BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038413
(191 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia
Breweri And Petunia Hybrida Represent Two Distinct
Lineages
Length = 321
Score = 280 bits (717), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/195 (68%), Positives = 161/195 (82%), Gaps = 5/195 (2%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE++EHEK+VS+LK+VD+VIS + +P Q+ I++AIK AGNIKRFLPS+FGCEEDR++
Sbjct: 63 GEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIK 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPH----DDVVVYG 116
PLPPFE+ LEKKRI+RRAIEA +PYT+VSANC+GAYFVN LL P PH DD+V+YG
Sbjct: 123 PLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHP-SPHPNRNDDIVIYG 181
Query: 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176
GE K V NYEEDIAK TIKV DPR CNRIVIYRP NIISQ ELISLWE K+G SFK+
Sbjct: 182 TGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKK 241
Query: 177 VHISEEELVKLSQIL 191
VH+ +E+LV+LSQ L
Sbjct: 242 VHMPDEQLVRLSQEL 256
>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QX7|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QYS|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QYS|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QZZ|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QZZ|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2R6J|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2R6J|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
Length = 318
Score = 261 bits (668), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 157/191 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A+PQ LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 65 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E+KR++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 184
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 185 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244
Query: 181 EEELVKLSQIL 191
EEE+V L++ L
Sbjct: 245 EEEIVALTKEL 255
>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
pdb|2QW8|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
Length = 314
Score = 261 bits (668), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 157/191 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A+PQ LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 61 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 120
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E+KR++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 121 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 180
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 181 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 240
Query: 181 EEELVKLSQIL 191
EEE+V L++ L
Sbjct: 241 EEEIVALTKEL 251
>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia
Breweri And Petunia Hybrida Represent Two Distinct
Lineages
pdb|3C3X|B Chain B, The Multiple Phenylpropene Synthases In Both Clarkia
Breweri And Petunia Hybrida Represent Two Distinct
Lineages
Length = 318
Score = 261 bits (666), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 157/191 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A PQ+LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 65 GELDEHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E+KR++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 184
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 185 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244
Query: 181 EEELVKLSQIL 191
EEE+V L++ L
Sbjct: 245 EEEIVALTKEL 255
>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum
Complexed With Emdf
pdb|2R2G|B Chain B, Structure Of Eugenol Synthase From Ocimum Basilicum
Complexed With Emdf
Length = 318
Score = 260 bits (665), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 157/191 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A+PQ LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 65 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E++R++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 125 ALPPFEALIERQRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 184
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 185 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244
Query: 181 EEELVKLSQIL 191
EEE+V L++ L
Sbjct: 245 EEEIVALTKEL 255
>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
pdb|1QYC|B Chain B, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
Length = 308
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G +D+H +V +K VDVVISTV Q Q+ I+ AIK G +KRF PSEFG + D V
Sbjct: 63 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGN 117
+ P ++ E K VRRAIEA IPYT+VS+NC+ YF+ L + P D VV+ G+
Sbjct: 123 AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD 182
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G A+ VF EEDI TIK ++DPRT N+ + R N +S EL++LWE+K ++ ++
Sbjct: 183 GNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA 242
Query: 178 HISEEELVKL 187
++ EEE++KL
Sbjct: 243 YVPEEEVLKL 252
>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
pdb|1QYD|B Chain B, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
pdb|1QYD|C Chain C, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
pdb|1QYD|D Chain D, Crystal Structures Of Pinoresinol-Lariciresinol And
Phenylcoumaran Benzylic Ether Reductases, And Their
Relationship To Isoflavone Reductases
Length = 313
Score = 164 bits (414), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 123/194 (63%), Gaps = 9/194 (4%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYP----QFLDQLKIVHAIKVAGNIKRFLPSEFGCEE 56
LD+H+++V LK+VDVVIS +A L+QLK+V AIK AGNIKRFLPSEFG +
Sbjct: 62 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 121
Query: 57 DRV-RPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLR----PFEPHDD 111
D + L P KR VRRAIEA IPYT+VS+N + YF L + P D
Sbjct: 122 DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK 181
Query: 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171
V++YG+G K ++ E+D+ TIK I+DP+T N+ + RP NI+SQ E+I +WE+ +
Sbjct: 182 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 241
Query: 172 RSFKRVHISEEELV 185
++ +++IS ++ +
Sbjct: 242 QNLDKIYISSQDFL 255
>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase
pdb|2GAS|B Chain B, Crystal Structure Of Isoflavone Reductase
Length = 307
Score = 149 bits (377), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 116/189 (61%), Gaps = 3/189 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G++++HE +V +K+VD+VI DQ+KI+ AIK AGN+K+F PSEFG + DR
Sbjct: 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHD 121
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGN 117
+ P E+K +RR IEA +PYT++ + + YF+ L + P D VV+ G+
Sbjct: 122 AVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD 181
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G K + E D+ TI+ NDP T N+ V R N ++Q E+I+LWE+K G++ ++
Sbjct: 182 GNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKT 241
Query: 178 HISEEELVK 186
++SEE+++K
Sbjct: 242 YVSEEQVLK 250
>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase
From Vitis Vinifera
pdb|3I5M|A Chain A, Structure Of The Apo Form Of Leucoanthocyanidin Reductase
From Vitis Vinifera
pdb|3I6I|A Chain A, Structure Of The Binary Complex Leucoanthocyanidin
Reductase - Nadph From Vitis Vinifera
pdb|3I6Q|A Chain A, Structure Of The Binary Complex Leucoanthocyanidin
Reductase-Nadph From Vitis Vinifera
Length = 346
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 5/190 (2%)
Query: 1 GELDEHEKIVSILKE--VDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDR 58
G ++E E + ILKE +D+V+STV LDQ+ +V A+K G IKRFLPSEFG + +R
Sbjct: 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR 126
Query: 59 VRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVY 115
P+ P +KR VR+ +E IP+T++ N ++ + P E P D +Y
Sbjct: 127 ADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIY 186
Query: 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175
G+G KA F DI K T+K ++D RT N+ V +RP N ++ EL S+WE+K GR+
Sbjct: 187 GDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246
Query: 176 RVHISEEELV 185
RV ++E++L+
Sbjct: 247 RVTVTEDDLL 256
>pdb|2JL1|A Chain A, Structural Insight Into Bioremediation Of Triphenylmethane
Dyes By Citrobacter Sp. Triphenylmethane Reductase
Length = 287
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 23 VAYPQFLDQLKIV-HA--IKVA--GNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77
++ P + + L IV HA +K A +K + + E+ + PL E
Sbjct: 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATE------Y 126
Query: 78 AIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAKAVFNYEEDIAKCTI 135
AI IPYTF+ Y +FVN LR +V G+G +V E +A T+
Sbjct: 127 AIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATV 185
>pdb|2VRB|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(H)
Length = 287
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 23 VAYPQFLDQLKIV-HA--IKVA--GNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77
++ P + + L IV HA +K A +K + + E+ + PL E
Sbjct: 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATE------Y 126
Query: 78 AIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAKAVFNYEEDIAKCTI 135
AI IPYTF+ Y +FVN LR +V G+G +V E +A T+
Sbjct: 127 AIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATV 185
>pdb|2VRC|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
pdb|2VRC|B Chain B, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
pdb|2VRC|C Chain C, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
Length = 287
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 23 VAYPQFLDQLKIV-HA--IKVA--GNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77
++ P + + L IV HA +K A +K + + E+ + PL E
Sbjct: 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATE------Y 126
Query: 78 AIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAKAVFNYEEDIAKCTI 135
AI IPYTF+ Y +FVN LR +V G+G +V E +A T+
Sbjct: 127 AIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATV 185
>pdb|2VRC|D Chain D, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
Length = 287
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 23 VAYPQFLDQLKIV-HA--IKVA--GNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77
++ P + + L IV HA +K A +K + + E+ + PL E
Sbjct: 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATE------Y 126
Query: 78 AIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAKAVFNYEEDIAKCTI 135
A IPYTF+ Y +FVN LR +V G+G +V E +A T+
Sbjct: 127 ATRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATV 185
>pdb|3E48|A Chain A, Crystal Structure Of A Nucleoside-Diphosphate-Sugar
Epimerase (Sav0421) From Staphylococcus Aureus,
Northeast Structural Genomics Consortium Target Zr319
pdb|3E48|B Chain B, Crystal Structure Of A Nucleoside-Diphosphate-Sugar
Epimerase (Sav0421) From Staphylococcus Aureus,
Northeast Structural Genomics Consortium Target Zr319
Length = 289
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 19/148 (12%)
Query: 7 EKIVSILKEVDVV--ISTVAYPQFL---DQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRP 61
E V K D V I ++ +P F + +V+A K +G + + +
Sbjct: 57 ESXVEAFKGXDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFH 116
Query: 62 LPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEP---HDDVVVYGNG 118
P+ Y R + I YT+V Y L+P+ P + ++Y G
Sbjct: 117 XSPYFGY------ASRLLSTSGIDYTYVRXAXYXD-----PLKPYLPELXNXHKLIYPAG 165
Query: 119 EAKAVFNYEEDIAKCTIKVINDPRTCNR 146
+ + + DIA+ I +I +P T +
Sbjct: 166 DGRINYITRNDIARGVIAIIKNPDTWGK 193
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,505,360
Number of Sequences: 62578
Number of extensions: 217248
Number of successful extensions: 469
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 449
Number of HSP's gapped (non-prelim): 16
length of query: 191
length of database: 14,973,337
effective HSP length: 93
effective length of query: 98
effective length of database: 9,153,583
effective search space: 897051134
effective search space used: 897051134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)