Query 038413
Match_columns 191
No_of_seqs 120 out of 1086
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 10:47:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038413.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038413hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05368 NmrA: NmrA-like famil 100.0 4.9E-30 1.1E-34 191.7 15.4 175 1-178 50-233 (233)
2 CHL00194 ycf39 Ycf39; Provisio 99.9 6.3E-26 1.4E-30 176.7 18.2 175 1-184 50-235 (317)
3 TIGR03649 ergot_EASG ergot alk 99.9 1.1E-25 2.4E-30 172.9 18.5 175 1-189 46-232 (285)
4 PLN02657 3,8-divinyl protochlo 99.9 7.4E-23 1.6E-27 163.4 16.3 176 1-185 118-311 (390)
5 PF01073 3Beta_HSD: 3-beta hyd 99.9 1.5E-22 3.3E-27 154.8 15.9 178 1-180 52-279 (280)
6 COG1087 GalE UDP-glucose 4-epi 99.9 1.7E-21 3.7E-26 145.4 14.6 178 1-180 51-281 (329)
7 PLN00016 RNA-binding protein; 99.9 3.1E-21 6.7E-26 153.7 13.3 170 9-182 122-303 (378)
8 PRK15181 Vi polysaccharide bio 99.9 1.4E-20 3E-25 148.5 15.4 170 1-172 76-284 (348)
9 PLN02695 GDP-D-mannose-3',5'-e 99.8 1.4E-19 3.1E-24 143.8 16.2 176 1-180 71-291 (370)
10 PLN02572 UDP-sulfoquinovose sy 99.8 6.9E-19 1.5E-23 142.6 15.0 176 1-179 120-369 (442)
11 COG1088 RfbB dTDP-D-glucose 4, 99.8 1.2E-18 2.7E-23 129.8 14.0 172 1-175 58-267 (340)
12 TIGR01214 rmlD dTDP-4-dehydror 99.8 3.5E-18 7.5E-23 131.3 15.2 170 1-175 34-233 (287)
13 PLN02260 probable rhamnose bio 99.8 2.6E-18 5.5E-23 146.1 15.7 172 1-174 64-273 (668)
14 PLN02427 UDP-apiose/xylose syn 99.8 3.1E-18 6.6E-23 136.9 15.0 169 1-172 72-308 (386)
15 PRK10217 dTDP-glucose 4,6-dehy 99.8 4.5E-18 9.9E-23 134.5 15.6 169 1-172 58-272 (355)
16 PRK11908 NAD-dependent epimera 99.8 6.5E-18 1.4E-22 133.2 15.7 172 1-174 53-275 (347)
17 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 1.4E-17 3.1E-22 129.3 15.5 170 1-173 57-263 (317)
18 PLN02725 GDP-4-keto-6-deoxyman 99.8 3.8E-17 8.2E-22 126.5 16.6 175 1-178 33-257 (306)
19 PRK09987 dTDP-4-dehydrorhamnos 99.8 3.1E-17 6.8E-22 126.9 15.9 167 1-171 38-235 (299)
20 PRK10084 dTDP-glucose 4,6 dehy 99.8 3.2E-17 6.9E-22 129.5 15.4 170 1-173 57-280 (352)
21 PRK10675 UDP-galactose-4-epime 99.8 1.2E-16 2.5E-21 125.6 18.0 178 1-180 57-290 (338)
22 PLN02166 dTDP-glucose 4,6-dehy 99.8 8.8E-18 1.9E-22 135.8 11.8 165 9-178 178-382 (436)
23 TIGR01472 gmd GDP-mannose 4,6- 99.7 8.6E-17 1.9E-21 126.7 16.3 170 1-174 62-273 (343)
24 PLN02214 cinnamoyl-CoA reducta 99.7 5.9E-17 1.3E-21 127.6 15.2 164 1-171 67-269 (342)
25 PRK07201 short chain dehydroge 99.7 6.4E-17 1.4E-21 137.4 16.4 180 1-183 58-283 (657)
26 PRK08125 bifunctional UDP-gluc 99.7 5.7E-17 1.2E-21 137.5 15.7 170 1-173 367-588 (660)
27 PLN02206 UDP-glucuronate decar 99.7 3.5E-17 7.6E-22 132.6 13.1 166 9-179 177-382 (442)
28 TIGR02197 heptose_epim ADP-L-g 99.7 9.4E-17 2E-21 124.7 14.7 173 1-178 48-267 (314)
29 KOG1502 Flavonol reductase/cin 99.7 1.3E-16 2.8E-21 122.0 14.7 167 1-172 64-273 (327)
30 PLN02240 UDP-glucose 4-epimera 99.7 5.4E-16 1.2E-20 122.4 18.6 178 1-180 65-299 (352)
31 TIGR01179 galE UDP-glucose-4-e 99.7 2.7E-16 5.8E-21 122.6 16.0 177 1-179 54-284 (328)
32 PLN02686 cinnamoyl-CoA reducta 99.7 1.3E-16 2.8E-21 126.7 14.2 174 1-179 114-332 (367)
33 PRK05865 hypothetical protein; 99.7 1E-16 2.2E-21 137.1 13.8 149 1-170 47-202 (854)
34 PF13460 NAD_binding_10: NADH( 99.7 1.3E-16 2.7E-21 114.9 12.1 130 1-140 46-183 (183)
35 COG0451 WcaG Nucleoside-diphos 99.7 3.9E-16 8.6E-21 121.1 15.7 171 1-175 49-261 (314)
36 PLN02986 cinnamyl-alcohol dehy 99.7 1E-16 2.2E-21 125.2 12.2 163 1-171 63-270 (322)
37 PRK11150 rfaD ADP-L-glycero-D- 99.7 4.4E-16 9.6E-21 120.9 15.3 153 15-172 68-256 (308)
38 PF01370 Epimerase: NAD depend 99.7 4.2E-16 9.2E-21 116.2 12.3 150 1-151 49-236 (236)
39 TIGR03466 HpnA hopanoid-associ 99.7 2E-15 4.4E-20 117.8 16.5 175 1-182 50-259 (328)
40 PLN02662 cinnamyl-alcohol dehy 99.7 1.7E-15 3.6E-20 118.2 15.6 164 1-172 62-270 (322)
41 PLN02650 dihydroflavonol-4-red 99.7 1.3E-15 2.8E-20 120.4 15.1 166 1-171 63-272 (351)
42 TIGR03589 PseB UDP-N-acetylglu 99.7 1.2E-15 2.6E-20 119.4 13.5 160 1-172 60-246 (324)
43 PLN00198 anthocyanidin reducta 99.7 2.3E-15 4.9E-20 118.4 15.2 168 1-172 66-285 (338)
44 PLN02653 GDP-mannose 4,6-dehyd 99.7 2.9E-15 6.4E-20 117.8 15.6 169 1-173 67-278 (340)
45 KOG2865 NADH:ubiquinone oxidor 99.7 1.5E-15 3.3E-20 112.9 11.7 175 2-184 117-307 (391)
46 TIGR01746 Thioester-redct thio 99.6 6.4E-15 1.4E-19 116.5 14.7 179 6-189 79-295 (367)
47 PLN02996 fatty acyl-CoA reduct 99.6 8.1E-15 1.7E-19 120.3 15.7 167 5-173 102-360 (491)
48 TIGR01777 yfcH conserved hypot 99.6 7.8E-15 1.7E-19 112.8 14.8 175 7-186 49-256 (292)
49 TIGR02622 CDP_4_6_dhtase CDP-g 99.6 5.8E-15 1.3E-19 116.6 14.0 170 1-171 59-277 (349)
50 KOG0747 Putative NAD+-dependen 99.6 1.4E-15 3.1E-20 112.8 9.3 170 1-172 64-269 (331)
51 COG1091 RfbD dTDP-4-dehydrorha 99.6 8.6E-15 1.9E-19 110.3 13.6 172 1-177 34-233 (281)
52 PF04321 RmlD_sub_bind: RmlD s 99.6 1.5E-15 3.3E-20 116.7 9.6 179 1-183 35-245 (286)
53 PLN02989 cinnamyl-alcohol dehy 99.6 1.2E-14 2.6E-19 113.7 14.8 163 1-171 63-271 (325)
54 KOG1430 C-3 sterol dehydrogena 99.6 2.2E-14 4.8E-19 111.7 14.1 178 1-181 62-279 (361)
55 PLN02583 cinnamoyl-CoA reducta 99.6 4.9E-14 1.1E-18 109.0 15.5 164 1-172 64-265 (297)
56 PLN00141 Tic62-NAD(P)-related 99.6 8.5E-14 1.9E-18 105.1 15.6 158 1-168 69-250 (251)
57 PLN02778 3,5-epimerase/4-reduc 99.6 1.4E-13 3.1E-18 106.4 15.0 166 1-176 41-243 (298)
58 COG0702 Predicted nucleoside-d 99.6 3.5E-13 7.5E-18 102.7 15.8 180 1-189 49-237 (275)
59 PLN03209 translocon at the inn 99.5 1.4E-13 3E-18 113.0 13.6 160 1-167 145-321 (576)
60 KOG1429 dTDP-glucose 4-6-dehyd 99.5 1.1E-13 2.3E-18 103.0 11.0 166 8-178 84-289 (350)
61 PLN02896 cinnamyl-alcohol dehy 99.5 9.6E-13 2.1E-17 104.1 16.5 169 1-172 65-293 (353)
62 KOG1371 UDP-glucose 4-epimeras 99.5 9.6E-13 2.1E-17 99.8 13.6 177 1-180 61-293 (343)
63 COG1086 Predicted nucleoside-d 99.5 2.7E-12 5.9E-17 103.9 14.3 177 1-188 309-520 (588)
64 PF02719 Polysacc_synt_2: Poly 99.5 3.7E-13 8.1E-18 102.1 8.5 162 1-172 61-249 (293)
65 KOG1431 GDP-L-fucose synthetas 99.4 2.9E-11 6.3E-16 87.5 12.8 175 1-178 39-265 (315)
66 COG1090 Predicted nucleoside-d 99.3 1.5E-10 3.2E-15 86.3 14.8 176 6-185 46-253 (297)
67 PLN02260 probable rhamnose bio 99.3 4.6E-11 9.9E-16 102.0 14.0 174 1-185 412-623 (668)
68 TIGR03443 alpha_am_amid L-amin 99.3 5.6E-11 1.2E-15 108.7 15.0 179 5-188 1051-1278(1389)
69 PRK12320 hypothetical protein; 99.3 6.1E-11 1.3E-15 100.2 12.8 148 1-169 47-202 (699)
70 COG2910 Putative NADH-flavin r 99.3 1.8E-10 3.9E-15 80.8 12.5 146 1-151 48-210 (211)
71 PLN02503 fatty acyl-CoA reduct 99.2 1.4E-09 3E-14 91.0 15.3 171 1-172 199-474 (605)
72 KOG1203 Predicted dehydrogenas 99.0 4.3E-09 9.4E-14 83.4 11.6 132 15-151 153-301 (411)
73 PF07993 NAD_binding_4: Male s 99.0 2E-09 4.3E-14 81.3 7.5 133 1-134 67-249 (249)
74 PRK06482 short chain dehydroge 99.0 1.7E-08 3.7E-13 77.2 11.9 164 1-172 55-264 (276)
75 PRK08263 short chain dehydroge 98.8 4E-08 8.6E-13 75.2 10.1 164 1-170 56-262 (275)
76 PRK12825 fabG 3-ketoacyl-(acyl 98.8 9E-08 1.9E-12 71.6 11.7 145 1-156 63-247 (249)
77 PRK13394 3-hydroxybutyrate deh 98.8 6.2E-08 1.3E-12 73.3 10.9 147 1-152 63-257 (262)
78 PRK05875 short chain dehydroge 98.8 8.7E-08 1.9E-12 73.2 10.8 162 1-172 65-272 (276)
79 KOG4039 Serine/threonine kinas 98.8 2.7E-08 5.9E-13 69.6 6.5 89 2-97 70-172 (238)
80 TIGR01963 PHB_DH 3-hydroxybuty 98.7 1.4E-07 3E-12 71.0 10.5 147 1-152 57-250 (255)
81 PRK12429 3-hydroxybutyrate deh 98.7 1.9E-07 4.2E-12 70.4 11.3 147 1-152 60-253 (258)
82 PRK07825 short chain dehydroge 98.7 5.8E-07 1.3E-11 68.6 13.1 171 1-190 57-268 (273)
83 PRK09291 short chain dehydroge 98.6 2.3E-07 4.9E-12 70.1 9.2 137 1-142 58-230 (257)
84 PRK12828 short chain dehydroge 98.6 1E-06 2.2E-11 65.6 12.3 138 1-157 61-238 (239)
85 COG1089 Gmd GDP-D-mannose dehy 98.6 2E-06 4.3E-11 64.8 13.4 170 1-177 62-275 (345)
86 PRK08063 enoyl-(acyl carrier p 98.6 4.8E-07 1E-11 68.0 10.2 144 1-152 61-244 (250)
87 PRK06138 short chain dehydroge 98.6 7.1E-07 1.5E-11 67.1 10.1 146 1-151 60-246 (252)
88 PRK07074 short chain dehydroge 98.6 7.7E-07 1.7E-11 67.2 9.8 159 1-169 56-255 (257)
89 PRK07231 fabG 3-ketoacyl-(acyl 98.5 1.7E-06 3.7E-11 64.9 11.0 146 1-152 60-246 (251)
90 PRK07806 short chain dehydroge 98.5 1.2E-06 2.7E-11 65.7 10.2 152 1-156 63-244 (248)
91 PRK12826 3-ketoacyl-(acyl-carr 98.5 1.6E-06 3.4E-11 65.1 10.6 144 1-152 62-245 (251)
92 KOG2774 NAD dependent epimeras 98.5 1.3E-06 2.8E-11 64.2 9.5 172 2-176 95-306 (366)
93 KOG4288 Predicted oxidoreducta 98.5 8E-07 1.7E-11 64.9 8.2 127 8-143 110-265 (283)
94 PRK05653 fabG 3-ketoacyl-(acyl 98.5 1E-06 2.3E-11 65.7 9.0 144 1-155 61-244 (246)
95 PRK08219 short chain dehydroge 98.5 4.3E-06 9.4E-11 61.8 11.8 134 1-150 54-220 (227)
96 PRK06914 short chain dehydroge 98.4 4.6E-06 1E-10 63.8 11.6 152 1-160 61-260 (280)
97 PRK12746 short chain dehydroge 98.4 4.5E-06 9.8E-11 62.9 11.3 144 1-152 63-250 (254)
98 PRK12829 short chain dehydroge 98.4 3.3E-06 7.2E-11 63.9 9.6 147 1-152 65-259 (264)
99 KOG3019 Predicted nucleoside-d 98.4 2.9E-06 6.3E-11 62.0 8.2 101 72-174 160-262 (315)
100 PRK07067 sorbitol dehydrogenas 98.3 3.7E-06 8E-11 63.6 8.8 153 1-158 59-257 (257)
101 PRK06182 short chain dehydroge 98.3 1.5E-05 3.2E-10 60.9 11.7 136 1-141 53-237 (273)
102 PRK05876 short chain dehydroge 98.3 3.8E-05 8.3E-10 58.8 13.9 159 1-171 62-263 (275)
103 PRK07523 gluconate 5-dehydroge 98.3 7.8E-06 1.7E-10 61.7 10.0 149 1-158 66-254 (255)
104 PRK06077 fabG 3-ketoacyl-(acyl 98.3 1.5E-05 3.2E-10 59.9 11.0 146 1-152 63-243 (252)
105 PRK05557 fabG 3-ketoacyl-(acyl 98.3 1.5E-05 3.3E-10 59.5 10.8 142 1-152 62-243 (248)
106 PRK06180 short chain dehydroge 98.3 2.2E-05 4.8E-10 60.1 11.7 145 1-151 57-247 (277)
107 PRK05650 short chain dehydroge 98.2 1.1E-05 2.4E-10 61.5 9.5 133 1-141 56-226 (270)
108 PRK09135 pteridine reductase; 98.2 2.8E-05 6.1E-10 58.2 11.5 149 1-158 64-248 (249)
109 PRK07577 short chain dehydroge 98.2 2.8E-05 6.1E-10 57.8 11.1 144 1-152 48-230 (234)
110 PRK12827 short chain dehydroge 98.2 3E-05 6.5E-10 58.0 11.2 139 1-152 66-246 (249)
111 PRK07775 short chain dehydroge 98.2 1.5E-05 3.2E-10 61.0 9.5 136 1-142 66-241 (274)
112 PRK08017 oxidoreductase; Provi 98.2 2E-05 4.2E-10 59.4 10.1 133 1-142 52-224 (256)
113 PRK12935 acetoacetyl-CoA reduc 98.2 2.2E-05 4.7E-10 58.9 10.3 141 1-152 63-243 (247)
114 TIGR03206 benzo_BadH 2-hydroxy 98.2 2E-05 4.4E-10 59.1 10.1 147 1-152 59-246 (250)
115 PRK06179 short chain dehydroge 98.2 3.8E-05 8.1E-10 58.5 11.5 133 1-142 52-232 (270)
116 PRK07326 short chain dehydroge 98.2 0.00011 2.3E-09 54.8 13.7 136 1-156 61-234 (237)
117 PRK06194 hypothetical protein; 98.2 0.00011 2.4E-09 56.4 14.1 123 1-133 62-230 (287)
118 PRK07666 fabG 3-ketoacyl-(acyl 98.2 4.8E-05 1E-09 56.8 11.6 124 1-141 63-224 (239)
119 PRK07060 short chain dehydroge 98.2 2.1E-05 4.5E-10 58.8 9.6 145 1-152 60-240 (245)
120 COG3320 Putative dehydrogenase 98.2 1.2E-05 2.7E-10 63.0 8.3 92 5-97 77-200 (382)
121 PRK09186 flagellin modificatio 98.2 1.5E-05 3.2E-10 60.1 8.5 142 1-152 62-252 (256)
122 PRK12939 short chain dehydroge 98.1 2.1E-05 4.5E-10 59.0 9.2 143 1-152 63-245 (250)
123 PRK08220 2,3-dihydroxybenzoate 98.1 7.3E-05 1.6E-09 56.2 11.6 147 1-152 55-246 (252)
124 PRK05565 fabG 3-ketoacyl-(acyl 98.1 7.3E-05 1.6E-09 55.9 11.5 142 1-152 62-243 (247)
125 PRK08324 short chain dehydroge 98.1 4.9E-05 1.1E-09 65.5 11.0 150 1-156 477-676 (681)
126 PRK10538 malonic semialdehyde 98.1 9E-05 1.9E-09 55.7 11.3 134 1-143 53-225 (248)
127 PRK07774 short chain dehydroge 98.1 2.9E-05 6.4E-10 58.3 8.4 144 1-157 62-248 (250)
128 PRK06181 short chain dehydroge 98.0 0.00016 3.5E-09 54.7 12.4 132 1-141 57-226 (263)
129 PRK07454 short chain dehydroge 98.0 0.00015 3.3E-09 54.2 11.7 126 1-142 62-225 (241)
130 PRK12938 acetyacetyl-CoA reduc 98.0 9.2E-05 2E-09 55.5 10.5 142 1-152 60-241 (246)
131 PRK07069 short chain dehydroge 98.0 6.3E-05 1.4E-09 56.4 9.3 146 1-151 58-245 (251)
132 PRK06128 oxidoreductase; Provi 98.0 0.00011 2.3E-09 57.1 10.6 149 1-157 113-299 (300)
133 PRK12824 acetoacetyl-CoA reduc 98.0 9.2E-05 2E-09 55.3 9.9 142 1-152 59-240 (245)
134 PRK07041 short chain dehydroge 98.0 0.00011 2.4E-09 54.5 9.9 149 1-156 52-228 (230)
135 TIGR01830 3oxo_ACP_reduc 3-oxo 98.0 0.00011 2.4E-09 54.6 9.9 141 1-151 55-235 (239)
136 PRK12384 sorbitol-6-phosphate 97.9 7.6E-05 1.6E-09 56.4 8.3 147 1-152 60-254 (259)
137 PRK08213 gluconate 5-dehydroge 97.9 0.00016 3.4E-09 54.7 9.8 146 1-152 68-254 (259)
138 PRK12745 3-ketoacyl-(acyl-carr 97.9 0.00039 8.4E-09 52.3 11.6 146 1-156 59-252 (256)
139 PRK06841 short chain dehydroge 97.9 0.0002 4.4E-09 53.9 9.9 143 1-152 68-250 (255)
140 PRK07109 short chain dehydroge 97.8 0.00052 1.1E-08 54.1 12.0 135 1-151 64-238 (334)
141 PRK06124 gluconate 5-dehydroge 97.8 0.0003 6.4E-09 53.1 9.8 144 1-152 67-250 (256)
142 PRK12937 short chain dehydroge 97.8 0.00039 8.4E-09 52.0 10.2 143 1-151 62-241 (245)
143 PRK06463 fabG 3-ketoacyl-(acyl 97.8 0.00032 6.9E-09 52.9 9.7 147 1-152 58-245 (255)
144 PRK12744 short chain dehydroge 97.8 0.0011 2.4E-08 50.1 12.5 145 1-152 68-252 (257)
145 PRK07890 short chain dehydroge 97.7 0.00035 7.6E-09 52.6 9.5 147 1-151 61-252 (258)
146 PRK07904 short chain dehydroge 97.7 0.00086 1.9E-08 50.7 11.5 121 1-142 67-224 (253)
147 KOG1221 Acyl-CoA reductase [Li 97.7 0.0014 3.1E-08 53.4 13.0 165 7-171 98-332 (467)
148 PLN02253 xanthoxin dehydrogena 97.7 0.00045 9.8E-09 52.8 9.8 153 1-160 73-274 (280)
149 PRK12823 benD 1,6-dihydroxycyc 97.7 0.00076 1.6E-08 51.0 10.9 144 1-152 63-256 (260)
150 PRK05993 short chain dehydroge 97.7 0.00039 8.4E-09 53.2 9.3 92 1-98 54-185 (277)
151 PRK08085 gluconate 5-dehydroge 97.7 0.00077 1.7E-08 50.7 10.8 144 1-152 65-248 (254)
152 TIGR01829 AcAcCoA_reduct aceto 97.7 0.00059 1.3E-08 50.8 9.9 142 1-152 57-238 (242)
153 PRK08628 short chain dehydroge 97.7 0.00019 4.1E-09 54.2 7.2 147 1-152 62-248 (258)
154 PRK09134 short chain dehydroge 97.6 0.00056 1.2E-08 51.7 9.3 146 1-159 66-248 (258)
155 PRK12936 3-ketoacyl-(acyl-carr 97.6 0.00087 1.9E-08 50.0 10.2 142 1-152 59-240 (245)
156 PRK07024 short chain dehydroge 97.6 0.0017 3.6E-08 49.1 11.8 120 1-141 57-216 (257)
157 PRK12743 oxidoreductase; Provi 97.6 0.00088 1.9E-08 50.6 9.9 143 1-152 59-241 (256)
158 PRK06123 short chain dehydroge 97.6 0.00071 1.5E-08 50.7 9.3 144 1-152 59-246 (248)
159 PRK06935 2-deoxy-D-gluconate 3 97.6 0.00091 2E-08 50.5 9.9 144 1-152 70-253 (258)
160 KOG1372 GDP-mannose 4,6 dehydr 97.6 0.00068 1.5E-08 50.5 8.4 167 1-173 90-300 (376)
161 PRK07856 short chain dehydroge 97.6 0.0012 2.5E-08 49.7 10.1 148 1-157 54-241 (252)
162 PRK08264 short chain dehydroge 97.6 0.0016 3.5E-08 48.4 10.8 118 1-141 56-208 (238)
163 PRK06196 oxidoreductase; Provi 97.5 0.00097 2.1E-08 52.1 9.7 139 1-142 78-262 (315)
164 PRK06523 short chain dehydroge 97.5 0.0011 2.5E-08 50.0 9.8 152 1-158 56-259 (260)
165 PRK08642 fabG 3-ketoacyl-(acyl 97.5 0.0016 3.4E-08 48.9 10.4 143 1-152 59-248 (253)
166 PRK06114 short chain dehydroge 97.5 0.0016 3.4E-08 49.1 10.3 144 1-152 65-249 (254)
167 PRK08267 short chain dehydroge 97.5 0.0014 2.9E-08 49.6 10.0 128 1-141 55-222 (260)
168 PRK07063 short chain dehydroge 97.5 0.0012 2.6E-08 49.9 9.5 147 1-152 65-252 (260)
169 PRK05866 short chain dehydroge 97.5 0.0032 6.8E-08 48.7 11.9 123 1-141 96-258 (293)
170 PRK07814 short chain dehydroge 97.5 0.0025 5.5E-08 48.3 11.1 142 1-152 66-249 (263)
171 COG4221 Short-chain alcohol de 97.5 0.002 4.4E-08 47.9 10.0 140 2-151 61-240 (246)
172 PRK06701 short chain dehydroge 97.5 0.002 4.2E-08 49.8 10.6 143 1-152 103-284 (290)
173 PRK06500 short chain dehydroge 97.5 0.0014 3E-08 49.1 9.5 147 1-152 59-244 (249)
174 PRK12747 short chain dehydroge 97.5 0.0027 5.8E-08 47.7 11.0 84 66-152 156-248 (252)
175 TIGR02415 23BDH acetoin reduct 97.5 0.0013 2.9E-08 49.3 9.3 147 1-151 56-248 (254)
176 PRK07478 short chain dehydroge 97.4 0.0019 4.1E-08 48.6 9.8 144 1-152 62-247 (254)
177 PRK09730 putative NAD(P)-bindi 97.4 0.0013 2.9E-08 49.1 8.7 143 1-151 58-244 (247)
178 PRK06398 aldose dehydrogenase; 97.4 0.0035 7.6E-08 47.4 10.9 147 1-152 51-242 (258)
179 PRK08251 short chain dehydroge 97.4 0.0048 1E-07 46.2 11.6 121 1-141 60-218 (248)
180 TIGR01832 kduD 2-deoxy-D-gluco 97.4 0.0029 6.2E-08 47.4 10.0 145 1-152 59-243 (248)
181 PRK07097 gluconate 5-dehydroge 97.4 0.0053 1.2E-07 46.5 11.5 147 1-152 66-255 (265)
182 PRK12428 3-alpha-hydroxysteroi 97.4 0.0073 1.6E-07 45.2 12.1 147 1-151 30-227 (241)
183 PRK06113 7-alpha-hydroxysteroi 97.3 0.0027 5.8E-08 47.9 9.6 143 1-152 67-248 (255)
184 PRK06172 short chain dehydroge 97.3 0.0036 7.8E-08 47.0 10.3 145 1-152 63-248 (253)
185 PRK07832 short chain dehydroge 97.3 0.0031 6.7E-08 48.0 10.0 136 1-141 57-232 (272)
186 PRK08643 acetoin reductase; Va 97.3 0.0047 1E-07 46.5 10.8 148 1-152 58-251 (256)
187 TIGR02632 RhaD_aldol-ADH rhamn 97.3 0.0047 1E-07 53.4 11.9 148 1-152 472-668 (676)
188 PRK07035 short chain dehydroge 97.3 0.0037 8.1E-08 46.9 10.2 142 1-151 64-247 (252)
189 PRK09242 tropinone reductase; 97.3 0.004 8.6E-08 47.0 10.4 143 1-151 67-249 (257)
190 PRK06947 glucose-1-dehydrogena 97.3 0.0048 1E-07 46.2 10.4 143 1-151 59-245 (248)
191 PRK07985 oxidoreductase; Provi 97.3 0.0044 9.6E-08 47.9 10.2 143 1-152 107-289 (294)
192 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0071 1.5E-07 44.9 10.9 136 1-151 60-232 (238)
193 PRK08339 short chain dehydroge 97.2 0.0071 1.5E-07 45.9 11.0 151 1-158 65-261 (263)
194 PRK07102 short chain dehydroge 97.2 0.0093 2E-07 44.5 11.4 120 1-141 58-213 (243)
195 PRK06139 short chain dehydroge 97.2 0.0099 2.1E-07 46.9 11.9 129 1-142 63-230 (330)
196 PRK08277 D-mannonate oxidoredu 97.2 0.009 1.9E-07 45.6 11.4 147 1-152 66-270 (278)
197 PRK05717 oxidoreductase; Valid 97.2 0.0049 1.1E-07 46.4 9.8 142 1-152 63-245 (255)
198 PRK08265 short chain dehydroge 97.1 0.0073 1.6E-07 45.7 10.1 145 1-152 59-242 (261)
199 PRK12748 3-ketoacyl-(acyl-carr 97.1 0.014 2.9E-07 44.0 11.5 139 1-152 74-252 (256)
200 PRK06198 short chain dehydroge 97.1 0.0065 1.4E-07 45.8 9.6 146 1-151 63-251 (260)
201 PRK07578 short chain dehydroge 97.1 0.023 5E-07 41.1 12.0 129 1-150 38-198 (199)
202 PRK05867 short chain dehydroge 97.1 0.007 1.5E-07 45.5 9.6 143 1-152 65-248 (253)
203 PRK06057 short chain dehydroge 97.1 0.015 3.2E-07 43.8 11.1 142 1-151 58-244 (255)
204 PRK06101 short chain dehydroge 97.1 0.018 3.9E-07 43.0 11.4 121 1-141 53-206 (240)
205 PRK08217 fabG 3-ketoacyl-(acyl 97.0 0.0053 1.1E-07 45.9 8.3 83 65-152 160-249 (253)
206 PRK08226 short chain dehydroge 97.0 0.0088 1.9E-07 45.2 9.3 147 1-152 61-251 (263)
207 PRK12742 oxidoreductase; Provi 97.0 0.013 2.8E-07 43.5 10.0 140 1-151 58-232 (237)
208 PRK07201 short chain dehydroge 97.0 0.012 2.7E-07 50.5 11.0 121 1-140 427-587 (657)
209 PRK07576 short chain dehydroge 97.0 0.016 3.4E-07 44.0 10.5 144 1-152 65-248 (264)
210 PRK06550 fabG 3-ketoacyl-(acyl 96.9 0.013 2.9E-07 43.4 9.7 143 1-152 52-230 (235)
211 PRK08278 short chain dehydroge 96.9 0.031 6.6E-07 42.7 11.9 134 1-150 69-243 (273)
212 PRK08416 7-alpha-hydroxysteroi 96.9 0.0084 1.8E-07 45.3 8.5 144 1-152 66-255 (260)
213 PRK08936 glucose-1-dehydrogena 96.9 0.015 3.1E-07 44.0 9.7 144 1-152 64-248 (261)
214 PRK12481 2-deoxy-D-gluconate 3 96.9 0.026 5.7E-07 42.5 11.0 144 1-152 62-246 (251)
215 PRK05693 short chain dehydroge 96.8 0.027 5.8E-07 42.9 10.7 136 1-142 51-234 (274)
216 PRK08589 short chain dehydroge 96.8 0.025 5.5E-07 43.1 10.5 146 1-152 61-250 (272)
217 smart00822 PKS_KR This enzymat 96.7 0.013 2.9E-07 40.9 8.0 90 1-95 60-179 (180)
218 PRK06940 short chain dehydroge 96.7 0.032 7E-07 42.6 10.5 150 1-152 56-261 (275)
219 PRK06949 short chain dehydroge 96.7 0.04 8.7E-07 41.4 10.7 143 1-151 65-254 (258)
220 PRK09072 short chain dehydroge 96.6 0.046 9.9E-07 41.3 10.8 125 1-141 60-222 (263)
221 PRK05855 short chain dehydroge 96.6 0.029 6.4E-07 47.2 10.6 137 1-142 371-549 (582)
222 PRK07792 fabG 3-ketoacyl-(acyl 96.6 0.18 3.9E-06 39.2 14.0 156 1-170 69-287 (306)
223 PRK08993 2-deoxy-D-gluconate 3 96.5 0.043 9.2E-07 41.3 10.0 143 1-151 64-247 (253)
224 PRK06484 short chain dehydroge 96.5 0.031 6.8E-07 46.7 10.0 145 1-152 322-505 (520)
225 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.045 9.7E-07 45.0 10.5 140 1-152 263-444 (450)
226 PRK06125 short chain dehydroge 96.5 0.091 2E-06 39.6 11.5 147 1-152 64-251 (259)
227 PRK07831 short chain dehydroge 96.4 0.05 1.1E-06 41.1 9.8 142 1-151 76-258 (262)
228 TIGR01831 fabG_rel 3-oxoacyl-( 96.4 0.037 8.1E-07 41.1 8.9 140 1-151 55-235 (239)
229 PRK12859 3-ketoacyl-(acyl-carr 96.4 0.058 1.3E-06 40.7 10.0 138 1-151 75-252 (256)
230 PRK07370 enoyl-(acyl carrier p 96.2 0.13 2.8E-06 38.9 11.3 142 1-152 66-251 (258)
231 PRK08177 short chain dehydroge 96.2 0.068 1.5E-06 39.4 9.6 93 1-96 52-182 (225)
232 PRK12367 short chain dehydroge 96.2 0.12 2.6E-06 39.0 10.6 114 1-141 65-212 (245)
233 PRK08690 enoyl-(acyl carrier p 96.1 0.094 2E-06 39.7 9.9 143 1-152 63-250 (261)
234 PRK07677 short chain dehydroge 96.1 0.079 1.7E-06 39.7 9.5 144 1-152 57-243 (252)
235 PRK06953 short chain dehydroge 96.0 0.28 6E-06 36.0 12.0 127 1-151 51-216 (222)
236 PRK07023 short chain dehydroge 96.0 0.057 1.2E-06 40.3 8.1 135 1-142 52-231 (243)
237 PRK06924 short chain dehydroge 95.9 0.041 8.8E-07 41.2 7.0 144 1-150 55-247 (251)
238 PRK06483 dihydromonapterin red 95.9 0.17 3.8E-06 37.4 10.3 141 1-152 53-231 (236)
239 PRK06079 enoyl-(acyl carrier p 95.9 0.083 1.8E-06 39.8 8.7 145 1-152 62-247 (252)
240 PRK08340 glucose-1-dehydrogena 95.8 0.18 3.9E-06 38.0 10.4 147 1-152 55-251 (259)
241 PRK07062 short chain dehydroge 95.8 0.089 1.9E-06 39.7 8.6 147 1-152 66-259 (265)
242 PRK05872 short chain dehydroge 95.8 0.11 2.3E-06 40.3 9.0 133 1-141 64-235 (296)
243 PRK06200 2,3-dihydroxy-2,3-dih 95.7 0.3 6.5E-06 36.8 11.2 146 1-152 59-255 (263)
244 PRK06197 short chain dehydroge 95.7 0.18 3.8E-06 39.2 10.0 96 1-97 74-216 (306)
245 PRK08415 enoyl-(acyl carrier p 95.7 0.18 4E-06 38.6 9.9 141 1-152 62-247 (274)
246 PRK09009 C factor cell-cell si 95.6 0.16 3.4E-06 37.6 9.3 135 1-151 50-229 (235)
247 COG0300 DltE Short-chain dehyd 95.5 0.42 9.1E-06 36.5 11.1 125 1-141 63-227 (265)
248 TIGR02685 pter_reduc_Leis pter 95.4 0.15 3.3E-06 38.6 8.6 84 65-157 170-264 (267)
249 PRK08945 putative oxoacyl-(acy 95.4 0.4 8.8E-06 35.7 10.8 111 14-142 91-233 (247)
250 PRK07533 enoyl-(acyl carrier p 95.4 0.2 4.3E-06 37.9 9.2 142 1-152 67-252 (258)
251 PRK06505 enoyl-(acyl carrier p 95.3 0.45 9.7E-06 36.3 11.0 141 1-152 64-249 (271)
252 PRK08159 enoyl-(acyl carrier p 95.3 0.29 6.2E-06 37.4 9.9 144 1-152 67-252 (272)
253 PRK07453 protochlorophyllide o 95.3 0.19 4.1E-06 39.3 9.0 25 1-25 62-93 (322)
254 PF03435 Saccharop_dh: Sacchar 95.3 0.044 9.5E-07 44.1 5.5 45 1-50 53-97 (386)
255 PRK07984 enoyl-(acyl carrier p 95.3 0.22 4.7E-06 37.9 9.1 152 1-161 63-258 (262)
256 PRK07424 bifunctional sterol d 95.2 0.63 1.4E-05 37.9 12.0 114 1-142 231-373 (406)
257 PRK06171 sorbitol-6-phosphate 95.2 0.22 4.7E-06 37.6 9.0 147 1-152 56-261 (266)
258 PRK06997 enoyl-(acyl carrier p 95.2 0.36 7.9E-06 36.5 10.0 144 1-152 63-249 (260)
259 PF13561 adh_short_C2: Enoyl-( 95.0 0.047 1E-06 40.8 4.6 141 1-152 51-238 (241)
260 PRK08594 enoyl-(acyl carrier p 95.0 0.44 9.4E-06 36.0 9.9 142 1-152 66-251 (257)
261 PRK08703 short chain dehydroge 94.9 1.1 2.3E-05 33.2 11.9 62 66-140 158-227 (239)
262 PRK07791 short chain dehydroge 94.9 0.77 1.7E-05 35.3 11.3 140 1-152 71-255 (286)
263 PRK05884 short chain dehydroge 94.9 1.1 2.4E-05 33.0 11.8 124 1-152 51-216 (223)
264 PTZ00325 malate dehydrogenase; 94.8 0.039 8.5E-07 43.3 3.9 44 5-49 66-122 (321)
265 PRK06484 short chain dehydroge 94.8 0.6 1.3E-05 39.1 11.1 133 1-140 58-231 (520)
266 TIGR01500 sepiapter_red sepiap 94.8 0.15 3.2E-06 38.4 7.0 136 1-140 62-243 (256)
267 PRK06603 enoyl-(acyl carrier p 94.7 0.37 8.1E-06 36.4 8.9 141 1-152 65-250 (260)
268 PF08732 HIM1: HIM1; InterPro 94.3 0.13 2.9E-06 41.0 5.6 80 13-98 201-303 (410)
269 PF08659 KR: KR domain; Inter 93.9 0.29 6.4E-06 35.0 6.5 87 1-93 60-177 (181)
270 PRK07889 enoyl-(acyl carrier p 93.6 0.71 1.5E-05 34.8 8.5 81 67-151 157-248 (256)
271 PRK05599 hypothetical protein; 93.5 2.4 5.3E-05 31.6 12.3 129 1-151 56-223 (246)
272 COG1748 LYS9 Saccharopine dehy 92.9 0.25 5.4E-06 39.8 5.2 44 1-49 54-97 (389)
273 KOG1201 Hydroxysteroid 17-beta 92.6 3.1 6.8E-05 32.3 10.4 122 1-141 93-256 (300)
274 PRK05854 short chain dehydroge 92.2 1.4 2.9E-05 34.5 8.5 96 1-98 72-214 (313)
275 KOG1610 Corticosteroid 11-beta 91.6 1.9 4.1E-05 33.7 8.3 91 2-99 84-216 (322)
276 TIGR03325 BphB_TodD cis-2,3-di 91.3 2.2 4.8E-05 32.1 8.7 145 1-152 58-253 (262)
277 KOG1205 Predicted dehydrogenas 91.2 5.4 0.00012 30.9 10.5 91 1-98 70-201 (282)
278 PRK08862 short chain dehydroge 91.1 3.8 8.2E-05 30.3 9.5 90 1-97 61-190 (227)
279 PLN00106 malate dehydrogenase 90.0 0.41 8.8E-06 37.8 3.6 44 5-49 76-132 (323)
280 KOG2733 Uncharacterized membra 89.6 0.59 1.3E-05 37.1 4.1 41 1-42 69-109 (423)
281 PLN02780 ketoreductase/ oxidor 87.9 6.4 0.00014 30.9 9.0 59 66-140 206-271 (320)
282 PRK08309 short chain dehydroge 87.6 1.3 2.8E-05 31.7 4.6 44 1-48 54-108 (177)
283 TIGR02813 omega_3_PfaA polyket 87.2 4.7 0.0001 40.6 9.2 90 1-96 2101-2222(2582)
284 TIGR00715 precor6x_red precorr 85.6 1.2 2.6E-05 33.9 3.7 45 2-47 50-96 (256)
285 PF10087 DUF2325: Uncharacteri 84.3 4.7 0.0001 25.6 5.5 40 8-48 41-80 (97)
286 PF00106 adh_short: short chai 82.9 11 0.00024 25.9 7.5 76 1-81 59-161 (167)
287 PLN02819 lysine-ketoglutarate 82.0 2.6 5.6E-05 38.6 4.8 25 2-26 635-659 (1042)
288 PRK08303 short chain dehydroge 81.9 20 0.00043 27.9 9.2 138 1-141 74-254 (305)
289 PRK08057 cobalt-precorrin-6x r 81.3 3.5 7.7E-05 31.2 4.7 44 3-47 51-96 (248)
290 PF02571 CbiJ: Precorrin-6x re 80.9 3.2 6.9E-05 31.5 4.3 44 4-48 53-98 (249)
291 KOG1200 Mitochondrial/plastidi 80.9 20 0.00043 26.4 8.9 72 76-152 179-252 (256)
292 TIGR01289 LPOR light-dependent 80.5 22 0.00047 27.7 9.1 25 1-25 60-91 (314)
293 PLN00015 protochlorophyllide r 80.3 22 0.00047 27.6 9.0 25 1-25 54-85 (308)
294 PRK05086 malate dehydrogenase; 80.1 2.8 6.2E-05 32.9 4.0 41 7-48 61-114 (312)
295 PRK06300 enoyl-(acyl carrier p 79.4 23 0.0005 27.6 8.8 83 67-152 191-283 (299)
296 KOG1210 Predicted 3-ketosphing 79.1 30 0.00064 27.4 9.6 130 1-140 91-259 (331)
297 TIGR02990 ectoine_eutA ectoine 78.0 27 0.00059 26.3 11.5 101 31-174 108-209 (239)
298 PF12683 DUF3798: Protein of u 76.4 11 0.00025 28.8 6.0 56 29-92 117-172 (275)
299 COG3268 Uncharacterized conser 74.3 5.2 0.00011 31.7 3.8 39 3-42 59-97 (382)
300 cd01336 MDH_cytoplasmic_cytoso 73.4 4.2 9.2E-05 32.1 3.3 22 6-27 69-90 (325)
301 COG2099 CobK Precorrin-6x redu 72.5 6 0.00013 30.0 3.7 45 4-49 53-99 (257)
302 PF14871 GHL6: Hypothetical gl 70.5 15 0.00033 24.9 5.0 44 5-49 1-63 (132)
303 KOG1611 Predicted short chain- 68.5 45 0.00097 25.2 7.3 34 63-96 166-206 (249)
304 cd04824 eu_ALAD_PBGS_cysteine_ 66.1 46 0.00099 26.2 7.3 57 125-184 219-276 (320)
305 COG1255 Uncharacterized protei 64.3 14 0.0003 24.5 3.6 48 2-54 59-106 (129)
306 COG4588 AcfC Accessory coloniz 63.6 21 0.00045 26.3 4.8 47 143-189 18-65 (252)
307 COG2875 CobM Precorrin-4 methy 63.0 64 0.0014 24.4 7.7 23 68-90 88-110 (254)
308 PF02608 Bmp: Basic membrane p 60.0 21 0.00045 27.9 4.7 40 1-45 169-213 (306)
309 PRK08223 hypothetical protein; 59.5 21 0.00046 27.8 4.6 45 6-51 108-152 (287)
310 PF03686 UPF0146: Uncharacteri 59.5 23 0.0005 23.9 4.2 42 2-48 59-100 (127)
311 PLN02730 enoyl-[acyl-carrier-p 59.2 85 0.0018 24.5 8.4 82 67-152 192-284 (303)
312 cd04823 ALAD_PBGS_aspartate_ri 59.1 56 0.0012 25.8 6.7 57 125-184 219-275 (320)
313 COG0569 TrkA K+ transport syst 58.1 27 0.00059 26.0 4.9 46 1-49 51-98 (225)
314 cd00704 MDH Malate dehydrogena 57.2 14 0.00029 29.3 3.3 34 8-41 69-115 (323)
315 PF12419 DUF3670: SNF2 Helicas 56.9 21 0.00045 24.4 3.8 55 122-189 62-119 (141)
316 cd00384 ALAD_PBGS Porphobilino 56.3 52 0.0011 25.9 6.1 57 125-184 214-270 (314)
317 KOG4169 15-hydroxyprostaglandi 54.9 33 0.00072 25.9 4.7 140 1-151 62-241 (261)
318 PF10678 DUF2492: Protein of u 54.1 17 0.00038 22.2 2.7 20 148-168 39-58 (78)
319 PF01113 DapB_N: Dihydrodipico 53.7 21 0.00046 23.7 3.4 38 7-48 59-96 (124)
320 PF06415 iPGM_N: BPG-independe 53.6 84 0.0018 23.5 6.7 46 2-48 9-64 (223)
321 TIGR03853 matur_matur probable 53.4 20 0.00044 21.8 2.8 23 155-177 16-38 (77)
322 TIGR03581 EF_0839 conserved hy 52.9 15 0.00033 27.2 2.6 50 7-57 167-216 (236)
323 PF02254 TrkA_N: TrkA-N domain 52.1 50 0.0011 21.1 5.0 46 1-48 47-93 (116)
324 KOG1208 Dehydrogenases with di 52.0 1.2E+02 0.0025 24.0 9.0 100 1-101 93-236 (314)
325 PF00899 ThiF: ThiF family; I 50.6 39 0.00085 22.6 4.4 40 6-49 83-122 (135)
326 COG0113 HemB Delta-aminolevuli 49.6 1.2E+02 0.0026 24.0 7.0 58 124-184 226-283 (330)
327 PRK08367 porA pyruvate ferredo 49.2 73 0.0016 26.0 6.3 96 72-170 276-373 (394)
328 PF07879 PHB_acc_N: PHB/PHA ac 49.1 53 0.0012 19.2 4.2 45 121-171 16-60 (64)
329 PRK09283 delta-aminolevulinic 48.9 63 0.0014 25.6 5.6 64 118-184 215-278 (323)
330 PRK13302 putative L-aspartate 48.8 26 0.00056 26.9 3.6 19 8-26 60-78 (271)
331 PRK04148 hypothetical protein; 48.7 44 0.00096 22.8 4.3 34 13-49 75-108 (134)
332 PRK13384 delta-aminolevulinic 48.4 81 0.0017 24.9 6.1 64 118-184 216-279 (322)
333 PRK14851 hypothetical protein; 48.4 46 0.00099 29.4 5.3 43 5-48 123-165 (679)
334 cd01078 NAD_bind_H4MPT_DH NADP 48.2 18 0.00039 25.9 2.5 24 2-25 84-107 (194)
335 TIGR02356 adenyl_thiF thiazole 48.1 51 0.0011 24.0 4.9 40 6-48 102-141 (202)
336 PRK14852 hypothetical protein; 47.4 45 0.00098 30.7 5.2 43 5-48 412-454 (989)
337 TIGR01758 MDH_euk_cyt malate d 46.9 24 0.00053 27.9 3.2 34 8-41 68-114 (324)
338 COG0462 PrsA Phosphoribosylpyr 46.8 95 0.0021 24.6 6.3 75 10-88 46-126 (314)
339 PRK15452 putative protease; Pr 46.2 54 0.0012 27.3 5.2 44 4-48 11-64 (443)
340 TIGR02649 true_RNase_BN ribonu 45.0 77 0.0017 24.6 5.7 44 6-50 214-267 (303)
341 PF05157 T2SE_Nter: Type II se 44.8 70 0.0015 20.1 4.7 36 154-190 65-101 (109)
342 PF03786 UxuA: D-mannonate deh 44.7 88 0.0019 25.2 5.9 44 4-48 12-63 (351)
343 cd03362 TOPRIM_TopoIA_TopoIII 44.5 54 0.0012 22.6 4.4 45 7-51 90-138 (151)
344 PRK05434 phosphoglyceromutase; 43.2 1.4E+02 0.0031 25.4 7.2 47 1-48 90-146 (507)
345 TIGR03693 ocin_ThiF_like putat 43.1 48 0.001 28.8 4.5 39 4-42 193-231 (637)
346 PRK09330 cell division protein 43.0 38 0.00083 27.5 3.8 38 5-42 87-127 (384)
347 PRK00048 dihydrodipicolinate r 42.8 47 0.001 25.2 4.1 34 6-42 51-84 (257)
348 PRK15007 putative ABC transpor 42.2 46 0.001 24.4 4.0 24 161-184 49-72 (243)
349 TIGR02355 moeB molybdopterin s 40.7 71 0.0015 24.0 4.8 42 6-50 105-146 (240)
350 PF04723 GRDA: Glycine reducta 40.6 73 0.0016 21.8 4.2 41 7-48 20-70 (150)
351 COG4464 CapC Capsular polysacc 40.3 1.6E+02 0.0034 22.2 6.2 23 28-51 19-41 (254)
352 COG1234 ElaC Metal-dependent h 40.2 88 0.0019 24.3 5.3 48 2-50 198-255 (292)
353 PLN03059 beta-galactosidase; P 40.1 94 0.002 28.2 5.9 59 29-95 59-122 (840)
354 COG0696 GpmI Phosphoglyceromut 39.6 1.5E+02 0.0033 25.0 6.7 48 1-49 89-146 (509)
355 PRK15010 ABC transporter lysin 39.3 57 0.0012 24.4 4.2 27 161-187 54-80 (260)
356 PF01408 GFO_IDH_MocA: Oxidore 38.9 45 0.00098 21.4 3.2 31 9-42 54-86 (120)
357 PF02593 dTMP_synthase: Thymid 38.6 1.7E+02 0.0036 21.9 6.7 68 4-87 40-107 (217)
358 COG1224 TIP49 DNA helicase TIP 38.6 1.2E+02 0.0026 24.8 5.7 73 109-184 31-103 (450)
359 PRK13957 indole-3-glycerol-pho 38.2 76 0.0017 24.1 4.5 43 5-48 113-156 (247)
360 COG2185 Sbm Methylmalonyl-CoA 38.1 71 0.0015 22.1 4.0 19 29-48 78-96 (143)
361 COG0623 FabI Enoyl-[acyl-carri 38.0 37 0.0008 25.7 2.8 27 1-27 63-96 (259)
362 PRK07688 thiamine/molybdopteri 38.0 75 0.0016 25.3 4.7 40 6-48 107-146 (339)
363 PRK09250 fructose-bisphosphate 37.9 2.2E+02 0.0047 23.0 12.2 40 8-48 151-197 (348)
364 cd02191 FtsZ FtsZ is a GTPase 37.5 69 0.0015 25.1 4.4 39 6-45 75-116 (303)
365 PF06068 TIP49: TIP49 C-termin 37.2 98 0.0021 25.3 5.2 62 122-184 27-88 (398)
366 PF01023 S_100: S-100/ICaBP ty 36.7 17 0.00038 19.4 0.7 28 161-188 7-34 (44)
367 PRK09622 porA pyruvate flavodo 36.6 1.4E+02 0.003 24.5 6.2 97 72-170 282-381 (407)
368 cd00757 ThiF_MoeB_HesA_family 36.4 91 0.002 23.1 4.8 40 6-48 102-141 (228)
369 cd06353 PBP1_BmpA_Med_like Per 36.3 66 0.0014 24.3 4.1 24 14-44 178-201 (258)
370 COG2100 Predicted Fe-S oxidore 36.3 1E+02 0.0022 24.7 4.9 57 31-88 203-260 (414)
371 PHA02099 hypothetical protein 36.0 25 0.00055 20.7 1.3 15 12-26 40-54 (84)
372 TIGR02651 RNase_Z ribonuclease 35.6 1.4E+02 0.003 23.0 5.8 48 2-50 208-265 (299)
373 PRK13265 glycine/sarcosine/bet 35.6 96 0.0021 21.3 4.2 40 8-48 22-71 (154)
374 PRK11260 cystine transporter s 35.5 71 0.0015 24.0 4.2 26 161-186 69-94 (266)
375 COG0826 Collagenase and relate 35.2 2.4E+02 0.0052 22.7 8.3 47 4-51 14-70 (347)
376 PRK08659 2-oxoglutarate ferred 35.1 2.5E+02 0.0053 22.8 7.8 86 74-169 290-375 (376)
377 TIGR01848 PHA_reg_PhaR polyhyd 35.1 1.3E+02 0.0028 19.6 5.3 60 121-188 16-75 (107)
378 PF08478 POTRA_1: POTRA domain 35.0 27 0.00058 20.1 1.4 42 146-190 4-45 (69)
379 PRK08328 hypothetical protein; 34.9 1E+02 0.0022 23.0 4.9 40 6-48 109-148 (231)
380 COG0206 FtsZ Cell division GTP 34.6 59 0.0013 26.0 3.6 38 5-42 85-125 (338)
381 PRK15437 histidine ABC transpo 34.5 76 0.0016 23.7 4.2 26 161-186 54-79 (259)
382 PRK12475 thiamine/molybdopteri 34.2 97 0.0021 24.7 4.8 40 6-48 107-146 (338)
383 cd01483 E1_enzyme_family Super 34.2 1.4E+02 0.0031 20.0 5.2 37 10-49 84-120 (143)
384 PRK08462 biotin carboxylase; V 34.1 88 0.0019 25.8 4.8 15 71-85 117-131 (445)
385 COG0075 Serine-pyruvate aminot 34.0 1.6E+02 0.0035 24.1 6.0 53 1-54 114-174 (383)
386 PF08915 tRNA-Thr_ED: Archaea- 33.9 1.6E+02 0.0034 20.3 5.1 62 30-97 59-122 (138)
387 PRK13304 L-aspartate dehydroge 33.9 61 0.0013 24.7 3.6 17 9-25 55-71 (265)
388 cd01028 TOPRIM_TopoIA TOPRIM_T 33.6 1E+02 0.0022 20.9 4.3 46 7-52 82-130 (142)
389 PRK13018 cell division protein 33.3 64 0.0014 26.3 3.7 37 6-42 103-142 (378)
390 TIGR01307 pgm_bpd_ind 2,3-bisp 32.6 1.4E+02 0.0031 25.3 5.7 47 1-48 86-142 (501)
391 PF11080 DUF2622: Protein of u 32.5 1E+02 0.0022 19.8 3.7 29 159-187 65-94 (96)
392 PF00490 ALAD: Delta-aminolevu 32.5 62 0.0013 25.6 3.3 58 124-184 223-280 (324)
393 PRK06732 phosphopantothenate-- 32.3 47 0.001 24.8 2.6 21 7-27 73-93 (229)
394 PRK09496 trkA potassium transp 31.9 1.2E+02 0.0026 24.8 5.3 46 1-49 282-328 (453)
395 TIGR02452 conserved hypothetic 31.8 58 0.0013 25.1 3.1 24 31-55 194-217 (266)
396 cd02201 FtsZ_type1 FtsZ is a G 31.4 74 0.0016 24.9 3.7 37 6-42 75-114 (304)
397 smart00846 Gp_dh_N Glyceraldeh 31.3 85 0.0018 21.7 3.6 43 5-51 77-119 (149)
398 PRK05597 molybdopterin biosynt 31.3 1E+02 0.0022 24.7 4.6 39 6-47 109-147 (355)
399 PRK09620 hypothetical protein; 31.3 28 0.0006 26.0 1.3 21 7-27 77-99 (229)
400 PRK09495 glnH glutamine ABC tr 31.2 89 0.0019 23.1 4.0 9 129-137 52-60 (247)
401 KOG1494 NAD-dependent malate d 31.1 90 0.002 24.5 3.9 24 4-27 85-108 (345)
402 TIGR02804 ExbD_2 TonB system t 30.5 1.6E+02 0.0035 19.3 5.0 21 27-48 96-116 (121)
403 TIGR00065 ftsZ cell division p 30.3 94 0.002 25.0 4.1 40 6-46 92-134 (349)
404 PF13793 Pribosyltran_N: N-ter 30.0 1.1E+02 0.0024 20.1 3.9 35 13-48 45-83 (116)
405 PRK08366 vorA 2-ketoisovalerat 29.6 2.7E+02 0.0058 22.8 6.7 93 73-170 275-371 (390)
406 PF08123 DOT1: Histone methyla 29.2 1.3E+02 0.0028 22.1 4.4 49 1-49 108-156 (205)
407 PF00218 IGPS: Indole-3-glycer 29.0 1.2E+02 0.0025 23.2 4.3 43 5-48 120-163 (254)
408 PRK07709 fructose-bisphosphate 28.9 2.8E+02 0.0061 21.6 7.2 88 5-96 89-182 (285)
409 TIGR01096 3A0103s03R lysine-ar 28.7 1E+02 0.0023 22.6 4.0 11 128-138 51-61 (250)
410 PRK05600 thiamine biosynthesis 28.6 1.2E+02 0.0027 24.5 4.6 39 6-47 122-160 (370)
411 TIGR03855 NAD_NadX aspartate d 28.6 1.2E+02 0.0027 22.7 4.3 12 14-25 36-47 (229)
412 PRK06702 O-acetylhomoserine am 28.6 2E+02 0.0042 23.9 5.8 46 2-49 132-183 (432)
413 cd02905 Macro_GDAP2_like Macro 28.6 1.4E+02 0.0031 20.3 4.3 36 15-51 68-115 (140)
414 PRK09496 trkA potassium transp 28.0 1.3E+02 0.0029 24.6 4.9 45 1-48 50-96 (453)
415 PTZ00023 glyceraldehyde-3-phos 27.8 69 0.0015 25.6 3.0 44 4-51 79-122 (337)
416 PRK08134 O-acetylhomoserine am 27.6 2.2E+02 0.0048 23.5 6.0 47 2-49 135-185 (433)
417 PRK08644 thiamine biosynthesis 27.1 1.6E+02 0.0035 21.6 4.7 39 7-48 109-148 (212)
418 cd06406 PB1_P67 A PB1 domain i 27.0 88 0.0019 19.3 2.7 26 147-173 12-37 (80)
419 KOG1321 Protoheme ferro-lyase 27.0 1.5E+02 0.0033 23.6 4.6 51 30-89 141-196 (395)
420 PRK05690 molybdopterin biosynt 26.9 1.6E+02 0.0034 22.3 4.7 39 6-47 113-151 (245)
421 PF00044 Gp_dh_N: Glyceraldehy 26.8 84 0.0018 21.9 3.0 43 5-51 78-120 (151)
422 COG0028 IlvB Thiamine pyrophos 26.8 4.2E+02 0.009 22.9 10.4 37 7-48 6-44 (550)
423 smart00812 Alpha_L_fucos Alpha 26.8 1.5E+02 0.0032 24.3 4.7 46 3-49 80-147 (384)
424 cd01487 E1_ThiF_like E1_ThiF_l 26.6 1.8E+02 0.0038 20.6 4.7 40 6-48 79-119 (174)
425 PRK13790 phosphoribosylamine-- 26.4 1E+02 0.0023 24.8 3.9 42 2-47 12-55 (379)
426 PF00056 Ldh_1_N: lactate/mala 26.4 97 0.0021 21.0 3.2 17 10-26 64-80 (141)
427 PRK07878 molybdopterin biosynt 26.2 1.5E+02 0.0032 24.2 4.7 39 6-47 123-161 (392)
428 cd03363 TOPRIM_TopoIA_TopoI TO 26.2 1.4E+02 0.0031 19.8 3.9 45 7-52 64-111 (123)
429 PRK00278 trpC indole-3-glycero 26.2 1.8E+02 0.004 22.1 5.0 43 5-48 122-165 (260)
430 TIGR01182 eda Entner-Doudoroff 26.1 1.5E+02 0.0033 21.7 4.3 36 1-42 65-101 (204)
431 cd05298 GH4_GlvA_pagL_like Gly 26.0 85 0.0018 26.1 3.3 20 7-26 66-85 (437)
432 PF10832 DUF2559: Protein of u 26.0 90 0.002 17.5 2.3 28 164-191 21-48 (54)
433 PRK07877 hypothetical protein; 26.0 1.7E+02 0.0038 26.1 5.3 41 5-48 186-226 (722)
434 COG2873 MET17 O-acetylhomoseri 26.0 2.2E+02 0.0047 23.4 5.4 46 2-48 133-182 (426)
435 PF08002 DUF1697: Protein of u 25.9 1.2E+02 0.0026 20.6 3.6 30 161-190 59-88 (137)
436 PRK13656 trans-2-enoyl-CoA red 25.9 76 0.0017 26.0 2.9 26 1-26 110-142 (398)
437 PRK08762 molybdopterin biosynt 25.5 1.6E+02 0.0034 23.8 4.7 39 7-48 217-255 (376)
438 PF03447 NAD_binding_3: Homose 25.5 1.9E+02 0.0041 18.5 4.5 38 9-51 51-90 (117)
439 PRK00055 ribonuclease Z; Revie 25.4 2.5E+02 0.0055 20.9 5.7 48 2-50 174-231 (270)
440 PRK10204 hypothetical protein; 25.3 74 0.0016 17.6 1.9 27 165-191 23-49 (55)
441 PF01116 F_bP_aldolase: Fructo 25.0 3.4E+02 0.0073 21.2 7.1 89 5-96 85-181 (287)
442 KOG0172 Lysine-ketoglutarate r 24.9 94 0.002 25.5 3.2 46 2-52 54-100 (445)
443 PRK02126 ribonuclease Z; Provi 24.9 1.7E+02 0.0038 23.2 4.8 42 8-50 260-311 (334)
444 PRK06418 transcription elongat 24.7 1.5E+02 0.0033 21.0 3.9 60 129-188 34-109 (166)
445 PRK05529 cell division protein 24.5 2.2E+02 0.0047 21.7 5.1 48 140-190 58-105 (255)
446 PRK07998 gatY putative fructos 24.5 3.4E+02 0.0075 21.1 6.5 88 5-96 86-179 (283)
447 cd01485 E1-1_like Ubiquitin ac 24.4 1.9E+02 0.0041 20.9 4.6 44 7-53 105-148 (198)
448 PLN02358 glyceraldehyde-3-phos 24.1 99 0.0021 24.7 3.3 42 5-50 85-126 (338)
449 PRK00436 argC N-acetyl-gamma-g 24.0 1.5E+02 0.0031 23.7 4.2 33 12-49 65-97 (343)
450 COG1419 FlhF Flagellar GTP-bin 23.9 4.2E+02 0.0091 21.9 6.7 75 108-190 202-278 (407)
451 PLN02968 Probable N-acetyl-gam 23.7 92 0.002 25.3 3.1 30 13-48 102-131 (381)
452 PRK06552 keto-hydroxyglutarate 23.7 1.9E+02 0.0041 21.4 4.5 14 81-94 127-140 (213)
453 PHA02105 hypothetical protein 23.6 1.3E+02 0.0027 17.2 2.7 30 160-189 26-56 (68)
454 PRK14837 undecaprenyl pyrophos 23.4 3.3E+02 0.0071 20.5 7.8 20 29-49 37-56 (230)
455 cd06411 PB1_p51 The PB1 domain 23.4 1.2E+02 0.0025 18.6 2.7 21 154-174 14-34 (78)
456 COG1744 Med Uncharacterized AB 23.3 1.8E+02 0.0038 23.3 4.6 28 14-46 219-246 (345)
457 cd05197 GH4_glycoside_hydrolas 23.2 1E+02 0.0022 25.5 3.3 20 7-26 66-85 (425)
458 PF01118 Semialdhyde_dh: Semia 23.2 1.2E+02 0.0026 19.8 3.2 33 12-49 63-95 (121)
459 PF10154 DUF2362: Uncharacteri 23.2 95 0.0021 26.4 3.1 35 13-48 385-431 (510)
460 PRK11579 putative oxidoreducta 23.1 1.2E+02 0.0025 24.1 3.6 40 8-48 55-120 (346)
461 TIGR03227 PhnS 2-aminoethylpho 23.0 3.9E+02 0.0085 21.3 6.9 30 159-188 54-83 (367)
462 PF05402 PqqD: Coenzyme PQQ sy 23.0 30 0.00065 19.9 0.2 49 126-189 14-62 (68)
463 PRK08610 fructose-bisphosphate 23.0 3.7E+02 0.008 21.0 7.2 88 5-96 89-182 (286)
464 PF01081 Aldolase: KDPG and KH 23.0 1.7E+02 0.0037 21.4 4.1 36 1-42 65-101 (196)
465 KOG1301 Vesicle trafficking pr 22.9 1.1E+02 0.0025 26.0 3.4 34 16-49 563-596 (621)
466 PRK06720 hypothetical protein; 22.9 1E+02 0.0023 21.6 2.9 33 16-48 65-98 (169)
467 PF03880 DbpA: DbpA RNA bindin 22.9 63 0.0014 19.2 1.6 13 125-137 13-25 (74)
468 PRK06015 keto-hydroxyglutarate 22.7 1.9E+02 0.0042 21.2 4.3 15 81-95 115-129 (201)
469 PF07075 DUF1343: Protein of u 22.5 1.6E+02 0.0035 23.8 4.2 39 10-49 73-117 (365)
470 cd00947 TBP_aldolase_IIB Tagat 22.5 3.7E+02 0.0081 20.8 6.9 89 5-97 81-175 (276)
471 PF01120 Alpha_L_fucos: Alpha- 22.4 1.7E+02 0.0036 23.4 4.3 45 4-49 91-157 (346)
472 PF00763 THF_DHG_CYH: Tetrahyd 22.3 1.2E+02 0.0025 20.0 2.9 17 155-171 68-84 (117)
473 COG0673 MviM Predicted dehydro 22.2 1.4E+02 0.0029 23.3 3.8 41 7-48 57-123 (342)
474 TIGR03025 EPS_sugtrans exopoly 22.2 2E+02 0.0044 23.7 4.9 42 6-48 177-220 (445)
475 TIGR02801 tolR TolR protein. T 22.2 2.4E+02 0.0053 18.6 4.7 30 18-48 96-125 (129)
476 TIGR03450 mycothiol_INO1 inosi 22.1 2E+02 0.0043 23.2 4.5 40 6-46 112-153 (351)
477 COG1869 RbsD ABC-type ribose t 22.1 1.9E+02 0.0042 19.7 3.8 28 160-188 82-109 (135)
478 PRK11797 D-ribose pyranase; Pr 21.8 2.4E+02 0.0052 19.3 4.4 62 126-189 50-114 (139)
479 COG1058 CinA Predicted nucleot 21.8 2.5E+02 0.0055 21.5 4.9 46 127-177 47-93 (255)
480 PRK05939 hypothetical protein; 21.8 3E+02 0.0064 22.5 5.7 45 2-48 117-166 (397)
481 PRK06806 fructose-bisphosphate 21.7 3.9E+02 0.0084 20.7 6.8 90 5-97 86-180 (281)
482 PF12327 FtsZ_C: FtsZ family, 21.7 2.2E+02 0.0048 17.9 4.8 48 129-177 15-72 (95)
483 COG3933 Transcriptional antite 21.6 4.9E+02 0.011 21.9 7.3 61 125-188 146-207 (470)
484 PF13407 Peripla_BP_4: Peripla 21.6 2.1E+02 0.0046 20.9 4.6 39 8-49 47-86 (257)
485 PRK05968 hypothetical protein; 21.5 3E+02 0.0065 22.3 5.7 46 2-49 134-183 (389)
486 cd08010 yceG_like proteins sim 21.5 3.1E+02 0.0068 20.8 5.4 18 154-171 34-51 (245)
487 COG0431 Predicted flavoprotein 21.4 1E+02 0.0022 22.1 2.6 36 6-41 58-96 (184)
488 PRK07119 2-ketoisovalerate fer 21.4 4.4E+02 0.0094 21.2 6.8 17 154-170 333-349 (352)
489 TIGR01772 MDH_euk_gproteo mala 21.3 1.8E+02 0.004 22.9 4.2 34 9-42 61-107 (312)
490 PF12674 Zn_ribbon_2: Putative 21.2 1.2E+02 0.0025 18.7 2.5 32 156-190 41-72 (81)
491 PTZ00145 phosphoribosylpyropho 21.1 5E+02 0.011 21.8 7.5 71 13-89 164-242 (439)
492 PRK07403 glyceraldehyde-3-phos 21.0 1.1E+02 0.0024 24.4 3.0 44 5-52 80-123 (337)
493 TIGR00514 accC acetyl-CoA carb 21.0 2.1E+02 0.0046 23.6 4.8 16 70-85 114-129 (449)
494 TIGR03603 cyclo_dehy_ocin bact 21.0 1.3E+02 0.0029 23.7 3.4 40 8-48 144-183 (318)
495 COG5252 Uncharacterized conser 20.9 3E+02 0.0066 20.9 4.9 61 121-184 134-219 (299)
496 PF02401 LYTB: LytB protein; 20.9 2.9E+02 0.0063 21.5 5.1 41 6-48 200-240 (281)
497 PF04468 PSP1: PSP1 C-terminal 20.8 2.2E+02 0.0048 17.6 4.2 23 154-176 63-85 (88)
498 PRK07729 glyceraldehyde-3-phos 20.6 1.8E+02 0.0039 23.4 4.1 44 5-52 79-122 (343)
499 TIGR00877 purD phosphoribosyla 20.6 2.2E+02 0.0048 23.2 4.8 15 71-85 104-118 (423)
500 TIGR01532 E4PD_g-proteo D-eryt 20.6 1.5E+02 0.0033 23.5 3.6 43 5-51 79-121 (325)
No 1
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.97 E-value=4.9e-30 Score=191.68 Aligned_cols=175 Identities=23% Similarity=0.387 Sum_probs=143.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---CcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---QFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~ 77 (191)
+|+.|.++|.++|+|+|+||++.+.. ..+...++++||+++| |||||+|+++..........|..+++..|..+|+
T Consensus 50 ~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 50 ADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp S-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccchhhhhhhhhhh
Confidence 68999999999999999999999854 3677899999999999 9999999988766443333456678889999999
Q ss_pred HHHhcCCCeEEEecccccccccccccC---CCCCCceEEEecCCcceeeec-chhhHHHHHHHHhcCcccC--CceeEee
Q 038413 78 AIEAVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGNGEAKAVFN-YEEDIAKCTIKVINDPRTC--NRIVIYR 151 (191)
Q Consensus 78 ~l~~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i-~~~Dva~~~~~~l~~~~~~--~~~~~i~ 151 (191)
+|++++++||++|||.|++|+...+.. .......+.++++++.+..++ +.+|+|++++.++.+|... ++.+.++
T Consensus 129 ~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~ 208 (233)
T PF05368_consen 129 YLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA 208 (233)
T ss_dssp HHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred hhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence 999999999999999999998764433 221233678888888777775 9999999999999998654 6888886
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
++.+|++|+++++++.+|++++|++
T Consensus 209 --~~~~t~~eia~~~s~~~G~~v~y~~ 233 (233)
T PF05368_consen 209 --GETLTYNEIAAILSKVLGKKVKYVQ 233 (233)
T ss_dssp --GGEEEHHHHHHHHHHHHTSEEEEEE
T ss_pred --CCCCCHHHHHHHHHHHHCCccEEeC
Confidence 5899999999999999999999874
No 2
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.95 E-value=6.3e-26 Score=176.74 Aligned_cols=175 Identities=23% Similarity=0.293 Sum_probs=139.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYL 69 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~ 69 (191)
||+.|++++.++++|+|+|||+++... ..++.++++||+++| |+|||. |+++... .+..++.
T Consensus 50 ~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~------~~~~~~~ 122 (317)
T CHL00194 50 GDLSLPETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ------YPYIPLM 122 (317)
T ss_pred CCCCCHHHHHHHHCCCCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc------cCCChHH
Confidence 699999999999999999999876431 345689999999999 999986 5554321 1234577
Q ss_pred HHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeE
Q 038413 70 EKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVI 149 (191)
Q Consensus 70 ~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~ 149 (191)
.+|.++|+++++++++||++||+.+++++...+..+........+ ++++.++++||++|+|++++.++.++...+++|+
T Consensus 123 ~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~n 201 (317)
T CHL00194 123 KLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFP 201 (317)
T ss_pred HHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEE
Confidence 899999999999999999999998887644332222222333333 4556778999999999999999998777799999
Q ss_pred eecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 150 YRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++| ++.+|++|+++++++.+|++..+..+|....
T Consensus 202 i~g-~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 202 LVG-PKSWNSSEIISLCEQLSGQKAKISRVPLFLL 235 (317)
T ss_pred ecC-CCccCHHHHHHHHHHHhCCCCeEEeCCHHHH
Confidence 996 7899999999999999999999998887655
No 3
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.94 E-value=1.1e-25 Score=172.88 Aligned_cols=175 Identities=15% Similarity=0.218 Sum_probs=138.3
Q ss_pred CCCCCHHHHHHhh------cc-CcEEEEccCCCC--cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHH
Q 038413 1 GELDEHEKIVSIL------KE-VDVVISTVAYPQ--FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLE 70 (191)
Q Consensus 1 gD~~d~~~l~~a~------~g-~d~V~~~~~~~~--~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~ 70 (191)
+|+.|+++|.+++ +| +|.||++++... .....++++||+++| |+|||. |+.+.... . .
T Consensus 46 ~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~-----~------~ 113 (285)
T TIGR03649 46 FDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG-----G------P 113 (285)
T ss_pred ccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC-----C------c
Confidence 5899999999999 67 999999887532 456789999999999 999986 44333211 0 1
Q ss_pred HHHHHHHHHHhc-CCCeEEEecccccccccccccCCCC-CCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCcee
Q 038413 71 KKRIVRRAIEAV-EIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV 148 (191)
Q Consensus 71 ~k~~~e~~l~~~-~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~ 148 (191)
.+..+++++++. |++||++||++|++++...+..... ..+.+ +.+.|+.+.++|+++|+|++++.++.++...++.+
T Consensus 114 ~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~ 192 (285)
T TIGR03649 114 AMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKVAPNTDY 192 (285)
T ss_pred hHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeE
Confidence 234567888885 9999999999999886432221111 33343 34567888999999999999999999887678888
Q ss_pred EeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 149 IYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 149 ~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
++.+ ++.+|+.|+++++++++|++++++.+|.+++.+.+.
T Consensus 193 ~l~g-~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~ 232 (285)
T TIGR03649 193 VVLG-PELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQ 232 (285)
T ss_pred EeeC-CccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHH
Confidence 8885 799999999999999999999999999999988765
No 4
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.90 E-value=7.4e-23 Score=163.39 Aligned_cols=176 Identities=18% Similarity=0.246 Sum_probs=139.5
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCc
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPF 65 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~ 65 (191)
+|++|.+++.++++ ++|+|||+++... ..++.+++++|++.| ++|||. |+.+.. .|.
T Consensus 118 ~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~-------~p~ 189 (390)
T PLN02657 118 GDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ-------KPL 189 (390)
T ss_pred eeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc-------Ccc
Confidence 68999999999998 5999999886421 345789999999999 999885 544322 234
Q ss_pred hhhHHHHHHHHHHHHh--cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee-eecchhhHHHHHHHHhcCcc
Q 038413 66 EAYLEKKRIVRRAIEA--VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA-VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~--~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+..+|..+|+++.+ ++++||++||+.|+++.... ......++.+.++|+|+.++ ++||++|+|++++.++.++.
T Consensus 190 ~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~-~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~ 268 (390)
T PLN02657 190 LEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQ-VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES 268 (390)
T ss_pred hHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHH-HHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc
Confidence 5677899999999986 79999999999998754322 12222455666788887654 67999999999999998877
Q ss_pred cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 143 TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 143 ~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
..+++++++++++.+|+.|+++++.+.+|++++++.+|...+.
T Consensus 269 ~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 269 KINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred ccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 6789999985236899999999999999999999999877654
No 5
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.90 E-value=1.5e-22 Score=154.77 Aligned_cols=178 Identities=18% Similarity=0.232 Sum_probs=135.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCc---ccCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEF---GCEE------ 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~---g~~~------ 56 (191)
||++|.+++.+|++|+|+|||+++... +++++||++||++++ |||||. ||. +.+.
T Consensus 52 ~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~ 130 (280)
T PF01073_consen 52 GDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPII 130 (280)
T ss_pred eccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcc
Confidence 699999999999999999999988642 578999999999999 999985 432 2200
Q ss_pred --CCCCC--CCCchhhHHHHHHHHHHHHhc-C--------CCeEEEecccccccccccccC----CCCCCceEEEecCCc
Q 038413 57 --DRVRP--LPPFEAYLEKKRIVRRAIEAV-E--------IPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGE 119 (191)
Q Consensus 57 --~~~~~--~~~~~~~~~~k~~~e~~l~~~-~--------~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~ 119 (191)
++... ..+...|..+|..+|+++.+. + +.+++|||+..+|++...+.. ....+......|++.
T Consensus 131 ~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~ 210 (280)
T PF01073_consen 131 NGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGN 210 (280)
T ss_pred cCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCC
Confidence 01110 113446788999999998752 2 788999999999876443321 111333566777788
Q ss_pred ceeeecchhhHHHHHHHHhc---Cc----ccCCceeEeecCCCccC-HHHHHHHHHHHhCCceEE-EEcC
Q 038413 120 AKAVFNYEEDIAKCTIKVIN---DP----RTCNRIVIYRPQTNIIS-QLELISLWEQKTGRSFKR-VHIS 180 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~---~~----~~~~~~~~i~~~~~~~t-~~e~~~~~~~~~g~~~~~-~~~~ 180 (191)
.+.+++|++|+|.+++.+++ ++ ...|+.|++++ +++++ +.|++..+.+.+|.+.+. +++|
T Consensus 211 ~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd-~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 211 NLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD-GEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC-CCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 88999999999999877654 33 35689999997 78888 999999999999988776 6666
No 6
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=1.7e-21 Score=145.44 Aligned_cols=178 Identities=19% Similarity=0.304 Sum_probs=135.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC----cccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE----FGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~----~g~~~~~- 58 (191)
||+.|.+.|.+.|+ ..|+|+|.++... +.++.+|+++|+++| |++||+|| ||.....
T Consensus 51 gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~P 129 (329)
T COG1087 51 GDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSP 129 (329)
T ss_pred eccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcc
Confidence 79999999999996 6899999998642 567899999999999 99999764 7764332
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccc---------c------ccccccCCCC-CCceEEEe
Q 038413 59 ---VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGA---------Y------FVNVLLRPFE-PHDDVVVY 115 (191)
Q Consensus 59 ---~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~---------~------~~~~~~~~~~-~~~~~~~~ 115 (191)
..+..|.+||.++|..+|+.|++ .++++++||.-...+ + ++|...+..+ +...+.++
T Consensus 130 I~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~if 209 (329)
T COG1087 130 ISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIF 209 (329)
T ss_pred cCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEe
Confidence 33346788999999999999986 589999999321111 0 1111111111 44557776
Q ss_pred c------CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 G------NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~------~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
| +|+.-+|+||+.|+|++.+.+|+.-+ ..+.++++++ +.-.|..|+++.+.+++|++++++..|
T Consensus 210 G~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~-G~G~SV~evi~a~~~vtg~~ip~~~~~ 281 (329)
T COG1087 210 GDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGS-GNGFSVLEVIEAAKKVTGRDIPVEIAP 281 (329)
T ss_pred CCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccC-CCceeHHHHHHHHHHHhCCcCceeeCC
Confidence 6 56677999999999999999987522 2236899996 899999999999999999998887544
No 7
>PLN00016 RNA-binding protein; Provisional
Probab=99.87 E-value=3.1e-21 Score=153.75 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=126.2
Q ss_pred HHHhh--ccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc-CC---cccCCCCCC-CCCCchhhHHHHHHHHHHHHh
Q 038413 9 IVSIL--KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDRVR-PLPPFEAYLEKKRIVRRAIEA 81 (191)
Q Consensus 9 l~~a~--~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~~~-~~~~~~~~~~~k~~~e~~l~~ 81 (191)
+.+++ .++|+|||+++. ...++.++++||+++| ++|||. |+ |+....... ...+..+. .+|..+|+++++
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~-~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~-~sK~~~E~~l~~ 198 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGK-DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPK-AGHLEVEAYLQK 198 (378)
T ss_pred HHhhhccCCccEEEeCCCC-CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCCc-chHHHHHHHHHH
Confidence 44444 579999998764 4567899999999999 999885 44 332111100 00112222 279999999999
Q ss_pred cCCCeEEEeccccccccccc-----ccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCc
Q 038413 82 VEIPYTFVSANCYGAYFVNV-----LLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 82 ~~~~~tilrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
.+++|+++||+.++++.... +......++.+.++++|++.++++|++|+|++++.++.++...++.|++++ ++.
T Consensus 199 ~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~-~~~ 277 (378)
T PLN00016 199 LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVS-DRA 277 (378)
T ss_pred cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecC-CCc
Confidence 99999999999999854211 111112445677788888889999999999999999998766679999995 788
Q ss_pred cCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 157 ISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 157 ~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
+|+.|+++.+++.+|++.+++.++.+
T Consensus 278 ~s~~el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 278 VTFDGMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred cCHHHHHHHHHHHhCCCCceeecCcc
Confidence 99999999999999998877665544
No 8
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.86 E-value=1.4e-20 Score=148.52 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=130.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED---- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~---- 57 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++.| +++||. |+ ||....
T Consensus 76 ~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 154 (348)
T PRK15181 76 GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKI 154 (348)
T ss_pred ccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCC
Confidence 689999999999999999999998532 456899999999999 999884 32 653221
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccCCCCCCceEEEecCCcceee
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.....|..+|..+|...|..+.. .+++++++||+..+++.... +......++.+.++++|.++++
T Consensus 155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd 234 (348)
T PRK15181 155 EERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRD 234 (348)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEe
Confidence 111224667888999999988753 58999999999998864211 1111125567788889999999
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
|+|++|+|++++.++..+. ..+++|++++ ++.+|+.|+++.+.+.++.
T Consensus 235 ~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 235 FCYIENVIQANLLSATTNDLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred eEEHHHHHHHHHHHHhcccccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence 9999999999988776432 3468999995 7999999999999999973
No 9
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.84 E-value=1.4e-19 Score=143.76 Aligned_cols=176 Identities=17% Similarity=0.235 Sum_probs=133.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.|.+.+.++++++|+|||+++... ..++.|++++|++.+ +++||. |+ ||....
T Consensus 71 ~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~ 149 (370)
T PLN02695 71 VDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLET 149 (370)
T ss_pred CCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCc
Confidence 588999999988999999999996431 345789999999999 999884 43 543211
Q ss_pred -----CC--CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccC-CCCCCceEEEe
Q 038413 58 -----RV--RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLR-PFEPHDDVVVY 115 (191)
Q Consensus 58 -----~~--~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~-~~~~~~~~~~~ 115 (191)
+. ....|..+|..+|..+|+.+.. .+++++++||+.++++.... +.. .......+.++
T Consensus 150 ~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (370)
T PLN02695 150 NVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMW 229 (370)
T ss_pred CCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEe
Confidence 11 1234566788899999988754 59999999999988863211 110 00123567788
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++|++.++|+|++|+++++..++.++ .++.|++++ ++.+|+.|+++.+.+.+|++.++..+|
T Consensus 230 g~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~~~ 291 (370)
T PLN02695 230 GDGKQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKHIP 291 (370)
T ss_pred CCCCeEEeEEeHHHHHHHHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCceecC
Confidence 89999999999999999999988764 357899985 789999999999999999876665543
No 10
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.81 E-value=6.9e-19 Score=142.64 Aligned_cols=176 Identities=19% Similarity=0.194 Sum_probs=130.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC------------------cccHHHHHHHHHHcCCcc-EEEc-C---CcccC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ------------------FLDQLKIVHAIKVAGNIK-RFLP-S---EFGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~------------------~~~~~~li~aa~~~g~vk-r~v~-s---~~g~~ 55 (191)
+|+.|.+.+.++++ ++|+|||+++... +.++.+++++|++.| ++ |||. | .||..
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC
Confidence 68999999999998 5899999985421 346799999999999 86 7773 3 26642
Q ss_pred C---CC-----------C---CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc------------
Q 038413 56 E---DR-----------V---RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL------------ 102 (191)
Q Consensus 56 ~---~~-----------~---~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~------------ 102 (191)
. ++ . ....|..+|..+|...|..++. .|++++++||+..+|.+....
T Consensus 199 ~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~ 278 (442)
T PLN02572 199 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDY 278 (442)
T ss_pred CCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCc
Confidence 1 00 0 1224566788999999888754 499999999999988652210
Q ss_pred -----------cCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCC--ceeEeecCCCccCHHHHHHHHHHH
Q 038413 103 -----------LRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCN--RIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 103 -----------~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~--~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
......++.+.++|+|++.++|+|++|+|++++.+++++...+ ..++++ ++.+|+.|+++++.+.
T Consensus 279 ~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig--s~~~si~el~~~i~~~ 356 (442)
T PLN02572 279 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF--TEQFSVNELAKLVTKA 356 (442)
T ss_pred ccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC--CCceeHHHHHHHHHHH
Confidence 0001134567788899999999999999999999998753223 468886 4789999999999999
Q ss_pred ---hCCceEEEEc
Q 038413 170 ---TGRSFKRVHI 179 (191)
Q Consensus 170 ---~g~~~~~~~~ 179 (191)
+|++..+...
T Consensus 357 ~~~~g~~~~~~~~ 369 (442)
T PLN02572 357 GEKLGLDVEVISV 369 (442)
T ss_pred HHhhCCCCCeeeC
Confidence 8877665544
No 11
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.2e-18 Score=129.81 Aligned_cols=172 Identities=18% Similarity=0.210 Sum_probs=138.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-EEEc-C---CcccCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-RFLP-S---EFGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-r~v~-s---~~g~~~~- 57 (191)
||+.|.+.+.+.|+ ..|+|+|.|+... +.++.+|++|+++.. .+ ||+. | .||.-..
T Consensus 58 ~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 58 GDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred ccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCC
Confidence 79999999999998 5899999998653 467899999999998 54 7773 3 3664222
Q ss_pred -----CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc------cccccCCCCCCceEEEecCCccee
Q 038413 58 -----RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF------VNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 58 -----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+..+..|.+||.++|..+...+++ .|++.+|.||+.-+++. +|....-.+.+.+++++|+|.+.+
T Consensus 137 ~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iR 216 (340)
T COG1088 137 DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIR 216 (340)
T ss_pred CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCccee
Confidence 233457889999999888777765 69999999998766642 222222234788999999999999
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
+|++++|-++++-.+|...+. |++|+|+| +...+..|++++|.+.+|+..+
T Consensus 217 DWl~VeDh~~ai~~Vl~kg~~-GE~YNIgg-~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 217 DWLYVEDHCRAIDLVLTKGKI-GETYNIGG-GNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred eeEEeHhHHHHHHHHHhcCcC-CceEEeCC-CccchHHHHHHHHHHHhCcccc
Confidence 999999999999999998764 99999996 7899999999999999997544
No 12
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.80 E-value=3.5e-18 Score=131.29 Aligned_cols=170 Identities=18% Similarity=0.189 Sum_probs=127.4
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCC---
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~--- 56 (191)
+|+.|.+++.++++++ |+|||+++... ..++.+++++|++.+ + +|| .|+ |+...
T Consensus 34 ~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~ 111 (287)
T TIGR01214 34 LDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRP 111 (287)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCC
Confidence 5899999999999876 99999998632 235789999999998 6 665 343 43211
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccc-c----ccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVN-V----LLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~-~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.+.....|...|..+|..+|++++..+++++++||+.+++.... . +......++.+.+.+ +..+++++++|+
T Consensus 112 ~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dv 189 (287)
T TIGR01214 112 YREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDL 189 (287)
T ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHH
Confidence 11222245667889999999999988999999999999876421 1 111112334555554 356899999999
Q ss_pred HHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 131 AKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
|+++..++.++...++.+++++ ++.+|+.|+++.+.+.+|++..
T Consensus 190 a~a~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 190 ARVIAALLQRLARARGVYHLAN-SGQCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred HHHHHHHHhhccCCCCeEEEEC-CCCcCHHHHHHHHHHHhCcccc
Confidence 9999999988655688999996 7899999999999999997643
No 13
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.79 E-value=2.6e-18 Score=146.07 Aligned_cols=172 Identities=16% Similarity=0.214 Sum_probs=130.8
Q ss_pred CCCCCHHHHHHhh--ccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSIL--KEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~--~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
||+.|.+.+..++ .++|+|||+++... +.++.+++++|++.|.++|||. |+ ||....
T Consensus 64 ~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~ 143 (668)
T PLN02260 64 GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA 143 (668)
T ss_pred CCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc
Confidence 6899988888776 58999999998643 2457899999999865899884 43 553211
Q ss_pred -----CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc------ccccCCCCCCceEEEecCCccee
Q 038413 58 -----RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV------NVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 58 -----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+.....|..+|..+|..+|+++++ .+++++++||+.+++... +.+......++.+.++++|++.+
T Consensus 144 ~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r 223 (668)
T PLN02260 144 DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR 223 (668)
T ss_pred ccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence 111223567788999999998864 589999999999887532 11111112456678888898899
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+|||++|+|+++..++..+. .++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 224 ~~ihV~Dva~a~~~~l~~~~-~~~vyni~~-~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 224 SYLYCEDVAEAFEVVLHKGE-VGHVYNIGT-KKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred eeEEHHHHHHHHHHHHhcCC-CCCEEEECC-CCeeEHHHHHHHHHHHhCCCC
Confidence 99999999999999887653 468999985 789999999999999999753
No 14
>PLN02427 UDP-apiose/xylose synthase
Probab=99.79 E-value=3.1e-18 Score=136.95 Aligned_cols=169 Identities=18% Similarity=0.280 Sum_probs=125.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++++ +|||. |+ ||... .
T Consensus 72 ~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~ 149 (386)
T PLN02427 72 INIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLP 149 (386)
T ss_pred cCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCC
Confidence 689999999999999999999997421 234688999998876 67773 43 55321 0
Q ss_pred CCCC----------------------CCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------
Q 038413 58 RVRP----------------------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV---------- 101 (191)
Q Consensus 58 ~~~~----------------------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~---------- 101 (191)
+... ..|.++|..+|..+|+++.. .+++++++||+..++.....
T Consensus 150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~ 229 (386)
T PLN02427 150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 229 (386)
T ss_pred cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccc
Confidence 0000 01234688899999999865 58999999999988864210
Q ss_pred ---cc----CCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc-cCCceeEeecCC-CccCHHHHHHHHHHHhCC
Q 038413 102 ---LL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIYRPQT-NIISQLELISLWEQKTGR 172 (191)
Q Consensus 102 ---~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~~~-~~~t~~e~~~~~~~~~g~ 172 (191)
+. .....++.+.+++++.+.++|||++|+|++++.+++++. ..++.|++++ + +.+|+.|+++++.+.+|.
T Consensus 230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~-~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGN-PNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCC-CCCCccHHHHHHHHHHHhcc
Confidence 00 001245567788888888999999999999999998864 4568899985 5 589999999999999985
No 15
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.79 E-value=4.5e-18 Score=134.45 Aligned_cols=169 Identities=16% Similarity=0.206 Sum_probs=127.9
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHH---------cCCccEEEc-CC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKV---------AGNIKRFLP-SE-- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~---------~g~vkr~v~-s~-- 51 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++ .+ +++|+. |+
T Consensus 58 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~ 136 (355)
T PRK10217 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDE 136 (355)
T ss_pred CCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchh
Confidence 589999999999984 899999998632 3567899999986 35 778773 43
Q ss_pred -cccCC------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--c----ccCCCCCCceEEE
Q 038413 52 -FGCEE------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--V----LLRPFEPHDDVVV 114 (191)
Q Consensus 52 -~g~~~------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~----~~~~~~~~~~~~~ 114 (191)
||... .+.....|.++|..+|..+|..+.. .+++++++||+.+++++.. . +......++.+.+
T Consensus 137 vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 216 (355)
T PRK10217 137 VYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPV 216 (355)
T ss_pred hcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceE
Confidence 55311 1111224567788999999888753 5899999999998886531 1 1111124456778
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+++|+++++|+|++|+|+++..++..+. .++.|++++ ++.+|+.|+++.+.+.+|+
T Consensus 217 ~g~g~~~~~~i~v~D~a~a~~~~~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 217 YGNGQQIRDWLYVEDHARALYCVATTGK-VGETYNIGG-HNERKNLDVVETICELLEE 272 (355)
T ss_pred eCCCCeeeCcCcHHHHHHHHHHHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhcc
Confidence 8899999999999999999999998753 468899996 7899999999999999985
No 16
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.79 E-value=6.5e-18 Score=133.24 Aligned_cols=172 Identities=22% Similarity=0.236 Sum_probs=125.1
Q ss_pred CCCC-CHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELD-EHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~-d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+. +.+.+.++++++|+|||+++... +.++.+++++|++.+ +|||. |+ ||....
T Consensus 53 ~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~ 130 (347)
T PRK11908 53 GDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF 130 (347)
T ss_pred CCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc
Confidence 5886 67788888999999999987421 355789999999987 46663 33 553211
Q ss_pred -CC-CC------CCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------------cCCCCCCce
Q 038413 58 -RV-RP------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------------LRPFEPHDD 111 (191)
Q Consensus 58 -~~-~~------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------------~~~~~~~~~ 111 (191)
+. .. ..|.++|..+|..+|+++.. .+++++++||+.+++.+...+ ......++.
T Consensus 131 ~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 210 (347)
T PRK11908 131 DPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEP 210 (347)
T ss_pred CccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCc
Confidence 11 10 12445688899999988864 689999999998888642110 000114456
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+.++++|++.++|||++|+|+++..++.++. ..++.|+++++.+.+|+.|+++.+.+.+|...
T Consensus 211 ~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 211 ISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred eEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 6777788889999999999999999998753 45789999852257999999999999999643
No 17
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.78 E-value=1.4e-17 Score=129.26 Aligned_cols=170 Identities=19% Similarity=0.269 Sum_probs=126.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-EEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-RFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-r~v~-s~---~g~~~-- 56 (191)
+|+.|++++.+++++ +|+|||+++... ..++.+++++|++.+ ++ +++. |+ ||...
T Consensus 57 ~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~ 135 (317)
T TIGR01181 57 GDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKG 135 (317)
T ss_pred cCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCC
Confidence 589999999999987 899999998532 245688999999875 43 6663 43 44321
Q ss_pred ---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--cc----cCCCCCCceEEEecCCcceee
Q 038413 57 ---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VL----LRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 57 ---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~----~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+.....|...|..+|..+|.+++. .+++++++||+.+++.... .+ ......++.+.+++++++.++
T Consensus 136 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 215 (317)
T TIGR01181 136 DAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRD 215 (317)
T ss_pred CCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEe
Confidence 1112223455688899999988763 5899999999988875321 11 111114455777888888899
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
++|++|+|+++..+++++ ..++.|++++ ++.+|+.|+++++.+.+|++
T Consensus 216 ~i~v~D~a~~~~~~~~~~-~~~~~~~~~~-~~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 216 WLYVEDHCRAIYLVLEKG-RVGETYNIGG-GNERTNLEVVETILELLGKD 263 (317)
T ss_pred eEEHHHHHHHHHHHHcCC-CCCceEEeCC-CCceeHHHHHHHHHHHhCCC
Confidence 999999999999999864 3468899985 78999999999999999975
No 18
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.77 E-value=3.8e-17 Score=126.52 Aligned_cols=175 Identities=17% Similarity=0.108 Sum_probs=125.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
+|+.|.+++.++++ ++|+|||+++... ..++.+++++|++.+ ++|||. |+ ||....
T Consensus 33 ~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~ 111 (306)
T PLN02725 33 LDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQ 111 (306)
T ss_pred CCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCC
Confidence 68999999999887 5799999996421 346789999999999 999884 43 442211
Q ss_pred ---CCC----CCCCch-hhHHHHHHHHHHHH----hcCCCeEEEeccccccccccc----------ccC----CCCCCce
Q 038413 58 ---RVR----PLPPFE-AYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNV----------LLR----PFEPHDD 111 (191)
Q Consensus 58 ---~~~----~~~~~~-~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~----------~~~----~~~~~~~ 111 (191)
+.. ...|.. .|..+|..+|+.++ ..+++++++||+.+++..... ... ....+..
T Consensus 112 ~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 191 (306)
T PLN02725 112 PIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAP 191 (306)
T ss_pred CCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCC
Confidence 110 112333 37788998887664 358999999999988864211 000 0012233
Q ss_pred EEE-ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 112 VVV-YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 112 ~~~-~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
+.+ +++|++.+++||++|+++++..+++++. ..+.+++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 192 ~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~~ 257 (306)
T PLN02725 192 EVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELVW 257 (306)
T ss_pred eEEEcCCCCeeeccccHHHHHHHHHHHHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCceee
Confidence 344 6778888999999999999999998753 245678985 7899999999999999997655543
No 19
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.77 E-value=3.1e-17 Score=126.90 Aligned_cols=167 Identities=15% Similarity=0.146 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccC----
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCE---- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~---- 55 (191)
||+.|.+.+.++++ ++|+|||+++... ..++.+++++|++.| + +|| .|+ ||..
T Consensus 38 ~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p 115 (299)
T PRK09987 38 GDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCC
Confidence 69999999999998 5899999998642 345789999999999 7 455 343 4322
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccccc----cCCCCCCceEEEecC--Ccceeeecchhh
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVL----LRPFEPHDDVVVYGN--GEAKAVFNYEED 129 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~----~~~~~~~~~~~~~~~--g~~~~~~i~~~D 129 (191)
..+.....|..+|..+|..+|+++.....+++++|+++.+++...++ ......++.+.++++ |.....+...+|
T Consensus 116 ~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~ 195 (299)
T PRK09987 116 WQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADC 195 (299)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHH
Confidence 12222345677888999999999988778899999999987543222 111124556777776 444445555667
Q ss_pred HHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 130 IAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 130 va~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
+++++..++..+.. .++|++++ ++.+|+.|+++.+.+.++
T Consensus 196 ~~~~~~~~~~~~~~-~giyni~~-~~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 196 TAHAIRVALNKPEV-AGLYHLVA-SGTTTWHDYAALVFEEAR 235 (299)
T ss_pred HHHHHHHhhccCCC-CCeEEeeC-CCCccHHHHHHHHHHHHH
Confidence 78777777765432 46899996 789999999999977643
No 20
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.76 E-value=3.2e-17 Score=129.51 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=127.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHc---------CCccEEEc-CC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVA---------GNIKRFLP-SE-- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~---------g~vkr~v~-s~-- 51 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++. + +++||. |+
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i~~SS~~ 135 (352)
T PRK10084 57 ADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFHHISTDE 135 (352)
T ss_pred ecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEEEecchh
Confidence 58999999999996 4899999998532 35689999999874 4 678773 33
Q ss_pred -cccCC--------------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--ccc----CCC
Q 038413 52 -FGCEE--------------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VLL----RPF 106 (191)
Q Consensus 52 -~g~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~~----~~~ 106 (191)
||... .+.....|...|..+|..+|.+++. .+++++++|++.+++.... .+. ...
T Consensus 136 vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~ 215 (352)
T PRK10084 136 VYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNA 215 (352)
T ss_pred hcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHH
Confidence 55311 1111224566788999999988764 4899999999988875421 111 101
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
..++.+.++++|++.+++||++|+|+++..+++++. .++.|++++ ++..|..|+++.+.+.+|+.
T Consensus 216 ~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 216 LEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK-AGETYNIGG-HNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred hcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCceEEeCC-CCcCcHHHHHHHHHHHhccc
Confidence 134567788889999999999999999999988643 478999985 78999999999999999863
No 21
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.76 E-value=1.2e-16 Score=125.57 Aligned_cols=178 Identities=15% Similarity=0.238 Sum_probs=125.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+.+.++++ ++|+|||+++... ..+..+++++|++.| +++||. |+ ||...
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~ 135 (338)
T PRK10675 57 GDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIP 135 (338)
T ss_pred ccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCc
Confidence 58899999999886 6899999987532 235689999999999 999884 43 44211
Q ss_pred -CCCCCC-CCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccc-----------c-ccc----CCCC-CCceE
Q 038413 57 -DRVRPL-PPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFV-----------N-VLL----RPFE-PHDDV 112 (191)
Q Consensus 57 -~~~~~~-~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~-----------~-~~~----~~~~-~~~~~ 112 (191)
++.... .|..+|..+|..+|+++++ .+++++++|++..++... + .+. .... ....+
T Consensus 136 ~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (338)
T PRK10675 136 YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL 215 (338)
T ss_pred cccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCce
Confidence 111111 3566788899999998864 368899999755444210 0 000 0000 12234
Q ss_pred EEec------CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 113 VVYG------NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 113 ~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+++ +|.+.+++||++|+|++++.+++.. ...+++|++++ ++.+|+.|+++++.+.+|++.++...|
T Consensus 216 ~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T PRK10675 216 AIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_pred EEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeeeCC
Confidence 4444 5677899999999999999998752 23458999985 789999999999999999887766544
No 22
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.76 E-value=8.8e-18 Score=135.81 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=121.0
Q ss_pred HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCC----CCC-----C
Q 038413 9 IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEE----DRV-----R 60 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~----~~~-----~ 60 (191)
+..++.++|+|||+++... +.++.+++++|+++| + +|| .|+ ||... ++. .
T Consensus 178 ~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 178 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred ccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCC
Confidence 3445678999999997421 456799999999999 7 565 343 55321 111 1
Q ss_pred CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--------cccCCCCCCceEEEecCCcceeeecchh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--------VLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
+..|...|..+|..+|+.+.. .+++++++||+.+++.... .+......++.+.++|++++.++|+|++
T Consensus 256 p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~ 335 (436)
T PLN02166 256 PIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS 335 (436)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence 122445688899999998764 4899999999988886421 1111112456777888888899999999
Q ss_pred hHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 129 DIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
|++++++.+++.+. ++.|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 336 Dva~ai~~~~~~~~--~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~ 382 (436)
T PLN02166 336 DLVDGLVALMEGEH--VGPFNLGN-PGEFTMLELAEVVKETIDSSATIEF 382 (436)
T ss_pred HHHHHHHHHHhcCC--CceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeee
Confidence 99999999987643 46899985 7899999999999999998765544
No 23
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.75 E-value=8.6e-17 Score=126.70 Aligned_cols=170 Identities=14% Similarity=0.172 Sum_probs=122.6
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc---EEEc-CC---cccCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK---RFLP-SE---FGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk---r~v~-s~---~g~~~ 56 (191)
||+.|.+.+.+++++ +|+|||+++... ..++.+++++|++.| ++ +||. |+ ||...
T Consensus 62 ~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 62 GDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred eccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCC
Confidence 689999999999985 699999998632 236789999999988 74 6663 43 66321
Q ss_pred ----CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-ccC--------CCCCCc-eEEEecCC
Q 038413 57 ----DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-LLR--------PFEPHD-DVVVYGNG 118 (191)
Q Consensus 57 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~~~--------~~~~~~-~~~~~~~g 118 (191)
.+.....|.++|..+|..+|.+++. .+++++..|+...++++... +.. ....++ ...++|+|
T Consensus 141 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 220 (343)
T TIGR01472 141 EIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNL 220 (343)
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCC
Confidence 1222234677889999999988854 47888877754444332111 110 001222 34466888
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++.++|+|++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|++.
T Consensus 221 ~~~rd~i~V~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~~ 273 (343)
T TIGR01472 221 DAKRDWGHAKDYVEAMWLMLQQDK--PDDYVIAT-GETHSVREFVEVSFEYIGKTL 273 (343)
T ss_pred ccccCceeHHHHHHHHHHHHhcCC--CccEEecC-CCceeHHHHHHHHHHHcCCCc
Confidence 899999999999999999998753 36799996 799999999999999999764
No 24
>PLN02214 cinnamoyl-CoA reductase
Probab=99.75 E-value=5.9e-17 Score=127.60 Aligned_cols=164 Identities=12% Similarity=0.090 Sum_probs=119.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CC----cccCC-------CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SE----FGCEE-------DR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~----~g~~~-------~~ 58 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|+++| ++|||. |+ ||... ++
T Consensus 67 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E 145 (342)
T PLN02214 67 ADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDE 145 (342)
T ss_pred cCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCc
Confidence 589999999999999999999998642 456899999999999 999874 33 33211 11
Q ss_pred CC------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccccc-----C--CCCCCceEEEecCCcce
Q 038413 59 VR------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLL-----R--PFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 59 ~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~-----~--~~~~~~~~~~~~~g~~~ 121 (191)
.. ...|..+|..+|..+|+++.. .+++++++||+..++....... . ..+.+.. ... ++..
T Consensus 146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~-~~~--~~~~ 222 (342)
T PLN02214 146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSA-KTY--ANLT 222 (342)
T ss_pred ccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc-ccC--CCCC
Confidence 10 012445678899999988764 5899999999999986532110 0 0011211 122 3446
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++|||++|+|++++.+++++.. ++.++++ ++.+|+.|+++++.+.++
T Consensus 223 ~~~i~V~Dva~a~~~al~~~~~-~g~yn~~--~~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 223 QAYVDVRDVALAHVLVYEAPSA-SGRYLLA--ESARHRGEVVEILAKLFP 269 (342)
T ss_pred cCeeEHHHHHHHHHHHHhCccc-CCcEEEe--cCCCCHHHHHHHHHHHCC
Confidence 8999999999999999988654 4568887 367899999999999996
No 25
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.75 E-value=6.4e-17 Score=137.35 Aligned_cols=180 Identities=11% Similarity=0.044 Sum_probs=128.7
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
||+.|+ +.+.++ +++|+|||+++... ++++.+++++|++.+ +++|+. |+ ||....
T Consensus 58 ~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~ 135 (657)
T PRK07201 58 GDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGV 135 (657)
T ss_pred cccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCc
Confidence 577773 455554 89999999997532 567899999999999 999884 43 432211
Q ss_pred --CCC---CCCCchhhHHHHHHHHHHHHh-cCCCeEEEeccccccccccc-------------cc-CCCCCCceEEEecC
Q 038413 58 --RVR---PLPPFEAYLEKKRIVRRAIEA-VEIPYTFVSANCYGAYFVNV-------------LL-RPFEPHDDVVVYGN 117 (191)
Q Consensus 58 --~~~---~~~~~~~~~~~k~~~e~~l~~-~~~~~tilrp~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~ 117 (191)
+.. ...+..+|..+|.++|+++.+ .+++++++||+.+++..... .. ........+.+++.
T Consensus 136 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (657)
T PRK07201 136 FREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGP 215 (657)
T ss_pred cccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccC
Confidence 110 012345688999999999985 68999999999988742110 00 00001122334455
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce---EEEEcCHHH
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF---KRVHISEEE 183 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~---~~~~~~~~~ 183 (191)
+....++++++|+++++..++..+...++.|++++ ++.+|+.|+++.+.+.+|.+. .+..+|...
T Consensus 216 ~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~ 283 (657)
T PRK07201 216 DGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTD-PKPQRVGDIYNAFARAAGAPPDARLFGFLPGFV 283 (657)
T ss_pred CCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCC-CCCCcHHHHHHHHHHHhCCCccccccccCChHH
Confidence 55668999999999999999887666688999996 799999999999999999987 666666543
No 26
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.75 E-value=5.7e-17 Score=137.53 Aligned_cols=170 Identities=20% Similarity=0.241 Sum_probs=125.0
Q ss_pred CCCCCHHH-HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----
Q 038413 1 GELDEHEK-IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~-l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~---- 56 (191)
||++|.+. +.++++++|+|||+++... +.++.++++||+++| +|||. |+ ||...
T Consensus 367 gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~ 444 (660)
T PRK08125 367 GDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYF 444 (660)
T ss_pred ccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCc
Confidence 68888655 6778999999999987432 356789999999987 57763 43 55321
Q ss_pred CCCCC------C-CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------------cCCCCCCce
Q 038413 57 DRVRP------L-PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------------LRPFEPHDD 111 (191)
Q Consensus 57 ~~~~~------~-~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------------~~~~~~~~~ 111 (191)
++... . .|.++|..+|..+|+++.. .+++++++||+.+++++.... ......++.
T Consensus 445 ~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 524 (660)
T PRK08125 445 DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524 (660)
T ss_pred CccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCC
Confidence 11110 0 1334688999999999864 589999999999887642110 001114556
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC-ccCHHHHHHHHHHHhCCc
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN-IISQLELISLWEQKTGRS 173 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~ 173 (191)
+.++++|++.++|||++|+|++++.+++++. ..++.|++++ ++ .+|+.|+++++.+.+|.+
T Consensus 525 i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~-~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 525 IKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGN-PDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred eEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCC-CCCceeHHHHHHHHHHHhccC
Confidence 7788888999999999999999999998753 3467899985 54 799999999999999964
No 27
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.74 E-value=3.5e-17 Score=132.56 Aligned_cols=166 Identities=17% Similarity=0.204 Sum_probs=120.4
Q ss_pred HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC----CCC-----
Q 038413 9 IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED----RVR----- 60 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~----~~~----- 60 (191)
+..++.++|+|||+++... +.++.+++++|++.| + ||| .|+ ||.... +..
T Consensus 177 ~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 254 (442)
T PLN02206 177 VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVN 254 (442)
T ss_pred cChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCC
Confidence 3445678999999997431 456799999999999 7 565 343 543211 110
Q ss_pred CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--------cccCCCCCCceEEEecCCcceeeecchh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--------VLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
+..+...|..+|..+|+.+.. .+++++++||+.+++.... .+......++.+.++++|++.++|+|++
T Consensus 255 P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~ 334 (442)
T PLN02206 255 PIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 334 (442)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence 112245678899999998764 5899999999888876421 1111112456678888998899999999
Q ss_pred hHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 129 DIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
|+|++++.+++.+ .++.|++++ ++.+|+.|+++.+.+.+|.+.++...
T Consensus 335 Dva~ai~~a~e~~--~~g~yNIgs-~~~~sl~Elae~i~~~~g~~~~i~~~ 382 (442)
T PLN02206 335 DLVEGLMRLMEGE--HVGPFNLGN-PGEFTMLELAKVVQETIDPNAKIEFR 382 (442)
T ss_pred HHHHHHHHHHhcC--CCceEEEcC-CCceeHHHHHHHHHHHhCCCCceeeC
Confidence 9999999998764 246899995 78999999999999999876655443
No 28
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.74 E-value=9.4e-17 Score=124.73 Aligned_cols=173 Identities=13% Similarity=0.132 Sum_probs=121.9
Q ss_pred CCCCCHHHHHHhh----ccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC--
Q 038413 1 GELDEHEKIVSIL----KEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~----~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~-- 57 (191)
+|+.+.+.+..+. .++|+|||+++... +.++.+++++|++.+ + +|| .|+ |+....
T Consensus 48 ~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~ 125 (314)
T TIGR02197 48 DYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGF 125 (314)
T ss_pred ccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCc
Confidence 3667777776655 48999999998532 356789999999999 7 565 343 442211
Q ss_pred -CC-CCCCCchhhHHHHHHHHHHHHh------cCCCeEEEeccccccccccc------cc----CCCCCCceEEEe----
Q 038413 58 -RV-RPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNV------LL----RPFEPHDDVVVY---- 115 (191)
Q Consensus 58 -~~-~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~------~~----~~~~~~~~~~~~---- 115 (191)
+. ....|..+|..+|..+|.++++ .+++++++||+..++..... +. .....++.+.++
T Consensus 126 ~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (314)
T TIGR02197 126 REGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSE 205 (314)
T ss_pred ccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCcc
Confidence 11 1123566788899999988764 25789999999888754211 00 001133344443
Q ss_pred --cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 116 --GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 116 --~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
++|+++++++|++|+++++..++.. ..+++|++++ ++.+|+.|+++.+.+.+|++.++..
T Consensus 206 ~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 267 (314)
T TIGR02197 206 GFKDGEQLRDFVYVKDVVDVNLWLLEN--GVSGIFNLGT-GRARSFNDLADAVFKALGKDEKIEY 267 (314)
T ss_pred ccCCCCceeeeEEHHHHHHHHHHHHhc--ccCceEEcCC-CCCccHHHHHHHHHHHhCCCCccee
Confidence 4677889999999999999999987 2467999986 7899999999999999997754333
No 29
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.74 E-value=1.3e-16 Score=121.97 Aligned_cols=167 Identities=12% Similarity=0.055 Sum_probs=116.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCcc------cCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEFG------CEEDRV 59 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~g------~~~~~~ 59 (191)
+|+.|.+++.+|++|||.|||++++.. +.++.|+++||++..+|||+|. ||.. ......
T Consensus 64 aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~ 143 (327)
T KOG1502|consen 64 ADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGEN 143 (327)
T ss_pred ccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCC
Confidence 699999999999999999999998753 4678999999999988999885 4321 111111
Q ss_pred CCC-CCc-----------hhhHHHHHHHH----HHHHhcCCCeEEEecccccccccccccCC------CCCCceEEEecC
Q 038413 60 RPL-PPF-----------EAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAYFVNVLLRP------FEPHDDVVVYGN 117 (191)
Q Consensus 60 ~~~-~~~-----------~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~~~~~~~~~------~~~~~~~~~~~~ 117 (191)
... +.. ..|..+|.-+| ++..+.+++.+.+.|+...|+.+...... .+-++....+.
T Consensus 144 ~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~- 222 (327)
T KOG1502|consen 144 SVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP- 222 (327)
T ss_pred cccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-
Confidence 100 111 23545665555 44566799999999999999765442110 11122222221
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+....|||++|||++.+.+++.|++.+|++ +. ++..++.|+++++.+....
T Consensus 223 -n~~~~~VdVrDVA~AHv~a~E~~~a~GRyi-c~--~~~~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 223 -NFWLAFVDVRDVALAHVLALEKPSAKGRYI-CV--GEVVSIKEIADILRELFPD 273 (327)
T ss_pred -CCceeeEeHHHHHHHHHHHHcCcccCceEE-Ee--cCcccHHHHHHHHHHhCCC
Confidence 223459999999999999999998766544 43 4788899999999998864
No 30
>PLN02240 UDP-glucose 4-epimerase
Probab=99.73 E-value=5.4e-16 Score=122.45 Aligned_cols=178 Identities=15% Similarity=0.212 Sum_probs=126.0
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|++|.+.+.++++ ++|+|||+++... +.++.+++++|++.+ +++||. |+ ||...
T Consensus 65 ~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~ 143 (352)
T PLN02240 65 VDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVP 143 (352)
T ss_pred cCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC
Confidence 58999999999886 6899999987532 245689999999999 999874 43 43211
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccc----------------cccCCCC-CCceEE
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVN----------------VLLRPFE-PHDDVV 113 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~----------------~~~~~~~-~~~~~~ 113 (191)
++.....|..+|..+|..+|+++++ .+++.+++|+...++...+ .+..... ....+.
T Consensus 144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T PLN02240 144 CTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT 223 (352)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence 1122234566788999999999863 3577888997655542110 0000000 112344
Q ss_pred Eec------CCcceeeecchhhHHHHHHHHhcC----cccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 114 VYG------NGEAKAVFNYEEDIAKCTIKVIND----PRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 114 ~~~------~g~~~~~~i~~~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++| +|.++++|||++|+|++++.++.. +...++.|++++ ++.+|+.|+++++++.+|++.++...+
T Consensus 224 ~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 299 (352)
T PLN02240 224 VFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLKLAP 299 (352)
T ss_pred EeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCceeCC
Confidence 554 678889999999999998888864 234468999986 799999999999999999877776543
No 31
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.73 E-value=2.7e-16 Score=122.60 Aligned_cols=177 Identities=17% Similarity=0.276 Sum_probs=127.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..+++++|++.+ +++++. |+ ||....
T Consensus 54 ~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~ 132 (328)
T TIGR01179 54 GDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIP 132 (328)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCC
Confidence 58899999999986 6899999998531 345688999999999 999875 32 332211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccccccc---------------CCCC-CCceEEE
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLL---------------RPFE-PHDDVVV 114 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~---------------~~~~-~~~~~~~ 114 (191)
+.....|..+|..+|..+|.++.. .+++++++||+.+++....... .... ..+.+.+
T Consensus 133 ~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
T TIGR01179 133 ISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTI 212 (328)
T ss_pred ccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEE
Confidence 111223456788899999988764 5899999999888775321110 0000 1223333
Q ss_pred e------cCCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 115 Y------GNGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 115 ~------~~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
+ ++|+.++++||++|+|+++..++... ...++.|++++ ++.+|..|+++.+.+.+|++.++...
T Consensus 213 ~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~-~~~~s~~ei~~~~~~~~g~~~~~~~~ 284 (328)
T TIGR01179 213 FGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGY-GQGFSVLEVIEAFKKVSGVDFPVELA 284 (328)
T ss_pred eCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCC-CCcccHHHHHHHHHHHhCCCcceEeC
Confidence 3 25567789999999999999998753 24578999985 78999999999999999998776543
No 32
>PLN02686 cinnamoyl-CoA reductase
Probab=99.73 E-value=1.3e-16 Score=126.74 Aligned_cols=174 Identities=11% Similarity=0.006 Sum_probs=121.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC-----cccC--C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE-----FGCE--E 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~-----~g~~--~ 56 (191)
+|+.|.+++.++++++|.|||+++... .+++.+++++|++. + |+|||. |+ ||.. .
T Consensus 114 ~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~ 192 (367)
T PLN02686 114 ANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPH 192 (367)
T ss_pred cCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCC
Confidence 589999999999999999999987421 34578999999986 7 999884 33 3211 0
Q ss_pred C------CCC------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc-c--CCCCCCceEEEecC
Q 038413 57 D------RVR------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL-L--RPFEPHDDVVVYGN 117 (191)
Q Consensus 57 ~------~~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 117 (191)
. +.. ...|..+|..+|..+|+++.. .|++++++||+.+++++.... . ......+...++++
T Consensus 193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~ 272 (367)
T PLN02686 193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLAD 272 (367)
T ss_pred CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCC
Confidence 0 100 012344678899999998753 589999999999998753210 0 00011122345555
Q ss_pred CcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
|. .+++|++|+|++++.+++.+ ...++.| +++ ++.+|+.|+++.+.+.+|++......
T Consensus 273 g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~~~ 332 (367)
T PLN02686 273 GL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKIAG 332 (367)
T ss_pred CC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcCCC
Confidence 53 57999999999999999853 2335556 664 78999999999999999987655443
No 33
>PRK05865 hypothetical protein; Provisional
Probab=99.72 E-value=1e-16 Score=137.15 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=116.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKR 73 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~ 73 (191)
+|+.|.+++.++++++|+|||+++... ..++.+++++|++.| ++|||. |+.. |.
T Consensus 47 gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------------K~ 107 (854)
T PRK05865 47 ADIRDATAVESAMTGADVVAHCAWVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------------QP 107 (854)
T ss_pred eeCCCHHHHHHHHhCCCEEEECCCcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------------HH
Confidence 589999999999999999999997542 466899999999999 999885 3311 78
Q ss_pred HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecC
Q 038413 74 IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQ 153 (191)
Q Consensus 74 ~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~ 153 (191)
++|+++.+++++++++||+.+++...+.+.... ....+...|+++..++|||++|+|+++..+++.+...++.|++++
T Consensus 108 aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~l-l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs- 185 (854)
T PRK05865 108 RVEQMLADCGLEWVAVRCALIFGRNVDNWVQRL-FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA- 185 (854)
T ss_pred HHHHHHHHcCCCEEEEEeceEeCCChHHHHHHH-hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC-
Confidence 889999889999999999999986533322111 111222234456678999999999999999976554578899996
Q ss_pred CCccCHHHHHHHHHHHh
Q 038413 154 TNIISQLELISLWEQKT 170 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~ 170 (191)
++.+|+.|+++.+.+..
T Consensus 186 g~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 186 PGELTFRRIAAALGRPM 202 (854)
T ss_pred CCcccHHHHHHHHhhhh
Confidence 78999999999998753
No 34
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.72 E-value=1.3e-16 Score=114.89 Aligned_cols=130 Identities=25% Similarity=0.331 Sum_probs=98.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC----CCCC-chhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR----PLPP-FEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~----~~~~-~~~~~~~k 72 (191)
||+.|++++.++++|+|+||++++... .+..++++++|+++| ++|++. |+.+....... ...+ ...++..|
T Consensus 46 ~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (183)
T PF13460_consen 46 GDLFDPDSVKAALKGADAVIHAAGPPPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDK 124 (183)
T ss_dssp SCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHH
T ss_pred eeehhhhhhhhhhhhcchhhhhhhhhcccccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHH
Confidence 689999999999999999999998644 566799999999999 999875 55554332211 0011 23567889
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
.++|+.+++++++||++||++++++... ... .+..++....++|+++|+|++++.+++|
T Consensus 125 ~~~e~~~~~~~~~~~ivrp~~~~~~~~~--------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 125 REAEEALRESGLNWTIVRPGWIYGNPSR--------SYR-LIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHHHHHHHHSTSEEEEEEESEEEBTTSS--------SEE-EESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCEEEEECcEeEeCCCc--------cee-EEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999987411 111 1222445567999999999999999875
No 35
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.72 E-value=3.9e-16 Score=121.07 Aligned_cols=171 Identities=20% Similarity=0.238 Sum_probs=126.7
Q ss_pred CCCCCHHHHHHhhccC-cEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccC----
Q 038413 1 GELDEHEKIVSILKEV-DVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE---- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~-d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~---- 55 (191)
+|+.|.+.+.++++++ |+|||+++... ++++.+++++|++.+ ++|+|. |+ ++..
T Consensus 49 ~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~ 127 (314)
T COG0451 49 LDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPL 127 (314)
T ss_pred ecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCC
Confidence 4677888888888888 99999998642 345799999999999 999885 33 2221
Q ss_pred -CCCC-CCCCCchhhHHHHHHHHHHHHhc----CCCeEEEecccccccccccc----cCC-----CCCCc-eEEEecCCc
Q 038413 56 -EDRV-RPLPPFEAYLEKKRIVRRAIEAV----EIPYTFVSANCYGAYFVNVL----LRP-----FEPHD-DVVVYGNGE 119 (191)
Q Consensus 56 -~~~~-~~~~~~~~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~~~~~~~----~~~-----~~~~~-~~~~~~~g~ 119 (191)
..+. ....|..+|..+|..+|+.+.+. +++++++||+.+++.+.... ... ..... ...+.+++.
T Consensus 128 ~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
T COG0451 128 PIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGS 207 (314)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCc
Confidence 1111 12234456788999999998863 69999999998887542211 110 11233 355666778
Q ss_pred ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCC-ccCHHHHHHHHHHHhCCceE
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTN-IISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~~~ 175 (191)
..++++|++|++++++.+++++... .+++++ ++ .+|.+|+++.+.+.+|.+..
T Consensus 208 ~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~-~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 208 QTRDFVYVDDVADALLLALENPDGG--VFNIGS-GTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred eeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCC-CCCcEEHHHHHHHHHHHhCCCCc
Confidence 8889999999999999999997644 889985 55 89999999999999998755
No 36
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.72 E-value=1e-16 Score=125.25 Aligned_cols=163 Identities=16% Similarity=0.145 Sum_probs=115.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CCcc-----cCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SEFG-----CEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~~g-----~~~--- 56 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+.+ ...
T Consensus 63 ~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~ 141 (322)
T PLN02986 63 ADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEA 141 (322)
T ss_pred cCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCC
Confidence 589999999999999999999998531 34578999999985 7 999884 4322 110
Q ss_pred ----CCCCCC------CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC--C-----CCCCceEEEe
Q 038413 57 ----DRVRPL------PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR--P-----FEPHDDVVVY 115 (191)
Q Consensus 57 ----~~~~~~------~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~--~-----~~~~~~~~~~ 115 (191)
++.... .+...|..+|..+|.++.+ .+++++++||+.++++....... . ...+.. .+
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~ 219 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LF 219 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CC
Confidence 000000 1234577899988877653 68999999999998864321100 0 011211 12
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
+.+.++|||++|+|++++.+++++... +.|+++ ++.+|+.|+++++.+.++
T Consensus 220 --~~~~~~~v~v~Dva~a~~~al~~~~~~-~~yni~--~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 220 --NNRFYRFVDVRDVALAHIKALETPSAN-GRYIID--GPIMSVNDIIDILRELFP 270 (322)
T ss_pred --CCcCcceeEHHHHHHHHHHHhcCcccC-CcEEEe--cCCCCHHHHHHHHHHHCC
Confidence 244579999999999999999987543 478886 578999999999999987
No 37
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.71 E-value=4.4e-16 Score=120.87 Aligned_cols=153 Identities=12% Similarity=0.101 Sum_probs=109.9
Q ss_pred cCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC----CCCCCCCchhhHHHHH
Q 038413 15 EVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED----RVRPLPPFEAYLEKKR 73 (191)
Q Consensus 15 g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~----~~~~~~~~~~~~~~k~ 73 (191)
++|+|||+++... ..++.+++++|++.+ ++ || .|+ ||.... +.....|..+|..+|.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 145 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF 145 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence 6899999986421 345789999999999 75 66 344 553211 1122346677889999
Q ss_pred HHHHHHHh----cCCCeEEEeccccccccccc--cc--------CCCCCCceEEEe-cCCcceeeecchhhHHHHHHHHh
Q 038413 74 IVRRAIEA----VEIPYTFVSANCYGAYFVNV--LL--------RPFEPHDDVVVY-GNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 74 ~~e~~l~~----~~~~~tilrp~~~~~~~~~~--~~--------~~~~~~~~~~~~-~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
.+|+++++ .+++++++||+..++.+... .. .....+....++ ++++.+++|+|++|+|++++.++
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~ 225 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW 225 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence 99988765 48999999999888854211 00 001123333344 55677899999999999999988
Q ss_pred cCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 139 NDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 139 ~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+.+ .+++|++++ ++.+|+.|+++.+.+.+|.
T Consensus 226 ~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 226 ENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred hcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 764 257899985 7889999999999999985
No 38
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.69 E-value=4.2e-16 Score=116.19 Aligned_cols=150 Identities=22% Similarity=0.365 Sum_probs=115.4
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC-
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~- 58 (191)
+|+.|.+.+.+++++. |+|||+++... +....+++++|++.+ ++||+. |+ |+.....
T Consensus 49 ~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~ 127 (236)
T PF01370_consen 49 GDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEP 127 (236)
T ss_dssp SETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSS
T ss_pred eeccccccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 5888999999999876 99999998741 456799999999999 888774 32 5543111
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc---cc-c-cc----CCCCCCceEEEecCCccee
Q 038413 59 ---VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF---VN-V-LL----RPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 59 ---~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~---~~-~-~~----~~~~~~~~~~~~~~g~~~~ 122 (191)
.....|..+|..+|...|+++++ .+++++++||+..+++. .. . +. .....++.+.+++++++.+
T Consensus 128 ~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (236)
T PF01370_consen 128 IDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVR 207 (236)
T ss_dssp BETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCcc
Confidence 11224566788899999998875 48999999999999876 11 1 00 0011556689999999999
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
+++|++|+|+++..+++++...++.|+|+
T Consensus 208 ~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 208 DFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999999999999987678999884
No 39
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.69 E-value=2e-15 Score=117.80 Aligned_cols=175 Identities=15% Similarity=0.145 Sum_probs=123.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-----R 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-----~ 58 (191)
+|+.|.+++.++++++|+|||+++... ..++.+++++|++.+ ++++|. |+ |+.... +
T Consensus 50 ~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e 128 (328)
T TIGR03466 50 GDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADE 128 (328)
T ss_pred eeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCc
Confidence 589999999999999999999986431 356789999999999 999884 33 442111 1
Q ss_pred CCCCCC---chhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----C-CCCCceEEEecCCcceeeec
Q 038413 59 VRPLPP---FEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----P-FEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 59 ~~~~~~---~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~-~~~~~~~~~~~~g~~~~~~i 125 (191)
.....| ..+|..+|...|+.+++ .+++++++||+.+++........ . .......... +...+++
T Consensus 129 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i 205 (328)
T TIGR03466 129 TTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLV 205 (328)
T ss_pred cCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceE
Confidence 111111 23567889999888765 58999999999988754221100 0 0011111222 2346899
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
|++|+|+++..++.++. .++.++++ ++.+|+.|+++.+.+.+|++.+...+|..
T Consensus 206 ~v~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T TIGR03466 206 HVDDVAEGHLLALERGR-IGERYILG--GENLTLKQILDKLAEITGRPAPRVKLPRW 259 (328)
T ss_pred EHHHHHHHHHHHHhCCC-CCceEEec--CCCcCHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 99999999999998754 46677775 58899999999999999998777777654
No 40
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.69 E-value=1.7e-15 Score=118.20 Aligned_cols=164 Identities=13% Similarity=0.106 Sum_probs=115.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CC-----cccCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SE-----FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~-----~g~~~--- 56 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+ |+...
T Consensus 62 ~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~ 140 (322)
T PLN02662 62 ANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTP 140 (322)
T ss_pred ccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCC
Confidence 588999999999999999999997521 35678999999987 8 999884 43 22111
Q ss_pred ----CCCCCCCC------chhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCC-------CCCCceEEEe
Q 038413 57 ----DRVRPLPP------FEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRP-------FEPHDDVVVY 115 (191)
Q Consensus 57 ----~~~~~~~~------~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~-------~~~~~~~~~~ 115 (191)
++.....| ..+|..+|..+|+++. +.+++++++||+.++++........ ...+.. .
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~- 217 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--T- 217 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--c-
Confidence 00000112 1357788998888764 3699999999999988643211000 001111 1
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
.++..++|||++|+|++++.+++++... +.++++ ++.+|+.|+++++.+.++.
T Consensus 218 -~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~--g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 218 -FPNASYRWVDVRDVANAHIQAFEIPSAS-GRYCLV--ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred -CCCCCcCeEEHHHHHHHHHHHhcCcCcC-CcEEEe--CCCCCHHHHHHHHHHHCCC
Confidence 1245689999999999999999987543 467776 4789999999999998863
No 41
>PLN02650 dihydroflavonol-4-reductase
Probab=99.69 E-value=1.3e-15 Score=120.39 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=114.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE------ 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~------ 56 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.+.++|||. |+ ++...
T Consensus 63 ~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~ 142 (351)
T PLN02650 63 ADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVY 142 (351)
T ss_pred ecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCcc
Confidence 589999999999999999999997531 2457899999998764688874 43 22110
Q ss_pred CCCC---------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCCC-------CCCceEEEec
Q 038413 57 DRVR---------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRPF-------EPHDDVVVYG 116 (191)
Q Consensus 57 ~~~~---------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~~-------~~~~~~~~~~ 116 (191)
++.. ...|.++|..+|..+|.++.. .|++++++||+..++++........ ..++. ..++
T Consensus 143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~ 221 (351)
T PLN02650 143 DEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYS 221 (351)
T ss_pred CcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccC
Confidence 1110 001234688899999987753 5899999999998886432111000 01111 1122
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
. ...++|+|++|+|++++.+++++... ..| +++ ++.+|+.|+++++.+.++
T Consensus 222 ~-~~~r~~v~V~Dva~a~~~~l~~~~~~-~~~-i~~-~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 222 I-IKQGQFVHLDDLCNAHIFLFEHPAAE-GRY-ICS-SHDATIHDLAKMLREKYP 272 (351)
T ss_pred c-CCCcceeeHHHHHHHHHHHhcCcCcC-ceE-Eec-CCCcCHHHHHHHHHHhCc
Confidence 1 23479999999999999999876533 355 553 688999999999999886
No 42
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.68 E-value=1.2e-15 Score=119.37 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=118.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~ 64 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.| +++||. |+... ..|
T Consensus 60 ~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~-------~~p 131 (324)
T TIGR03589 60 GDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA-------ANP 131 (324)
T ss_pred ccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC-------CCC
Confidence 699999999999999999999998532 346789999999999 999885 43211 134
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc---ccccCCCCCCc-eEEEecCCcceeeecchhhHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV---NVLLRPFEPHD-DVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~---~~~~~~~~~~~-~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
..+|..+|..+|.+++. .|++++++||+.++++.. +.+......+. .+.+. +++..++|+|++|++++
T Consensus 132 ~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a 210 (324)
T TIGR03589 132 INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNF 210 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHH
Confidence 56788999999988743 589999999999988531 22111111222 34444 56778999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++.+++... .++.+ +++ ++..|..|+++.+.+..+.
T Consensus 211 ~~~al~~~~-~~~~~-~~~-~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 211 VLKSLERML-GGEIF-VPK-IPSMKITDLAEAMAPECPH 246 (324)
T ss_pred HHHHHhhCC-CCCEE-ccC-CCcEEHHHHHHHHHhhCCe
Confidence 999998743 34555 553 5789999999999997643
No 43
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.68 E-value=2.3e-15 Score=118.37 Aligned_cols=168 Identities=14% Similarity=0.153 Sum_probs=116.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCC-----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEE----- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~----- 56 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+ ||...
T Consensus 66 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~-~~~~v~~SS~~~~g~~~~~~~~ 144 (338)
T PLN00198 66 ADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKS-VKRVILTSSAAAVSINKLSGTG 144 (338)
T ss_pred cCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeecceeeeccCCCCCC
Confidence 689999999999999999999998531 34567899999886 6 889874 33 44211
Q ss_pred ---CCC---------CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC------C-CCCCceEE
Q 038413 57 ---DRV---------RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR------P-FEPHDDVV 113 (191)
Q Consensus 57 ---~~~---------~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~------~-~~~~~~~~ 113 (191)
++. ....|..+|..+|..+|.++.. .+++++++||+..+++....... . ...+..+.
T Consensus 145 ~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T PLN00198 145 LVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFL 224 (338)
T ss_pred ceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccc
Confidence 010 0113456788999999987764 58999999999998874321100 0 01222333
Q ss_pred Eec-CCc----ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 114 VYG-NGE----AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 114 ~~~-~g~----~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+.| .+. ..++|+|++|+|++++.++..+... +.+ +++ ++.+|+.|+++++.+.++.
T Consensus 225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~-~~~-~~~-~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKESAS-GRY-ICC-AANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred cccccccccccCCcceeEHHHHHHHHHHHhhCcCcC-CcE-EEe-cCCCCHHHHHHHHHHHCCC
Confidence 333 222 2379999999999999999876433 345 443 5789999999999999863
No 44
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.67 E-value=2.9e-15 Score=117.83 Aligned_cols=169 Identities=12% Similarity=0.131 Sum_probs=119.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-----EEEc-CC---ccc
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-----RFLP-SE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-----r~v~-s~---~g~ 54 (191)
+|+.|.+.+.+++++ .|+|||+++... ..++.+++++|++.+ ++ +||. |+ ||.
T Consensus 67 ~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~ 145 (340)
T PLN02653 67 GDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGS 145 (340)
T ss_pred ecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCC
Confidence 589999999999975 699999998632 345789999999998 75 7763 32 554
Q ss_pred CC---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-cccC--------CCCCCceE-EEecC
Q 038413 55 EE---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-VLLR--------PFEPHDDV-VVYGN 117 (191)
Q Consensus 55 ~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-~~~~--------~~~~~~~~-~~~~~ 117 (191)
.. .+.....|...|..+|..+|.+++. .+++++..|+...+++... .+.. ....+... .++|+
T Consensus 146 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 225 (340)
T PLN02653 146 TPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGN 225 (340)
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCC
Confidence 22 1222234667788999999998864 4677666664333322111 1100 00122233 34588
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
|++.++|+|++|+|++++.++..+. ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus 226 g~~~rd~i~v~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 226 LDASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred CcceecceeHHHHHHHHHHHHhcCC--CCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence 8899999999999999999998753 46799996 79999999999999999964
No 45
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.66 E-value=1.5e-15 Score=112.88 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=138.6
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhH
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYL 69 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~ 69 (191)
|+.|++++.++++.+.+||++.|... ..+...|...|+++| |.|||. |..|.+. ...+.+.
T Consensus 117 d~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv------~s~Sr~L 189 (391)
T KOG2865|consen 117 DLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANV------KSPSRML 189 (391)
T ss_pred CCCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccc------cChHHHH
Confidence 78999999999999999999999642 355688999999999 999995 6677432 2345688
Q ss_pred HHHHHHHHHHHhcCCCeEEEecccccccc---cccccCCCCCCceEEEecCCc-ceeeecchhhHHHHHHHHhcCcccCC
Q 038413 70 EKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGE-AKAVFNYEEDIAKCTIKVINDPRTCN 145 (191)
Q Consensus 70 ~~k~~~e~~l~~~~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~-~~~~~i~~~Dva~~~~~~l~~~~~~~ 145 (191)
++|...|..+++.=-+.||+||..+++.. +..+.....+-+.+++++.|. ..-++|++-|||.+++.++.+|.+.+
T Consensus 190 rsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~G 269 (391)
T KOG2865|consen 190 RSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMG 269 (391)
T ss_pred HhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccC
Confidence 99999999999876779999999888731 111111111346778888774 33578999999999999999999899
Q ss_pred ceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 146 RIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 146 ~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++|...| +...+..|+++.+=+...+-..+...|..-|
T Consensus 270 ktye~vG-P~~yql~eLvd~my~~~~~~~ry~r~~mP~f 307 (391)
T KOG2865|consen 270 KTYEFVG-PDRYQLSELVDIMYDMAREWPRYVRLPMPIF 307 (391)
T ss_pred ceeeecC-CchhhHHHHHHHHHHHHhhccccccCCcHHH
Confidence 9999986 7999999999999999887667776655444
No 46
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.65 E-value=6.4e-15 Score=116.46 Aligned_cols=179 Identities=12% Similarity=0.117 Sum_probs=123.1
Q ss_pred HHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC----CCC-----
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED----RVR----- 60 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~----~~~----- 60 (191)
.+.+..+..++|+|||+++..+ +.++.+++++|++.+ +++|+. |+ ++.... ...
T Consensus 79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~ 157 (367)
T TIGR01746 79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTP 157 (367)
T ss_pred HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccc
Confidence 3456677789999999988532 466889999999999 888774 43 322110 000
Q ss_pred CCCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCC-----CC--CCceEEEecCCc-ceeeecchhh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRP-----FE--PHDDVVVYGNGE-AKAVFNYEED 129 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~-----~~--~~~~~~~~~~g~-~~~~~i~~~D 129 (191)
...+...|..+|..+|..+++ .|++++++|||.+++......... .. .......++... ...++++++|
T Consensus 158 ~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vdd 237 (367)
T TIGR01746 158 PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDY 237 (367)
T ss_pred ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHH
Confidence 001234578899999988875 489999999999987421110000 00 000011222333 3578999999
Q ss_pred HHHHHHHHhcCcccC--CceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 130 IAKCTIKVINDPRTC--NRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 130 va~~~~~~l~~~~~~--~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
+|++++.++.++... ++.|++++ ++.+|+.|+++.+.+ +|.+++ .+|.++|...+.
T Consensus 238 va~ai~~~~~~~~~~~~~~~~~v~~-~~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~ 295 (367)
T TIGR01746 238 VARAIVALSSQPAASAGGPVFHVVN-PEPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLE 295 (367)
T ss_pred HHHHHHHHHhCCCcccCCceEEecC-CCCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHH
Confidence 999999999876532 78999996 799999999999999 998876 578888877664
No 47
>PLN02996 fatty acyl-CoA reductase
Probab=99.65 E-value=8.1e-15 Score=120.32 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=119.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCCC---CC--C--
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEED---RV--R-- 60 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~~---~~--~-- 60 (191)
|.+.+.++++++|+|||+|+..+ +.++.+++++|++. + +++|+. |+ ||.... +. +
T Consensus 102 ~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~k~~V~vST~~vyG~~~~~i~E~~~~~~ 180 (491)
T PLN02996 102 DSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVK-VKMLLHVSTAYVCGEKSGLILEKPFHMG 180 (491)
T ss_pred hHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeeeEEecCCCceeeeecCCCc
Confidence 55667788899999999998643 46789999999986 6 899874 32 443210 00 0
Q ss_pred ------------------------------------------------CCCCchhhHHHHHHHHHHHHh--cCCCeEEEe
Q 038413 61 ------------------------------------------------PLPPFEAYLEKKRIVRRAIEA--VEIPYTFVS 90 (191)
Q Consensus 61 ------------------------------------------------~~~~~~~~~~~k~~~e~~l~~--~~~~~tilr 90 (191)
...+...|..+|..+|+.+.+ .+++.+++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~R 260 (491)
T PLN02996 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIR 260 (491)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCCCEEEEC
Confidence 000123477899999999976 489999999
Q ss_pred cccccccccccccC------------CC-CCCceEEEecCCcceeeecchhhHHHHHHHHhcCc--c-cCCceeEeecCC
Q 038413 91 ANCYGAYFVNVLLR------------PF-EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP--R-TCNRIVIYRPQT 154 (191)
Q Consensus 91 p~~~~~~~~~~~~~------------~~-~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~--~-~~~~~~~i~~~~ 154 (191)
|+..++.+-..+.. .. ..+....++|+|++.+++|+++|++++++.++..+ . ..+++|++++ +
T Consensus 261 P~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s-~ 339 (491)
T PLN02996 261 PTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGS-S 339 (491)
T ss_pred CCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecC-C
Confidence 99888743211100 00 13334457888999999999999999999988753 1 2357899985 6
Q ss_pred --CccCHHHHHHHHHHHhCCc
Q 038413 155 --NIISQLELISLWEQKTGRS 173 (191)
Q Consensus 155 --~~~t~~e~~~~~~~~~g~~ 173 (191)
..+|+.|+++++.+..+..
T Consensus 340 ~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 340 LKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred CCCcccHHHHHHHHHHHhhhC
Confidence 7899999999999988753
No 48
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.65 E-value=7.8e-15 Score=112.76 Aligned_cols=175 Identities=17% Similarity=0.071 Sum_probs=114.5
Q ss_pred HHHHHhhccCcEEEEccCCCC-----------------cccHHHHHHHHHHcCCcc--EEEc-CC---cccCCC----CC
Q 038413 7 EKIVSILKEVDVVISTVAYPQ-----------------FLDQLKIVHAIKVAGNIK--RFLP-SE---FGCEED----RV 59 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~-----------------~~~~~~li~aa~~~g~vk--r~v~-s~---~g~~~~----~~ 59 (191)
..+..++.++|+|||+++... +.++.+++++|+++| ++ +|+. |+ ||.... +.
T Consensus 49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~ 127 (292)
T TIGR01777 49 LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEE 127 (292)
T ss_pred cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcc
Confidence 345567889999999997531 345789999999999 74 4554 32 443211 11
Q ss_pred CCCCCchhhHHHHHHHHHHH---HhcCCCeEEEecccccccccc---cccCCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 60 RPLPPFEAYLEKKRIVRRAI---EAVEIPYTFVSANCYGAYFVN---VLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 60 ~~~~~~~~~~~~k~~~e~~l---~~~~~~~tilrp~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
....+...+...+.+.|+.+ .+.+++++++||+.+++.... .+... ........+++++..+++||++|+|++
T Consensus 128 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~i~v~Dva~~ 206 (292)
T TIGR01777 128 DSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPP-FRLGLGGPLGSGRQWFSWIHIEDLVQL 206 (292)
T ss_pred cCCCCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHH-HhcCcccccCCCCcccccEeHHHHHHH
Confidence 10111111223333444443 346899999999999885311 11000 000001124677888999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVK 186 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 186 (191)
+..+++++.. ++.+++++ ++.+|+.|+++.+++.+|++..+ .+|...+..
T Consensus 207 i~~~l~~~~~-~g~~~~~~-~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~ 256 (292)
T TIGR01777 207 ILFALENASI-SGPVNATA-PEPVRNKEFAKALARALHRPAFF-PVPAFVLRA 256 (292)
T ss_pred HHHHhcCccc-CCceEecC-CCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHH
Confidence 9999988653 46899985 79999999999999999987643 477766543
No 49
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.64 E-value=5.8e-15 Score=116.58 Aligned_cols=170 Identities=15% Similarity=0.180 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+.++++|. |+ |+...
T Consensus 59 ~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~ 138 (349)
T TIGR02622 59 GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVW 138 (349)
T ss_pred ccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCC
Confidence 589999999999985 599999998531 3467899999988754678774 33 54321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh-----------cCCCeEEEecccccccccc---c----ccCCCCCCceEEEec
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA-----------VEIPYTFVSANCYGAYFVN---V----LLRPFEPHDDVVVYG 116 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~-----------~~~~~tilrp~~~~~~~~~---~----~~~~~~~~~~~~~~~ 116 (191)
.+.....|..+|..+|..+|.+++. .+++++++||+.+++++.. . +......++.+. .+
T Consensus 139 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~ 217 (349)
T TIGR02622 139 GYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IR 217 (349)
T ss_pred CCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-EC
Confidence 1111224567788899999988764 2899999999999985421 1 111111344444 45
Q ss_pred CCcceeeecchhhHHHHHHHHhcCc----ccCCceeEeecC-CCccCHHHHHHHHHHHhC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDP----RTCNRIVIYRPQ-TNIISQLELISLWEQKTG 171 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~----~~~~~~~~i~~~-~~~~t~~e~~~~~~~~~g 171 (191)
+|++.++|+|++|+|++++.++... ...++.|+++++ ++..|..|+++.+.+.++
T Consensus 218 ~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 218 NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 6788899999999999998877642 123579999842 268999999998888765
No 50
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.4e-15 Score=112.77 Aligned_cols=170 Identities=18% Similarity=0.297 Sum_probs=133.9
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~~~- 58 (191)
+|+.+...+...+. ..|.|+|.++... +..+..|+++++..|.+++|+. | .||.....
T Consensus 64 ~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~ 143 (331)
T KOG0747|consen 64 GDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA 143 (331)
T ss_pred ccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc
Confidence 46667777666664 6899999988642 4567899999999976999984 3 47754322
Q ss_pred ----CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc------cccccCCCCCCceEEEecCCcceeee
Q 038413 59 ----VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF------VNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 59 ----~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+.+.|..||.++|.++|..+++ .|++++++|.+..||+. +|.|.......+...+.|+|.+.+++
T Consensus 144 ~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~ 223 (331)
T KOG0747|consen 144 VVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSY 223 (331)
T ss_pred cccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceee
Confidence 23457889999999999999986 58999999999888853 23333223356778899999999999
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+|++|+++++-.++... ..|++|+|+. ....+..|+++.+.+...+
T Consensus 224 l~veD~~ea~~~v~~Kg-~~geIYNIgt-d~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 224 LYVEDVSEAFKAVLEKG-ELGEIYNIGT-DDEMRVIDLAKDICELFEK 269 (331)
T ss_pred EeHHHHHHHHHHHHhcC-CccceeeccC-cchhhHHHHHHHHHHHHHH
Confidence 99999999999999884 4689999995 8999999999999888865
No 51
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.64 E-value=8.6e-15 Score=110.33 Aligned_cols=172 Identities=15% Similarity=0.196 Sum_probs=132.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---c-c---cCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---F-G---CEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~-g---~~~ 56 (191)
.|++|++.+.+.++ ..|+|||+++.+. ..+..|+.++|.+.| .+-+-.|+ | | ..+
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCC
Confidence 48999999999997 4699999999875 356799999999999 65543443 2 2 223
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
.+.+...|..-|..+|...|..+++.+-.++|+|.++.++....+|. ....+++.+.+. .++..++++..|+|+
T Consensus 113 ~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~ 190 (281)
T COG1091 113 KETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLAD 190 (281)
T ss_pred CCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHH
Confidence 44445578888889999999999999999999999999986544443 222255566665 356678999999999
Q ss_pred HHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
++..++..... .+++++.+ ...+|+-|+++.+.+..|.+.+..
T Consensus 191 ~i~~ll~~~~~-~~~yH~~~-~g~~Swydfa~~I~~~~~~~~~v~ 233 (281)
T COG1091 191 AILELLEKEKE-GGVYHLVN-SGECSWYEFAKAIFEEAGVDGEVI 233 (281)
T ss_pred HHHHHHhcccc-CcEEEEeC-CCcccHHHHHHHHHHHhCCCcccc
Confidence 99998887543 34899985 677999999999999998665444
No 52
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.63 E-value=1.5e-15 Score=116.75 Aligned_cols=179 Identities=18% Similarity=0.180 Sum_probs=117.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cc-c---CC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FG-C---EE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g-~---~~ 56 (191)
.|+.|.+.+.+.++ ..|+|||+++..+ ..+..+|+++|++.| ++-+..|+ |+ . ..
T Consensus 35 ~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y 113 (286)
T PF04321_consen 35 LDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPY 113 (286)
T ss_dssp S-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB
T ss_pred cCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCccccc
Confidence 48899999999887 4799999998753 466789999999999 75544454 32 1 12
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
.+.....|...|..+|.++|+.+++..-+++|+|+++.++....++. .....++.+.++. +..+++++++|+|+
T Consensus 114 ~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~ 191 (286)
T PF04321_consen 114 TEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLAR 191 (286)
T ss_dssp -TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHH
Confidence 23333467788999999999999986669999999998886322222 1112566677664 55689999999999
Q ss_pred HHHHHhcCcc---cCCceeEeecCCCccCHHHHHHHHHHHhCCce-EEEEcCHHH
Q 038413 133 CTIKVINDPR---TCNRIVIYRPQTNIISQLELISLWEQKTGRSF-KRVHISEEE 183 (191)
Q Consensus 133 ~~~~~l~~~~---~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~-~~~~~~~~~ 183 (191)
++..+++... ...++|++++ ++.+|.-|+++.+.+.+|.+. .+..++.++
T Consensus 192 ~i~~l~~~~~~~~~~~Giyh~~~-~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~ 245 (286)
T PF04321_consen 192 VILELIEKNLSGASPWGIYHLSG-PERVSRYEFAEAIAKILGLDPELIKPVSSSE 245 (286)
T ss_dssp HHHHHHHHHHH-GGG-EEEE----BS-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred HHHHHHHhcccccccceeEEEec-CcccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence 9999998742 3468999996 799999999999999999766 555554443
No 53
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.63 E-value=1.2e-14 Score=113.69 Aligned_cols=163 Identities=13% Similarity=0.150 Sum_probs=115.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~---- 56 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|.+. + +++||. |+ ++...
T Consensus 63 ~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 63 ADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred CCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCC
Confidence 589999999999999999999998531 34568899999885 5 788774 43 22111
Q ss_pred -----CCCCCCCC------chhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----C--CCCCceEEE
Q 038413 57 -----DRVRPLPP------FEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----P--FEPHDDVVV 114 (191)
Q Consensus 57 -----~~~~~~~~------~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~--~~~~~~~~~ 114 (191)
++.....| ..+|..+|..+|+++.. .+++++++||+..++++...... . ...++..
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-- 219 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-- 219 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--
Confidence 11111112 24578899999988764 58999999999998865321100 0 0122221
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++ ...++|+|++|+|++++.+++++.. ++.|+++ ++.+|++|+++++.+.+|
T Consensus 220 ~~--~~~r~~i~v~Dva~a~~~~l~~~~~-~~~~ni~--~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 220 FN--TTHHRFVDVRDVALAHVKALETPSA-NGRYIID--GPVVTIKDIENVLREFFP 271 (325)
T ss_pred CC--CcCcCeeEHHHHHHHHHHHhcCccc-CceEEEe--cCCCCHHHHHHHHHHHCC
Confidence 11 2347899999999999999988653 4578886 468999999999999998
No 54
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.61 E-value=2.2e-14 Score=111.71 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=129.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---------------CcccHHHHHHHHHHcCCccEEEc-CCcc-----cC--CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---------------QFLDQLKIVHAIKVAGNIKRFLP-SEFG-----CE--ED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---------------~~~~~~~li~aa~~~g~vkr~v~-s~~g-----~~--~~ 57 (191)
||+.|...+.+|+.|+ .|+|+++.. +++++.|++++|++.| |+++|. |+.+ .. ..
T Consensus 62 ~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~ 139 (361)
T KOG1430|consen 62 GDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIING 139 (361)
T ss_pred cchhhhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccC
Confidence 6899999999999999 666666532 2678999999999999 999995 4322 11 11
Q ss_pred CCCCCCCch---hhHHHHHHHHHHHHhc----CCCeEEEecccccccccccccC----CCCCCceEEEecCCcceeeecc
Q 038413 58 RVRPLPPFE---AYLEKKRIVRRAIEAV----EIPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 58 ~~~~~~~~~---~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
+...+.|.. +|..+|..+|+++.+. ++.++.|||..+||.+-+.... ....++.....++++...++++
T Consensus 140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~ 219 (361)
T KOG1430|consen 140 DESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTY 219 (361)
T ss_pred CCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEE
Confidence 111223333 5678999999998763 3779999999999987555432 1225566777777778889999
Q ss_pred hhhHHHHHHHHh---c--CcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE-EEEcCH
Q 038413 127 EEDIAKCTIKVI---N--DPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK-RVHISE 181 (191)
Q Consensus 127 ~~Dva~~~~~~l---~--~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~-~~~~~~ 181 (191)
++++|.+.+.+. . .+...|+.++|++ +.....-+.+..+.+.+|...+ .+.+|.
T Consensus 220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d-~~p~~~~~~~~~l~~~lg~~~~~~~~~p~ 279 (361)
T KOG1430|consen 220 GENVAWAHILAARALLDKSPSVNGQFYFITD-DTPVRFFDFLSPLVKALGYCLPSSIKLPL 279 (361)
T ss_pred echhHHHHHHHHHHHHhcCCccCceEEEEeC-CCcchhhHHHHHHHHhcCCCCCceeecch
Confidence 998887765543 2 2446689999997 7888888888899999998877 444443
No 55
>PLN02583 cinnamoyl-CoA reductase
Probab=99.61 E-value=4.9e-14 Score=109.02 Aligned_cols=164 Identities=11% Similarity=0.052 Sum_probs=111.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHc-CCccEEEc-CCc---ccC-C--CC-
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVA-GNIKRFLP-SEF---GCE-E--DR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~-g~vkr~v~-s~~---g~~-~--~~- 58 (191)
+|++|.+++.+++.++|+|+|+++... +.++.+++++|.+. + ++|+|. |+. +.. . ..
T Consensus 64 ~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~ 142 (297)
T PLN02583 64 VDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQ 142 (297)
T ss_pred ecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCC
Confidence 589999999999999999999765321 45789999999886 6 899874 432 111 0 00
Q ss_pred --CCC--CCC-c------hhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 59 --VRP--LPP-F------EAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 59 --~~~--~~~-~------~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
... ..+ . ..|..+|..+|+++. ..+++++++||+..++........ .+. +.....+++ ..+
T Consensus 143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~-~~~-~~~~~~~~~--~~~ 218 (297)
T PLN02583 143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP-YLK-GAAQMYENG--VLV 218 (297)
T ss_pred CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh-hhc-CCcccCccc--Ccc
Confidence 000 011 1 146678999998874 358999999999998865322111 111 111222222 467
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccC-HHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS-QLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t-~~e~~~~~~~~~g~ 172 (191)
+||++|+|++++.+++++...+ .+.++ ++.++ ..++++++.+..+.
T Consensus 219 ~v~V~Dva~a~~~al~~~~~~~-r~~~~--~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 219 TVDVNFLVDAHIRAFEDVSSYG-RYLCF--NHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred eEEHHHHHHHHHHHhcCcccCC-cEEEe--cCCCccHHHHHHHHHHhCCC
Confidence 9999999999999999877655 46666 34444 67899999998863
No 56
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.60 E-value=8.5e-14 Score=105.14 Aligned_cols=158 Identities=19% Similarity=0.250 Sum_probs=107.4
Q ss_pred CCCCC-HHHHHHhh-ccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCC-CCCCCC-
Q 038413 1 GELDE-HEKIVSIL-KEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDR-VRPLPP- 64 (191)
Q Consensus 1 gD~~d-~~~l~~a~-~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~-~~~~~~- 64 (191)
+|+.| .+++.+++ .++|+||++++... ..+..++++++++.+ ++|+|. |+.+..... .....+
T Consensus 69 ~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~ 147 (251)
T PLN00141 69 ADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPA 147 (251)
T ss_pred eeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcc
Confidence 57887 57788888 69999999887531 125789999999999 999885 543321111 110011
Q ss_pred ------chhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 65 ------FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 65 ------~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
...++.+|..+|+++++++++|+++||+++++... .+.+.+.........+|+++|+|+++..++
T Consensus 148 ~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~---------~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~ 218 (251)
T PLN00141 148 YIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP---------TGNIVMEPEDTLYEGSISRDQVAEVAVEAL 218 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCC---------CceEEECCCCccccCcccHHHHHHHHHHHh
Confidence 11234578899999999999999999998876421 111222211112235799999999999999
Q ss_pred cCcccCCceeEeec--CCCccCHHHHHHHHHH
Q 038413 139 NDPRTCNRIVIYRP--QTNIISQLELISLWEQ 168 (191)
Q Consensus 139 ~~~~~~~~~~~i~~--~~~~~t~~e~~~~~~~ 168 (191)
.+++..++.+.+.+ +....|+++++..+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 219 LCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 98876677777764 2345899999888764
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=99.57 E-value=1.4e-13 Score=106.44 Aligned_cols=166 Identities=11% Similarity=0.149 Sum_probs=112.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC------------------cccHHHHHHHHHHcCCccEEEcCC---cccCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ------------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEE- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~------------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~- 56 (191)
+|+.|.+.+...++ ++|+|||+++... ..++.+++++|++.| +++++.|+ |+...
T Consensus 41 ~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~ 119 (298)
T PLN02778 41 GRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDA 119 (298)
T ss_pred CccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCC
Confidence 36677777887776 7899999998541 345789999999999 98877542 43211
Q ss_pred ---------CCCCCCC-CchhhHHHHHHHHHHHHhcCCCeEEEecccccccc--c-ccccCCCCCCceEEEecCCcceee
Q 038413 57 ---------DRVRPLP-PFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF--V-NVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 57 ---------~~~~~~~-~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~--~-~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+...+. |.++|..+|..+|.++.... +..++|++..++.. . ..+....+....+...+ .+
T Consensus 120 ~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~-----~s 193 (298)
T PLN02778 120 HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP-----NS 193 (298)
T ss_pred CCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC-----CC
Confidence 1111112 33578899999999998643 45677776533321 1 12211111222232222 36
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
++|++|+++++..++.... ++.|++++ ++.+|..|+++++.+++|.+.++
T Consensus 194 ~~yv~D~v~al~~~l~~~~--~g~yNigs-~~~iS~~el~~~i~~~~~~~~~~ 243 (298)
T PLN02778 194 MTILDELLPISIEMAKRNL--TGIYNFTN-PGVVSHNEILEMYRDYIDPSFTW 243 (298)
T ss_pred CEEHHHHHHHHHHHHhCCC--CCeEEeCC-CCcccHHHHHHHHHHHhCCCcee
Confidence 8999999999999987643 46999985 78999999999999999976543
No 58
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.56 E-value=3.5e-13 Score=102.68 Aligned_cols=180 Identities=21% Similarity=0.220 Sum_probs=132.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------cccHHHHHHHHHHcC-CccEEEc-CCcccCCCCCCCCCCchhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAG-NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g-~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k 72 (191)
+|+.+++++..+++|++.++++.+... .....++++++++++ .+++++. |.++.+.. ....+..+|
T Consensus 49 ~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------~~~~~~~~~ 122 (275)
T COG0702 49 GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------SPSALARAK 122 (275)
T ss_pred eccCCHhHHHHHhccccEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------CccHHHHHH
Confidence 589999999999999999999887432 223456666776643 2777775 55554321 234688999
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCC-CCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
...|+.+.++|++||++|+..++.+....+..... ....+...+.+ +.++++.+|++.++...+..|...++.+.++
T Consensus 123 ~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~ 200 (275)
T COG0702 123 AAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELA 200 (275)
T ss_pred HHHHHHHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccCcEEEcc
Confidence 99999999999999999976666543222111111 22222222233 7899999999999999999987788999999
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
+ ++..+..++++.+.+..|++..+...+.......+.
T Consensus 201 g-~~~~~~~~~~~~l~~~~gr~~~~~~~~~~~~~~~~~ 237 (275)
T COG0702 201 G-PEALTLAELASGLDYTIGRPVGLIPEALAALTLALS 237 (275)
T ss_pred C-CceecHHHHHHHHHHHhCCcceeeCCcHHHHHHHhc
Confidence 6 689999999999999999999997777666655443
No 59
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.55 E-value=1.4e-13 Score=113.03 Aligned_cols=160 Identities=18% Similarity=0.184 Sum_probs=107.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC--CCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR--PLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~--~~~~ 64 (191)
||+.|.+++.+++.++|+|||+++... ..++.+++++|+++| ++|||. |+.+....... ....
T Consensus 145 gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~s 223 (576)
T PLN03209 145 CDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNL 223 (576)
T ss_pred ecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhh
Confidence 689999999999999999999987542 246799999999999 999885 65554211110 0112
Q ss_pred chhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc-c
Q 038413 65 FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T 143 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~ 143 (191)
...+...|..++++|.++|++|++||||++.+...... ..+.+.....+......+..+|||++++.++.+++ .
T Consensus 224 k~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-----~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as 298 (576)
T PLN03209 224 FWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-----ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLS 298 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-----cccceeeccccccCCCccCHHHHHHHHHHHHcCchhc
Confidence 34566789999999999999999999998754211110 11222222221111235899999999999999775 6
Q ss_pred CCceeEeecCCCccCHHHHHHHHH
Q 038413 144 CNRIVIYRPQTNIISQLELISLWE 167 (191)
Q Consensus 144 ~~~~~~i~~~~~~~t~~e~~~~~~ 167 (191)
.++++.+.+ ++......+.+++.
T Consensus 299 ~~kvvevi~-~~~~p~~~~~~~~~ 321 (576)
T PLN03209 299 YCKVVEVIA-ETTAPLTPMEELLA 321 (576)
T ss_pred cceEEEEEe-CCCCCCCCHHHHHH
Confidence 789998874 33333344444443
No 60
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.54 E-value=1.1e-13 Score=103.01 Aligned_cols=166 Identities=20% Similarity=0.232 Sum_probs=121.0
Q ss_pred HHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cC---CcccCCCCCCC------C
Q 038413 8 KIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PS---EFGCEEDRVRP------L 62 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s---~~g~~~~~~~~------~ 62 (191)
-....+.++|-|||+|++.. ..++.+++..|++.| +||+ .| .||........ .
T Consensus 84 v~~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~v 161 (350)
T KOG1429|consen 84 VVEPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNV 161 (350)
T ss_pred chhHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCcccccccc
Confidence 34456789999999998752 467899999999998 5665 34 27754322110 1
Q ss_pred C---CchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------cCCCCCCceEEEecCCcceeeecch
Q 038413 63 P---PFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------LRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 63 ~---~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
. |..-|...|..+|..+.+ .|++.+|.|+-..+++.+.+. ....+.++++.++|+|.+.++|.++
T Consensus 162 npigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yv 241 (350)
T KOG1429|consen 162 NPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYV 241 (350)
T ss_pred CcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeH
Confidence 1 222355688888888765 489999999655555443221 1123478899999999999999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.|..+.++.+++++.. .-+++++ ++..|+.|+++++.+..|-...++.
T Consensus 242 sD~Vegll~Lm~s~~~--~pvNiGn-p~e~Tm~elAemv~~~~~~~s~i~~ 289 (350)
T KOG1429|consen 242 SDLVEGLLRLMESDYR--GPVNIGN-PGEFTMLELAEMVKELIGPVSEIEF 289 (350)
T ss_pred HHHHHHHHHHhcCCCc--CCcccCC-ccceeHHHHHHHHHHHcCCCcceee
Confidence 9999999999998743 4489996 7899999999999999975544443
No 61
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.52 E-value=9.6e-13 Score=104.13 Aligned_cols=169 Identities=16% Similarity=0.148 Sum_probs=112.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------------cccHHHHHHHHHHcCCccEEEc-CC---ccc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~ 54 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.+.+++||. |+ ||.
T Consensus 65 ~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~ 144 (353)
T PLN02896 65 ADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTA 144 (353)
T ss_pred CCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccc
Confidence 589999999999999999999998532 0346788999988743788874 33 542
Q ss_pred CC---------CCCC--C-------CCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----CC-
Q 038413 55 EE---------DRVR--P-------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----PF- 106 (191)
Q Consensus 55 ~~---------~~~~--~-------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~~- 106 (191)
.. ++.. . ..+..+|..+|..+|+++.. .+++.+++||+..++++...... ..
T Consensus 145 ~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~ 224 (353)
T PLN02896 145 KDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLS 224 (353)
T ss_pred cccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHH
Confidence 11 1110 0 01223688899999987754 58999999999888864321100 00
Q ss_pred -CCCce--EEEecCCc---ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 107 -EPHDD--VVVYGNGE---AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 107 -~~~~~--~~~~~~g~---~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
..+.. ....+... ..++|||++|+|++++.++..+.. +..++++ ++.+|+.|+++++.+.++.
T Consensus 225 ~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 225 PITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-EGRYICC--VDSYDMSELINHLSKEYPC 293 (353)
T ss_pred HhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-CccEEec--CCCCCHHHHHHHHHHhCCC
Confidence 01111 11111111 236999999999999999987543 3445443 6789999999999999973
No 62
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=9.6e-13 Score=99.80 Aligned_cols=177 Identities=16% Similarity=0.194 Sum_probs=125.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcC----CcccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPS----EFGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s----~~g~~~~~- 58 (191)
+|+.|.+.|++.|+ +.|.|+|.++... +-++.+++++|++++ ++.+|.| .||.+...
T Consensus 61 ~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip 139 (343)
T KOG1371|consen 61 GDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVP 139 (343)
T ss_pred eccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceee
Confidence 69999999999997 7899999998642 457899999999999 9998863 26654221
Q ss_pred ---CCCC-CCchhhHHHHHHHHHHHHhc----CCCeEEEecccccc----------------cccccccCCCC-------
Q 038413 59 ---VRPL-PPFEAYLEKKRIVRRAIEAV----EIPYTFVSANCYGA----------------YFVNVLLRPFE------- 107 (191)
Q Consensus 59 ---~~~~-~~~~~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~----------------~~~~~~~~~~~------- 107 (191)
.... .|.++|.++|..+|+.+... +...+.||.-...+ +.+|...+...
T Consensus 140 ~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~ 219 (343)
T KOG1371|consen 140 ITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQ 219 (343)
T ss_pred ccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccce
Confidence 1112 37788999999999998862 44556677322111 11111111100
Q ss_pred -CCceEEEecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 108 -PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 108 -~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
-+..+. ..+|+..++++++-|.|+..+.++..... ..++++++. +...+..||...++++.|+++++.-++
T Consensus 220 v~g~d~~-t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgt-g~g~~V~~lv~a~~k~~g~~~k~~~v~ 293 (343)
T KOG1371|consen 220 VVGRDYT-TIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGT-GKGSSVLELVTAFEKALGVKIKKKVVP 293 (343)
T ss_pred eecCccc-ccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecC-CCCccHHHHHHHHHHHhcCCCCccccC
Confidence 111122 22567889999999999999999998642 345888885 788999999999999999987776543
No 63
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.46 E-value=2.7e-12 Score=103.90 Aligned_cols=177 Identities=14% Similarity=0.232 Sum_probs=133.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPL 62 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~ 62 (191)
||+.|.+.+..++++ +|+|||+|+.-+ +-++.|+++||.++| |++||. |+ ++. .
T Consensus 309 gdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST-----DKA--V 380 (588)
T COG1086 309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST-----DKA--V 380 (588)
T ss_pred cccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec-----Ccc--c
Confidence 799999999999998 999999998642 568999999999999 999985 32 221 2
Q ss_pred CCchhhHHHHHHHHHHHHhc-------CCCeEEEecccccccc---cccccCCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 63 PPFEAYLEKKRIVRRAIEAV-------EIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 63 ~~~~~~~~~k~~~e~~l~~~-------~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
+|.+-+..+|..+|+.+.+. +-.++.+|.|...+.. .|-|.....+++++++. +.+..+-|.++.|.++
T Consensus 381 ~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~ 459 (588)
T COG1086 381 NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQ 459 (588)
T ss_pred CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHH
Confidence 56777889999999998752 2567889999877642 23232211266777776 5677788999999999
Q ss_pred HHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC----Cc--eEEEEc-CHHHHHHHh
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG----RS--FKRVHI-SEEELVKLS 188 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g----~~--~~~~~~-~~~~~~~~~ 188 (191)
.++.+....+ .|.+|-+-. |+++++.|+++.+.+..| .. ++++=+ |-|.+-+.|
T Consensus 460 LVlqA~a~~~-gGeifvldM-GepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGEKl~EeL 520 (588)
T COG1086 460 LVLQAGAIAK-GGEIFVLDM-GEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGEKLYEEL 520 (588)
T ss_pred HHHHHHhhcC-CCcEEEEcC-CCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCchhhhhhh
Confidence 9999888743 466666664 699999999999999997 33 344433 666665554
No 64
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.45 E-value=3.7e-13 Score=102.10 Aligned_cols=162 Identities=15% Similarity=0.254 Sum_probs=110.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLP 63 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~ 63 (191)
||+.|.+.+.++|+ +.|+|||+|+.-. +.++.|++++|.++| |++||.-| .++. .+
T Consensus 61 gDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IS----TDKA--v~ 133 (293)
T PF02719_consen 61 GDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIS----TDKA--VN 133 (293)
T ss_dssp TSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEE----ECGC--SS
T ss_pred ecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcc----cccc--CC
Confidence 69999999999998 9999999999753 567899999999999 99998532 1111 14
Q ss_pred CchhhHHHHHHHHHHHHhc-------CCCeEEEecccccccc---cccccCCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 64 PFEAYLEKKRIVRRAIEAV-------EIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 64 ~~~~~~~~k~~~e~~l~~~-------~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
|.+-+..+|..+|+++.+. +..++++|.|...+.- +|.|.....+++++.+. +.+..+-|.++++.++.
T Consensus 134 PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT-~p~mtRffmti~EAv~L 212 (293)
T PF02719_consen 134 PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVT-DPDMTRFFMTIEEAVQL 212 (293)
T ss_dssp --SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEEC-ETT-EEEEE-HHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeC-CCCcEEEEecHHHHHHH
Confidence 6677889999999999862 3468899988777632 23332211256778876 45667889999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++.+..... .++++..-. ++++++.|+++.+.+..|.
T Consensus 213 vl~a~~~~~-~geifvl~m-g~~v~I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 213 VLQAAALAK-GGEIFVLDM-GEPVKILDLAEAMIELSGL 249 (293)
T ss_dssp HHHHHHH---TTEEEEE----TCEECCCHHHHHHHHTT-
T ss_pred HHHHHhhCC-CCcEEEecC-CCCcCHHHHHHHHHhhccc
Confidence 999887643 356666654 6899999999999999974
No 65
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=2.9e-11 Score=87.50 Aligned_cols=175 Identities=19% Similarity=0.189 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc--CC--ccc----
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP--SE--FGC---- 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~--s~--~g~---- 54 (191)
.|+++.++..+.|+ .-..|||+++..+ +..+.|++..|.+.| |+++++ |+ |..
T Consensus 39 ~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 39 ADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred ccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCC
Confidence 48889888888886 5689999988653 355789999999999 998774 32 211
Q ss_pred CCCC----CCCCCCch-hhHHHHHHH----HHHHHhcCCCeEEEeccccccc---cccccc-----------CC-CCCCc
Q 038413 55 EEDR----VRPLPPFE-AYLEKKRIV----RRAIEAVEIPYTFVSANCYGAY---FVNVLL-----------RP-FEPHD 110 (191)
Q Consensus 55 ~~~~----~~~~~~~~-~~~~~k~~~----e~~l~~~~~~~tilrp~~~~~~---~~~~~~-----------~~-~~~~~ 110 (191)
+.++ ..++.|.. .|.-+|..+ ..|-.+.|-+||...|...+++ +-+... .. .....
T Consensus 118 PIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd 197 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTD 197 (315)
T ss_pred CCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCc
Confidence 1111 11122332 233345322 3444557999999998887763 211110 00 11345
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCC--ccCHHHHHHHHHHHhCCceEEEE
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTN--IISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~--~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.+.+||+|.-.++|+|.+|+|++++.+|.+-+.. +.++++. ++ .+|++|+++++.++.|.+.+.+.
T Consensus 198 ~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~v-Epiils~-ge~~EVtI~e~aeaV~ea~~F~G~l~~ 265 (315)
T KOG1431|consen 198 ELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGV-EPIILSV-GESDEVTIREAAEAVVEAVDFTGKLVW 265 (315)
T ss_pred eEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCc-cceEecc-CccceeEHHHHHHHHHHHhCCCceEEe
Confidence 7899999998899999999999999999986543 3455553 44 89999999999999998777664
No 66
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.32 E-value=1.5e-10 Score=86.32 Aligned_cols=176 Identities=15% Similarity=0.139 Sum_probs=112.4
Q ss_pred HHHHHHhhc-cCcEEEEccCCCC-----------------cccHHHHHHHHHH--cCCccEEEcCC----cccCCCCC--
Q 038413 6 HEKIVSILK-EVDVVISTVAYPQ-----------------FLDQLKIVHAIKV--AGNIKRFLPSE----FGCEEDRV-- 59 (191)
Q Consensus 6 ~~~l~~a~~-g~d~V~~~~~~~~-----------------~~~~~~li~aa~~--~g~vkr~v~s~----~g~~~~~~-- 59 (191)
.+.+.+... ++|+||+++|.+- +..+..|+++..+ .+ .+.+|..| ||...+..
T Consensus 46 ~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~t 124 (297)
T COG1090 46 WEGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVT 124 (297)
T ss_pred cchhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeee
Confidence 355666666 7999999999752 3557778887764 34 66777533 55433221
Q ss_pred CCCCCchhhHH-HHHHHHHHH---HhcCCCeEEEecccccccccccccC--CCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 60 RPLPPFEAYLE-KKRIVRRAI---EAVEIPYTFVSANCYGAYFVNVLLR--PFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 60 ~~~~~~~~~~~-~k~~~e~~l---~~~~~~~tilrp~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
....+...+.. -+..=|+.- ...|...+++|.|.+.+.....+.. +..+-+.---.|+|.+.++|||++|++++
T Consensus 125 E~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~ 204 (297)
T COG1090 125 EESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNA 204 (297)
T ss_pred cCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHH
Confidence 11112222222 112222222 2358899999999888742222111 11122222346789999999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
+..+++++. ....+|++. +.+++.+++..+++++++++... .+|.-.++
T Consensus 205 I~fll~~~~-lsGp~N~ta-P~PV~~~~F~~al~r~l~RP~~~-~vP~~~~r 253 (297)
T COG1090 205 ILFLLENEQ-LSGPFNLTA-PNPVRNKEFAHALGRALHRPAIL-PVPSFALR 253 (297)
T ss_pred HHHHHhCcC-CCCcccccC-CCcCcHHHHHHHHHHHhCCCccc-cCcHHHHH
Confidence 999999975 456788875 79999999999999999988544 44554443
No 67
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.32 E-value=4.6e-11 Score=102.01 Aligned_cols=174 Identities=10% Similarity=0.137 Sum_probs=113.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCC---C---------------cccHHHHHHHHHHcCCccEEEcCC---cccC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYP---Q---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCE-- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~---~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~-- 55 (191)
+|++|.+.+.+.+. +.|+|||+++.. . ..++.+|+++|++.| +++++.|+ |+..
T Consensus 412 ~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~ 490 (668)
T PLN02260 412 GRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAK 490 (668)
T ss_pred cccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcc
Confidence 47788888888886 789999999854 1 346799999999999 98877643 3311
Q ss_pred --------CCCCCCCCC-chhhHHHHHHHHHHHHhcCCCeEEEecccccccc---cccccCCCCC-CceEEEecCCccee
Q 038413 56 --------EDRVRPLPP-FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEP-HDDVVVYGNGEAKA 122 (191)
Q Consensus 56 --------~~~~~~~~~-~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~---~~~~~~~~~~-~~~~~~~~~g~~~~ 122 (191)
..+...+.| .++|..+|..+|.++... -++.++|+.+.++.. ..+|...-+. ...+.++ .
T Consensus 491 ~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp------~ 563 (668)
T PLN02260 491 HPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIP------N 563 (668)
T ss_pred cccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccC------C
Confidence 111111223 367889999999999865 355666665554321 1222211011 1122221 3
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
+..+++|++.++..++..+ .+++|++++ ++.+|+.|+++.+.+.++..+.+..++.+++.
T Consensus 564 ~~~~~~~~~~~~~~l~~~~--~~giyni~~-~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~ 623 (668)
T PLN02260 564 SMTVLDELLPISIEMAKRN--LRGIWNFTN-PGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA 623 (668)
T ss_pred CceehhhHHHHHHHHHHhC--CCceEEecC-CCcCcHHHHHHHHHHhcCCcccccccCHHHhh
Confidence 4567888888878877643 258999996 78899999999999988533334555555543
No 68
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.31 E-value=5.6e-11 Score=108.72 Aligned_cols=179 Identities=12% Similarity=0.042 Sum_probs=119.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccC-------------
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE------------- 55 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~------------- 55 (191)
+.+.+.++..++|+|||+++..+ +.++.+++++|++.+ +++|+. |+ ++..
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhcc
Confidence 34556667789999999998643 466899999999998 998774 33 3210
Q ss_pred ---CCCCC-----CCCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCC-----C-C-CCceEEEecC
Q 038413 56 ---EDRVR-----PLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRP-----F-E-PHDDVVVYGN 117 (191)
Q Consensus 56 ---~~~~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~-----~-~-~~~~~~~~~~ 117 (191)
..+.. ...+...|..+|+.+|..+.. .|++++++||+..++......... . . ........++
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence 00000 001234588899999999865 489999999999887532211100 0 0 0111222334
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
+...+++++++|+|++++.++.++. .....+++++ +..+++.++++.+.+ .|.+++. ++.+++...+
T Consensus 1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~-~g~~~~~--~~~~~w~~~l 1278 (1389)
T TIGR03443 1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG-HPRIRFNDFLGTLKT-YGYDVEI--VDYVHWRKSL 1278 (1389)
T ss_pred CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC-CCCCcHHHHHHHHHH-hCCCCCc--cCHHHHHHHH
Confidence 4556899999999999999988754 2345788885 678999999999976 4776544 5667776644
No 69
>PRK12320 hypothetical protein; Provisional
Probab=99.29 E-value=6.1e-11 Score=100.17 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=101.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEcCC-cccCCCCCCCCCCchhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLPSE-FGCEEDRVRPLPPFEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~s~-~g~~~~~~~~~~~~~~~~~~k 72 (191)
+|+.|.. +.+++.++|+|||+++... ..++.|++++|+++| ++.+..|+ +|. +. .+
T Consensus 47 ~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~G-vRiV~~SS~~G~---------~~-~~---- 110 (699)
T PRK12320 47 ASLRNPV-LQELAGEADAVIHLAPVDTSAPGGVGITGLAHVANAAARAG-ARLLFVSQAAGR---------PE-LY---- 110 (699)
T ss_pred ccCCCHH-HHHHhcCCCEEEEcCccCccchhhHHHHHHHHHHHHHHHcC-CeEEEEECCCCC---------Cc-cc----
Confidence 5788874 7788899999999998542 456889999999999 85333343 221 00 01
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeec
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
...|.++.+++++++++|+...++............ ..+... ....++.+||++|++++++.+++.+. +++|++++
T Consensus 111 ~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~-~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~ 186 (699)
T PRK12320 111 RQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVA-TLLRSK-VSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLAT 186 (699)
T ss_pred cHHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHH-HHHHHH-HcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeC
Confidence 146777777889999999998888532211000000 000000 11334667999999999999998643 35999996
Q ss_pred CCCccCHHHHHHHHHHH
Q 038413 153 QTNIISQLELISLWEQK 169 (191)
Q Consensus 153 ~~~~~t~~e~~~~~~~~ 169 (191)
++.+|+.|+++++...
T Consensus 187 -~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 187 -PDTTNVVTAWRLLRSV 202 (699)
T ss_pred -CCeeEHHHHHHHHHHh
Confidence 7999999999999776
No 70
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.28 E-value=1.8e-10 Score=80.84 Aligned_cols=146 Identities=17% Similarity=0.125 Sum_probs=95.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEc----CCcccCCCCC--CCCCCchh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLP----SEFGCEEDRV--RPLPPFEA 67 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~----s~~g~~~~~~--~~~~~~~~ 67 (191)
.|+.|++++.+.+.|+|+||++.+... ......|+++.+.+| +.|++. .|.-.+.... +.+.-..+
T Consensus 48 ~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~e 126 (211)
T COG2910 48 KDIFDLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAE 126 (211)
T ss_pred ccccChhhhHhhhcCCceEEEeccCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchh
Confidence 489999999999999999999988752 233567899999999 999662 2222222211 11111224
Q ss_pred hHH-HHHHHH--HHHHh-cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCccc
Q 038413 68 YLE-KKRIVR--RAIEA-VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRT 143 (191)
Q Consensus 68 ~~~-~k~~~e--~~l~~-~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~ 143 (191)
|+. .+.+.+ +.|+. ..++||++.|..++.++ .......+.+..+..-..| -+.|+..|.|-+++..+++|++
T Consensus 127 y~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PG-erTg~yrlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 127 YKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPG-ERTGNYRLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred HHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCc-cccCceEeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccc
Confidence 443 333333 44554 46999999999999874 3222222233333332233 4789999999999999999998
Q ss_pred CCceeEee
Q 038413 144 CNRIVIYR 151 (191)
Q Consensus 144 ~~~~~~i~ 151 (191)
.++.|.+.
T Consensus 203 ~rqRftv~ 210 (211)
T COG2910 203 IRQRFTVA 210 (211)
T ss_pred cceeeeec
Confidence 88887764
No 71
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.18 E-value=1.4e-09 Score=90.98 Aligned_cols=171 Identities=15% Similarity=0.173 Sum_probs=113.6
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC--
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-- 56 (191)
||+.++ +.+..+.+++|+|||+|+... +.++.+++++|++.+.+++|+. |+ ||...
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~ 278 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR 278 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence 577775 355555678999999998653 4678999999998743788774 32 33211
Q ss_pred -CC--CC--C--------------------------------C----------------------CC-chhhHHHHHHHH
Q 038413 57 -DR--VR--P--------------------------------L----------------------PP-FEAYLEKKRIVR 76 (191)
Q Consensus 57 -~~--~~--~--------------------------------~----------------------~~-~~~~~~~k~~~e 76 (191)
.+ .+ . . .+ ...|.-+|..+|
T Consensus 279 i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE 358 (605)
T PLN02503 279 IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGE 358 (605)
T ss_pred eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHH
Confidence 00 00 0 0 00 123456788899
Q ss_pred HHHHh--cCCCeEEEecccccc--------cccc--cccC--CCCCCceEE-EecCCcceeeecchhhHHHHHHHHhcC-
Q 038413 77 RAIEA--VEIPYTFVSANCYGA--------YFVN--VLLR--PFEPHDDVV-VYGNGEAKAVFNYEEDIAKCTIKVIND- 140 (191)
Q Consensus 77 ~~l~~--~~~~~tilrp~~~~~--------~~~~--~~~~--~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~- 140 (191)
+.+.+ .+++.+|+||+.+.. |... .... .....+.+. ++++++...+.|.+|.++++++.+...
T Consensus 359 ~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~ 438 (605)
T PLN02503 359 MVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKH 438 (605)
T ss_pred HHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhh
Confidence 98876 379999999987632 2111 0110 111334444 677888999999999999998888432
Q ss_pred c---ccCCceeEeecCC--CccCHHHHHHHHHHHhCC
Q 038413 141 P---RTCNRIVIYRPQT--NIISQLELISLWEQKTGR 172 (191)
Q Consensus 141 ~---~~~~~~~~i~~~~--~~~t~~e~~~~~~~~~g~ 172 (191)
+ ....++|++++ + +++++.++++.+.+....
T Consensus 439 ~~~~~~~~~vYn~ts-~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 439 GGAAKPEINVYQIAS-SVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hcccCCCCCEEEeCC-CCCCCeEHHHHHHHHHHHHhh
Confidence 2 12368999985 6 889999999999886653
No 72
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.03 E-value=4.3e-09 Score=83.36 Aligned_cols=132 Identities=16% Similarity=0.115 Sum_probs=85.7
Q ss_pred cCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCC---chhhHHHHHHHHHH
Q 038413 15 EVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPP---FEAYLEKKRIVRRA 78 (191)
Q Consensus 15 g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~---~~~~~~~k~~~e~~ 78 (191)
+..+++.+++..+ ..+++|+++||+.+| |+|++. ++++....... .+. ......+|..++++
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~-~~~~~~~~~~~~~k~~~e~~ 230 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQP-PNILLLNGLVLKAKLKAEKF 230 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCC-chhhhhhhhhhHHHHhHHHH
Confidence 4456666665432 356899999999999 999885 56654333221 111 22345789999999
Q ss_pred HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCC-ceeEee
Q 038413 79 IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCN-RIVIYR 151 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~ 151 (191)
++++|++|||||++.+..+......... .+..... .++.+--.|...|+|++++.++.++...+ ++.++.
T Consensus 231 ~~~Sgl~ytiIR~g~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v 301 (411)
T KOG1203|consen 231 LQDSGLPYTIIRPGGLEQDTGGQREVVV-DDEKELL--TVDGGAYSISRLDVAELVAKALLNEAATFKKVVELV 301 (411)
T ss_pred HHhcCCCcEEEeccccccCCCCcceecc-cCccccc--cccccceeeehhhHHHHHHHHHhhhhhccceeEEee
Confidence 9999999999999998875433221111 1111111 12221246889999999999999986444 666655
No 73
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.98 E-value=2e-09 Score=81.28 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=67.9
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC-cc--cCCCC
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE-FG--CEEDR 58 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~-~g--~~~~~ 58 (191)
||+.++ +.+....+.+|+|||+++..+ +.++.++++.|.+.+ .++|+. |+ +- .....
T Consensus 67 GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~ 145 (249)
T PF07993_consen 67 GDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGT 145 (249)
T ss_dssp --TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT
T ss_pred ccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCc
Confidence 567653 456666679999999998764 578899999999777 667663 32 11 11100
Q ss_pred C-------------CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-CC---------CCCce
Q 038413 59 V-------------RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-PF---------EPHDD 111 (191)
Q Consensus 59 ~-------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-~~---------~~~~~ 111 (191)
. ........|..+|+.+|+.+++ .|++++|+|||...+........ .. ...+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~ 225 (249)
T PF07993_consen 146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGA 225 (249)
T ss_dssp --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-E
T ss_pred ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCC
Confidence 0 0012234788999999999986 29999999999888732111110 00 01222
Q ss_pred EE-EecCCcceeeecchhhHHHHH
Q 038413 112 VV-VYGNGEAKAVFNYEEDIAKCT 134 (191)
Q Consensus 112 ~~-~~~~g~~~~~~i~~~Dva~~~ 134 (191)
++ .++..+...+++.+|.+|+++
T Consensus 226 ~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 226 FPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EES-SB---TT--EEEHHHHHHHH
T ss_pred cccccCCCCceEeEECHHHHHhhC
Confidence 22 444445568999999999874
No 74
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.95 E-value=1.7e-08 Score=77.18 Aligned_cols=164 Identities=18% Similarity=0.208 Sum_probs=102.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ .+++|.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ 133 (276)
T PRK06482 55 LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQV 133 (276)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58899888877664 4799999998532 23456677775 6667 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC---CCCCce-----EEE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP---FEPHDD-----VVV 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~-----~~~ 114 (191)
|+.+.... ..+...|..+|..++.+++. .|++++++|||.+...+.+..... ...... ...
T Consensus 134 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (276)
T PRK06482 134 SSEGGQIA----YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRA 209 (276)
T ss_pred cCcccccC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHH
Confidence 55432111 12345677899988876642 589999999998754332221100 000000 000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
...+. ...+.+.+|++++++.++..+.. +..+++++ ++..+..|+++.+.+.++.
T Consensus 210 ~~~~~-~~~~~d~~~~~~a~~~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 210 LADGS-FAIPGDPQKMVQAMIASADQTPA-PRRLTLGS-DAYASIRAALSERLAALEA 264 (276)
T ss_pred Hhhcc-CCCCCCHHHHHHHHHHHHcCCCC-CeEEecCh-HHHHHHHHHHHHHHHHHHH
Confidence 01111 11236899999999999987643 45588885 7888888888888777753
No 75
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.83 E-value=4e-08 Score=75.15 Aligned_cols=164 Identities=12% Similarity=0.149 Sum_probs=99.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+ ...++..+++.+ .+++|.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~v 134 (275)
T PRK08263 56 LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQI 134 (275)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 48888888877654 4699999998642 122 234444556777 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccccc-ccCC-CC-CCceE-EEecCC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNV-LLRP-FE-PHDDV-VVYGNG 118 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~-~~~~-~~-~~~~~-~~~~~g 118 (191)
|+.+..... .....|..+|...+.+.+ ..|+++++++||.+....... .... .. ....+ ......
T Consensus 135 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T PRK08263 135 SSIGGISAF----PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ 210 (275)
T ss_pred cChhhcCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH
Confidence 432221111 123457778887765543 258999999999877643321 1100 00 00000 001111
Q ss_pred cceeee-cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHh
Q 038413 119 EAKAVF-NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 119 ~~~~~~-i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
.....+ ++.+|+|++++.+++.+...++.+...+ .+.+++.++.+.+.+..
T Consensus 211 ~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 211 WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSG-VLDLAKADYERRLATWE 262 (275)
T ss_pred HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCch-HHHHHHHHHHHHHHHHH
Confidence 112345 8899999999999998765556555543 57899999999998854
No 76
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.82 E-value=9e-08 Score=71.62 Aligned_cols=145 Identities=10% Similarity=0.099 Sum_probs=89.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 63 ~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~ 141 (249)
T PRK12825 63 ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNI 141 (249)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58889998887775 4699999998432 12233444444 6777 888874
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ ..++.++++|||.++++............. .. .....
T Consensus 142 SS~~~~~~~----~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~--~~~~~ 212 (249)
T PRK12825 142 SSVAGLPGW----PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DA--ETPLG 212 (249)
T ss_pred CccccCCCC----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hc--cCCCC
Confidence 443222111 123456677766655443 358999999999999865433211110100 00 11112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+++.+|+++++..++.++. ..++.+++++ +..
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~-g~~ 247 (249)
T PRK12825 213 RSGTPEDIARAVAFLCSDASDYITGQVIEVTG-GVD 247 (249)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCCEEEeCC-CEe
Confidence 37899999999999997653 3489999985 443
No 77
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.82 E-value=6.2e-08 Score=73.29 Aligned_cols=147 Identities=12% Similarity=0.099 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------ccc----HHHHHHHH-HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLD----QLKIVHAI-KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~----~~~li~aa-~~~g~vkr~v~ 49 (191)
+|++|.+++.++++. .|+|||+++... +.+ +.++++++ ++.+ +++++.
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~ 141 (262)
T PRK13394 63 MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIY 141 (262)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEE
Confidence 588999988877653 799999998632 112 56678888 6777 888774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-CC------CceEEE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF-EP------HDDVVV 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~-~~------~~~~~~ 114 (191)
|+....... .+...|..+|...+.+++. .++..+++|||++.+.......... .. .....+
T Consensus 142 ~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (262)
T PRK13394 142 MGSVHSHEAS----PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKV 217 (262)
T ss_pred EcchhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHH
Confidence 443221111 1233566788777665542 4788999999988775432211000 00 000012
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
++.+.....+++++|+++++..++..+.. .++.+.+.+
T Consensus 218 ~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~ 257 (262)
T PRK13394 218 MLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH 257 (262)
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence 22344456899999999999999986532 267777764
No 78
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.79 E-value=8.7e-08 Score=73.22 Aligned_cols=162 Identities=10% Similarity=0.141 Sum_probs=98.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH----cCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV----AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~----~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++.+ .+ -.+++.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~ 143 (276)
T PRK05875 65 ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVG 143 (276)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 48889888887775 5799999997421 1223345554443 33 346663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEA 120 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 120 (191)
|+....... .+...|..+|..++.+++. .++.++.++||++.......... .... .-+.....
T Consensus 144 ~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~ 215 (276)
T PRK05875 144 ISSIAASNTH----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE----SPELSADYRACTP 215 (276)
T ss_pred EechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc----CHHHHHHHHcCCC
Confidence 432221111 2245678899888888763 47889999999876543222110 0000 00001111
Q ss_pred eeeecchhhHHHHHHHHhcCcccC--CceeEeecCCCcc----CHHHHHHHHHHHhCC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTC--NRIVIYRPQTNII----SQLELISLWEQKTGR 172 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~~~~~~----t~~e~~~~~~~~~g~ 172 (191)
...+++++|+|+++..++.++... ++.+++++ ++.+ +..|+++.+-+..|.
T Consensus 216 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 216 LPRVGEVEDVANLAMFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHHH
Confidence 123577999999999999886533 78899985 6776 777887777666554
No 79
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.76 E-value=2.7e-08 Score=69.65 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=69.7
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
|...-+.+..++.|.|+.|++.+... -+....+.++||+.| ||+|++ ||.|.+.++ ...|
T Consensus 70 Df~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS------rFlY 142 (238)
T KOG4039|consen 70 DFSKLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS------RFLY 142 (238)
T ss_pred chHHHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc------ceee
Confidence 33445667778889999999998653 356778899999999 999885 777776433 2357
Q ss_pred HHHHHHHHHHHHhcCCC-eEEEeccccccc
Q 038413 69 LEKKRIVRRAIEAVEIP-YTFVSANCYGAY 97 (191)
Q Consensus 69 ~~~k~~~e~~l~~~~~~-~tilrp~~~~~~ 97 (191)
..-|.++|+-+.+.+++ ++|+|||+....
T Consensus 143 ~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 143 MKMKGEVERDVIELDFKHIIILRPGPLLGE 172 (238)
T ss_pred eeccchhhhhhhhccccEEEEecCcceecc
Confidence 78899999999999886 889999987764
No 80
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.74 E-value=1.4e-07 Score=71.04 Aligned_cols=147 Identities=11% Similarity=0.171 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++ .+.|+|||+++... ..+. ..+++++++.+ ++++|.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ 135 (255)
T TIGR01963 57 ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINI 135 (255)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 5888988665544 45799999997532 1122 23444456777 888774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-------Ee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-------VY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-------~~ 115 (191)
|+....... .....|..+|..++.+++. .+++++.+||+.++++................ ..
T Consensus 136 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T TIGR01963 136 ASAHGLVAS----PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVM 211 (255)
T ss_pred cchhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHH
Confidence 332111111 1123466677766655532 48999999999988764322111000000000 01
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+....++++++|+|++++.++.++. ..++.+++.+
T Consensus 212 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~ 250 (255)
T TIGR01963 212 LPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG 250 (255)
T ss_pred HccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence 123344679999999999999998752 2367888874
No 81
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.74 E-value=1.9e-07 Score=70.38 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ..+++.++++.+ +++||.
T Consensus 60 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 138 (258)
T PRK12429 60 MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINM 138 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58899998888775 5799999997532 122 466777777788 888874
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCC-ce------EEEe
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPH-DD------VVVY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~------~~~~ 115 (191)
|+....... .+...|..+|...+.+.+ ..++.++.++||++.++............ +. ...+
T Consensus 139 ss~~~~~~~----~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (258)
T PRK12429 139 ASVHGLVGS----AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVL 214 (258)
T ss_pred cchhhccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHH
Confidence 432211111 123456667776664443 24788999999998875432211100000 00 0011
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.......+++++|+|+++..++..+. ..++.+.+.+
T Consensus 215 ~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 253 (258)
T PRK12429 215 LPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG 253 (258)
T ss_pred hccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence 122233579999999999999987643 2367787763
No 82
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.71 E-value=5.8e-07 Score=68.59 Aligned_cols=171 Identities=11% Similarity=0.111 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... + .....++..+++.+ ..+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~i 135 (273)
T PRK07825 57 LDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNV 135 (273)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 58899888776653 4699999998532 0 11244566667777 778763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|..++.+ +..+|+.+++++||++........ .+....
T Consensus 136 sS~~~~~~~----~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~--------------~~~~~~ 197 (273)
T PRK07825 136 ASLAGKIPV----PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT--------------GGAKGF 197 (273)
T ss_pred cCccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc--------------ccccCC
Confidence 443211111 1233566788766544 334689999999998765432110 011123
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeec---CCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRP---QTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~---~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.+++.+|+|+.++.++.++........... ....+....+.+.+.+..|....+...+.++....+.+
T Consensus 198 ~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (273)
T PRK07825 198 KNVEPEDVAAAIVGTVAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYERR 268 (273)
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceeechhhHHHHHHHhh
Confidence 578999999999999987642110000000 01345556888889999998887888888887776654
No 83
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.65 E-value=2.3e-07 Score=70.05 Aligned_cols=137 Identities=13% Similarity=0.088 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHhhc-cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-CCcccC
Q 038413 1 GELDEHEKIVSILK-EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP-SEFGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~-g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~-s~~g~~ 55 (191)
+|+.|.+++.+++. ++|+|||+++... . ....+++.++++.+ .+++|. |+.+..
T Consensus 58 ~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~ 136 (257)
T PRK09291 58 LDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGL 136 (257)
T ss_pred eeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhc
Confidence 58899999999887 8999999988532 0 12345667777788 788774 443211
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC---CCCCCc-eEEEecCCcceeee
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR---PFEPHD-DVVVYGNGEAKAVF 124 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~~ 124 (191)
... .....|..+|..++.+.+ ..|++++.+|||++..++...... ...... ...-...+..+.++
T Consensus 137 ~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (257)
T PRK09291 137 ITG----PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQ 212 (257)
T ss_pred cCC----CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccC
Confidence 111 123457778888876543 368999999999987654221110 000000 00001112233456
Q ss_pred cchhhHHHHHHHHhcCcc
Q 038413 125 NYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~ 142 (191)
++.+|+++.++.++.++.
T Consensus 213 ~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 213 FDPQEMIDAMVEVIPADT 230 (257)
T ss_pred CCHHHHHHHHHHHhcCCC
Confidence 788999998888887654
No 84
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1e-06 Score=65.60 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 139 (239)
T PRK12828 61 IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNI 139 (239)
T ss_pred eecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 48888888877765 5899999987531 12234555554 4566 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ +.++.+..++||++.+...... .+. ....
T Consensus 140 sS~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~-----------~~~--~~~~ 202 (239)
T PRK12828 140 GAGAALKAG----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD-----------MPD--ADFS 202 (239)
T ss_pred CchHhccCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc-----------CCc--hhhh
Confidence 443221111 123356667776655553 2589999999998877521110 010 1112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
.+++.+|+|+++..++.++. ..++.+.+.+ ++.+
T Consensus 203 ~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g-~~~~ 238 (239)
T PRK12828 203 RWVTPEQIAAVIAFLLSDEAQAITGASIPVDG-GVAL 238 (239)
T ss_pred cCCCHHHHHHHHHHHhCcccccccceEEEecC-CEeC
Confidence 37899999999999998753 2378888874 4443
No 85
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.63 E-value=2e-06 Score=64.83 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=113.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCc--cEEE-cCC---cccCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI--KRFL-PSE---FGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v--kr~v-~s~---~g~~~~ 57 (191)
||++|...|.++++ ..|-|||+++... ..++.+|++|.+.-| - -||. .|+ ||.-..
T Consensus 62 gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~ 140 (345)
T COG1089 62 GDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQE 140 (345)
T ss_pred ccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCccc
Confidence 79999999999997 5699999998753 246799999999877 4 2454 232 664222
Q ss_pred ----CCCCCCCchhhHHHHHHHH----HHHHhcCCCeEEEeccccccc---c-ccccc---------CCCCCCceEEEec
Q 038413 58 ----RVRPLPPFEAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAY---F-VNVLL---------RPFEPHDDVVVYG 116 (191)
Q Consensus 58 ----~~~~~~~~~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~---~-~~~~~---------~~~~~~~~~~~~~ 116 (191)
+..+..|.+||..+|.-+- .|=++.|+-.+. |..+.. + ...|. .+......-...|
T Consensus 141 ~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~Acn---GILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lG 217 (345)
T COG1089 141 IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACN---GILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLG 217 (345)
T ss_pred CccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeec---ceeecCCCCCCccceehHHHHHHHHHHHccccceEEec
Confidence 2233568889988876443 333334543221 111110 0 00110 1111222334567
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
+-+.++||-+..|.++++-.+|+.++ ...|.++. ++.-|.+|++++.-+..|.++..+
T Consensus 218 NldAkRDWG~A~DYVe~mwlmLQq~~--PddyViAT-g~t~sVrefv~~Af~~~g~~l~w~ 275 (345)
T COG1089 218 NLDAKRDWGHAKDYVEAMWLMLQQEE--PDDYVIAT-GETHSVREFVELAFEMVGIDLEWE 275 (345)
T ss_pred cccccccccchHHHHHHHHHHHccCC--CCceEEec-CceeeHHHHHHHHHHHcCceEEEe
Confidence 88999999999999999888888765 46777885 899999999999999999877643
No 86
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.62 E-value=4.8e-07 Score=67.97 Aligned_cols=144 Identities=13% Similarity=0.092 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|++++.++++ +.|+|||+++... ..+..+++++ +++.+ .++||.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~ 139 (250)
T PRK08063 61 ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISL 139 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58899998888776 4799999987532 1123334444 44455 668774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|..++.+++. .|+.++.++||++.......+.. ...............
T Consensus 140 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 212 (250)
T PRK08063 140 SSLGSIRYL----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN---REELLEDARAKTPAG 212 (250)
T ss_pred cchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC---chHHHHHHhcCCCCC
Confidence 543322111 1234577889988888653 57899999999887654322110 000000000000112
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+++.+|+|+++..++.++.. .++.+.+.+
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 244 (250)
T PRK08063 213 RMVEPEDVANAVLFLCSPEADMIRGQTIIVDG 244 (250)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 468899999999999987542 377788874
No 87
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.58 E-value=7.1e-07 Score=67.11 Aligned_cols=146 Identities=10% Similarity=0.142 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ...++.++++.+ .++++.
T Consensus 60 ~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 138 (252)
T PRK06138 60 GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNT 138 (252)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58999999888765 5899999998532 111 244566667777 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+++. .++.++.++||++.+...............+........+.
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (252)
T PRK06138 139 ASQLALAGG----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM 214 (252)
T ss_pred CChhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCC
Confidence 443221111 1234577788877766543 38999999999887654322211000000000000111122
Q ss_pred -eecchhhHHHHHHHHhcCccc--CCceeEee
Q 038413 123 -VFNYEEDIAKCTIKVINDPRT--CNRIVIYR 151 (191)
Q Consensus 123 -~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~ 151 (191)
.+++.+|+|+++..++.++.. -+..+.+.
T Consensus 215 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 246 (252)
T PRK06138 215 NRFGTAEEVAQAALFLASDESSFATGTTLVVD 246 (252)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence 378899999999999988642 25556665
No 88
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.55 E-value=7.7e-07 Score=67.22 Aligned_cols=159 Identities=11% Similarity=0.054 Sum_probs=96.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHH----HHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIV----HAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li----~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..+++ ..+++.+ ..+++.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 134 (257)
T PRK07074 56 CDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNI 134 (257)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58889998887775 4799999997532 11223333 4445566 567664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE-ecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 121 (191)
|+..... .. ....|..+|...+.+++. .|+.++.++||++.+........ ....+.- ...+...
T Consensus 135 sS~~~~~-~~----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 206 (257)
T PRK07074 135 GSVNGMA-AL----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA---ANPQVFEELKKWYPL 206 (257)
T ss_pred cchhhcC-CC----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc---cChHHHHHHHhcCCC
Confidence 3321111 11 112466788877766553 37888999999876643211000 0000000 0012223
Q ss_pred eeecchhhHHHHHHHHhcCc-c-cCCceeEeecCCCccCHHHHHHHHHHH
Q 038413 122 AVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
.++++++|+++++..++.++ . ..++.+.+.+ +...+..||++.+.+.
T Consensus 207 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 207 QDFATPDDVANAVLFLASPAARAITGVCLPVDG-GLTAGNREMARTLTLE 255 (257)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCC-CcCcCChhhhhhhccc
Confidence 57899999999999999764 2 2367788885 7889999999887653
No 89
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.53 E-value=1.7e-06 Score=64.95 Aligned_cols=146 Identities=13% Similarity=0.137 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cc----cHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FL----DQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~----~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+|||+++... .. ...++++++++.+ .++||.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 138 (251)
T PRK07231 60 ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVN 138 (251)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58899999988775 4699999998521 11 1345556666677 778774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..... .+...|..+|...+.+.+. .++.++.++||++................. .........
T Consensus 139 ~sS~~~~~~~----~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~ 213 (251)
T PRK07231 139 VASTAGLRPR----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENR-AKFLATIPL 213 (251)
T ss_pred EcChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHH-HHHhcCCCC
Confidence 443322111 1234566778776655542 378999999998866432221110000000 000011112
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+++++|+|++++.++.++. . .++.+.+.|
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 246 (251)
T PRK07231 214 GRLGTPEDIANAALFLASDEASWITGVTLVVDG 246 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence 356899999999999997653 2 256667763
No 90
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.2e-06 Score=65.73 Aligned_cols=152 Identities=15% Similarity=0.184 Sum_probs=91.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------cccHHHHHHHHHHcC-CccEEE-cCCcccCC-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------FLDQLKIVHAIKVAG-NIKRFL-PSEFGCEE-D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g-~vkr~v-~s~~g~~~-~ 57 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.+.- .-.++| .|+.+... .
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~ 142 (248)
T PRK07806 63 ADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP 142 (248)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc
Confidence 58999998887765 5899999987531 345678888887642 023555 34432211 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.........+|..+|..+|.+++. .++.+++++|+...++....+.... ..+.+ .........+++++|+
T Consensus 143 ~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~dv 219 (248)
T PRK07806 143 TVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL-NPGAI--EARREAAGKLYTVSEF 219 (248)
T ss_pred cccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC-CHHHH--HHHHhhhcccCCHHHH
Confidence 101111134677899999988764 4788888988876554322211100 00000 0000011368999999
Q ss_pred HHHHHHHhcCcccCCceeEeecCCCc
Q 038413 131 AKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
|++++.+++++...++.++++| ++.
T Consensus 220 a~~~~~l~~~~~~~g~~~~i~~-~~~ 244 (248)
T PRK07806 220 AAEVARAVTAPVPSGHIEYVGG-ADY 244 (248)
T ss_pred HHHHHHHhhccccCccEEEecC-ccc
Confidence 9999999997655688899985 443
No 91
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.52 E-value=1.6e-06 Score=65.11 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=86.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ .+|+|||+++... ..+..++++++ ++.+ .++++.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 140 (251)
T PRK12826 62 VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLT 140 (251)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888875 5799999987542 12234455554 5566 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+.. ... ..+...|..+|..++.+++. .++++++++|+.+.++........ .............
T Consensus 141 ss~~~~-~~~--~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~ 213 (251)
T PRK12826 141 SSVAGP-RVG--YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA----QWAEAIAAAIPLG 213 (251)
T ss_pred echHhh-ccC--CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch----HHHHHHHhcCCCC
Confidence 432221 000 12234566788777666543 489999999999887543221110 0000000011012
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+++++|+|.++..++.++.. .++.+.+.+
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 245 (251)
T PRK12826 214 RLGEPEDIAAAVLFLASDEARYITGQTLPVDG 245 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 578999999999998876532 378888874
No 92
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.51 E-value=1.3e-06 Score=64.16 Aligned_cols=172 Identities=11% Similarity=0.063 Sum_probs=116.6
Q ss_pred CCCCHHHHHHhhc--cCcEEEEccCC------C--------CcccHHHHHHHHHHcCCccEEEcCCcc---cCCCCCCC-
Q 038413 2 ELDEHEKIVSILK--EVDVVISTVAY------P--------QFLDQLKIVHAIKVAGNIKRFLPSEFG---CEEDRVRP- 61 (191)
Q Consensus 2 D~~d~~~l~~a~~--g~d~V~~~~~~------~--------~~~~~~~li~aa~~~g~vkr~v~s~~g---~~~~~~~~- 61 (191)
|+.|...|.+..- ..|-+||..+. . ++++..|+++.|++++ .|-||+|..| .+...-+.
T Consensus 95 DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPRNPTP 173 (366)
T KOG2774|consen 95 DILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPRNPTP 173 (366)
T ss_pred hhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCCCCCC
Confidence 6777778877763 56888876432 1 2678899999999999 9999998644 32221110
Q ss_pred ----CCCchhhHHHHHHHHHH---HH-hcCCCeEEEecccccccccccccC---------CCCCCceEEEecCCcceeee
Q 038413 62 ----LPPFEAYLEKKRIVRRA---IE-AVEIPYTFVSANCYGAYFVNVLLR---------PFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 62 ----~~~~~~~~~~k~~~e~~---l~-~~~~~~tilrp~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~ 124 (191)
..|..-|..+|.-+|-. .. .-|+++..+|....+.+-.|.-+. ..+.+++...+-..+.+.++
T Consensus 174 dltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpm 253 (366)
T KOG2774|consen 174 DLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPM 253 (366)
T ss_pred CeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCce
Confidence 12444466677665532 22 248888888855555432222110 12255666666667788999
Q ss_pred cchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhC-CceEE
Q 038413 125 NYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTG-RSFKR 176 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g-~~~~~ 176 (191)
.|..|.-+.++..|..+. -..++|++. +-..|..|+++.+.+... .++.+
T Consensus 254 my~~dc~~~~~~~~~a~~~~lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y 306 (366)
T KOG2774|consen 254 MYDTDCMASVIQLLAADSQSLKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDY 306 (366)
T ss_pred eehHHHHHHHHHHHhCCHHHhhhheeeec--eeccCHHHHHHHHHhhCCCceeec
Confidence 999999999999988663 347889998 699999999999999884 44444
No 93
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.51 E-value=8e-07 Score=64.92 Aligned_cols=127 Identities=18% Similarity=0.035 Sum_probs=85.2
Q ss_pred HHHHhhccCcEEEEccCCCC---------cccHHHHHHHHHHcCCccEEEc-CC--cccCCCCCCCCCCchhhHHHHHHH
Q 038413 8 KIVSILKEVDVVISTVAYPQ---------FLDQLKIVHAIKVAGNIKRFLP-SE--FGCEEDRVRPLPPFEAYLEKKRIV 75 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~---------~~~~~~li~aa~~~g~vkr~v~-s~--~g~~~~~~~~~~~~~~~~~~k~~~ 75 (191)
-+..++.|...++.+++... .+...+-++||+++| |++|++ |. +|... .-.+.|+..|.++
T Consensus 110 ~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~------~i~rGY~~gKR~A 182 (283)
T KOG4288|consen 110 PNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPP------LIPRGYIEGKREA 182 (283)
T ss_pred cchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCC------ccchhhhccchHH
Confidence 34556678888888887643 244567788999999 999986 32 22211 1133688999999
Q ss_pred HHHHHh-cCCCeEEEecccccccccccccCCC-------------C---CCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 76 RRAIEA-VEIPYTFVSANCYGAYFVNVLLRPF-------------E---PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 76 e~~l~~-~~~~~tilrp~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
|..|.. .+..-.++|||++++.. .+..+. + ....-.++--|....+++.+++||.+++.++
T Consensus 183 E~Ell~~~~~rgiilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai 260 (283)
T KOG4288|consen 183 EAELLKKFRFRGIILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAI 260 (283)
T ss_pred HHHHHHhcCCCceeeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhc
Confidence 988875 57778999999999852 111100 0 1111112223455578999999999999999
Q ss_pred cCccc
Q 038413 139 NDPRT 143 (191)
Q Consensus 139 ~~~~~ 143 (191)
.+|.-
T Consensus 261 ~dp~f 265 (283)
T KOG4288|consen 261 EDPDF 265 (283)
T ss_pred cCCCc
Confidence 99864
No 94
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.49 E-value=1e-06 Score=65.74 Aligned_cols=144 Identities=11% Similarity=0.122 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|++++.+++++ +|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ 139 (246)
T PRK05653 61 FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNI 139 (246)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 488999988887764 499999997632 12234555555 5667 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+...+ ..++.++++|||.+.+........ ....... ......
T Consensus 140 ss~~~~~~~----~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~----~~~~~~ 210 (246)
T PRK05653 140 SSVSGVTGN----PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE-EVKAEIL----KEIPLG 210 (246)
T ss_pred CcHHhccCC----CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH-HHHHHHH----hcCCCC
Confidence 443221111 223456667765554433 358899999999887754321110 0000000 011114
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCC
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN 155 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~ 155 (191)
.+++.+|+|+++..++.... ..++.+.++| ++
T Consensus 211 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g-g~ 244 (246)
T PRK05653 211 RLGQPEEVANAVAFLASDAASYITGQVIPVNG-GM 244 (246)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEeCC-Ce
Confidence 56888999999999987532 3478888874 44
No 95
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.47 E-value=4.3e-06 Score=61.77 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCCc-------------------c----cHHHHHHHHHHcCCccEEEcCC-cc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQF-------------------L----DQLKIVHAIKVAGNIKRFLPSE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~~-------------------~----~~~~li~aa~~~g~vkr~v~s~-~g 53 (191)
+|+.|.+++.++++ +.|+|||+++.... . ...++++++++.+ .+.++.|+ .+
T Consensus 54 ~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~ 132 (227)
T PRK08219 54 VDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAG 132 (227)
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHh
Confidence 68999999999886 58999999986320 1 1455666666665 33333343 32
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-----cC-CCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VE-IPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~-~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
.... .+...|..+|..++.+++. .+ +.++.++||.+.......... . . +....+..++++
T Consensus 133 ~~~~-----~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~-~-----~~~~~~~~~~~~ 198 (227)
T PRK08219 133 LRAN-----PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA---Q-E-----GGEYDPERYLRP 198 (227)
T ss_pred cCcC-----CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh---h-h-----ccccCCCCCCCH
Confidence 2111 1234567788877766543 24 889999998765432211110 0 0 001112457999
Q ss_pred hhHHHHHHHHhcCcccCCceeEe
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i 150 (191)
+|+|++++.++++++ .+.++++
T Consensus 199 ~dva~~~~~~l~~~~-~~~~~~~ 220 (227)
T PRK08219 199 ETVAKAVRFAVDAPP-DAHITEV 220 (227)
T ss_pred HHHHHHHHHHHcCCC-CCccceE
Confidence 999999999998864 2344444
No 96
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.44 E-value=4.6e-06 Score=63.81 Aligned_cols=152 Identities=11% Similarity=0.180 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.+ + .+.|+|+|+++... ..+..+++++ +++.+ ..++|.
T Consensus 61 ~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~v 138 (280)
T PRK06914 61 LDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINI 138 (280)
T ss_pred cCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58888887765 3 24699999987532 1223334444 57777 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CC--CC-CceEEE----
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PF--EP-HDDVVV---- 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~--~~-~~~~~~---- 114 (191)
|+.+..... .+...|..+|..++.+++. .|++++++|||++..+....... .. .. ......
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (280)
T PRK06914 139 SSISGRVGF----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKK 214 (280)
T ss_pred CcccccCCC----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHH
Confidence 432211111 2244577788887776553 48999999999988764321110 00 00 000000
Q ss_pred -ecC-CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHH
Q 038413 115 -YGN-GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQL 160 (191)
Q Consensus 115 -~~~-g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~ 160 (191)
... ......+++.+|+|++++.++.++... ..|++++ +..+++.
T Consensus 215 ~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 260 (280)
T PRK06914 215 IQKHINSGSDTFGNPIDVANLIVEIAESKRPK-LRYPIGK-GVKLMIL 260 (280)
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHHHcCCCCC-cccccCC-chHHHHH
Confidence 000 011235689999999999999987543 5567753 4555444
No 97
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.44 E-value=4.5e-06 Score=62.89 Aligned_cols=144 Identities=12% Similarity=0.079 Sum_probs=83.9
Q ss_pred CCCCCHHHHHHhhc-------------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccE
Q 038413 1 GELDEHEKIVSILK-------------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr 46 (191)
+|+.|.+++.++++ ++|++||+++... +.+..++++++.+. . ..+
T Consensus 63 ~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~ 141 (254)
T PRK12746 63 ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGR 141 (254)
T ss_pred cCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCE
Confidence 58999999888776 4899999998632 12345555666542 2 235
Q ss_pred EEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++. |+...... ..+...|..+|..++.+.+ ..++.++.++||++.......... ...........
T Consensus 142 ~v~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~ 214 (254)
T PRK12746 142 VINISSAEVRLG----FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD---DPEIRNFATNS 214 (254)
T ss_pred EEEECCHHhcCC----CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc---ChhHHHHHHhc
Confidence 553 44222111 1223457778888776643 257999999999876643221110 00000001111
Q ss_pred cceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.....+++++|+|+++..++.++.. .++.+++.+
T Consensus 215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~ 250 (254)
T PRK12746 215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG 250 (254)
T ss_pred CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence 1123467899999999888876532 367888873
No 98
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.39 E-value=3.3e-06 Score=63.88 Aligned_cols=147 Identities=11% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-C-------------------cccHHHHHHHH----HHcCCc-cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-Q-------------------FLDQLKIVHAI----KVAGNI-KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-~-------------------~~~~~~li~aa----~~~g~v-kr~v 48 (191)
+|+.|++++.++++ ++|+|||+++.. . ..+..++++++ +..+ . ++++
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv 143 (264)
T PRK12829 65 ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVII 143 (264)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 58899998887764 689999999865 1 12334444444 5555 5 4555
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC--C-CCCceEEEec-
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP--F-EPHDDVVVYG- 116 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~--~-~~~~~~~~~~- 116 (191)
. |+....... .+...|..+|...+.+++. .++.++++|||++++......... . ..........
T Consensus 144 ~~ss~~~~~~~----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (264)
T PRK12829 144 ALSSVAGRLGY----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQE 219 (264)
T ss_pred EecccccccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHH
Confidence 4 332211111 1233467788877777653 489999999999876543221110 0 0000000000
Q ss_pred --CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeec
Q 038413 117 --NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRP 152 (191)
Q Consensus 117 --~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~ 152 (191)
.......+++++|+|+++..++... ...++.+.+.+
T Consensus 220 ~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 220 YLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG 259 (264)
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence 0001124799999999998888653 22367788875
No 99
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=98.37 E-value=2.9e-06 Score=61.99 Aligned_cols=101 Identities=8% Similarity=-0.030 Sum_probs=68.6
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCC--CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeE
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP--FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVI 149 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~ 149 (191)
+++............+++|.|...+-+......+ .++-+.---.|+|.+-++|||++|++..+.+++++|.. ..+++
T Consensus 160 ~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v-~GViN 238 (315)
T KOG3019|consen 160 EWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSV-KGVIN 238 (315)
T ss_pred HHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCC-Cceec
Confidence 4444333333457789999998776432221111 01111111246888999999999999999999999864 34454
Q ss_pred eecCCCccCHHHHHHHHHHHhCCce
Q 038413 150 YRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
-.. ++..+..|+.+.+.++++++.
T Consensus 239 gvA-P~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 239 GVA-PNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred ccC-CCccchHHHHHHHHHHhCCCc
Confidence 332 689999999999999999984
No 100
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.34 E-value=3.7e-06 Score=63.56 Aligned_cols=153 Identities=9% Similarity=0.080 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC----CccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG----NIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g----~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++++++.... .-.++| .
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~ 138 (257)
T PRK07067 59 LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINM 138 (257)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 58889888887775 4799999987531 234566777765431 012454 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC----C-CC-CCceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR----P-FE-PHDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~----~-~~-~~~~~~~~~ 116 (191)
|+....... .+...|..+|...+.+.+. .|+..+.++||+..+........ . .. ........+
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
T PRK07067 139 ASQAGRRGE----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVG 214 (257)
T ss_pred CCHHhCCCC----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHh
Confidence 442211111 2344577788887766542 57899999999887653221100 0 00 000111122
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
.+.....+++.+|+|+++..++.++. ..++.+++.| ++.+|
T Consensus 215 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g-g~~~~ 257 (257)
T PRK07067 215 EAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG-GNWMS 257 (257)
T ss_pred hcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC-CEeCC
Confidence 23333568899999999999998753 2378888885 55543
No 101
>PRK06182 short chain dehydrogenase; Validated
Probab=98.32 E-value=1.5e-05 Score=60.87 Aligned_cols=136 Identities=10% Similarity=0.116 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCCc-----------------------ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQF-----------------------LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~~-----------------------~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++.... .....++..+++.+ ..++|.
T Consensus 53 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~i 131 (273)
T PRK06182 53 LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINI 131 (273)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999888775 68999999985420 11466677788887 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCC-ceEEE-------
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVV------- 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~------- 114 (191)
|+.+..... .....|..+|..++.+.+ ..|+++++++||++..++........... .....
T Consensus 132 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
T PRK06182 132 SSMGGKIYT----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAV 207 (273)
T ss_pred cchhhcCCC----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHH
Confidence 443221111 112346678888876543 35899999999998775432111000000 00000
Q ss_pred ---ecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 115 ---YGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 115 ---~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.........+.+.+|+|++++.++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~ 237 (273)
T PRK06182 208 AASMRSTYGSGRLSDPSVIADAISKAVTAR 237 (273)
T ss_pred HHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence 000111234568999999999998864
No 102
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.31 E-value=3.8e-05 Score=58.82 Aligned_cols=159 Identities=18% Similarity=0.090 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++ .+.+.-.++|.
T Consensus 62 ~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~i 141 (275)
T PRK05876 62 CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFT 141 (275)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 48899998887765 3699999998531 12334455554 34431245553
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCC----CCCceEEEecC
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPF----EPHDDVVVYGN 117 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~----~~~~~~~~~~~ 117 (191)
|| .+... ..+...|..+|..++.+.+ ..|+..++++||.+............ ........++.
T Consensus 142 sS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (275)
T PRK05876 142 ASFAGLVP-----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGP 216 (275)
T ss_pred CChhhccC-----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccccccc
Confidence 43 22211 1223457778876443332 25899999999987765432211110 01111122333
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
.....++++++|+|+.++.++..+ +.+.+. ...+..++.+.+.+...
T Consensus 217 ~~~~~~~~~~~dva~~~~~ai~~~----~~~~~~---~~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 217 LPLQDDNLGVDDIAQLTADAILAN----RLYVLP---HAASRASIRRRFERIDR 263 (275)
T ss_pred ccccccCCCHHHHHHHHHHHHHcC----CeEEec---ChhhHHHHHHHHHHHHH
Confidence 334467899999999999998764 333443 33455666665555543
No 103
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.31 E-value=7.8e-06 Score=61.70 Aligned_cols=149 Identities=8% Similarity=0.149 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++++. +.+ ..++|.
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 144 (255)
T PRK07523 66 FDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINI 144 (255)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEE
Confidence 488998888887753 799999998632 123344555554 445 667764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++.+......... ..............
T Consensus 145 ss~~~~~~----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~ 217 (255)
T PRK07523 145 ASVQSALA----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD---PEFSAWLEKRTPAG 217 (255)
T ss_pred ccchhccC----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC---HHHHHHHHhcCCCC
Confidence 44221111 12234577788887776542 589999999998876542221100 00000001111112
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
.+...+|+|+++..++.++. . .++.+.+.| +...|
T Consensus 218 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g-g~~~~ 254 (255)
T PRK07523 218 RWGKVEELVGACVFLASDASSFVNGHVLYVDG-GITAS 254 (255)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCcEEEECC-Ceecc
Confidence 36679999999999887643 2 267778874 55443
No 104
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.29 E-value=1.5e-05 Score=59.89 Aligned_cols=146 Identities=8% Similarity=0.067 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~ 52 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.+.- ...++|. |+.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 63 ADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred eccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 47888888777654 5799999998521 122344555555321 0235553 332
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCC-CCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i 125 (191)
.... ...+...|..+|..++.+++. .++.+..++||++........... ....+. ..........++
T Consensus 143 ~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 216 (252)
T PRK06077 143 AGIR----PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKE--FAEKFTLMGKIL 216 (252)
T ss_pred hccC----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHH--HHHhcCcCCCCC
Confidence 2111 112345677889888777653 267788899998765432111110 000000 000111123679
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeec
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
+++|+|+++..++..+...++.+++.+
T Consensus 217 ~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 217 DPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred CHHHHHHHHHHHhCccccCCCeEEecC
Confidence 999999999999987655578888885
No 105
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.27 E-value=1.5e-05 Score=59.50 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=81.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++. +.+ .++++.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~i 140 (248)
T PRK05557 62 GDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINI 140 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 48899988887765 5799999997532 122344555554 455 667664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++ ..++.++.++||++.......... .... ..-......
T Consensus 141 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~~~~----~~~~~~~~~ 211 (248)
T PRK05557 141 SSVVGLMGN----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-DVKE----AILAQIPLG 211 (248)
T ss_pred cccccCcCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-HHHH----HHHhcCCCC
Confidence 432211111 123356677877765543 258899999999875532211100 0000 000011112
Q ss_pred eecchhhHHHHHHHHhcCc--ccCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDP--RTCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~ 152 (191)
.+.+.+|+|+++..++.+. ...++.+++++
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 212 RLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 3568999999998888763 23467888874
No 106
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2.2e-05 Score=60.07 Aligned_cols=145 Identities=10% Similarity=0.144 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..+++++ +++.+ ..++|.
T Consensus 57 ~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~i 135 (277)
T PRK06180 57 LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNI 135 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 48899998887776 4799999998632 1233455555 44555 667763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC---CCCC-ce-EEEec-
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP---FEPH-DD-VVVYG- 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~---~~~~-~~-~~~~~- 116 (191)
|+.+..... .+...|..+|..++.+++. .|+++++++||.+..++....... .... .. .....
T Consensus 136 SS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (277)
T PRK06180 136 TSMGGLITM----PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQ 211 (277)
T ss_pred ecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHH
Confidence 442211111 2244577888877766543 489999999999876432111000 0000 00 00000
Q ss_pred --CCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 117 --NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 117 --~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
.......+.+.+|+|++++.++.++... ..+.++
T Consensus 212 ~~~~~~~~~~~~~~dva~~~~~~l~~~~~~-~~~~~g 247 (277)
T PRK06180 212 AREAKSGKQPGDPAKAAQAILAAVESDEPP-LHLLLG 247 (277)
T ss_pred HHHhhccCCCCCHHHHHHHHHHHHcCCCCC-eeEecc
Confidence 0001124568999999999999876532 334444
No 107
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.24 E-value=1.1e-05 Score=61.47 Aligned_cols=133 Identities=12% Similarity=0.133 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... . .....++..+++.+ ..+++.
T Consensus 56 ~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~v 134 (270)
T PRK05650 56 CDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNI 134 (270)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 48888888777664 5899999998532 0 11234556677777 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+ ..|+.++.++||++..++....... .......-.+....
T Consensus 135 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~ 207 (270)
T PRK05650 135 ASMAGLMQG----PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP---NPAMKAQVGKLLEK 207 (270)
T ss_pred CChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccC---chhHHHHHHHHhhc
Confidence 432211111 123456678877555433 2589999999999877643321110 00000000011123
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++.+|+|+.++.++.+.
T Consensus 208 ~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 208 SPITAADIADYIYQQVAKG 226 (270)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 4689999999999999874
No 108
>PRK09135 pteridine reductase; Provisional
Probab=98.24 E-value=2.8e-05 Score=58.19 Aligned_cols=149 Identities=11% Similarity=0.091 Sum_probs=86.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-------------------CcccHHHHHHHHHHcC--CccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-------------------QFLDQLKIVHAIKVAG--NIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-------------------~~~~~~~li~aa~~~g--~vkr~v~-s~ 51 (191)
+|++|.+++.++++ ++|+|||+++.. ++.+..++++++...- .-.+++. ++
T Consensus 64 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK09135 64 ADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD 143 (249)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC
Confidence 58999999888876 469999999842 1345677888875321 0123332 22
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
... .....+...|..+|..++.+++. .++.++.+||+++++............... . .+.....+.
T Consensus 144 ~~~----~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 215 (249)
T PRK09135 144 IHA----ERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAI--L--ARTPLKRIG 215 (249)
T ss_pred hhh----cCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHH--H--hcCCcCCCc
Confidence 111 11123456788899999888764 258899999998876532211000000000 0 000001123
Q ss_pred chhhHHHHHHHHhcCc-ccCCceeEeecCCCccC
Q 038413 126 YEEDIAKCTIKVINDP-RTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~-~~~~~~~~i~~~~~~~t 158 (191)
+++|+|+++..++.+. ...++.+++++ ++.++
T Consensus 216 ~~~d~a~~~~~~~~~~~~~~g~~~~i~~-g~~~~ 248 (249)
T PRK09135 216 TPEDIAEAVRFLLADASFITGQILAVDG-GRSLT 248 (249)
T ss_pred CHHHHHHHHHHHcCccccccCcEEEECC-Ceecc
Confidence 5899999996666543 33578899985 55443
No 109
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.22 E-value=2.8e-05 Score=57.77 Aligned_cols=144 Identities=11% Similarity=0.083 Sum_probs=84.6
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ ...++.++++.+ ..+++. |
T Consensus 48 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~s 126 (234)
T PRK07577 48 CDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNIC 126 (234)
T ss_pred eeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEc
Confidence 48889888877765 6899999998632 011 344566777777 778764 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.+. ... .....|..+|..++.+.+. .|+.++.++||.+............ ....-.+. .......
T Consensus 127 S~~~-~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~-~~~~~~~ 199 (234)
T PRK07577 127 SRAI-FGA----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG-SEEEKRVL-ASIPMRR 199 (234)
T ss_pred cccc-cCC----CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc-hhHHHHHh-hcCCCCC
Confidence 4321 111 1234677888887766542 5899999999988765432211000 00000000 0000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
....+|+|+++..++.++. ..++.+.+.|
T Consensus 200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g 230 (234)
T PRK07577 200 LGTPEEVAAAIAFLLSDDAGFITGQVLGVDG 230 (234)
T ss_pred CcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence 3468999999999998753 2367777764
No 110
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.21 E-value=3e-05 Score=58.03 Aligned_cols=139 Identities=8% Similarity=0.086 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH-----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK-----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~-----~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++. +.+ .+++|.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~ 144 (249)
T PRK12827 66 FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVN 144 (249)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEE
Confidence 58889988887763 5899999998532 234566777776 455 667664
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..... .+...|..+|...+.+++. .++.++.++||+..+........ . +.+ .. ..+
T Consensus 145 ~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---~-~~~---~~-~~~ 212 (249)
T PRK12827 145 IASVAGVRGN----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP---T-EHL---LN-PVP 212 (249)
T ss_pred ECCchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch---H-HHH---Hh-hCC
Confidence 443221111 1234567788776655432 48999999999877643211100 0 000 00 011
Q ss_pred -eeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 122 -AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 122 -~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++.+... .++.+.+.+
T Consensus 213 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 246 (249)
T PRK12827 213 VQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG 246 (249)
T ss_pred CcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 1235789999999988876432 256777763
No 111
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.21 E-value=1.5e-05 Score=60.97 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++ ++.+ ..+||.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~i 144 (274)
T PRK07775 66 LDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFV 144 (274)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 58899998887775 4699999998632 12234454544 3444 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC--ceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH--DDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~ 120 (191)
|+....... .+...|..+|...+.+++. .|+..+++|||++............... .....++ +..
T Consensus 145 sS~~~~~~~----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~ 219 (274)
T PRK07775 145 GSDVALRQR----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG-QAR 219 (274)
T ss_pred CChHhcCCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc-ccc
Confidence 432211111 1234577889888877653 3899999999987543211100000000 0001111 122
Q ss_pred eeeecchhhHHHHHHHHhcCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
...+++++|+|+++..++..+.
T Consensus 220 ~~~~~~~~dva~a~~~~~~~~~ 241 (274)
T PRK07775 220 HDYFLRASDLARAITFVAETPR 241 (274)
T ss_pred cccccCHHHHHHHHHHHhcCCC
Confidence 3568999999999999998764
No 112
>PRK08017 oxidoreductase; Provisional
Probab=98.20 E-value=2e-05 Score=59.44 Aligned_cols=133 Identities=16% Similarity=0.187 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|.++|+++... +.+ ...+++++++.+ .++++.
T Consensus 52 ~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~ 130 (256)
T PRK08017 52 LDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVM 130 (256)
T ss_pred eecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 47788777666543 3588999987531 011 134578888887 777763
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ ++.... .....|..+|...+.+.+ ..++++++++||.+...+....... . ........+..
T Consensus 131 ~ss~~~~~~~-----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~-~~~~~~~~~~~ 202 (256)
T PRK08017 131 TSSVMGLIST-----PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT--Q-SDKPVENPGIA 202 (256)
T ss_pred EcCcccccCC-----CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch--h-hccchhhhHHH
Confidence 43 332111 123457788888876543 3589999999998765433221110 1 01111122333
Q ss_pred eeeecchhhHHHHHHHHhcCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
++.+++.+|+++.+..++.++.
T Consensus 203 ~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 203 ARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred hhcCCCHHHHHHHHHHHHhCCC
Confidence 4567999999999999998865
No 113
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.20 E-value=2.2e-05 Score=58.88 Aligned_cols=141 Identities=13% Similarity=0.140 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++. +.+ ..+++.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 141 (247)
T PRK12935 63 ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISI 141 (247)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 488999998888765 699999998632 123345555554 344 446553
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .+...|..+|..++.+.+. .++..++++||.+........ +. ........+..+
T Consensus 142 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~---~~~~~~~~~~~~ 211 (247)
T PRK12935 142 SSIIGQAG-G----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PE---EVRQKIVAKIPK 211 (247)
T ss_pred cchhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cH---HHHHHHHHhCCC
Confidence 44 23211 1 2234677888877666432 489999999998765422111 00 000000012223
Q ss_pred eeecchhhHHHHHHHHhcCcc-cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~ 152 (191)
..+.+.+|+++.++.++.... ..++.+++.+
T Consensus 212 ~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~ 243 (247)
T PRK12935 212 KRFGQADEIAKGVVYLCRDGAYITGQQLNING 243 (247)
T ss_pred CCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence 467899999999999887543 2468888874
No 114
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.20 E-value=2e-05 Score=59.08 Aligned_cols=147 Identities=9% Similarity=0.131 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++ ++++++.+ ..+++.
T Consensus 59 ~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~i 137 (250)
T TIGR03206 59 CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNI 137 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58889888887765 4799999997431 1223333 44445666 677664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~ 121 (191)
|+.+..... .....|..+|.+.+.+.+. .++++++++||.+.+...............+ ...-.....
T Consensus 138 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (250)
T TIGR03206 138 ASDAARVGS----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL 213 (250)
T ss_pred CchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc
Confidence 432221111 1133566788766655542 4899999999988775433221100000000 000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+...+|+|+++..++.++. ..++.+.+.+
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence 234678999999999887653 2367788874
No 115
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.19 E-value=3.8e-05 Score=58.46 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+. ..++..+++.+ .+++|.
T Consensus 52 ~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~i 130 (270)
T PRK06179 52 LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINI 130 (270)
T ss_pred eecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 589999999988864 699999998632 1122 33444467778 888774
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecC----
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN---- 117 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~---- 117 (191)
|+ .+... . .....|..+|..++.+++ ..|+++++++||++.+++....... ...+..+..
T Consensus 131 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~ 202 (270)
T PRK06179 131 SSVLGFLP-A----PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEP---DSPLAEYDRERAV 202 (270)
T ss_pred CCccccCC-C----CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCC---CCcchhhHHHHHH
Confidence 43 22211 0 113357788888876654 3589999999998877543322110 000000000
Q ss_pred -----CcceeeecchhhHHHHHHHHhcCcc
Q 038413 118 -----GEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 118 -----g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..........+|+|+.++.++..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 203 VSKAVAKAVKKADAPEVVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence 0001123567899999999988753
No 116
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.19 E-value=0.00011 Score=54.78 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=81.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.+ .+ ..++|. |
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~s 139 (237)
T PRK07326 61 ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINIS 139 (237)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEEC
Confidence 58888888877765 6899999987532 1122345555442 34 456663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+.+ ..|++++.++||++.+++.... .. .....
T Consensus 140 s~~~~~~----~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----~~---------~~~~~ 201 (237)
T PRK07326 140 SLAGTNF----FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----PS---------EKDAW 201 (237)
T ss_pred ChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-----cc---------hhhhc
Confidence 3221111 1123356677776655443 2589999999998876532211 00 00112
Q ss_pred ecchhhHHHHHHHHhcCcc-cCCceeEeecCCCc
Q 038413 124 FNYEEDIAKCTIKVINDPR-TCNRIVIYRPQTNI 156 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~ 156 (191)
.+..+|+|+++..++..+. .....+.+.+ +++
T Consensus 202 ~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~-~~~ 234 (237)
T PRK07326 202 KIQPEDIAQLVLDLLKMPPRTLPSKIEVRP-SRP 234 (237)
T ss_pred cCCHHHHHHHHHHHHhCCccccccceEEec-CCC
Confidence 3789999999999998764 5566677663 443
No 117
>PRK06194 hypothetical protein; Provisional
Probab=98.19 E-value=0.00011 Score=56.42 Aligned_cols=123 Identities=7% Similarity=0.066 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCc------
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNI------ 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~v------ 44 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++ .+++.+ .
T Consensus 62 ~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~ 140 (287)
T PRK06194 62 TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYE 140 (287)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCC
Confidence 589999999888763 699999998642 112333333 355554 3
Q ss_pred cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 45 KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 45 kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
.++|. |+.+..... .+...|..+|...+.+++. .++..+.+.||++....... ...+...+
T Consensus 141 g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~-----~~~~~~~~ 211 (287)
T PRK06194 141 GHIVNTASMAGLLAP----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS-----ERNRPADL 211 (287)
T ss_pred eEEEEeCChhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc-----cccCchhc
Confidence 35553 332211111 1234577889888877653 13455667777654432111 11223444
Q ss_pred ecCCcceeeecchhhHHHH
Q 038413 115 YGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~ 133 (191)
.+++...+++++++|....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~ 230 (287)
T PRK06194 212 ANTAPPTRSQLIAQAMSQK 230 (287)
T ss_pred ccCccccchhhHHHHHHHh
Confidence 5555555566555554443
No 118
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.18 E-value=4.8e-05 Score=56.77 Aligned_cols=124 Identities=13% Similarity=0.125 Sum_probs=75.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ .+++|.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 141 (239)
T PRK07666 63 ADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINI 141 (239)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEE
Confidence 58889998888875 6899999987532 11223344444 3555 667663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+++ ..|++++.++||.+.+....... .. ...+.
T Consensus 142 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----------~~--~~~~~ 205 (239)
T PRK07666 142 SSTAGQKGA----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG----------LT--DGNPD 205 (239)
T ss_pred cchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc----------cc--ccCCC
Confidence 332211111 123346677776665543 35899999999988765321110 00 01123
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.++..+|+|+++..++.++
T Consensus 206 ~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 206 KVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 4678999999999999875
No 119
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.17 E-value=2.1e-05 Score=58.83 Aligned_cols=145 Identities=12% Similarity=0.069 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.+ .+...+++. |+..
T Consensus 60 ~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 139 (245)
T PRK07060 60 LDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQA 139 (245)
T ss_pred ecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHH
Confidence 48889888888876 4799999998632 1234555665543 220246663 4322
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
..... .+...|..+|..++.+++. .++..+.++||.+.++........ ......+. .......+++
T Consensus 140 ~~~~~----~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~ 212 (245)
T PRK07060 140 ALVGL----PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--PQKSGPML-AAIPLGRFAE 212 (245)
T ss_pred HcCCC----CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--HHHHHHHH-hcCCCCCCCC
Confidence 11111 1234677888888876543 478899999998877542211000 00000000 0111235789
Q ss_pred hhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 127 EEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+|+|+++..++.++. . .++.+.+.+
T Consensus 213 ~~d~a~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK07060 213 VDDVAAPILFLLSDAASMVSGVSLPVDG 240 (245)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEeECC
Confidence 9999999999998764 2 367777764
No 120
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.17 E-value=1.2e-05 Score=63.00 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=64.2
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcc-------cCCCC--C---
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFG-------CEEDR--V--- 59 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g-------~~~~~--~--- 59 (191)
+...+......+|.|||+++..+ +.++..+++.|.... .|.|.+ |+.+ .+... .
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~ 155 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEIS 155 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccccc
Confidence 34456666678999999998754 577899999888777 786542 3211 11111 0
Q ss_pred ----CCCCCchhhHHHHHHHHHHHHh---cCCCeEEEeccccccc
Q 038413 60 ----RPLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAY 97 (191)
Q Consensus 60 ----~~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~ 97 (191)
....+..+|..+|+.+|..+++ .|++++|+|||+..+.
T Consensus 156 ~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 156 PTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGD 200 (382)
T ss_pred ccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeecc
Confidence 1112356789999999999986 5899999999988764
No 121
>PRK09186 flagellin modification protein A; Provisional
Probab=98.15 E-value=1.5e-05 Score=60.09 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=84.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------------cccHHHHHHHHHHcCCccEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------------FLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------------~~~~~~li~aa~~~g~vkr~ 47 (191)
+|+.|++++.++++. .|+|||+++... ....+.++.++++.+ .+++
T Consensus 62 ~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~i 140 (256)
T PRK09186 62 LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNL 140 (256)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceE
Confidence 589999998887763 799999985321 122355677777777 7787
Q ss_pred Ec-CC-cccCCC-----CCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEE
Q 038413 48 LP-SE-FGCEED-----RVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV 113 (191)
Q Consensus 48 v~-s~-~g~~~~-----~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~ 113 (191)
|. |+ .+.... ......+...|..+|...+.+.+ ..++.+++++||.+.+.....+... ...
T Consensus 141 v~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~-~~~---- 215 (256)
T PRK09186 141 VNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA-YKK---- 215 (256)
T ss_pred EEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH-HHh----
Confidence 74 33 332111 00001112357778887776654 2478899999997654321111000 000
Q ss_pred EecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 114 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+++.+|+|+++..++.++. . .++.+.+.+
T Consensus 216 ----~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 252 (256)
T PRK09186 216 ----CCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD 252 (256)
T ss_pred ----cCCccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence 0001246889999999999997643 2 256666653
No 122
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.15 E-value=2.1e-05 Score=59.01 Aligned_cols=143 Identities=12% Similarity=0.166 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++. +.+ ..+++.
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 141 (250)
T PRK12939 63 ADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNL 141 (250)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58899988887763 5899999998632 122344555544 333 347664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++. .++.++.++||++..+....... .........+....
T Consensus 142 sS~~~~~~~----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~ 213 (250)
T PRK12939 142 ASDTALWGA----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA----DERHAYYLKGRALE 213 (250)
T ss_pred CchhhccCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC----hHHHHHHHhcCCCC
Confidence 432211111 1123466788887776653 47888999999876543221100 00000011112224
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|+++..++.++. ..|+.+.+.|
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 214 RLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred CCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 56889999999999998653 3478888874
No 123
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.12 E-value=7.3e-05 Score=56.18 Aligned_cols=147 Identities=9% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++++ ++.+ ..+++.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ 133 (252)
T PRK08220 55 LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTV 133 (252)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 488898888887753 799999988632 12233455554 3444 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCce----EEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDD----VVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~----~~~~~~ 117 (191)
|+.+.... ..+...|..+|...+.+++. .++..+.++||++.+........... .... ......
T Consensus 134 ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (252)
T PRK08220 134 GSNAAHVP----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL 209 (252)
T ss_pred CCchhccC----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh
Confidence 44322111 12244577788888776542 57889999999887754322111000 0000 000011
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+.....+++++|+|+++..++.+.. . -++.+.+.+
T Consensus 210 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~g 246 (252)
T PRK08220 210 GIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDG 246 (252)
T ss_pred cCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECC
Confidence 1112357889999999999887642 2 356666663
No 124
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=7.3e-05 Score=55.86 Aligned_cols=142 Identities=10% Similarity=0.080 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ .++++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~ 140 (247)
T PRK05565 62 ADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNI 140 (247)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899998887775 6899999998642 12223344444 4455 566664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++ ..|+.++.++||++.......... ... ..+.......
T Consensus 141 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~-~~~----~~~~~~~~~~ 211 (247)
T PRK05565 141 SSIWGLIGA----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE-EDK----EGLAEEIPLG 211 (247)
T ss_pred CCHhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh-HHH----HHHHhcCCCC
Confidence 442211111 112245567765554443 358999999999876543222110 000 0000001113
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|++++++.++.... -.++.+.+.+
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 243 (247)
T PRK05565 212 RLGKPEEIAKVVLFLASDDASYITGQIITVDG 243 (247)
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence 45688999999999998753 2367777763
No 125
>PRK08324 short chain dehydrogenase; Validated
Probab=98.07 E-value=4.9e-05 Score=65.47 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+..+++++ +++.+ . .++|.
T Consensus 477 ~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~ 555 (681)
T PRK08324 477 CDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVF 555 (681)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 48889888877764 6899999998532 1224455444 44544 4 45553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccc-cccc-cc-ccC-----CCCCCc-eE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYG-AYFV-NV-LLR-----PFEPHD-DV 112 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~-~~~~-~~-~~~-----~~~~~~-~~ 112 (191)
|+....... .....|..+|...+.+++. .|+.++.++|+.++ +..+ .. +.. ...... ..
T Consensus 556 vsS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~ 631 (681)
T PRK08324 556 IASKNAVNPG----PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELE 631 (681)
T ss_pred ECCccccCCC----CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHH
Confidence 442211111 1234677889888877653 36889999999885 3211 11 100 000000 00
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcC--cccCCceeEeecCCCc
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVIND--PRTCNRIVIYRPQTNI 156 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~--~~~~~~~~~i~~~~~~ 156 (191)
..+..+.....+++.+|+|+++..++.. ....++.+++.| +..
T Consensus 632 ~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg-G~~ 676 (681)
T PRK08324 632 EFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG-GNA 676 (681)
T ss_pred HHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC-Cch
Confidence 1233344456789999999999998853 334478888885 543
No 126
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.07 E-value=9e-05 Score=55.73 Aligned_cols=134 Identities=12% Similarity=0.070 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ..+++.++++.+ ..+++.
T Consensus 53 ~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 131 (248)
T PRK10538 53 LDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIIN 131 (248)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58889888877664 6899999987521 011 355667777777 778774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+.... ..+...|..+|...+.+.+. .++..+.++||.+.+..................+ . .
T Consensus 132 isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~-~---~ 203 (248)
T PRK10538 132 IGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-Q---N 203 (248)
T ss_pred ECCcccCCC----CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc-c---c
Confidence 44322111 12234577788877766543 4688899999987643211100000000000001 1 1
Q ss_pred eeecchhhHHHHHHHHhcCccc
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT 143 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~ 143 (191)
..++..+|+|+++..++..++.
T Consensus 204 ~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 204 TVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred cCCCCHHHHHHHHHHHhcCCCc
Confidence 2457899999999999987754
No 127
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.06 E-value=2.9e-05 Score=58.25 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=84.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------cccHHHHHHHHHH----cCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------FLDQLKIVHAIKV----AGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------~~~~~~li~aa~~----~g~vkr~ 47 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.. .+ .+++
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~i 140 (250)
T PRK07774 62 VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAI 140 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEE
Confidence 48888888877664 5799999998521 2234555665553 34 4566
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+. |+.+.. .+...|..+|..++.+++. .++..+.++||.+......... +. ........+.
T Consensus 141 v~~sS~~~~-------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~---~~~~~~~~~~ 209 (250)
T PRK07774 141 VNQSSTAAW-------LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PK---EFVADMVKGI 209 (250)
T ss_pred EEEeccccc-------CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CH---HHHHHHHhcC
Confidence 63 432211 1234677889888877654 3688899999987654322110 00 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
....+.+.+|+|+.+..++.++. ..++.+++.+ ++.+
T Consensus 210 ~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~-g~~~ 248 (250)
T PRK07774 210 PLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG-GQII 248 (250)
T ss_pred CCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC-Ceec
Confidence 01124578999999999888642 3478888885 5544
No 128
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.05 E-value=0.00016 Score=54.74 Aligned_cols=132 Identities=12% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH---cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV---AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~---~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.. .+ ..++| .
T Consensus 57 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~ 135 (263)
T PRK06181 57 TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVV 135 (263)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 58899998888775 5799999987532 1223455565532 23 34555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+++. .++.++.++||++........... ..... ...+....
T Consensus 136 sS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~--~~~~~~~~ 207 (263)
T PRK06181 136 SSLAGLTG----VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG--DGKPL--GKSPMQES 207 (263)
T ss_pred ecccccCC----CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc--ccccc--cccccccc
Confidence 33221111 12234677888887776542 589999999998776432221110 11111 11111223
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++++|+|+++..++...
T Consensus 208 ~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 208 KIMSAEECAEAILPAIARR 226 (263)
T ss_pred CCCCHHHHHHHHHHHhhCC
Confidence 6899999999999999863
No 129
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.00015 Score=54.16 Aligned_cols=126 Identities=13% Similarity=0.170 Sum_probs=76.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+ ...++..+++.+ ..+++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 140 (241)
T PRK07454 62 IDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINV 140 (241)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899988877765 4799999998531 112 233445556666 567664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+ ..|+++++++||++....... .... ......
T Consensus 141 sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~--------~~~~---~~~~~~ 205 (241)
T PRK07454 141 SSIAARNAF----PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT--------ETVQ---ADFDRS 205 (241)
T ss_pred ccHHhCcCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc--------cccc---cccccc
Confidence 332211111 123457778887776543 258999999999876532110 0000 000112
Q ss_pred eecchhhHHHHHHHHhcCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~ 142 (191)
.++..+|+|+++..++.++.
T Consensus 206 ~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 206 AMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred cCCCHHHHHHHHHHHHcCCc
Confidence 45789999999999999874
No 130
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.02 E-value=9.2e-05 Score=55.46 Aligned_cols=142 Identities=11% Similarity=0.155 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ ...++.++++.+ ..+++.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 138 (246)
T PRK12938 60 GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINI 138 (246)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58889888877664 5799999998632 111 344666677777 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+ ..++.++.++||++......... . .............
T Consensus 139 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~----~~~~~~~~~~~~~ 209 (246)
T PRK12938 139 SSVNGQKGQ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P----DVLEKIVATIPVR 209 (246)
T ss_pred echhccCCC----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-h----HHHHHHHhcCCcc
Confidence 432211111 123456678877665543 25789999999987765322110 0 0000000111123
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|++.++..++.++. ..++.+.+.+
T Consensus 210 ~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~ 241 (246)
T PRK12938 210 RLGSPDEIGSIVAWLASEESGFSTGADFSLNG 241 (246)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 35678999999998887642 3366677763
No 131
>PRK07069 short chain dehydrogenase; Validated
Probab=98.00 E-value=6.3e-05 Score=56.45 Aligned_cols=146 Identities=10% Similarity=0.183 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... . ....+++.++++.+ .++++.
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ 136 (251)
T PRK07069 58 QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNI 136 (251)
T ss_pred eecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEe
Confidence 47888888877664 5799999998542 0 13567788888877 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------c--CCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|...+.+.+. . ++..+.++||++.......................+..
T Consensus 137 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 212 (251)
T PRK07069 137 SSVAAFKAE----PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP 212 (251)
T ss_pred cChhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC
Confidence 432211111 1123566788877766542 2 36778899998776543221110000000000001111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
...+.+.+|+|++++.++.++. ..++.+.+.
T Consensus 213 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 245 (251)
T PRK07069 213 LGRLGEPDDVAHAVLYLASDESRFVTGAELVID 245 (251)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 1235679999999998877643 235556665
No 132
>PRK06128 oxidoreductase; Provisional
Probab=97.99 E-value=0.00011 Score=57.05 Aligned_cols=149 Identities=9% Similarity=0.067 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-CccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-NIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++|. |+
T Consensus 113 ~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 58889888777664 5799999998531 223456677775421 0125553 43
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
....... .....|..+|..++.+.+. .|+....++||++.......... .......++.......+
T Consensus 193 ~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~~~p~~r~ 265 (300)
T PRK06128 193 IQSYQPS----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ---PPEKIPDFGSETPMKRP 265 (300)
T ss_pred ccccCCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC---CHHHHHHHhcCCCCCCC
Confidence 2211111 1233577888888776543 48999999999887654221100 00000011111111235
Q ss_pred cchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 125 NYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
...+|+|.++..++.+.. . -++.+.+.| +..+
T Consensus 266 ~~p~dva~~~~~l~s~~~~~~~G~~~~v~g-g~~~ 299 (300)
T PRK06128 266 GQPVEMAPLYVLLASQESSYVTGEVFGVTG-GLLL 299 (300)
T ss_pred cCHHHHHHHHHHHhCccccCccCcEEeeCC-CEeC
Confidence 678999999998887643 2 367888875 5543
No 133
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.98 E-value=9.2e-05 Score=55.30 Aligned_cols=142 Identities=11% Similarity=0.102 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+ ...+++++++.+ ..++|.
T Consensus 59 ~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 137 (245)
T PRK12824 59 LDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINI 137 (245)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEE
Confidence 48889888887765 3799999998532 112 233466667776 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|..++.+++ ..++..+.++||++......... ..............
T Consensus 138 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~ 208 (245)
T PRK12824 138 SSVNGLKGQ----FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG-----PEVLQSIVNQIPMK 208 (245)
T ss_pred CChhhccCC----CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC-----HHHHHHHHhcCCCC
Confidence 443222111 112346678876665544 24788999999988764221110 00000000111112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+++++..++..+. -.++.+.+.+
T Consensus 209 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 209 RLGTPEEIAAAVAFLVSEAAGFITGETISING 240 (245)
T ss_pred CCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 35578999999988886532 2367788874
No 134
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00011 Score=54.45 Aligned_cols=149 Identities=12% Similarity=0.054 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhcc---CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcccCCC
Q 038413 1 GELDEHEKIVSILKE---VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g---~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~ 57 (191)
+|+.|.+++.++++. +|++||+++... ..+..+++++....+ ..++|. |+.+....
T Consensus 52 ~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~ 130 (230)
T PRK07041 52 LDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRP 130 (230)
T ss_pred ccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCC
Confidence 589999999988863 699999987532 122345566555555 567764 43322111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
. .+...|..+|..++.+.+. .++..+.++||++......... ...................+...+|+|+
T Consensus 131 ~----~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~ 205 (230)
T PRK07041 131 S----ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLA-GDAREAMFAAAAERLPARRVGQPEDVAN 205 (230)
T ss_pred C----CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhh-ccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1 2344677899988887764 2466778888876554321110 0000000000000000012346899999
Q ss_pred HHHHHhcCcccCCceeEeecCCCc
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
++..++.++...++.+.+.| +..
T Consensus 206 ~~~~l~~~~~~~G~~~~v~g-g~~ 228 (230)
T PRK07041 206 AILFLAANGFTTGSTVLVDG-GHA 228 (230)
T ss_pred HHHHHhcCCCcCCcEEEeCC-Cee
Confidence 99999987544478888874 443
No 135
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.96 E-value=0.00011 Score=54.62 Aligned_cols=141 Identities=11% Similarity=0.160 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.+++.+ .|+|||+++... ..+..++++++.+ .+ .++++.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~ 133 (239)
T TIGR01830 55 CDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINI 133 (239)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 488899988887754 599999998642 1234556666654 45 567764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ ..|+.++.++||.+........ ...... . +.. .....
T Consensus 134 sS~~~~~g~----~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~-~~~~~~-~--~~~-~~~~~ 204 (239)
T TIGR01830 134 SSVVGLMGN----AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL-SEKVKK-K--ILS-QIPLG 204 (239)
T ss_pred CCccccCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc-ChHHHH-H--HHh-cCCcC
Confidence 432211111 112346667766555433 2589999999997654321110 000000 0 000 00012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.+.+.+|+|+++..++.++. ..++.+++.
T Consensus 205 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01830 205 RFGTPEEVANAVAFLASDEASYITGQVIHVD 235 (239)
T ss_pred CCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence 35679999999988886542 346777876
No 136
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.91 E-value=7.6e-05 Score=56.40 Aligned_cols=147 Identities=9% Similarity=0.027 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHH----HHHHHHHHcCCcc-EEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQL----KIVHAIKVAGNIK-RFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~----~li~aa~~~g~vk-r~v~ 49 (191)
+|++|.+++.+++. ..|+|||+++... +.+.. .++..+++.+ .+ +++.
T Consensus 60 ~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~ 138 (259)
T PRK12384 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQ 138 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEE
Confidence 48888888877764 4699999997532 12223 3444444455 33 5553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccc-ccccC-----CCC-CCceEEE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFV-NVLLR-----PFE-PHDDVVV 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~-~~~~~-----~~~-~~~~~~~ 114 (191)
|+....... .....|..+|...+.+++ ..|+....++||.+++... ..... ... .......
T Consensus 139 ~ss~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (259)
T PRK12384 139 INSKSGKVGS----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQY 214 (259)
T ss_pred ecCcccccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHH
Confidence 332111110 113356778887655543 3589999999997654211 11100 000 0001111
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.++.....+++.+|++.++..++.+.. ..++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~ 254 (259)
T PRK12384 215 YIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTG 254 (259)
T ss_pred HHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcC
Confidence 2223333567899999999998887643 2368888874
No 137
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.89 E-value=0.00016 Score=54.68 Aligned_cols=146 Identities=12% Similarity=0.142 Sum_probs=82.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc-----CCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA-----GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~-----g~vkr~v~ 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++.+. + ..++|.
T Consensus 68 ~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~ 146 (259)
T PRK08213 68 ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIIN 146 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence 58999988876653 4799999988531 23456677766543 5 667764
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..........+...|..+|...+.+++. .++.++.++||++.......... .... .. . .....
T Consensus 147 ~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~-~~--~-~~~~~ 221 (259)
T PRK08213 147 VASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-RLGE-DL--L-AHTPL 221 (259)
T ss_pred ECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-HHHH-HH--H-hcCCC
Confidence 43221111111011235677889888877653 47888999998876532211100 0000 00 0 01001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|+++..++.... . .++.+.+.+
T Consensus 222 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 254 (259)
T PRK08213 222 GRLGDDEDLKGAALLLASDASKHITGQILAVDG 254 (259)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 123468999998888886542 3 367777763
No 138
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.87 E-value=0.00039 Score=52.34 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCC-----
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGN----- 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~----- 43 (191)
+|++|.+++.++++ ..|+|||+++... +.+..++++++.+ ...
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 59 ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 58889888776654 5799999987521 2234555555543 210
Q ss_pred ccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
+++++. |+....... .+...|..+|..++.+++. .|++.++++||.+.......... ... . ..
T Consensus 139 ~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~--~--~~ 209 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-KYD--A--LI 209 (256)
T ss_pred CcEEEEECChhhccCC----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-hHH--h--hh
Confidence 345553 432211111 1234577888888766542 57899999999877643221100 000 0 00
Q ss_pred cCCcc-eeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 116 GNGEA-KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 116 ~~g~~-~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
..+.. ...+.+..|+|+++..++.... ..++.+++.+ +..
T Consensus 210 ~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g-g~~ 252 (256)
T PRK12745 210 AKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG-GLS 252 (256)
T ss_pred hhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC-Cee
Confidence 00111 1246689999999888886542 2367888874 443
No 139
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.0002 Score=53.87 Aligned_cols=143 Identities=11% Similarity=0.114 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++. +.+ ..++|.
T Consensus 68 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 146 (255)
T PRK06841 68 CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNL 146 (255)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888888877664 5799999998632 223445555544 445 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+.+. .|+..+.++||++......... ..........+....
T Consensus 147 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~ 218 (255)
T PRK06841 147 ASQAGVVAL----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW----AGEKGERAKKLIPAG 218 (255)
T ss_pred cchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc----chhHHHHHHhcCCCC
Confidence 442211111 1123567788877766543 4788899999987664322110 000000000111113
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.+.+|+|+.++.++.++. . .++.+.+.|
T Consensus 219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg 250 (255)
T PRK06841 219 RFAYPEEIAAAALFLASDAAAMITGENLVIDG 250 (255)
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 46789999999999998753 2 367777764
No 140
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00052 Score=54.13 Aligned_cols=135 Identities=11% Similarity=0.107 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +..+..++..+++.+ ..++|.
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~i 142 (334)
T PRK07109 64 ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQV 142 (334)
T ss_pred ecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEe
Confidence 58899998887754 5899999998531 112355677777766 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|..++.+.+. .++.++.++||.+..+....... ... .....
T Consensus 143 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-~~~-------~~~~~ 210 (334)
T PRK07109 143 GSALAYRSI----PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-RLP-------VEPQP 210 (334)
T ss_pred CChhhccCC----CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-hcc-------ccccC
Confidence 432211111 1234577788877655432 36889999999876643222110 000 00011
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
...+.+.+|+|++++.++.++ ++.+.++
T Consensus 211 ~~~~~~pe~vA~~i~~~~~~~---~~~~~vg 238 (334)
T PRK07109 211 VPPIYQPEVVADAILYAAEHP---RRELWVG 238 (334)
T ss_pred CCCCCCHHHHHHHHHHHHhCC---CcEEEeC
Confidence 124568999999999999886 3455554
No 141
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.79 E-value=0.0003 Score=53.06 Aligned_cols=144 Identities=10% Similarity=0.138 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+ ...+++++++.+ ..++|.
T Consensus 67 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 145 (256)
T PRK06124 67 FDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAI 145 (256)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899888887765 3589999988532 111 233345555566 677764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+++. .++..+.++||.+................. ........
T Consensus 146 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~ 218 (256)
T PRK06124 146 TSIAGQVAR----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPW---LAQRTPLG 218 (256)
T ss_pred eechhccCC----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHH---HHhcCCCC
Confidence 432211111 1123566778777666542 478899999998877532211100000000 00000112
Q ss_pred eecchhhHHHHHHHHhcCcccC--CceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRTC--NRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~ 152 (191)
.+++.+|+++++..++.++..+ ++.+.+.+
T Consensus 219 ~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg 250 (256)
T PRK06124 219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVDG 250 (256)
T ss_pred CCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence 3678999999999999875322 56666653
No 142
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00039 Score=51.96 Aligned_cols=143 Identities=9% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~ 52 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.+.- .-.+++. |+.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 62 ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 48899998888876 5899999998532 233455566665431 0235553 432
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
+..... .+...|..+|..++.+++. .++.++.++||++........... ..............+.
T Consensus 142 ~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~ 213 (245)
T PRK12937 142 VIALPL----PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA----EQIDQLAGLAPLERLG 213 (245)
T ss_pred cccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH----HHHHHHHhcCCCCCCC
Confidence 221111 2234577888888877653 478888999997655321110000 0000000011112345
Q ss_pred chhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 126 YEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
+.+|+|+++..++.++. . .++.+.+.
T Consensus 214 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 241 (245)
T PRK12937 214 TPEEIAAAVAFLAGPDGAWVNGQVLRVN 241 (245)
T ss_pred CHHHHHHHHHHHcCccccCccccEEEeC
Confidence 78999999988887653 2 25666665
No 143
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.77 E-value=0.00032 Score=52.92 Aligned_cols=147 Identities=11% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~i 136 (255)
T PRK06463 58 CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNI 136 (255)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48899998887765 4799999997631 111 355566666555 556663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.... ......|..+|..++.+.+. .|+..+.++||++...........................
T Consensus 137 sS~~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T PRK06463 137 ASNAGIGTA----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL 212 (255)
T ss_pred cCHHhCCCC----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc
Confidence 33 222110 01223477789888776653 4788899999987553221110000000000000011111
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|++++.++.++. . .++.+.+.|
T Consensus 213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 213 KTTGKPEDIANIVLFLASDDARYITGQVIVADG 245 (255)
T ss_pred CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 234678999999999987653 2 356677763
No 144
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.0011 Score=50.06 Aligned_cols=145 Identities=16% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc----CCccEEEcC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA----GNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~----g~vkr~v~s 50 (191)
+|+.|.+++.++++ +.|++||+++... ..+...+++++.+. | .-.++.|
T Consensus 68 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~iv~~~s 146 (257)
T PRK12744 68 ADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG-KIVTLVT 146 (257)
T ss_pred cCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CEEEEec
Confidence 58899988887765 4799999998631 12234455655432 3 1122323
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceEEEecCCcce
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 121 (191)
+ .+... .....|..+|..++.+.+. .++..+.++||++............. ..............
T Consensus 147 s~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T PRK12744 147 SLLGAFT------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSK 220 (257)
T ss_pred chhcccC------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccccccccccccc
Confidence 3 22211 1133577889988887664 36889999999987653211111000 00000000011111
Q ss_pred eeecchhhHHHHHHHHhcCccc-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++..... .++.+.+.+
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 221 TGLTDIEDIVPFIRFLVTDGWWITGQTILING 252 (257)
T ss_pred CCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence 2467899999999999885332 267777764
No 145
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00035 Score=52.65 Aligned_cols=147 Identities=11% Similarity=0.118 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC--CccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG--NIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g--~vkr~v~-s 50 (191)
+|++|.+++.++++ ..|+|||+++... ..+...+++++.+.- ...++|. |
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~s 140 (258)
T PRK07890 61 TDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMIN 140 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 48888888876664 4799999997531 122345566665421 0236663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-C----CC-CceEEEecC
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-F----EP-HDDVVVYGN 117 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-~----~~-~~~~~~~~~ 117 (191)
+....... .+...|..+|..++.+++. .++..+.++||.+++.....+... . .. .........
T Consensus 141 S~~~~~~~----~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK07890 141 SMVLRHSQ----PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA 216 (258)
T ss_pred chhhccCC----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh
Confidence 32221111 1234577788887766653 478999999999877543321110 0 00 000000001
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
......+.+.+|+|+++..++.+.. .-++.+.+.
T Consensus 217 ~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~ 252 (258)
T PRK07890 217 NSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVN 252 (258)
T ss_pred cCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeC
Confidence 1111246789999999988887532 235656565
No 146
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00086 Score=50.68 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----c------------------ccHHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----F------------------LDQLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----~------------------~~~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+++++++... . ...+.+++++++.+ ..+++. |
T Consensus 67 ~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~is 145 (253)
T PRK07904 67 FDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMS 145 (253)
T ss_pred ecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEe
Confidence 47888777554443 6899999887532 0 11245778888887 778763 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|.....+ +...++++++++||++........ . . ...
T Consensus 146 S~~g~~~~----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-----~----------~-~~~ 205 (253)
T PRK07904 146 SVAGERVR----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-----K----------E-APL 205 (253)
T ss_pred chhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-----C----------C-CCC
Confidence 43211111 1223466777766533 334689999999998776432110 0 0 012
Q ss_pred ecchhhHHHHHHHHhcCcc
Q 038413 124 FNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~ 142 (191)
.++.+|+|+.++..+.+++
T Consensus 206 ~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 206 TVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 4689999999999998753
No 147
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.72 E-value=0.0014 Score=53.39 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=102.9
Q ss_pred HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC-cccCC----CC-C-C-CC---
Q 038413 7 EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE-FGCEE----DR-V-R-PL--- 62 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~-~g~~~----~~-~-~-~~--- 62 (191)
.++....+.+++|||+|+... ..+++++++-|++....+-|+. |. |.... .+ . . ..
T Consensus 98 ~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~ 177 (467)
T KOG1221|consen 98 SDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCN 177 (467)
T ss_pred HHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCC
Confidence 344445679999999999753 4678999999998754566663 22 21100 00 0 0 00
Q ss_pred -----------------------CC--chhhHHHHHHHHHHHHh--cCCCeEEEecccccccc----cccccC---C---
Q 038413 63 -----------------------PP--FEAYLEKKRIVRRAIEA--VEIPYTFVSANCYGAYF----VNVLLR---P--- 105 (191)
Q Consensus 63 -----------------------~~--~~~~~~~k~~~e~~l~~--~~~~~tilrp~~~~~~~----~~~~~~---~--- 105 (191)
.. ...|.-.|.-+|+.+.+ .++|.+|+||+.....+ .++... +
T Consensus 178 ~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~ 257 (467)
T KOG1221|consen 178 PEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGV 257 (467)
T ss_pred HHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceE
Confidence 00 11234467777888775 57999999998766432 122111 1
Q ss_pred --CCCCceEE-EecCCcceeeecchhhHHHHHHHHhcC-----cccCCceeEeecC-CCccCHHHHHHHHHHHhC
Q 038413 106 --FEPHDDVV-VYGNGEAKAVFNYEEDIAKCTIKVIND-----PRTCNRIVIYRPQ-TNIISQLELISLWEQKTG 171 (191)
Q Consensus 106 --~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~-----~~~~~~~~~i~~~-~~~~t~~e~~~~~~~~~g 171 (191)
....|.+. +..+.+...++|-+|.++.+++.+.-. ++....+|+++++ ...+|+.++++...+..-
T Consensus 258 i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 258 IIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred EEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 11334444 455667778999999999998876622 1112457888852 367999999999988775
No 148
>PLN02253 xanthoxin dehydrogenase
Probab=97.71 E-value=0.00045 Score=52.84 Aligned_cols=153 Identities=11% Similarity=0.049 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v 48 (191)
+|+.|.+++.++++ ++|++||+++... ..+..++++++.+ .+ -.+++
T Consensus 73 ~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii 151 (280)
T PLN02253 73 CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIV 151 (280)
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEE
Confidence 48899998888775 5899999997531 1223445555542 22 22443
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceE----EE
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDV----VV 114 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~----~~ 114 (191)
.++ .+... . .....|..+|..++.+.+. .++....++||.+............. ....+ ..
T Consensus 152 ~isS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 226 (280)
T PLN02253 152 SLCSVASAIG-G----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAF 226 (280)
T ss_pred EecChhhccc-C----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHH
Confidence 333 22111 1 1123577899988877653 37888999999876532211100000 00000 00
Q ss_pred ecCCc-ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccCHH
Q 038413 115 YGNGE-AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIISQL 160 (191)
Q Consensus 115 ~~~g~-~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t~~ 160 (191)
..... .....++.+|+|+++..++.++. . .++.+.+.| +...+..
T Consensus 227 ~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg-G~~~~~~ 274 (280)
T PLN02253 227 AGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG-GFTCTNH 274 (280)
T ss_pred hhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC-chhhccc
Confidence 00110 01234789999999999887643 2 367788874 5444433
No 149
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.71 E-value=0.00076 Score=50.95 Aligned_cols=144 Identities=10% Similarity=0.031 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC----C--------------------cccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP----Q--------------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~----~--------------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++.. . ......++..+++.+ ..++|.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~ 141 (260)
T PRK12823 63 ADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVN 141 (260)
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEE
Confidence 47888877776654 579999999742 1 011245667776776 667663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccc---ccCCCCCCceEEE----
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNV---LLRPFEPHDDVVV---- 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~---~~~~~~~~~~~~~---- 114 (191)
|+.... . .+..+|..+|...+.+.+. .|+..+.++||+........ ..... ......+
T Consensus 142 ~sS~~~~-~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~ 214 (260)
T PRK12823 142 VSSIATR-G-----INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQS-EQEKAWYQQIV 214 (260)
T ss_pred EcCcccc-C-----CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccc-ccccccHHHHH
Confidence 442211 1 1233577889888876653 47899999999887642110 00000 0000000
Q ss_pred --ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 --YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 --~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.-.+....-+.+.+|+|+++..++.+.. ..++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g 256 (260)
T PRK12823 215 DQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGG 256 (260)
T ss_pred HHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence 0001101124578999999999887643 2367777764
No 150
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00039 Score=53.25 Aligned_cols=92 Identities=18% Similarity=0.278 Sum_probs=63.2
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+ ..++++++++.+ ..++|.
T Consensus 54 ~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~ 132 (277)
T PRK05993 54 LDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQ 132 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 58899888877664 3699999987532 111 467888888888 778774
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYF 98 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~ 98 (191)
|+ .+... ..+...|..+|..++.+.+ ..|+.+++++||++...+
T Consensus 133 isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 133 CSSILGLVP-----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred ECChhhcCC-----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 43 33211 1224467789998887754 358999999999877643
No 151
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.69 E-value=0.00077 Score=50.75 Aligned_cols=144 Identities=8% Similarity=0.119 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. ..|+|+|+++... ..+..++++ .+++.+ ..++|.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 143 (254)
T PRK08085 65 FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINI 143 (254)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 48888888877764 4799999998532 112223334 444455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+.+. .|+..+.++||++........... + .............
T Consensus 144 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~-~~~~~~~~~~p~~ 216 (254)
T PRK08085 144 CSMQSELGR----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--E-AFTAWLCKRTPAA 216 (254)
T ss_pred ccchhccCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--H-HHHHHHHhcCCCC
Confidence 443211111 1234577888887777653 489999999998876533221100 0 0000000111112
Q ss_pred eecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.+...+|||.++..++.+. .. -++.+.+.|
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg 248 (254)
T PRK08085 217 RWGDPQELIGAAVFLSSKASDFVNGHLLFVDG 248 (254)
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 3567899999988888763 23 256666663
No 152
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.68 E-value=0.00059 Score=50.83 Aligned_cols=142 Identities=10% Similarity=0.101 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ .+|+|||+++... ..+ ...++..+++.+ +.+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 135 (242)
T TIGR01829 57 GDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINI 135 (242)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48888888777654 4799999997531 111 233566667777 777663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+++ ..++..+.++||++.++....... . ....+-......
T Consensus 136 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~----~~~~~~~~~~~~ 206 (242)
T TIGR01829 136 SSVNGQKGQ----FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-D----VLNSIVAQIPVG 206 (242)
T ss_pred cchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-H----HHHHHHhcCCCC
Confidence 432211111 112346667776655443 258899999999887653221100 0 000000000111
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+++++..++.++. ..++.+.+.|
T Consensus 207 ~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~g 238 (242)
T TIGR01829 207 RLGRPEEIAAAVAFLASEEAGYITGATLSING 238 (242)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence 23457899999887776642 3367777764
No 153
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00019 Score=54.17 Aligned_cols=147 Identities=9% Similarity=0.057 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHHH---cCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIKV---AGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~~---~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++.+++.+ .+ ..+++. |+
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss 140 (258)
T PRK08628 62 VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISS 140 (258)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECC
Confidence 58899998887775 4799999998431 1112334444332 23 346653 43
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CCCCCceE-EEecCCccee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PFEPHDDV-VVYGNGEAKA 122 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~~~ 122 (191)
....... .+...|..+|..++.+.+. .++..+.++||.+.+.....+.. ........ .+........
T Consensus 141 ~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK08628 141 KTALTGQ----GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGH 216 (258)
T ss_pred HHhccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccc
Confidence 2211111 1234577889888777653 47889999999988764322111 00000000 0000000012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|++++.++..+. ..++.+.+.+
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 248 (258)
T PRK08628 217 RMTTAEEIADTAVFLLSERSSHTTGQWLFVDG 248 (258)
T ss_pred cCCCHHHHHHHHHHHhChhhccccCceEEecC
Confidence 46789999999999998652 3367777763
No 154
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00056 Score=51.67 Aligned_cols=146 Identities=10% Similarity=0.064 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC---CccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG---NIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g---~vkr~v~-s 50 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.... .-.+++. +
T Consensus 66 ~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 66 ADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 58899998888775 3699999998531 223455566555422 0234442 2
Q ss_pred CcccCCCCCCCCCC-chhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+..... ..| ...|..+|..++.+.+. .++..+.++||+........... .. ........ ..
T Consensus 146 s~~~~~-----~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~-~~~~~~~~----~~ 213 (258)
T PRK09134 146 DQRVWN-----LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPED--FA-RQHAATPL----GR 213 (258)
T ss_pred chhhcC-----CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHH--HH-HHHhcCCC----CC
Confidence 211100 122 24677899877766553 23778889998765432100000 00 00000000 12
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCH
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~ 159 (191)
..+++|+|+++..+++.+...++.+.+.+ +..+++
T Consensus 214 ~~~~~d~a~~~~~~~~~~~~~g~~~~i~g-g~~~~~ 248 (258)
T PRK09134 214 GSTPEEIAAAVRYLLDAPSVTGQMIAVDG-GQHLAW 248 (258)
T ss_pred CcCHHHHHHHHHHHhcCCCcCCCEEEECC-Ceeccc
Confidence 36799999999999987655578888874 454443
No 155
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.63 E-value=0.00087 Score=49.98 Aligned_cols=142 Identities=6% Similarity=0.107 Sum_probs=77.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 137 (245)
T PRK12936 59 ANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINI 137 (245)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEE
Confidence 48888888877653 5899999998531 12233444544 3345 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+........ ....|..+|..++.+++ ..++..+.++||++........ ... ..... . ......
T Consensus 138 sS~~~~~~~~----~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~-~~~~~--~-~~~~~~ 208 (245)
T PRK12936 138 TSVVGVTGNP----GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDK-QKEAI--M-GAIPMK 208 (245)
T ss_pred CCHHhCcCCC----CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChH-HHHHH--h-cCCCCC
Confidence 4422111111 12245667765554433 2579999999997755322111 000 00000 0 000112
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+...+|+++++..++.++.. .++.+.+.+
T Consensus 209 ~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12936 209 RMGTGAEVASAVAYLASSEAAYVTGQTIHVNG 240 (245)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 245689999999888876432 367788774
No 156
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0017 Score=49.08 Aligned_cols=120 Identities=12% Similarity=0.178 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccH----HHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQ----LKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~----~~li~aa~~~g~vkr~v- 48 (191)
+|++|.+++.++++. .|++||+++... +.+. ..++.++++.+ ..++|
T Consensus 57 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~ 135 (257)
T PRK07024 57 ADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVG 135 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEE
Confidence 589999998887653 699999987531 1122 23455777776 66766
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|| .+... . .....|..+|..++.+.+ ..|++++.++||++........ . ..
T Consensus 136 isS~~~~~~-~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~----------~~ 195 (257)
T PRK07024 136 IASVAGVRG-L----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----P----------YP 195 (257)
T ss_pred EechhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----C----------CC
Confidence 333 22211 0 113357788888877653 3589999999998766421110 0 00
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.-.+++.+|+|+.+..++.+.
T Consensus 196 ~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 196 MPFLMDADRFAARAARAIARG 216 (257)
T ss_pred CCCccCHHHHHHHHHHHHhCC
Confidence 001357999999999999864
No 157
>PRK12743 oxidoreductase; Provisional
Probab=97.60 E-value=0.00088 Score=50.58 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..++++++.. .+.-.++|.
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 59 LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 48889888777664 4799999998532 1223445555443 221135653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+++. .++..+.++||++........ ..... ..... +....
T Consensus 139 sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~--~~~~~--~~~~~ 209 (256)
T PRK12743 139 TSVHEHTP----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVK--PDSRP--GIPLG 209 (256)
T ss_pred eeccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHH--HHHHh--cCCCC
Confidence 44321111 12244677788887766543 478899999998776432110 00000 00000 00011
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.+.+|+|+++..++..+. . .++.+.+.|
T Consensus 210 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg 241 (256)
T PRK12743 210 RPGDTHEIASLVAWLCSEGASYTTGQSLIVDG 241 (256)
T ss_pred CCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 24578999999988887643 2 367777774
No 158
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00071 Score=50.65 Aligned_cols=144 Identities=8% Similarity=0.068 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-----Ccc-EE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-----NIK-RF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-----~vk-r~ 47 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.+.- ..+ ++
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~i 138 (248)
T PRK06123 59 ADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAI 138 (248)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence 48889888888775 5799999998642 122344555554321 011 34
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+ .|+........ .....|..+|..++.+++. .|++++++|||.+.+........+ ..+..... .
T Consensus 139 v~~sS~~~~~~~~---~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~----~~~~~~~~-~ 210 (248)
T PRK06123 139 VNVSSMAARLGSP---GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP----GRVDRVKA-G 210 (248)
T ss_pred EEECchhhcCCCC---CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH----HHHHHHHh-c
Confidence 4 34422111110 1113477889888876542 489999999998876532211100 00000000 0
Q ss_pred cee-eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 120 AKA-VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 120 ~~~-~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+. -..+.+|+++++..++.... ..++.+.+.|
T Consensus 211 ~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 211 IPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence 011 12468999999999887542 2367777763
No 159
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.59 E-value=0.00091 Score=50.52 Aligned_cols=144 Identities=9% Similarity=0.116 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+ .+.++..+++.+ ..+++.
T Consensus 70 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 148 (258)
T PRK06935 70 VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINI 148 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58889888887775 5799999998531 112 233445555665 556553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+. .|+..+.++||++.......... .....-... ......
T Consensus 149 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~-~~~~~~ 221 (258)
T PRK06935 149 ASMLSFQGG----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA--DKNRNDEIL-KRIPAG 221 (258)
T ss_pred CCHHhccCC----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc--ChHHHHHHH-hcCCCC
Confidence 432211110 1123567788888776553 47889999999876543211100 000000000 000012
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+...+|+|..+..++.+.. . .++++.+.|
T Consensus 222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 253 (258)
T PRK06935 222 RWGEPDDLMGAAVFLASRASDYVNGHILAVDG 253 (258)
T ss_pred CCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 35678999999998887643 2 366677663
No 160
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00068 Score=50.54 Aligned_cols=167 Identities=14% Similarity=0.153 Sum_probs=101.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCC---ccEEEcC--C-cccCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGN---IKRFLPS--E-FGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~---vkr~v~s--~-~g~~~~ 57 (191)
||++|...|.+.+. ..+-|||+++... ..++.+|++|.+.++- ||.+-.| + ||--..
T Consensus 90 gDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e 169 (376)
T KOG1372|consen 90 GDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQE 169 (376)
T ss_pred ccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccC
Confidence 79999999998886 5688899888653 2457999999998761 3333333 2 663211
Q ss_pred ----CCCCCCCchhhHHHHHHHH----HHHHhcCCCeEEEeccccccccccc----cc---------CCCCCCceEEEec
Q 038413 58 ----RVRPLPPFEAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAYFVNV----LL---------RPFEPHDDVVVYG 116 (191)
Q Consensus 58 ----~~~~~~~~~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~~~~~----~~---------~~~~~~~~~~~~~ 116 (191)
+..+..|.+||..+|...- .+=+++++= -+.|..+..-.|+ |. .+.+....-...|
T Consensus 170 ~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LG 246 (376)
T KOG1372|consen 170 IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELG 246 (376)
T ss_pred CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEec
Confidence 1223457788887775331 111111110 0111111110111 10 1112222334566
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
+-+.+++|-+..|.++++-.+|++... ..|.|+. ++.-|.+|+.+.-=...|+.
T Consensus 247 NL~a~RDWGhA~dYVEAMW~mLQ~d~P--dDfViAT-ge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 247 NLSALRDWGHAGDYVEAMWLMLQQDSP--DDFVIAT-GEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred chhhhcccchhHHHHHHHHHHHhcCCC--CceEEec-CCcccHHHHHHHHHHhhCcE
Confidence 778889999999999999888887542 4566664 79999999999887777754
No 161
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0012 Score=49.74 Aligned_cols=148 Identities=10% Similarity=0.096 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHH----c-CCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKV----A-GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~-g~vkr~v~ 49 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++.. . + ..++|.
T Consensus 54 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~ii~ 132 (252)
T PRK07856 54 ADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-GGSIVN 132 (252)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEE
Confidence 588898888887754 599999997532 1233445555442 2 2 346553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+++. ..+....++||+........... ...............
T Consensus 133 isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 205 (252)
T PRK07856 133 IGSVSGRRPS----PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG---DAEGIAAVAATVPLG 205 (252)
T ss_pred EcccccCCCC----CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc---CHHHHHHHhhcCCCC
Confidence 443221111 1234577889888877764 12566778898776543211100 000000000000012
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.+...+|+|+.+..++.++. . -++.+.+.+ +...
T Consensus 206 ~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg-g~~~ 241 (252)
T PRK07856 206 RLATPADIAWACLFLASDLASYVSGANLEVHG-GGER 241 (252)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccCCEEEECC-Ccch
Confidence 24578999999999887643 2 367778875 4443
No 162
>PRK08264 short chain dehydrogenase; Validated
Probab=97.56 E-value=0.0016 Score=48.43 Aligned_cols=118 Identities=10% Similarity=0.119 Sum_probs=73.9
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCC-CC-------------------cccHHHHHHHH----HHcCCccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAY-PQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~-~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s~~ 52 (191)
+|+.|.+++.++++ ..|+|||+++. .. ..+..++++++ ++.+ ..+++. |+.
T Consensus 56 ~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~ 134 (238)
T PRK08264 56 LDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSV 134 (238)
T ss_pred ecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCh
Confidence 58899999888876 47999999987 21 12334555554 3455 667763 432
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
..... ..+...|..+|..++.+.+. .++++++++|+........ .. ....+
T Consensus 135 ~~~~~----~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~----------------~~--~~~~~ 192 (238)
T PRK08264 135 LSWVN----FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA----------------GL--DAPKA 192 (238)
T ss_pred hhccC----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc----------------cC--CcCCC
Confidence 21111 12234577788888766543 4889999999876442100 00 11257
Q ss_pred chhhHHHHHHHHhcCc
Q 038413 126 YEEDIAKCTIKVINDP 141 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~ 141 (191)
+.+|+++.++..+...
T Consensus 193 ~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 193 SPADVARQILDALEAG 208 (238)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 7899999999988763
No 163
>PRK06196 oxidoreductase; Provisional
Probab=97.55 E-value=0.00097 Score=52.05 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------cc----cHHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FL----DQLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~----~~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ ++|+|||+++... .. .+..++.++++.+ ..|+|. |+
T Consensus 78 ~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 78 LDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 58899888877663 5899999998531 11 1355666777776 567663 44
Q ss_pred cccCC-----CC---CCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 52 FGCEE-----DR---VRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 52 ~g~~~-----~~---~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
.+... .. .....+...|..+|...+.+.+ ..|+.++.++||++.++........ .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~ 234 (315)
T PRK06196 157 AGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE--EQVALGWVD 234 (315)
T ss_pred HHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh--hhhhhhhhh
Confidence 32111 00 0011223457788888776543 2589999999999877643221100 000000000
Q ss_pred CCccee--eecchhhHHHHHHHHhcCcc
Q 038413 117 NGEAKA--VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 117 ~g~~~~--~~i~~~Dva~~~~~~l~~~~ 142 (191)
....+. .+...+|+|..++.++..++
T Consensus 235 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 235 EHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred hhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 000011 24568999999999887654
No 164
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0011 Score=49.99 Aligned_cols=152 Identities=11% Similarity=0.056 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.+++ .+.|+|||+++... ..+ .+.++..+++.+ ..++|
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii 134 (260)
T PRK06523 56 ADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVII 134 (260)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEE
Confidence 5888888776554 35799999998421 111 234455556666 56666
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-C----CCC--C--ce
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-P----FEP--H--DD 111 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~----~~~--~--~~ 111 (191)
. |+....... ..+...|..+|..++.+++. .|+....++||.+.......+.. . ... . ..
T Consensus 135 ~isS~~~~~~~---~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 211 (260)
T PRK06523 135 HVTSIQRRLPL---PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI 211 (260)
T ss_pred EEecccccCCC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence 3 432211110 11244677888888766543 47899999999887653221100 0 000 0 00
Q ss_pred E-EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 112 V-VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 112 ~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
+ ... .+.....+...+|+|+++..++.+.. . -++.+.+.| +...|
T Consensus 212 ~~~~~-~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg-g~~~~ 259 (260)
T PRK06523 212 IMDSL-GGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG-GTVPT 259 (260)
T ss_pred HHHHh-ccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecC-CccCC
Confidence 0 000 00001124578999999999987642 2 367788874 55544
No 165
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.0016 Score=48.88 Aligned_cols=143 Identities=10% Similarity=0.161 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhcc--------CcEEEEccCCC---------C----------------cccHHHHHHHHH----HcCC
Q 038413 1 GELDEHEKIVSILKE--------VDVVISTVAYP---------Q----------------FLDQLKIVHAIK----VAGN 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--------~d~V~~~~~~~---------~----------------~~~~~~li~aa~----~~g~ 43 (191)
+|+.|.+++.++++. .|++||+++.. . ..+..++++++. +.+
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 137 (253)
T PRK08642 59 ADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG- 137 (253)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-
Confidence 588898888877753 89999998641 0 123345555554 444
Q ss_pred ccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
..+++. ++..... ...+...|..+|...+.+++. .|+....++||++......... ........
T Consensus 138 ~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~ 209 (253)
T PRK08642 138 FGRIINIGTNLFQN----PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT----PDEVFDLI 209 (253)
T ss_pred CeEEEEECCccccC----CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC----CHHHHHHH
Confidence 456653 3321111 112345688899998888764 3677888999987553211100 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
........+.+.+|+|+++..++.++. .-|+.+.+.|
T Consensus 210 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 210 AATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG 248 (253)
T ss_pred HhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 001111246789999999999998643 2367777764
No 166
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0016 Score=49.15 Aligned_cols=144 Identities=8% Similarity=0.059 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +.+. +.++.++++.+ ..++|.
T Consensus 65 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 143 (254)
T PRK06114 65 ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNI 143 (254)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48889888887765 3599999998632 1222 33445555555 456653
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+...... .+...|..+|..++.+.+. .|+....++||++....... +.... ...........
T Consensus 144 sS~~~~~~~~~---~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~---~~~~~-~~~~~~~~~p~ 216 (254)
T PRK06114 144 ASMSGIIVNRG---LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR---PEMVH-QTKLFEEQTPM 216 (254)
T ss_pred CchhhcCCCCC---CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc---ccchH-HHHHHHhcCCC
Confidence 33 22211110 1123567788877766543 47889999999876543211 10000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|+.++.++.+.. . -++.+.+.|
T Consensus 217 ~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dg 249 (254)
T PRK06114 217 QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDG 249 (254)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCceEEECc
Confidence 124568999999999887643 2 256777763
No 167
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0014 Score=49.60 Aligned_cols=128 Identities=19% Similarity=0.153 Sum_probs=72.3
Q ss_pred CCCCCHHHHHHhhcc--------CcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILKE--------VDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--------~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v- 48 (191)
+|+.|.+++.+++++ .|+|+|+++... ..+..+++++ ++..+ ..+++
T Consensus 55 ~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 133 (260)
T PRK08267 55 LDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVIN 133 (260)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEE
Confidence 588998888877653 599999998642 1223334444 44454 45655
Q ss_pred cCCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+. +... . .....|..+|..++.+.+. .+++++.++||++.......... . ...... ..
T Consensus 134 isS~~~~~~-~----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~-~~~~~~---~~ 201 (260)
T PRK08267 134 TSSASAIYG-Q----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN---E-VDAGST---KR 201 (260)
T ss_pred eCchhhCcC-C----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc---h-hhhhhH---hh
Confidence 3432 2211 1 1123466788877665543 47999999999876543221000 0 000000 00
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+..+|+|+++..++.++
T Consensus 202 ~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 202 LGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred ccCCCCHHHHHHHHHHHHhCC
Confidence 112356799999999999764
No 168
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0012 Score=49.85 Aligned_cols=147 Identities=7% Similarity=0.012 Sum_probs=80.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..+++++ +++.+ ..++|.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 143 (260)
T PRK07063 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNI 143 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEE
Confidence 48889888887765 5899999998531 1222333343 44455 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc-eEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD-DVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 121 (191)
|+....... .....|..+|..++.+.+. .|+....++||++.......+........ ...........
T Consensus 144 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T PRK07063 144 ASTHAFKII----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM 219 (260)
T ss_pred CChhhccCC----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC
Confidence 442211111 1234577889888877653 47888889999876543221110000000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|.+++.++.++. . -++.+.+.|
T Consensus 220 ~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg 252 (260)
T PRK07063 220 KRIGRPEEVAMTAVFLASDEAPFINATCITIDG 252 (260)
T ss_pred CCCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence 124578999999999887643 2 356677764
No 169
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0032 Score=48.74 Aligned_cols=123 Identities=10% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|++||+++... ..+ ...++..+++.+ ..++|
T Consensus 96 ~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv 174 (293)
T PRK05866 96 CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHII 174 (293)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEE
Confidence 58899998888776 6899999997531 011 233444555677 67776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+.+...... .....|..+|..++.+.+. .|+..+.++||.+........ . .. .
T Consensus 175 ~isS~~~~~~~~---p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-----~----~~--~--- 237 (293)
T PRK05866 175 NVATWGVLSEAS---PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-----K----AY--D--- 237 (293)
T ss_pred EECChhhcCCCC---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-----c----cc--c---
Confidence 3 5443211110 1134577889888766543 478899999996554321110 0 00 0
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....++.+++|+.++.++.+.
T Consensus 238 ~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 238 GLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCCCCHHHHHHHHHHHHhcC
Confidence 123468999999999999864
No 170
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0025 Score=48.31 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH-----cCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV-----AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~-----~g~vkr~v~ 49 (191)
+|++|.+++.++++ ++|+|||+++... ..+..++.+++.. .+ ..+++.
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~ 144 (263)
T PRK07814 66 ADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVIN 144 (263)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence 48889988877765 5799999987421 2334566666653 34 456663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 120 (191)
|+ .+.. . ..+...|..+|..++.+.+. .++..+.++||+........... ..... .+.+ ...
T Consensus 145 ~sS~~~~~-~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~-~~~ 215 (263)
T PRK07814 145 ISSTMGRL-A----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA---NDELRAPMEK-ATP 215 (263)
T ss_pred EccccccC-C----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC---CHHHHHHHHh-cCC
Confidence 43 2321 1 12344678899888877664 24667788898765432211100 00000 0000 001
Q ss_pred eeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
...+...+|+|++++.++.+. . ..++.+.+.+
T Consensus 216 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 249 (263)
T PRK07814 216 LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG 249 (263)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 122457899999999998764 2 3366677763
No 171
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.49 E-value=0.002 Score=47.95 Aligned_cols=140 Identities=12% Similarity=0.082 Sum_probs=79.8
Q ss_pred CCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEE-cC
Q 038413 2 ELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 2 D~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v-~s 50 (191)
|++|.+++.+++ ..+|++++.+|... +.+. ..++-.+.+.+ --++| .|
T Consensus 61 DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~ 139 (246)
T COG4221 61 DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLG 139 (246)
T ss_pred ccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEec
Confidence 889988855554 35899999998652 2233 33444444554 33555 34
Q ss_pred CcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 EFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|..-... .| ..-|..+|+.+..+... .++..|.+.||...+-.++..-. ++..-.... --...
T Consensus 140 SiAG~~~-----y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~---~g~~~~~~~-~y~~~ 210 (246)
T COG4221 140 SIAGRYP-----YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF---EGDDERADK-VYKGG 210 (246)
T ss_pred ccccccc-----CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC---CchhhhHHH-HhccC
Confidence 4321111 12 23466788887766432 57889999999865433222111 110000000 00123
Q ss_pred eecchhhHHHHHHHHhcCcccCC-ceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCN-RIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~ 151 (191)
.++..+|||+.+..+++.|++.+ ..+.+.
T Consensus 211 ~~l~p~dIA~~V~~~~~~P~~vnI~ei~i~ 240 (246)
T COG4221 211 TALTPEDIAEAVLFAATQPQHVNINEIEIM 240 (246)
T ss_pred CCCCHHHHHHHHHHHHhCCCccccceEEEe
Confidence 57889999999999999997654 334443
No 172
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.002 Score=49.81 Aligned_cols=143 Identities=9% Similarity=0.122 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc--CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA--GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~--g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.+. . -.++|. |
T Consensus 103 ~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g~iV~is 181 (290)
T PRK06701 103 GDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GSAIINTG 181 (290)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CCeEEEEe
Confidence 58889888877764 4799999988521 12345566665542 1 135553 3
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .....|..+|...+.+.+. .|+..+.++||++.....+... ................
T Consensus 182 S~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~----~~~~~~~~~~~~~~~~ 253 (290)
T PRK06701 182 SITGYEGN----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF----DEEKVSQFGSNTPMQR 253 (290)
T ss_pred cccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc----CHHHHHHHHhcCCcCC
Confidence 32211111 1123466788877766543 4788999999987664322110 0000000111112234
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+.+|+|+++..++.+.. -.+..+.+.+
T Consensus 254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idg 284 (290)
T PRK06701 254 PGQPEELAPAYVFLASPDSSYITGQMLHVNG 284 (290)
T ss_pred CcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 6789999999999988743 2357777764
No 173
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0014 Score=49.10 Aligned_cols=147 Identities=13% Similarity=0.076 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEcCC
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLPSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~s~ 51 (191)
+|+.|.+++.+++ .++|+|||+++... ..+..++++++.. .+ .+.++.++
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~i~~~S 137 (249)
T PRK06500 59 ADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP-ASIVLNGS 137 (249)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEec
Confidence 3777777655443 25799999998532 2335677777764 23 23344333
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-CCCCceEEEecCCcceee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 123 (191)
....... .....|..+|...+.+++. .|++.++++||.+........... ..........-......-
T Consensus 138 ~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (249)
T PRK06500 138 INAHIGM----PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR 213 (249)
T ss_pred hHhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC
Confidence 2211111 1234677889888877642 478999999998876532211100 000000000000000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+.+|+|+++..++.++. ..+..+.+.|
T Consensus 214 ~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 244 (249)
T PRK06500 214 FGTPEEIAKAVLYLASDESAFIVGSEIIVDG 244 (249)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 4578999999999887643 2255566653
No 174
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0027 Score=47.74 Aligned_cols=84 Identities=13% Similarity=-0.029 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|..+|..++.+++. .|+....+.||++............ .... ..........+.+.+|+|+++..++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~dva~~~~~l~ 232 (252)
T PRK12747 156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDP-MMKQ--YATTISAFNRLGEVEDIADTAAFLA 232 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCH-HHHH--HHHhcCcccCCCCHHHHHHHHHHHc
Confidence 4677899988877653 4788999999987665322111000 0000 0000001124678999999998887
Q ss_pred cCcc-c-CCceeEeec
Q 038413 139 NDPR-T-CNRIVIYRP 152 (191)
Q Consensus 139 ~~~~-~-~~~~~~i~~ 152 (191)
.... . -++.+.+.|
T Consensus 233 s~~~~~~~G~~i~vdg 248 (252)
T PRK12747 233 SPDSRWVTGQLIDVSG 248 (252)
T ss_pred CccccCcCCcEEEecC
Confidence 7532 2 256677763
No 175
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.46 E-value=0.0013 Score=49.33 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. ..|+|||+++... +.+. ..++..+++.+.-.+++.
T Consensus 56 ~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 135 (254)
T TIGR02415 56 LDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA 135 (254)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 58899998887764 4699999998632 1111 233444454441245553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe------c
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY------G 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~------~ 116 (191)
|+....... .....|..+|...+.+.+. .++..+.++||++...................+. .
T Consensus 136 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (254)
T TIGR02415 136 ASIAGHEGN----PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS 211 (254)
T ss_pred cchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH
Confidence 432211111 1234577788888766643 3688888999987554321111000000000000 0
Q ss_pred CCcceeeecchhhHHHHHHHHhcCccc--CCceeEee
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYR 151 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~ 151 (191)
.......+.+.+|+++++..++.++.. .++.+.+.
T Consensus 212 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d 248 (254)
T TIGR02415 212 SEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD 248 (254)
T ss_pred hhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence 000012367889999999999987542 25566665
No 176
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0019 Score=48.64 Aligned_cols=144 Identities=13% Similarity=0.142 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------c----ccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------F----LDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~----~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|++||+++... . ...+.++..+++.+ -.+++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~ 140 (254)
T PRK07478 62 GDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIF 140 (254)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEE
Confidence 48889888877765 5799999998531 0 11234456666665 556663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+..... .+...|..+|...+.+.+. .|+..+.++||+............ . ...........
T Consensus 141 ~sS~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~-~~~~~~~~~~~ 213 (254)
T PRK07478 141 TSTFVGHTAGF----PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--P-EALAFVAGLHA 213 (254)
T ss_pred EechHhhccCC----CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--H-HHHHHHHhcCC
Confidence 43 2321111 1234577888888766543 478888999998765422111000 0 00000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...+...+|+|+.++.++.++. . -++.+.+.+
T Consensus 214 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 247 (254)
T PRK07478 214 LKRMAQPEEIAQAALFLASDAASFVTGTALLVDG 247 (254)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCC
Confidence 1234678999999999887643 2 256667753
No 177
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.42 E-value=0.0013 Score=49.08 Aligned_cols=143 Identities=8% Similarity=0.053 Sum_probs=75.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccHHHHHHHHHH----c--CCccEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQLKIVHAIKV----A--GNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~~~li~aa~~----~--g~vkr~ 47 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++.. . +.-.+|
T Consensus 58 ~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 58 ADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 589999988887764 589999998531 0112222333222 1 101345
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+.+...... .....|..+|..++.+++. .+++++.+|||.++++.......... ..... ..
T Consensus 138 v~~sS~~~~~~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~---~~~~~--~~ 209 (247)
T PRK09730 138 VNVSSAASRLGAP---GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGR---VDRVK--SN 209 (247)
T ss_pred EEECchhhccCCC---CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHH---HHHHH--hc
Confidence 53 4432111111 1123477788877766542 48999999999988753221100000 00000 00
Q ss_pred cee-eecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 120 AKA-VFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 120 ~~~-~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.+. -..+.+|+|+++..++.++. ..++.+.+.
T Consensus 210 ~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK09730 210 IPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLA 244 (247)
T ss_pred CCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecC
Confidence 001 12368999999998887643 235566665
No 178
>PRK06398 aldose dehydrogenase; Validated
Probab=97.40 E-value=0.0035 Score=47.44 Aligned_cols=147 Identities=9% Similarity=0.067 Sum_probs=80.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+...+++ .+++.+ ..++|.
T Consensus 51 ~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 129 (258)
T PRK06398 51 VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINI 129 (258)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEe
Confidence 58899888877764 5799999988532 122233444 444455 556663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCC--CCCc----eEEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPF--EPHD----DVVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~--~~~~----~~~~~~~ 117 (191)
|+...... ..+...|..+|..++.+.+. .++....++||++............ .... ....++.
T Consensus 130 sS~~~~~~----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (258)
T PRK06398 130 ASVQSFAV----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE 205 (258)
T ss_pred CcchhccC----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh
Confidence 44221111 12234577788888777653 2377788999987654322211000 0000 0000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+...+|+|+++..++.++. . .++.+.+.+
T Consensus 206 ~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 206 MHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG 242 (258)
T ss_pred cCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 1111235678999999999887642 2 366677764
No 179
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0048 Score=46.16 Aligned_cols=121 Identities=15% Similarity=0.158 Sum_probs=72.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHH----HHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIV----HAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li----~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+..+++ +.+++.+ ..++|.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 138 (248)
T PRK08251 60 LDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLI 138 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 58889888776654 5899999997532 11222333 4445666 677664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... ..+...|..+|..++.+.+. .++.++.++||++........ . . ..
T Consensus 139 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----~----------~-~~ 199 (248)
T PRK08251 139 SSVSAVRGL---PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----K----------S-TP 199 (248)
T ss_pred eccccccCC---CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----c----------c-CC
Confidence 432211110 11234577888877766542 478889999998655321110 0 0 12
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++.+|.|+.++..++..
T Consensus 200 ~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 200 FMVDTETGVKALVKAIEKE 218 (248)
T ss_pred ccCCHHHHHHHHHHHHhcC
Confidence 3577899999999999764
No 180
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.36 E-value=0.0029 Score=47.39 Aligned_cols=145 Identities=9% Similarity=0.108 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+++|+++... ..+..++++++. +.+.-.++|.
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 138 (248)
T TIGR01832 59 ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINI 138 (248)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 48888888876653 4899999997532 122334555543 3321235553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .|+..+.++||++.................+ . ......
T Consensus 139 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~-~~~~~~ 211 (248)
T TIGR01832 139 ASMLSFQGG----IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAI--L-ERIPAG 211 (248)
T ss_pred ecHHhccCC----CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHH--H-hcCCCC
Confidence 332111110 1123567788888776653 3788999999987665322110000000000 0 000113
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.++..+|+|+++..++..+.. .++.+.+.|
T Consensus 212 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 212 RWGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 578899999999999976432 266666653
No 181
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.36 E-value=0.0053 Score=46.55 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+ ...++..+++.+ ..+++.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 144 (265)
T PRK07097 66 CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINI 144 (265)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899998888774 3799999998632 111 223555555565 566663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec---CCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG---NGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~---~g~ 119 (191)
|+....... .+...|..+|..++.+.+. .|+..+.++||++...................+.. ...
T Consensus 145 sS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T PRK07097 145 CSMMSELGR----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT 220 (265)
T ss_pred cCccccCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC
Confidence 432211111 1234577788887766553 48999999999887643221100000000000000 000
Q ss_pred ceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
....+...+|+|..+..++.++ .. .++.+.+.+
T Consensus 221 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 255 (265)
T PRK07097 221 PAARWGDPEDLAGPAVFLASDASNFVNGHILYVDG 255 (265)
T ss_pred CccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 0123556899999999999874 22 356667764
No 182
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.36 E-value=0.0073 Score=45.22 Aligned_cols=147 Identities=12% Similarity=0.080 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC-----------cccHHHHHHHHHHc--CCccEEEc-CC-cccCCCCC--
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ-----------FLDQLKIVHAIKVA--GNIKRFLP-SE-FGCEEDRV-- 59 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~-----------~~~~~~li~aa~~~--g~vkr~v~-s~-~g~~~~~~-- 59 (191)
+|+.|.+++.++++ +.|+|||+++... ..+...+++++... . -.++|. |+ .+......
T Consensus 30 ~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~ 108 (241)
T PRK12428 30 ADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLE 108 (241)
T ss_pred ccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchH
Confidence 58999999988876 5899999998632 34455566666543 1 135553 33 12110000
Q ss_pred --------------------CCCCCchhhHHHHHHHHHHHH--------hcCCCeEEEecccccccccccccCCCCCCce
Q 038413 60 --------------------RPLPPFEAYLEKKRIVRRAIE--------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDD 111 (191)
Q Consensus 60 --------------------~~~~~~~~~~~~k~~~e~~l~--------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~ 111 (191)
....+...|..+|..++.+.+ ..|+..+.++||............ ......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~-~~~~~~ 187 (241)
T PRK12428 109 LHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRS-MLGQER 187 (241)
T ss_pred HHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchh-hhhhHh
Confidence 011223467789988765532 247888999999876653222110 000000
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.. ........+...+|+|++++.++.++. -.++.+.+.
T Consensus 188 ~~--~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vd 227 (241)
T PRK12428 188 VD--SDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVD 227 (241)
T ss_pred hh--hcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEec
Confidence 00 000001124678999999999886542 225556665
No 183
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.34 E-value=0.0027 Score=47.86 Aligned_cols=143 Identities=9% Similarity=0.130 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHH----HcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIK----VAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~----~~g~vkr~v-~s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++. +.+ ..++| .|
T Consensus 67 ~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~is 145 (255)
T PRK06113 67 CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTIT 145 (255)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEe
Confidence 48889888877654 4699999998531 223455566554 344 34655 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|...+.+++. .++..+.+.||++..........+...... ........
T Consensus 146 S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~----~~~~~~~~ 217 (255)
T PRK06113 146 SMAAENKN----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM----LQHTPIRR 217 (255)
T ss_pred cccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHH----HhcCCCCC
Confidence 42211111 1234577889888877653 467888899998765432211110000000 00000122
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+...+|+++++..++.... . .++.+.+.|
T Consensus 218 ~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 218 LGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 5678999999999887643 2 367778874
No 184
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0036 Score=47.04 Aligned_cols=145 Identities=9% Similarity=0.099 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccH----HHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQ----LKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~----~~li~aa~~~g~vkr~v~ 49 (191)
+|++|.+++.++++. .|++||+++... ..+. ..++..+++.+ ..+++.
T Consensus 63 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~ 141 (253)
T PRK06172 63 CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVN 141 (253)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 588888888877653 599999998521 0111 23334444555 456553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+....... .....|..+|..++.+.+. .|+....++||++.......... ... .....+-.....
T Consensus 142 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~-~~~~~~~~~~~~ 215 (253)
T PRK06172 142 TASVAGLGAA----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-ADP-RKAEFAAAMHPV 215 (253)
T ss_pred ECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-cCh-HHHHHHhccCCC
Confidence 432211111 1234566788888776653 36888889999876543322110 000 000000000001
Q ss_pred eeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
.-+...+|+|+.+..++.+. . ..++.+.+.|
T Consensus 216 ~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 216 GRIGKVEEVASAVLYLCSDGASFTTGHALMVDG 248 (253)
T ss_pred CCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 12467899999999998864 3 2367777764
No 185
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0031 Score=48.05 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++. +.+...+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 136 (272)
T PRK07832 57 LDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV 136 (272)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 47888887776554 4799999998532 122344555542 3221345553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCC--CceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|..++.+.+ ..++.++.++||.+..+........... ......+. ...
T Consensus 137 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (272)
T PRK07832 137 SSAAGLVAL----PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-DRF 211 (272)
T ss_pred ccccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-Hhc
Confidence 432211111 112345667765554443 3589999999998876543321100000 00000000 011
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+..+|+|+.++.++..+
T Consensus 212 ~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 212 RGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred ccCCCCHHHHHHHHHHHHhcC
Confidence 123578999999999999754
No 186
>PRK08643 acetoin reductase; Validated
Probab=97.33 E-value=0.0047 Score=46.47 Aligned_cols=148 Identities=11% Similarity=0.161 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHH----HHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQL----KIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~----~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|++++.++++ +.|+|||+++... ..+.. .+++.+++.+.-.+++ .
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 58 ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999988877765 4799999997532 11122 2333333332012444 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CCCCCceEEEe--c--C
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PFEPHDDVVVY--G--N 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~~~~--~--~ 117 (191)
|+....... .....|..+|..++.+.+. .|+..+.++||++.......... ...+.+....+ . .
T Consensus 138 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
T PRK08643 138 TSQAGVVGN----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA 213 (256)
T ss_pred CccccccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh
Confidence 443211111 1234577888887765542 57889999999887653322110 00000000000 0 0
Q ss_pred Cc-ceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 GE-AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 g~-~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.. ....+...+|+|+++..++.+.. -.++.+.+.+
T Consensus 214 ~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdg 251 (256)
T PRK08643 214 KDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDG 251 (256)
T ss_pred ccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence 00 01135678999999988887642 2356666653
No 187
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.33 E-value=0.0047 Score=53.42 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---c----------------cc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---F----------------LD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---~----------------~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... . .+ ...++..+++.+.-.++|.
T Consensus 472 ~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~i 551 (676)
T TIGR02632 472 MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFI 551 (676)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58899998888775 6899999998642 0 01 1233455555441135553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-ccc-cc-ccCC-----CCCCce-EE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFV-NV-LLRP-----FEPHDD-VV 113 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~-~~-~~~~-----~~~~~~-~~ 113 (191)
|+....... .....|..+|...+.+++. .|+.+..++|+.... ..+ .. .... ...... ..
T Consensus 552 SS~~a~~~~----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 627 (676)
T TIGR02632 552 ASKNAVYAG----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE 627 (676)
T ss_pred eChhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHH
Confidence 432211111 1234677889888877653 378888899987652 111 00 0000 000000 00
Q ss_pred EecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 114 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+....+++.+|+|+++..++.+.. .-++.+.+.|
T Consensus 628 ~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 628 HYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred HHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 01112222346889999999998887542 2367788874
No 188
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0037 Score=46.92 Aligned_cols=142 Identities=12% Similarity=0.077 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHH----HHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQL----KIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~----~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+.. .+++.+++.+ ..+++.
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 142 (252)
T PRK07035 64 CHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVN 142 (252)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEE
Confidence 47888887776654 4799999997421 11223 3344445555 566653
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... . .+...|..+|..++.+++. .|+..+.+.||............ .............
T Consensus 143 ~sS~~~~~~-~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~ 214 (252)
T PRK07035 143 VASVNGVSP-G----DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK---NDAILKQALAHIP 214 (252)
T ss_pred ECchhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC---CHHHHHHHHccCC
Confidence 33 22211 1 1234577889888877653 47889999999876543222110 0000000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
...+...+|+|+.+..++.+.. . .++.+.+.
T Consensus 215 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d 247 (252)
T PRK07035 215 LRRHAEPSEMAGAVLYLASDASSYTTGECLNVD 247 (252)
T ss_pred CCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence 1124578999999999887653 2 35666665
No 189
>PRK09242 tropinone reductase; Provisional
Probab=97.32 E-value=0.004 Score=46.97 Aligned_cols=143 Identities=9% Similarity=0.034 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..+++.
T Consensus 67 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 145 (257)
T PRK09242 67 ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNI 145 (257)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888887766553 5799999998521 12334455544 4455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+++. .++..+.++||++........... . ......-......
T Consensus 146 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~-~~~~~~~~~~~~~ 218 (257)
T PRK09242 146 GSVSGLTHV----RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--P-DYYEQVIERTPMR 218 (257)
T ss_pred CccccCCCC----CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--h-HHHHHHHhcCCCC
Confidence 432211111 1234577788887776653 478899999998766432221100 0 0000000000001
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
-+...+|++.++..++.+.. . .++.+.+.
T Consensus 219 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 249 (257)
T PRK09242 219 RVGEPEEVAAAVAFLCMPAASYITGQCIAVD 249 (257)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence 23467999999988887542 2 35666775
No 190
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.29 E-value=0.0048 Score=46.16 Aligned_cols=143 Identities=8% Similarity=0.112 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHH-HHHcCCcc------E
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHA-IKVAGNIK------R 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~a-a~~~g~vk------r 46 (191)
+|+.|.+++.++++ ..|++||+++... ..+...++++ ++... .+ +
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~ 137 (248)
T PRK06947 59 GDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDRGGRGGA 137 (248)
T ss_pred eccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCCCcE
Confidence 47888887776653 5899999998531 1122344433 22221 11 3
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+........ .....|..+|..++.+.+. .++.+++++||++..........+... ...+..
T Consensus 138 ii~~sS~~~~~~~~---~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~----~~~~~~ 210 (248)
T PRK06947 138 IVNVSSIASRLGSP---NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRA----ARLGAQ 210 (248)
T ss_pred EEEECchhhcCCCC---CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHH----HHHhhc
Confidence 55 33321111100 1123577888887765542 479999999998776432211000000 000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
....-+...+|+|+.++.++.++. ..++.+.+.
T Consensus 211 ~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~ 245 (248)
T PRK06947 211 TPLGRAGEADEVAETIVWLLSDAASYVTGALLDVG 245 (248)
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence 000113578999999999988763 235666665
No 191
>PRK07985 oxidoreductase; Provisional
Probab=97.26 E-value=0.0044 Score=47.92 Aligned_cols=143 Identities=10% Similarity=0.090 Sum_probs=80.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc---CCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA---GNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~---g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+++|+++... +.+...+++++... + .++|.
T Consensus 107 ~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~i 184 (294)
T PRK07985 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITT 184 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEE
Confidence 48888888776653 4799999987421 12344566666532 2 25553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .|+....++||+....+...... ...............
T Consensus 185 SS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 257 (294)
T PRK07985 185 SSIQAYQPS----PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ---TQDKIPQFGQQTPMK 257 (294)
T ss_pred CCchhccCC----CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC---CHHHHHHHhccCCCC
Confidence 442211111 1123577889888766542 48999999999887653211000 000000011111111
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+...+|||+++..++.++. . -++.+.+.|
T Consensus 258 r~~~pedva~~~~fL~s~~~~~itG~~i~vdg 289 (294)
T PRK07985 258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_pred CCCCHHHHHHHHHhhhChhcCCccccEEeeCC
Confidence 35678999999999887643 2 367777764
No 192
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0071 Score=44.91 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=75.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------cccHHHHHHHHHH---cCCccEEE-cCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FLDQLKIVHAIKV---AGNIKRFL-PSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~~~~~li~aa~~---~g~vkr~v-~s~~ 52 (191)
+|+.|.+++.++++ ++|.++++++... ..+...+++++.+ .+ .++| .|+.
T Consensus 60 ~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~ 137 (238)
T PRK05786 60 GDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSM 137 (238)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecc
Confidence 58889888877654 3599999987432 1111222333222 12 2444 3433
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
+..... ..+...|..+|...+..++ ..+++++++||+++++...+... .. . .. .....++
T Consensus 138 ~~~~~~---~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~---~~--~--~~---~~~~~~~ 204 (238)
T PRK05786 138 SGIYKA---SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN---WK--K--LR---KLGDDMA 204 (238)
T ss_pred hhcccC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh---hh--h--hc---cccCCCC
Confidence 211111 1223457778877765543 25899999999988764321100 00 0 00 0112357
Q ss_pred chhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 126 YEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
..+|+++++..++.++. ..++.+.+.
T Consensus 205 ~~~~va~~~~~~~~~~~~~~~g~~~~~~ 232 (238)
T PRK05786 205 PPEDFAKVIIWLLTDEADWVDGVVIPVD 232 (238)
T ss_pred CHHHHHHHHHHHhcccccCccCCEEEEC
Confidence 78999999999997643 235666665
No 193
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0071 Score=45.93 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+++|+++... +...+.++..+++.+ ..++|. |
T Consensus 65 ~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~is 143 (263)
T PRK08339 65 ADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYST 143 (263)
T ss_pred ecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence 58899888887765 4799999987531 112456677777776 567663 4
Q ss_pred CcccCCCCCCCCCCc-hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC--CC---CC-CceEEEec
Q 038413 51 EFGCEEDRVRPLPPF-EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR--PF---EP-HDDVVVYG 116 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~-~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~--~~---~~-~~~~~~~~ 116 (191)
+...... .|. ..|..+|..++.+.+. .|+....+.||++.......... .. .. ........
T Consensus 144 S~~~~~~-----~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (263)
T PRK08339 144 SVAIKEP-----IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA 218 (263)
T ss_pred CccccCC-----CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh
Confidence 4321111 122 2355678777665542 57888999999876543221100 00 00 00000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
......-+...+|+|+++..++.++. . -++.+.+.| +...|
T Consensus 219 ~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg-G~~~~ 261 (263)
T PRK08339 219 KPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG-GRLNS 261 (263)
T ss_pred ccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECC-Ccccc
Confidence 00001125678999999998887643 2 256677764 44443
No 194
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0093 Score=44.55 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=72.5
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-CC-
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP-SE- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~-s~- 51 (191)
+|+.|.+++.++++ ..|+|+|+++... ..+..+++++ +++.+ ..+++. |+
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~ 136 (243)
T PRK07102 58 LDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSV 136 (243)
T ss_pred cCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecc
Confidence 48888888877665 3699999887531 1223334444 44456 667663 33
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+.. .. .....|..+|..++.+.+ ..|+.++.++||+......... . .+ ...+
T Consensus 137 ~~~~-~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----~-----~~-----~~~~ 196 (243)
T PRK07102 137 AGDR-GR----ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----K-----LP-----GPLT 196 (243)
T ss_pred cccC-CC----CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----C-----CC-----cccc
Confidence 2221 11 112356778877665543 3588999999998766421110 0 00 1235
Q ss_pred cchhhHHHHHHHHhcCc
Q 038413 125 NYEEDIAKCTIKVINDP 141 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~ 141 (191)
.+.+|+|+.++..+..+
T Consensus 197 ~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 197 AQPEEVAKDIFRAIEKG 213 (243)
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 67999999999998864
No 195
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0099 Score=46.89 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHH----HHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLK----IVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~----li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..+ ++..+++.+ -.++|.
T Consensus 63 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~i 141 (330)
T PRK06139 63 TDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINM 141 (330)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 48899988887763 5799999998532 112222 333445554 345553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh--------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
++.+..... .....|..+|..++.+.+. .++..+.+.||.+...+....... ... ....+
T Consensus 142 sS~~~~~~~----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~~------~~~~~ 209 (330)
T PRK06139 142 ISLGGFAAQ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--TGR------RLTPP 209 (330)
T ss_pred cChhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--ccc------cccCC
Confidence 332211110 1123577788876555432 268888899998766532211000 000 00112
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+.+.+|+|++++.++.+++
T Consensus 210 ~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 210 PPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred CCCCCHHHHHHHHHHHHhCCC
Confidence 346789999999999998764
No 196
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.22 E-value=0.009 Score=45.60 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------------------ccc----HHHHH
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------------------FLD----QLKIV 35 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------------------~~~----~~~li 35 (191)
+|+.|.+++.++++ .+|++||+++... +.+ .+.++
T Consensus 66 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 145 (278)
T PRK08277 66 ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFA 145 (278)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 58888888776654 5899999988321 001 12445
Q ss_pred HHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-
Q 038413 36 HAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF- 106 (191)
Q Consensus 36 ~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~- 106 (191)
..+++.+ -.++|. |+....... .+...|..+|..++.+++. .|+....++||++.......+....
T Consensus 146 ~~~~~~~-~g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~ 220 (278)
T PRK08277 146 KDMVGRK-GGNIINISSMNAFTPL----TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED 220 (278)
T ss_pred HHHHhcC-CcEEEEEccchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccc
Confidence 5565565 456653 432211111 1234577889888877653 3788899999988765322211000
Q ss_pred -CCCceEEEecCCcceeeecchhhHHHHHHHHhcC-cc-c-CCceeEeec
Q 038413 107 -EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND-PR-T-CNRIVIYRP 152 (191)
Q Consensus 107 -~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~-~~-~-~~~~~~i~~ 152 (191)
................-+...+|+|++++.++.+ .. . -++.+.+.|
T Consensus 221 ~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg 270 (278)
T PRK08277 221 GSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG 270 (278)
T ss_pred ccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence 0000000000011112356789999999998876 33 2 267777764
No 197
>PRK05717 oxidoreductase; Validated
Probab=97.21 E-value=0.0049 Score=46.41 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH---cCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV---AGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~---~g~vkr~v- 48 (191)
+|+.|.+++.++++ .+|++||+++... +.+..++++++.+ .. -.++|
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~ 141 (255)
T PRK05717 63 MDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVN 141 (255)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEE
Confidence 58889888766553 3699999998531 2245677777753 11 23444
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCC-cce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-EAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~ 121 (191)
.|+....... .....|..+|..++.+.+. .++....++||++.......... . ........ ...
T Consensus 142 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~--~~~~~~~~~~~~ 212 (255)
T PRK05717 142 LASTRARQSE----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA---E--PLSEADHAQHPA 212 (255)
T ss_pred EcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc---h--HHHHHHhhcCCC
Confidence 3442211111 1133577889888877653 24677889999877643211100 0 00000000 001
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+.+.+|+|.++..++.+.. ..++.+.+.+
T Consensus 213 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 245 (255)
T PRK05717 213 GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG 245 (255)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 235688999999988886542 2356666653
No 198
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0073 Score=45.73 Aligned_cols=145 Identities=10% Similarity=0.035 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHHH---cCCccEEE-cCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIKV---AGNIKRFL-PSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~~---~g~vkr~v-~s~ 51 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++.. .+ -.++| .|+
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS 137 (261)
T PRK08265 59 TDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTS 137 (261)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence 58899988877765 4699999988531 1122233333322 22 23554 333
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-ee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AV 123 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 123 (191)
....... .....|..+|..++.+.+. .|+.++.++||++........... .............+ .-
T Consensus 138 ~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~--~~~~~~~~~~~~~p~~r 211 (261)
T PRK08265 138 ISAKFAQ----TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG--DRAKADRVAAPFHLLGR 211 (261)
T ss_pred hhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc--chhHHHHhhcccCCCCC
Confidence 2211111 1133567788887766553 478899999998765432221100 00000000000001 12
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+...+|+|+++..++.++. . -++.+.+.|
T Consensus 212 ~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg 242 (261)
T PRK08265 212 VGDPEEVAQVVAFLCSDAASFVTGADYAVDG 242 (261)
T ss_pred ccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 4578999999999987643 2 366777764
No 199
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.014 Score=44.04 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=78.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.. .+ ..+++.
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 152 (256)
T PRK12748 74 IDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINL 152 (256)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEE
Confidence 48888888776664 4699999997531 1234555655543 23 346653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ......|..+|...+.+++. .++..+.++||.+...+..... ........ . ..
T Consensus 153 ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~----~~~~~~~~-~---~~ 220 (256)
T PRK12748 153 TSGQSLGP----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEEL----KHHLVPKF-P---QG 220 (256)
T ss_pred CCccccCC----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhH----HHhhhccC-C---CC
Confidence 33211110 01234577889888877553 4788999999986653221100 00000000 0 01
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+|+.+..++.... ..++.+++.+
T Consensus 221 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 252 (256)
T PRK12748 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEG 252 (256)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence 23457999999887776532 2367777763
No 200
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0065 Score=45.79 Aligned_cols=146 Identities=8% Similarity=0.075 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|++||+++... ..+..++++++. +.+.-.+++.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 142 (260)
T PRK06198 63 ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNI 142 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 48888888877764 4799999998532 123345555553 3320234553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec---CCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG---NGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~---~g~ 119 (191)
|+....... .....|..+|..++.+.+. .++..+.++||++.......... ........+.. ...
T Consensus 143 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~ 217 (260)
T PRK06198 143 GSMSAHGGQ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQR-EFHGAPDDWLEKAAATQ 217 (260)
T ss_pred CCcccccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhh-hccCCChHHHHHHhccC
Confidence 432211111 1234577888888777653 36788889999877643211000 00000000000 011
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
....+++.+|+|+++..++.++. ..++.+.+.
T Consensus 218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 251 (260)
T PRK06198 218 PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFD 251 (260)
T ss_pred CccCCcCHHHHHHHHHHHcChhhCCccCceEeEC
Confidence 11345789999999999887653 236777776
No 201
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.023 Score=41.10 Aligned_cols=129 Identities=13% Similarity=0.096 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEEc-CC-ccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFLP-SE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v~-s~-~g~ 54 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++... + -.+++. |+ .+.
T Consensus 38 ~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~ 116 (199)
T PRK07578 38 VDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSD 116 (199)
T ss_pred ecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccC
Confidence 48899999888876 6899999998532 12234566665432 1 124443 33 222
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchh
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
.. . .....|..+|..++.+.+. .|+....++||++..... .. . . .++ + ..++..+
T Consensus 117 ~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-~~-----~--~-~~~--~---~~~~~~~ 177 (199)
T PRK07578 117 EP-I----PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-KY-----G--P-FFP--G---FEPVPAA 177 (199)
T ss_pred CC-C----CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-hh-----h--h-cCC--C---CCCCCHH
Confidence 11 0 1233567788877766542 477888899997654321 00 0 0 011 1 2357899
Q ss_pred hHHHHHHHHhcCcccCCceeEe
Q 038413 129 DIAKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i 150 (191)
|+|+.+..++... ..|+.+.+
T Consensus 178 ~~a~~~~~~~~~~-~~g~~~~~ 198 (199)
T PRK07578 178 RVALAYVRSVEGA-QTGEVYKV 198 (199)
T ss_pred HHHHHHHHHhccc-eeeEEecc
Confidence 9999999998764 23455544
No 202
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.007 Score=45.54 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=78.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ .+|++||+++... +.+...+++++ ++.+.-.+++ .
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 144 (253)
T PRK05867 65 CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINT 144 (253)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 58889888877764 6899999998532 12233444443 3332012344 2
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+...... .....|..+|..++.+.+. .|+....++||++.......... .... +......
T Consensus 145 sS~~~~~~~~~---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~--~~~~----~~~~~~~ 215 (253)
T PRK05867 145 ASMSGHIINVP---QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE--YQPL----WEPKIPL 215 (253)
T ss_pred CcHHhcCCCCC---CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH--HHHH----HHhcCCC
Confidence 33 22211100 1123577889888877653 47888999999876543221100 0000 0000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|||+++..++.+.. . -++.+.+.|
T Consensus 216 ~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 248 (253)
T PRK05867 216 GRLGRPEELAGLYLYLASEASSYMTGSDIVIDG 248 (253)
T ss_pred CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence 135678999999999887643 2 367777764
No 203
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.015 Score=43.83 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccH----HHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQ----LKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~----~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|+|||+++... ..+. ..++..+++.+ ..+++
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv 136 (255)
T PRK06057 58 TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSII 136 (255)
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEE
Confidence 48888888887775 4699999987531 0111 23444455555 44555
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCC--CceEEEecC
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVVVYGN 117 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~~~~~ 117 (191)
.|+ .+..... .+...|..+|...+.+.+ ..|+..+.++||++.............+ ...+...+.
T Consensus 137 ~~sS~~~~~g~~----~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T PRK06057 137 NTASFVAVMGSA----TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM 212 (255)
T ss_pred EEcchhhccCCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC
Confidence 343 2221100 122346677865554433 2489999999998876543221110000 000000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
..+.+.+|+|+++..++.+.. . .++.+.+.
T Consensus 213 ----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 213 ----GRFAEPEEIAAAVAFLASDDASFITASTFLVD 244 (255)
T ss_pred ----CCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 146789999999888777643 2 25666665
No 204
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.018 Score=42.97 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHhhcc----CcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCCccc
Q 038413 1 GELDEHEKIVSILKE----VDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g----~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~~g~ 54 (191)
+|++|.+++.++++. .|.++++++... ..+..++++++... + -.+++ .|+...
T Consensus 53 ~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~ 131 (240)
T PRK06101 53 FDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIAS 131 (240)
T ss_pred eeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhh
Confidence 589999999988865 478888776321 12356677776642 2 23444 343221
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
.... .....|..+|..++.+.+ ..|+.++.++||+..+...... . ... ...+..
T Consensus 132 ~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~--------~------~~~-~~~~~~ 192 (240)
T PRK06101 132 ELAL----PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN--------T------FAM-PMIITV 192 (240)
T ss_pred ccCC----CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC--------C------CCC-CcccCH
Confidence 1111 123357788988887754 3589999999998765421110 0 000 123689
Q ss_pred hhHHHHHHHHhcCc
Q 038413 128 EDIAKCTIKVINDP 141 (191)
Q Consensus 128 ~Dva~~~~~~l~~~ 141 (191)
+|+|+.++..++..
T Consensus 193 ~~~a~~i~~~i~~~ 206 (240)
T PRK06101 193 EQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999874
No 205
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.02 E-value=0.0053 Score=45.93 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=49.5
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
...|..+|..++.+++. .+++.+.++||.+........ .+. .............+.+.+|+|+++..+
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~a~~~~~l 234 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM-KPE----ALERLEKMIPVGRLGEPEEIAHTVRFI 234 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc-CHH----HHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 34577888888766542 479999999998765432111 000 000000111112356889999999998
Q ss_pred hcCcccCCceeEeec
Q 038413 138 INDPRTCNRIVIYRP 152 (191)
Q Consensus 138 l~~~~~~~~~~~i~~ 152 (191)
+......++.++++|
T Consensus 235 ~~~~~~~g~~~~~~g 249 (253)
T PRK08217 235 IENDYVTGRVLEIDG 249 (253)
T ss_pred HcCCCcCCcEEEeCC
Confidence 876433467888874
No 206
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0088 Score=45.19 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++. +.+ ..+++.
T Consensus 61 ~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 139 (263)
T PRK08226 61 ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMM 139 (263)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899888887765 4699999998532 122344445443 444 456663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc---CCCCCCceEEEecCC
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL---RPFEPHDDVVVYGNG 118 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~---~~~~~~~~~~~~~~g 118 (191)
|+ .+..... .....|..+|...+.+.+. .++..+.++||........... .+............+
T Consensus 140 sS~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (263)
T PRK08226 140 SSVTGDMVAD----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA 215 (263)
T ss_pred CcHHhcccCC----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc
Confidence 33 2211110 1133567788887766653 3788889999987664322211 000000000000001
Q ss_pred cceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.....+...+|+|+++..++... .. .++.+.+.|
T Consensus 216 ~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dg 251 (263)
T PRK08226 216 IPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDG 251 (263)
T ss_pred CCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECC
Confidence 00113467899999888887653 22 356667764
No 207
>PRK12742 oxidoreductase; Provisional
Probab=96.97 E-value=0.013 Score=43.48 Aligned_cols=140 Identities=9% Similarity=0.049 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCC-ccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~-~g~ 54 (191)
+|+.|.+++.++++ ..|++||+++... ..+...++.++.+. . ..++| .|+ .+.
T Consensus 58 ~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~ 136 (237)
T PRK12742 58 TDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-GGRIIIIGSVNGD 136 (237)
T ss_pred cCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-CCeEEEEeccccc
Confidence 47888888877764 4799999998632 01122333333322 2 23555 333 221
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
... ..+...|..+|..++.+++. .|+..+.++||++.....+... . .. .. .........+.+.
T Consensus 137 ~~~----~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~-~~-~~---~~~~~~~~~~~~p 206 (237)
T PRK12742 137 RMP----VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-P-MK-DM---MHSFMAIKRHGRP 206 (237)
T ss_pred cCC----CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-H-HH-HH---HHhcCCCCCCCCH
Confidence 111 12344677889888877653 4789999999987654322100 0 00 00 0000001124678
Q ss_pred hhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 128 EDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
+|+|+++..++.+.. . .+..+.+.
T Consensus 207 ~~~a~~~~~l~s~~~~~~~G~~~~~d 232 (237)
T PRK12742 207 EEVAGMVAWLAGPEASFVTGAMHTID 232 (237)
T ss_pred HHHHHHHHHHcCcccCcccCCEEEeC
Confidence 999999988887643 2 25556665
No 208
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.012 Score=50.52 Aligned_cols=121 Identities=15% Similarity=0.267 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|++||+++... ..+ ...++..+++.+ ..++|
T Consensus 427 ~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv 505 (657)
T PRK07201 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVV 505 (657)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEE
Confidence 58899998888775 5899999998531 011 233445556666 66776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+.+..... .....|..+|..++.+.+. .|+.++.++||++........ .. . .
T Consensus 506 ~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-------~~---~----~ 567 (657)
T PRK07201 506 NVSSIGVQTNA----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-------KR---Y----N 567 (657)
T ss_pred EECChhhcCCC----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-------cc---c----c
Confidence 3 443221111 1134577889888777643 489999999998765421110 00 0 1
Q ss_pred eeeecchhhHHHHHHHHhcC
Q 038413 121 KAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~ 140 (191)
.....+.+++|+.++..+..
T Consensus 568 ~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 568 NVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 12357899999999998764
No 209
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.016 Score=44.00 Aligned_cols=144 Identities=11% Similarity=0.013 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc---CCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA---GNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~---g~vkr~v-~s 50 (191)
+|++|.+++.++++ ++|+|||+++... ..+..++++++... . -.+++ .|
T Consensus 65 ~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~is 143 (264)
T PRK07576 65 ADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQIS 143 (264)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEEC
Confidence 48889888887765 3699999986421 23345566655432 1 13554 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-cccccccCCCCCCceEEEecCCccee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+....... .....|..+|..++.+++. .++..+.++||.+.+ ........ ...............
T Consensus 144 s~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~---~~~~~~~~~~~~~~~ 216 (264)
T PRK07576 144 APQAFVPM----PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP---SPELQAAVAQSVPLK 216 (264)
T ss_pred ChhhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc---CHHHHHHHHhcCCCC
Confidence 32111110 1133566789888877653 467888899997653 21111110 000000000001112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+|++++.++.++. ..++.+.+.|
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~g 248 (264)
T PRK07576 217 RNGTKQDIANAALFLASDMASYITGVVLPVDG 248 (264)
T ss_pred CCCCHHHHHHHHHHHcChhhcCccCCEEEECC
Confidence 35678999999999998643 2366677764
No 210
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.013 Score=43.37 Aligned_cols=143 Identities=11% Similarity=0.043 Sum_probs=75.3
Q ss_pred CCCCCH-HHHHHhhccCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEEc-CC-cc
Q 038413 1 GELDEH-EKIVSILKEVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFLP-SE-FG 53 (191)
Q Consensus 1 gD~~d~-~~l~~a~~g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v~-s~-~g 53 (191)
+|+.|. +.+.+.+..+|++||+++... ..+..++++++. +.+ -.+++. |+ .+
T Consensus 52 ~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~ 130 (235)
T PRK06550 52 LDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIAS 130 (235)
T ss_pred CChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhh
Confidence 366665 444444557899999998421 122344455443 344 346653 33 22
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
.. .. .....|..+|..++.+.+. .|+..+.++||++.......... ................+..
T Consensus 131 ~~-~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (235)
T PRK06550 131 FV-AG----GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE---PGGLADWVARETPIKRWAE 202 (235)
T ss_pred cc-CC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC---chHHHHHHhccCCcCCCCC
Confidence 21 11 1123466788777665542 48899999999876543211000 0000000000111123567
Q ss_pred hhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 127 EEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+|+|+++..++.++. ..++.+.+.+
T Consensus 203 ~~~~a~~~~~l~s~~~~~~~g~~~~~~g 230 (235)
T PRK06550 203 PEEVAELTLFLASGKADYMQGTIVPIDG 230 (235)
T ss_pred HHHHHHHHHHHcChhhccCCCcEEEECC
Confidence 8999999999987642 2356666663
No 211
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.031 Score=42.69 Aligned_cols=134 Identities=15% Similarity=0.151 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++.. .+ -.+++ .
T Consensus 69 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~i 147 (273)
T PRK08278 69 GDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTL 147 (273)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58889988887765 5799999998631 2334556666643 32 22444 2
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-cccccccCCCCCCceEEEecCCcc
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+. +... . ...+...|..+|..++.+++. .++..+.+.|+.+.. ....... +....
T Consensus 148 ss~~~~~~-~--~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~------------~~~~~ 212 (273)
T PRK08278 148 SPPLNLDP-K--WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL------------GGDEA 212 (273)
T ss_pred CCchhccc-c--ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc------------ccccc
Confidence 332 2111 0 002234677899999887763 478888899984332 2111110 00111
Q ss_pred eeeecchhhHHHHHHHHhcCcc-cCCceeEe
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-TCNRIVIY 150 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i 150 (191)
...+...+|+|+.++.++..+. ..+..+.+
T Consensus 213 ~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~ 243 (273)
T PRK08278 213 MRRSRTPEIMADAAYEILSRPAREFTGNFLI 243 (273)
T ss_pred ccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence 1235678999999999988753 33443444
No 212
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.89 E-value=0.0084 Score=45.34 Aligned_cols=144 Identities=13% Similarity=0.049 Sum_probs=78.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC---------C-----cc---------------cHHHHHHHHHHcCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP---------Q-----FL---------------DQLKIVHAIKVAGNI 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~---------~-----~~---------------~~~~li~aa~~~g~v 44 (191)
+|++|.+++.++++ ..|+++|+++.. . .+ ..+.++..+++.+ -
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 144 (260)
T PRK08416 66 LNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-G 144 (260)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-C
Confidence 48889888877664 479999998631 1 00 1233444455544 4
Q ss_pred cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 45 KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 45 kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
.++|. |+.+..... .....|..+|..++.+.+. .|+....++||++.......+... .. ......
T Consensus 145 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~--~~-~~~~~~ 217 (260)
T PRK08416 145 GSIISLSSTGNLVYI----ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY--EE-VKAKTE 217 (260)
T ss_pred EEEEEEeccccccCC----CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC--HH-HHHHHH
Confidence 46653 442211110 1123467788888777653 478889999998765432211100 00 000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
......-+...+|+|.+++.++.++ .. -++.+.+.+
T Consensus 218 ~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg 255 (260)
T PRK08416 218 ELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG 255 (260)
T ss_pred hcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence 0000012567899999999988764 22 356666653
No 213
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.88 E-value=0.015 Score=44.02 Aligned_cols=144 Identities=12% Similarity=0.102 Sum_probs=77.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCc-cEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNI-KRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~v-kr~v- 48 (191)
+|+.|.+++.++++ ..|++||+++... +. ....++..+++.+ . .++|
T Consensus 64 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~ 142 (261)
T PRK08936 64 GDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIIN 142 (261)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 48888888777664 4799999998632 00 1233455666654 3 3555
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+...... ..+...|..+|.+.+.+.+. .|+..+.++||+........... ..............
T Consensus 143 ~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~ 215 (261)
T PRK08936 143 MSSVHEQIP----WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA---DPKQRADVESMIPM 215 (261)
T ss_pred EccccccCC----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC---CHHHHHHHHhcCCC
Confidence 343221111 11233567788766655442 47889999999876543211000 00000000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|+.+..++.++. . .+..+.+.+
T Consensus 216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~ 248 (261)
T PRK08936 216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADG 248 (261)
T ss_pred CCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 235678999999999887642 2 345566653
No 214
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.87 E-value=0.026 Score=42.47 Aligned_cols=144 Identities=11% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+++|+++... +.+...+ +..+++.+.-.++|.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~i 141 (251)
T PRK12481 62 ADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINI 141 (251)
T ss_pred eCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 48899988887764 4799999998532 1122333 334444330135552
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .....|..+|..++.+.+ ..|+....++||++...............+. +. .....
T Consensus 142 sS~~~~~~-~----~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~--~~-~~~p~ 213 (251)
T PRK12481 142 ASMLSFQG-G----IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEA--IL-ERIPA 213 (251)
T ss_pred CChhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHH--HH-hcCCC
Confidence 33 22211 1 112357788888877654 2588899999998765432211000000000 00 00000
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+...+|+|+++..++.+.. -.++.+.+.|
T Consensus 214 ~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdg 246 (251)
T PRK12481 214 SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG 246 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence 124678999999999887642 2356777763
No 215
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.027 Score=42.92 Aligned_cols=136 Identities=12% Similarity=0.126 Sum_probs=72.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.. .+ ..+++. |
T Consensus 51 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~is 129 (274)
T PRK05693 51 LDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIG 129 (274)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEEC
Confidence 48888888877653 5799999998532 1123344444421 22 235543 3
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCC--CCCCceEEEecCCc-
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRP--FEPHDDVVVYGNGE- 119 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~--~~~~~~~~~~~~g~- 119 (191)
+ .+.... .....|..+|..++.+.+ ..|+..+.++||.+...+....... ........++...+
T Consensus 130 S~~~~~~~-----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (274)
T PRK05693 130 SVSGVLVT-----PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREH 204 (274)
T ss_pred CccccCCC-----CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHH
Confidence 3 332110 123457778887776543 2589999999998866543221110 00000001100000
Q ss_pred -------ceeeecchhhHHHHHHHHhcCcc
Q 038413 120 -------AKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 120 -------~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
........+|+|+.++.++..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 205 IQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 00123578999999999988654
No 216
>PRK08589 short chain dehydrogenase; Validated
Probab=96.79 E-value=0.025 Score=43.07 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----c----------------cc----HHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----F----------------LD----QLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----~----------------~~----~~~li~aa~~~g~vkr~v- 48 (191)
+|+.|.+++.++++ ..|++||+++... . .+ .+.++..+++.+ .++|
T Consensus 61 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~ 138 (272)
T PRK08589 61 VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIIN 138 (272)
T ss_pred eecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEE
Confidence 48888888776664 4799999998531 0 01 123445555554 3554
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC--CceEE-EecCC
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVV-VYGNG 118 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~-~~~~g 118 (191)
.|+....... .....|..+|..++.+.+. .|+..+.+.||.+.............. ...+. .....
T Consensus 139 isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (272)
T PRK08589 139 TSSFSGQAAD----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM 214 (272)
T ss_pred eCchhhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc
Confidence 3442211111 1133577888888777653 478889999998765432211100000 00000 00000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.....+...+|+|+++..++.++. . .++.+.+.+
T Consensus 215 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg 250 (272)
T PRK08589 215 TPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDG 250 (272)
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence 000124678999999999887642 2 366777764
No 217
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.72 E-value=0.013 Score=40.85 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.+.+.+.+++.. .|.++|+++... +.+..++++++++.+ .++++. |+.+
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~ 138 (180)
T smart00822 60 CDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVA 138 (180)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHH
Confidence 478888877776543 599999997431 234677888888777 777664 4332
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEeccccc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYG 95 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~ 95 (191)
..... .....|..+|..++.+++ ..+++.+.+.||++.
T Consensus 139 ~~~~~----~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 139 GVLGN----PGQANYAAANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HhcCC----CCchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 21111 112346667877776654 358888888888653
No 218
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.032 Score=42.65 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC------------cccHHHHHHHHH----HcCCccEEEcCCcccCCCC
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ------------FLDQLKIVHAIK----VAGNIKRFLPSEFGCEEDR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~------------~~~~~~li~aa~----~~g~vkr~v~s~~g~~~~~ 58 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++. +.| ..-++.|..+.....
T Consensus 56 ~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~ 134 (275)
T PRK06940 56 VDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPA 134 (275)
T ss_pred eecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcc
Confidence 48899888887764 4899999998642 233344455443 334 223334433321110
Q ss_pred --------------CC---C----C----CCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC
Q 038413 59 --------------VR---P----L----PPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF 106 (191)
Q Consensus 59 --------------~~---~----~----~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~ 106 (191)
.. . . .+...|..+|...+...+. .|+....+.||+........... .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~-~ 213 (275)
T PRK06940 135 LTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELN-G 213 (275)
T ss_pred cchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhc-C
Confidence 00 0 0 1123467788887655432 57888999999876543211110 0
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
................-+...+|+|+++..++.+. .. -++.+.+.|
T Consensus 214 ~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg 261 (275)
T PRK06940 214 PRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG 261 (275)
T ss_pred CchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence 00000000000000112567899999999888753 32 356677764
No 219
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.04 Score=41.39 Aligned_cols=143 Identities=10% Similarity=0.089 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCC-------
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGN------- 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~------- 43 (191)
+|+.+.+++.++++ ..|++||+++... +.+..++++++. +...
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (258)
T PRK06949 65 LDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKP 144 (258)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCC
Confidence 47888888877765 4799999998421 122334444333 2220
Q ss_pred ccEEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
..+++ .|+.+.... ..+..+|..+|...+.+++. .++.+++++||.+.......... ....-.+.
T Consensus 145 ~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~ 217 (258)
T PRK06949 145 GGRIINIASVAGLRV----LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE---TEQGQKLV 217 (258)
T ss_pred CeEEEEECcccccCC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC---hHHHHHHH
Confidence 12444 233221111 11234566788777766543 47899999999887643221100 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.. .....+...+|+++++..++.++. . .++.+.+.
T Consensus 218 ~~-~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 218 SM-LPRKRVGKPEDLDGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred hc-CCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence 00 001234567999999999887542 2 35555665
No 220
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.046 Score=41.34 Aligned_cols=125 Identities=14% Similarity=0.257 Sum_probs=70.5
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ..|+|||+++... ..+..++++++. +.+ ..+++. |
T Consensus 60 ~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~is 138 (263)
T PRK09072 60 ADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVG 138 (263)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEec
Confidence 48888888776654 4799999988632 123344445443 343 345543 3
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+ .+.. .. .....|..+|..++.+++. .++.++.+.||++......... . . . ......
T Consensus 139 S~~~~~-~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-----~-~--~--~~~~~~ 203 (263)
T PRK09072 139 STFGSI-GY----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-----Q-A--L--NRALGN 203 (263)
T ss_pred ChhhCc-CC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-----c-c--c--cccccC
Confidence 3 2221 11 1123466788877665542 4688888999876543211100 0 0 0 000012
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+.+.+|+|+.++.++.+.
T Consensus 204 ~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 204 AMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 3567899999999999875
No 221
>PRK05855 short chain dehydrogenase; Validated
Probab=96.61 E-value=0.029 Score=47.22 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=73.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ ..|++||+++... +.+..++.++ +++.+ - .++|.
T Consensus 371 ~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~ 449 (582)
T PRK05855 371 VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVN 449 (582)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 58999998887765 3799999998632 1222333333 44443 2 35553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC---ceEEEecCC
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH---DDVVVYGNG 118 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~---~~~~~~~~g 118 (191)
||....... .+...|..+|..++.+.+. .|+..+.++||.+............... ......-..
T Consensus 450 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (582)
T PRK05855 450 VASAAAYAPS----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADK 525 (582)
T ss_pred ECChhhccCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhh
Confidence 442211111 1234677889887766542 5899999999987664322211000000 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
.........+|+|+.++.++..+.
T Consensus 526 ~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 526 LYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred hccccCCCHHHHHHHHHHHHHcCC
Confidence 000112467999999999998753
No 222
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.56 E-value=0.18 Score=39.21 Aligned_cols=156 Identities=9% Similarity=0.052 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----c----C-C-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----A----G-N-IK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~----g-~-vk 45 (191)
+|+.|.+++.++++ .+|++||+++... +.+..++++++.. . + . -.
T Consensus 69 ~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g 148 (306)
T PRK07792 69 GDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYG 148 (306)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCc
Confidence 58888888877664 4799999998632 1234455555431 1 0 0 02
Q ss_pred EEEc-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 46 RFLP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 46 r~v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
++|. |+ .+... . .....|..+|..++.+.+. .|+....+.|+. ......... .. .....
T Consensus 149 ~iv~isS~~~~~~-~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~----~~-~~~~~- 216 (306)
T PRK07792 149 RIVNTSSEAGLVG-P----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVF----GD-APDVE- 216 (306)
T ss_pred EEEEECCcccccC-C----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhc----cc-cchhh-
Confidence 5542 33 22211 0 1123577888888766542 478888888873 211111100 00 00000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecC-----------------CCccCHHHHHHHHHHHh
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQ-----------------TNIISQLELISLWEQKT 170 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~-----------------~~~~t~~e~~~~~~~~~ 170 (191)
.....+...+|+|.++..++.... .-++.+.+.|+ ++..|..|+.+.+.+.+
T Consensus 217 --~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T PRK07792 217 --AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF 287 (306)
T ss_pred --hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence 011334578999999888776532 22455555421 14578888888888874
No 223
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.52 E-value=0.043 Score=41.31 Aligned_cols=143 Identities=9% Similarity=0.111 Sum_probs=77.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..++++++ ++.+.-.+++ .
T Consensus 64 ~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~i 143 (253)
T PRK08993 64 ADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINI 143 (253)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 48889888887765 4799999998632 12233444443 3332012444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .....|..+|..++.+.+. .|+....++||++.......+......... +...-. .
T Consensus 144 sS~~~~~~-~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~--~~~~~p-~ 215 (253)
T PRK08993 144 ASMLSFQG-G----IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAE--ILDRIP-A 215 (253)
T ss_pred CchhhccC-C----CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHH--HHhcCC-C
Confidence 33 22211 0 1123566788887766542 478889999998876432211100000000 000000 0
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.-+...+|+|+.+..++.+.. . .++.+.+.
T Consensus 216 ~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d 247 (253)
T PRK08993 216 GRWGLPSDLMGPVVFLASSASDYINGYTIAVD 247 (253)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 125568999999999988653 2 35666665
No 224
>PRK06484 short chain dehydrogenase; Validated
Probab=96.52 E-value=0.031 Score=46.68 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc--CCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA--GNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~--g~vkr~v-~s 50 (191)
+|+.|.+++.++++ ..|++||+++... +.+..++++++... + -.++| .|
T Consensus 322 ~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~iv~is 400 (520)
T PRK06484 322 ADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-GGVIVNLG 400 (520)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-CCEEEEEC
Confidence 58899888877764 3799999998531 12334445554432 1 13555 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|..++.+.+. .|+....++||++........... ................
T Consensus 401 S~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~ 474 (520)
T PRK06484 401 SIASLLAL----PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS--GRADFDSIRRRIPLGR 474 (520)
T ss_pred chhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc--cHHHHHHHHhcCCCCC
Confidence 42211111 1234577889888766553 478899999998766432211100 0000000000000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+...+|+|++++.++..+. --++.+.+.+
T Consensus 475 ~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg 505 (520)
T PRK06484 475 LGDPEEVAEAIAFLASPAASYVNGATLTVDG 505 (520)
T ss_pred CcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 4678999999999887542 2367777764
No 225
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.47 E-value=0.045 Score=44.96 Aligned_cols=140 Identities=15% Similarity=0.135 Sum_probs=77.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCc----cEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNI----KRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~v----kr~v-~ 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+..++.+++.... . .++| .
T Consensus 263 ~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~-~~~~~g~iv~~ 341 (450)
T PRK08261 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAG-ALGDGGRIVGV 341 (450)
T ss_pred EeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhh-hhcCCCEEEEE
Confidence 37888888776654 5799999998532 234566667766533 2 4555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC-CCCCCceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR-PFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~ 120 (191)
|+ .+.... .....|..+|..++.+++ ..|+....+.||.+.......... .......+. .
T Consensus 342 SS~~~~~g~-----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~------~ 410 (450)
T PRK08261 342 SSISGIAGN-----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMN------S 410 (450)
T ss_pred CChhhcCCC-----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcC------C
Confidence 43 222111 113356778876665543 357888999999765422111100 000000000 0
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.......+|+|+++..++.... . -++.+.++|
T Consensus 411 l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g 444 (450)
T PRK08261 411 LQQGGLPVDVAETIAWLASPASGGVTGNVVRVCG 444 (450)
T ss_pred cCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence 0112346799999998876532 2 267777774
No 226
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.091 Score=39.59 Aligned_cols=147 Identities=10% Similarity=-0.007 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ ..|++||+++... +.+ .+.++..+++.+ -.+++. |+..
T Consensus 64 ~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~ 142 (259)
T PRK06125 64 LDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAA 142 (259)
T ss_pred ecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcc
Confidence 48889888887764 5899999988531 111 233444445554 335553 3321
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC----CCCCCc-eEEEecCCcce
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR----PFEPHD-DVVVYGNGEAK 121 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~----~~~~~~-~~~~~~~g~~~ 121 (191)
..... .....|..+|..++.+.+. .|+.+..+.||++.......... ...... .....-.....
T Consensus 143 ~~~~~----~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (259)
T PRK06125 143 GENPD----ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL 218 (259)
T ss_pred ccCCC----CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc
Confidence 11110 1123455677777665543 47889999999887653221110 000000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|+++..++.+.. . .++.+.+.|
T Consensus 219 ~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdg 251 (259)
T PRK06125 219 GRPATPEEVADLVAFLASPRSGYTSGTVVTVDG 251 (259)
T ss_pred CCCcCHHHHHHHHHHHcCchhccccCceEEecC
Confidence 124678999999998887542 2 356666764
No 227
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.05 Score=41.10 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +.+...++++ +++.+.-.+++.
T Consensus 76 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ 155 (262)
T PRK07831 76 CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNN 155 (262)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 48888888877664 4699999998531 1122223333 333320124443
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
++ .+.... .+...|..+|...+.+.+. .|+....++||.+...+...... .............
T Consensus 156 ss~~~~~~~-----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~----~~~~~~~~~~~~~ 226 (262)
T PRK07831 156 ASVLGWRAQ-----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS----AELLDELAAREAF 226 (262)
T ss_pred CchhhcCCC-----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC----HHHHHHHHhcCCC
Confidence 22 222111 1233577889888877653 47888999999876643221100 0000000000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.-+...+|+|+++..++.+.. . -|+.+.+.
T Consensus 227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~ 258 (262)
T PRK07831 227 GRAAEPWEVANVIAFLASDYSSYLTGEVVSVS 258 (262)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCceEEeC
Confidence 124568999999999887643 2 25666554
No 228
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.38 E-value=0.037 Score=41.07 Aligned_cols=140 Identities=7% Similarity=0.053 Sum_probs=75.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH-----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI-----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa-----~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++++++ ++.+ ..++|.
T Consensus 55 ~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~ 133 (239)
T TIGR01831 55 FDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIIT 133 (239)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence 58888888777654 3699999887431 12334555654 2234 456553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+....... .....|..+|...+.+.+ ..|+..+.++||++.......... .........+ .
T Consensus 134 vsS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~----~ 203 (239)
T TIGR01831 134 LASVSGVMGN----RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH--DLDEALKTVP----M 203 (239)
T ss_pred EcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH--HHHHHHhcCC----C
Confidence 432111111 112346667776654443 257889999999876543221110 0000000000 0
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
..+...+|+|+++..++.++. . .+..+.+.
T Consensus 204 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01831 204 NRMGQPAEVASLAGFLMSDGASYVTRQVISVN 235 (239)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 124568999999999988653 2 24555554
No 229
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.058 Score=40.69 Aligned_cols=138 Identities=9% Similarity=0.082 Sum_probs=76.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+ ...++..+++.+ -.++|.
T Consensus 75 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 153 (256)
T PRK12859 75 LDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINM 153 (256)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEE
Confidence 48889888887764 3699999997532 111 233455555544 346664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++...+. .++..+.++||++......... ........+ ..
T Consensus 154 sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~----~~~~~~~~~----~~ 221 (256)
T PRK12859 154 TSGQFQGP----MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI----KQGLLPMFP----FG 221 (256)
T ss_pred cccccCCC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH----HHHHHhcCC----CC
Confidence 43221110 11234577788888766442 5788899999987653211100 000000000 11
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.+...+|+|+++..++.... . -++.+.+.
T Consensus 222 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d 252 (256)
T PRK12859 222 RIGEPKDAARLIKFLASEEAEWITGQIIHSE 252 (256)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence 23568999999988887643 2 25656655
No 230
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.25 E-value=0.13 Score=38.92 Aligned_cols=142 Identities=8% Similarity=0.088 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-------C----------------ccc----HHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-------Q----------------FLD----QLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-------~----------------~~~----~~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++.. . ..+ .+.++..+++.| +
T Consensus 66 ~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g---~ 142 (258)
T PRK07370 66 CDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG---S 142 (258)
T ss_pred cCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC---e
Confidence 48889888877653 479999999853 1 011 233444444433 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..++.+.+. .|+....+.||++.......+... .. ........
T Consensus 143 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~--~~-~~~~~~~~ 215 (258)
T PRK07370 143 IVTLTYLGGVRAI----PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI--LD-MIHHVEEK 215 (258)
T ss_pred EEEEeccccccCC----cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc--hh-hhhhhhhc
Confidence 44 3432211110 1133567889888777553 478888999998765422111000 00 00000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
....-+...+|+|.++..++.++. .. ++.+.+.|
T Consensus 216 ~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg 251 (258)
T PRK07370 216 APLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDA 251 (258)
T ss_pred CCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence 001124567999999999887643 22 56677763
No 231
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.068 Score=39.39 Aligned_cols=93 Identities=9% Similarity=0.141 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHhhc-----cCcEEEEccCCCC---------------------cccHHHHHHHHHHc---CCccEEE--c
Q 038413 1 GELDEHEKIVSILK-----EVDVVISTVAYPQ---------------------FLDQLKIVHAIKVA---GNIKRFL--P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----g~d~V~~~~~~~~---------------------~~~~~~li~aa~~~---g~vkr~v--~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++.+++... + ..+++ .
T Consensus 52 ~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~s 130 (225)
T PRK08177 52 LDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMS 130 (225)
T ss_pred cCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEc
Confidence 48888888777665 5899999987531 12334555555421 2 23443 2
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA 96 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~ 96 (191)
|.+|....... .+...|..+|..++.+++. .++..+.++||++..
T Consensus 131 s~~g~~~~~~~--~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t 182 (225)
T PRK08177 131 SQLGSVELPDG--GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKT 182 (225)
T ss_pred cCccccccCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceec
Confidence 33443211110 1233467889888877653 357788889997654
No 232
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.12 Score=38.97 Aligned_cols=114 Identities=12% Similarity=0.076 Sum_probs=66.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHH----Hc----CCccEEEcCCcccCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIK----VA----GNIKRFLPSEFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~----~~----g~vkr~v~s~~g~~~ 56 (191)
+|+.|.+++.+.+.+.|++||+++... +.+..++++++. +. | ...++.|+.+...
T Consensus 65 ~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-~~iiv~ss~a~~~ 143 (245)
T PRK12367 65 WECGKEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-KEIWVNTSEAEIQ 143 (245)
T ss_pred eeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-eEEEEEecccccC
Confidence 488899999888889999999998531 222344444433 31 2 2233433322111
Q ss_pred CCCCCCCCchhhHHHHHHHHHHH----------HhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAI----------EAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l----------~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
. .....|..+|..++... ...++..+.+.||++.... . +...++
T Consensus 144 ~-----~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~---------~------------~~~~~~ 197 (245)
T PRK12367 144 P-----ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL---------N------------PIGIMS 197 (245)
T ss_pred C-----CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc---------C------------ccCCCC
Confidence 0 11234778888764221 1246667777777643221 0 012467
Q ss_pred hhhHHHHHHHHhcCc
Q 038413 127 EEDIAKCTIKVINDP 141 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~ 141 (191)
.+|+|+.++.++.+.
T Consensus 198 ~~~vA~~i~~~~~~~ 212 (245)
T PRK12367 198 ADFVAKQILDQANLG 212 (245)
T ss_pred HHHHHHHHHHHHhcC
Confidence 899999999998765
No 233
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.12 E-value=0.094 Score=39.73 Aligned_cols=143 Identities=10% Similarity=0.075 Sum_probs=75.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------cc----------------cHHHHHHH----HHHcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------FL----------------DQLKIVHA----IKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~~----------------~~~~li~a----a~~~g~vk 45 (191)
+|+.|.+++.++++ +.|++||+++... .+ +...+.++ +++.+ .
T Consensus 63 ~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~--g 140 (261)
T PRK08690 63 CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN--S 140 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC--c
Confidence 58899888877753 5799999997531 00 01122222 22221 2
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++| .|+.+..... .....|..+|...+.+.+ ..|+....+.||++.......... ..........
T Consensus 141 ~Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~---~~~~~~~~~~ 213 (261)
T PRK08690 141 AIVALSYLGAVRAI----PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD---FGKLLGHVAA 213 (261)
T ss_pred EEEEEcccccccCC----CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc---hHHHHHHHhh
Confidence 444 3443321111 112346678888776654 257888899999876542211100 0000000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+...+|||+++..++.++. . -++.+.+.|
T Consensus 214 ~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg 250 (261)
T PRK08690 214 HNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG 250 (261)
T ss_pred cCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence 0001235678999999999998643 2 366677764
No 234
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.079 Score=39.74 Aligned_cols=144 Identities=10% Similarity=0.049 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+..++++++. +.+.-.+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 57 MDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 48888888877653 5799999987421 123345556553 3320134553
Q ss_pred C-CcccCCCCCCCCCCchhhHHHHHHHHHHHHh--------cCCCeEEEecccccccccc-cccCCCCCCceEEEecCCc
Q 038413 50 S-EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVN-VLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s-~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 119 (191)
| .++.... .....|..+|...+.+.+. .|+..+.++||++...... .... ........-...
T Consensus 137 sS~~~~~~~-----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~---~~~~~~~~~~~~ 208 (252)
T PRK07677 137 VATYAWDAG-----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE---SEEAAKRTIQSV 208 (252)
T ss_pred cChhhccCC-----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC---CHHHHHHHhccC
Confidence 3 3332111 1123567788777766542 3788899999987632111 1000 000000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
....+...+|+|+++..++..+. . .++.+.+.+
T Consensus 209 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 243 (252)
T PRK07677 209 PLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDG 243 (252)
T ss_pred CCCCCCCHHHHHHHHHHHcCccccccCCCEEEECC
Confidence 01125678999998888776542 2 356666653
No 235
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.28 Score=36.04 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=72.1
Q ss_pred CCCCCHHHHHHhh---c--cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE-c
Q 038413 1 GELDEHEKIVSIL---K--EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~---~--g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v-~ 49 (191)
+|+.|.+++.+++ . ..|+|||+++... +.+..++++++.+ .+ .+++ .
T Consensus 51 ~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iv~i 128 (222)
T PRK06953 51 LDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAG--GVLAVL 128 (222)
T ss_pred ecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccC--CeEEEE
Confidence 5888988887754 3 4799999987641 1334666666653 22 1333 2
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHhc-----CCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEAV-----EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~-----~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
++ .+...... ..+...|..+|..++.+++.. ++..+.++||++..... . + ..
T Consensus 129 sS~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~--------~----------~--~~ 186 (222)
T PRK06953 129 SSRMGSIGDAT--GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMG--------G----------A--QA 186 (222)
T ss_pred cCccccccccc--CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCC--------C----------C--CC
Confidence 33 22211111 112235788999888887752 55667788886544210 0 0 12
Q ss_pred ecchhhHHHHHHHHhcCc-c-cCCceeEee
Q 038413 124 FNYEEDIAKCTIKVINDP-R-TCNRIVIYR 151 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~ 151 (191)
....++.+..+..++... . ..+..+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (222)
T PRK06953 187 ALDPAQSVAGMRRVIAQATRRDNGRFFQYD 216 (222)
T ss_pred CCCHHHHHHHHHHHHHhcCcccCceEEeeC
Confidence 357788888888877643 2 334444443
No 236
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.057 Score=40.28 Aligned_cols=135 Identities=12% Similarity=0.103 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc-----------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILK-----------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.+++. ..|++||+++... ..+ ...++..+++.+ ..
T Consensus 52 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ 130 (243)
T PRK07023 52 LDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ER 130 (243)
T ss_pred eccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CC
Confidence 58888888877542 3689999987531 112 344555555555 56
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEe---
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY--- 115 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~--- 115 (191)
+++. |+...... ..+...|..+|..++.+++. .++.+..++||++........... ........
T Consensus 131 ~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~~ 204 (243)
T PRK07023 131 RILHISSGAARNA----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRAT--DEERFPMRERF 204 (243)
T ss_pred EEEEEeChhhcCC----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhc--ccccchHHHHH
Confidence 7664 44322111 12344677889888888762 378889999998755432111000 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..-.....++..+|+|..++..+..++
T Consensus 205 ~~~~~~~~~~~~~~va~~~~~~l~~~~ 231 (243)
T PRK07023 205 RELKASGALSTPEDAARRLIAYLLSDD 231 (243)
T ss_pred HHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence 000001135678899997777777654
No 237
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.041 Score=41.21 Aligned_cols=144 Identities=11% Similarity=0.095 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhccC---------c--EEEEccCCCC--------------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILKEV---------D--VVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~---------d--~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.++++.+ + .++++++... ..+ .+.++..+++.+..+
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T PRK06924 55 LDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK 134 (251)
T ss_pred ecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence 5888988888777532 1 6777766421 111 345556565543145
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
++|. |+...... ..+...|..+|..++.+.+. .++....++||++..+........ ........
T Consensus 135 ~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~ 208 (251)
T PRK06924 135 RVINISSGAAKNP----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSS--SKEDFTNL 208 (251)
T ss_pred eEEEecchhhcCC----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhc--CcccchHH
Confidence 6653 43221111 12344677888888777642 357778889998765432211000 00000000
Q ss_pred c---CCcceeeecchhhHHHHHHHHhcCcc-cCCceeEe
Q 038413 116 G---NGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIY 150 (191)
Q Consensus 116 ~---~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i 150 (191)
. ......-+.+.+|+|+.+..++.++. ..++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 209 DRFITLKEEGKLLSPEYVAKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred HHHHHHhhcCCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence 0 00001125789999999999998743 22444444
No 238
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.88 E-value=0.17 Score=37.45 Aligned_cols=141 Identities=10% Similarity=0.065 Sum_probs=73.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcC-CccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAG-NIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g-~vkr~v~ 49 (191)
+|+.|.+++.+++. +.|++||+++... ..+. +.++..+++.+ ...+++.
T Consensus 53 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~ 132 (236)
T PRK06483 53 ADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH 132 (236)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 48888888776653 3799999998531 0111 22334443332 0124553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .++....++||++....... ....... ......+
T Consensus 133 ~ss~~~~~~~----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~---~~~~~~~- 201 (236)
T PRK06483 133 ITDYVVEKGS----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKA---LAKSLLK- 201 (236)
T ss_pred EcchhhccCC----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHH---hccCccc-
Confidence 332211110 1233577899988877663 24677789999764321000 0000000 0000001
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
-+...+|+|+++..++....-.++.+.+.|
T Consensus 202 ~~~~~~~va~~~~~l~~~~~~~G~~i~vdg 231 (236)
T PRK06483 202 IEPGEEEIIDLVDYLLTSCYVTGRSLPVDG 231 (236)
T ss_pred cCCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence 134679999999998874333467777764
No 239
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.88 E-value=0.083 Score=39.78 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=75.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v- 48 (191)
+|++|.+++.++++ ..|+++|+++... +.+...+.+++...- .-.+++
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~ 141 (252)
T PRK06079 62 CDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVT 141 (252)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEE
Confidence 48889888876653 4799999987521 011223333333210 002443
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+.+..... .....|..+|..++.+.+. .|+....+.||+........... ..............
T Consensus 142 iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~ 214 (252)
T PRK06079 142 LTYFGSERAI----PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG---HKDLLKESDSRTVD 214 (252)
T ss_pred EeccCccccC----CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC---hHHHHHHHHhcCcc
Confidence 3332211110 1123567789888877653 47888999999876543221100 00000000000001
Q ss_pred eeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.-+...+|||+++..++.+. .. -++.+.+.|
T Consensus 215 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 247 (252)
T PRK06079 215 GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK 247 (252)
T ss_pred cCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence 12567899999999988764 22 356666653
No 240
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.85 E-value=0.18 Score=38.02 Aligned_cols=147 Identities=9% Similarity=0.070 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----c----------------cc----HHHHHHHHH-HcCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----F----------------LD----QLKIVHAIK-VAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----~----------------~~----~~~li~aa~-~~g~vkr~ 47 (191)
+|+.|.+++.++++ +.|++||+++... . .+ ...++..+. +.+ -.++
T Consensus 55 ~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~i 133 (259)
T PRK08340 55 ADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVL 133 (259)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEE
Confidence 48889888877763 5799999998521 0 00 122333333 233 3466
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-C-C---CCCCce--E
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-R-P---FEPHDD--V 112 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-~-~---~~~~~~--~ 112 (191)
|. |+...... ..+...|..+|..++.+.+. .|+....+.||++......... . . ...... .
T Consensus 134 v~isS~~~~~~----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 209 (259)
T PRK08340 134 VYLSSVSVKEP----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWE 209 (259)
T ss_pred EEEeCcccCCC----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHH
Confidence 53 43221111 11234566788887776653 4677888999987664321100 0 0 000000 0
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..........-+...+|||++++.++.++. . -++.+.+.|
T Consensus 210 ~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdg 251 (259)
T PRK08340 210 REVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDG 251 (259)
T ss_pred HHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecC
Confidence 000000000125678999999999888643 3 356666664
No 241
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.089 Score=39.75 Aligned_cols=147 Identities=5% Similarity=0.020 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ....+.++..+++.+ ..+++.
T Consensus 66 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 144 (265)
T PRK07062 66 CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCV 144 (265)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEe
Confidence 48889888776653 4799999998532 011344555666665 456653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccccc-ccCCCCCCceEEEe------
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNV-LLRPFEPHDDVVVY------ 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~-~~~~~~~~~~~~~~------ 115 (191)
|+....... .....|..+|...+.+.+ ..|+..+.++||++....... +............+
T Consensus 145 sS~~~~~~~----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T PRK07062 145 NSLLALQPE----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR 220 (265)
T ss_pred ccccccCCC----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh
Confidence 432211111 112345567776655543 258899999999876543221 10000000000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+....-+...+|+|+++..++.+.. . -++.+.+.|
T Consensus 221 ~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 259 (265)
T PRK07062 221 KKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSG 259 (265)
T ss_pred cCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence 000001124578999999998887532 2 356677763
No 242
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.11 Score=40.28 Aligned_cols=133 Identities=14% Similarity=0.068 Sum_probs=73.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc---CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA---GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~---g~vkr~v~-s 50 (191)
+|++|.+++.++++ ..|+|||+++... +.+..++++++... . -.++|. |
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~is 142 (296)
T PRK05872 64 ADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVS 142 (296)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEe
Confidence 48889888877653 4799999998632 12234444544321 1 235553 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC-c-ce
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-E-AK 121 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~ 121 (191)
+.+..... .....|..+|..++.+.+. .|+..+.++||++.......... ........... . ..
T Consensus 143 S~~~~~~~----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~~~~~~~~~~~~~~p~ 215 (296)
T PRK05872 143 SLAAFAAA----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---DLPAFRELRARLPWPL 215 (296)
T ss_pred CHhhcCCC----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---cchhHHHHHhhCCCcc
Confidence 42211111 1234577888888776542 57888999999876543221100 00000000000 0 01
Q ss_pred eeecchhhHHHHHHHHhcCc
Q 038413 122 AVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+...+|+|+.+..++.+.
T Consensus 216 ~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 216 RRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 23567999999999998864
No 243
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.73 E-value=0.3 Score=36.85 Aligned_cols=146 Identities=9% Similarity=-0.053 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHH----HcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIK----VAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~----~~g~vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++. +.+ .
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g 136 (263)
T PRK06200 59 GDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--G 136 (263)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--C
Confidence 48888888777664 4799999998531 011233344433 333 2
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccc-cCCC---CCC-c-eE
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVL-LRPF---EPH-D-DV 112 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~-~~~~---~~~-~-~~ 112 (191)
++| .++....... .....|..+|..++.+.+. .++....+.||++........ .... ... . ..
T Consensus 137 ~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~ 212 (263)
T PRK06200 137 SMIFTLSNSSFYPG----GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA 212 (263)
T ss_pred EEEEECChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchh
Confidence 444 3332111111 1233577889888877653 247778889998765432110 0000 000 0 00
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCc-c-c-CCceeEeec
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDP-R-T-CNRIVIYRP 152 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~-~-~~~~~~i~~ 152 (191)
..........-+...+|+|.++..++.++ . . -++.+.+.|
T Consensus 213 ~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdg 255 (263)
T PRK06200 213 DMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADG 255 (263)
T ss_pred HHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcC
Confidence 00001110123567899999999988765 3 2 356677764
No 244
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.18 Score=39.17 Aligned_cols=96 Identities=13% Similarity=0.039 Sum_probs=57.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------ccc----HHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FLD----QLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~~----~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ +..+++.+++.+ ..++|. |+
T Consensus 74 ~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 152 (306)
T PRK06197 74 LDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS 152 (306)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence 58889888877764 4799999998531 112 456777887776 667763 43
Q ss_pred cccC----C--CCC---CCCCCchhhHHHHHHHHHHHHh-------cCCCeEE--Eeccccccc
Q 038413 52 FGCE----E--DRV---RPLPPFEAYLEKKRIVRRAIEA-------VEIPYTF--VSANCYGAY 97 (191)
Q Consensus 52 ~g~~----~--~~~---~~~~~~~~~~~~k~~~e~~l~~-------~~~~~ti--lrp~~~~~~ 97 (191)
.+.. . ... ....+...|..+|...+.+.+. .+++.++ +.||+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 153 GGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 2210 0 000 0112345677899887766543 3555443 468876554
No 245
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.18 Score=38.55 Aligned_cols=141 Identities=12% Similarity=0.079 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------ccc----HHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLD----QLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~----~~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|++||+++... +.+ ++.++..+++.| +
T Consensus 62 ~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g---~ 138 (274)
T PRK08415 62 LDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA---S 138 (274)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC---c
Confidence 48899888877653 4799999998521 011 233333443333 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..+..+.+. .|+....+.||++......... ... ...... ..
T Consensus 139 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~-~~~~~~-~~ 210 (274)
T PRK08415 139 VLTLSYLGGVKYV----PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG--DFR-MILKWN-EI 210 (274)
T ss_pred EEEEecCCCccCC----CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc--hhh-HHhhhh-hh
Confidence 44 3443221111 1123466788887766543 4788888999987653211100 000 000000 00
Q ss_pred cce-eeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
..+ .-+...+|||++++.++.++ .. -++.+.+.|
T Consensus 211 ~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdG 247 (274)
T PRK08415 211 NAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDA 247 (274)
T ss_pred hCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcC
Confidence 011 12467899999999988764 22 356677764
No 246
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=95.64 E-value=0.16 Score=37.61 Aligned_cols=135 Identities=15% Similarity=0.203 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHh---hccCcEEEEccCCCC---------c--------------------ccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSI---LKEVDVVISTVAYPQ---------F--------------------LDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a---~~g~d~V~~~~~~~~---------~--------------------~~~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++ +.+.|+|||+++... . ...+.++..+++.+ ..+++
T Consensus 50 ~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~ 128 (235)
T PRK09009 50 LDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFA 128 (235)
T ss_pred ecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEE
Confidence 488888876664 447899999998641 0 01223444455454 44544
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
.|+ .+...... ..+...|..+|..++.+++. .++....+.||.......... .. ..+
T Consensus 129 ~iss~~~~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~---~~~-- 196 (235)
T PRK09009 129 VISAKVGSISDNR--LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----QQ---NVP-- 196 (235)
T ss_pred EEeecccccccCC--CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----hh---ccc--
Confidence 332 33211111 12234577789888877653 245566678887554321110 00 001
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
...++..+|+|+.+..++..+. ..+..+.+.
T Consensus 197 ---~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 197 ---KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred ---cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 1224678999999999998753 234555554
No 247
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=95.55 E-value=0.42 Score=36.50 Aligned_cols=125 Identities=15% Similarity=0.223 Sum_probs=75.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEE--
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFL-- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v-- 48 (191)
.|+.+++++.+... .+|++++++|... ..-+..++.-+.+.| --++|
T Consensus 63 ~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI 141 (265)
T COG0300 63 ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINI 141 (265)
T ss_pred CcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888888777653 5899999999753 112344455555554 33555
Q ss_pred cCCcccCCCCCCCCCCc-hhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEFGCEEDRVRPLPPF-EAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~-~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|..|... .|. ..|..+|..+-.+ |+.+|+..+.+.||+....+... .. .+... ...
T Consensus 142 ~S~ag~~p------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~----~~~~~----~~~ 206 (265)
T COG0300 142 GSAAGLIP------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KG----SDVYL----LSP 206 (265)
T ss_pred echhhcCC------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-cc----ccccc----ccc
Confidence 23333221 232 3466788655444 34468999999999877654331 00 00000 011
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..-+.+.+|+|+.....+...
T Consensus 207 ~~~~~~~~~va~~~~~~l~~~ 227 (265)
T COG0300 207 GELVLSPEDVAEAALKALEKG 227 (265)
T ss_pred hhhccCHHHHHHHHHHHHhcC
Confidence 245678999999999999874
No 248
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.41 E-value=0.15 Score=38.62 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=48.9
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce--eeecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK--AVFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~i~~~Dva~~~~ 135 (191)
...|..+|..++.+.+. .|+..+.++||++..+. .. ...... .+.. ..+ ..+...+|+|.+++
T Consensus 170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~--~~-~~~~~~----~~~~-~~~~~~~~~~~~~va~~~~ 241 (267)
T TIGR02685 170 FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD--AM-PFEVQE----DYRR-KVPLGQREASAEQIADVVI 241 (267)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc--cc-chhHHH----HHHH-hCCCCcCCCCHHHHHHHHH
Confidence 34677899988877653 47999999999864321 00 000000 0000 001 12457899999999
Q ss_pred HHhcCcc-c-CCceeEeecCCCcc
Q 038413 136 KVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 136 ~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.++.++. . .++.+.+.+ +..+
T Consensus 242 ~l~~~~~~~~~G~~~~v~g-g~~~ 264 (267)
T TIGR02685 242 FLVSPKAKYITGTCIKVDG-GLSL 264 (267)
T ss_pred HHhCcccCCcccceEEECC-ceec
Confidence 9887643 2 366667764 4443
No 249
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.4 Score=35.74 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred ccCcEEEEccCCCC--------------------cccHHHHHHH----HHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 14 KEVDVVISTVAYPQ--------------------FLDQLKIVHA----IKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 14 ~g~d~V~~~~~~~~--------------------~~~~~~li~a----a~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
...|+|||+++... +.+..+++++ +++.+ .++++. |+....... .....|
T Consensus 91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~----~~~~~Y 165 (247)
T PRK08945 91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR----ANWGAY 165 (247)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC----CCCccc
Confidence 35799999987521 1233334444 45666 778763 442211111 112356
Q ss_pred HHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 69 LEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 69 ~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+|..++.+++. .++..+.++||.+........ . .. .....+...+|+++++..++.++
T Consensus 166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~-~---~~---------~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA-F---PG---------EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh-c---Cc---------ccccCCCCHHHHHHHHHHHhCcc
Confidence 7788887776653 367788889886544210000 0 00 00123567899999999988764
Q ss_pred c
Q 038413 142 R 142 (191)
Q Consensus 142 ~ 142 (191)
.
T Consensus 233 ~ 233 (247)
T PRK08945 233 S 233 (247)
T ss_pred c
Confidence 3
No 250
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.38 E-value=0.2 Score=37.85 Aligned_cols=142 Identities=10% Similarity=0.067 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccH----HHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQ----LKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~----~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++++++... ..+. +.++..+++.| +
T Consensus 67 ~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g---~ 143 (258)
T PRK07533 67 LDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG---S 143 (258)
T ss_pred cCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC---E
Confidence 48888888776653 4799999987521 0111 22333333333 3
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++ .|+.+..... .....|..+|..++.+.+. .|+....+.||............ .. .........
T Consensus 144 Ii~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~ 216 (258)
T PRK07533 144 LLTMSYYGAEKVV----ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD--FD-ALLEDAAER 216 (258)
T ss_pred EEEEeccccccCC----ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC--cH-HHHHHHHhc
Confidence 43 3443321111 1123466788887766542 57888899999876543211100 00 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
.....+...+|+|++++.++.++ . --++.+.+.|
T Consensus 217 ~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 252 (258)
T PRK07533 217 APLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDG 252 (258)
T ss_pred CCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence 00012467899999999988764 2 2356666653
No 251
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.34 E-value=0.45 Score=36.31 Aligned_cols=141 Identities=9% Similarity=0.111 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHH----HHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAI----KVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa----~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++.+++ ++.| +
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G---~ 140 (271)
T PRK06505 64 CDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG---S 140 (271)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc---e
Confidence 58899888776653 4799999998431 11122233332 2223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+....... .....|..+|..++.+.+. .|+....+.||++.......... ........ ..
T Consensus 141 Iv~isS~~~~~~~----~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~---~~~~~~~~-~~ 212 (271)
T PRK06505 141 MLTLTYGGSTRVM----PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD---ARAIFSYQ-QR 212 (271)
T ss_pred EEEEcCCCccccC----CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc---hHHHHHHH-hh
Confidence 44 2332111110 1123567888888766543 47888899999876532111100 00000000 00
Q ss_pred cce-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+ .-+...+|+|++++.++.++. . -++.+.+.|
T Consensus 213 ~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg 249 (271)
T PRK06505 213 NSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS 249 (271)
T ss_pred cCCccccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence 001 124578999999999887643 2 256677764
No 252
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.29 Score=37.41 Aligned_cols=144 Identities=10% Similarity=0.126 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v- 48 (191)
+|+.|.+++.++++ ..|+++|+++... +.+...+++++...= .-.++|
T Consensus 67 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~ 146 (272)
T PRK08159 67 CDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILT 146 (272)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 58889888887653 4799999997421 112233444433210 002333
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+.+..... .....|..+|..++.+.+. .|+....+.||++......... .. ....-+.....+
T Consensus 147 iss~~~~~~~----p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~--~~~~~~~~~~~p 218 (272)
T PRK08159 147 LTYYGAEKVM----PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG--DF--RYILKWNEYNAP 218 (272)
T ss_pred EeccccccCC----CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC--cc--hHHHHHHHhCCc
Confidence 3443321110 1123466788888776653 4788888999987653211100 00 000000000011
Q ss_pred -eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 -AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 -~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|++++.++.+.. . -++.+.+.|
T Consensus 219 ~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdg 252 (272)
T PRK08159 219 LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS 252 (272)
T ss_pred ccccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence 124678999999999987643 2 366777774
No 253
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.30 E-value=0.19 Score=39.33 Aligned_cols=25 Identities=12% Similarity=0.310 Sum_probs=20.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
+|+.|.+++.++++ ..|+|||+++.
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~ 93 (322)
T PRK07453 62 IDLGDLDSVRRFVDDFRALGKPLDALVCNAAV 93 (322)
T ss_pred ecCCCHHHHHHHHHHHHHhCCCccEEEECCcc
Confidence 48899998887775 38999999984
No 254
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.28 E-value=0.044 Score=44.15 Aligned_cols=45 Identities=20% Similarity=0.318 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s 50 (191)
.|+.|.++|.++++++|+|++++++. ....++++|.++| + ++|..
T Consensus 53 ~d~~~~~~l~~~~~~~dvVin~~gp~---~~~~v~~~~i~~g-~-~yvD~ 97 (386)
T PF03435_consen 53 VDVNDPESLAELLRGCDVVINCAGPF---FGEPVARACIEAG-V-HYVDT 97 (386)
T ss_dssp --TTTHHHHHHHHTTSSEEEE-SSGG---GHHHHHHHHHHHT---EEEES
T ss_pred EecCCHHHHHHHHhcCCEEEECCccc---hhHHHHHHHHHhC-C-Ceecc
Confidence 48899999999999999999999865 5578999999999 5 67753
No 255
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.28 E-value=0.22 Score=37.87 Aligned_cols=152 Identities=13% Similarity=0.105 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------c----------------ccHHHHHHHHHH---cCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------F----------------LDQLKIVHAIKV---AGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~----------------~~~~~li~aa~~---~g~vkr 46 (191)
+|+.|.+++.++++ ..|++||+++... . .+...+.+++.. .+ .+
T Consensus 63 ~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g~ 140 (262)
T PRK07984 63 CDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SA 140 (262)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--cE
Confidence 58899888887763 3799999997421 0 011123333321 11 23
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++ .|+.+..... .....|..+|..++.+.+. .|+....+.||+......... .... .........
T Consensus 141 Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~--~~~~-~~~~~~~~~ 213 (262)
T PRK07984 141 LLTLSYLGAERAI----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--KDFR-KMLAHCEAV 213 (262)
T ss_pred EEEEecCCCCCCC----CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC--CchH-HHHHHHHHc
Confidence 44 3443321111 1123466789888877653 478888899998755321100 0000 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHH
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e 161 (191)
....-+...+|||+++..++.++. -.++.+.+.++-....++|
T Consensus 214 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~~~~~~ 258 (262)
T PRK07984 214 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE 258 (262)
T ss_pred CCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccccccch
Confidence 000134678999999999887642 2366777764213344444
No 256
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.24 E-value=0.63 Score=37.90 Aligned_cols=114 Identities=14% Similarity=0.186 Sum_probs=66.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHH----HHcCC-c-cE-EEc-CCcccCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAI----KVAGN-I-KR-FLP-SEFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa----~~~g~-v-kr-~v~-s~~g~~~ 56 (191)
+|+.|.+++.+.+.++|++||++|... ..+..++++++ ++.+. . +. ++. |+.+..
T Consensus 231 ~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~- 309 (406)
T PRK07424 231 WQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVN- 309 (406)
T ss_pred eeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccccc-
Confidence 488999999999999999999987531 22334444443 33330 1 12 333 332111
Q ss_pred CCCCCCCCc-hhhHHHHHHHHHHH--Hh--cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHH
Q 038413 57 DRVRPLPPF-EAYLEKKRIVRRAI--EA--VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 57 ~~~~~~~~~-~~~~~~k~~~e~~l--~~--~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.+. ..|..+|.++..+. +. .+.....+.||++.... .+...++.+|+|
T Consensus 310 ------~~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~---------------------~~~~~~spe~vA 362 (406)
T PRK07424 310 ------PAFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL---------------------NPIGVMSADWVA 362 (406)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC---------------------CcCCCCCHHHHH
Confidence 122 24778998887743 22 34445555666533210 011246889999
Q ss_pred HHHHHHhcCcc
Q 038413 132 KCTIKVINDPR 142 (191)
Q Consensus 132 ~~~~~~l~~~~ 142 (191)
+.++..+..++
T Consensus 363 ~~il~~i~~~~ 373 (406)
T PRK07424 363 KQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHCCC
Confidence 99999998753
No 257
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.22 E-value=0.22 Score=37.65 Aligned_cols=147 Identities=9% Similarity=-0.032 Sum_probs=76.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------------cccHHHHHHHHH----Hc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------------FLDQLKIVHAIK----VA 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------------~~~~~~li~aa~----~~ 41 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++. +.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (266)
T PRK06171 56 TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ 135 (266)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc
Confidence 48889888877664 4799999997421 122344555544 33
Q ss_pred CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccc--ccC---C--C
Q 038413 42 GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNV--LLR---P--F 106 (191)
Q Consensus 42 g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~--~~~---~--~ 106 (191)
+ -.++|. |+....... .....|..+|..++.+.+. .|+....++||.+....+.. ... . .
T Consensus 136 ~-~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~ 210 (266)
T PRK06171 136 H-DGVIVNMSSEAGLEGS----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG 210 (266)
T ss_pred C-CcEEEEEccccccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence 3 335553 332111111 1234567788888766543 47889999999874211110 000 0 0
Q ss_pred CC-CceEEEecC--CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 107 EP-HDDVVVYGN--GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 107 ~~-~~~~~~~~~--g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.. ......+.. ......+...+|||.++..++.+.. . -++.+.+.|
T Consensus 211 ~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg 261 (266)
T PRK06171 211 ITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG 261 (266)
T ss_pred CCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence 00 000000000 0001124567999999988887543 2 256666653
No 258
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.36 Score=36.53 Aligned_cols=144 Identities=11% Similarity=0.072 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------c----------------ccHHHHHHHHHHc--CCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------F----------------LDQLKIVHAIKVA--GNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~----------------~~~~~li~aa~~~--g~vkr~ 47 (191)
+|+.|.+++.++++ ..|+++++++... . .+...+.+++... + -.++
T Consensus 63 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-~g~I 141 (260)
T PRK06997 63 CDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-DASL 141 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-CceE
Confidence 48899988887763 4799999987521 0 0111223332221 1 1244
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+ .|+.+..... .....|..+|..+..+.+. .|+....+.||++.......... .. ..........
T Consensus 142 i~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--~~-~~~~~~~~~~ 214 (260)
T PRK06997 142 LTLSYLGAERVV----PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD--FG-KILDFVESNA 214 (260)
T ss_pred EEEeccccccCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc--hh-hHHHHHHhcC
Confidence 4 3433221111 1133477889888776553 47888889999865531111000 00 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...-+...+|||+++..++.++. . -++.+.+.|
T Consensus 215 p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 249 (260)
T PRK06997 215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDS 249 (260)
T ss_pred cccccCCHHHHHHHHHHHhCccccCcceeEEEEcC
Confidence 00124678999999999988642 2 256666653
No 259
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=94.99 E-value=0.047 Score=40.76 Aligned_cols=141 Identities=11% Similarity=0.179 Sum_probs=77.1
Q ss_pred CCCCCHHHHHHhh--------ccCcEEEEccCCCCc-----------------------cc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSIL--------KEVDVVISTVAYPQF-----------------------LD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~--------~g~d~V~~~~~~~~~-----------------------~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.+++ ...|+++|+++.... .. .+.++..+++.|
T Consensus 51 ~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--- 127 (241)
T PF13561_consen 51 CDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG--- 127 (241)
T ss_dssp SCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE---
T ss_pred ecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---
Confidence 4788888877764 357999998865320 11 233344444444
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------h-cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------A-VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~-~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
++| .|+.+..... .....|..+|..++.+.+ . .|+....+.||++........... .+......
T Consensus 128 sii~iss~~~~~~~----~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~---~~~~~~~~ 200 (241)
T PF13561_consen 128 SIINISSIAAQRPM----PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN---EEFLEELK 200 (241)
T ss_dssp EEEEEEEGGGTSBS----TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH---HHHHHHHH
T ss_pred CcccccchhhcccC----ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc---cchhhhhh
Confidence 333 3332221111 123356678888877654 3 578888999999886532221100 00000000
Q ss_pred CCcce-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 117 NGEAK-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 117 ~g~~~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
...+ .-+...+|||.++..++.+.. .. |+.+.+.|
T Consensus 201 -~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 201 -KRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp -HHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred -hhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 0001 123579999999999998753 33 67777764
No 260
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.97 E-value=0.44 Score=36.03 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------c----------------ccHHHHHHHHH----HcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------F----------------LDQLKIVHAIK----VAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------~----------------~~~~~li~aa~----~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++... . .+...+++++. +.| +
T Consensus 66 ~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g---~ 142 (257)
T PRK08594 66 CDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG---S 142 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc---e
Confidence 48889888877653 3799999987421 0 01122233333 223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+....... .....|..+|..++.+.+. .|+....+.||++.......... ... ........
T Consensus 143 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~~-~~~~~~~~ 215 (257)
T PRK08594 143 IVTLTYLGGERVV----QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG--FNS-ILKEIEER 215 (257)
T ss_pred EEEEcccCCccCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc--ccH-HHHHHhhc
Confidence 44 3332211110 1123567889888776543 47888899999876542111100 000 00000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.....+...+|+|++++.++.+.. . -++.+.+.|
T Consensus 216 ~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg 251 (257)
T PRK08594 216 APLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDS 251 (257)
T ss_pred CCccccCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence 001124678999999999887643 2 256666653
No 261
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.93 E-value=1.1 Score=33.23 Aligned_cols=62 Identities=10% Similarity=-0.045 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHHHHh-------c-CCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 66 EAYLEKKRIVRRAIEA-------V-EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~-~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
..|..+|..++.+++. . ++..+.++||.+......... + +.........+|++..+.-.
T Consensus 158 ~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~ 224 (239)
T PRK08703 158 GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------P--GEAKSERKSYGDVLPAFVWW 224 (239)
T ss_pred cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------C--CCCccccCCHHHHHHHHHHH
Confidence 3577889888877653 1 477888999987764321110 1 11112346889999998888
Q ss_pred hcC
Q 038413 138 IND 140 (191)
Q Consensus 138 l~~ 140 (191)
+..
T Consensus 225 ~~~ 227 (239)
T PRK08703 225 ASA 227 (239)
T ss_pred hCc
Confidence 874
No 262
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.77 Score=35.30 Aligned_cols=140 Identities=6% Similarity=0.044 Sum_probs=73.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCC-----cc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGN-----IK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~-----vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+.+ .+++.+. -.
T Consensus 71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 150 (286)
T PRK07791 71 DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA 150 (286)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 48888888776653 4799999998632 122223333 3332210 02
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++|. |+....... .....|..+|..++.+.+. .|+....+.|| ........... .... ...
T Consensus 151 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-~~~~----~~~- 219 (286)
T PRK07791 151 RIINTSSGAGLQGS----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-EMMA----KPE- 219 (286)
T ss_pred EEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-HHHh----cCc-
Confidence 4552 432211111 1133567788887766542 57888889998 32211111000 0000 000
Q ss_pred CcceeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
..+..+...+|+|++++.++.+. . ..++.+.+.|
T Consensus 220 -~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdg 255 (286)
T PRK07791 220 -EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG 255 (286)
T ss_pred -ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcC
Confidence 11123467899999999988754 2 2367777764
No 263
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.86 E-value=1.1 Score=33.02 Aligned_cols=124 Identities=10% Similarity=0.024 Sum_probs=71.1
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCC---------C---------------cccHHHHHHH----HHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYP---------Q---------------FLDQLKIVHA----IKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~---------~---------------~~~~~~li~a----a~~~g~vkr~v 48 (191)
+|+.|.+++.++++ ..|++||+++.. . +.+..+++++ +++.| ++|
T Consensus 51 ~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g---~Iv 127 (223)
T PRK05884 51 CDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG---SII 127 (223)
T ss_pred cCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---eEE
Confidence 58999999888775 579999997631 0 0111223333 22223 444
Q ss_pred -cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 -PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 -~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+... .....|..+|..++.+.+. .|+....+.||++....... .. .
T Consensus 128 ~isS~~~--------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-----~~----------~- 183 (223)
T PRK05884 128 SVVPENP--------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-----LS----------R- 183 (223)
T ss_pred EEecCCC--------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh-----cc----------C-
Confidence 233220 1234577888888766543 47888889999865421100 00 0
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.-..+|+++.+..++..+. . -++.+.+.|
T Consensus 184 -~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg 216 (223)
T PRK05884 184 -TPPPVAAEIARLALFLTTPAARHITGQTLHVSH 216 (223)
T ss_pred -CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence 011267999999998877643 3 256666663
No 264
>PTZ00325 malate dehydrogenase; Provisional
Probab=94.81 E-value=0.039 Score=43.34 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=35.1
Q ss_pred CHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|+.++.++++|+|+|+++++... .+..+++++++++++ +++++.
T Consensus 66 d~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~ivi 122 (321)
T PTZ00325 66 DGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVG 122 (321)
T ss_pred CCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence 43445678999999999998743 246789999999999 999763
No 265
>PRK06484 short chain dehydrogenase; Validated
Probab=94.79 E-value=0.6 Score=39.07 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-----C----------------cccH----HHHHHHHHHcCCcc-EE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-----Q----------------FLDQ----LKIVHAIKVAGNIK-RF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-----~----------------~~~~----~~li~aa~~~g~vk-r~ 47 (191)
+|+.|++++.++++ +.|++||+++.. . +.+. +.++..+++.+ -. ++
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~i 136 (520)
T PRK06484 58 MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAI 136 (520)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeE
Confidence 48888888877764 479999998751 0 1122 33344443333 22 55
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
| .|+....... .....|..+|..++.+.+. .++..+.++||++........... ............
T Consensus 137 v~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~ 210 (520)
T PRK06484 137 VNVASGAGLVAL----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERA--GKLDPSAVRSRI 210 (520)
T ss_pred EEECCcccCCCC----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhccc--chhhhHHHHhcC
Confidence 4 3432211111 1123567788888776542 478889999997755432211100 000000000000
Q ss_pred ceeeecchhhHHHHHHHHhcC
Q 038413 120 AKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~ 140 (191)
....+...+|+|+++..++.+
T Consensus 211 ~~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 211 PLGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred CCCCCcCHHHHHHHHHHHhCc
Confidence 001245788999988887764
No 266
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=94.79 E-value=0.15 Score=38.42 Aligned_cols=136 Identities=11% Similarity=0.044 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHhhcc-----------CcEEEEccCCCC-----c-----------------cc----HHHHHHHHHHc-C
Q 038413 1 GELDEHEKIVSILKE-----------VDVVISTVAYPQ-----F-----------------LD----QLKIVHAIKVA-G 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-----------~d~V~~~~~~~~-----~-----------------~~----~~~li~aa~~~-g 42 (191)
+|+.|.+++.++++. .|++||+++... . .+ ...++..+++. +
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~ 141 (256)
T TIGR01500 62 LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG 141 (256)
T ss_pred eccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC
Confidence 488898888776642 158999887421 0 01 23344445443 2
Q ss_pred CccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 43 NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 43 ~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
.-.+++. |+....... .....|..+|..++.+.+. .|+....+.||++....................
T Consensus 142 ~~~~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 217 (256)
T TIGR01500 142 LNRTVVNISSLCAIQPF----KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKG 217 (256)
T ss_pred CCCEEEEECCHHhCCCC----CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHH
Confidence 0135553 442211110 1234577889888776653 467778888998765432211000000000000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
.........+...+|+|+.++.++.+
T Consensus 218 ~~~~~~~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 218 LQELKAKGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence 00000011256889999999999864
No 267
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.68 E-value=0.37 Score=36.43 Aligned_cols=141 Identities=11% Similarity=0.155 Sum_probs=74.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHH----HHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHA----IKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~a----a~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|++++.++... ..+...++++ +++.| +
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G---~ 141 (260)
T PRK06603 65 LDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG---S 141 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---e
Confidence 48899888887763 4799999887421 0111222222 22223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..++.+.+. .|+....+.||.+.......... .. ........
T Consensus 142 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~- 213 (260)
T PRK06603 142 IVTLTYYGAEKVI----PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD--FS-TMLKSHAA- 213 (260)
T ss_pred EEEEecCccccCC----CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC--cH-HHHHHHHh-
Confidence 44 3433221111 1123466788887766542 57888889999876542111000 00 00000000
Q ss_pred cce-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+ .-+...+|+|++++.++.++. . -++.+.+.|
T Consensus 214 ~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg 250 (260)
T PRK06603 214 TAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDC 250 (260)
T ss_pred cCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence 001 124678999999999987643 3 256667763
No 268
>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []. It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.
Probab=94.27 E-value=0.13 Score=41.04 Aligned_cols=80 Identities=13% Similarity=0.243 Sum_probs=56.0
Q ss_pred hccCcEEEEccCCCC------------c--ccHHHHHHHHH----HcCCccEEE-cCCcccCCCCCCCCCCchhhHHHHH
Q 038413 13 LKEVDVVISTVAYPQ------------F--LDQLKIVHAIK----VAGNIKRFL-PSEFGCEEDRVRPLPPFEAYLEKKR 73 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~------------~--~~~~~li~aa~----~~g~vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~ 73 (191)
+.++..+|++.|... + +-...|+++.. ..+ .|++| .++++...- ....+|.+.|.
T Consensus 201 l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~-----s~~f~Yfk~K~ 274 (410)
T PF08732_consen 201 LDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAI-----SSMFPYFKTKG 274 (410)
T ss_pred hhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchh-----hhhhhhhHHHH
Confidence 446778888887642 2 23466777776 677 88866 467764321 23568999999
Q ss_pred HHHHHHHhc---CCC-eEEEecccccccc
Q 038413 74 IVRRAIEAV---EIP-YTFVSANCYGAYF 98 (191)
Q Consensus 74 ~~e~~l~~~---~~~-~tilrp~~~~~~~ 98 (191)
+.|+-|... .++ .+|||||+..|.-
T Consensus 275 ~LE~dl~~~l~~~l~~lvILRPGplvG~h 303 (410)
T PF08732_consen 275 ELENDLQNLLPPKLKHLVILRPGPLVGEH 303 (410)
T ss_pred HHHHHHHhhcccccceEEEecCccccCCC
Confidence 999999874 244 7899999988753
No 269
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.87 E-value=0.29 Score=34.97 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.|++++.++++. .+.|||+++... +.+..+|.++..... ++.|+. ||..
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis 138 (181)
T PF08659_consen 60 CDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSIS 138 (181)
T ss_dssp --TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHH
T ss_pred cCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChh
Confidence 589999999988753 478999998642 245678888888877 888774 5421
Q ss_pred cCCCCCCCCCCc-hhhHHHHHHHHHHH---HhcCCCeEEEeccc
Q 038413 54 CEEDRVRPLPPF-EAYLEKKRIVRRAI---EAVEIPYTFVSANC 93 (191)
Q Consensus 54 ~~~~~~~~~~~~-~~~~~~k~~~e~~l---~~~~~~~tilrp~~ 93 (191)
.-.. .+. ..|..+..-++.+. +..|.+++.+.-+.
T Consensus 139 ~~~G-----~~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 139 SLLG-----GPGQSAYAAANAFLDALARQRRSRGLPAVSINWGA 177 (181)
T ss_dssp HHTT------TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred Hhcc-----CcchHhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence 1110 112 23434443333332 34688888887553
No 270
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.57 E-value=0.71 Score=34.80 Aligned_cols=81 Identities=11% Similarity=-0.042 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee--eecchhhHHHHHHHH
Q 038413 67 AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA--VFNYEEDIAKCTIKV 137 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~i~~~Dva~~~~~~ 137 (191)
.|..+|..+..+.+. .|+....+.||++.......+.. .. .....+. ...+. .+...+|+|+.++.+
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~-~~~~~~~-~~~p~~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG--FE-LLEEGWD-ERAPLGWDVKDPTPVARAVVAL 232 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC--cH-HHHHHHH-hcCccccccCCHHHHHHHHHHH
Confidence 456788887766542 57888889999876643221100 00 0000000 01111 356789999999999
Q ss_pred hcCcc-c-CCceeEee
Q 038413 138 INDPR-T-CNRIVIYR 151 (191)
Q Consensus 138 l~~~~-~-~~~~~~i~ 151 (191)
+.++. . -++.+.+.
T Consensus 233 ~s~~~~~~tG~~i~vd 248 (256)
T PRK07889 233 LSDWFPATTGEIVHVD 248 (256)
T ss_pred hCcccccccceEEEEc
Confidence 88643 2 35666665
No 271
>PRK05599 hypothetical protein; Provisional
Probab=93.46 E-value=2.4 Score=31.64 Aligned_cols=129 Identities=9% Similarity=0.083 Sum_probs=71.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------c-------------ccH----HHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------F-------------LDQ----LKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------~-------------~~~----~~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|+++++++... . .+. ..++..+++.+.-.++| .
T Consensus 56 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~i 135 (246)
T PRK05599 56 FDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAF 135 (246)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 48888888776642 4799999988632 0 011 12233344332012444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+.... .....|..+|..++.+.+. .|+....+.||++........ .. .+
T Consensus 136 sS~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-----~~----------~~ 195 (246)
T PRK05599 136 SSIAGWRAR-----RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM-----KP----------AP 195 (246)
T ss_pred eccccccCC-----cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC-----CC----------CC
Confidence 43 332111 1123466788877666542 467788889997665321110 00 00
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
. ....+|+|+.++..+..+.. .+.+.+.
T Consensus 196 ~-~~~pe~~a~~~~~~~~~~~~-~~~~~~~ 223 (246)
T PRK05599 196 M-SVYPRDVAAAVVSAITSSKR-STTLWIP 223 (246)
T ss_pred C-CCCHHHHHHHHHHHHhcCCC-CceEEeC
Confidence 0 24689999999999987543 3445554
No 272
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=92.93 E-value=0.25 Score=39.80 Aligned_cols=44 Identities=20% Similarity=0.397 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.|+.|.+++.+++++.|+||+++++.. ..++++||.++| | +++.
T Consensus 54 vD~~d~~al~~li~~~d~VIn~~p~~~---~~~i~ka~i~~g-v-~yvD 97 (389)
T COG1748 54 VDAADVDALVALIKDFDLVINAAPPFV---DLTILKACIKTG-V-DYVD 97 (389)
T ss_pred ecccChHHHHHHHhcCCEEEEeCCchh---hHHHHHHHHHhC-C-CEEE
Confidence 388999999999999999999988642 358999999999 6 4553
No 273
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.56 E-value=3.1 Score=32.26 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=72.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEE--
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFL-- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v-- 48 (191)
+|++|.+++.+..+ .+|++++.||... +-.+++++-.|.+.. --|+|
T Consensus 93 cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~I 171 (300)
T KOG1201|consen 93 CDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTI 171 (300)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEe
Confidence 47888877765542 5899999999753 123466777777654 34666
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHH-------Hh---cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAI-------EA---VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~---~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
.|..|.-.. ....+|..+|.++.-+. ++ .|++.|.+.|+..-...+.. . . ..
T Consensus 172 aS~aG~~g~-----~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~------~------~-~~ 233 (300)
T KOG1201|consen 172 ASVAGLFGP-----AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG------A------T-PF 233 (300)
T ss_pred hhhhcccCC-----ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC------C------C-CC
Confidence 344443211 11345667777665443 33 35778888877544211111 0 0 11
Q ss_pred cceeeecchhhHHHHHHHHhcCc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+.+..+-+|+-+++.+...
T Consensus 234 ~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 234 PTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred ccccCCCCHHHHHHHHHHHHHcC
Confidence 12357788999999999988754
No 274
>PRK05854 short chain dehydrogenase; Provisional
Probab=92.16 E-value=1.4 Score=34.46 Aligned_cols=96 Identities=13% Similarity=0.158 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------ccc----HHHHHHHHHHcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLD----QLKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~----~~~li~aa~~~g~vkr~v-~s 50 (191)
+|+.|.+++.++++ ..|++||+++... ..+ +..++..+++.. .|+| .|
T Consensus 72 ~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~--~riv~vs 149 (313)
T PRK05854 72 LDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR--ARVTSQS 149 (313)
T ss_pred ecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC--CCeEEEe
Confidence 48888888877654 4799999998531 011 233344444443 3444 33
Q ss_pred CcccCC-----CC---CCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccc
Q 038413 51 EFGCEE-----DR---VRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYF 98 (191)
Q Consensus 51 ~~g~~~-----~~---~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~ 98 (191)
+..... .. .....+...|..+|.....+.++ .|+....+.||.....+
T Consensus 150 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 150 SIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred chhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 321100 00 00112334577888877665432 25777889999876543
No 275
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=91.59 E-value=1.9 Score=33.70 Aligned_cols=91 Identities=10% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCCHHHHHHhhc---------cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILK---------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~---------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~vkr~v 48 (191)
|+++++++.+|.+ |-..|++++|... +.-+++++-..+++. -|+|
T Consensus 84 DVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvV 161 (322)
T KOG1610|consen 84 DVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVV 161 (322)
T ss_pred ccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEE
Confidence 8889999888854 5678899988431 122455555555554 2555
Q ss_pred -c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccc
Q 038413 49 -P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFV 99 (191)
Q Consensus 49 -~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~ 99 (191)
. |.-|.... +-..+|..+|.++|.+.. .-|++..++-||.|..+..
T Consensus 162 nvsS~~GR~~~-----p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~ 216 (322)
T KOG1610|consen 162 NVSSVLGRVAL-----PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA 216 (322)
T ss_pred EecccccCccC-----cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence 3 33442110 113467789998887743 3599999999998877643
No 276
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=91.35 E-value=2.2 Score=32.11 Aligned_cols=145 Identities=10% Similarity=0.010 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHHH----cCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKV----AGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~----~g~vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++.+ .+ -+
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~ 136 (262)
T TIGR03325 58 GDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GS 136 (262)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CC
Confidence 47888887776664 4699999987421 1123445555543 22 12
Q ss_pred EEEcCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh----c--CCCeEEEecccccccccccccCCCCCCc---eEEEe
Q 038413 46 RFLPSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----V--EIPYTFVSANCYGAYFVNVLLRPFEPHD---DVVVY 115 (191)
Q Consensus 46 r~v~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~--~~~~tilrp~~~~~~~~~~~~~~~~~~~---~~~~~ 115 (191)
.++.++ .+.. .. .....|..+|..++.+.+. . ++....+.||++......... ...... .....
T Consensus 137 iv~~sS~~~~~-~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~-~~~~~~~~~~~~~~ 210 (262)
T TIGR03325 137 VIFTISNAGFY-PN----GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKS-LGMADKSISTVPLG 210 (262)
T ss_pred EEEEeccceec-CC----CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccc-cccccccccccchh
Confidence 333333 2221 11 1123577889888877653 1 356677889987654321100 000000 00000
Q ss_pred c--CCcce-eeecchhhHHHHHHHHhcCcc--c-CCceeEeec
Q 038413 116 G--NGEAK-AVFNYEEDIAKCTIKVINDPR--T-CNRIVIYRP 152 (191)
Q Consensus 116 ~--~g~~~-~~~i~~~Dva~~~~~~l~~~~--~-~~~~~~i~~ 152 (191)
. ....+ .-+...+|+|+++..++.++. . -++.+.+.|
T Consensus 211 ~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdg 253 (262)
T TIGR03325 211 DMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDG 253 (262)
T ss_pred hhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecC
Confidence 0 00001 124568999999888877632 2 356666663
No 277
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.22 E-value=5.4 Score=30.86 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=54.5
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.+++ .++|++++.+|... + -.++.++--+++.+ =-|+| .
T Consensus 70 ~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvi 148 (282)
T KOG1205|consen 70 LDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVI 148 (282)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEE
Confidence 5899999988664 47999999998753 1 11344555555553 22555 3
Q ss_pred CC-cccCCCCCCCCCCch-hhHHHHHHHHHHHHh-------cCCCeE-EEecccccccc
Q 038413 50 SE-FGCEEDRVRPLPPFE-AYLEKKRIVRRAIEA-------VEIPYT-FVSANCYGAYF 98 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~t-ilrp~~~~~~~ 98 (191)
|| -|... .|.. -|.++|.+++.+.+. .+.... ++.||+....+
T Consensus 149 sSiaG~~~------~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~ 201 (282)
T KOG1205|consen 149 SSIAGKMP------LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEF 201 (282)
T ss_pred eccccccC------CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecc
Confidence 33 33221 2332 567899999887653 122222 47788776654
No 278
>PRK08862 short chain dehydrogenase; Provisional
Probab=91.09 E-value=3.8 Score=30.35 Aligned_cols=90 Identities=10% Similarity=0.048 Sum_probs=50.6
Q ss_pred CCCCCHHHHHHhh-------c-cCcEEEEccCCCC----c----------------cc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSIL-------K-EVDVVISTVAYPQ----F----------------LD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~-g~d~V~~~~~~~~----~----------------~~----~~~li~aa~~~g~vkr~v 48 (191)
.|+.|.+++.+++ . ..|++||+++... . .. .+.++..+++.+.-..+|
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv 140 (227)
T PRK08862 61 LKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIV 140 (227)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEE
Confidence 3778888877654 2 5799999986321 0 01 122234444432012444
Q ss_pred -cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccc
Q 038413 49 -PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAY 97 (191)
Q Consensus 49 -~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~ 97 (191)
.|+.... .+...|..+|..++.+.+. .++....+.||++..+
T Consensus 141 ~isS~~~~-------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 141 NVISHDDH-------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred EEecCCCC-------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 2432211 1133567788887766543 4788888999986654
No 279
>PLN00106 malate dehydrogenase
Probab=89.99 E-value=0.41 Score=37.75 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=34.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+.+++.++++|+|+|+++++... .+..+++++++++.+ .+.++.
T Consensus 76 ~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivi 132 (323)
T PLN00106 76 GDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVN 132 (323)
T ss_pred CCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence 34456789999999999998643 355788999999999 888663
No 280
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=89.60 E-value=0.59 Score=37.11 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
+|.+|+++|.+-.+.+.+|++|+|+...- ..++++||.++|
T Consensus 69 ~D~~n~~Sl~emak~~~vivN~vGPyR~h-GE~VVkacienG 109 (423)
T KOG2733|consen 69 ADSANEASLDEMAKQARVIVNCVGPYRFH-GEPVVKACIENG 109 (423)
T ss_pred ecCCCHHHHHHHHhhhEEEEeccccceec-CcHHHHHHHHcC
Confidence 48899999999999999999999976422 256777777777
No 281
>PLN02780 ketoreductase/ oxidoreductase
Probab=87.92 E-value=6.4 Score=30.91 Aligned_cols=59 Identities=7% Similarity=0.095 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|..+|..++.+.+. .|+..+.++||+...+.... .. . .....+.+++|+.++..+
T Consensus 206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------~~--------~--~~~~~~p~~~A~~~~~~~ 269 (320)
T PLN02780 206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------RR--------S--SFLVPSSDGYARAALRWV 269 (320)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------cC--------C--CCCCCCHHHHHHHHHHHh
Confidence 4577889888776543 58899999999865542110 00 0 111347899999999988
Q ss_pred cC
Q 038413 139 ND 140 (191)
Q Consensus 139 ~~ 140 (191)
..
T Consensus 270 ~~ 271 (320)
T PLN02780 270 GY 271 (320)
T ss_pred CC
Confidence 64
No 282
>PRK08309 short chain dehydrogenase; Provisional
Probab=87.62 E-value=1.3 Score=31.67 Aligned_cols=44 Identities=7% Similarity=0.100 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCCcccHHHHHHHHHHcCCcc----EEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQFLDQLKIVHAIKVAGNIK----RFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~~~~~~~li~aa~~~g~vk----r~v 48 (191)
+|+.|.+++.+++++ .|.+|+.+. .++..++..+|++.| |+ ||+
T Consensus 54 ~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh---~~~~~~~~~~~~~~g-v~~~~~~~~ 108 (177)
T PRK08309 54 LDYHDDDALKLAIKSTIEKNGPFDLAVAWIH---SSAKDALSVVCRELD-GSSETYRLF 108 (177)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCeEEEEecc---ccchhhHHHHHHHHc-cCCCCceEE
Confidence 489999988887753 467776544 356788999999999 99 877
No 283
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=87.23 E-value=4.7 Score=40.61 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CC-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~-~g 53 (191)
+|++|.+++.+++. +.|.|||.+|... +.+..++++++.... .+++|. || .|
T Consensus 2101 ~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~IV~~SSvag 2179 (2582)
T TIGR02813 2101 ADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKLLALFSSAAG 2179 (2582)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhh
Confidence 58999998887774 4799999998632 355678888888776 677663 44 23
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGA 96 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~ 96 (191)
... . .....|..+|.....+.+. .++....+.||++.+
T Consensus 2180 ~~G-~----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2180 FYG-N----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred cCC-C----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 211 1 1123466777666544332 246677788876543
No 284
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=85.63 E-value=1.2 Score=33.93 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred CCCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 2 ELDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 2 D~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
+..|.+++.+.++ +.|+|++++.+.......|+.+||++.| +..+
T Consensus 50 g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~-ipyl 96 (256)
T TIGR00715 50 GALDPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELG-IPYV 96 (256)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhC-CcEE
Confidence 4467788887775 6899999998877788899999999999 8654
No 285
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.25 E-value=4.7 Score=25.58 Aligned_cols=40 Identities=28% Similarity=0.312 Sum_probs=33.4
Q ss_pred HHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.++.+|.||...+..+-.....+-++|++.+ ++-+.
T Consensus 41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~-ip~~~ 80 (97)
T PF10087_consen 41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG-IPIIY 80 (97)
T ss_pred HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC-CcEEE
Confidence 47888889999999999888788889999999999 64433
No 286
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=82.85 E-value=11 Score=25.86 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=43.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEE-cCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFL-PSEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v-~s~~g 53 (191)
.|+.+.+++.++++ ..|++||+++... ......+.+++...+ -.++| .|+..
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~ 137 (167)
T PF00106_consen 59 CDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIA 137 (167)
T ss_dssp SETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchh
Confidence 47788877776653 5799999998753 122344555555533 34544 34432
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA 81 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~ 81 (191)
..... .....|..+|..++.+.+.
T Consensus 138 ~~~~~----~~~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 138 GVRGS----PGMSAYSASKAALRGLTQS 161 (167)
T ss_dssp GTSSS----TTBHHHHHHHHHHHHHHHH
T ss_pred hccCC----CCChhHHHHHHHHHHHHHH
Confidence 22111 1133566788888877653
No 287
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=82.01 E-value=2.6 Score=38.58 Aligned_cols=25 Identities=28% Similarity=0.519 Sum_probs=22.3
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~ 26 (191)
|+.|.++|.++++++|+|+++++..
T Consensus 635 Dv~D~e~L~~~v~~~DaVIsalP~~ 659 (1042)
T PLN02819 635 DVSDSESLLKYVSQVDVVISLLPAS 659 (1042)
T ss_pred ecCCHHHHHHhhcCCCEEEECCCch
Confidence 7889999999999999999998863
No 288
>PRK08303 short chain dehydrogenase; Provisional
Probab=81.89 E-value=20 Score=27.92 Aligned_cols=138 Identities=7% Similarity=-0.030 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEcc-CCC------C-----------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTV-AYP------Q-----------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~-~~~------~-----------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.++++ ..|++||++ +.. . +.+ .+.++..+++.+ --
T Consensus 74 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g 152 (305)
T PRK08303 74 VDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GG 152 (305)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-Cc
Confidence 48888888876653 479999998 521 1 001 223344444433 23
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++| .|+......... ......|..+|..+..+.+. .|+....+.||++............ +.........
T Consensus 153 ~IV~isS~~~~~~~~~-~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~ 230 (305)
T PRK08303 153 LVVEITDGTAEYNATH-YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT-EENWRDALAK 230 (305)
T ss_pred EEEEECCccccccCcC-CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC-ccchhhhhcc
Confidence 554 233211111000 01123477788887766542 4788888999987654321110000 0000000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.....-+...+|+|.+++.++.++
T Consensus 231 ~p~~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 231 EPHFAISETPRYVGRAVAALAADP 254 (305)
T ss_pred ccccccCCCHHHHHHHHHHHHcCc
Confidence 000011236899999999998876
No 289
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=81.33 E-value=3.5 Score=31.23 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 3 LDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 3 ~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
+.|.+.+.+.++ ++++|+++..+.......|+.+||++.| +..+
T Consensus 51 l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~-ipyi 96 (248)
T PRK08057 51 FGGAEGLAAYLREEGIDLVIDATHPYAAQISANAAAACRALG-IPYL 96 (248)
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhC-CcEE
Confidence 347888888885 7899999988877888899999999999 8654
No 290
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=80.94 E-value=3.2 Score=31.49 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=37.2
Q ss_pred CCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 4 DEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 4 ~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.|.+.+.+-++ +++.|+++..+.......|+.+||++.| +..+=
T Consensus 53 g~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~-ipylR 98 (249)
T PF02571_consen 53 GDEEGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG-IPYLR 98 (249)
T ss_pred CCHHHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC-cceEE
Confidence 47888888884 8999999988877788899999999999 86543
No 291
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=80.86 E-value=20 Score=26.43 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=37.9
Q ss_pred HHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccC--CceeEeec
Q 038413 76 RRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC--NRIVIYRP 152 (191)
Q Consensus 76 e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~ 152 (191)
.+.+...++..-.+.||++..+..... .+...++.....+-| -+-..+|||..+.-+..+...+ +..+.+.|
T Consensus 179 ArEla~knIrvN~VlPGFI~tpMT~~m-p~~v~~ki~~~iPmg----r~G~~EevA~~V~fLAS~~ssYiTG~t~evtG 252 (256)
T KOG1200|consen 179 ARELARKNIRVNVVLPGFIATPMTEAM-PPKVLDKILGMIPMG----RLGEAEEVANLVLFLASDASSYITGTTLEVTG 252 (256)
T ss_pred HHHHhhcCceEeEeccccccChhhhhc-CHHHHHHHHccCCcc----ccCCHHHHHHHHHHHhccccccccceeEEEec
Confidence 344555789999999998776532221 111111111111111 1224678888777766543322 66777764
No 292
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=80.54 E-value=22 Score=27.73 Aligned_cols=25 Identities=12% Similarity=0.296 Sum_probs=19.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
+|+.|.+++.++++ +.|++||+++.
T Consensus 60 ~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~ 91 (314)
T TIGR01289 60 LDLGSLDSVRQFVQQFRESGRPLDALVCNAAV 91 (314)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 48888888776653 48999999885
No 293
>PLN00015 protochlorophyllide reductase
Probab=80.35 E-value=22 Score=27.62 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=19.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
.|+.|.+++.++++ +.|++||+++.
T Consensus 54 ~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~ 85 (308)
T PLN00015 54 LDLASLDSVRQFVDNFRRSGRPLDVLVCNAAV 85 (308)
T ss_pred ecCCCHHHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 48888888877653 47999999985
No 294
>PRK05086 malate dehydrogenase; Provisional
Probab=80.06 E-value=2.8 Score=32.87 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.6
Q ss_pred HHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v 48 (191)
+++.++++++|+||.++|... ....+++++++++.+ .++++
T Consensus 61 ~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~iv 114 (312)
T PRK05086 61 EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACI 114 (312)
T ss_pred CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 455678899999999998743 235688999999998 88866
No 295
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.43 E-value=23 Score=27.58 Aligned_cols=83 Identities=8% Similarity=-0.054 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHh--------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 67 AYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
.|..+|..++.+.+. .|+....+.||++........... ...............+...+|+|++++.++
T Consensus 191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~peevA~~v~~L~ 267 (299)
T PRK06300 191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI---ERMVDYYQDWAPLPEPMEAEQVGAAAAFLV 267 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 577889888766542 278888899998765432111000 000000000000012356899999999888
Q ss_pred cCcc--cCCceeEeec
Q 038413 139 NDPR--TCNRIVIYRP 152 (191)
Q Consensus 139 ~~~~--~~~~~~~i~~ 152 (191)
..+. .-++.+.+.+
T Consensus 268 s~~~~~itG~~i~vdG 283 (299)
T PRK06300 268 SPLASAITGETLYVDH 283 (299)
T ss_pred CccccCCCCCEEEECC
Confidence 7642 2256666653
No 296
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=79.14 E-value=30 Score=27.35 Aligned_cols=130 Identities=13% Similarity=0.147 Sum_probs=67.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHHcC-Ccc---EEE--
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIK---RFL-- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vk---r~v-- 48 (191)
+|+.|.+++..++++ .|.+|+|+|..- ..++.|++.++..+- ..+ +++
T Consensus 91 ~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~v 170 (331)
T KOG1210|consen 91 VDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILV 170 (331)
T ss_pred cccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEe
Confidence 466777777666542 599999998641 345666666544321 112 444
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHH-------HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKR-------IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~-------~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|..+.-.-.+ .+.|..+|. +.++.+...++..|...|+.+..++...--. .+-....+...+
T Consensus 171 sS~~a~~~i~G-----ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~--tkP~~t~ii~g~--- 240 (331)
T KOG1210|consen 171 SSQLAMLGIYG-----YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK--TKPEETKIIEGG--- 240 (331)
T ss_pred hhhhhhcCccc-----ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc--cCchheeeecCC---
Confidence 23322110000 112222332 3345555568888888888877764432100 011112222222
Q ss_pred eeecchhhHHHHHHHHhcC
Q 038413 122 AVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~ 140 (191)
.+.+..+++|..++.-+..
T Consensus 241 ss~~~~e~~a~~~~~~~~r 259 (331)
T KOG1210|consen 241 SSVIKCEEMAKAIVKGMKR 259 (331)
T ss_pred CCCcCHHHHHHHHHhHHhh
Confidence 2447789999998887765
No 297
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=78.05 E-value=27 Score=26.33 Aligned_cols=101 Identities=12% Similarity=0.174 Sum_probs=62.4
Q ss_pred HHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHH-HHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCC
Q 038413 31 QLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLE-KKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPH 109 (191)
Q Consensus 31 ~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~-~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~ 109 (191)
...+++|+++.| +||+-. ..||.. -...+.+++++.|++.+.++- |..
T Consensus 108 ~~A~~~AL~alg-~~RIal---------------vTPY~~~v~~~~~~~l~~~G~eV~~~~~--~~~------------- 156 (239)
T TIGR02990 108 SSAAVDGLAALG-VRRISL---------------LTPYTPETSRPMAQYFAVRGFEIVNFTC--LGL------------- 156 (239)
T ss_pred HHHHHHHHHHcC-CCEEEE---------------ECCCcHHHHHHHHHHHHhCCcEEeeeec--cCC-------------
Confidence 456666666666 666532 112222 245566778888888777652 100
Q ss_pred ceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 110 DDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 110 ~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
..+..+.-++.+.+.+++.++ ..+. -..++++ .-.+...++++.+++.+|+|+
T Consensus 157 -------~~~~~ia~i~p~~i~~~~~~~-~~~~--aDAifis--CTnLrt~~vi~~lE~~lGkPV 209 (239)
T TIGR02990 157 -------TDDREMARISPDCIVEAALAA-FDPD--ADALFLS--CTALRAATCAQRIEQAIGKPV 209 (239)
T ss_pred -------CCCceeeecCHHHHHHHHHHh-cCCC--CCEEEEe--CCCchhHHHHHHHHHHHCCCE
Confidence 011123346677777777666 3333 2556665 468999999999999999995
No 298
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=76.38 E-value=11 Score=28.79 Aligned_cols=56 Identities=25% Similarity=0.329 Sum_probs=36.3
Q ss_pred ccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecc
Q 038413 29 LDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSAN 92 (191)
Q Consensus 29 ~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~ 92 (191)
.....++.+|++-| .+.||.-+|..+.. .......+..+++.+.+.|++|+....+
T Consensus 117 ~~G~~i~~~Ak~mG-AktFVh~sfprhms-------~~~l~~Rr~~M~~~C~~lGi~fv~~taP 172 (275)
T PF12683_consen 117 SRGYTIVWAAKKMG-AKTFVHYSFPRHMS-------YELLARRRDIMEEACKDLGIKFVEVTAP 172 (275)
T ss_dssp HHHHHHHHHHHHTT--S-EEEEEETTGGG-------SHHHHHHHHHHHHHHHHCT--EEEEEE-
T ss_pred hccHHHHHHHHHcC-CceEEEEechhhcc-------hHHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 34688999999999 99999655543321 1123456678899999999999987643
No 299
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=74.25 E-value=5.2 Score=31.71 Aligned_cols=39 Identities=21% Similarity=0.165 Sum_probs=27.5
Q ss_pred CCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 3 LDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 3 ~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
+.+++.+.+.+.++++|++|+++.. .....|++||.++|
T Consensus 59 ~~~p~~~~~~~~~~~VVlncvGPyt-~~g~plv~aC~~~G 97 (382)
T COG3268 59 LGVPAALEAMASRTQVVLNCVGPYT-RYGEPLVAACAAAG 97 (382)
T ss_pred CCCHHHHHHHHhcceEEEecccccc-ccccHHHHHHHHhC
Confidence 3457788888899999999999753 22344556666555
No 300
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=73.37 E-value=4.2 Score=32.11 Aligned_cols=22 Identities=32% Similarity=0.371 Sum_probs=18.2
Q ss_pred HHHHHHhhccCcEEEEccCCCC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ 27 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~ 27 (191)
..++.++++|+|+|||+++...
T Consensus 69 ~~~~~~~l~~aDiVI~tAG~~~ 90 (325)
T cd01336 69 TTDPEEAFKDVDVAILVGAMPR 90 (325)
T ss_pred cCCHHHHhCCCCEEEEeCCcCC
Confidence 4567788999999999999753
No 301
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=72.49 E-value=6 Score=30.02 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=37.1
Q ss_pred CCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 4 DEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 4 ~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.+.+.|.+-++ ++|.|+.+..+.......|.+++|+..| +..+-+
T Consensus 53 l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~g-ipy~r~ 99 (257)
T COG2099 53 LGAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETG-IPYLRL 99 (257)
T ss_pred CCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence 45677777775 8999999888777788899999999999 887653
No 302
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=70.48 E-value=15 Score=24.91 Aligned_cols=44 Identities=20% Similarity=0.058 Sum_probs=31.7
Q ss_pred CHHHHHHhhc--cCcEEEEccCCCC-----------------cccHHHHHHHHHHcCCccEEEc
Q 038413 5 EHEKIVSILK--EVDVVISTVAYPQ-----------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 5 d~~~l~~a~~--g~d~V~~~~~~~~-----------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|++.+.+.++ ++|.|...+.-.+ .+....+++||++.| ++-++.
T Consensus 1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~G-irv~ay 63 (132)
T PF14871_consen 1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERG-IRVPAY 63 (132)
T ss_pred CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCC-CEEEEE
Confidence 5677777775 7888887664211 245688999999999 987663
No 303
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=68.47 E-value=45 Score=25.16 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=21.9
Q ss_pred CCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc
Q 038413 63 PPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA 96 (191)
Q Consensus 63 ~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~ 96 (191)
.+...|--+|.++....++ .++-.+.|+|||...
T Consensus 166 ~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T 206 (249)
T KOG1611|consen 166 GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT 206 (249)
T ss_pred cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence 3455666788888777664 244467788886443
No 304
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=66.09 E-value=46 Score=26.24 Aligned_cols=57 Identities=14% Similarity=-0.006 Sum_probs=42.1
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHh-CCceEEEEcCHHHH
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT-GRSFKRVHISEEEL 184 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~-g~~~~~~~~~~~~~ 184 (191)
.+..+--+++.++..+-+. |-.+.+. .+.+.+.|+++.+.+.+ +.|+-..++|-|-.
T Consensus 219 mdp~n~~eAlre~~~D~~E-GAD~lMV--KPal~YLDIi~~~k~~~~~~PvaaYqVSGEYa 276 (320)
T cd04824 219 LPPGARGLALRAVERDVSE-GADMIMV--KPGTPYLDIVREAKDKHPDLPLAVYHVSGEYA 276 (320)
T ss_pred CCCcCHHHHHHHHHhhHHh-CCCEEEE--cCCchHHHHHHHHHHhccCCCEEEEEccHHHH
Confidence 4555555677777666443 3344443 68999999999999999 89988888987754
No 305
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=64.32 E-value=14 Score=24.55 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=34.2
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCccc
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGC 54 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~ 54 (191)
|++|+. .+..+|+|.||+.-+++ +.+..+++.+++-| ..-++-.-.|.
T Consensus 59 DitnP~--~~iY~~A~lIYSiRppp--El~~~ildva~aVg-a~l~I~pL~Ge 106 (129)
T COG1255 59 DITNPN--ISIYEGADLIYSIRPPP--ELQSAILDVAKAVG-APLYIKPLTGE 106 (129)
T ss_pred cCCCcc--HHHhhCccceeecCCCH--HHHHHHHHHHHhhC-CCEEEEecCCC
Confidence 455555 24467899999876654 77789999999999 88777433343
No 306
>COG4588 AcfC Accessory colonization factor AcfC, contains ABC-type periplasmic domain [General function prediction only]
Probab=63.59 E-value=21 Score=26.35 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=35.1
Q ss_pred cCCceeEeec-CCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 143 TCNRIVIYRP-QTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 143 ~~~~~~~i~~-~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
..+..+++.| |++..-..+++..+++.+|+++.+..=|...|.++.+
T Consensus 18 ~~~adinlYGpGGPhtaL~~vA~~~~ektg~kVnvt~GPq~tW~~kAk 65 (252)
T COG4588 18 AANADINLYGPGGPHTALKDVAKKYEEKTGIKVNVTAGPQATWNEKAK 65 (252)
T ss_pred hhcceEEEecCCCCcHHHHHHHHHHHHHhCeEEEEecCCcchhhhhhh
Confidence 4456666655 3577888999999999999998888777777765543
No 307
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=63.01 E-value=64 Score=24.38 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEe
Q 038413 68 YLEKKRIVRRAIEAVEIPYTFVS 90 (191)
Q Consensus 68 ~~~~k~~~e~~l~~~~~~~tilr 90 (191)
.|.+-++--+.|++.|++|.++.
T Consensus 88 iYgA~~EQm~~L~~~gI~yevvP 110 (254)
T COG2875 88 IYGALAEQMRELEALGIPYEVVP 110 (254)
T ss_pred HHHHHHHHHHHHHHcCCCeEEeC
Confidence 46666666678888999998873
No 308
>PF02608 Bmp: Basic membrane protein; InterPro: IPR003760 This is a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. All of these proteins are outer membrane proteins and are thus antigenic in nature when possessed by the pathogenic members of the family []. The Bacillus subtilis degR, a positive regulator of the production of degradative enzymes, is also a member of this group [].; GO: 0005886 plasma membrane; PDB: 2HQB_A 3S99_A 2FQW_A 2FQY_A 2FQX_A.
Probab=60.03 E-value=21 Score=27.85 Aligned_cols=40 Identities=23% Similarity=0.366 Sum_probs=25.9
Q ss_pred CCCCCHHHHH---Hhh--ccCcEEEEccCCCCcccHHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIV---SIL--KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~---~a~--~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vk 45 (191)
|++.|++.-. +.+ +|+|+|+++++.. ...++++|++.| ..
T Consensus 169 gs~~D~~~~~~~a~~li~~GaDvI~~~ag~~----~~gv~~aa~e~g-~~ 213 (306)
T PF02608_consen 169 GSFNDPAKAKEAAEALIDQGADVIFPVAGGS----GQGVIQAAKEAG-VY 213 (306)
T ss_dssp SSSS-HHHHHHHHHHHHHTT-SEEEEE-CCC----HHHHHHHHHHHT-HE
T ss_pred CCcCchHHHHHHHHHHhhcCCeEEEECCCCC----chHHHHHHHHcC-Cc
Confidence 4566655433 223 5999999988843 466999999999 76
No 309
>PRK08223 hypothetical protein; Validated
Probab=59.55 E-value=21 Score=27.76 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=30.8
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.+.+.+.++++|+|+.+......+....+-++|++.+ +..+..+.
T Consensus 108 ~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~-iP~V~~~~ 152 (287)
T PRK08223 108 KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG-IPALTAAP 152 (287)
T ss_pred ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC-CCEEEEec
Confidence 4456677889999998775433344566778999999 65554333
No 310
>PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown.; PDB: 2K4M_A.
Probab=59.47 E-value=23 Score=23.87 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=28.9
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
|+.+++ .+..+|+|.||+.-.+. +.+..+++.|++.| ..-+|
T Consensus 59 Dif~P~--l~iY~~a~lIYSiRPP~--El~~~il~lA~~v~-adlii 100 (127)
T PF03686_consen 59 DIFNPN--LEIYEGADLIYSIRPPP--ELQPPILELAKKVG-ADLII 100 (127)
T ss_dssp -SSS----HHHHTTEEEEEEES--T--TSHHHHHHHHHHHT--EEEE
T ss_pred cccCCC--HHHhcCCcEEEEeCCCh--HHhHHHHHHHHHhC-CCEEE
Confidence 566666 24568999999976644 77899999999999 77766
No 311
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=59.21 E-value=85 Score=24.55 Aligned_cols=82 Identities=9% Similarity=-0.013 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHh--------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-eeecchhhHHHHHHHH
Q 038413 67 AYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AVFNYEEDIAKCTIKV 137 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~ 137 (191)
.|..+|..++.+.+. .|+....+.||++........... . ....... ...+ .-+...+|+|.+++.+
T Consensus 192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~--~-~~~~~~~-~~~pl~r~~~peevA~~~~fL 267 (303)
T PLN02730 192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI--D-DMIEYSY-ANAPLQKELTADEVGNAAAFL 267 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc--H-HHHHHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence 577889888876542 367778889997765432211000 0 0000000 0001 1245789999999998
Q ss_pred hcCcc-c-CCceeEeec
Q 038413 138 INDPR-T-CNRIVIYRP 152 (191)
Q Consensus 138 l~~~~-~-~~~~~~i~~ 152 (191)
+.... . -++.+.+.+
T Consensus 268 aS~~a~~itG~~l~vdG 284 (303)
T PLN02730 268 ASPLASAITGATIYVDN 284 (303)
T ss_pred hCccccCccCCEEEECC
Confidence 87542 2 356666653
No 312
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=59.06 E-value=56 Score=25.77 Aligned_cols=57 Identities=12% Similarity=0.012 Sum_probs=42.6
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
.+..+--+++.++..+-+. |-.+.+. .+.+.+.|+++.+.+.++.|+--.++|-|-.
T Consensus 219 mdp~n~~eAlre~~~Di~E-GAD~lMV--KPal~YLDIi~~~k~~~~lPvaaYqVSGEYa 275 (320)
T cd04823 219 MDPANSREALREVALDIAE-GADMVMV--KPGMPYLDIIRRVKDEFGVPTFAYQVSGEYA 275 (320)
T ss_pred CCCCCHHHHHHHHHhhHHh-CCCEEEE--cCCchHHHHHHHHHHhcCCCEEEEEccHHHH
Confidence 4556666777777766443 3444443 6899999999999999999988889988754
No 313
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=58.13 E-value=27 Score=25.95 Aligned_cols=46 Identities=15% Similarity=0.316 Sum_probs=32.4
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHH-HHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVH-AIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~-aa~~~g~vkr~v~ 49 (191)
||-+|++.|.+| +.++|+++.+.+.. ....-+.. |++..| +++++.
T Consensus 51 gd~t~~~~L~~agi~~aD~vva~t~~d--~~N~i~~~la~~~~g-v~~via 98 (225)
T COG0569 51 GDATDEDVLEEAGIDDADAVVAATGND--EVNSVLALLALKEFG-VPRVIA 98 (225)
T ss_pred ecCCCHHHHHhcCCCcCCEEEEeeCCC--HHHHHHHHHHHHhcC-CCcEEE
Confidence 578899999999 68999999987743 22222333 344478 999874
No 314
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=57.17 E-value=14 Score=29.29 Aligned_cols=34 Identities=24% Similarity=0.178 Sum_probs=24.8
Q ss_pred HHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHc
Q 038413 8 KIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVA 41 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~ 41 (191)
...++++|+|+|+++++.+. ....+.+....++.
T Consensus 69 ~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 69 DPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred ChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 45678999999999998753 23356667777666
No 315
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=56.93 E-value=21 Score=24.45 Aligned_cols=55 Identities=20% Similarity=0.127 Sum_probs=42.1
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC---CceEEEEcCHHHHHHHhh
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG---RSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g---~~~~~~~~~~~~~~~~~~ 189 (191)
-+++..+++..| .=.+.++ ++.+|..|+-+++++..+ .+-+++.++++++.+.+.
T Consensus 62 ~~~lgl~~l~~f-----------~W~lalG--d~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~ 119 (141)
T PF12419_consen 62 QSFLGLDQLLDF-----------DWELALG--DEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALA 119 (141)
T ss_pred CCccChHHHhcc-----------eEEEEEC--CEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHH
Confidence 466777765542 2335565 799999999999999888 378899999999987764
No 316
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=56.29 E-value=52 Score=25.89 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=42.5
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
.+..+--+++.++..+-+. |-.+.+. .+.+.+.|+++.+.+.++.|+--.++|-|-.
T Consensus 214 mdpan~~eAlre~~~D~~E-GAD~lMV--KPal~YLDIi~~~k~~~~~PvaaYqVSGEYa 270 (314)
T cd00384 214 MDPANRREALREVELDIEE-GADILMV--KPALAYLDIIRDVRERFDLPVAAYNVSGEYA 270 (314)
T ss_pred CCCCCHHHHHHHHHhhHHh-CCCEEEE--cCCchHHHHHHHHHHhcCCCEEEEEccHHHH
Confidence 4555666777777766443 3344443 6899999999999999999988889988754
No 317
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=54.92 E-value=33 Score=25.89 Aligned_cols=140 Identities=10% Similarity=0.050 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEE---cCCccc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFL---PSEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v---~s~~g~ 54 (191)
.|+++..++.++|+ ..|++|+-++..+ +.++...++.+.+. |.--=+| .|.+|.
T Consensus 62 ~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 62 CDVTNRGDLEAAFDKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL 141 (261)
T ss_pred eccccHHHHHHHHHHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence 37888888888875 4699999988653 34456677777653 2011133 355676
Q ss_pred CCCCCCCCCCchh-hHHHHH---------HHHHHHHhcCCCeEEEecccccccccccccC----CCCCCceEEEecCCcc
Q 038413 55 EEDRVRPLPPFEA-YLEKKR---------IVRRAIEAVEIPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGEA 120 (191)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~k~---------~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~ 120 (191)
++. |..| |.++|. +-..+...+|+....++||+.......++.. +.......... .
T Consensus 142 ~P~------p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l----~ 211 (261)
T KOG4169|consen 142 DPM------PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEAL----E 211 (261)
T ss_pred Ccc------ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHH----H
Confidence 432 2223 334443 3355666789999999999876654444311 11000000000 0
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
..+--+..+++..++.+++.+. -+..+.+.
T Consensus 212 ~~~~q~~~~~a~~~v~aiE~~~-NGaiw~v~ 241 (261)
T KOG4169|consen 212 RAPKQSPACCAINIVNAIEYPK-NGAIWKVD 241 (261)
T ss_pred HcccCCHHHHHHHHHHHHhhcc-CCcEEEEe
Confidence 1122256788999999999864 24555555
No 318
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=54.15 E-value=17 Score=22.18 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=9.9
Q ss_pred eEeecCCCccCHHHHHHHHHH
Q 038413 148 VIYRPQTNIISQLELISLWEQ 168 (191)
Q Consensus 148 ~~i~~~~~~~t~~e~~~~~~~ 168 (191)
|+.|+ .+.+|..+|++.+.+
T Consensus 39 FhTCS-ae~m~a~eLv~FL~~ 58 (78)
T PF10678_consen 39 FHTCS-AEGMTADELVDFLEE 58 (78)
T ss_pred EEecC-CCCCCHHHHHHHHHH
Confidence 44443 455555555555443
No 319
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=53.66 E-value=21 Score=23.68 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=26.9
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+++.+++..+|+++.+..+ +.....++.|.++| +.-++
T Consensus 59 ~~l~~~~~~~DVvIDfT~p---~~~~~~~~~~~~~g-~~~Vi 96 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNP---DAVYDNLEYALKHG-VPLVI 96 (124)
T ss_dssp S-HHHHTTH-SEEEEES-H---HHHHHHHHHHHHHT--EEEE
T ss_pred hhHHHhcccCCEEEEcCCh---HHhHHHHHHHHhCC-CCEEE
Confidence 5677888889999998743 66677889999999 65555
No 320
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=53.63 E-value=84 Score=23.52 Aligned_cols=46 Identities=7% Similarity=0.146 Sum_probs=29.5
Q ss_pred CCCCHHHHHHhhc---cCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILK---EVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~---g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v 48 (191)
++.+-+.|.++++ .-+.-+|++|... .+-...|++.|++.| |+++.
T Consensus 9 ~~~~n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~g-v~~V~ 64 (223)
T PF06415_consen 9 SFFKNPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQG-VKKVY 64 (223)
T ss_dssp GGGTSHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT--SEEE
T ss_pred CcccCHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcC-CCEEE
Confidence 4455566666664 3345678777532 456788999999999 99864
No 321
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=53.44 E-value=20 Score=21.83 Aligned_cols=23 Identities=22% Similarity=0.118 Sum_probs=11.2
Q ss_pred CccCHHHHHHHHHHHhCCceEEE
Q 038413 155 NIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 155 ~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
+++|-.+|.+.+.+..|...++.
T Consensus 16 ~~~t~~~L~~~i~~~FG~~arFh 38 (77)
T TIGR03853 16 EPYTRESLKAAIEQKFGEDARFH 38 (77)
T ss_pred CCcCHHHHHHHHHHHhCCCceEe
Confidence 44455555555555555444443
No 322
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=52.92 E-value=15 Score=27.24 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=30.7
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCC
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEED 57 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~ 57 (191)
..+.+|+...+.-+-=++....+....|++.|.++| |+++++-.|+.-.+
T Consensus 167 ~avA~aca~~g~~lEPTGGIdl~Nf~~I~~i~ldaG-v~kviPHIYssiID 216 (236)
T TIGR03581 167 AAVAKACAKHGFYLEPTGGIDLDNFEEIVQIALDAG-VEKVIPHVYSSIID 216 (236)
T ss_pred HHHHHHHHHcCCccCCCCCccHHhHHHHHHHHHHcC-CCeeccccceeccc
Confidence 345555554443222222223556788999999999 99999766654443
No 323
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=52.11 E-value=50 Score=21.15 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=30.5
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
||..|++.|.++ ++.++.|+.+.... .....++..+++.+...+++
T Consensus 47 gd~~~~~~l~~a~i~~a~~vv~~~~~d--~~n~~~~~~~r~~~~~~~ii 93 (116)
T PF02254_consen 47 GDATDPEVLERAGIEKADAVVILTDDD--EENLLIALLARELNPDIRII 93 (116)
T ss_dssp S-TTSHHHHHHTTGGCESEEEEESSSH--HHHHHHHHHHHHHTTTSEEE
T ss_pred ccchhhhHHhhcCccccCEEEEccCCH--HHHHHHHHHHHHHCCCCeEE
Confidence 788999999887 47899999887632 44455666777643144554
No 324
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.98 E-value=1.2e+02 Score=24.00 Aligned_cols=100 Identities=13% Similarity=0.049 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHHcCCccEEE-cCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKVAGNIKRFL-PSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~~g~vkr~v-~s~ 51 (191)
.|+.|.+++.+... ..|+.|+.||... ..-+..+++.++++. -.|+| .||
T Consensus 93 lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS 171 (314)
T KOG1208|consen 93 LDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSS 171 (314)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcC
Confidence 48888888876643 4699999988642 122567888888876 45655 454
Q ss_pred ccc----CCCCC-CC----CCCchhhHHHHHHHHHHHHh------cCCCeEEEeccccccccccc
Q 038413 52 FGC----EEDRV-RP----LPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNV 101 (191)
Q Consensus 52 ~g~----~~~~~-~~----~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~ 101 (191)
... +...- +. ......|..+|.+...+..+ .|+....+.||....+.+.+
T Consensus 172 ~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 172 ILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred ccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence 321 11110 00 11122256677665444332 26888889999888774333
No 325
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=50.59 E-value=39 Score=22.58 Aligned_cols=40 Identities=30% Similarity=0.463 Sum_probs=28.7
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.+.+.+.++++|+||++... ......+-+.|++.+ + .++.
T Consensus 83 ~~~~~~~~~~~d~vi~~~d~--~~~~~~l~~~~~~~~-~-p~i~ 122 (135)
T PF00899_consen 83 EENIEELLKDYDIVIDCVDS--LAARLLLNEICREYG-I-PFID 122 (135)
T ss_dssp HHHHHHHHHTSSEEEEESSS--HHHHHHHHHHHHHTT---EEEE
T ss_pred cccccccccCCCEEEEecCC--HHHHHHHHHHHHHcC-C-CEEE
Confidence 45667778899999998764 344566778999998 5 4553
No 326
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=49.61 E-value=1.2e+02 Score=23.95 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=43.6
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
..+..+.-+++.++..+-+..-..+-+ ...+.+.|++..+.+.++.|+--.++|-|-.
T Consensus 226 QmDpaN~~EAlrE~~lD~~EGAD~lMV---KPal~YLDIi~~vk~~~~lP~~AYqVSGEYa 283 (330)
T COG0113 226 QMDPANRREALREIELDIEEGADILMV---KPALPYLDIIRRVKEEFNLPVAAYQVSGEYA 283 (330)
T ss_pred ccCCcCHHHHHHHHHhhHhcCCcEEEE---cCCchHHHHHHHHHHhcCCCeEEEecchHHH
Confidence 356666777788877765433344444 6899999999999999999988888887754
No 327
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed
Probab=49.20 E-value=73 Score=26.03 Aligned_cols=96 Identities=7% Similarity=-0.025 Sum_probs=49.7
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCC-cce-eeecchhhHHHHHHHHhcCcccCCceeE
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-EAK-AVFNYEEDIAKCTIKVINDPRTCNRIVI 149 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~ 149 (191)
-.++-+.|++.|++.-++|+..+.-+....+.......+.+.+.... +.. ..+. ..||..++...-..|.-.+-++-
T Consensus 276 ~keav~~LR~~G~kVGllri~~~rPFP~~~i~~~l~~~k~ViVvE~n~s~g~~g~l-~~dV~aal~~~~~~~~v~~~~~g 354 (394)
T PRK08367 276 LKEFVDKLREEGYKVGAAKLTVYRPFPVEEIRALAKKAKVLAFLEKNISFGLGGAV-FADASAALVNESEKPKILDFIIG 354 (394)
T ss_pred HHHHHHHHHhcCCcceeEEEeEecCCCHHHHHHHHccCCEEEEEeCCCCCCCCCcH-HHHHHHHHhccCCCCeEEEEEeC
Confidence 34444567778998888887765543222121111123344444311 100 1122 55666655432222322233333
Q ss_pred eecCCCccCHHHHHHHHHHHh
Q 038413 150 YRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~ 170 (191)
++ +..+|..++.+++.+..
T Consensus 355 lg--g~~~~~~~~~~~~~~~~ 373 (394)
T PRK08367 355 LG--GRDVTFKQLDEALEIAE 373 (394)
T ss_pred CC--CCCCCHHHHHHHHHHHH
Confidence 43 79999999999998754
No 328
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=49.05 E-value=53 Score=19.21 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=31.3
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
...+|..+|+++.+.. .+ .-+++..-+ ++.+|-.=+.+++.+.-.
T Consensus 16 ~s~YiTL~di~~lV~~----g~-~~~V~D~kt-geDiT~~iL~QIi~e~e~ 60 (64)
T PF07879_consen 16 TSSYITLEDIAQLVRE----GE-DFKVVDAKT-GEDITRSILLQIILEEES 60 (64)
T ss_pred CceeEeHHHHHHHHHC----CC-eEEEEECCC-CcccHHHHHHHHHHHHHh
Confidence 3579999999987654 11 123444443 799999999999987643
No 329
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=48.86 E-value=63 Score=25.57 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=45.3
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
|+.+.=..+..+--+++.++..+-+. |-.+.+. .+.+++.|+++.+.+.++.|+--.++|-|-.
T Consensus 215 gDrktYQmdp~n~~eAlre~~~D~~E-GAD~lMV--KPal~YLDIi~~~k~~~~~PvaaYqVSGEYa 278 (323)
T PRK09283 215 GDRKTYQMDPANRREALREVALDIEE-GADMVMV--KPALPYLDIIRRVKDEFNLPVAAYQVSGEYA 278 (323)
T ss_pred CCccccCCCCCCHHHHHHHHHhhHHh-CCCEEEE--cCCchHHHHHHHHHhcCCCCEEEEEccHHHH
Confidence 34333335566666777777776443 3344443 6899999999999999999988888987754
No 330
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=48.77 E-value=26 Score=26.91 Aligned_cols=19 Identities=11% Similarity=0.272 Sum_probs=13.3
Q ss_pred HHHHhhccCcEEEEccCCC
Q 038413 8 KIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~ 26 (191)
++++.+.++|+|+-+++..
T Consensus 60 ~~eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 60 PLDQLATHADIVVEAAPAS 78 (271)
T ss_pred CHHHHhcCCCEEEECCCcH
Confidence 3445567889999987753
No 331
>PRK04148 hypothetical protein; Provisional
Probab=48.68 E-value=44 Score=22.78 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=26.4
Q ss_pred hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 13 LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
-+++|.||.+-.+. +.+..+++.|++-| +.-+|.
T Consensus 75 y~~a~liysirpp~--el~~~~~~la~~~~-~~~~i~ 108 (134)
T PRK04148 75 YKNAKLIYSIRPPR--DLQPFILELAKKIN-VPLIIK 108 (134)
T ss_pred HhcCCEEEEeCCCH--HHHHHHHHHHHHcC-CCEEEE
Confidence 45788888765543 77899999999999 877763
No 332
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=48.44 E-value=81 Score=24.94 Aligned_cols=64 Identities=14% Similarity=0.112 Sum_probs=45.7
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
|+.+.=..+..+--+++.++..+-+..-..+-+ .+.+.+.|+++.+.+.++.|+-..++|-|-.
T Consensus 216 gDrksYQmdp~n~~eAlre~~~D~~EGAD~lMV---KPal~YLDIi~~~k~~~~lPvaaYqVSGEYa 279 (322)
T PRK13384 216 GDRKSYQLDYANGRQALLEALLDEAEGADILMV---KPGTPYLDVLSRLRQETHLPLAAYQVGGEYA 279 (322)
T ss_pred CCcccccCCCCCHHHHHHHHHhhHhhCCCEEEE---cCCchHHHHHHHHHhccCCCEEEEEchHHHH
Confidence 343333355666667777777775443344444 6899999999999999999988888987754
No 333
>PRK14851 hypothetical protein; Provisional
Probab=48.41 E-value=46 Score=29.38 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=31.7
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+.+.+.+.++++|+|+.+......+.-..+.++|++.+ +.-+.
T Consensus 123 ~~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~-iP~i~ 165 (679)
T PRK14851 123 NADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG-IPVIT 165 (679)
T ss_pred ChHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC-CCEEE
Confidence 35667778899999999876544445567888999998 76543
No 334
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=48.15 E-value=18 Score=25.94 Aligned_cols=24 Identities=25% Similarity=0.278 Sum_probs=17.3
Q ss_pred CCCCHHHHHHhhccCcEEEEccCC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAY 25 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~ 25 (191)
|..+.+++.++++++|+||++.+.
T Consensus 84 ~~~~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 84 ETSDDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred eCCCHHHHHHHHhcCCEEEECCCC
Confidence 455667777788888888887654
No 335
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=48.06 E-value=51 Score=23.97 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=28.2
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+.++++|+||.+... ......+-++|++.+ +..+.
T Consensus 102 ~~~~~~~~~~~D~Vi~~~d~--~~~r~~l~~~~~~~~-ip~i~ 141 (202)
T TIGR02356 102 AENLELLINNVDLVLDCTDN--FATRYLINDACVALG-TPLIS 141 (202)
T ss_pred HHHHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEE
Confidence 34566778899999998753 344455778889988 65444
No 336
>PRK14852 hypothetical protein; Provisional
Probab=47.35 E-value=45 Score=30.67 Aligned_cols=43 Identities=19% Similarity=0.277 Sum_probs=33.0
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+.+.+.+.++++|+|+.+......+....+.++|.+.| +.-+-
T Consensus 412 ~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~-IP~I~ 454 (989)
T PRK14852 412 AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELG-IPVIT 454 (989)
T ss_pred CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcC-CCEEE
Confidence 45667777899999999887655556677888999988 66554
No 337
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=46.87 E-value=24 Score=27.88 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=24.1
Q ss_pred HHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHc
Q 038413 8 KIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVA 41 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~ 41 (191)
...++++++|+|+++++.+. ....+.+..+.+++
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 34578999999999998753 22346666777666
No 338
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=46.81 E-value=95 Score=24.56 Aligned_cols=75 Identities=21% Similarity=0.344 Sum_probs=40.1
Q ss_pred HHhhccCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEE--cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHhcC
Q 038413 10 VSILKEVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFL--PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVE 83 (191)
Q Consensus 10 ~~a~~g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v--~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~ 83 (191)
.+-.+|.|+.+.-....+ +....-+++||++++ .+++. ..-||..... ....+..|. .+ ..+-+.|...|
T Consensus 46 ~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~k~as-A~~It~ViPY~gYARQD-k~~~~repI-sa-klvA~lL~~aG 121 (314)
T COG0462 46 EESVRGKDVFIIQSTSPPVNDNLMELLIMIDALKRAS-AKRITAVIPYFGYARQD-KAFKPREPI-SA-KLVANLLETAG 121 (314)
T ss_pred cccccCCeEEEEeCCCCCcCHHHHHHHHHHHHHHhcC-CceEEEEeecchhhccC-cccCCCCCE-eH-HHHHHHHHHcC
Confidence 344567787765443332 344577899999999 88854 2233332221 000122222 22 34456676678
Q ss_pred CCeEE
Q 038413 84 IPYTF 88 (191)
Q Consensus 84 ~~~ti 88 (191)
.+..+
T Consensus 122 ~drv~ 126 (314)
T COG0462 122 ADRVL 126 (314)
T ss_pred CCeEE
Confidence 77544
No 339
>PRK15452 putative protease; Provisional
Probab=46.15 E-value=54 Score=27.28 Aligned_cols=44 Identities=9% Similarity=0.042 Sum_probs=29.6
Q ss_pred CCHHHHHHhhc-cCcEEEEccCCC---------CcccHHHHHHHHHHcCCccEEE
Q 038413 4 DEHEKIVSILK-EVDVVISTVAYP---------QFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 4 ~d~~~l~~a~~-g~d~V~~~~~~~---------~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+..|+. |+|+||.-.... ..+.....++.|++.| +|-++
T Consensus 11 g~~e~l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g-~kvyv 64 (443)
T PRK15452 11 GTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALG-KKFYV 64 (443)
T ss_pred CCHHHHHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcC-CEEEE
Confidence 46788888885 999999833211 1233456677777888 77665
No 340
>TIGR02649 true_RNase_BN ribonuclease BN. Members of this protein family are ribonuclease BN of Escherichia coli K-12 and closely related proteins believed to be equivalent in function. Note that E. coli appears to lack RNase Z per se, and this protein of E. coli appears orthologous to (but not functionally equivalent to) RNase Z of Bacillus subtilis and various other species. Meanwhile, the yihY gene product of E. coli previously was incorrectly identified as RNase BN.
Probab=44.98 E-value=77 Score=24.57 Aligned_cols=44 Identities=14% Similarity=0.254 Sum_probs=31.5
Q ss_pred HHHHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEcC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~s 50 (191)
.+.+.+.++|+|.+||=+.... -....-.++.|++++ +|++++.
T Consensus 214 ~~~~~~~~~~adlLi~Eat~~~~~~~~a~~~~H~t~~~a~~~a~~~~-~k~lvL~ 267 (303)
T TIGR02649 214 CDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAG-VGKLIIT 267 (303)
T ss_pred hHHHHHHhcCCCEEEEeccCChhhHHHHhhcCCCCHHHHHHHHHHcC-CCEEEEE
Confidence 4566777899999999777532 112355677788889 9998853
No 341
>PF05157 T2SE_Nter: Type II secretion system (T2SS), protein E, N-terminal domain; InterPro: IPR007831 This domain is found at the N terminus of members of the general secretory system II protein E. Proteins in this subfamily are typically involved in Type IV pilus biogenesis (e.g. Q9X4G8 from SWISSPROT), though some are involved in other processes; for instance aggregation in Myxococcus xanthus (e.g. Q9RF11 from SWISSPROT) [].; GO: 0005524 ATP binding, 0006810 transport; PDB: 2D27_A 2D28_C.
Probab=44.75 E-value=70 Score=20.05 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=23.8
Q ss_pred CCccCHHHHHHHHHHHhCC-ceEEEEcCHHHHHHHhhh
Q 038413 154 TNIISQLELISLWEQKTGR-SFKRVHISEEELVKLSQI 190 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 190 (191)
.++.+ .+..+.+...+|. +++++-.+.+++.+.+..
T Consensus 65 ~dP~~-~~~~~~l~~~~~~~~i~~~la~~~~i~~~l~~ 101 (109)
T PF05157_consen 65 ADPLD-PEALDELEFLLGKYPIEFVLATREDIDQLLER 101 (109)
T ss_dssp S-TT--HHHHHHHHHHH-S--EEEEE--HHHHHHHHHH
T ss_pred cCCCC-HHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHH
Confidence 35544 7888888888888 888888888888887754
No 342
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=44.67 E-value=88 Score=25.19 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=25.9
Q ss_pred CCHHHHHHhhc--cCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEE
Q 038413 4 DEHEKIVSILK--EVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 4 ~d~~~l~~a~~--g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v 48 (191)
.|+.+|.+..+ |++.|+....... .+....+.+.++++| .+.-+
T Consensus 12 ~dpv~l~~irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~G-L~~~v 63 (351)
T PF03786_consen 12 DDPVTLWDIRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAG-LTLSV 63 (351)
T ss_dssp T-SS-HHHHCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT--EEEE
T ss_pred CCcchHHHHHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CeEEE
Confidence 35566666654 8877777665322 455677888888899 87744
No 343
>cd03362 TOPRIM_TopoIA_TopoIII TOPRIM_TopoIA_TopoIII: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to topoisomerase III. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=44.51 E-value=54 Score=22.59 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=29.9
Q ss_pred HHHHHhhccCcEEEEccCCCC--cccHHHHHHHHHH--cCCccEEEcCC
Q 038413 7 EKIVSILKEVDVVISTVAYPQ--FLDQLKIVHAIKV--AGNIKRFLPSE 51 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~--~~~~~~li~aa~~--~g~vkr~v~s~ 51 (191)
..|.+.++++|.||++.-... -....++++.+.. ...++|..+|+
T Consensus 90 ~~ik~l~~~ad~ii~atD~DrEGE~I~~~i~~~~~~~~~~~v~R~~fss 138 (151)
T cd03362 90 KVLKKLAKRADEIVIATDADREGELIGREILEYAKCVKRKPVKRAWFSS 138 (151)
T ss_pred HHHHHHHhCCCeEEEccCCCccccHHHHHHHHHhCCCCCCcEEEEEEcc
Confidence 456677789999999765432 2224678888876 33478877665
No 344
>PRK05434 phosphoglyceromutase; Provisional
Probab=43.23 E-value=1.4e+02 Score=25.40 Aligned_cols=47 Identities=11% Similarity=0.234 Sum_probs=32.8
Q ss_pred CCCCCHHHHHHhhccC---cEEEEccCCCC-------cccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILKEV---DVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~---d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v 48 (191)
|++.+-+.|.++++.+ ...+|+.|... .+....|++.|++.| |+++.
T Consensus 90 g~~~~n~~~~~~~~~~~~~~~~lHl~GL~SdggVHsh~~hl~~l~~~a~~~g-~~~v~ 146 (507)
T PRK05434 90 GSFFENPALLDAIDKAKKNGGALHLMGLLSDGGVHSHIDHLFALLELAKEEG-VKKVY 146 (507)
T ss_pred CCcccCHHHHHHHHHHHhcCCeEEEEEeccCCCcccHHHHHHHHHHHHHHcC-CCEEE
Confidence 3455556666776543 56788877542 456788999999999 97754
No 345
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=43.07 E-value=48 Score=28.82 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=32.6
Q ss_pred CCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 4 DEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 4 ~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
.+.+++...++++|.|++++..........+-++|.+.|
T Consensus 193 ~~~~dl~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkeg 231 (637)
T TIGR03693 193 AEDQHLHEAFEPADWVLYVSDNGDIDDLHALHAFCKEEG 231 (637)
T ss_pred CcchhHHHhhcCCcEEEEECCCCChHHHHHHHHHHHHcC
Confidence 356788889999999999988766667788889999988
No 346
>PRK09330 cell division protein FtsZ; Validated
Probab=43.00 E-value=38 Score=27.54 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=29.2
Q ss_pred CHHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAG 42 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g 42 (191)
+.+.+.++++++|.||.+++..+ .....-+.+.+++.|
T Consensus 87 ~~e~I~~~l~~~D~vfI~AGmGGGTGTGaapvIA~iake~g 127 (384)
T PRK09330 87 SREEIREALEGADMVFITAGMGGGTGTGAAPVVAEIAKELG 127 (384)
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcccHHHHHHHHHHHHHcC
Confidence 35678888999999999998754 344466778888888
No 347
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=42.77 E-value=47 Score=25.23 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=22.2
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
.+++.++++++|+|+.++.+. ....++.+|.++|
T Consensus 51 ~~dl~~ll~~~DvVid~t~p~---~~~~~~~~al~~G 84 (257)
T PRK00048 51 TDDLEAVLADADVLIDFTTPE---ATLENLEFALEHG 84 (257)
T ss_pred cCCHHHhccCCCEEEECCCHH---HHHHHHHHHHHcC
Confidence 356666777899999887543 2244556666666
No 348
>PRK15007 putative ABC transporter arginine-biding protein; Provisional
Probab=42.18 E-value=46 Score=24.42 Aligned_cols=24 Identities=8% Similarity=0.041 Sum_probs=11.1
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHH
Q 038413 161 ELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
|+++.+++.+|.+++++..+...+
T Consensus 49 dl~~~i~~~lg~~~~~~~~~~~~~ 72 (243)
T PRK15007 49 DLAQALCKEIDATCTFSNQAFDSL 72 (243)
T ss_pred HHHHHHHHHhCCcEEEEeCCHHHH
Confidence 444444444444444444444433
No 349
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=40.70 E-value=71 Score=24.05 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=29.3
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s 50 (191)
.+.+.+.++++|+|+.+.... .....+-++|.+.+ +.-+..+
T Consensus 105 ~~~~~~~~~~~DlVvd~~D~~--~~r~~ln~~~~~~~-ip~v~~~ 146 (240)
T TIGR02355 105 DAELAALIAEHDIVVDCTDNV--EVRNQLNRQCFAAK-VPLVSGA 146 (240)
T ss_pred HHHHHHHhhcCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEEE
Confidence 455667788999999987643 34455668999998 6555433
No 350
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=40.63 E-value=73 Score=21.83 Aligned_cols=41 Identities=17% Similarity=0.238 Sum_probs=29.0
Q ss_pred HHHHHhhc--cCcEEEEcc--------CCCCcccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILK--EVDVVISTV--------AYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~--g~d~V~~~~--------~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.++.++++ |+++||+.. +....+.+.++.+++++.| -+.++
T Consensus 20 pAie~c~~~~gaevvfs~TeCFVctaagaMDLEnQ~rvk~~aEk~g-~enlv 70 (150)
T PF04723_consen 20 PAIEECVKTAGAEVVFSSTECFVCTAAGAMDLENQQRVKDLAEKYG-AENLV 70 (150)
T ss_pred HHHHHHHHhcCceEEEEeeeEEEecccccccHHHHHHHHHHHHhcC-CccEE
Confidence 35677775 778887542 2334677899999999999 66644
No 351
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=40.34 E-value=1.6e+02 Score=22.15 Aligned_cols=23 Identities=9% Similarity=0.338 Sum_probs=19.3
Q ss_pred cccHHHHHHHHHHcCCccEEEcCC
Q 038413 28 FLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 28 ~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.+...++++.|.++| |..+|..+
T Consensus 19 ~eesl~ml~~A~~qG-vt~iVaTs 41 (254)
T COG4464 19 LEESLAMLREAVRQG-VTKIVATS 41 (254)
T ss_pred HHHHHHHHHHHHHcC-ceEEeecc
Confidence 566789999999999 99998644
No 352
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]
Probab=40.15 E-value=88 Score=24.35 Aligned_cols=48 Identities=15% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC-c---------ccHHHHHHHHHHcCCccEEEcC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ-F---------LDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~-~---------~~~~~li~aa~~~g~vkr~v~s 50 (191)
|=.=-+.+.+..+|+|++||=+.... . -......+.|+++| ||+++++
T Consensus 198 DT~p~~~~~~~a~~aDlLiHEat~~~~~~~~a~~~~HsT~~eAa~iA~~A~-vk~LiLt 255 (292)
T COG1234 198 DTRPCDELIDLAKGADLLIHEATFEDDLEDLANEGGHSTAEEAAEIAKEAG-VKKLILT 255 (292)
T ss_pred CCCCCHHHHHHhcCCCEEEEeccCCchhhhHHhhcCCCCHHHHHHHHHHcC-CCeEEEE
Confidence 33334566666699999999877643 1 11345677788999 9998863
No 353
>PLN03059 beta-galactosidase; Provisional
Probab=40.09 E-value=94 Score=28.18 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=33.9
Q ss_pred ccHHHHHHHHHHcC--CccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEeccccc
Q 038413 29 LDQLKIVHAIKVAG--NIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYG 95 (191)
Q Consensus 29 ~~~~~li~aa~~~g--~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~ 95 (191)
+.=+..+..+|+.| +|.-+|+. +.+.... ....+......++.++ +.|+ |+|+|||+|.
T Consensus 59 ~~W~d~L~k~Ka~GlNtV~tYV~W--n~HEp~~-----G~~dF~G~~DL~~Fl~la~e~GL-yvilRpGPYI 122 (840)
T PLN03059 59 EMWPDLIQKAKDGGLDVIQTYVFW--NGHEPSP-----GNYYFEDRYDLVKFIKVVQAAGL-YVHLRIGPYI 122 (840)
T ss_pred HHHHHHHHHHHHcCCCeEEEEecc--cccCCCC-----CeeeccchHHHHHHHHHHHHcCC-EEEecCCcce
Confidence 34477889999998 45556653 3333322 1111222344445544 3455 7999999976
No 354
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=39.60 E-value=1.5e+02 Score=24.98 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=33.3
Q ss_pred CCCCCHHHHHHhhccC---cEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKEV---DVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~---d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
||+.+-..+..++..+ +..+|+++... .+-...+++.|++.| +++++.
T Consensus 89 g~f~~n~~l~~~~~~v~~~~~~lHlmGl~S~GGVHSh~~Hl~ali~~a~k~g-~~kV~~ 146 (509)
T COG0696 89 GSFFENPALLNAIDEVKANGSALHLMGLVSDGGVHSHIDHLLALIELAAKNG-MKKVYL 146 (509)
T ss_pred CcccccHHHHHHHHHhhhcCceEEEEecccCCcccchHHHHHHHHHHHHhcC-CcEEEE
Confidence 4555666677777644 46777777543 455688999999999 877653
No 355
>PRK15010 ABC transporter lysine/arginine/ornithine binding periplasmic protein; Provisional
Probab=39.33 E-value=57 Score=24.41 Aligned_cols=27 Identities=11% Similarity=-0.007 Sum_probs=13.4
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHHH
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVKL 187 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~~ 187 (191)
|+++.+++.+|.+++++..|.+.+...
T Consensus 54 dl~~~ia~~lg~~~~~~~~~~~~~~~~ 80 (260)
T PRK15010 54 DLGNEMCKRMQVKCTWVASDFDALIPS 80 (260)
T ss_pred HHHHHHHHHhCCceEEEeCCHHHHHHH
Confidence 455555555555555555444444433
No 356
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=38.89 E-value=45 Score=21.44 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=20.2
Q ss_pred HHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 9 IVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 9 l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
+.+.++ +.|+|+.+.+. .....++..|.++|
T Consensus 54 ~~~ll~~~~~D~V~I~tp~---~~h~~~~~~~l~~g 86 (120)
T PF01408_consen 54 LEELLADEDVDAVIIATPP---SSHAEIAKKALEAG 86 (120)
T ss_dssp HHHHHHHTTESEEEEESSG---GGHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCEEEEecCC---cchHHHHHHHHHcC
Confidence 445554 78999987765 33455666666677
No 357
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=38.63 E-value=1.7e+02 Score=21.88 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=43.0
Q ss_pred CCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHHhcC
Q 038413 4 DEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVE 83 (191)
Q Consensus 4 ~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~ 83 (191)
.|+++.-..+..+|.++...-- .+.+..|.+.|+++| ++-+|..+.... .....+.++.+++.|
T Consensus 40 d~pee~Lp~i~~~Dl~I~y~lH--PDl~~~l~~~~~e~g-~kavIvp~~~~~-------------~g~~~~lk~~~e~~g 103 (217)
T PF02593_consen 40 DDPEEYLPKIPEADLLIAYGLH--PDLTYELPEIAKEAG-VKAVIVPSESPK-------------PGLRRQLKKQLEEFG 103 (217)
T ss_pred cChHHHccCCCCCCEEEEeccC--chhHHHHHHHHHHcC-CCEEEEecCCCc-------------cchHHHHHHHHHhcC
Confidence 4455444447899999885442 377788999999999 998774321110 223456667777777
Q ss_pred CCeE
Q 038413 84 IPYT 87 (191)
Q Consensus 84 ~~~t 87 (191)
+++.
T Consensus 104 i~~~ 107 (217)
T PF02593_consen 104 IEVE 107 (217)
T ss_pred ceee
Confidence 6543
No 358
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription]
Probab=38.61 E-value=1.2e+02 Score=24.81 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=52.4
Q ss_pred CceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 109 HDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 109 ~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++.....++| ....+-.+..|-+++.++.+..-.|+.+.+.| +...----++=.+++-+|.+.+++.++..++
T Consensus 31 ng~~k~~~dG--~VGQ~~AReAaGvIv~mik~gk~aGrgiLi~G-ppgTGKTAlA~gIa~eLG~dvPF~~isgsEi 103 (450)
T COG1224 31 NGKAKFIGDG--LVGQEEAREAAGVIVKMIKQGKMAGRGILIVG-PPGTGKTALAMGIARELGEDVPFVAISGSEI 103 (450)
T ss_pred CCCEeEcCCc--ccchHHHHHhhhHHHHHHHhCcccccEEEEEC-CCCCcHHHHHHHHHHHhCCCCCceeecccee
Confidence 4455555544 34556678888889999998876678888774 4445555677789999999999998876544
No 359
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional
Probab=38.25 E-value=76 Score=24.14 Aligned_cols=43 Identities=7% Similarity=0.025 Sum_probs=33.8
Q ss_pred CHHHHHHhh-ccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSIL-KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a~-~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
|+..+.++. .|+|+|...++.-..+....+++.|+.-| ..-+|
T Consensus 113 d~~QI~ea~~~GADavLLI~~~L~~~~l~~l~~~a~~lG-le~LV 156 (247)
T PRK13957 113 DEIQIREARAFGASAILLIVRILTPSQIKSFLKHASSLG-MDVLV 156 (247)
T ss_pred CHHHHHHHHHcCCCEEEeEHhhCCHHHHHHHHHHHHHcC-CceEE
Confidence 566666665 49999988777666567788999999999 87776
No 360
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=38.07 E-value=71 Score=22.08 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=9.9
Q ss_pred ccHHHHHHHHHHcCCccEEE
Q 038413 29 LDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 29 ~~~~~li~aa~~~g~vkr~v 48 (191)
+....+++++++.| +.++.
T Consensus 78 ~l~~~lve~lre~G-~~~i~ 96 (143)
T COG2185 78 TLVPGLVEALREAG-VEDIL 96 (143)
T ss_pred HHHHHHHHHHHHhC-CcceE
Confidence 33455555555555 55543
No 361
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=38.04 E-value=37 Score=25.67 Aligned_cols=27 Identities=15% Similarity=0.438 Sum_probs=22.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ 27 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~ 27 (191)
+|++|.+++.++|. ..|.++|+.++.+
T Consensus 63 cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 63 CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAP 96 (259)
T ss_pred cCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence 58888888888874 4799999999865
No 362
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=37.99 E-value=75 Score=25.34 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=29.3
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+.++++|+|+.+... ......+-++|.+.+ +..+.
T Consensus 107 ~~~~~~~~~~~DlVid~~Dn--~~~r~~ln~~~~~~~-iP~i~ 146 (339)
T PRK07688 107 AEELEELVTGVDLIIDATDN--FETRFIVNDAAQKYG-IPWIY 146 (339)
T ss_pred HHHHHHHHcCCCEEEEcCCC--HHHHHHHHHHHHHhC-CCEEE
Confidence 45566778999999998663 344556778999998 76654
No 363
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=37.85 E-value=2.2e+02 Score=23.00 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=26.6
Q ss_pred HHHHhhc-cCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILK-EVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~-g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v 48 (191)
++++|++ |+|+|-....... +.....+.+.|++.| +--++
T Consensus 151 sVedAlrLGAdAV~~tvy~Gs~~E~~ml~~l~~i~~ea~~~G-lPlv~ 197 (348)
T PRK09250 151 SVEDALRLGAVAVGATIYFGSEESRRQIEEISEAFEEAHELG-LATVL 197 (348)
T ss_pred cHHHHHHCCCCEEEEEEecCCHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 4677886 8998865544322 334466788888999 77554
No 364
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=37.46 E-value=69 Score=25.11 Aligned_cols=39 Identities=23% Similarity=0.163 Sum_probs=30.4
Q ss_pred HHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcCCcc
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAGNIK 45 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g~vk 45 (191)
.+.+.+.++++|.||.+++..+ ......+++.+++.+ ..
T Consensus 75 ~~~I~~~le~~D~v~i~aglGGGTGSG~ap~ia~~~ke~~-~~ 116 (303)
T cd02191 75 QEAIDNIPVHVDMVFITAGLGGGTGTGGAPVVAEHLKRIG-TL 116 (303)
T ss_pred HHHHHHHHcCCCEEEEEeccCCccchhHHHHHHHHHHHhC-CC
Confidence 4567888899999999888654 445677889999988 53
No 365
>PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the AAA ATPase, central region IPR003959 from INTERPRO domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway []. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities. TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases [].; GO: 0003678 DNA helicase activity, 0005524 ATP binding; PDB: 2XSZ_E 2CQA_A 2C9O_C.
Probab=37.18 E-value=98 Score=25.29 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=44.3
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
......+-.|-.++.++....-.|+.+.+.| +.-.----++-.+++.+|.++++..++..|+
T Consensus 27 VGQ~~AReAagiiv~mIk~~K~aGr~iLiaG-ppGtGKTAlA~~ia~eLG~~~PF~~isgSEi 88 (398)
T PF06068_consen 27 VGQEKAREAAGIIVDMIKEGKIAGRAILIAG-PPGTGKTALAMAIAKELGEDVPFVSISGSEI 88 (398)
T ss_dssp ES-HHHHHHHHHHHHHHHTT--TT-EEEEEE--TTSSHHHHHHHHHHHCTTTS-EEEEEGGGG
T ss_pred cChHHHHHHHHHHHHHHhcccccCcEEEEeC-CCCCCchHHHHHHHHHhCCCCCeeEccccee
Confidence 4456678888889999988876788888885 4455555688899999999999998876554
No 366
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=36.72 E-value=17 Score=19.41 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=12.5
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
.++..+-+..+++.....++.+++++.|
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll 34 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELL 34 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHH
Confidence 3444444444443333344455554444
No 367
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed
Probab=36.56 E-value=1.4e+02 Score=24.52 Aligned_cols=97 Identities=7% Similarity=0.107 Sum_probs=48.9
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee-cchhhHHHHHHHHhc--CcccCCcee
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF-NYEEDIAKCTIKVIN--DPRTCNRIV 148 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-i~~~Dva~~~~~~l~--~~~~~~~~~ 148 (191)
-.++.+.|++.|++..++++..+.-+....+.......+.+.+.......-.+ -.+.|+..++..... .|.-.+..+
T Consensus 282 a~ea~~~L~~~G~kvgvi~~r~~~Pfp~~~l~~~l~~~k~VvVvE~~~~~Gg~G~l~~ev~~al~~~~~~~~~~v~~~~~ 361 (407)
T PRK09622 282 AIVAAKEMRKEGIKAGVATIRVLRPFPYERLGQALKNLKALAILDRSSPAGAMGALFNEVTSAVYQTQGTKHPVVSNYIY 361 (407)
T ss_pred HHHHHHHHHhCCCCeEEEEeeEhhhCCHHHHHHHHhcCCEEEEEeCCCCCCCccHHHHHHHHHHhccCcCCCceEeeeEE
Confidence 34455667778999988887765432111111111133445555433211010 234455444432211 122223444
Q ss_pred EeecCCCccCHHHHHHHHHHHh
Q 038413 149 IYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 149 ~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
.++ +..+|..++.+.+.+..
T Consensus 362 g~g--G~~~t~~~i~~~~~~l~ 381 (407)
T PRK09622 362 GLG--GRDMTIAHLCEIFEELN 381 (407)
T ss_pred CCC--CCCCCHHHHHHHHHHHH
Confidence 453 68999999999997654
No 368
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=36.38 E-value=91 Score=23.09 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=28.3
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+.++++|+||.++... .....+-++|.+.+ +..+.
T Consensus 102 ~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~-ip~i~ 141 (228)
T cd00757 102 AENAEELIAGYDLVLDCTDNF--ATRYLINDACVKLG-KPLVS 141 (228)
T ss_pred HHHHHHHHhCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 455667788999999987643 44456778888888 65543
No 369
>cd06353 PBP1_BmpA_Med_like Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Med, a cell-surface localized protein, which regulates the competence transcription factor gene comK in Bacillus subtilis, lacks the DNA binding domain when compared with structures of transcription regulators from the LacI family. Nevertheless, Med has significant overall sequence homology to various periplasmic substrate-binding proteins. Moreover, the structure of Med shows a striking similarity to PnrA, a periplasmic nucleoside binding protein of an ATP-binding cassette transport system. Members of this group contain the type I periplasmic sugar-binding protein-like fold.
Probab=36.29 E-value=66 Score=24.33 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=18.5
Q ss_pred ccCcEEEEccCCCCcccHHHHHHHHHHcCCc
Q 038413 14 KEVDVVISTVAYPQFLDQLKIVHAIKVAGNI 44 (191)
Q Consensus 14 ~g~d~V~~~~~~~~~~~~~~li~aa~~~g~v 44 (191)
+|+|+||.+++ . .-+++||++.| +
T Consensus 178 ~G~DvI~~~~~--~----~g~~~aa~~~g-~ 201 (258)
T cd06353 178 QGADVIYQHTD--S----PGVIQAAEEKG-V 201 (258)
T ss_pred CCCcEEEecCC--C----hHHHHHHHHhC-C
Confidence 49999998872 1 34889999999 5
No 370
>COG2100 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=36.26 E-value=1e+02 Score=24.73 Aligned_cols=57 Identities=23% Similarity=0.166 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHH-HHHHHHHHhcCCCeEE
Q 038413 31 QLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKK-RIVRRAIEAVEIPYTF 88 (191)
Q Consensus 31 ~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k-~~~e~~l~~~~~~~ti 88 (191)
...++++.+++| +.||-.|.-..+............|.-.| .++.+++.+++++..+
T Consensus 203 ~~~lv~eLeeAG-LdRiNlSv~aLDpk~Ak~L~G~~dYdv~kvle~aE~i~~a~idvlI 260 (414)
T COG2100 203 SKKLVDELEEAG-LDRINLSVDALDPKLAKMLAGRKDYDVKKVLEVAEYIANAGIDVLI 260 (414)
T ss_pred cHHHHHHHHHhC-CceEEeecccCCHHHHHHhcCccccCHHHHHHHHHHHHhCCCCEEE
Confidence 477889999999 99987764332221110000111232222 4556677778998654
No 371
>PHA02099 hypothetical protein
Probab=36.00 E-value=25 Score=20.74 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=12.0
Q ss_pred hhccCcEEEEccCCC
Q 038413 12 ILKEVDVVISTVAYP 26 (191)
Q Consensus 12 a~~g~d~V~~~~~~~ 26 (191)
.+.|+|+|||+-+..
T Consensus 40 ~~~g~diifha~gy~ 54 (84)
T PHA02099 40 NFEGVDIVFHAEGYN 54 (84)
T ss_pred ecCCccEEEEcCCCC
Confidence 367999999987764
No 372
>TIGR02651 RNase_Z ribonuclease Z. Processing of the 3-prime end of tRNA precursors may be the result of endonuclease or exonuclease activity, and differs in different species. Member of this family are ribonuclease Z, a tRNA 3-prime endonuclease that processes tRNAs to prepare for addition of CCA. In species where all tRNA sequences already have the CCA tail, such as E. coli, the need for such an enzyme is unclear. Protein similar to the E. coli enzyme, matched by TIGR02649, are designated ribonuclease BN.
Probab=35.63 E-value=1.4e+02 Score=22.96 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=32.5
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCCc----------ccHHHHHHHHHHcCCccEEEcC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQF----------LDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~~----------~~~~~li~aa~~~g~vkr~v~s 50 (191)
|-.-.+.+.+.++++|.++|=+..... ......++.+++.+ ++++++.
T Consensus 208 Dt~~~~~~~~~~~~~dlLi~E~~~~~~~~~~~~~~~H~t~~~a~~~~~~~~-~k~lvlt 265 (299)
T TIGR02651 208 DTRPCEEVIEFAKNADLLIHEATFLDEDKKLAKEYGHSTAAQAAEIAKEAN-VKRLILT 265 (299)
T ss_pred CCCChHHHHHHHcCCCEEEEECCCCchhHHHHhhcCCCCHHHHHHHHHHcC-CCEEEEE
Confidence 444445666778899999987664321 12355778888889 9998853
No 373
>PRK13265 glycine/sarcosine/betaine reductase complex protein A; Reviewed
Probab=35.58 E-value=96 Score=21.29 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=28.2
Q ss_pred HHHHhhc--cCcEEEEcc--------CCCCcccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILK--EVDVVISTV--------AYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~--g~d~V~~~~--------~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+..+++ |+++||+.. +...++.++++.+.+++.| -..++
T Consensus 22 Aie~c~k~~gaevvfs~TECfVctaAGAMDLEnQ~Rvk~~aEk~g-~eNvv 71 (154)
T PRK13265 22 AIEECVKTTGAEVVFSSTECFVUTAAGAMDLENQKRVKDLAEKFG-AENVV 71 (154)
T ss_pred HHHHHHhccCceEEEEeeeEEEeecccccchHHHHHHHHHHHhcC-CccEE
Confidence 5666775 788887532 2334677899999999998 66644
No 374
>PRK11260 cystine transporter subunit; Provisional
Probab=35.53 E-value=71 Score=24.00 Aligned_cols=26 Identities=8% Similarity=0.037 Sum_probs=11.9
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHH
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVK 186 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~ 186 (191)
|+++.+++.+|.+++++..|..+...
T Consensus 69 dl~~~i~~~lg~~~e~~~~~~~~~~~ 94 (266)
T PRK11260 69 EFAEALAKHLGVKASLKPTKWDGMLA 94 (266)
T ss_pred HHHHHHHHHHCCeEEEEeCCHHHHHH
Confidence 44444444444444444444444333
No 375
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=35.16 E-value=2.4e+02 Score=22.71 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=32.4
Q ss_pred CCHHHHHHhhc-cCcEEEEccCCC---------CcccHHHHHHHHHHcCCccEEEcCC
Q 038413 4 DEHEKIVSILK-EVDVVISTVAYP---------QFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 4 ~d~~~l~~a~~-g~d~V~~~~~~~---------~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.+.+.+..+++ |+|+||.--... ..+.....++.|+++| +|.+|.+.
T Consensus 14 g~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~g-kk~~V~~N 70 (347)
T COG0826 14 GNLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAG-KKVYVAVN 70 (347)
T ss_pred CCHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcC-CeEEEEec
Confidence 35667777775 899998742211 1344677899999999 88887643
No 376
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated
Probab=35.12 E-value=2.5e+02 Score=22.85 Aligned_cols=86 Identities=9% Similarity=0.016 Sum_probs=40.2
Q ss_pred HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecC
Q 038413 74 IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQ 153 (191)
Q Consensus 74 ~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~ 153 (191)
++-+.|++.|++..++++..+.-.............+.+.+.... ..-++.-+...+......+.+..+ +
T Consensus 290 eAv~~Lr~~G~~v~~l~~~~l~Pfp~~~i~~~~~~~k~VivvEe~--------~g~l~~el~~~~~~~~~~~~i~~~--~ 359 (376)
T PRK08659 290 RAVKEAREEGIKVGLFRLITVWPFPEEAIRELAKKVKAIVVPEMN--------LGQMSLEVERVVNGRAKVEGINKI--G 359 (376)
T ss_pred HHHHHHHhcCCceEEEEeCeecCCCHHHHHHHHhcCCEEEEEeCC--------HHHHHHHHHHHhCCCCCeeEEecc--C
Confidence 334455667777777776655432111111100122334444322 233333344444321111222223 2
Q ss_pred CCccCHHHHHHHHHHH
Q 038413 154 TNIISQLELISLWEQK 169 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~ 169 (191)
+..+|..|+.+.+.+.
T Consensus 360 G~~~~~~ei~~~~~~~ 375 (376)
T PRK08659 360 GELITPEEILEKIKEV 375 (376)
T ss_pred CCcCCHHHHHHHHHhh
Confidence 6889999998887654
No 377
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=35.12 E-value=1.3e+02 Score=19.64 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=39.1
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
...+|..+|+++.+.. .+ .-+++..-+ ++.+|-.=+.++|.+.-.... --+|.+-+...+
T Consensus 16 tS~YITLedi~~lV~~----g~-~f~V~DakT-geDiT~~iL~QII~E~E~~g~--~~lp~~~L~qlI 75 (107)
T TIGR01848 16 TSSYVTLEDIRDLVRE----GR-EFQVVDSKS-GDDLTRSILLQIIAEEESGGE--PVLSTDFLTQII 75 (107)
T ss_pred ccceeeHHHHHHHHHC----CC-eEEEEECCC-CchhHHHHHHHHHHHHHhCCC--CCCCHHHHHHHH
Confidence 3579999999987654 11 124444443 799999999999998754332 234665555544
No 378
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=35.04 E-value=27 Score=20.15 Aligned_cols=42 Identities=7% Similarity=0.140 Sum_probs=29.3
Q ss_pred ceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 146 RIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 146 ~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
+.+.+.| ...++-.++.+.+....|.+ +..++.+++.+.++.
T Consensus 4 ~~I~V~G-~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~l~~ 45 (69)
T PF08478_consen 4 KKIEVSG-NSYLSKEEILQALGIQKGKN--LFSLDLKKIEQRLEK 45 (69)
T ss_dssp -EEEEES--SSS-HHHHHHHHCTTSTTT--CCCSHHHHHHHCCCC
T ss_pred cEEEEEC-CCcCCHHHHHHHhCcCCCCe--EEEECHHHHHHHHHc
Confidence 3566775 78899999999988888777 346777777776653
No 379
>PRK08328 hypothetical protein; Provisional
Probab=34.93 E-value=1e+02 Score=22.96 Aligned_cols=40 Identities=23% Similarity=0.235 Sum_probs=27.3
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+.++++|+|+.+.... .....+-++|++.+ +.-+-
T Consensus 109 ~~~~~~~l~~~D~Vid~~d~~--~~r~~l~~~~~~~~-ip~i~ 148 (231)
T PRK08328 109 EENIDEVLKGVDVIVDCLDNF--ETRYLLDDYAHKKG-IPLVH 148 (231)
T ss_pred HHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 455666788999999987643 33344567888888 65443
No 380
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]
Probab=34.57 E-value=59 Score=25.98 Aligned_cols=38 Identities=24% Similarity=0.163 Sum_probs=30.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAG 42 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g 42 (191)
+.+.+.++++|.|.||..++..+ .....-+.+++++.|
T Consensus 85 ~~~~I~~~l~g~dmvfitaG~GGGTGtGaaPVvakiake~g 125 (338)
T COG0206 85 SIEEIEEALKGADMVFVTAGMGGGTGTGAAPVVAEIAKELG 125 (338)
T ss_pred HHHHHHHHhccCCeEEEEeeecCCccccccHHHHHHHHhcC
Confidence 46778889999999999888754 455688899999987
No 381
>PRK15437 histidine ABC transporter substrate-binding protein HisJ; Provisional
Probab=34.49 E-value=76 Score=23.72 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=13.1
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHH
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVK 186 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~ 186 (191)
|+++.+++.+|.+++++..|......
T Consensus 54 di~~~ia~~lg~~i~~~~~pw~~~~~ 79 (259)
T PRK15437 54 DLAKELCKRINTQCTFVENPLDALIP 79 (259)
T ss_pred HHHHHHHHHcCCceEEEeCCHHHHHH
Confidence 45555555555555555555444433
No 382
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=34.21 E-value=97 Score=24.71 Aligned_cols=40 Identities=25% Similarity=0.319 Sum_probs=29.0
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.+.++++|+|+.+... ......+-++|++.| +..+.
T Consensus 107 ~~~~~~~~~~~DlVid~~D~--~~~r~~in~~~~~~~-ip~i~ 146 (338)
T PRK12475 107 VEELEELVKEVDLIIDATDN--FDTRLLINDLSQKYN-IPWIY 146 (338)
T ss_pred HHHHHHHhcCCCEEEEcCCC--HHHHHHHHHHHHHcC-CCEEE
Confidence 45677788999999998753 344445668899988 77654
No 383
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=34.20 E-value=1.4e+02 Score=19.96 Aligned_cols=37 Identities=24% Similarity=0.234 Sum_probs=27.4
Q ss_pred HHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 10 VSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 10 ~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
...+.++|+|+.+... ......+.++|++.+ +..+..
T Consensus 84 ~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~-i~~i~~ 120 (143)
T cd01483 84 DDFLDGVDLVIDAIDN--IAVRRALNRACKELG-IPVIDA 120 (143)
T ss_pred HHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEE
Confidence 4567899999998775 355677889999998 655443
No 384
>PRK08462 biotin carboxylase; Validated
Probab=34.13 E-value=88 Score=25.78 Aligned_cols=15 Identities=13% Similarity=0.397 Sum_probs=7.3
Q ss_pred HHHHHHHHHHhcCCC
Q 038413 71 KKRIVRRAIEAVEIP 85 (191)
Q Consensus 71 ~k~~~e~~l~~~~~~ 85 (191)
.|..+.+.+++.|++
T Consensus 117 dK~~~r~~l~~~gIp 131 (445)
T PRK08462 117 DKSKAKEVMKRAGVP 131 (445)
T ss_pred CHHHHHHHHHHCCCC
Confidence 455555555544443
No 385
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=33.99 E-value=1.6e+02 Score=24.08 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=35.0
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC---cccHHHHHHHHHHcCCccEEEc--CCccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ---FLDQLKIVHAIKVAGNIKRFLP--SEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~---~~~~~~li~aa~~~g~vkr~v~--s~~g~ 54 (191)
|..-|++++.++++ ++++|...-+.+. ..-...|.++|+++| ..-+|. |++|.
T Consensus 114 g~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g-~l~iVDaVsS~Gg 174 (383)
T COG0075 114 GEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHG-ALLIVDAVSSLGG 174 (383)
T ss_pred CCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcC-CEEEEEecccCCC
Confidence 34568899999997 4666665444333 234577999999999 655663 55553
No 386
>PF08915 tRNA-Thr_ED: Archaea-specific editing domain of threonyl-tRNA synthetase; InterPro: IPR015011 Archaea-specific editing domain of threonyl-tRNA synthetase, with marked structural similarity to D-amino acids deacylases found in eubacteria and eukaryotes. This domain can bind D-amino acids, and ensures high fidelity during translation. It is especially responsible for removing incorrectly attached serine from tRNA-Thr. The domain forms a fold that can be defined as two layers of beta-sheets (a three-stranded sheet and a five-stranded sheet), with two alpha-helices located adjacent to the five-stranded sheet []. ; GO: 0004829 threonine-tRNA ligase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0005737 cytoplasm; PDB: 3PD4_B 3PD3_A 2HL0_A 2HL1_A 2HKZ_A 3PD5_B 2HL2_A 3PD2_B 1Y2Q_A.
Probab=33.94 E-value=1.6e+02 Score=20.27 Aligned_cols=62 Identities=10% Similarity=0.045 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhH--HHHHHHHHHHHhcCCCeEEEeccccccc
Q 038413 30 DQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYL--EKKRIVRRAIEAVEIPYTFVSANCYGAY 97 (191)
Q Consensus 30 ~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~--~~k~~~e~~l~~~~~~~tilrp~~~~~~ 97 (191)
...++.+.+++-+ ++++|.-.|..-..+ ...|.. .--..+++.|.+.|++...-..|||-.+
T Consensus 59 av~eI~~~a~kv~-~~~ivlyPyAHLSs~-----La~P~~A~~iL~~le~~L~~~g~eV~raPFGwyK~F 122 (138)
T PF08915_consen 59 AVEEIKWVAKKVK-AKRIVLYPYAHLSSS-----LASPDVAVEILKKLEERLKSRGFEVYRAPFGWYKEF 122 (138)
T ss_dssp HHHHHHHHHHHTT--SEEEEEE-GGGSSS-----B--HHHHHHHHHHHHHHHHHTT-EEEE--TTEEEEE
T ss_pred HHHHHHHHHHhcC-CCEEEEeCcccccCC-----cCChHHHHHHHHHHHHHHHhCCCeEEEeCCccceeE
Confidence 4578889999999 999885444321111 111222 2335667777777888666666666554
No 387
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=33.85 E-value=61 Score=24.73 Aligned_cols=17 Identities=24% Similarity=0.511 Sum_probs=12.1
Q ss_pred HHHhhccCcEEEEccCC
Q 038413 9 IVSILKEVDVVISTVAY 25 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~ 25 (191)
+.+.+.++|+|+.+++.
T Consensus 55 ~~ell~~~DvVvi~a~~ 71 (265)
T PRK13304 55 IDELVEDVDLVVECASV 71 (265)
T ss_pred HHHHhcCCCEEEEcCCh
Confidence 44445788999988764
No 388
>cd01028 TOPRIM_TopoIA TOPRIM_TopoIA: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in the type IA family of DNA topoisomerases (TopoIA). This subgroup contains proteins similar to the Type I DNA topoisomerases: E. coli topisomerases I and III, eukaryotic topoisomerase III and, ATP-dependent reverse gyrase found in archaea and thermophilic bacteria. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA. These enzymes cleave one strand of the DNA duplex, covalently link to the 5' phosphoryl end of the DNA break and allow the other strand of the duplex to pass through the gap. Reverse gyrase is also able to insert positive supercoils in the presence of ATP and negative supercoils in the presence of AMPPNP. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general b
Probab=33.56 E-value=1e+02 Score=20.93 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=29.5
Q ss_pred HHHHHhhccCcEEEEccCCCC--cccHHHHHHHHHH-cCCccEEEcCCc
Q 038413 7 EKIVSILKEVDVVISTVAYPQ--FLDQLKIVHAIKV-AGNIKRFLPSEF 52 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~--~~~~~~li~aa~~-~g~vkr~v~s~~ 52 (191)
+.|.+.++++|.||++.-+.. -....++++.+.. ...++|..+|+.
T Consensus 82 ~~ik~l~~~~d~iiiAtD~DrEGE~I~~~i~~~~~~~~~~v~R~~fssl 130 (142)
T cd01028 82 KALKKLAKKADEIVLATDPDREGELIAWEILEVLKCDNKPVKRAWFSEI 130 (142)
T ss_pred HHHHHHHhcCCEEEEcCCCCcchHHHHHHHHHHhCCCCCCeEEEEEccC
Confidence 345666778999999765432 1223667777775 334888877653
No 389
>PRK13018 cell division protein FtsZ; Provisional
Probab=33.33 E-value=64 Score=26.26 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=29.0
Q ss_pred HHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAG 42 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g 42 (191)
.+.+.++++++|.||.+++..+ ......+++.+++.+
T Consensus 103 ~d~I~~~le~~D~vfI~aGLGGGTGSGaapvIa~iake~g 142 (378)
T PRK13018 103 RDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQG 142 (378)
T ss_pred HHHHHHHhcCCCEEEEEeeccCcchhhHHHHHHHHHHHcC
Confidence 4678888999999999888654 344577888888877
No 390
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=32.55 E-value=1.4e+02 Score=25.31 Aligned_cols=47 Identities=9% Similarity=0.222 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHhhccC---cEEEEccCCCC-------cccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILKEV---DVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~---d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v 48 (191)
|++.+-+.|.++++.+ ..-+|++|... .+....|++.|++.| |+++.
T Consensus 86 g~~~~n~~l~~~~~~~~~~~~~lHl~GL~SdGgVHsh~~hl~~l~~~a~~~g-~~~v~ 142 (501)
T TIGR01307 86 GEFFANPALLGAIDRAKDNNGKLHLMGLVSDGGVHSHIDHLIALIELAAERG-IEKVV 142 (501)
T ss_pred CCcccCHHHHHHHHHHHhcCCceEEEEeccCCCCcchHHHHHHHHHHHHHcC-CCeEE
Confidence 4555556666676533 44577776542 466788999999999 97754
No 391
>PF11080 DUF2622: Protein of unknown function (DUF2622); InterPro: IPR022597 This family is conserved in the Enterobacteriaceae family. The function is not known.
Probab=32.52 E-value=1e+02 Score=19.76 Aligned_cols=29 Identities=17% Similarity=0.023 Sum_probs=14.2
Q ss_pred HHHHHHHHH-HHhCCceEEEEcCHHHHHHH
Q 038413 159 QLELISLWE-QKTGRSFKRVHISEEELVKL 187 (191)
Q Consensus 159 ~~e~~~~~~-~~~g~~~~~~~~~~~~~~~~ 187 (191)
.+++++.++ .++|+++.+.....++|.+.
T Consensus 65 V~~la~~lae~algk~p~V~V~t~~e~~~~ 94 (96)
T PF11080_consen 65 VAQLARGLAESALGKTPEVEVTTWEEWLKD 94 (96)
T ss_pred HHHHHHHHhhhhcCCCCceEEEEHHHHHhh
Confidence 333333333 44455555555555555543
No 392
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=32.46 E-value=62 Score=25.60 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=40.3
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
..+..+.-+++.++..+-+..-..+-+ .+.+++.|++..+.+.++.|+--.++|-|-.
T Consensus 223 Qmdp~N~~EAlre~~~D~~EGAD~lMV---KPal~YLDIi~~~k~~~~~P~~aYqVSGEYa 280 (324)
T PF00490_consen 223 QMDPANRREALREAELDIEEGADILMV---KPALPYLDIIRRVKERFDLPVAAYQVSGEYA 280 (324)
T ss_dssp SB-TT-HHHHHHHHHHHHHTT-SEEEE---ESSGGGHHHHHHHHHHCTS-EEEEETHHHHH
T ss_pred cCCCccHHHHHHHhhhhHhhCCCEEEe---ecchhHHHHHHHHHHhcCCCEEEEEehHHHH
Confidence 345666667777777664433344444 6799999999999999999988888887643
No 393
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=32.26 E-value=47 Score=24.78 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=16.3
Q ss_pred HHHHHhhccCcEEEEccCCCC
Q 038413 7 EKIVSILKEVDVVISTVAYPQ 27 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~ 27 (191)
+.+.+++.++|+|||+|+...
T Consensus 73 ~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 73 ETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred HHHHHHhcCCCEEEeCCccCC
Confidence 345566778999999999754
No 394
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=31.90 E-value=1.2e+02 Score=24.84 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
||.++.+.|.++ ++++|+|+.+.+.. .....+...|++.+ +++++.
T Consensus 282 gd~~~~~~L~~~~~~~a~~vi~~~~~~--~~n~~~~~~~~~~~-~~~ii~ 328 (453)
T PRK09496 282 GDGTDQELLEEEGIDEADAFIALTNDD--EANILSSLLAKRLG-AKKVIA 328 (453)
T ss_pred CCCCCHHHHHhcCCccCCEEEECCCCc--HHHHHHHHHHHHhC-CCeEEE
Confidence 688888888765 47899998876642 22233444567778 777663
No 395
>TIGR02452 conserved hypothetical protein TIGR02452. Members of this uncharacterized protein family are found in Streptomyces, Nostoc sp. PCC 7120, Clostridium acetobutylicum, Lactobacillus johnsonii NCC 533, Deinococcus radiodurans, and Pirellula sp. for a broad but sparse phylogenetic distibution that at least suggests lateral gene transfer.
Probab=31.81 E-value=58 Score=25.08 Aligned_cols=24 Identities=17% Similarity=0.444 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCCccEEEcCCcccC
Q 038413 31 QLKIVHAIKVAGNIKRFLPSEFGCE 55 (191)
Q Consensus 31 ~~~li~aa~~~g~vkr~v~s~~g~~ 55 (191)
++.+++.|..+| ++++|++.||+.
T Consensus 194 m~~vL~ia~~~g-~~~LVLGA~GCG 217 (266)
T TIGR02452 194 MYKVLNIAEDQN-IDALVLGAWGCG 217 (266)
T ss_pred HHHHHHHHHHcC-CCEEEECCcccc
Confidence 577899999999 999999999986
No 396
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=31.35 E-value=74 Score=24.86 Aligned_cols=37 Identities=24% Similarity=0.182 Sum_probs=28.5
Q ss_pred HHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcC
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAG 42 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g 42 (191)
.+.+.++++++|.||.+++..+ ......+.+.+++.|
T Consensus 75 ~~~I~~~l~~~d~v~i~aglGGGTGSG~ap~ia~~a~e~g 114 (304)
T cd02201 75 REEIKEALEGADMVFITAGMGGGTGTGAAPVIAKIAKEMG 114 (304)
T ss_pred HHHHHHHHhCCCEEEEeeccCCCcchhHHHHHHHHHHHcC
Confidence 4567888999999999888654 344566888888888
No 397
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=31.31 E-value=85 Score=21.71 Aligned_cols=43 Identities=19% Similarity=0.094 Sum_probs=26.1
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
|+..+...-.|+|+|+-+.+.... ++-.+.=.++| +|+++.|.
T Consensus 77 ~p~~~~w~~~gvDiVie~tG~f~~---~~~~~~hl~~G-akkViisa 119 (149)
T smart00846 77 DPANLPWKELGVDIVVECTGKFTT---REKASAHLKAG-AKKVIISA 119 (149)
T ss_pred ChHHCcccccCCeEEEeccccccc---hHHHHHHHHcC-CCEEEeCC
Confidence 445554444689999999775432 22222333568 99988664
No 398
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=31.29 E-value=1e+02 Score=24.70 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=27.0
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
.+.+.+.++++|+|+.+.... .....+-++|.+.+ +..+
T Consensus 109 ~~~~~~~~~~~DvVvd~~d~~--~~r~~~n~~c~~~~-ip~v 147 (355)
T PRK05597 109 WSNALDELRDADVILDGSDNF--DTRHLASWAAARLG-IPHV 147 (355)
T ss_pred HHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEE
Confidence 345556788999999987643 33344667899988 6544
No 399
>PRK09620 hypothetical protein; Provisional
Probab=31.25 E-value=28 Score=26.04 Aligned_cols=21 Identities=38% Similarity=0.502 Sum_probs=16.2
Q ss_pred HHHHHhhc--cCcEEEEccCCCC
Q 038413 7 EKIVSILK--EVDVVISTVAYPQ 27 (191)
Q Consensus 7 ~~l~~a~~--g~d~V~~~~~~~~ 27 (191)
+.+.+++. ++|+|||+|+...
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHhcccCCCEEEECccccc
Confidence 45667774 6899999999764
No 400
>PRK09495 glnH glutamine ABC transporter periplasmic protein; Reviewed
Probab=31.22 E-value=89 Score=23.09 Aligned_cols=9 Identities=22% Similarity=0.146 Sum_probs=3.9
Q ss_pred hHHHHHHHH
Q 038413 129 DIAKCTIKV 137 (191)
Q Consensus 129 Dva~~~~~~ 137 (191)
|+++.+...
T Consensus 52 dl~~~ia~~ 60 (247)
T PRK09495 52 DLWAAIAKE 60 (247)
T ss_pred HHHHHHHHH
Confidence 444444443
No 401
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=31.09 E-value=90 Score=24.47 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=20.1
Q ss_pred CCHHHHHHhhccCcEEEEccCCCC
Q 038413 4 DEHEKIVSILKEVDVVISTVAYPQ 27 (191)
Q Consensus 4 ~d~~~l~~a~~g~d~V~~~~~~~~ 27 (191)
+-++.|.+|++|+|+|+--+|.+.
T Consensus 85 ~g~~~L~~al~~advVvIPAGVPR 108 (345)
T KOG1494|consen 85 TGADGLENALKGADVVVIPAGVPR 108 (345)
T ss_pred CChhHHHHHhcCCCEEEecCCCCC
Confidence 346789999999999999888753
No 402
>TIGR02804 ExbD_2 TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=30.50 E-value=1.6e+02 Score=19.33 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=16.8
Q ss_pred CcccHHHHHHHHHHcCCccEEE
Q 038413 27 QFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 27 ~~~~~~~li~aa~~~g~vkr~v 48 (191)
..+....++++|+++| ++++-
T Consensus 96 ~~~~vv~v~d~~~~~G-~~~v~ 116 (121)
T TIGR02804 96 KFQDFVTITDMLKAKE-HENVQ 116 (121)
T ss_pred CHhHHHHHHHHHHHcC-CCeEE
Confidence 3566788999999999 88863
No 403
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=30.26 E-value=94 Score=24.97 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=29.3
Q ss_pred HHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcCCccE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAGNIKR 46 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g~vkr 46 (191)
.+.+.++++++|.||.+++..+ .....-+.+.+++.+ +..
T Consensus 92 ~d~Ir~~le~~D~vfI~aglGGGTGSG~apvia~~ake~~-~l~ 134 (349)
T TIGR00065 92 RDEIRKLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELG-ALT 134 (349)
T ss_pred HHHHHHHHhCCCEEEEEEeccCccchhHHHHHHHHHHHcC-CCE
Confidence 4567888999999999888654 344566778888877 443
No 404
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=29.96 E-value=1.1e+02 Score=20.13 Aligned_cols=35 Identities=29% Similarity=0.508 Sum_probs=21.3
Q ss_pred hccCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEE
Q 038413 13 LKEVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v 48 (191)
+.|.|+++...-..+ ......+++|+++.| .+|+.
T Consensus 45 v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~-a~~i~ 83 (116)
T PF13793_consen 45 VRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAG-AKRIT 83 (116)
T ss_dssp -TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTT-BSEEE
T ss_pred ccCCceEEEEecCCchhHHHHHHHHHHHHHHHcC-CcEEE
Confidence 346676664333222 334577899999999 88865
No 405
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed
Probab=29.62 E-value=2.7e+02 Score=22.82 Aligned_cols=93 Identities=10% Similarity=0.017 Sum_probs=46.3
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC----cccCCcee
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND----PRTCNRIV 148 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~----~~~~~~~~ 148 (191)
.++-+.|++.|++.-++|+..+.-+....+.....+.+.+.+... +.... ...-+.+-+..++.+ +...+.++
T Consensus 275 ~eav~~lr~~G~kvg~l~i~~~~PfP~~~i~~~l~~~k~ViVvE~-n~~~G--q~g~l~~ev~~~l~~~~~~~~~~~~i~ 351 (390)
T PRK08366 275 KEAVDLLRKEGYKVGYAKVRWFRPFPKEELYEIAESVKGIAVLDR-NFSFG--QEGILFTEAKGALYNTDARPIMKNYIV 351 (390)
T ss_pred HHHHHHHHhcCCceeeEEEeeecCCCHHHHHHHHhcCCEEEEEeC-CCCCC--cccHHHHHHHHHHhccCCCCceeceEe
Confidence 344455666788887777766554221111111112234444431 11100 112333334444321 22345555
Q ss_pred EeecCCCccCHHHHHHHHHHHh
Q 038413 149 IYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 149 ~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
-++ +..+|..++.+++.+..
T Consensus 352 g~g--Gr~~t~~~i~~~~~~~~ 371 (390)
T PRK08366 352 GLG--GRDFTVNDVKAIAEDMK 371 (390)
T ss_pred CcC--CccCCHHHHHHHHHHHH
Confidence 564 79999999999888644
No 406
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 []. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A ....
Probab=29.20 E-value=1.3e+02 Score=22.12 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
||+.+.+.....+.++|+||...-....+-...|.+.+++...-.++|.
T Consensus 108 gdfl~~~~~~~~~s~AdvVf~Nn~~F~~~l~~~L~~~~~~lk~G~~IIs 156 (205)
T PF08123_consen 108 GDFLDPDFVKDIWSDADVVFVNNTCFDPDLNLALAELLLELKPGARIIS 156 (205)
T ss_dssp S-TTTHHHHHHHGHC-SEEEE--TTT-HHHHHHHHHHHTTS-TT-EEEE
T ss_pred cCccccHhHhhhhcCCCEEEEeccccCHHHHHHHHHHHhcCCCCCEEEE
Confidence 6888888888888999999875332232333445444443321135664
No 407
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4.1.1.48 from EC) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (5.3.1.24 from EC) (PRAI) activity (see IPR001240 from INTERPRO), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (2.4.2 from EC) (GATase) N-terminal domain (see IPR000991 from INTERPRO). A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand []. ; GO: 0004425 indole-3-glycerol-phosphate synthase activity; PDB: 1VC4_A 1PII_A 1JCM_P 1I4N_B 1J5T_A 3TSM_B 4FB7_A 3QJA_A 1JUL_A 2C3Z_A ....
Probab=29.04 E-value=1.2e+02 Score=23.24 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=32.2
Q ss_pred CHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
|+-.+.+| ..|+|+|...++.-.-+....+++.|+..| ..-+|
T Consensus 120 d~~QI~eA~~~GADaVLLI~~~L~~~~l~~l~~~a~~lG-le~lV 163 (254)
T PF00218_consen 120 DPYQIYEARAAGADAVLLIAAILSDDQLEELLELAHSLG-LEALV 163 (254)
T ss_dssp SHHHHHHHHHTT-SEEEEEGGGSGHHHHHHHHHHHHHTT--EEEE
T ss_pred CHHHHHHHHHcCCCEeehhHHhCCHHHHHHHHHHHHHcC-CCeEE
Confidence 45555555 469999999888776666689999999999 88777
No 408
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=28.95 E-value=2.8e+02 Score=21.62 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=51.5
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCCC-CCCCCCCchhhHHHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEED-RVRPLPPFEAYLEKKRIVRRA 78 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~~-~~~~~~~~~~~~~~k~~~e~~ 78 (191)
|.+.+.+|++ |++-|..=.+..+ +..++.+++.|++.| | -|-.+.|.-.. +..... ....+..-.++.++
T Consensus 89 ~~e~i~~ai~~GftSVM~DgS~lp~eeNi~~Trevv~~Ah~~g-v--~VEaElG~igg~ed~~~~-~~~~yT~peeA~~F 164 (285)
T PRK07709 89 SFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARN-V--SVEAELGTVGGQEDDVIA-EGVIYADPAECKHL 164 (285)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcC-C--EEEEEEeccCCccCCccc-ccccCCCHHHHHHH
Confidence 4566667775 7776654444332 566889999999998 5 23222222110 010000 01235556788899
Q ss_pred HHhcCCCeEEEecccccc
Q 038413 79 IEAVEIPYTFVSANCYGA 96 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~ 96 (191)
++++|++..-+..|..-+
T Consensus 165 v~~TgvD~LAvaiGt~HG 182 (285)
T PRK07709 165 VEATGIDCLAPALGSVHG 182 (285)
T ss_pred HHHhCCCEEEEeeccccc
Confidence 999999987776665444
No 409
>TIGR01096 3A0103s03R lysine-arginine-ornithine-binding periplasmic protein.
Probab=28.67 E-value=1e+02 Score=22.56 Aligned_cols=11 Identities=36% Similarity=0.395 Sum_probs=5.3
Q ss_pred hhHHHHHHHHh
Q 038413 128 EDIAKCTIKVI 138 (191)
Q Consensus 128 ~Dva~~~~~~l 138 (191)
-|+++.+...+
T Consensus 51 ~dl~~~i~~~l 61 (250)
T TIGR01096 51 VDLAKALCKRM 61 (250)
T ss_pred HHHHHHHHHHh
Confidence 35555554443
No 410
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=28.61 E-value=1.2e+02 Score=24.47 Aligned_cols=39 Identities=21% Similarity=0.303 Sum_probs=27.8
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
.+.+.+.++++|+|+.+.... .....+-++|.+.+ +..+
T Consensus 122 ~~~~~~~~~~~DlVid~~Dn~--~~r~~in~~~~~~~-iP~v 160 (370)
T PRK05600 122 AENAVELLNGVDLVLDGSDSF--ATKFLVADAAEITG-TPLV 160 (370)
T ss_pred HHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEE
Confidence 455667789999999987643 44445667899988 6544
No 411
>TIGR03855 NAD_NadX aspartate dehydrogenase. Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.
Probab=28.60 E-value=1.2e+02 Score=22.65 Aligned_cols=12 Identities=25% Similarity=0.609 Sum_probs=9.1
Q ss_pred ccCcEEEEccCC
Q 038413 14 KEVDVVISTVAY 25 (191)
Q Consensus 14 ~g~d~V~~~~~~ 25 (191)
.++|+|+-+++.
T Consensus 36 ~~vDaVviatp~ 47 (229)
T TIGR03855 36 EDVDIVVEAASQ 47 (229)
T ss_pred CCCCEEEECCCh
Confidence 468888887775
No 412
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=28.60 E-value=2e+02 Score=23.93 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=30.7
Q ss_pred CC-CCHHHHHHhhcc-CcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEc
Q 038413 2 EL-DEHEKIVSILKE-VDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 2 D~-~d~~~l~~a~~g-~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|+ .|++.++++++. ..+|| +-.+.+ +.....|.+.|++.| +.-++.
T Consensus 132 d~~~d~~~l~~~I~~~Tk~I~-~e~pgnP~~~v~Di~~I~~iA~~~g-i~livD 183 (432)
T PRK06702 132 NPNLTADEIVALANDKTKLVY-AESLGNPAMNVLNFKEFSDAAKELE-VPFIVD 183 (432)
T ss_pred CCCCCHHHHHHhCCcCCeEEE-EEcCCCccccccCHHHHHHHHHHcC-CEEEEE
Confidence 45 377889999864 34444 333333 224788999999999 766663
No 413
>cd02905 Macro_GDAP2_like Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family contains proteins similar to human GDAP2, the ganglioside induced differentiation associated protein 2, whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal
Probab=28.55 E-value=1.4e+02 Score=20.32 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=25.7
Q ss_pred cCcEEEEccCCCCc------------ccHHHHHHHHHHcCCccEEEcCC
Q 038413 15 EVDVVISTVAYPQF------------LDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 15 g~d~V~~~~~~~~~------------~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.+..|||++++... ...++.++.|.+.+ ++-+.+..
T Consensus 68 ~~k~VIH~vgP~~~~~~~~~~~~~L~~~~~~~L~~a~~~~-~~SIAfPa 115 (140)
T cd02905 68 PARFIIHTVGPKYNVKYRTAAENALYSCYRNVLQLAKELG-LESIALCV 115 (140)
T ss_pred CccEEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCEEEECC
Confidence 46899999987531 12367788888999 88876543
No 414
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=27.97 E-value=1.3e+02 Score=24.58 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHc-CCccEEE
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVA-GNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~-g~vkr~v 48 (191)
||.++.+.+.++ +.++|+|+.+.+.. .....+...+++. + ..+++
T Consensus 50 gd~~~~~~l~~~~~~~a~~vi~~~~~~--~~n~~~~~~~r~~~~-~~~ii 96 (453)
T PRK09496 50 GNGSSPDVLREAGAEDADLLIAVTDSD--ETNMVACQIAKSLFG-APTTI 96 (453)
T ss_pred eCCCCHHHHHHcCCCcCCEEEEecCCh--HHHHHHHHHHHHhcC-CCeEE
Confidence 577888889888 78999999987643 2233455666665 6 55555
No 415
>PTZ00023 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=27.82 E-value=69 Score=25.61 Aligned_cols=44 Identities=20% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 4 DEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 4 ~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.|+..+...-.|+|+|+-++|... .+....+..++| .++++.|+
T Consensus 79 ~dp~~lpW~~~gvDiVle~tG~~~---s~~~a~~~l~aG-ak~V~iSa 122 (337)
T PTZ00023 79 KDPAAIPWGKNGVDVVCESTGVFL---TKEKAQAHLKGG-AKKVIMSA 122 (337)
T ss_pred CChhhCCccccCCCEEEEecchhc---CHHHHHHHhhCC-CEEEEeCC
Confidence 355666555569999999988642 244566667789 88988765
No 416
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=27.63 E-value=2.2e+02 Score=23.53 Aligned_cols=47 Identities=9% Similarity=0.098 Sum_probs=30.7
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEc
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|..|.+.+.++++.-..++.+..+.+ ......|.+.|++.| +.-++.
T Consensus 135 d~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~g-i~livD 185 (433)
T PRK08134 135 KPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAG-VPLLVD 185 (433)
T ss_pred CCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcC-CEEEEE
Confidence 56688899999874333333333333 234678999999999 776663
No 417
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=27.14 E-value=1.6e+02 Score=21.60 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=26.8
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHc-CCccEEE
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVA-GNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~-g~vkr~v 48 (191)
+.+.+.++++|+|+.+.. +......+.+.|.+. + +.-+.
T Consensus 109 ~~~~~~~~~~DvVI~a~D--~~~~r~~l~~~~~~~~~-~p~I~ 148 (212)
T PRK08644 109 DNIEELFKDCDIVVEAFD--NAETKAMLVETVLEHPG-KKLVA 148 (212)
T ss_pred HHHHHHHcCCCEEEECCC--CHHHHHHHHHHHHHhCC-CCEEE
Confidence 455567889999999854 334445677888888 7 55444
No 418
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=27.00 E-value=88 Score=19.26 Aligned_cols=26 Identities=15% Similarity=0.031 Sum_probs=17.2
Q ss_pred eeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 147 IVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 147 ~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
.+.|.- +..+++.++.+.+++.++.+
T Consensus 12 tIaIrv-p~~~~y~~L~~ki~~kLkl~ 37 (80)
T cd06406 12 TVAIQV-ARGLSYATLLQKISSKLELP 37 (80)
T ss_pred EEEEEc-CCCCCHHHHHHHHHHHhCCC
Confidence 444553 56777777777777777664
No 419
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism]
Probab=26.98 E-value=1.5e+02 Score=23.60 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHcCCccEEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEE
Q 038413 30 DQLKIVHAIKVAGNIKRFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFV 89 (191)
Q Consensus 30 ~~~~li~aa~~~g~vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~til 89 (191)
-+.+.++.+++.| ++|.| +|.|..-.-.+ -..+-...++.+++ .+++|+++
T Consensus 141 lTEea~~qikkd~-v~r~VafsqYPQyS~sT--------sGSSln~l~r~~r~~~~~~~~~wsiI 196 (395)
T KOG1321|consen 141 LTEEALEQIKKDG-VTRAVAFSQYPQYSCST--------SGSSLNELWRQFREDGYERDIKWSII 196 (395)
T ss_pred ccHHHHHHHHhcC-ceeEEeeccCCceeeec--------CcccHHHHHHHHHhcCcccCCceEee
Confidence 3577889999999 99966 45443211111 11233455555554 46889887
No 420
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=26.90 E-value=1.6e+02 Score=22.25 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=27.2
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
.+.+.+.++++|+|+.+.... .....+-++|++.+ +..+
T Consensus 113 ~~~~~~~~~~~DiVi~~~D~~--~~r~~ln~~~~~~~-ip~v 151 (245)
T PRK05690 113 DDELAALIAGHDLVLDCTDNV--ATRNQLNRACFAAK-KPLV 151 (245)
T ss_pred HHHHHHHHhcCCEEEecCCCH--HHHHHHHHHHHHhC-CEEE
Confidence 445666788999999987633 44455778898888 5433
No 421
>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....
Probab=26.83 E-value=84 Score=21.85 Aligned_cols=43 Identities=23% Similarity=0.118 Sum_probs=27.6
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
|++.+...-.|+|+|+-|++.... ..-.+.-.++| +|+++.|.
T Consensus 78 dp~~i~W~~~gvDiVvEcTG~f~~---~~~~~~hl~~G-akkViisa 120 (151)
T PF00044_consen 78 DPEEIPWGELGVDIVVECTGKFRT---RENAEAHLDAG-AKKVIISA 120 (151)
T ss_dssp SGGGSTHHHHTESEEEETSSSTHS---HHHHTHHHHTT-ESEEEESS
T ss_pred hhcccccccccccEEEecccccee---ccccccccccc-ccceeecc
Confidence 455555555799999999986431 11222344568 99998654
No 422
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=26.82 E-value=4.2e+02 Score=22.88 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=27.4
Q ss_pred HHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+.+.++|+ |+|.||-..| .....++++..+.+ +++++
T Consensus 6 ~~lv~~L~~~GV~~VFGiPG----~~i~~~~dal~~~~-i~~I~ 44 (550)
T COG0028 6 EALVEALEANGVDTVFGIPG----GSILPLYDALYDSG-IRHIL 44 (550)
T ss_pred HHHHHHHHHcCCcEEEeCCC----ccHHHHHHHHHhCC-CcEEE
Confidence 55667774 8888888766 44567888888887 88775
No 423
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=26.76 E-value=1.5e+02 Score=24.25 Aligned_cols=46 Identities=17% Similarity=0.060 Sum_probs=33.2
Q ss_pred CCCHHHHHHhhc--cCcEEEEccCCCC--------------------cccHHHHHHHHHHcCCccEEEc
Q 038413 3 LDEHEKIVSILK--EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 3 ~~d~~~l~~a~~--g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
-.|++.+.++++ |+..|+..+=-.. .+....+.+||++.| ++--+.
T Consensus 80 ~fD~~~Wa~~~k~AGakY~vlTaKHHDGF~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~G-lk~G~Y 147 (384)
T smart00812 80 KFDPEEWADLFKKAGAKYVVLTAKHHDGFCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRG-LKFGLY 147 (384)
T ss_pred hCCHHHHHHHHHHcCCCeEEeeeeecCCccccCCCCCCCcccCCCCCcchHHHHHHHHHHcC-CeEEEE
Confidence 358888998886 7777765432110 356789999999999 988663
No 424
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=26.62 E-value=1.8e+02 Score=20.59 Aligned_cols=40 Identities=5% Similarity=0.127 Sum_probs=26.5
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHc-CCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVA-GNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~-g~vkr~v 48 (191)
.+.+.+.++++|+|+.+.. +...-..+.+.|.+. + +.-+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~d--~~~~r~~i~~~~~~~~~-ip~i~ 119 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFD--NAETKAMLAESLLGNKN-KPVVC 119 (174)
T ss_pred hhhHHHHhcCCCEEEECCC--CHHHHHHHHHHHHHHCC-CCEEE
Confidence 3456677889999999844 334445577777776 7 55443
No 425
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=26.43 E-value=1e+02 Score=24.84 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=28.5
Q ss_pred CCCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 2 ELDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 2 D~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
|..|.+.|.+.++ ++|.|+. ++.. .....+.+++++.| ++-+
T Consensus 12 ~~~d~~~l~~~~~~~~id~vi~--g~E~-~l~~~~~d~l~~~G-i~~~ 55 (379)
T PRK13790 12 SESDHQAILDFAKQQNVDWVVI--GPEQ-PLIDGLADILRANG-FKVF 55 (379)
T ss_pred CCCCHHHHHHHHHHhCCCEEEE--CCcH-HHHHHHHHHHHhCC-CcEE
Confidence 6788888888876 5677774 3222 23456788888888 7544
No 426
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=26.43 E-value=97 Score=21.04 Aligned_cols=17 Identities=35% Similarity=0.597 Sum_probs=14.2
Q ss_pred HHhhccCcEEEEccCCC
Q 038413 10 VSILKEVDVVISTVAYP 26 (191)
Q Consensus 10 ~~a~~g~d~V~~~~~~~ 26 (191)
.++++++|+|+.+++.+
T Consensus 64 ~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 64 YEALKDADIVVITAGVP 80 (141)
T ss_dssp GGGGTTESEEEETTSTS
T ss_pred ccccccccEEEEecccc
Confidence 35788999999999875
No 427
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=26.23 E-value=1.5e+02 Score=24.16 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.6
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
.+.+.+.++++|+|+.+.... .....+-++|.+.+ +..+
T Consensus 123 ~~~~~~~~~~~D~Vvd~~d~~--~~r~~ln~~~~~~~-~p~v 161 (392)
T PRK07878 123 PSNAVELFSQYDLILDGTDNF--ATRYLVNDAAVLAG-KPYV 161 (392)
T ss_pred hhHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CCEE
Confidence 344566789999999986532 33344668899988 6543
No 428
>cd03363 TOPRIM_TopoIA_TopoI TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to Escherichia coli DNA topoisomerase I. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=26.22 E-value=1.4e+02 Score=19.77 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=27.3
Q ss_pred HHHHHhhccCcEEEEccCCCCccc---HHHHHHHHHHcCCccEEEcCCc
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLD---QLKIVHAIKVAGNIKRFLPSEF 52 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~---~~~li~aa~~~g~vkr~v~s~~ 52 (191)
+.|.+.++++|-||++..... ++ ...+++.+.....|+|+-.|+.
T Consensus 64 ~~ik~l~~~~~eiiiAtD~dr-EGe~i~~~i~~~~~~~~~v~Rl~~ssl 111 (123)
T cd03363 64 KELKKLAKKADEIYLATDPDR-EGEAIAWHLAEVLKLKKNVKRVVFNEI 111 (123)
T ss_pred HHHHHHHhcCCEEEEcCCCCc-chHHHHHHHHHHcCCCCCeEEEEEccC
Confidence 345666678898888776532 22 2456666654333777766553
No 429
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=26.16 E-value=1.8e+02 Score=22.13 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=30.4
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
++-.+.++.. |+|+|...+..........+++.|+..| ..-++
T Consensus 122 ~~~qi~~a~~~GAD~VlLi~~~l~~~~l~~li~~a~~lG-l~~lv 165 (260)
T PRK00278 122 DPYQIYEARAAGADAILLIVAALDDEQLKELLDYAHSLG-LDVLV 165 (260)
T ss_pred CHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHHHHHHcC-CeEEE
Confidence 4556666664 9999877766544456678999998888 65554
No 430
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=26.06 E-value=1.5e+02 Score=21.75 Aligned_cols=36 Identities=11% Similarity=0.207 Sum_probs=20.0
Q ss_pred CCCCCHHHHHHhhc-cCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 1 GELDEHEKIVSILK-EVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~-g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
|.+.+.+++.++.+ |++.+++= + ....++++|++.|
T Consensus 65 GTVl~~~~a~~a~~aGA~FivsP-~-----~~~~v~~~~~~~~ 101 (204)
T TIGR01182 65 GTVLNPEQLRQAVDAGAQFIVSP-G-----LTPELAKHAQDHG 101 (204)
T ss_pred EeCCCHHHHHHHHHcCCCEEECC-C-----CCHHHHHHHHHcC
Confidence 34556666666654 66665331 1 1245677777766
No 431
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=26.02 E-value=85 Score=26.08 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=16.2
Q ss_pred HHHHHhhccCcEEEEccCCC
Q 038413 7 EKIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~ 26 (191)
.+..+|++|+|.||+..-..
T Consensus 66 tdr~eAl~gADfVi~~irvG 85 (437)
T cd05298 66 TDPEEAFTDADFVFAQIRVG 85 (437)
T ss_pred CCHHHHhCCCCEEEEEeeeC
Confidence 35778999999999987554
No 432
>PF10832 DUF2559: Protein of unknown function (DUF2559); InterPro: IPR022541 This family of proteins appear to be restricted to Proteobacteria. The sequences are annotated as YhfG however currently no function is known.
Probab=26.02 E-value=90 Score=17.45 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=20.5
Q ss_pred HHHHHHhCCceEEEEcCHHHHHHHhhhC
Q 038413 164 SLWEQKTGRSFKRVHISEEELVKLSQIL 191 (191)
Q Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 191 (191)
+.=.+.-|..++.+.++.|+....|.+|
T Consensus 21 QaS~rLeG~~~~~vtL~~e~a~~RL~eL 48 (54)
T PF10832_consen 21 QASRRLEGVTIPLVTLTAEQALARLEEL 48 (54)
T ss_pred HHHHhhcCCCCcceeccHHHHHHHHHHH
Confidence 3344556888889999999888777653
No 433
>PRK07877 hypothetical protein; Provisional
Probab=26.00 E-value=1.7e+02 Score=26.12 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=30.0
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+.+.+.+.++++|+|+.+.... +.-..+-++|.+.| +.-+.
T Consensus 186 ~~~n~~~~l~~~DlVvD~~D~~--~~R~~ln~~a~~~~-iP~i~ 226 (722)
T PRK07877 186 TEDNVDAFLDGLDVVVEECDSL--DVKVLLREAARARR-IPVLM 226 (722)
T ss_pred CHHHHHHHhcCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 4677888889999999988743 44345668899988 65444
No 434
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=25.96 E-value=2.2e+02 Score=23.38 Aligned_cols=46 Identities=17% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCCCHHHHHHhhc-cCcEEEEc-cCCCC--cccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILK-EVDVVIST-VAYPQ--FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~-g~d~V~~~-~~~~~--~~~~~~li~aa~~~g~vkr~v 48 (191)
|-.|++++.+++. +--+||.= .+.+. +.....+.+.|+++| |.-+|
T Consensus 133 d~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~g-vpliV 182 (426)
T COG2873 133 DPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHG-VPLIV 182 (426)
T ss_pred CCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcC-CcEEE
Confidence 6678999999997 45555532 23222 455688999999999 87776
No 435
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=25.92 E-value=1.2e+02 Score=20.63 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=17.1
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.+-+.+.+.+|.++++.-.+.+++.+.+..
T Consensus 59 ~ie~~l~~~fG~~v~v~vrs~~el~~i~~~ 88 (137)
T PF08002_consen 59 KIEKALEERFGFDVPVIVRSAEELRAIIAA 88 (137)
T ss_dssp HHHHHHHHH-TT---EEEEEHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEeeHHHHHHHHHH
Confidence 444555566677777777788887776653
No 436
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=25.86 E-value=76 Score=26.00 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=19.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP 26 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~ 26 (191)
+|+++.+++.++++ +.|+++|+++..
T Consensus 110 ~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 110 GDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 57888777766653 479999988765
No 437
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=25.51 E-value=1.6e+02 Score=23.85 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=27.4
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+.+.+.++++|+|+++.... .....+-++|++.+ +..+.
T Consensus 217 ~~~~~~~~~~D~Vv~~~d~~--~~r~~ln~~~~~~~-ip~i~ 255 (376)
T PRK08762 217 DNVEALLQDVDVVVDGADNF--PTRYLLNDACVKLG-KPLVY 255 (376)
T ss_pred HHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 45566778999999987643 33345678899998 65544
No 438
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....
Probab=25.51 E-value=1.9e+02 Score=18.55 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=23.7
Q ss_pred HHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 9 IVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 9 l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
+.+.+. +.|+|+-+++. +.....+..+.++| +++|..+
T Consensus 51 ~~~~~~~~~~dvvVE~t~~---~~~~~~~~~~L~~G--~~VVt~n 90 (117)
T PF03447_consen 51 LEELIDDPDIDVVVECTSS---EAVAEYYEKALERG--KHVVTAN 90 (117)
T ss_dssp HHHHHTHTT-SEEEE-SSC---HHHHHHHHHHHHTT--CEEEES-
T ss_pred HHHHhcCcCCCEEEECCCc---hHHHHHHHHHHHCC--CeEEEEC
Confidence 444455 79999999543 45566777777888 5777543
No 439
>PRK00055 ribonuclease Z; Reviewed
Probab=25.37 E-value=2.5e+02 Score=20.88 Aligned_cols=48 Identities=19% Similarity=0.319 Sum_probs=31.0
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCCc----------ccHHHHHHHHHHcCCccEEEcC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQF----------LDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~~----------~~~~~li~aa~~~g~vkr~v~s 50 (191)
|-.-.+.+.+.++++|.+++=+..... -.....++.+++.+ +|++++.
T Consensus 174 Dt~~~~~~~~~~~~~d~li~E~~~~~~~~~~~~~~~H~~~~~a~~~~~~~~-~~~~vl~ 231 (270)
T PRK00055 174 DTRPCEALVELAKGADLLVHEATFGDEDEELAKEYGHSTARQAAEIAKEAG-VKRLILT 231 (270)
T ss_pred CCCCcHHHHHHhCCCCEEEEeccCCcchhhHHhhcCCCCHHHHHHHHHHcC-CCEEEEE
Confidence 433345566777899999886554321 12345677788888 8998864
No 440
>PRK10204 hypothetical protein; Provisional
Probab=25.26 E-value=74 Score=17.62 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=19.4
Q ss_pred HHHHHhCCceEEEEcCHHHHHHHhhhC
Q 038413 165 LWEQKTGRSFKRVHISEEELVKLSQIL 191 (191)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~ 191 (191)
.-.+.-|..++.+.++.|+....|.+|
T Consensus 23 aS~RLeG~~~p~vtlt~eeA~aRl~~L 49 (55)
T PRK10204 23 ASRRLEGVEMPLVTLTAEEALARLEEL 49 (55)
T ss_pred HHhhhcCcccccccccHHHHHHHHHHH
Confidence 334556788888888888887776653
No 441
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=24.98 E-value=3.4e+02 Score=21.18 Aligned_cols=89 Identities=11% Similarity=0.070 Sum_probs=52.2
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCCCC-CCCCCC--chhhHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEEDR-VRPLPP--FEAYLEKKRIVR 76 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~-~~~~~~--~~~~~~~k~~~e 76 (191)
+.+.+.+|++ |++-|..=.+..+ +..++.+++.|+..| | -|-.+.|.-... ...... ....+..-.++.
T Consensus 85 ~~e~i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~ah~~g-v--~VEaElG~i~g~ed~~~~~~~~~~~~TdP~~a~ 161 (287)
T PF01116_consen 85 DFEDIKRAIDAGFTSVMIDGSALPFEENIAITREVVEYAHAYG-V--SVEAELGHIGGKEDGIESEEETESLYTDPEEAK 161 (287)
T ss_dssp SHHHHHHHHHHTSSEEEEE-TTS-HHHHHHHHHHHHHHHHHTT----EEEEEESBSSSSCTTCSSSTT-TTCSSSHHHHH
T ss_pred CHHHHHHHHHhCcccccccCCcCCHHHHHHHHHHHHHhhhhhC-C--EEEEEeeeeeccCCCccccccccccccCHHHHH
Confidence 5667777875 8887765555443 566888999999998 4 232222221110 000000 123455567888
Q ss_pred HHHHhcCCCeEEEecccccc
Q 038413 77 RAIEAVEIPYTFVSANCYGA 96 (191)
Q Consensus 77 ~~l~~~~~~~tilrp~~~~~ 96 (191)
++++++|+++.-+..|...+
T Consensus 162 ~Fv~~TgvD~LAvaiGt~HG 181 (287)
T PF01116_consen 162 EFVEETGVDALAVAIGTAHG 181 (287)
T ss_dssp HHHHHHTTSEEEE-SSSBSS
T ss_pred HHHHHhCCCEEEEecCcccc
Confidence 99999999997777665444
No 442
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=24.91 E-value=94 Score=25.53 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=31.4
Q ss_pred CCCCHH-HHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCc
Q 038413 2 ELDEHE-KIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEF 52 (191)
Q Consensus 2 D~~d~~-~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~ 52 (191)
|+.+++ .|.+..+..|.|+++.+..- -..+.++|.... ++.+.|+|
T Consensus 54 dv~~~~~~L~~~v~~~D~viSLlP~t~---h~lVaK~~i~~~--~~~vtsSy 100 (445)
T KOG0172|consen 54 DVADEELALRKEVKPLDLVISLLPYTF---HPLVAKGCIITK--EDSVTSSY 100 (445)
T ss_pred EccchHHHHHhhhcccceeeeeccchh---hHHHHHHHHHhh--cccccccc
Confidence 677777 88888899999999987642 234555665553 55555544
No 443
>PRK02126 ribonuclease Z; Provisional
Probab=24.88 E-value=1.7e+02 Score=23.23 Aligned_cols=42 Identities=26% Similarity=0.434 Sum_probs=29.8
Q ss_pred HHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEcC
Q 038413 8 KIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~s 50 (191)
.+.+.++|+|.+||=+.... -.....+.+.|+++| +++++++
T Consensus 260 ~l~~~a~~aDlLI~Eat~~~~~~~~a~~~gH~t~~~a~~lA~~a~-vk~LvLt 311 (334)
T PRK02126 260 RIVELAAGVDLLFIEAVFLDEDAEKARRKNHLTARQAGRLAREAG-VKRLLPF 311 (334)
T ss_pred HHHHHHcCCCEEEEEcccChHHhhhcccCCCCCHHHHHHHHHHcC-CCEEEEE
Confidence 46677789999999766542 112355688888899 9998854
No 444
>PRK06418 transcription elongation factor NusA-like protein; Validated
Probab=24.70 E-value=1.5e+02 Score=21.05 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=40.3
Q ss_pred hHHHHHHHHhcCc-----------ccCCceeEeecCCCccCH---HHHHHHHHHHhCCceEEEEc--CHHHHHHHh
Q 038413 129 DIAKCTIKVINDP-----------RTCNRIVIYRPQTNIISQ---LELISLWEQKTGRSFKRVHI--SEEELVKLS 188 (191)
Q Consensus 129 Dva~~~~~~l~~~-----------~~~~~~~~i~~~~~~~t~---~e~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 188 (191)
|+.++++.+.+++ +..++.+++..+++.+.+ .+.++.+++.+|++++++.. ++++|.+.+
T Consensus 34 ~i~~~l~~l~~~~~l~~~~~~k~~~~ddrvIfvV~~gdg~aIGk~G~~ik~l~~~lgk~VevVE~s~d~~~fl~Nl 109 (166)
T PRK06418 34 EVSKVLLKLEEDKELKDVEYKKAYEVDDLVILLVTSGPRIPIGKGGKIAKALSRKLGKKVRVVEKTNDIKKLAVQL 109 (166)
T ss_pred HHHHHHHHhhccccccCceEEEEEEeCCEEEEEEeCCCcccccccchHHHHHHHHhCCcEEEEEcCCCHHHHHHhc
Confidence 6788888876652 123566665432333333 38999999999999999986 567776654
No 445
>PRK05529 cell division protein FtsQ; Provisional
Probab=24.50 E-value=2.2e+02 Score=21.68 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=35.3
Q ss_pred CcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 140 DPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 140 ~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.|-..=+.+.+.| .+.+|..|+.+.+....|.+ +..++.+++++.+++
T Consensus 58 Sp~~~v~~I~V~G-n~~vs~~eI~~~~~~~~g~~--l~~vd~~~~~~~l~~ 105 (255)
T PRK05529 58 SPLLALRSIEVAG-NMRVKPQDIVAALRDQFGKP--LPLVDPETVRKKLAA 105 (255)
T ss_pred CCceEEEEEEEEC-CccCCHHHHHHHhcccCCCc--ceeECHHHHHHHHhc
Confidence 4533336678885 67899999999988778877 466788888777654
No 446
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=24.50 E-value=3.4e+02 Score=21.14 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=50.9
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCCC-CCCCCCCchhhHHHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEED-RVRPLPPFEAYLEKKRIVRRA 78 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~~-~~~~~~~~~~~~~~k~~~e~~ 78 (191)
+.+.+.+|++ |++.|..=.+..+ +..++.+++.|+..| +. |-.+.|.-.. +..... ....+..-.++.++
T Consensus 86 ~~e~i~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~g-v~--VEaElG~vgg~ed~~~~-~~~~~T~pe~a~~F 161 (283)
T PRK07998 86 TFEDVKQAVRAGFTSVMIDGAALPFEENIAFTKEAVDFAKSYG-VP--VEAELGAILGKEDDHVS-EADCKTEPEKVKDF 161 (283)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcC-CE--EEEEeccCCCccccccc-cccccCCHHHHHHH
Confidence 5567777775 8888765444332 566788999999999 64 3222222110 000000 01223344667888
Q ss_pred HHhcCCCeEEEecccccc
Q 038413 79 IEAVEIPYTFVSANCYGA 96 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~ 96 (191)
++++|.++.-+..|...+
T Consensus 162 v~~TgvD~LAvaiGt~HG 179 (283)
T PRK07998 162 VERTGCDMLAVSIGNVHG 179 (283)
T ss_pred HHHhCcCeeehhcccccc
Confidence 888999876666554443
No 447
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=24.44 E-value=1.9e+02 Score=20.94 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=29.6
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcc
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFG 53 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g 53 (191)
+...+.+.++|+|+.+... ......+-+.|++.+ +.-+..+.+|
T Consensus 105 ~~~~~~~~~~dvVi~~~d~--~~~~~~ln~~c~~~~-ip~i~~~~~G 148 (198)
T cd01485 105 SNIEEYLQKFTLVIATEEN--YERTAKVNDVCRKHH-IPFISCATYG 148 (198)
T ss_pred hhHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEeec
Confidence 3445567899999987553 345566778999999 7665544433
No 448
>PLN02358 glyceraldehyde-3-phosphate dehydrogenase
Probab=24.15 E-value=99 Score=24.74 Aligned_cols=42 Identities=19% Similarity=0.078 Sum_probs=28.1
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s 50 (191)
|++.+.-.-.|+|+||-++|... .+.......++| .++++.|
T Consensus 85 ~p~~~~w~~~gvDiVie~tG~~~---s~~~a~~hl~aG-ak~ViiS 126 (338)
T PLN02358 85 NPEDIPWGEAGADFVVESTGVFT---DKDKAAAHLKGG-AKKVVIS 126 (338)
T ss_pred CcccCcccccCCCEEEEcccchh---hHHHHHHHHHCC-CEEEEeC
Confidence 44444432359999999988642 344556666789 8888866
No 449
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=23.96 E-value=1.5e+02 Score=23.71 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=24.2
Q ss_pred hhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 12 ILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 12 a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
++.++|+||.+++. +....++.++.++| +++|.
T Consensus 65 ~~~~vD~Vf~alP~---~~~~~~v~~a~~aG--~~VID 97 (343)
T PRK00436 65 ILAGADVVFLALPH---GVSMDLAPQLLEAG--VKVID 97 (343)
T ss_pred HhcCCCEEEECCCc---HHHHHHHHHHHhCC--CEEEE
Confidence 45789999998764 45567788887788 46763
No 450
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion]
Probab=23.95 E-value=4.2e+02 Score=21.94 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=44.3
Q ss_pred CCceEEEecC-CcceeeecchhhHHHHHHHHh-cCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 108 PHDDVVVYGN-GEAKAVFNYEEDIAKCTIKVI-NDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 108 ~~~~~~~~~~-g~~~~~~i~~~Dva~~~~~~l-~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
.++.+.+.|. |-.|.. =+|+.++... ......-..+.+. .-.+--.|.++.+++.+|.+++.+. ++++|.
T Consensus 202 ~~~vi~LVGPTGVGKTT-----TlAKLAar~~~~~~~~kVaiITtD--tYRIGA~EQLk~Ya~im~vp~~vv~-~~~el~ 273 (407)
T COG1419 202 QKRVIALVGPTGVGKTT-----TLAKLAARYVMLKKKKKVAIITTD--TYRIGAVEQLKTYADIMGVPLEVVY-SPKELA 273 (407)
T ss_pred cCcEEEEECCCCCcHHH-----HHHHHHHHHHhhccCcceEEEEec--cchhhHHHHHHHHHHHhCCceEEec-CHHHHH
Confidence 3566667663 433322 2445444444 3322111222222 3556667999999999999988754 888888
Q ss_pred HHhhh
Q 038413 186 KLSQI 190 (191)
Q Consensus 186 ~~~~~ 190 (191)
..+..
T Consensus 274 ~ai~~ 278 (407)
T COG1419 274 EAIEA 278 (407)
T ss_pred HHHHH
Confidence 77764
No 451
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=23.75 E-value=92 Score=25.34 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=21.9
Q ss_pred hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 13 LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
++++|+||.+++. +...+++.++ +.| .++|
T Consensus 102 ~~~~DvVf~Alp~---~~s~~i~~~~-~~g--~~VI 131 (381)
T PLN02968 102 FSDVDAVFCCLPH---GTTQEIIKAL-PKD--LKIV 131 (381)
T ss_pred hcCCCEEEEcCCH---HHHHHHHHHH-hCC--CEEE
Confidence 6899999998764 4567788876 466 3566
No 452
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=23.70 E-value=1.9e+02 Score=21.38 Aligned_cols=14 Identities=0% Similarity=-0.213 Sum_probs=9.8
Q ss_pred hcCCCeEEEecccc
Q 038413 81 AVEIPYTFVSANCY 94 (191)
Q Consensus 81 ~~~~~~tilrp~~~ 94 (191)
+.|.+|.-+-|...
T Consensus 127 ~~Gad~vklFPa~~ 140 (213)
T PRK06552 127 EAGSEIVKLFPGST 140 (213)
T ss_pred HcCCCEEEECCccc
Confidence 37889888866443
No 453
>PHA02105 hypothetical protein
Probab=23.59 E-value=1.3e+02 Score=17.23 Aligned_cols=30 Identities=27% Similarity=0.230 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhCC-ceEEEEcCHHHHHHHhh
Q 038413 160 LELISLWEQKTGR-SFKRVHISEEELVKLSQ 189 (191)
Q Consensus 160 ~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 189 (191)
.|+++-+..+.-. +++++.+|.+++...|.
T Consensus 26 ~e~~~ql~svfsipqi~yvyls~~e~~si~p 56 (68)
T PHA02105 26 LELFDQLKTVFSIPQIKYVYLSYEEFNSIMP 56 (68)
T ss_pred HHHHHHHHHhccccceEEEEEeHHHhccccc
Confidence 3555555666654 58999999999977653
No 454
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=23.41 E-value=3.3e+02 Score=20.53 Aligned_cols=20 Identities=25% Similarity=0.110 Sum_probs=16.2
Q ss_pred ccHHHHHHHHHHcCCccEEEc
Q 038413 29 LDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 29 ~~~~~li~aa~~~g~vkr~v~ 49 (191)
+....++++|.+.| |+.+-.
T Consensus 37 ~~~~~i~~~c~~~G-I~~lT~ 56 (230)
T PRK14837 37 KRAKEIVKHSLKLG-IKYLSL 56 (230)
T ss_pred HHHHHHHHHHHHcC-CCEEEE
Confidence 44688999999999 998653
No 455
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=23.36 E-value=1.2e+02 Score=18.62 Aligned_cols=21 Identities=14% Similarity=-0.042 Sum_probs=14.3
Q ss_pred CCccCHHHHHHHHHHHhCCce
Q 038413 154 TNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+...++.++.+++++++..+.
T Consensus 14 ~~g~~y~~L~~~ls~kL~l~~ 34 (78)
T cd06411 14 PRGADVSSLRALLSQALPQQA 34 (78)
T ss_pred cCCCCHHHHHHHHHHHhcCCh
Confidence 466777777777777776543
No 456
>COG1744 Med Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [General function prediction only]
Probab=23.34 E-value=1.8e+02 Score=23.35 Aligned_cols=28 Identities=18% Similarity=0.156 Sum_probs=20.2
Q ss_pred ccCcEEEEccCCCCcccHHHHHHHHHHcCCccE
Q 038413 14 KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKR 46 (191)
Q Consensus 14 ~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr 46 (191)
+|+|+|++.++..... ++++|++.| ...
T Consensus 219 ~GaDVI~~~ag~~~~g----v~~~A~~~~-~~~ 246 (345)
T COG1744 219 QGADVIYPAAGGTGVG----VFQAAKELG-AYA 246 (345)
T ss_pred cCCCEEEecCCCCcch----HHHHHHHhC-CCe
Confidence 4999999998865432 444788888 655
No 457
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=23.23 E-value=1e+02 Score=25.52 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=16.2
Q ss_pred HHHHHhhccCcEEEEccCCC
Q 038413 7 EKIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~ 26 (191)
.+.++|++|+|.||+.+-..
T Consensus 66 tD~~~Al~gADfVi~~irvG 85 (425)
T cd05197 66 MDLEDAIIDADFVINQFRVG 85 (425)
T ss_pred CCHHHHhCCCCEEEEeeecC
Confidence 35788999999999987554
No 458
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=23.21 E-value=1.2e+02 Score=19.75 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=23.7
Q ss_pred hhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 12 ILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 12 a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.+.++|+||.+++. .....+..++.+.| + ++|.
T Consensus 63 ~~~~~Dvvf~a~~~---~~~~~~~~~~~~~g-~-~ViD 95 (121)
T PF01118_consen 63 ELSDVDVVFLALPH---GASKELAPKLLKAG-I-KVID 95 (121)
T ss_dssp HHTTESEEEE-SCH---HHHHHHHHHHHHTT-S-EEEE
T ss_pred HhhcCCEEEecCch---hHHHHHHHHHhhCC-c-EEEe
Confidence 45899999998763 44567788888899 6 5664
No 459
>PF10154 DUF2362: Uncharacterized conserved protein (DUF2362); InterPro: IPR019311 This is a family of proteins conserved from nematodes to humans. The function is not known.
Probab=23.15 E-value=95 Score=26.38 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=27.6
Q ss_pred hccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEE
Q 038413 13 LKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v 48 (191)
+.++.+|||+..... ..+.+|+++.|-+.+ |.-+-
T Consensus 385 l~~~~vvfhlv~d~~~~~~~~~~r~~~~~glrnil~~~~~~~-i~t~~ 431 (510)
T PF10154_consen 385 LSDVHVVFHLVVDDSLRSSNINSRHPIILGLRNILRTASRYD-ITTLT 431 (510)
T ss_pred cccceEEEEEEecCccccCCCCCcChHHHHHHHHHHHHHHcC-CCeee
Confidence 456899999987542 457899999999999 87654
No 460
>PRK11579 putative oxidoreductase; Provisional
Probab=23.07 E-value=1.2e+02 Score=24.06 Aligned_cols=40 Identities=10% Similarity=0.138 Sum_probs=27.1
Q ss_pred HHHHhhc--cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILK--EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~--g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~vkr~v 48 (191)
++++.++ ++|+|+.+.+... .+....|+++|+++| ++-.+
T Consensus 55 ~~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~a~~~g-~~l~v 120 (346)
T PRK11579 55 EPQHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSAG-RVLSV 120 (346)
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHhC-CEEEE
Confidence 4555564 6899998876531 234578899999988 65443
No 461
>TIGR03227 PhnS 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein. This ABC transporter periplasmic substrate binding protein component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238). The protein contains a match to pfam01547 for the "Bacterial extracellular solute-binding protein" domain.
Probab=23.03 E-value=3.9e+02 Score=21.29 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 159 QLELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 159 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
..++++.+++.+|.++.++..+..++..++
T Consensus 54 ~~~i~~~Fe~~~Gi~V~~~~~~s~~~~~rl 83 (367)
T TIGR03227 54 YQDQFDAFEKAEGIKVNIVEAGGGEVVERA 83 (367)
T ss_pred HHHHHHHHHHHHCCEEEEEeCChHHHHHHH
Confidence 467788888888888888877766655544
No 462
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=23.02 E-value=30 Score=19.95 Aligned_cols=49 Identities=8% Similarity=0.068 Sum_probs=25.8
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
.+.+.|.++...++ ...|..|+++.+.+.++.+.....-+..+|...|.
T Consensus 14 ~Ln~~a~~Iw~~~~---------------g~~t~~ei~~~l~~~y~~~~~~~~~dv~~fl~~L~ 62 (68)
T PF05402_consen 14 TLNETAAFIWELLD---------------GPRTVEEIVDALAEEYDVDPEEAEEDVEEFLEQLR 62 (68)
T ss_dssp ---THHHHHHHH-----------------SSS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHcc---------------CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 66777777766553 23678888888888887654433334445544443
No 463
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=23.01 E-value=3.7e+02 Score=20.99 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=50.8
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCC-CCCCCCCCchhhHHHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEE-DRVRPLPPFEAYLEKKRIVRRA 78 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~-~~~~~~~~~~~~~~~k~~~e~~ 78 (191)
|.+.+.+|++ |++-|..=.+..+ +..++.+++.|+..| + -|-.+.|.-. .+..... ....+..-.+++++
T Consensus 89 ~~e~i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~g-v--~VEaElG~vgg~ed~~~~-~~~~yT~peea~~F 164 (286)
T PRK08610 89 SFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKG-V--SVEAELGTVGGQEDDVVA-DGIIYADPKECQEL 164 (286)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcC-C--EEEEEEeccCCccCCCCC-cccccCCHHHHHHH
Confidence 4566667775 7776655444332 566788999999988 5 2322222211 0010000 11234455788888
Q ss_pred HHhcCCCeEEEecccccc
Q 038413 79 IEAVEIPYTFVSANCYGA 96 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~ 96 (191)
++++|+++.-+..|..-+
T Consensus 165 v~~TgvD~LAvaiGt~HG 182 (286)
T PRK08610 165 VEKTGIDALAPALGSVHG 182 (286)
T ss_pred HHHHCCCEEEeecccccc
Confidence 999999987776665444
No 464
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=23.00 E-value=1.7e+02 Score=21.38 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHhhc-cCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 1 GELDEHEKIVSILK-EVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~-g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
|.+.+.+.+++|.+ |++.+++= + ....+++.|++.+
T Consensus 65 GTV~~~e~a~~a~~aGA~FivSP-~-----~~~~v~~~~~~~~ 101 (196)
T PF01081_consen 65 GTVLTAEQAEAAIAAGAQFIVSP-G-----FDPEVIEYAREYG 101 (196)
T ss_dssp ES--SHHHHHHHHHHT-SEEEES-S-------HHHHHHHHHHT
T ss_pred EeccCHHHHHHHHHcCCCEEECC-C-----CCHHHHHHHHHcC
Confidence 34566666666664 67766551 1 1255777777777
No 465
>KOG1301 consensus Vesicle trafficking protein Sly1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.92 E-value=1.1e+02 Score=26.05 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=26.9
Q ss_pred CcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 16 VDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 16 ~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.++|+..+|..+...-.|+.+.+++.+.+||+++
T Consensus 563 ~eaIVFvVGGGNYiEYqnL~d~~krq~~~krIiY 596 (621)
T KOG1301|consen 563 QEAIVFVVGGGNYIEYQNLVDLAKRQQTVKRIIY 596 (621)
T ss_pred hheEEEEEcCcCeeehhhHHHHHHhhcccceeEe
Confidence 3777777887776667999999998875688983
No 466
>PRK06720 hypothetical protein; Provisional
Probab=22.90 E-value=1e+02 Score=21.64 Aligned_cols=33 Identities=6% Similarity=0.064 Sum_probs=14.5
Q ss_pred CcEEEEccCCCCcccHHHHHHHHH-HcCCccEEE
Q 038413 16 VDVVISTVAYPQFLDQLKIVHAIK-VAGNIKRFL 48 (191)
Q Consensus 16 ~d~V~~~~~~~~~~~~~~li~aa~-~~g~vkr~v 48 (191)
.+..+.............+++.+. +.|.+.-+|
T Consensus 65 ~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilV 98 (169)
T PRK06720 65 GEALFVSYDMEKQGDWQRVISITLNAFSRIDMLF 98 (169)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 344344344444444455555443 333244444
No 467
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=22.88 E-value=63 Score=19.19 Aligned_cols=13 Identities=15% Similarity=0.013 Sum_probs=5.3
Q ss_pred cchhhHHHHHHHH
Q 038413 125 NYEEDIAKCTIKV 137 (191)
Q Consensus 125 i~~~Dva~~~~~~ 137 (191)
+...|+..++...
T Consensus 13 ~~~~~iv~~i~~~ 25 (74)
T PF03880_consen 13 LTPRDIVGAICNE 25 (74)
T ss_dssp --HHHHHHHHHTC
T ss_pred CCHHHHHHHHHhc
Confidence 4445554444444
No 468
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=22.74 E-value=1.9e+02 Score=21.20 Aligned_cols=15 Identities=0% Similarity=-0.350 Sum_probs=10.2
Q ss_pred hcCCCeEEEeccccc
Q 038413 81 AVEIPYTFVSANCYG 95 (191)
Q Consensus 81 ~~~~~~tilrp~~~~ 95 (191)
+.|.+.+-+-|+...
T Consensus 115 ~~Ga~~vK~FPa~~~ 129 (201)
T PRK06015 115 EEGYTVLKFFPAEQA 129 (201)
T ss_pred HCCCCEEEECCchhh
Confidence 368888777776444
No 469
>PF07075 DUF1343: Protein of unknown function (DUF1343); InterPro: IPR008302 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.52 E-value=1.6e+02 Score=23.84 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=26.0
Q ss_pred HHhhccCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEEc
Q 038413 10 VSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 10 ~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.+-++|+|+++.=.=..+ +-....+++||.++| ++-+|+
T Consensus 73 ~~mL~~vDvlvfDiQDvG~R~YTYi~Tl~~~MeAaa~~g-~~vvVL 117 (365)
T PF07075_consen 73 PEMLKGVDVLVFDIQDVGVRFYTYISTLYYVMEAAAENG-KPVVVL 117 (365)
T ss_pred HHHHhCCCEEEEeCccCCchHHHHHHHHHHHHHHHHHhC-CeEEEE
Confidence 345679997765443222 233577899999999 877774
No 470
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=22.50 E-value=3.7e+02 Score=20.83 Aligned_cols=89 Identities=12% Similarity=0.093 Sum_probs=52.5
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCC-CCCCCCCCchhhHHHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEE-DRVRPLPPFEAYLEKKRIVRRA 78 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~-~~~~~~~~~~~~~~~k~~~e~~ 78 (191)
|.+.+.+|++ |++-|..=++..+ +..++.+++.|++.| | -|-.+.|.-. .+...... ...+..-.+++++
T Consensus 81 ~~~~i~~ai~~GftSVMiD~S~l~~eeNi~~t~~vv~~ah~~g-v--~VEaElG~i~g~e~~~~~~-~~~~T~pe~a~~F 156 (276)
T cd00947 81 SFELIKRAIRAGFSSVMIDGSHLPFEENVAKTKEVVELAHAYG-V--SVEAELGRIGGEEDGVVGD-EGLLTDPEEAEEF 156 (276)
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcC-C--eEEEEEeeecCccCCcccc-cccCCCHHHHHHH
Confidence 5667777775 7777765455433 566788999999998 5 2322222110 00000000 1234455788889
Q ss_pred HHhcCCCeEEEeccccccc
Q 038413 79 IEAVEIPYTFVSANCYGAY 97 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~~ 97 (191)
++++|+++.-+..|...+.
T Consensus 157 v~~TgvD~LAvsiGt~HG~ 175 (276)
T cd00947 157 VEETGVDALAVAIGTSHGA 175 (276)
T ss_pred HHHHCCCEEEeccCccccc
Confidence 9999999877776655543
No 471
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=22.37 E-value=1.7e+02 Score=23.38 Aligned_cols=45 Identities=16% Similarity=0.006 Sum_probs=28.5
Q ss_pred CCHHHHHHhhc--cCcEEEEccCCCC--------------------cccHHHHHHHHHHcCCccEEEc
Q 038413 4 DEHEKIVSILK--EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 4 ~d~~~l~~a~~--g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.|++.+.++++ |+-.|+..+=-.. .+....+.+||++.| +|.-+.
T Consensus 91 fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~G-lk~G~Y 157 (346)
T PF01120_consen 91 FDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYG-LKFGLY 157 (346)
T ss_dssp --HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT--EEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcC-CeEEEE
Confidence 47888888886 7766665432110 355788999999999 988664
No 472
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=22.30 E-value=1.2e+02 Score=19.98 Aligned_cols=17 Identities=35% Similarity=0.349 Sum_probs=10.6
Q ss_pred CccCHHHHHHHHHHHhC
Q 038413 155 NIISQLELISLWEQKTG 171 (191)
Q Consensus 155 ~~~t~~e~~~~~~~~~g 171 (191)
+..|..++.+.+.+.-.
T Consensus 68 ~~~~~~el~~~i~~lN~ 84 (117)
T PF00763_consen 68 EDISEEELLELIEKLNE 84 (117)
T ss_dssp TTSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHhC
Confidence 56666666666666553
No 473
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=22.21 E-value=1.4e+02 Score=23.33 Aligned_cols=41 Identities=17% Similarity=0.325 Sum_probs=27.4
Q ss_pred HHHHHhhc--cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILK--EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~--g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~vkr~v 48 (191)
.++++.++ ++|+|+.+++... .+....|+++|+++| ++-.+
T Consensus 57 ~~~~~ll~~~~iD~V~Iatp~~~H~e~~~~AL~aGkhVl~EKPla~t~~ea~~l~~~a~~~~-~~l~v 123 (342)
T COG0673 57 TDLEELLADPDIDAVYIATPNALHAELALAALEAGKHVLCEKPLALTLEEAEELVELARKAG-VKLMV 123 (342)
T ss_pred CCHHHHhcCCCCCEEEEcCCChhhHHHHHHHHhcCCEEEEcCCCCCCHHHHHHHHHHHHHcC-Cceee
Confidence 34556665 4799998776531 244578888898888 65544
No 474
>TIGR03025 EPS_sugtrans exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Certain closely related transferase enzymes such as Sinorhizobium ExoY and Lactococcus EpsD lack the N-terminal domain and are not found by this model.
Probab=22.21 E-value=2e+02 Score=23.70 Aligned_cols=42 Identities=19% Similarity=0.341 Sum_probs=30.4
Q ss_pred HHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+++.+.++ ++|.|+.+.+....+....+++.|++.| ++-.+
T Consensus 177 ~~~l~~~i~~~~id~ViIa~p~~~~~~~~~ll~~~~~~g-v~V~~ 220 (445)
T TIGR03025 177 LDDLVELVRAHRVDEVIIALPLSEEARILELLLQLRDLG-VDVRL 220 (445)
T ss_pred HHHHHHHHHhCCCCEEEEecCcccHHHHHHHHHHHHhcC-CEEEE
Confidence 455666664 7899988766554455678999999999 86543
No 475
>TIGR02801 tolR TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score.
Probab=22.18 E-value=2.4e+02 Score=18.58 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=21.0
Q ss_pred EEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 18 VVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 18 ~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
+++.+=.....+....++++|+++| ++++-
T Consensus 96 v~i~aD~~~~~~~vv~vmd~~~~~G-~~~v~ 125 (129)
T TIGR02801 96 VLIRADKTVPYGEVIKVMALLKQAG-IEKVG 125 (129)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHcC-CCeEE
Confidence 4444333344677788999999999 88864
No 476
>TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.
Probab=22.11 E-value=2e+02 Score=23.18 Aligned_cols=40 Identities=23% Similarity=0.172 Sum_probs=29.2
Q ss_pred HHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccE
Q 038413 6 HEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKR 46 (191)
Q Consensus 6 ~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr 46 (191)
++++.+.++ ++|++++..+...-..++--..||.++| +-.
T Consensus 112 ~~dv~~~lk~~~~dVlvnylPvGs~~A~~~YA~AAl~aG-~af 153 (351)
T TIGR03450 112 PVDVVQALKDAKVDVLVSYLPVGSEEADKFYAQCAIDAG-VAF 153 (351)
T ss_pred HHHHHHHHHhcCCCEEEECCccchHHHHHHHHHHHHHcC-Cce
Confidence 456778886 7999999887655556666677888888 543
No 477
>COG1869 RbsD ABC-type ribose transport system, auxiliary component [Carbohydrate transport and metabolism]
Probab=22.10 E-value=1.9e+02 Score=19.66 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 160 LELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 160 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
.++..+++ .+|.+++++.+|.|+|+...
T Consensus 82 ~~L~~~~~-~~~~~iei~~~sHE~fK~~t 109 (135)
T COG1869 82 EALLTLLT-QLGNQIEIQYVSHEEFKLLT 109 (135)
T ss_pred HHHHHHHH-hcCCCceEEecCHHHHHHhh
Confidence 34444444 44999999999999998543
No 478
>PRK11797 D-ribose pyranase; Provisional
Probab=21.79 E-value=2.4e+02 Score=19.33 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=37.6
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHh---CCceEEEEcCHHHHHHHhh
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT---GRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~---g~~~~~~~~~~~~~~~~~~ 189 (191)
+..|+.+++...+.-+... ---.+.+ ...-.+.++.+++.+.- +...++..++.++|.+..+
T Consensus 50 ~f~~vl~aIL~~~~Ve~~~-~~~e~~~-~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~r~~Fy~~a~ 114 (139)
T PRK11797 50 SFLDVLDVVLSEMQVEKAI-LAEEIKE-HNPELHEALLTQLEQLEQHQGNTIEIEYVSHEEFKQLTA 114 (139)
T ss_pred CHHHHHHHHHHhcCcchHH-Hhhhccc-cCHHHHHHHHHHHHHhhhccCCCcceeEECHHHHHHHHh
Confidence 4568888888877643211 0001211 12236677777776654 5546788899999988654
No 479
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=21.79 E-value=2.5e+02 Score=21.51 Aligned_cols=46 Identities=13% Similarity=0.056 Sum_probs=27.1
Q ss_pred hhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHH-HHHHHHHhCCceEEE
Q 038413 127 EEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLEL-ISLWEQKTGRSFKRV 177 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~-~~~~~~~~g~~~~~~ 177 (191)
.+++.+.+..++.+. ..+.++| +=--|..|+ .+.+++++|+++.+.
T Consensus 47 ~~~I~~~l~~a~~r~----D~vI~tG-GLGPT~DDiT~e~vAka~g~~lv~~ 93 (255)
T COG1058 47 PDRIVEALREASERA----DVVITTG-GLGPTHDDLTAEAVAKALGRPLVLD 93 (255)
T ss_pred HHHHHHHHHHHHhCC----CEEEECC-CcCCCccHhHHHHHHHHhCCCcccC
Confidence 566666666666662 3344443 444555555 456777788876653
No 480
>PRK05939 hypothetical protein; Provisional
Probab=21.79 E-value=3e+02 Score=22.45 Aligned_cols=45 Identities=9% Similarity=0.163 Sum_probs=29.0
Q ss_pred CCCCHHHHHHhhcc-CcEEEEccCCCC----cccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILKE-VDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~g-~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v 48 (191)
|..|.+++.+++.. ..+|+. ..+.+ +.....|.+.|++.| +.-++
T Consensus 117 ~~~d~e~l~~~l~~~tklV~v-esp~NptG~v~dl~~I~~la~~~g-i~liv 166 (397)
T PRK05939 117 DATDVQNVAAAIRPNTRMVFV-ETIANPGTQVADLAGIGALCRERG-LLYVV 166 (397)
T ss_pred CCCCHHHHHHhCCCCCeEEEE-ECCCCCCCCHHhHHHHHHHHHHcC-CEEEE
Confidence 45678889988864 444443 33333 233577889999998 75554
No 481
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=21.72 E-value=3.9e+02 Score=20.74 Aligned_cols=90 Identities=18% Similarity=0.117 Sum_probs=46.8
Q ss_pred CHHHHHHhhc-cCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHH
Q 038413 5 EHEKIVSILK-EVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAI 79 (191)
Q Consensus 5 d~~~l~~a~~-g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l 79 (191)
|.+.+.+|++ |++.|-.=....+ +..++.+.+.|++.| +. +-...|.-........-....+.+-.++.+..
T Consensus 86 ~~e~i~~Al~~G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~g-v~--veaE~ghlG~~d~~~~~~g~s~t~~eea~~f~ 162 (281)
T PRK06806 86 TFEKIKEALEIGFTSVMFDGSHLPLEENIQKTKEIVELAKQYG-AT--VEAEIGRVGGSEDGSEDIEMLLTSTTEAKRFA 162 (281)
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcC-Ce--EEEEeeeECCccCCcccccceeCCHHHHHHHH
Confidence 4455666664 5665543333222 455688888998888 64 22111110000000000001123345566667
Q ss_pred HhcCCCeEEEeccccccc
Q 038413 80 EAVEIPYTFVSANCYGAY 97 (191)
Q Consensus 80 ~~~~~~~tilrp~~~~~~ 97 (191)
++.|.+|.-+-.|..++.
T Consensus 163 ~~tg~DyLAvaiG~~hg~ 180 (281)
T PRK06806 163 EETDVDALAVAIGNAHGM 180 (281)
T ss_pred HhhCCCEEEEccCCCCCC
Confidence 678999999987777763
No 482
>PF12327 FtsZ_C: FtsZ family, C-terminal domain; InterPro: IPR024757 The FtsZ family of proteins are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin []. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea []. This entry represents a domain of FtsZ. In most FtsZ proteins is found in the C terminus, except in some alphaproteobacteria proteins where there is an extension C-terminal domain TIGR03483 from TIGRFAMs.; PDB: 2RHO_B 2RHJ_A 2VXY_A 2RHL_B 2RHH_A 2VAM_A 1W5F_B 2R75_1 2R6R_1 1RQ7_A ....
Probab=21.72 E-value=2.2e+02 Score=17.89 Aligned_cols=48 Identities=15% Similarity=0.102 Sum_probs=27.8
Q ss_pred hHHHHHHHHhcCc-------ccCCceeEeecCCCccCHHHHHHHHH---HHhCCceEEE
Q 038413 129 DIAKCTIKVINDP-------RTCNRIVIYRPQTNIISQLELISLWE---QKTGRSFKRV 177 (191)
Q Consensus 129 Dva~~~~~~l~~~-------~~~~~~~~i~~~~~~~t~~e~~~~~~---~~~g~~~~~~ 177 (191)
.+.+++-.++.+| .+.+-.+++.+ ++.+|+.|+-++.. +..+.+..+.
T Consensus 15 r~~~Av~~Al~spLl~~~i~~A~~vLvni~~-~~d~~l~ev~~~~~~i~~~~~~~a~ii 72 (95)
T PF12327_consen 15 RAEEAVEQALNSPLLDVDIKGAKGVLVNITG-GPDLSLSEVNEAMEIIREKADPDANII 72 (95)
T ss_dssp HHHHHHHHHHTSTTSTS-GGG-SEEEEEEEE--TTS-HHHHHHHHHHHHHHSSTTSEEE
T ss_pred HHHHHHHHHHhCccccCChHHhceEEEEEEc-CCCCCHHHHHHHHHHHHHHhhcCceEE
Confidence 3556677777765 13344567885 68899888766654 4455554443
No 483
>COG3933 Transcriptional antiterminator [Transcription]
Probab=21.60 E-value=4.9e+02 Score=21.90 Aligned_cols=61 Identities=10% Similarity=0.113 Sum_probs=44.5
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE-cCHHHHHHHh
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH-ISEEELVKLS 188 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~-~~~~~~~~~~ 188 (191)
++..|+.+.+..-+..-....+...+. +-=|...+...+.+.+|.+++.+. ++.....+..
T Consensus 146 vsp~~vle~l~e~~k~~~~~~GlllLV---DMGSL~~f~~~i~~~~~ipv~~i~nVST~~vLea~ 207 (470)
T COG3933 146 VSPSDVLEKLKEYLKERDYRSGLLLLV---DMGSLTSFGSIISEEFGIPVKVIPNVSTSMVLEAG 207 (470)
T ss_pred CCHHHHHHHHHHHHHhcCccCceEEEE---ecchHHHHHHHHHHHhCCceEEEecccHHHHHHHH
Confidence 689999999999888643333444442 455788899999999999988886 5666555443
No 484
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=21.57 E-value=2.1e+02 Score=20.93 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=26.7
Q ss_pred HHHHhh-ccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 8 KIVSIL-KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 8 ~l~~a~-~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.+.+++ +++|+|+...... .....+++.|+++| ++-+..
T Consensus 47 ~i~~~i~~~~d~Iiv~~~~~--~~~~~~l~~~~~~g-Ipvv~~ 86 (257)
T PF13407_consen 47 QIEQAISQGVDGIIVSPVDP--DSLAPFLEKAKAAG-IPVVTV 86 (257)
T ss_dssp HHHHHHHTTESEEEEESSST--TTTHHHHHHHHHTT-SEEEEE
T ss_pred HHHHHHHhcCCEEEecCCCH--HHHHHHHHHHhhcC-ceEEEE
Confidence 345555 4899988654432 44567899999999 876653
No 485
>PRK05968 hypothetical protein; Provisional
Probab=21.55 E-value=3e+02 Score=22.27 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=31.5
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEc
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|..|.+.+.+++.+...|+... +.+ ......|.+.|++.| +.-++.
T Consensus 134 d~~d~~~l~~~i~~tklV~ie~-pt~~~~~~~dl~~i~~la~~~g-i~vivD 183 (389)
T PRK05968 134 DGRDEEAVAKALPGAKLLYLES-PTSWVFELQDVAALAALAKRHG-VVTMID 183 (389)
T ss_pred CCCCHHHHHHhcccCCEEEEEC-CCCCCCcHHHHHHHHHHHHHcC-CEEEEE
Confidence 4567888888887667766543 333 244577899999999 765653
No 486
>cd08010 yceG_like proteins similar to Escherichia coli yceG. The gene product of Escherichia coli yceG has been erroneously annotated as an aminodeoxychorismate lyase. Its overexpression has been reported to cause abnormal biofilm architecture, and it has been reported to be part of a putative five-gene operon. It might function as a periplasmic solute-binding protein. The family also includes Streptomyces caeruleus NovB, an uncharacterized member of the novobiocin biosynthetic gene cluster.
Probab=21.46 E-value=3.1e+02 Score=20.77 Aligned_cols=18 Identities=6% Similarity=0.045 Sum_probs=14.7
Q ss_pred CCccCHHHHHHHHHHHhC
Q 038413 154 TNIISQLELISLWEQKTG 171 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~g 171 (191)
.+-.|..|+++.+++..+
T Consensus 34 ~eG~t~~~i~~~l~~~~~ 51 (245)
T cd08010 34 PEGYTLKQIAKALSKAGG 51 (245)
T ss_pred cCCccHHHHHHHHHhccC
Confidence 477899999999988765
No 487
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=21.42 E-value=1e+02 Score=22.06 Aligned_cols=36 Identities=6% Similarity=-0.073 Sum_probs=26.1
Q ss_pred HHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHc
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVA 41 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~ 41 (191)
...+.+++..+|+++.+.+..+ ....+|.+|.+-..
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s~pg~lKnaiD~l~~~ 96 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGSYPGALKNAIDWLSRE 96 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCCCCHHHHHHHHhCCHh
Confidence 3456677789999999877654 34568888887655
No 488
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated
Probab=21.38 E-value=4.4e+02 Score=21.19 Aligned_cols=17 Identities=6% Similarity=0.016 Sum_probs=9.9
Q ss_pred CCccCHHHHHHHHHHHh
Q 038413 154 TNIISQLELISLWEQKT 170 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~ 170 (191)
+..++..|+.+.+.+..
T Consensus 333 G~~~~~~~i~~~~~~~~ 349 (352)
T PRK07119 333 GMVPTPEEILEKIKEIL 349 (352)
T ss_pred CEeCCHHHHHHHHHHHh
Confidence 45566666666665554
No 489
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=21.28 E-value=1.8e+02 Score=22.90 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=23.7
Q ss_pred HHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcC
Q 038413 9 IVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAG 42 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g 42 (191)
+.++++|+|+|+.+++... ....+.+.+..++.+
T Consensus 61 ~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~ 107 (312)
T TIGR01772 61 LENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC 107 (312)
T ss_pred hHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC
Confidence 4578999999999998753 233455666666655
No 490
>PF12674 Zn_ribbon_2: Putative zinc ribbon domain
Probab=21.24 E-value=1.2e+02 Score=18.70 Aligned_cols=32 Identities=19% Similarity=0.070 Sum_probs=22.3
Q ss_pred ccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 156 IISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 156 ~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.+|+.|+++.+...+-..-. ++++++++.+..
T Consensus 41 ~~t~eemie~~~~~~~~~~~---~~~~~a~~~~~~ 72 (81)
T PF12674_consen 41 DITMEEMIEFCVPFMDEFNG---MTPEEARKMMPR 72 (81)
T ss_pred cCCHHHHHHHHHHHHHHhCC---CCHHHHHHHHHH
Confidence 67888888888877754433 677777766643
No 491
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=21.08 E-value=5e+02 Score=21.77 Aligned_cols=71 Identities=17% Similarity=0.280 Sum_probs=37.6
Q ss_pred hccCcEEEEcc-CCC-C--cccHHHHHHHHHHcCCccEEEc----CCcccCCCCCCCCCCchhhHHHHHHHHHHHHhcCC
Q 038413 13 LKEVDVVISTV-AYP-Q--FLDQLKIVHAIKVAGNIKRFLP----SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVEI 84 (191)
Q Consensus 13 ~~g~d~V~~~~-~~~-~--~~~~~~li~aa~~~g~vkr~v~----s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~~ 84 (191)
+.|.|+++... ..+ + +....-+++||+++| .+|+.. -.|....... .+..+ ..+ ..+-+.|...|.
T Consensus 164 VrG~dV~IVqS~~~pvNd~LmELLllidAlr~ag-AkrItlViPYl~YaRQDR~~---~~gep-Isa-k~vA~lL~~~G~ 237 (439)
T PTZ00145 164 IRGKDVYIIQPTCPPVNENLIELLLMISTCRRAS-AKKITAVIPYYGYARQDRKL---SSRVP-ISA-ADVARMIEAMGV 237 (439)
T ss_pred cCCCeEEEEecCCCCCcHHHHHHHHHHHHHHHhc-cCeEEEEeecccchheeccc---CCCCC-hhH-HHHHHHHHHcCC
Confidence 45677755432 222 2 344577899999999 998652 1233222111 11111 222 335566777788
Q ss_pred CeEEE
Q 038413 85 PYTFV 89 (191)
Q Consensus 85 ~~til 89 (191)
+.++.
T Consensus 238 d~Vit 242 (439)
T PTZ00145 238 DRVVA 242 (439)
T ss_pred CeEEE
Confidence 86553
No 492
>PRK07403 glyceraldehyde-3-phosphate dehydrogenase; Reviewed
Probab=21.04 E-value=1.1e+02 Score=24.43 Aligned_cols=44 Identities=14% Similarity=-0.005 Sum_probs=29.4
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEF 52 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~ 52 (191)
|++.+.-.-.|+|+||-++|.. ..+.......++| .++++.|+.
T Consensus 80 dp~~~~W~~~gvDiV~e~tG~f---~s~~~a~~hl~aG-ak~V~iSap 123 (337)
T PRK07403 80 NPLNLPWKEWGIDLIIESTGVF---VTKEGASKHIQAG-AKKVLITAP 123 (337)
T ss_pred CcccCChhhcCCCEEEeccchh---hhHHHHHHHhhCC-cEEEEeCCC
Confidence 4455443334999999998854 2344556666789 899887764
No 493
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.
Probab=21.02 E-value=2.1e+02 Score=23.61 Aligned_cols=16 Identities=13% Similarity=0.233 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhcCCC
Q 038413 70 EKKRIVRRAIEAVEIP 85 (191)
Q Consensus 70 ~~k~~~e~~l~~~~~~ 85 (191)
..|..+.+.+.+.|++
T Consensus 114 ~DK~~~r~~l~~~gip 129 (449)
T TIGR00514 114 GDKVSAIETMKKAGVP 129 (449)
T ss_pred CCHHHHHHHHHHCCCC
Confidence 3566666666666654
No 494
>TIGR03603 cyclo_dehy_ocin bacteriocin biosynthesis cyclodehydratase, SagC family. Members of this protein family include enzymes related to SagC, a cyclodehydratase involved in the biosynthesis of streptolysin S in Streptococcus pyogenes from the protoxin polypeptide (product of the sagA gene). This protein family serves as a marker for widely distributed prokaryotic systems for making a general class of heterocycle-containing bacteriocins. Note that this model does not find all possible examples of bacteriocin biosynthesis cyclodehydratases, an in particular misses the E. coli plasmid protein McbB of microcin B17 biosynthesis.
Probab=21.00 E-value=1.3e+02 Score=23.69 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=28.7
Q ss_pred HHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.++++|.|+.++..........+=++|.+.+ +..+.
T Consensus 144 ~~~~li~~~DlVid~tDn~~~r~L~~iN~ac~~~~-~PlV~ 183 (318)
T TIGR03603 144 ELKDLLKDYNYIIICTEHSNISLLRGLNKLSKETK-KPNTI 183 (318)
T ss_pred eHHHHhCCCCEEEECCCCccHhHHHHHHHHHHHHC-CCEEE
Confidence 45667899999999986554444445668999998 65554
No 495
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=20.86 E-value=3e+02 Score=20.87 Aligned_cols=61 Identities=18% Similarity=0.121 Sum_probs=38.5
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEeec-------------------------CCCccCHHHHHHHHHHHhCCceE
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRP-------------------------QTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~-------------------------~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
++++|..+=|+.+++.++++..+ |-.+.+.+ ....+|..+++++=...++.+
T Consensus 134 krP~intd~VCkffieA~e~GkY-gw~W~CPng~~~C~y~H~Lp~GyVLsrdk~Kd~tq~eislEefIE~eR~~L~~~-- 210 (299)
T COG5252 134 KRPWINTDRVCKFFIEAMESGKY-GWGWTCPNGNMRCSYIHKLPDGYVLSRDKIKDSTQVEISLEEFIELERQSLPEK-- 210 (299)
T ss_pred cCCCCChhHHHHHHHHHHhcCCc-cceeeCCCCCceeeeeeccCccceeccccccccccccccHHHHHHHHhccCCCc--
Confidence 46899999999999999997642 22122111 124577777777777777666
Q ss_pred EEEcCHHHH
Q 038413 176 RVHISEEEL 184 (191)
Q Consensus 176 ~~~~~~~~~ 184 (191)
...+..+.|
T Consensus 211 LTP~TeenF 219 (299)
T COG5252 211 LTPLTEENF 219 (299)
T ss_pred CCcccHHHH
Confidence 333444443
No 496
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=20.85 E-value=2.9e+02 Score=21.51 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=29.1
Q ss_pred HHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+++.+..+.+|+++.. |..+.-.+.+|.+.|++.+ .+-|.
T Consensus 200 Q~a~~~La~~vD~miVI-Gg~~SsNT~kL~eia~~~~-~~t~~ 240 (281)
T PF02401_consen 200 QEAARELAKEVDAMIVI-GGKNSSNTRKLAEIAKEHG-KPTYH 240 (281)
T ss_dssp HHHHHHHHCCSSEEEEE-S-TT-HHHHHHHHHHHHCT-TCEEE
T ss_pred HHHHHHHHhhCCEEEEe-cCCCCccHHHHHHHHHHhC-CCEEE
Confidence 34566666789988885 4455567799999999998 65554
No 497
>PF04468 PSP1: PSP1 C-terminal conserved region; InterPro: IPR007557 The yeast polymerase suppressor 1 (PSP1) protein partially suppresses mutations in DNA polymerases alpha and delta []. The C-terminal half of PSP1 contains a domain, which is also found in several hypothetical proteins from both eukaryotic and prokaryotic sources: Crithidia fasciculata RBP45 and RBP33, subunits of the cycling sequence binding protein (CSBP) II. RBP45 and RBP33 proteins bind specifically to the cycling sequences present in several mRNAs that accumulate periodically during the cell cycle. RBP45 and RBP33 are phosphoproteins, which are phosphorylated differentially during progression through the cell cycle. Hypothetical proteins with high sequence similarity have been identified in other kinetoplastid organisms []. Bacillus subtilis yaaT protein, which plays a significant role in phosphorelay during initiation of sporulation. It is possible that the yaaT protein is also related to DNA replication. The sequence of the yaaT protein is widely conserved in prokaryotes (bacteria and archaea), but the functions of the protein are unknown []. The actual biological significance of the PSP1 C-terminal domain has not yet been clearly established.
Probab=20.81 E-value=2.2e+02 Score=17.60 Aligned_cols=23 Identities=9% Similarity=0.039 Sum_probs=11.6
Q ss_pred CCccCHHHHHHHHHHHhCCceEE
Q 038413 154 TNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
...+.+.+|++-+.+.++..+..
T Consensus 63 ~~rvDFR~Lvr~L~~~f~~RIem 85 (88)
T PF04468_consen 63 ESRVDFRELVRDLAREFKTRIEM 85 (88)
T ss_pred CCcCcHHHHHHHHHHHhCceEEE
Confidence 34455555555555555544443
No 498
>PRK07729 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=20.64 E-value=1.8e+02 Score=23.36 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=29.9
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEF 52 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~ 52 (191)
|++.+.-.-.|+|+||-++|.. ..+..+....++| .++++.|..
T Consensus 79 dp~~~~W~~~gvDiVle~tG~f---~s~~~a~~hl~aG-ak~V~iSap 122 (343)
T PRK07729 79 DPKELPWTDLGIDIVIEATGKF---NSKEKAILHVEAG-AKKVILTAP 122 (343)
T ss_pred ChhhCcccccCCCEEEEccchh---hhHhHHHHHHHcC-CeEEEeCCC
Confidence 4555543335899999998864 2344566666789 899887754
No 499
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=20.63 E-value=2.2e+02 Score=23.15 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=7.9
Q ss_pred HHHHHHHHHHhcCCC
Q 038413 71 KKRIVRRAIEAVEIP 85 (191)
Q Consensus 71 ~k~~~e~~l~~~~~~ 85 (191)
.|..+.+.|.+.|++
T Consensus 104 dK~~~k~~l~~~gIp 118 (423)
T TIGR00877 104 SKAFAKDFMKRYGIP 118 (423)
T ss_pred CHHHHHHHHHHCCCC
Confidence 455555555555544
No 500
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=20.59 E-value=1.5e+02 Score=23.54 Aligned_cols=43 Identities=23% Similarity=0.092 Sum_probs=29.1
Q ss_pred CHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
|++.+.-.-.|+|+|+-++|... ....+..+.++| .++++.|.
T Consensus 79 ~p~~~~w~~~gvDiVie~tG~~~---s~e~a~~~l~aG-a~~V~~Sa 121 (325)
T TIGR01532 79 TPEALPWRALGVDLVLDCTGVYG---NREQGERHIRAG-AKRVLFSH 121 (325)
T ss_pred ChhhccccccCCCEEEEccchhc---cHHHHHHHHHcC-CeEEEecC
Confidence 44444433359999999988642 345666677789 88888664
Done!