+++++|++|..+++++. |++. +|+ +++||.||.|++....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 5667788888778999999999999999888764 5554 675 7899999999988753
No 362
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.77 E-value=7.4e-08 Score=106.53 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 211 SHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 211 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
...+.+.+.+.+++.|++++++++|++|+.+++++ .|++.+|+++.||.||+|++..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 35678888899999999999999999999887775 6889999999999999999863
No 363
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.77 E-value=9.1e-08 Score=106.23 Aligned_cols=56 Identities=7% Similarity=0.090 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.++++|++|+++++|++|+.+++++ .|++.+|+++.||.||+|++..
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 5678888889999999999999999999887776 7889999999999999999853
No 364
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.77 E-value=9.1e-09 Score=116.02 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=79.9
Q ss_pred CCeEEEEccCccHHHHH---HHHhcC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCC--
Q 038410 616 GLDVLEIGCGWGTLAIE---IVKQTG-----------CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPE-- 679 (850)
Q Consensus 616 ~~~vLDiGcG~G~~~~~---la~~~~-----------~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~-- 679 (850)
+..|||||||+|-++.. +++..+ .+|++||.|+..+...+.+.. +|+.++|+++.+|.+++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 45799999999999643 333222 499999999987766666554 7999999999999999863
Q ss_pred ----CCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEE
Q 038410 680 ----VKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLL 718 (850)
Q Consensus 680 ----~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~ 718 (850)
.++.|+|||-.|=.....+-.+..+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 689999999877443334456778888899999999866
No 365
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.77 E-value=1.3e-08 Score=110.93 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=44.0
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCC-ceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADE-GCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|++++++++|++|+..++ .+.|++.+|+++.||+||+|++..
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 344455556666889999999999998765 689999899889999999999873
No 366
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.77 E-value=2.1e-08 Score=115.37 Aligned_cols=37 Identities=38% Similarity=0.623 Sum_probs=35.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|++.|++|+|+|+++.+||.
T Consensus 18 dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~ 54 (542)
T 1w4x_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV 54 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH
T ss_pred CEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc
Confidence 8999999999999999999999999999999999994
No 367
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.77 E-value=3.4e-08 Score=115.87 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=93.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-------------------------------------------cCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-------------------------------------------TGC 639 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-------------------------------------------~~~ 639 (850)
....++...+.+++.+|||.+||+|.+++.+|.. +..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 3456777788889999999999999999998864 125
Q ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C--CCCccEEEEecchhh-hC-hhhHHHHHHHHHhc---c
Q 038410 640 KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E--VKKYDTIISCEMIEN-VG-HEYIEEFFGCCESL---L 711 (850)
Q Consensus 640 ~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~--~~~fD~v~s~~~~~~-~~-~~~~~~~~~~~~r~---L 711 (850)
+|+|+|+++.+++.|++++..+|+.+.++|.++|+.++. + .++||+|+++..+.. ++ .++...+++.+.+. +
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999988999999999885 2 238999999976532 22 22445555555444 4
Q ss_pred ccCeEEEEEEe
Q 038410 712 AEHGLLLLQFS 722 (850)
Q Consensus 712 kpgG~~~~~~~ 722 (850)
.|||++++.+.
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 58999998643
No 368
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.76 E-value=5.8e-08 Score=111.66 Aligned_cols=56 Identities=14% Similarity=0.092 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc--eEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG--CSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++.|++++.+ +|++|+.++++ +.|++.+|++++||.||.|++.+.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 367788888888889999999 89999986554 578888888899999999999864
No 369
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.76 E-value=2.8e-08 Score=101.32 Aligned_cols=86 Identities=17% Similarity=0.240 Sum_probs=70.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
....+.+++.+.+.++++|||||||+|.++..++++..++|+|||+|+.+++.++++ . ..+++++++|+.+++ +
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChh
Confidence 345678999999999999999999999999999997348999999999999999887 1 248999999999887 2
Q ss_pred C--CCccEEEEecch
Q 038410 680 V--KKYDTIISCEMI 692 (850)
Q Consensus 680 ~--~~fD~v~s~~~~ 692 (850)
+ +.| .|+++..+
T Consensus 92 ~~~~~~-~vv~NlPy 105 (249)
T 3ftd_A 92 SLGKEL-KVVGNLPY 105 (249)
T ss_dssp GSCSSE-EEEEECCT
T ss_pred HccCCc-EEEEECch
Confidence 1 233 66666554
No 370
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.75 E-value=2.6e-08 Score=108.82 Aligned_cols=53 Identities=9% Similarity=-0.002 Sum_probs=43.6
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|++++++++|++|+.+++++.|.+.+| ++.||+||+|++..
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 344455555566999999999999999888899988887 58999999999975
No 371
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.75 E-value=2.6e-08 Score=112.97 Aligned_cols=56 Identities=9% Similarity=0.008 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEec---CCceEEEe--e-CC--cEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPA---DEGCSIVC--V-NG--SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~---~~~v~V~~--~-~G--~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.|++|+++++|++|+.+ ++.+.|++ . +| .+++||.||.|++...
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 45666777777779999999999999975 34577777 3 56 4689999999999764
No 372
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.74 E-value=5.8e-08 Score=109.45 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEE-eeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIV-CVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~-~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|+ +.+|+ +.||.||+|++..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 567888899999999999999999999988666 6888 88997 9999999999853
No 373
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.74 E-value=1.4e-08 Score=116.22 Aligned_cols=37 Identities=32% Similarity=0.704 Sum_probs=35.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|++.|++|+|+|+++.+||.
T Consensus 11 dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt 47 (545)
T 3uox_A 11 DAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT 47 (545)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH
T ss_pred CEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc
Confidence 7999999999999999999999999999999999994
No 374
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.74 E-value=5.2e-08 Score=112.75 Aligned_cols=57 Identities=11% Similarity=0.179 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEe---eCCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVC---VNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+.+.|++|+.+++|++|..+++++ .|.. .+|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4788999999988999999999999999877764 3443 3665 688999999998764
No 375
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.73 E-value=1.6e-08 Score=114.69 Aligned_cols=148 Identities=15% Similarity=0.100 Sum_probs=106.7
Q ss_pred ccCCChHHHHHhcCC---CcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-c----
Q 038410 566 HYDVSNELFSLFLGK---SMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-T---- 637 (850)
Q Consensus 566 ~Yd~~~~~~~~~l~~---~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~---- 637 (850)
..|+..+.|+.++.. .-.-..+.|-++ ....+.|++.+..+++ +|||.+||+|++...+++. .
T Consensus 201 ~~D~lG~~yE~ll~~~a~~~~k~~G~fyTP--------~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~ 271 (544)
T 3khk_A 201 SKDILGHVYEYFLGQFALAEGKQGGQYYTP--------KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHAN 271 (544)
T ss_dssp -CCSHHHHHHHHHHHHHHTTTCCSTTTCCC--------HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhhCccCCeEeCC--------HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhcc
Confidence 357777888877642 101112333233 3455677777777776 9999999999999887653 1
Q ss_pred -----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC--CCCCccEEEEecchhh----------
Q 038410 638 -----------GCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP--EVKKYDTIISCEMIEN---------- 694 (850)
Q Consensus 638 -----------~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~--~~~~fD~v~s~~~~~~---------- 694 (850)
..+++|+|+++.+++.|+.++...|+..++.+.++|....+ ...+||+|+++..+..
T Consensus 272 ~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~ 351 (544)
T 3khk_A 272 VKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLAD 351 (544)
T ss_dssp HHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTT
T ss_pred ccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhh
Confidence 46899999999999999999998998766666888866554 4578999999976653
Q ss_pred ---------------hChh--hHHHHHHHHHhccccCeEEEEEEe
Q 038410 695 ---------------VGHE--YIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 695 ---------------~~~~--~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
++.. .--.+++.+.+.|||||++.+...
T Consensus 352 d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 352 DPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp CGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 1100 012689999999999999888654
No 376
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.73 E-value=8.8e-09 Score=105.05 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=69.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCE--EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCK--YTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP- 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~--v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~- 678 (850)
...+.+++.++++++++|||||||+|.++. ++ + +.+ |+++|+|+++++.+++++... ++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 456788999999999999999999999999 65 4 567 999999999999999876532 38999999999886
Q ss_pred CC-----CCccEEEEecch
Q 038410 679 EV-----KKYDTIISCEMI 692 (850)
Q Consensus 679 ~~-----~~fD~v~s~~~~ 692 (850)
++ +..|.|+++..+
T Consensus 82 ~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHTSCEEEEEECCT
T ss_pred HHhhcccCCceEEEECCCC
Confidence 21 234688888654
No 377
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.73 E-value=1.1e-07 Score=109.94 Aligned_cols=57 Identities=12% Similarity=0.043 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEec-CCce-EEEe---eCCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPA-DEGC-SIVC---VNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v-~V~~---~~G~--~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+.+.|++|+++++|++|..+ ++++ .|.. .+|+ .+.|+.||+|++.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 478888999988889999999999999986 5554 3443 4565 588999999998764
No 378
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.73 E-value=5.3e-08 Score=113.46 Aligned_cols=57 Identities=21% Similarity=0.325 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEe---eCCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVC---VNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+.+.|++|+.+++|++|..+++++ .|.. .+|+ .+.|+.||+|++.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 3688899999888899999999999999877654 3433 4675 489999999998764
No 379
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.72 E-value=4.3e-08 Score=111.62 Aligned_cols=56 Identities=13% Similarity=0.148 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 46778888999999999999999999998877888888888889999999999864
No 380
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.72 E-value=7.7e-08 Score=110.03 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc--eEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG--CSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++.|++++.+ +|++|+.++++ +.|++.+|++++||.||.|++.+.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 367888888888889999999 99999986555 678888898899999999999864
No 381
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.71 E-value=7.3e-08 Score=101.84 Aligned_cols=37 Identities=30% Similarity=0.604 Sum_probs=34.9
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKA--GVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|+++ |++|+|+|++..+||.
T Consensus 81 DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 81 DIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 899999999999999999997 9999999999888874
No 382
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.70 E-value=9.8e-08 Score=109.90 Aligned_cols=56 Identities=16% Similarity=-0.007 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhcc-CceEeeCCceEEEEecCCc--eEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSW-GIQIRMSCEVYSVFPADEG--CSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++. |++++++ +|++|+.++++ +.|++.+|+++.||.||.|++...
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 36888899999888 9999999 99999986555 678888898899999999999864
No 383
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.70 E-value=1e-08 Score=110.95 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=68.1
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCEEEEEcccCCC-C--CCCCccEEE
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEA--GLQDHIRLYLCDYRQM-P--EVKKYDTII 687 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~--gl~~~v~~~~~D~~~~-~--~~~~fD~v~ 687 (850)
+++|.+|||+|||+|..+..+++. +.+|++||+|+++++.|+++++.. |+ ++++++++|+.+. + +.++||+|+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEE
Confidence 346899999999999999999987 889999999999999999999988 88 5899999999885 3 235899999
Q ss_pred Eecch
Q 038410 688 SCEMI 692 (850)
Q Consensus 688 s~~~~ 692 (850)
+....
T Consensus 169 lDPPr 173 (410)
T 3ll7_A 169 VDPAR 173 (410)
T ss_dssp ECCEE
T ss_pred ECCCC
Confidence 97443
No 384
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.69 E-value=2.8e-08 Score=106.17 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEeeC----C--cEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVN----G--SQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~----G--~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.+++++ .|++.+ | +++.||.||+|++..
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 4567778888888999999999999999877664 365554 4 478999999999853
No 385
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.69 E-value=5.2e-08 Score=109.65 Aligned_cols=39 Identities=33% Similarity=0.643 Sum_probs=36.7
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCe---EEEEecCCCCCCcc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAK---AGVE---VVLYEKEDSLGGHA 39 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~---~G~~---V~VlEa~~~~GG~~ 39 (850)
|||+|||||++||+||..|++ .|++ |+|+|+++.+||.+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w 47 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQW 47 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEe
Confidence 589999999999999999999 9999 99999999999954
No 386
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.69 E-value=1.6e-07 Score=107.51 Aligned_cols=55 Identities=9% Similarity=0.057 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhc-cCceEeeCCceEEEEecCCc--eEEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKS-WGIQIRMSCEVYSVFPADEG--CSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++ .|++++.+ .|++|+.++++ +.|++.+|++++||.||.|++.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 677788888887 79999999 69999987655 468888877899999999999864
No 387
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.68 E-value=6.6e-08 Score=109.31 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 211 SHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 211 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
...+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 356788889999999999999999999998888888989999999999999999863
No 388
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.68 E-value=1.6e-07 Score=105.35 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++++++++|++|+.++++ +.|++.+|+++.||.||+|++.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 457788888888889999999999999987655 7888889988999999999985
No 389
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.68 E-value=1.3e-07 Score=108.18 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc----eEEEeeCCc-EEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG----CSIVCVNGS-QEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~----v~V~~~~G~-~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|++.+|+ ++.||.||+|++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 467888899999999999999999999986665 778888887 79999999999853
No 390
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.65 E-value=8.4e-08 Score=110.38 Aligned_cols=58 Identities=14% Similarity=0.062 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeC---C--cEEeCCEEEEecChHH-HHHhh
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN---G--SQEFYNGCVMAVHAPD-ALRIL 273 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G--~~i~ad~VV~A~p~~~-~~~ll 273 (850)
.+.+.|.+.+++. |+++++|++|+.++++|+|++.+ | .+++||.||.|.+.+. +.+.+
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 4556677777654 99999999999999998888765 6 4689999999998874 33444
No 391
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.65 E-value=1.1e-07 Score=109.93 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhccCceEeeCCceEEEEecCC-ce-EEEee------CC---------cEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSWGIQIRMSCEVYSVFPADE-GC-SIVCV------NG---------SQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v-~V~~~------~G---------~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++.|++|+.+++|++|..+++ .+ .|++. +| .+++||.||.|.+...
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 6777888888888999999999999998764 45 47765 33 5799999999999874
No 392
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.65 E-value=9.4e-08 Score=101.61 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=41.3
Q ss_pred HHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 216 DKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 216 ~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+.|++++. ++|++|+.+++++.|++.+|+++.+|+||+|++..
T Consensus 63 ~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 63 QPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 3344445556889987 79999999888888888888889999999999853
No 393
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.63 E-value=1.7e-07 Score=90.83 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=44.4
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|++++++ +|++|+.+++++.|++.+| ++.||.||+|++..
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 4455666777779999999 9999999888899999888 79999999999864
No 394
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.63 E-value=1.4e-07 Score=99.20 Aligned_cols=37 Identities=41% Similarity=0.681 Sum_probs=35.1
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKA--GVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|+++ |++|+|+|+++.+||.
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc
Confidence 899999999999999999998 9999999999998873
No 395
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.63 E-value=2.3e-07 Score=105.66 Aligned_cols=55 Identities=9% Similarity=-0.002 Sum_probs=46.5
Q ss_pred HHHHHHHHHhhc-cCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKS-WGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+.+.|.+.+++ .|++| ++++|++|..+++++ .|.+.+|.++.||.||+|++...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 567778888877 48999 678999999888876 68888998999999999999753
No 396
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.63 E-value=2.5e-07 Score=93.73 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhcc-CceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 213 SQIDKVSEQLKSW-GIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 213 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
.+.+.|.+.+++. |++++ +++|++|..+++++ .|++.+|+++.||.||+|++.+
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 4556677778776 88998 67999999887775 6888888889999999999984
No 397
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.62 E-value=1.3e-07 Score=101.15 Aligned_cols=36 Identities=36% Similarity=0.627 Sum_probs=33.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||+.|++.|++|+|+|++ .+||.
T Consensus 10 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 45 (325)
T 2q7v_A 10 DVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQ 45 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGG
T ss_pred CEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcc
Confidence 8999999999999999999999999999997 67874
No 398
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.61 E-value=1.1e-07 Score=107.23 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=46.1
Q ss_pred HHHHHHHHHHh-hccCceEeeCCceEEEEecCCceEEEee--CC--cEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQL-KSWGIQIRMSCEVYSVFPADEGCSIVCV--NG--SQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l-~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+ ++.|++|+++++|++|+.+++++.|++. +| +++.||.||+|++..
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 45777888888 8899999999999999988777877766 67 578999999999853
No 399
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.61 E-value=9e-08 Score=101.45 Aligned_cols=35 Identities=31% Similarity=0.563 Sum_probs=32.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGG 37 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (850)
||+|||||+|||+||++|+++|++|+|+|+. ..||
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg 42 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRN 42 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCC
Confidence 8999999999999999999999999999984 4555
No 400
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.60 E-value=1.8e-07 Score=105.19 Aligned_cols=56 Identities=20% Similarity=0.228 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 56788888888888999999999999998888888888888889999999999864
No 401
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.60 E-value=1.7e-07 Score=106.43 Aligned_cols=55 Identities=13% Similarity=0.211 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeC---C--cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN---G--SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G--~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+ | +++.||.||+|++.
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 4677888888999999999999999999988887777653 5 57899999999985
No 402
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.60 E-value=1e-07 Score=95.44 Aligned_cols=118 Identities=19% Similarity=0.186 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-C
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-E 679 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~ 679 (850)
.|+..+.++..++++.+|||+|||+|+++.+++++.+ .+|+|+|++..+....... ...|. ++..+..++.... +
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~--~ii~~~~~~dv~~l~ 137 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW--NIITFKDKTDIHRLE 137 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG--GGEEEECSCCTTTSC
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC--CeEEEeccceehhcC
Confidence 4667777777789999999999999999999998744 4789999985431000000 00011 3444555543333 4
Q ss_pred CCCccEEEEecchhhhChhhHH-----HHHHHHHhccccC-eEEEEEEec
Q 038410 680 VKKYDTIISCEMIENVGHEYIE-----EFFGCCESLLAEH-GLLLLQFSS 723 (850)
Q Consensus 680 ~~~fD~v~s~~~~~~~~~~~~~-----~~~~~~~r~Lkpg-G~~~~~~~~ 723 (850)
.++||+|+|..+.. .|....+ ..++.+.++|||| |.|++-.+.
T Consensus 138 ~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 138 PVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 57899999976555 4432222 2468889999999 999995544
No 403
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.59 E-value=4.7e-07 Score=99.33 Aligned_cols=56 Identities=20% Similarity=0.157 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC
Confidence 46778889999999999999999999998878888999999889999999999854
No 404
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.59 E-value=1.9e-07 Score=99.11 Aligned_cols=157 Identities=14% Similarity=0.179 Sum_probs=105.5
Q ss_pred CCeEEEEccCccHHHHHHHHh-----------------cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCC--
Q 038410 616 GLDVLEIGCGWGTLAIEIVKQ-----------------TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQ-- 676 (850)
Q Consensus 616 ~~~vLDiGcG~G~~~~~la~~-----------------~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~-- 676 (850)
..+|+|+||++|..++.+... +..+|+..|+..+....+-+.+.......+.-|..+....
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999887755432 3468999999998888877665321100123455554333
Q ss_pred --CCCCCCccEEEEecchhhhCh-------------------------------hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 677 --MPEVKKYDTIISCEMIENVGH-------------------------------EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 677 --~~~~~~fD~v~s~~~~~~~~~-------------------------------~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+-+++++|+|+|+.++||+.+ +++..+++..++.|+|||++++....
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 227899999999999999743 24667799999999999999999887
Q ss_pred CCCCcC-CC-----CcC-c--------ccc-----ccccccCCCCCCCHHHHHHHHhcCCceEEEEeeec
Q 038410 724 VPDQCY-DG-----HRL-S--------PGF-----ITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENI 773 (850)
Q Consensus 724 ~~~~~~-~~-----~~~-~--------~~~-----~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~ 773 (850)
..+... .. +.. . ... +..+..| .+.|+.+++...+++..+|++..++.+
T Consensus 212 r~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P-~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 212 RRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIP-QYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp CSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCC-CBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred CCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCC-ccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 765321 00 000 0 001 1123334 378999999999987656787776544
No 405
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.59 E-value=2.7e-07 Score=104.37 Aligned_cols=147 Identities=15% Similarity=0.215 Sum_probs=104.9
Q ss_pred CCChHHHHHhcCC---CcceeecccCCCCCCHHHHHHHHHHHHHHHcC----CCCCCeEEEEccCccHHHHHHHHh----
Q 038410 568 DVSNELFSLFLGK---SMMYSCAIFKSEYEDLDVAQMRKVSLLIEKAR----VNKGLDVLEIGCGWGTLAIEIVKQ---- 636 (850)
Q Consensus 568 d~~~~~~~~~l~~---~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~----~~~~~~vLDiGcG~G~~~~~la~~---- 636 (850)
|+..+.|+.++.. ...-+.+.|-+| ....+.|++.+. ..++.+|||.+||+|++...+++.
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP--------~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~ 246 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTP--------QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQP 246 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCC--------HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCT
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeeccc--------HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhc
Confidence 5666777777642 111122333333 233445555554 457889999999999999998876
Q ss_pred cCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEEcccCCC--C--CCCCccEEEEecchhhh----------------
Q 038410 637 TGCKYTGITLSEEQLKYTETKVKEAGLQ-DHIRLYLCDYRQM--P--EVKKYDTIISCEMIENV---------------- 695 (850)
Q Consensus 637 ~~~~v~gid~s~~~~~~a~~~~~~~gl~-~~v~~~~~D~~~~--~--~~~~fD~v~s~~~~~~~---------------- 695 (850)
...+++|+|+++.+++.|+.++...|+. +++.+.++|.... + ...+||+|+++..+..-
T Consensus 247 ~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~ 326 (542)
T 3lkd_A 247 QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPF 326 (542)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGG
T ss_pred cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhh
Confidence 2579999999999999999999888885 4789999997765 3 45789999999655311
Q ss_pred C---h-h-hHHHHHHHHHhccc-cCeEEEEEEe
Q 038410 696 G---H-E-YIEEFFGCCESLLA-EHGLLLLQFS 722 (850)
Q Consensus 696 ~---~-~-~~~~~~~~~~r~Lk-pgG~~~~~~~ 722 (850)
+ . . .--.+++.+.+.|| |||++.+...
T Consensus 327 G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 327 GKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred hhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 0 0 0 01248999999999 9999988554
No 406
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.59 E-value=1.1e-07 Score=107.93 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|++.+|+++.||.||+|++..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 467888889999999999999999999987654 78888899889999999999853
No 407
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.59 E-value=1.6e-07 Score=107.40 Aligned_cols=35 Identities=34% Similarity=0.479 Sum_probs=32.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGG 37 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (850)
||+|||||++||+||+.|++ |.+|+|||+....||
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 89999999999999999999 999999999887776
No 408
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.58 E-value=1.1e-07 Score=100.27 Aligned_cols=51 Identities=12% Similarity=0.078 Sum_probs=39.9
Q ss_pred HHHHHHhhcc-CceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 216 DKVSEQLKSW-GIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 216 ~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+. +++++ +++|++|+.+++++.|++.+|+++.+|+||+|++..
T Consensus 60 ~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 60 AEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 3344445444 45654 569999999988899999999889999999999864
No 409
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.58 E-value=2.2e-07 Score=104.62 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCc-EEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGS-QEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|++..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 457778888898999999999999999987777889899998 89999999999853
No 410
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.58 E-value=3.1e-07 Score=101.64 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.++....|++.+|+++.||.||+|++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 35677788888888999999999999998765468999999999999999999864
No 411
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.57 E-value=3.3e-07 Score=104.77 Aligned_cols=55 Identities=15% Similarity=0.053 Sum_probs=46.3
Q ss_pred HHHHHHHHHhhc-cCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKS-WGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++ .|++| ++++|+.|..+++++ .|++.+|.++.||.||+|++.+.
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 567778888877 58999 678999999888776 78888898899999999999753
No 412
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.57 E-value=1.3e-07 Score=110.12 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++ .|++.+|+++.||.||+|++..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCC
Confidence 56788888999999999999999999987655 4667788899999999999853
No 413
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.56 E-value=7.6e-08 Score=103.43 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=42.0
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+++.|++++.++ |++|+..++.+.|++ +|+++.+|+||+|++..
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 33445555556689999987 999999888888888 78889999999999875
No 414
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.56 E-value=7e-07 Score=100.99 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCC---cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNG---SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G---~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++++++++|++|+.+++++.|++.++ +++.+|.||+|++.
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 46788888899999999999999999999888888877765 57899999999985
No 415
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.56 E-value=3.5e-07 Score=105.87 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhccC-ceEeeCCceEEEEecCCce-EEE---eeCCc--EEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWG-IQIRMSCEVYSVFPADEGC-SIV---CVNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G-~~i~~~~~V~~I~~~~~~v-~V~---~~~G~--~i~ad~VV~A~p~~~ 268 (850)
..+...|.+.+.+.| ++|+.+++|++|..+++++ .|. +.+|+ .+.|+.||+|++.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 368888999998888 9999999999999887764 332 25676 689999999998764
No 416
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.56 E-value=7.7e-08 Score=113.86 Aligned_cols=40 Identities=45% Similarity=0.636 Sum_probs=37.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcce
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAK 40 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (850)
+||+|||||++||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 5899999999999999999999999999999999999654
No 417
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.56 E-value=8.2e-08 Score=108.63 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc--eEEEeeCC-cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG--CSIVCVNG-SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G-~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|++.+| +++.||.||+|++.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 467778888898899999999999999987555 78888899 78999999999985
No 418
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.55 E-value=2.1e-07 Score=99.26 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=38.6
Q ss_pred HHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 217 KVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 217 ~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
.+.+.+++.|++++. ++|++|+.+++.+.|.+ +|.++.+|+||+|++..
T Consensus 77 ~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 77 LFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCC
Confidence 344455556888887 79999998888788877 56679999999999864
No 419
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.54 E-value=2.5e-07 Score=98.27 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=41.1
Q ss_pred HHHHHhhccCceEeeCCceEEEEecC---CceEEEeeCCcEEeCCEEEEecChH
Q 038410 217 KVSEQLKSWGIQIRMSCEVYSVFPAD---EGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 217 ~L~~~l~~~G~~i~~~~~V~~I~~~~---~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
.+.+.+++.|++++.+++|+.|+.+. +.+.|++.+|+++.+|+||+|++..
T Consensus 61 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 34444555689999999999998753 3688999889889999999999864
No 420
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.54 E-value=1.4e-07 Score=107.10 Aligned_cols=55 Identities=20% Similarity=0.202 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.++++|++|+++++|++|+.++++ +.|++.+|+++.||.||+|++.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 467788889999999999999999999987654 7888889988999999999985
No 421
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=1.9e-07 Score=105.53 Aligned_cols=56 Identities=11% Similarity=0.187 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEee---CC--cEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV---NG--SQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G--~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++. +| +++.+|.||+|++..
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 467788888999999999999999999987777777764 45 679999999999853
No 422
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.54 E-value=3.4e-08 Score=105.13 Aligned_cols=39 Identities=36% Similarity=0.694 Sum_probs=35.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEE-EecCCCCCCcce
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVL-YEKEDSLGGHAK 40 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~V-lEa~~~~GG~~~ 40 (850)
+||+|||||++||+||+.|+++|++|+| +|+ +.+||.+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 4899999999999999999999999999 999 78898653
No 423
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.54 E-value=2.1e-07 Score=109.08 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhccCc--eEeeCCceEEEEecCC----ceEEEee------CC--cEEeCCEEEEecChHH-HHHhhc
Q 038410 213 SQIDKVSEQLKSWGI--QIRMSCEVYSVFPADE----GCSIVCV------NG--SQEFYNGCVMAVHAPD-ALRILG 274 (850)
Q Consensus 213 ~l~~~L~~~l~~~G~--~i~~~~~V~~I~~~~~----~v~V~~~------~G--~~i~ad~VV~A~p~~~-~~~ll~ 274 (850)
.+.+.|.+.+++.|+ +|+++++|++|+.+++ +|+|++. +| ++++||.||.|.+.+. +.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 577778888888887 9999999999998763 5777665 46 4789999999999875 344554
No 424
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.54 E-value=2.9e-07 Score=103.84 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++.+.|++. +.++.||.||+|++..
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 467888899999999999999999999987776777776 4579999999999864
No 425
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.53 E-value=3.2e-07 Score=103.34 Aligned_cols=55 Identities=16% Similarity=0.030 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCce-EEEe--eCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVC--VNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~--~~G~~i~ad~VV~A~p~~~ 268 (850)
..+.+.|.+.+++.|++|+.+++| +|..+++++ .|.. .+| ++.||.||+|++...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 367788888887789999999999 998877765 3333 344 578999999998764
No 426
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.52 E-value=3.4e-07 Score=103.29 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=40.8
Q ss_pred HHHHHHHHhhccCceEeeCCceEEEEec---CCc--eEEEeeCCc----EEeCCEEEEecCh
Q 038410 214 QIDKVSEQLKSWGIQIRMSCEVYSVFPA---DEG--CSIVCVNGS----QEFYNGCVMAVHA 266 (850)
Q Consensus 214 l~~~L~~~l~~~G~~i~~~~~V~~I~~~---~~~--v~V~~~~G~----~i~ad~VV~A~p~ 266 (850)
+.+.+...+++.+.+|+++++|++|+.. ++. +.|++.+|+ ++.||+||+|++.
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 4444555555558899999999999987 433 478887775 7999999999996
No 427
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.50 E-value=2.7e-07 Score=104.33 Aligned_cols=56 Identities=7% Similarity=0.105 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEe-----eCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVC-----VNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~-----~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|++ .+++++.||.||+|++..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 467788888999999999999999999988766 77763 466789999999999853
No 428
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.50 E-value=3.5e-07 Score=105.97 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEe-------------------cCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFP-------------------ADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~-------------------~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|+++++++.|++|+. .++++.+++.+|+++.||.||+|++..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCc
Confidence 46777888889899999999999999987 466788888899899999999999853
No 429
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=1.1e-06 Score=99.94 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc-eEEEeeCCcE-EeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG-CSIVCVNGSQ-EFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~-i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.++++ +.|++.+|++ +.||.||+|++..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 567888899999999999999999999986544 7888889987 9999999999853
No 430
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.48 E-value=2.5e-07 Score=102.47 Aligned_cols=51 Identities=12% Similarity=0.077 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++++++++|++|+.+ + |++++|+++.||.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCC
Confidence 467888889999999999999999999753 2 77789999999999999875
No 431
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.47 E-value=3.5e-07 Score=93.25 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=83.5
Q ss_pred cccCCCCCCHHHHHHHHHHH--HHHHcC--CCCCCeEEEEccCccHHHHHHHHh--------cC-----CEEEEEeCCH-
Q 038410 587 AIFKSEYEDLDVAQMRKVSL--LIEKAR--VNKGLDVLEIGCGWGTLAIEIVKQ--------TG-----CKYTGITLSE- 648 (850)
Q Consensus 587 ~~~~~~~~~l~~aq~~~~~~--~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~--------~~-----~~v~gid~s~- 648 (850)
.|++. ...++++....++. +-.... .+++.+|||||||+|..+..+++. +. .+++++|..+
T Consensus 29 ~y~s~-~~~l~E~~~vF~~~~~lp~r~~~~~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~ 107 (257)
T 2qy6_A 29 VYFSN-DNGLEETRYVFLGGNQLEARFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 107 (257)
T ss_dssp ESSCT-TTHHHHHHHHHHHHTTHHHHGGGCSSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred cccCC-CCHHHHHHHHHHhccchHHHHHhcCCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcC
Confidence 34443 33467666553321 112222 345679999999999998876542 22 5899999776
Q ss_pred --HHHH-----------HHHHHHHHc----------CCC---CCEEEEEcccCC-CC-CC----CCccEEEEecchhh-h
Q 038410 649 --EQLK-----------YTETKVKEA----------GLQ---DHIRLYLCDYRQ-MP-EV----KKYDTIISCEMIEN-V 695 (850)
Q Consensus 649 --~~~~-----------~a~~~~~~~----------gl~---~~v~~~~~D~~~-~~-~~----~~fD~v~s~~~~~~-~ 695 (850)
+.++ .|++.++.. .+. .+++++.+|+.+ ++ .+ ..||+|+.-..-.. .
T Consensus 108 ~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~ 187 (257)
T 2qy6_A 108 TRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKN 187 (257)
T ss_dssp CHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTC
T ss_pred CHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccC
Confidence 4444 566665531 121 367899999877 33 22 27999998642111 1
Q ss_pred ChhhHHHHHHHHHhccccCeEEEE
Q 038410 696 GHEYIEEFFGCCESLLAEHGLLLL 719 (850)
Q Consensus 696 ~~~~~~~~~~~~~r~LkpgG~~~~ 719 (850)
++-..+.+|+.+.++|||||+++.
T Consensus 188 p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 188 PDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp GGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcCHHHHHHHHHHcCCCcEEEE
Confidence 111246899999999999999884
No 432
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.47 E-value=5e-07 Score=92.79 Aligned_cols=109 Identities=19% Similarity=0.312 Sum_probs=85.4
Q ss_pred CCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHc--C-C-CCCEEEEEcccCCCC--CCCCccEE
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEA--G-L-QDHIRLYLCDYRQMP--EVKKYDTI 686 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--g-l-~~~v~~~~~D~~~~~--~~~~fD~v 686 (850)
+...+||-||.|.|+.++.+++. +..+|+.|||+++.++.+++.+... + + ..+++++.+|....- ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 44579999999999999999998 4569999999999999999986531 2 1 358999999988765 55789999
Q ss_pred EEecchhhhChh---hHHHHHHHHHhccccCeEEEEEEec
Q 038410 687 ISCEMIENVGHE---YIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 687 ~s~~~~~~~~~~---~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+.-..= -.+.. .-..+++.+++.|+|||.++.+.-+
T Consensus 162 i~D~~d-p~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCC-CCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCC-cCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 975321 11110 1257999999999999999998644
No 433
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.46 E-value=1.1e-07 Score=108.00 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=40.3
Q ss_pred HHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 220 EQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 220 ~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.++++|++|++++.|++|+.+++...|++.+|+++.||.||+|++..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 556667999999999999987654456778889899999999999864
No 434
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.46 E-value=1.1e-06 Score=98.64 Aligned_cols=55 Identities=9% Similarity=0.162 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceE-EEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCS-IVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++|+++++|++|+.+++++. |.+ +|+++.||.||+|++..
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 46788888999999999999999999997666665 544 78889999999999853
No 435
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.45 E-value=7.7e-07 Score=101.77 Aligned_cols=55 Identities=11% Similarity=-0.011 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhcc-CceEeeCCceEEEEecCCceE-EEeeCCcEEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSW-GIQIRMSCEVYSVFPADEGCS-IVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++. |++|+ +..|+.|..+++++. |.+.+|+++.||.||+|++.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4666777777764 88985 669999998888875 8888998999999999999763
No 436
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.44 E-value=8.3e-07 Score=100.93 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEe-----cCChHHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCE
Q 038410 185 SAFSVLSFCRLFQLFGHPQCVTV-----RRHSHSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNG 259 (850)
Q Consensus 185 ~a~~~~~~~~~~~~~~~~~~~~~-----~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~ 259 (850)
.....+++...+..++....... ++--..+.+.+.+.+++.|+++++++.|++++..++++.|++.++.++.+|.
T Consensus 231 gG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~ 310 (542)
T 4b1b_A 231 ASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDT 310 (542)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred CCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEE
Confidence 34455666666666655443322 2333678889999999999999999999999999999999999998899999
Q ss_pred EEEecCh
Q 038410 260 CVMAVHA 266 (850)
Q Consensus 260 VV~A~p~ 266 (850)
|++|++-
T Consensus 311 vLvAvGR 317 (542)
T 4b1b_A 311 VLYAIGR 317 (542)
T ss_dssp EEECSCE
T ss_pred EEEcccc
Confidence 9999973
No 437
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.44 E-value=8.7e-07 Score=99.83 Aligned_cols=56 Identities=14% Similarity=0.211 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEee-CC--cEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV-NG--SQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~G--~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+.+++++.|++. +| +++.||.||+|++..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 467777888888889999999999999987777777765 66 578999999999853
No 438
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.42 E-value=6.6e-07 Score=101.47 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecC-CceEEEeeC---Cc--EEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPAD-EGCSIVCVN---GS--QEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v~V~~~~---G~--~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|+++++++.|++|+..+ +.+.|++.+ |+ ++.||.||+|++.
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 5678888899999999999999999998854 446676654 54 4789999999984
No 439
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.41 E-value=1e-06 Score=99.63 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCc--eEEEeeC---C----cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEG--CSIVCVN---G----SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~---G----~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+..+++ +.|++.+ | +++.+|.||+|++.
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 567788888899999999999999999987665 6777765 2 57899999999985
No 440
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.40 E-value=5.5e-07 Score=102.09 Aligned_cols=54 Identities=9% Similarity=0.160 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEee--CC--cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV--NG--SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++. ++|+++++|++|+.+++++.|++. +| +++.||.||+|++.
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 56778888888877 999999999999998888888775 67 67899999999985
No 441
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.40 E-value=5e-07 Score=103.13 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=42.0
Q ss_pred HHHHHHhhccCceEeeCCceEEEEec---CCceEEEeeCCcEEeCCEEEEecChH
Q 038410 216 DKVSEQLKSWGIQIRMSCEVYSVFPA---DEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 216 ~~L~~~l~~~G~~i~~~~~V~~I~~~---~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.+.|++++.+++|++|..+ ++.+.|++.+|+++.+|+||+|++..
T Consensus 271 ~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 271 GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 34555556669999999999999864 33688999899889999999999864
No 442
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.40 E-value=2.5e-06 Score=94.94 Aligned_cols=56 Identities=11% Similarity=0.142 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEe--cCCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFP--ADEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~--~~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++.|++++++++|++|+. +++++ .|++.+|+++.||.||+|++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 46777888888889999999999999997 55665 7888899899999999999853
No 443
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.38 E-value=1.9e-06 Score=97.61 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCC-ceEEEeeCCc-----EEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADE-GCSIVCVNGS-----QEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~-----~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++|+++++|++|+..++ .+.|++.++. ++.||.||+|++.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 56778888999999999999999999998655 4777776654 7899999999985
No 444
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.38 E-value=6e-07 Score=98.19 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=35.5
Q ss_pred ccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 224 SWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 224 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
+.|++++++++|++|+.++. .|++.+|+++.+|+||+||+.
T Consensus 74 ~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 34889999999999998765 567788989999999999986
No 445
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.38 E-value=1.3e-07 Score=94.91 Aligned_cols=117 Identities=18% Similarity=0.178 Sum_probs=78.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEc--ccCCCC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLC--DYRQMP 678 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~--D~~~~~ 678 (850)
-|+..|.++..++++++|||+|||.|+++.+++++.+ ..|+|+|++..+...+... ...+ .++..... |..+++
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l~ 153 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNME 153 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGSC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhcC
Confidence 4567777777889999999999999999999997634 4799999987642222110 0011 13333332 444443
Q ss_pred CCCCccEEEEecchhhhChhhHH-----HHHHHHHhccccC--eEEEEEEec
Q 038410 679 EVKKYDTIISCEMIENVGHEYIE-----EFFGCCESLLAEH--GLLLLQFSS 723 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~~~-----~~~~~~~r~Lkpg--G~~~~~~~~ 723 (850)
.+++|+|+|-.+.. .|....+ ..++-+.++|||| |.|++-.+.
T Consensus 154 -~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 -VIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 47899999986655 4432221 3477778999999 999996654
No 446
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2.1e-07 Score=99.60 Aligned_cols=40 Identities=38% Similarity=0.604 Sum_probs=36.4
Q ss_pred CcEEEECCChHHHHHHHHHHh--CCCeEEEEecCCCCCCcce
Q 038410 1 MRVAVIGGGMSGLVSAYVLAK--AGVEVVLYEKEDSLGGHAK 40 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~--~G~~V~VlEa~~~~GG~~~ 40 (850)
.||+|||||+|||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 389999999999999999975 5999999999999999754
No 447
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.35 E-value=1.1e-06 Score=94.50 Aligned_cols=48 Identities=25% Similarity=0.268 Sum_probs=38.0
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCceEE-EeeCCcEEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGCSI-VCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V-~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+.+.|++++.++ |++|+. ++.+.| .+.+|+++.+|+||+|++..
T Consensus 77 l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 77 MREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCC
Confidence 3344445588999987 999988 566788 78888889999999999863
No 448
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.34 E-value=2.7e-06 Score=95.85 Aligned_cols=37 Identities=41% Similarity=0.639 Sum_probs=35.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
||+|||||++||+||..|++.|++|+|+|+++.+||.
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN 42 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 8999999999999999999999999999998999984
No 449
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.34 E-value=2e-06 Score=91.63 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=95.3
Q ss_pred HHHHHcCCCCCCeEEEEccCccHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CCEEEEEcccCCCC-
Q 038410 606 LLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYTETKVKEAGLQ-----DHIRLYLCDYRQMP- 678 (850)
Q Consensus 606 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~gl~-----~~v~~~~~D~~~~~- 678 (850)
.....|+++||++|||+.+|.|+=+.++++. .+.+|+++|+|+.-++..++++++.+.. .++.+...|.+.++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 4556678999999999999999999999987 3458999999999999999999887653 47899999988875
Q ss_pred -CCCCccEEEEe----c----chhh-------hCh-------hhHHHHHHHHHhccccCeEEEEEEecCCC
Q 038410 679 -EVKKYDTIISC----E----MIEN-------VGH-------EYIEEFFGCCESLLAEHGLLLLQFSSVPD 726 (850)
Q Consensus 679 -~~~~fD~v~s~----~----~~~~-------~~~-------~~~~~~~~~~~r~LkpgG~~~~~~~~~~~ 726 (850)
..+.||.|+.- + ++.. ... .....+++...++|||||+++-.+.+...
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 45789999953 2 1110 000 11246788999999999999998887654
No 450
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.33 E-value=3.1e-07 Score=103.98 Aligned_cols=38 Identities=37% Similarity=0.690 Sum_probs=35.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
+||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 44 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGV 44 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCc
Confidence 38999999999999999999999999999998888884
No 451
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.32 E-value=4.6e-06 Score=97.47 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhcc-Cc-eEeeCCceEEEEecCC---ce-EEEe---eCCc--EEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSW-GI-QIRMSCEVYSVFPADE---GC-SIVC---VNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~-G~-~i~~~~~V~~I~~~~~---~v-~V~~---~~G~--~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++. |+ +|+.+++|++|..+++ ++ .|.. .+|+ .+.|+.||+|++...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4666777777776 99 9999999999998776 65 3332 4565 588999999998754
No 452
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.31 E-value=9.8e-07 Score=89.12 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=71.8
Q ss_pred HHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-----
Q 038410 604 VSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP----- 678 (850)
Q Consensus 604 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~----- 678 (850)
++.+++.+.++++..+||.+||.|+.+..++++ +++|+|+|.++++++.|++ ++. ++++++++|+.++.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 457888889999999999999999999999998 8899999999999999998 543 48999999999875
Q ss_pred -CCCCccEEEEecch
Q 038410 679 -EVKKYDTIISCEMI 692 (850)
Q Consensus 679 -~~~~fD~v~s~~~~ 692 (850)
..++||.|++.-.+
T Consensus 85 ~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 85 LGVERVDGILADLGV 99 (285)
T ss_dssp TTCSCEEEEEEECSC
T ss_pred cCCCCcCEEEeCCcc
Confidence 22579999986443
No 453
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.30 E-value=1.6e-06 Score=89.05 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHcC-CCCCCeEEEEccCccHHHHHHHHh------cCCEEEEEeCCHH---------------------
Q 038410 598 VAQMRKVSLLIEKAR-VNKGLDVLEIGCGWGTLAIEIVKQ------TGCKYTGITLSEE--------------------- 649 (850)
Q Consensus 598 ~aq~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~------~~~~v~gid~s~~--------------------- 649 (850)
..+...+..+++.+. .....+||||||..|..++.+++. ++.+|+++|..+.
T Consensus 88 ~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~ 167 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRN 167 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccccc
Confidence 334555566666543 233459999999999999988765 2679999996421
Q ss_pred -----HHHHHHHHHHHcCCC-CCEEEEEcccCC-CC--CCCCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEE
Q 038410 650 -----QLKYTETKVKEAGLQ-DHIRLYLCDYRQ-MP--EVKKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQ 720 (850)
Q Consensus 650 -----~~~~a~~~~~~~gl~-~~v~~~~~D~~~-~~--~~~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~ 720 (850)
.++.+++++++.|+. ++|+++.+|+.+ ++ +.++||+|+.-.-.. +....+++.+...|+|||.+++.
T Consensus 168 ~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 168 SVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp HHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEES
T ss_pred ccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEc
Confidence 467789999999994 899999999865 33 346899999876421 23568899999999999999996
Q ss_pred Ee
Q 038410 721 FS 722 (850)
Q Consensus 721 ~~ 722 (850)
++
T Consensus 244 D~ 245 (282)
T 2wk1_A 244 DY 245 (282)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 454
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.29 E-value=3.3e-06 Score=96.92 Aligned_cols=111 Identities=8% Similarity=0.012 Sum_probs=79.7
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhc----CCEEEEEeCCHHHHHHHH--HHHHHcCCCC---CEEEEEcccCCCC--CCC
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQT----GCKYTGITLSEEQLKYTE--TKVKEAGLQD---HIRLYLCDYRQMP--EVK 681 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~----~~~v~gid~s~~~~~~a~--~~~~~~gl~~---~v~~~~~D~~~~~--~~~ 681 (850)
.+++.+|||.|||+|.++..++++. ..+++|+|+++.+++.|+ .++..+++.. ...+...|+.+.. ..+
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC
Confidence 3568899999999999999999873 258999999999999994 3333212211 2356666766643 447
Q ss_pred CccEEEEecchhh-hCh--------------------------hhHHHHHHHHHhccccCeEEEEEEec
Q 038410 682 KYDTIISCEMIEN-VGH--------------------------EYIEEFFGCCESLLAEHGLLLLQFSS 723 (850)
Q Consensus 682 ~fD~v~s~~~~~~-~~~--------------------------~~~~~~~~~~~r~LkpgG~~~~~~~~ 723 (850)
+||+|+++..+.. ... .-...+++.+.++|||||++.+....
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 8999999987621 000 01345788999999999999986543
No 455
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=1.3e-06 Score=98.06 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=34.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
+||+|||||++|++||..|++.|++|+|+|++ .+||.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~ 40 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGV 40 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCc
Confidence 58999999999999999999999999999997 78884
No 456
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=1.1e-05 Score=90.25 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
..+.+.+.+.+++. +++++++.|++|+.++ ++.+...+|+++.||.||+|++..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCc
Confidence 46777888888888 9999999999998765 554445677889999999999853
No 457
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.26 E-value=3e-06 Score=99.35 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=44.7
Q ss_pred cEEEECCChHHHHHHHHHHh-----CCCeEEEEecCCCCCCcceEEeeCCeeeecceeeccCCCchHHHHHHHHcCCCcc
Q 038410 2 RVAVIGGGMSGLVSAYVLAK-----AGVEVVLYEKEDSLGGHAKTVTIDGVDLDIGFMLFNHVEYPNMMEFLESLGVDMG 76 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-----~G~~V~VlEa~~~~GG~~~s~~~~G~~~d~G~~~~~~~~~~~~~~l~~~lgl~~~ 76 (850)
||+|||||++||++|..|++ .|++|+|+|++....- .| .+. ...+...++++++|+...
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~-------~g-----ra~----~l~~~tle~l~~lGl~~~ 73 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY-------NG-----QAD----GLQCRTLESLKNLGLADK 73 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC-------SC-----SCC----EECHHHHHHHHTTTCHHH
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC-------CC-----cee----EEChHHHHHHHHCCCHHH
Confidence 79999999999999999999 9999999999754321 01 011 124567888999987543
No 458
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.26 E-value=1.4e-06 Score=96.13 Aligned_cols=47 Identities=9% Similarity=-0.157 Sum_probs=41.6
Q ss_pred HHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 220 EQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 220 ~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
+.+++.|+++++++.|+.++.+++...|++.+|+++.||.||+++|.
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred HHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 34567799999999999999988888999999999999999998874
No 459
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.22 E-value=2.2e-06 Score=96.05 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=33.1
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKA--GVEVVLYEKEDSLG 36 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~G 36 (850)
|||+|||||++|++||..|++. |++|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 7999999999999999999998 99999999976644
No 460
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.21 E-value=1.7e-06 Score=100.81 Aligned_cols=56 Identities=16% Similarity=-0.059 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcc--CceEeeCCceEEEEecCC---ce-EEEe---eCCc--EEeCCEEEEecChHH
Q 038410 213 SQIDKVSEQLKSW--GIQIRMSCEVYSVFPADE---GC-SIVC---VNGS--QEFYNGCVMAVHAPD 268 (850)
Q Consensus 213 ~l~~~L~~~l~~~--G~~i~~~~~V~~I~~~~~---~v-~V~~---~~G~--~i~ad~VV~A~p~~~ 268 (850)
.+...|.+.+++. |++|+.++.|++|..+++ ++ .|.. .+|+ .+.|+.||+||+...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5777788888777 999999999999998876 54 3432 3454 588999999998653
No 461
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.19 E-value=2.6e-06 Score=96.22 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=35.4
Q ss_pred CceEeeCCceEEEEecCCceEEEe-eCCc--EEeCCEEEEecChH
Q 038410 226 GIQIRMSCEVYSVFPADEGCSIVC-VNGS--QEFYNGCVMAVHAP 267 (850)
Q Consensus 226 G~~i~~~~~V~~I~~~~~~v~V~~-~~G~--~i~ad~VV~A~p~~ 267 (850)
|++++++++|+.|+.+++.+.+.. .+|+ ++.+|+||+|++..
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 789999999999998887777765 4576 78999999999853
No 462
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.19 E-value=2.7e-06 Score=84.93 Aligned_cols=119 Identities=17% Similarity=0.182 Sum_probs=83.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEc-ccCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLC-DYRQMP 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~-D~~~~~ 678 (850)
..|+..+.++..++++++||||||++|+++.+++...++ +|+|+|+-..-.+.=+ ..+..+.. .|.+... |++.++
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~-lV~~~~~~Dv~~l~ 157 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWN-IVTMKSGVDVFYRP 157 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGG-GEEEECSCCTTSSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCc-ceEEEeccCHhhCC
Confidence 346678888878899999999999999999999988666 5999999876210000 00011221 4888887 988887
Q ss_pred CCCCccEEEEecchhhhChhh-----HHHHHHHHHhccccC-eEEEEEEec
Q 038410 679 EVKKYDTIISCEMIENVGHEY-----IEEFFGCCESLLAEH-GLLLLQFSS 723 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~~-----~~~~~~~~~r~Lkpg-G~~~~~~~~ 723 (850)
+ .++|.|+|--. +.-|... --..++-+.+.|++| |-+++-.+.
T Consensus 158 ~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 158 S-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp C-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred C-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 6 56999998644 4433321 122677778999999 888885543
No 463
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.18 E-value=2.5e-06 Score=97.32 Aligned_cols=32 Identities=31% Similarity=0.498 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKED 33 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~ 33 (850)
||+|||||++||+||..|++.|++|+|+|+++
T Consensus 34 DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 34 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 89999999999999999999999999999954
No 464
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.13 E-value=1.5e-06 Score=97.09 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=35.3
Q ss_pred HHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 220 EQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 220 ~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+++.|++++ ..+|++|+.+++ .|++++|+++.+|+||+|++..
T Consensus 67 ~~~~~~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 67 HYVERKGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp HHHHTTTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCE
T ss_pred HHHHHCCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCC
Confidence 33444588886 579999987765 6777888889999999999864
No 465
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.12 E-value=2.9e-06 Score=75.94 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCcc-HHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCCCC-
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWG-TLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEV- 680 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G-~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~~~- 680 (850)
..+.+.+.. +++.+|||||||.| ..+.+|+++.|++|+++|+++..++ +++.|+.+...+
T Consensus 25 LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~ 86 (153)
T 2k4m_A 25 LAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEI 86 (153)
T ss_dssp HHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHH
T ss_pred HHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcccc
Confidence 344455553 56679999999999 6999999855999999999997655 788888774422
Q ss_pred -CCccEEEEecchhhhChhhHHHHHHHHHhccccCeEEEEEEecC
Q 038410 681 -KKYDTIISCEMIENVGHEYIEEFFGCCESLLAEHGLLLLQFSSV 724 (850)
Q Consensus 681 -~~fD~v~s~~~~~~~~~~~~~~~~~~~~r~LkpgG~~~~~~~~~ 724 (850)
+.||+|.++.. | .++...+-++.+. -|.-++|...+.
T Consensus 87 Y~~~DLIYsirP----P-~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 87 YRGAALIYSIRP----P-AEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp HTTEEEEEEESC----C-TTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred cCCcCEEEEcCC----C-HHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 48999998854 2 2244555555543 366777765543
No 466
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.11 E-value=1.6e-06 Score=92.09 Aligned_cols=37 Identities=30% Similarity=0.589 Sum_probs=34.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcc
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHA 39 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (850)
||+|||||+|||+||.+|++.|++|+|+|+ +.+||.|
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQM 44 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCee
Confidence 899999999999999999999999999998 6788854
No 467
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.10 E-value=1.1e-06 Score=95.11 Aligned_cols=45 Identities=16% Similarity=0.055 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChHH
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAPD 268 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~~ 268 (850)
..++.+|.+.+++.|++|+. ++|++|+..+ .++||.||+|++++.
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcCh
Confidence 47889999999999999988 9999886432 167999999999886
No 468
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.09 E-value=3.3e-06 Score=89.43 Aligned_cols=109 Identities=21% Similarity=0.260 Sum_probs=81.8
Q ss_pred CCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHc--C-C----CCCEEEEEcccCCCC-----CCC
Q 038410 614 NKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEA--G-L----QDHIRLYLCDYRQMP-----EVK 681 (850)
Q Consensus 614 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~--g-l----~~~v~~~~~D~~~~~-----~~~ 681 (850)
.+..+||-||.|.|+.++.+.+.+..+|+.|||+++.++.+++..... + + .++++++..|..+.- ..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 456899999999999999999886689999999999999999875321 1 1 136899999976532 236
Q ss_pred CccEEEEecch-------hhhC-hhhHHHHHHHHHhccccCeEEEEEEe
Q 038410 682 KYDTIISCEMI-------ENVG-HEYIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 682 ~fD~v~s~~~~-------~~~~-~~~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+||+|+.-..- .... ......+++.+++.|+|||.++.|.-
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 89999976321 1111 12346789999999999999998754
No 469
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=6.1e-06 Score=89.60 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDS 34 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~ 34 (850)
.||+|||||+||++||..|++.| +|+|+|+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 38999999999999999999999 9999999654
No 470
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.07 E-value=3.3e-06 Score=95.71 Aligned_cols=36 Identities=14% Similarity=0.397 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC---CeEEEEecCCCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAG---VEVVLYEKEDSLG 36 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G---~~V~VlEa~~~~G 36 (850)
+||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 48999999999999999999988 9999999976543
No 471
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.06 E-value=1.7e-05 Score=76.53 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEc-ccCCCC
Q 038410 601 MRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQDHIRLYLC-DYRQMP 678 (850)
Q Consensus 601 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~-D~~~~~ 678 (850)
..|+..+.++..++++++|||+||+.|+++.+++...++ +|+|+|+-..-.+.= ...+..|.+ .|+|..+ |...++
T Consensus 64 ~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn-~v~fk~gvDv~~~~ 141 (267)
T 3p8z_A 64 SAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWN-IVKLMSGKDVFYLP 141 (267)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTT-SEEEECSCCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcC-ceEEEeccceeecC
Confidence 346678888888899999999999999999999988665 699999976533100 001122443 7999999 987776
Q ss_pred CCCCccEEEEecchhhhChh-----hHHHHHHHHHhccccCeEEEEEEe
Q 038410 679 EVKKYDTIISCEMIENVGHE-----YIEEFFGCCESLLAEHGLLLLQFS 722 (850)
Q Consensus 679 ~~~~fD~v~s~~~~~~~~~~-----~~~~~~~~~~r~LkpgG~~~~~~~ 722 (850)
+ .++|.|+|-- -+.-|.. .--..++-+.+.|++ |-+++-.+
T Consensus 142 ~-~~~DtllcDI-geSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl 187 (267)
T 3p8z_A 142 P-EKCDTLLCDI-GESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVL 187 (267)
T ss_dssp C-CCCSEEEECC-CCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEES
T ss_pred C-ccccEEEEec-CCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEc
Confidence 5 6799999862 1211111 112367777899999 78887444
No 472
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.04 E-value=1.2e-05 Score=84.75 Aligned_cols=87 Identities=8% Similarity=0.072 Sum_probs=64.9
Q ss_pred CCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-CCCCccEEEEecc
Q 038410 613 VNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-EVKKYDTIISCEM 691 (850)
Q Consensus 613 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-~~~~fD~v~s~~~ 691 (850)
+++|++|||+||..|+++..++++ |++|++||+.+ +-. .+.. .++|++++.|..... +.++||.|+|-..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~----~l~~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQ----SLMD---TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCH----HHHT---TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cCh----hhcc---CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 689999999999999999999998 89999999874 211 1111 238999999988877 4578999999644
Q ss_pred hhhhChhhHHHHHHHHHhccccC
Q 038410 692 IENVGHEYIEEFFGCCESLLAEH 714 (850)
Q Consensus 692 ~~~~~~~~~~~~~~~~~r~Lkpg 714 (850)
. + +......+.+.|..+
T Consensus 280 ~-~-----p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 E-K-----PAKVAALMAQWLVNG 296 (375)
T ss_dssp S-C-----HHHHHHHHHHHHHTT
T ss_pred C-C-----hHHhHHHHHHHHhcc
Confidence 3 2 345555555555554
No 473
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.03 E-value=2.2e-05 Score=88.22 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=40.7
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCceEEEee-C--Cc--EEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV-N--GS--QEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~--G~--~i~ad~VV~A~p~~ 267 (850)
+.+.+++.|++++++++|++|+.+++++.|++. + |+ ++.||.||+|++..
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 344455569999999999999988777888776 6 76 79999999999853
No 474
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.03 E-value=3.8e-06 Score=93.47 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=33.9
Q ss_pred hccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 223 KSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 223 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
++.|+++..+ +|++|+.+++ +|++++|+++.+|++|+|+++.
T Consensus 67 ~~~gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGTEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECCCCE
T ss_pred HHCCcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeCCCC
Confidence 3447888655 7999998766 5678899999999999999864
No 475
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.02 E-value=3.5e-06 Score=91.56 Aligned_cols=36 Identities=36% Similarity=0.552 Sum_probs=32.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGG 37 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (850)
||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 899999999999999999999999999999764443
No 476
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.02 E-value=4.9e-06 Score=94.36 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGG 37 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (850)
||||||+|++||++|..|.++|...+++|+.+..|+
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 899999999999999999999888888888777766
No 477
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.01 E-value=2.5e-05 Score=88.47 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=103.5
Q ss_pred cCCChHHHHHhcCC---CcceeecccCCCCCCHHHHHHHHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHh-------
Q 038410 567 YDVSNELFSLFLGK---SMMYSCAIFKSEYEDLDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQ------- 636 (850)
Q Consensus 567 Yd~~~~~~~~~l~~---~~~ys~~~~~~~~~~l~~aq~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~------- 636 (850)
.|...+.|+.++.. .-.-...|| +| +...+.|++.+..+++.+|+|-.||+|++...+.+.
T Consensus 175 ~d~lG~~yE~ll~~~~~~~g~~Gqfy-TP--------~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~ 245 (530)
T 3ufb_A 175 MHTLSRLYETMLREMRDAAGDSGEFY-TP--------RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKT 245 (530)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSCCCCC-CC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCS
T ss_pred hHHHHHHHHHHHHHHHHhcCcCceEC-Cc--------HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccc
Confidence 35556777777642 111122344 33 456678888889999999999999999999887653
Q ss_pred -------cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEcccCCCC-----CCCCccEEEEecchhhh---------
Q 038410 637 -------TGCKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMP-----EVKKYDTIISCEMIENV--------- 695 (850)
Q Consensus 637 -------~~~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~D~~~~~-----~~~~fD~v~s~~~~~~~--------- 695 (850)
....++|+|+++.+...|+-+.--+|.. ...+.++|....+ ...+||+|+++..+.--
T Consensus 246 ~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~ 324 (530)
T 3ufb_A 246 VEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNF 324 (530)
T ss_dssp HHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTS
T ss_pred hhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchhhhcccccceEEEecCCCCccccccccccC
Confidence 1246999999999999999988877875 4577888865543 23579999999877321
Q ss_pred ----Ch-hhHHHHHHHHHhccc-------cCeEEEEEEe
Q 038410 696 ----GH-EYIEEFFGCCESLLA-------EHGLLLLQFS 722 (850)
Q Consensus 696 ----~~-~~~~~~~~~~~r~Lk-------pgG~~~~~~~ 722 (850)
+. +.-..+++.+.+.|| |||++.+..+
T Consensus 325 ~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 325 PEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred chhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 00 112346778888887 7999988654
No 478
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.00 E-value=3e-06 Score=94.66 Aligned_cols=39 Identities=41% Similarity=0.673 Sum_probs=36.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHA 39 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (850)
+||+|||||+|||+||+.|++.|++|+|+|+++.+||..
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 589999999999999999999999999999999999953
No 479
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.99 E-value=6.9e-06 Score=82.91 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=73.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEEc-ccCCCCCC
Q 038410 603 KVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYTETKVKEAGLQDHIRLYLC-DYRQMPEV 680 (850)
Q Consensus 603 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~gl~~~v~~~~~-D~~~~~~~ 680 (850)
|+..+.++--++++++|||+||++|+++.+++++.+ ..|+|+|++..+...... ....+. +-+.+... |+..++ .
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~-~ 145 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP-T 145 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC-C
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC-C
Confidence 455666663357899999999999999999998634 479999997643111000 000010 12333322 444443 4
Q ss_pred CCccEEEEecchhhhChhhH-----HHHHHHHHhccccC-eEEEEEEec
Q 038410 681 KKYDTIISCEMIENVGHEYI-----EEFFGCCESLLAEH-GLLLLQFSS 723 (850)
Q Consensus 681 ~~fD~v~s~~~~~~~~~~~~-----~~~~~~~~r~Lkpg-G~~~~~~~~ 723 (850)
+.+|+|+|..+-. .|.... ...++-+.++|+|| |.|++-.+.
T Consensus 146 ~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 146 EPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 6899999975544 444322 23477778999999 999997654
No 480
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.98 E-value=3e-05 Score=86.33 Aligned_cols=51 Identities=18% Similarity=0.248 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.++++|++++++++|++++.. .|++.+|+++.||.||+|++.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEECCCE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEEece
Confidence 467778888999999999999999998632 477789999999999999874
No 481
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.96 E-value=4e-06 Score=88.94 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAKAGVEVVLYEKED 33 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~ 33 (850)
||+|||||+|||+||.+|+++|++|+|+|+..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 89999999999999999999999999999954
No 482
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.94 E-value=2e-05 Score=77.61 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHcCCC---CCE---EEEEc-c
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYTETKVKEAGLQ---DHI---RLYLC-D 673 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~gl~---~~v---~~~~~-D 673 (850)
-|+..|-++--++||++|||+||+.|+++.+++++.+. .|.|.++...- . ...+. ..+ .|.++ |
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCC
Confidence 35567777766799999999999999999999987333 44565554331 0 01121 133 55557 9
Q ss_pred cCCCCCCCCccEEEEecchhhhChhhH-----HHHHHHHHhccccCe-EEEEEEec
Q 038410 674 YRQMPEVKKYDTIISCEMIENVGHEYI-----EEFFGCCESLLAEHG-LLLLQFSS 723 (850)
Q Consensus 674 ~~~~~~~~~fD~v~s~~~~~~~~~~~~-----~~~~~~~~r~LkpgG-~~~~~~~~ 723 (850)
+.+++ ..++|+|+|--.= .-|.... -.+++-+.++||||| .|++-.+.
T Consensus 132 f~~~~-~~~~DvVLSDMAP-nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 132 VFYKP-SEISDTLLCDIGE-SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGSC-CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccCCC-CCCCCEEEeCCCC-CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 98865 3579999986421 1222111 115777789999999 88886554
No 483
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.92 E-value=5.4e-06 Score=90.74 Aligned_cols=35 Identities=40% Similarity=0.499 Sum_probs=33.3
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKA--GVEVVLYEKEDSL 35 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~ 35 (850)
|||+|||||++||++|+.|+++ |++|+|+|++..+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 7999999999999999999999 9999999998766
No 484
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.91 E-value=9.5e-05 Score=83.57 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCCc----EEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGS----QEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~----~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.++++|++|++|++|++|+.++..+.+...+|+ ++.||.||+|++.
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 467788888999999999999999999643322344555663 6899999999863
No 485
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.90 E-value=6.8e-05 Score=83.79 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=37.7
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+++.|++|+++++|++|+.+ +++ .|.+ +|+++.||.||+|++..
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 455566679999999999999876 444 5665 56679999999999853
No 486
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.87 E-value=4.5e-05 Score=87.30 Aligned_cols=54 Identities=13% Similarity=0.116 Sum_probs=39.9
Q ss_pred HHhhccCceEeeCCceEEEEec----CCc-eEEEee--CCc--EEeCC-EEEEecChHHHHHhh
Q 038410 220 EQLKSWGIQIRMSCEVYSVFPA----DEG-CSIVCV--NGS--QEFYN-GCVMAVHAPDALRIL 273 (850)
Q Consensus 220 ~~l~~~G~~i~~~~~V~~I~~~----~~~-v~V~~~--~G~--~i~ad-~VV~A~p~~~~~~ll 273 (850)
..+.+.+.+|++++.|++|..+ +++ +.|++. +|+ ++.|+ .||+|+++-...+||
T Consensus 235 p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 235 PNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp TTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 3445568999999999999987 444 356654 564 46786 599999988777765
No 487
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.86 E-value=5.6e-05 Score=85.32 Aligned_cols=49 Identities=20% Similarity=0.155 Sum_probs=38.8
Q ss_pred HHHHhhccCceEeeCCceEEEEe--cCCceEEEee-----CCcEEeCCEEEEecCh
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFP--ADEGCSIVCV-----NGSQEFYNGCVMAVHA 266 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~--~~~~v~V~~~-----~G~~i~ad~VV~A~p~ 266 (850)
+.+.+++.|++|+++++|++|+. +++.+.|++. +++++.||.||+|++.
T Consensus 230 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 230 TQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 44455566999999999999997 5566777765 4567999999999985
No 488
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.85 E-value=6e-05 Score=84.44 Aligned_cols=50 Identities=10% Similarity=0.143 Sum_probs=39.5
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCceEEEee---CCcEEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCV---NGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+++.|++++++++|++|+.+++++.|++. +++++.+|.||+|++..
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 344455569999999999999987777777765 45679999999999853
No 489
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.80 E-value=0.0001 Score=81.16 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=37.7
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCceEEEeeCCcEEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNGSQEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~i~ad~VV~A~p~~ 267 (850)
+.+.+++.|++|+++++|++|+ + + .|++.+|+++.||.||+|++..
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCC
Confidence 4445556699999999999998 3 3 6777889899999999999853
No 490
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.80 E-value=1.1e-05 Score=89.85 Aligned_cols=33 Identities=27% Similarity=0.596 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKED 33 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~ 33 (850)
+||+|||||++||++|+.|+++|++|+|+|++.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 489999999999999999999999999999965
No 491
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.79 E-value=1.3e-05 Score=95.18 Aligned_cols=40 Identities=35% Similarity=0.568 Sum_probs=37.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcce
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHAK 40 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (850)
|||+|||||+|||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 5899999999999999999999999999999999999654
No 492
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.78 E-value=6.4e-05 Score=78.75 Aligned_cols=59 Identities=19% Similarity=0.152 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEccCccHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 038410 602 RKVSLLIEKARVNKGLDVLEIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYTETKVKEAG 662 (850)
Q Consensus 602 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~g 662 (850)
..++.+++... .+|+.|||++||+|..+..+++. |.+++|+|+++++++.|+++++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 45567777665 78999999999999999998886 9999999999999999999998753
No 493
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.77 E-value=7.6e-05 Score=84.25 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=41.7
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCceEEEeeC----CcEEeCCEEEEecChH
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVN----GSQEFYNGCVMAVHAP 267 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~----G~~i~ad~VV~A~p~~ 267 (850)
+.+.+++.|++|+++++|++|+.+++++.|++.+ |+++.||.||+|++..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 4555666799999999999999887778888777 7779999999999854
No 494
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.76 E-value=1.9e-05 Score=83.62 Aligned_cols=39 Identities=36% Similarity=0.521 Sum_probs=35.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHA 39 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (850)
|||+|||||+||+.||+.|+++|++|+|+|++...+.-+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 599999999999999999999999999999987665543
No 495
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73 E-value=7.7e-05 Score=83.59 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCC
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDS 34 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~ 34 (850)
|+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 5799999999999999999999999999998544
No 496
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.72 E-value=1.3e-05 Score=90.50 Aligned_cols=38 Identities=39% Similarity=0.610 Sum_probs=35.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGH 38 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (850)
+||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 43 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGT 43 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCc
Confidence 38999999999999999999999999999998888884
No 497
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.65 E-value=0.0003 Score=79.44 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=37.3
Q ss_pred HHHHhhccCceEeeCCceEEEEecCCce-EEEeeCCcEEeCCEEEEecCh
Q 038410 218 VSEQLKSWGIQIRMSCEVYSVFPADEGC-SIVCVNGSQEFYNGCVMAVHA 266 (850)
Q Consensus 218 L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~i~ad~VV~A~p~ 266 (850)
+.+.+++.|++|+++++|++|+. ++++ .|.+ +|+++.||.||+|++.
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 45556667999999999999986 4444 4555 6778999999999985
No 498
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=1.9e-05 Score=88.49 Aligned_cols=53 Identities=19% Similarity=0.085 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhccCceEeeCCceEEEEecCCceEEEeeCC--cEEeCCEEEEecCh
Q 038410 212 HSQIDKVSEQLKSWGIQIRMSCEVYSVFPADEGCSIVCVNG--SQEFYNGCVMAVHA 266 (850)
Q Consensus 212 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G--~~i~ad~VV~A~p~ 266 (850)
..+.+.+.+.+++.|++++++++|++|+. ++ +.|++.+| +++.||.||+|++.
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCC
Confidence 45677778888888999999999999987 43 66664456 57889999999885
No 499
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.62 E-value=0.00018 Score=82.10 Aligned_cols=34 Identities=32% Similarity=0.359 Sum_probs=31.3
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCeEEEEecCCCC
Q 038410 2 RVAVIGGGMSGLVSAYVLAK-AGVEVVLYEKEDSL 35 (850)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-~G~~V~VlEa~~~~ 35 (850)
|+||||||.||+++|..|++ .|++|+|||+....
T Consensus 4 D~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 4 DYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp EEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 89999999999999999999 69999999996554
No 500
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.61 E-value=3.6e-05 Score=90.63 Aligned_cols=39 Identities=33% Similarity=0.571 Sum_probs=36.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCcc
Q 038410 1 MRVAVIGGGMSGLVSAYVLAKAGVEVVLYEKEDSLGGHA 39 (850)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (850)
+||+|||||+|||+||..|+++|++|+|+|+++.+||..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCee
Confidence 589999999999999999999999999999999999964
Done!