BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038416
(387 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 274 bits (700), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 210/363 (57%), Gaps = 8/363 (2%)
Query: 22 SLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLN-RDLPYKLSPEDVYLTL 80
+L +D V + A+ DAL + YN Y+P++G S+R +A Y + + P L +DV LT
Sbjct: 46 NLPTDPEVTQ-AMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPEAP--LEAKDVILTS 102
Query: 81 GCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140
GCSQAIE+ L+VLA PG NILIPRPG+ LY A + +E + Y+LLPEK WE+DL
Sbjct: 103 GCSQAIELCLAVLANPGQNILIPRPGFSLYRTLA--ESMGIEVKLYNLLPEKSWEIDLKQ 160
Query: 141 VEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200
+E+L DE T +V+ NP NPCG+VFS +HLQKI A + ++ADE+Y + F Y
Sbjct: 161 LESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKY 220
Query: 201 VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHP 260
PM + VP+++ G ++ RW+VPGWRLGW++ D I N D + P
Sbjct: 221 EPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGP 279
Query: 261 VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320
T +Q A+ I+ T + F+ + LK AD+CY + IP + PV+P GAM++MV +
Sbjct: 280 CTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PVRPSGAMYLMVGI 338
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFC 380
+ + +D+EF +L E+SV LP N+ R+ + + RI+ FC
Sbjct: 339 EMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVMMLEACSRIQEFC 398
Query: 381 QRH 383
++H
Sbjct: 399 EQH 401
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 211/363 (58%), Gaps = 8/363 (2%)
Query: 22 SLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLN-RDLPYKLSPEDVYLTL 80
+L +D V + A+ DAL + YN Y+P++G S+R IA Y + + P L +DV LT
Sbjct: 69 NLPTDPEVTQ-AMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAP--LEAKDVILTS 125
Query: 81 GCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140
GCSQAI++ L+VLA PG NIL+PRPG+ LY+ A + +E + Y+LLPEK WE+DL
Sbjct: 126 GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLA--ESMGIEVKLYNLLPEKSWEIDLKQ 183
Query: 141 VEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200
+E L DE T +++ NP NPCG+VFS +HLQKI A + ++ADE+Y + F Y
Sbjct: 184 LEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY 243
Query: 201 VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHP 260
P+ + VP+++ G ++KRW+VPGWRLGW++ D I N D + P
Sbjct: 244 EPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGP 302
Query: 261 VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320
T +Q A+ I+ T F+ + LK AD+CY + IP + PV+P GAM++MV +
Sbjct: 303 CTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRPSGAMYLMVGI 361
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFC 380
+ + +D+EF +L E+SV LP N++R+ + + RI+ FC
Sbjct: 362 EMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFC 421
Query: 381 QRH 383
++H
Sbjct: 422 EQH 424
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 187/360 (51%), Gaps = 17/360 (4%)
Query: 36 DALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK------LSPEDVYLTLGCSQAIEIS 89
+A+ + N Y PT+G P AR +A + +K + ++V L G S I ++
Sbjct: 61 EAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMA 120
Query: 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT 149
++ + G L+P+PG+P YE + Y+ PE WE DLD + L D+ T
Sbjct: 121 ITAICDAGDYALVPQPGFPHYETVCKAYG--IGMHFYNCRPENDWEADLDEIRRLKDDKT 178
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF-GSTP---YVPMGV 205
+++ NP NPCG+ FS +H++ I R A L + + +DE+Y + F G P + +
Sbjct: 179 KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238
Query: 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQ 265
F + VP + LG + +VPGWRLGWL+ DP+G F++ +K P T +Q
Sbjct: 239 FETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG--NGPSFLEGLKRVGMLVCGPCTVVQ 296
Query: 266 AAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCI-TCPVKPQGAMFVMVKLNVSM 324
AA+ + T + +I+ ++E+A Y I E CI P P+GAM++M ++++
Sbjct: 297 AALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE--CIGLAPTMPRGAMYLMSRIDLEK 354
Query: 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384
DI D+EF KL +EE+V +LPG + R+ + +ERIKAFCQRHA
Sbjct: 355 YRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA 414
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 171/361 (47%), Gaps = 19/361 (5%)
Query: 31 EDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISL 90
++A A++ H N Y + G+P R+ I + R ++P+DV +T ++A+++
Sbjct: 60 KEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIF 118
Query: 91 SVLARPGANILIPRPGYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN 148
L PG IL+P P YP Y + G + Y + E+ W+ D+D + +
Sbjct: 119 GALLDPGDEILVPGPSYPPYTGLVKFYGG----KPVEYRTIEEEDWQPDIDDIRKKITDR 174
Query: 149 TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208
T AI +INP NP G ++ + L++I A I VI+DE+Y+ + + P G
Sbjct: 175 TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP-GSLTK 233
Query: 209 IVPVITLGSISKRWIVPGWRLGWLVTSDP-NGILQNSGFVDSIKGCLNAASHPVTFIQAA 267
VPVI + +SK + GWRLG++ DP N + + +D + + P F AA
Sbjct: 234 DVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQF--AA 291
Query: 268 VPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327
+ + + + + + LKE D Y+R+ EIP I+ KPQGA ++ K+ V +
Sbjct: 292 IAGLTGPMD--YLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIFPKIEVGPWK- 347
Query: 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385
+D EF L + V+ + G G R F LE+ ++R + F + K
Sbjct: 348 --NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERLK 405
Query: 386 K 386
+
Sbjct: 406 E 406
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 26/337 (7%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+ G+ R GIA + +SP+ V +T G QA+ + L PG +++ P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 106 GYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163
+ Y +I AG N+ + K ++ L+ VE L T A++I +P NP G
Sbjct: 134 VWVSYIPQIILAGGTVNV----VETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGV 189
Query: 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223
V+ + L+ + R A+ +I+DEVY+ L + + V ++ + SK
Sbjct: 190 VYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS 249
Query: 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKI 283
+ GWR+G+L++S+ S C+N T Q A + ++ N + +
Sbjct: 250 MTGWRVGYLISSEKVAT-AVSKIQSHTTSCIN------TVAQYAALKALEVDN----SYM 298
Query: 284 IGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEES 343
+ KE + ER+K++ V+P+GA ++ K+ GDD++FC +L +E+
Sbjct: 299 VQTFKERKNFVVERLKKMGV--KFVEPEGAFYLFFKVR-------GDDVKFCERLLEEKK 349
Query: 344 VIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFC 380
V ++PG ++R++FA L + L+RI+ F
Sbjct: 350 VALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFL 386
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 167/340 (49%), Gaps = 26/340 (7%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPR 104
Y P +G+ R IA+ L + + P+ ++ + LG +QA + LS + G +LIP
Sbjct: 58 YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPT 117
Query: 105 PGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161
P + Y I A G +E Y+ E + +++D ++ + T A++I +P NP
Sbjct: 118 PAFVSYAPAVILAGG--KPVEVPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPT 172
Query: 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISK 220
G V + + L++IA +IVI+DEVY H + + + G IT+ SK
Sbjct: 173 GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK 232
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQ-AAVPRIVDETNEAF 279
+ + GWRLG++ P+ I++ +K + A+ PVTFIQ AA + DE +
Sbjct: 233 TFAMTGWRLGFVAA--PSWIIER-----MVKFQMYNATCPVTFIQYAAAKALKDERSWKA 285
Query: 280 FAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLA 339
++ + ++R+ E+ T VKP+GA ++ ++ + L +F +
Sbjct: 286 VEEMRKEYDRRRKLVWKRLNEMGLPT--VKPKGAFYIFPRIRDTGL----TSKKFSELML 339
Query: 340 KEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIK 377
KE V ++PG G + ++RI++A LE+ +ER++
Sbjct: 340 KEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMERME 379
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 167/340 (49%), Gaps = 26/340 (7%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPR 104
Y P +G+ R IA+ L + + P+ ++ + LG +QA + LS + G +LIP
Sbjct: 59 YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPT 118
Query: 105 PGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161
P + Y I A G +E Y+ E + +++D ++ + T A++I +P NP
Sbjct: 119 PAFVSYAPAVILAGG--KPVEVPTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPT 173
Query: 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISK 220
G V + + L++IA +IVI+DEVY H + + + G IT+ SK
Sbjct: 174 GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK 233
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQ-AAVPRIVDETNEAF 279
+ + GWRLG++ P+ I++ +K + A+ PVTFIQ AA + DE +
Sbjct: 234 TFAMTGWRLGFVAA--PSWIIER-----MVKFQMYNATCPVTFIQYAAAKALKDERSWKA 286
Query: 280 FAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLA 339
++ + ++R+ E+ T VKP+GA ++ ++ + L +F +
Sbjct: 287 VEEMRKEYDRRRKLVWKRLNEMGLPT--VKPKGAFYIFPRIRDTGL----TSKKFSELML 340
Query: 340 KEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIK 377
KE V ++PG G + ++RI++A LE+ ++R++
Sbjct: 341 KEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRME 380
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 154/356 (43%), Gaps = 47/356 (13%)
Query: 34 VVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLS 91
+++A+R A + Y+P G+P+ R +A+ + + PE V +T G ++A+ + L
Sbjct: 43 LLEAVRRALGRQDQYAPPAGLPALREALAE------EFAVEPESVVVTSGATEALYVLLQ 96
Query: 92 VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA 151
L PG +++ P + +Y A + DL PE + +DL +E T A
Sbjct: 97 SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEG-FRLDLSALEKALTPRTRA 155
Query: 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP-----YVPMGVF 206
+++ P NP G VF + L+ IAR AR + +I+DEVY+ L +G P + P F
Sbjct: 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF 215
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV-TFIQ 265
T+GS KR G+R+GW+V F+ + G S T +Q
Sbjct: 216 -------TVGSAGKRLEATGYRVGWIVGPKE--------FMPRLAGMRQWTSFSAPTPLQ 260
Query: 266 AAVPRIVD-ETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324
A V + E F+ + + D+ ++ + P+G F+M +L
Sbjct: 261 AGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVY--VPEGTYFLMAELP--- 315
Query: 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERI 376
G D +L +E V ++P + K+ R AF L LER+
Sbjct: 316 ----GWD---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 156/342 (45%), Gaps = 29/342 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y P G P R IA L RD +++ +T G Q+I + + PG ++IP P
Sbjct: 63 YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLP---EKRWEVDLDGVEALADENTVAIVIINPGN 159
YP A G+ +LP E +++V + + T +V P N
Sbjct: 123 FWVSYPEMVKLAEGTPV--------ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSN 174
Query: 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG--SIVPVITLGS 217
P G V++ ++ IA+ A G+ V++DE+Y + + ++ +G + +
Sbjct: 175 PTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSG 234
Query: 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNE 277
+K + + GWR+G+L + P +++ + I+G ++ S+ TF Q + + +
Sbjct: 235 FAKTYAMTGWRVGFL--AGPVPLVKAA---TKIQG--HSTSNVCTFAQYGAIAAYENSQD 287
Query: 278 AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLK 337
+++ E + + +P + CP KP GA ++ S+ + L+FC +
Sbjct: 288 C-VQEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFYMF----PSIAKTGRSSLDFCSE 341
Query: 338 LAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAF 379
L + V +PG G + +R+++A + T++ G+ER++ F
Sbjct: 342 LLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 146/344 (42%), Gaps = 30/344 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G SQA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +K
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAK 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V S + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382
E V ++PG +R+++A L LER R
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 39/343 (11%)
Query: 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP-L 109
G P+ ++ ++ L + PE + T G + A + L L PG +++ P Y L
Sbjct: 64 GSPAFKKSVSQ-----LYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQL 118
Query: 110 YEI-HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168
Y+I + G+ +L + + E W DL+ + L T I I N NP G V
Sbjct: 119 YDIPKSLGAEVDL----WQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRT 174
Query: 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV----ITLGSISKRWIV 224
+L+++ A +G +++DEVY + P SI+ V I + S+S + +
Sbjct: 175 YLEELVEIASEVGAYILSDEVYRSFSELDVP--------SIIEVYDKGIAVNSLSXTYSL 226
Query: 225 PGWRLGWLVTSDP-NGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKI 283
PG R+GW+ + IL++ + D C V + A + + E N
Sbjct: 227 PGIRIGWVAANHQVTDILRD--YRDYTXICAGVFDDLVAQLALAHYQEILERNRH----- 279
Query: 284 IGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEES 343
+L+E I + I+E P ++ ++P VK+ V + +FCL+L +E
Sbjct: 280 --ILEENLAILDQWIEEEPLVSY-IRPAVVSTSFVKIAVDXPXE-----DFCLQLLQEHG 331
Query: 344 VIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386
V+++PG ++R+ FA E TL GLE++ F +R K+
Sbjct: 332 VLLVPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDKE 374
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 145/344 (42%), Gaps = 30/344 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +K
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAK 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V S + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382
E V ++PG +R+++A L LER R
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 145/344 (42%), Gaps = 30/344 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G SQA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +K
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAK 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382
E V ++PG +R+++A L LER R
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 145/344 (42%), Gaps = 30/344 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G SQA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +K
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAK 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382
E V ++PG +R+++A L LER R
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 145/344 (42%), Gaps = 30/344 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G SQA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +K
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAK 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382
E V ++PG +R+++A L LER R
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 155/351 (44%), Gaps = 35/351 (9%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP-R 104
Y+ G R IA++LN + +++Y T G + ++ I L + I
Sbjct: 72 YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNV 164
P +P Y++ + L D + +++D D +E + +T ++I +P NP G V
Sbjct: 132 PYFPEYKVFVNAAGARLVEVPADT---EHFQIDFDALEERINAHTRGVIINSPNNPSGTV 188
Query: 165 FSYQHLQKIA----RTARNLG--IIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLG 216
+S + ++K++ + ++ +G I +IADE Y + + P+V ++V
Sbjct: 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCY---- 244
Query: 217 SISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV--TFIQAAVPRIVDE 274
S SK +PG R+G+++ P+ + + ++ G A + + Q + +
Sbjct: 245 SYSKSLSLPGERIGYVLV--PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGA 302
Query: 275 TNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEF 334
T + I KE D+ YE + I C KP GA + VK LED D F
Sbjct: 303 TGD------INAYKENRDLLYEGLTRIG-YHC-FKPDGAFYXFVK----ALED--DSNAF 348
Query: 335 CLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385
C K AKEE V+I+ G W+RI++ + ++ + +++ K
Sbjct: 349 CEK-AKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKYNK 398
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 30/338 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+P G+P R +A+ R+ ++PE+ +T+G QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 106 ---GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162
YP A G +E LPE+ + D + V T A+V+ +P NP G
Sbjct: 124 YWVSYPEMVRFAGGVVVEVET-----LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISK 220
V+ + L+ +AR A +++DE+Y HL + + P G + P +T+ +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAX 234
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--DETNEA 278
+ + GWR+G+ P +++ V S + + P T Q A + E + A
Sbjct: 235 AFAMTGWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRA 287
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
F + D+ E + + V+P GA +V++ + I D +
Sbjct: 288 FVEMAREAYRRRRDLLLEGLTALGLKA--VRPSGAFYVLMDTS-----PIAPDEVRAAER 340
Query: 339 AKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERI 376
E V ++PG +R+++A L LER
Sbjct: 341 LLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 45/399 (11%)
Query: 22 SLLSDSTVAEDA------VVDALRTAHYNCYSPTLGVPSARRGIADYLNR-DLPYKLSPE 74
+LL + EDA ++ A YS + GV R +A Y+ R D P+
Sbjct: 95 NLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPD 154
Query: 75 DVYLTLGCSQAIEISLSVLARPGAN----ILIPRPGYPLYEIHAAGSNNNLEARHYDLLP 130
++YLT G S I L +L G ++IP P YPLY A S + +Y L
Sbjct: 155 NIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS--AVISELDAIQVNYYLDE 212
Query: 131 EKRWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185
E W ++++ + E + + IINPGNP G V S + ++ + A + ++
Sbjct: 213 ENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLL 272
Query: 186 ADEVYN---------HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVP-GWRLGWLVTS 235
ADEVY +F Y + S V + + S SK ++ G+R G++
Sbjct: 273 ADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVI 332
Query: 236 DPNGILQNSGF-VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAK---IIGLLKETA 291
+ + ++ + S++ C + I P +E+ E F + ++G L + A
Sbjct: 333 NLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKA 392
Query: 292 DICYERIKEIPCITC-PVKPQGAMFVMVKLNV-------SMLEDIGDDLEFCLKLAKEES 343
+ + ++P I C P+ QGAM+ ++ + + + D+ +C+KL +E
Sbjct: 393 KLTEDLFNQVPGIHCNPL--QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETG 450
Query: 344 VIILPGRTVGMKN---WLRIAFAAEPATLEDGLERIKAF 379
+ ++PG G + R+ L+ L+++K F
Sbjct: 451 ICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDF 489
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 46/346 (13%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+ + G+ R I++ + P+++ +T G S + +LS + G +LI P
Sbjct: 62 YTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNP 121
Query: 106 GYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163
YP Y+ I G+ + ++ +E + T AI+I +P NP G
Sbjct: 122 CYPCYKNFIRFLGAKPVF------------CDFTVESLEEALSDKTKAIIINSPSNPLGE 169
Query: 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223
V ++I A +I+DE+YN L + Y + ++ I + S +
Sbjct: 170 VID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYA 225
Query: 224 VPGWRLGWLVTSDP--NGIL--QNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAF 279
+ GWR+G+++++D IL Q + F+ + AA + + R ++ + F
Sbjct: 226 MTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAA---LKAFEKETEREINSMIKEF 282
Query: 280 FAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDD-LEFCLKL 338
+ +LK D +E + P+ GA +V +IG+D EF KL
Sbjct: 283 DRRRRLVLKYVKDFGWE-------VNNPI---GAYYV--------FPNIGEDGREFAYKL 324
Query: 339 AKEESVIILPGRTVGMK--NWLRIAFAAEPATLEDGLERIKAFCQR 382
KE+ V + PG G K N++RI++A +++GLERIK F +
Sbjct: 325 LKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLNK 370
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 149/347 (42%), Gaps = 46/347 (13%)
Query: 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVLARPGANILI 102
N Y+ G P + ++ ++ + ++P +V +T+G +A+ ++ G ++I
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 103 PRPGYPLYE--IHAAGSNNNLEARHYDLLPEKR--------WEVDLDGVEALADENTVAI 152
P + YE + AAG R L P K W +D + +EAL +E T I
Sbjct: 131 IEPFFDCYEPMVKAAGGI----PRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMI 186
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVP 211
+I P NP G V L+ +A + ++ ++DEVY H+ F ++ + G
Sbjct: 187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246
Query: 212 VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV-----TFIQA 266
IT+GS K + + GW++GW P +L+N V + C+ + P+ +
Sbjct: 247 TITIGSAGKTFSLTGWKIGW--AYGPEALLKNLQMVH--QNCVYTCATPIQEAIAVGFET 302
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV-------K 319
+ R+ ++ E +F I G L D + E+ P PQG F++ K
Sbjct: 303 ELKRL--KSPECYFNSISGELMAKRDYMASFLAEVG--MNPTVPQGGYFMVADWSSLDSK 358
Query: 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEP 366
++++ D D F + K +VG++ AF +EP
Sbjct: 359 VDLTQETDARKDYRFTKWMTK----------SVGLQGIPPSAFYSEP 395
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 144/371 (38%), Gaps = 41/371 (11%)
Query: 37 ALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96
AL N YSPT G PS + + +L E+V +T G ++ I L L
Sbjct: 82 ALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNA 141
Query: 97 GANILIPRPGYPLY--EIHAAGSN---------NNLEARHYDLLPEKRWEVDLDGVEALA 145
G +++ P + Y I G L+ R+ + W +D + E
Sbjct: 142 GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRN---TRGEEWTIDFEQFEKAI 198
Query: 146 DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205
T A++I P NP G VF+ + L + +++I+DEVY HL F + + +
Sbjct: 199 TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIAT 257
Query: 206 FGSIVPVITL--GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTF 263
+ +TL GS + GWR+GW+++ N L + + C + P
Sbjct: 258 LSPEIGQLTLTVGSAGXSFAATGWRIGWVLSL--NAELLSYAAKAHTRICF---ASPSPL 312
Query: 264 IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN-V 322
+A I D +F K+ I E+ P+G FV+V + V
Sbjct: 313 QEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPY--TAPEGTYFVLVDFSKV 370
Query: 323 SMLEDI---------GDDLEFCLKLAKEESVIILPGRTVGMK-------NWLRIAFAAEP 366
+ ED G D L E V+ +P +K N LR A +
Sbjct: 371 KIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDD 430
Query: 367 ATLEDGLERIK 377
A LE+ +ER+K
Sbjct: 431 AYLENAVERLK 441
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 30/335 (8%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN-ILIPR 104
YS + G+ R IA + + + +D++LT G S + + + +L R + IL+P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPG 158
P YPLY A L Y L W ++ V+ ++ N A+V+INPG
Sbjct: 190 PQYPLYSASIALHGGALVP--YYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247
Query: 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVY------NHLAFGSTPYV--PMGVFGSIV 210
NP G V + ++ I + +N G++++ADEVY ++ F S + +G +
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDL 307
Query: 211 PVITLGSISKRWIVP-GWRLGWL-VTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAV 268
P+++ S+SK + G R G+ +T + + + S+ C N + +
Sbjct: 308 PLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP 367
Query: 269 PRIVDETNEAFFAK---IIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVK------ 319
P+ DE+ ++ A+ I+ L A ++ ITC + +GAM+V +
Sbjct: 368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN-EAEGAMYVFPQICLPQK 426
Query: 320 -LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG 353
+ + + D + L+L + ++++PG G
Sbjct: 427 AIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 148/347 (42%), Gaps = 46/347 (13%)
Query: 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVLARPGANILI 102
N Y+ G P + ++ ++ + ++P +V +T+G +A+ ++ G ++I
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 103 PRPGYPLYE--IHAAGSNNNLEARHYDLLPEKR--------WEVDLDGVEALADENTVAI 152
P + YE + AAG R L P K W +D + +EAL +E T I
Sbjct: 131 IEPFFDCYEPMVKAAGGI----PRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMI 186
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVP 211
+I P NP G V L+ +A + ++ ++DEVY H+ F ++ + G
Sbjct: 187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246
Query: 212 VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV-----TFIQA 266
IT+GS + + GW++GW P +L+N V + C+ + P+ +
Sbjct: 247 TITIGSAGXTFSLTGWKIGW--AYGPEALLKNLQMVH--QNCVYTCATPIQEAIAVGFET 302
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV-------K 319
+ R+ ++ E +F I G L D + E+ P PQG F++ K
Sbjct: 303 ELKRL--KSPECYFNSISGELMAKRDYMASFLAEVG--MNPTVPQGGYFMVADWSSLDSK 358
Query: 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEP 366
++++ D D F + K +VG++ AF +EP
Sbjct: 359 VDLTQETDARKDYRFTKWMTK----------SVGLQGIPPSAFYSEP 395
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
YS + G+ R A Y R + PE+V +T G S+AI S +V+A PG IL+ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 106 GYPLYEIHAAGSNNNLEARHYDLLP-EKRWEVDL---DGVEALADENTVAIVIINPGNPC 161
Y Y A + L+P +R E +E+ +E T IV+ NP NP
Sbjct: 135 FYANYNAFAKIAG-------VKLIPVTRRXEEGFAIPQNLESFINERTKGIVLSNPCNPT 187
Query: 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV-----PVITLG 216
G V+ + + A G+ +I DEVY+ + F G F S + V+ +
Sbjct: 188 GVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVID 240
Query: 217 SISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN 276
S+S ++ G R+G L+T +N + P Q +++ +
Sbjct: 241 SVSXKFSACGARVGCLIT-------RNEELISHAXKLAQGRLAPPLLEQIGSVGLLN-LD 292
Query: 277 EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329
++FF + +E + ++++E + KP GA ++ +L V E+
Sbjct: 293 DSFFDFVRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAELPVEDAEEFA 344
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 147/361 (40%), Gaps = 49/361 (13%)
Query: 39 RTAHY-----NCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSV 92
R AH+ N Y+P GV + R IA R Y+ + D+ +T G ++A+ +++
Sbjct: 51 RLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITA 110
Query: 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152
L R G ++ P Y Y A S ++ L + VD AL E T +
Sbjct: 111 LVRNGDEVICFDPSYDSYAPAIALSGGIVKRM---ALQPPHFRVDWQEFAALLSERTRLV 167
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP- 211
++ P NP V+ + + I VI+DEVY H+ F + + +
Sbjct: 168 ILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRER 227
Query: 212 VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTF-----IQA 266
+ + S K + + GW++G+ V P I + +TF Q
Sbjct: 228 AVAVSSFGKTYHMTGWKVGYCVAPAP------------ISAEIRKVHQYLTFSVNTPAQL 275
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADICYERIKE-----IPCITCPVKPQGAMFVMVKLN 321
A+ ++ E + A + ++ DI + E +PC +G F++V +
Sbjct: 276 ALADMLRAEPEHYLA-LPDFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYS 327
Query: 322 -VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNW----LRIAFAAEPATLEDGLERI 376
VS L DD+EFC L +E V +P + +R+ FA + +TL ER+
Sbjct: 328 AVSTL----DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERL 383
Query: 377 K 377
+
Sbjct: 384 R 384
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 45/339 (13%)
Query: 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104
Y+P G+P R +A +L + ++SPE++ +T+G + A+++ VL PG ++
Sbjct: 70 MYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 105 PGY--PLYEIHAAGSN------NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIIN 156
P Y L G+ +N + DLL EK E+ G + I I
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDN-DGMRVDLLEEKIKELKAKG------QKVKLIYTIP 182
Query: 157 PG-NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITL 215
G NP G S + + + A +++I D YN + + VP+ + VI
Sbjct: 183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA 242
Query: 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIV--D 273
G++SK + G+R+GW++ + +K L P+ F A+ + + +
Sbjct: 243 GTLSK-VLGTGFRIGWIIAEG-----------EILKKVL-MQKQPIDFCAPAISQYIALE 289
Query: 274 ETNEAFFAK--IIGLL---KETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328
+F K + G L KE DI + ++ KP MFVM L +
Sbjct: 290 YLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMF-----FLPEG 344
Query: 329 GDDLEFCLKLAKEESVIILPGRTV----GMKNWLRIAFA 363
D + F +L + E V+++PG+ KN +R+ F+
Sbjct: 345 ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS 383
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 45/384 (11%)
Query: 32 DAVVDALRTA-----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQA 85
D V+A + A N Y+ T G P + +A + L ++ P +V +T+G A
Sbjct: 44 DFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA 103
Query: 86 IEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEAR-----HYDLLPEKRWEVD 137
+ + L G ++I P + YE + A G + + + +L W++D
Sbjct: 104 LFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 163
Query: 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197
+ T A+V+ P NP G VFS + L+ +A + ++ I DEVY + +
Sbjct: 164 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223
Query: 198 TPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA 256
++ + G +T+GS K + GW++GW++ P+ I+++ V N+
Sbjct: 224 HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL--GPDHIMKHLRTVHQ-----NS 276
Query: 257 ASHPVTFIQAAVPRIVDETN------EAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310
H T QAAV + ++F + ++ D ++ + P+ P
Sbjct: 277 VFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGL--KPLIP 334
Query: 311 QGAMFVMVKL--------NVSMLEDIGDDLEFCLKLAKEESVIILP-------GRTVGMK 355
QG+ F++ + ++ D D F + K + ++ +P
Sbjct: 335 QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFD 394
Query: 356 NWLRIAFAAEPATLEDGLERIKAF 379
+++R F + ATL+ E+++ +
Sbjct: 395 HYIRFCFVKDEATLQAMDEKLRKW 418
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 159/384 (41%), Gaps = 45/384 (11%)
Query: 32 DAVVDALRTA-----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQA 85
D V+A + A N Y+ T G P + +A + L ++ P +V +T+G A
Sbjct: 44 DFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA 103
Query: 86 IEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEAR-----HYDLLPEKRWEVD 137
+ + L G ++I P + YE + A G + + + +L W++D
Sbjct: 104 LFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 163
Query: 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197
+ T A+V+ P NP G VFS + L+ +A + ++ I DEVY + +
Sbjct: 164 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223
Query: 198 TPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA 256
++ + G +T+GS + GW++GW++ P+ I+++ V N+
Sbjct: 224 HQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GPDHIMKHLRTVHQ-----NS 276
Query: 257 ASHPVTFIQAAVPRIVDETN------EAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310
H T QAAV + ++F + ++ D ++ + P+ P
Sbjct: 277 VFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGL--KPIIP 334
Query: 311 QGAMFVMVKL--------NVSMLEDIGDDLEFCLKLAKEESVIILP-------GRTVGMK 355
QG+ F++ + ++ D D F + K + ++ +P
Sbjct: 335 QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFD 394
Query: 356 NWLRIAFAAEPATLEDGLERIKAF 379
+++R F + ATL+ E+++ +
Sbjct: 395 HYIRFCFVKDEATLQAMDEKLRKW 418
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 159/384 (41%), Gaps = 45/384 (11%)
Query: 32 DAVVDALRTA-----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQA 85
D V+A + A N Y+ T G P + +A + L ++ P +V +T+G A
Sbjct: 44 DFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA 103
Query: 86 IEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEAR-----HYDLLPEKRWEVD 137
+ + L G ++I P + YE + A G + + + +L W++D
Sbjct: 104 LFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 163
Query: 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197
+ T A+V+ P NP G VFS + L+ +A + ++ I DEVY + +
Sbjct: 164 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223
Query: 198 TPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA 256
++ + G +T+GS + GW++GW++ P+ I+++ V N+
Sbjct: 224 HQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GPDHIMKHLRTVHQ-----NS 276
Query: 257 ASHPVTFIQAAVPRIVDETN------EAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310
H T QAAV + ++F + ++ D ++ + P+ P
Sbjct: 277 VFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGL--KPLIP 334
Query: 311 QGAMFVMVKL--------NVSMLEDIGDDLEFCLKLAKEESVIILP-------GRTVGMK 355
QG+ F++ + ++ D D F + K + ++ +P
Sbjct: 335 QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFD 394
Query: 356 NWLRIAFAAEPATLEDGLERIKAF 379
+++R F + ATL+ E+++ +
Sbjct: 395 HYIRFCFVKDEATLQAMDEKLRKW 418
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 145/359 (40%), Gaps = 41/359 (11%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y T G R +A ++ + +S ++ G QA+++ V PG I++ P
Sbjct: 79 YGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAP 138
Query: 106 GYPLYEIHAAGSNNNLEARHYD------LLPEKRWEVDLDGVEALADEN-----TVAIVI 154
Y L I A ++YD L +K VDL + + +
Sbjct: 139 TY-LAAIQA--------FKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTV 189
Query: 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVIT 214
NP G S +K+ A +++ D Y+ L + P P+ F VI
Sbjct: 190 STFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIY 249
Query: 215 LGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDE 274
LG+ SK + PG+R+GW V + P+ I + SI C N TF QA + V+
Sbjct: 250 LGTFSK-ILAPGFRIGW-VAAHPHLIRKMEIAKQSIDLCTN------TFGQAIAWKYVEN 301
Query: 275 TN-EAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDL 332
+ KII K D E ++E +P KP+G MFV V L G D
Sbjct: 302 GYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPE------GIDT 355
Query: 333 EFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEP-ATLEDGLERIKAFCQRHAKK 386
+ ++ A + V +PG + KN +R+ F P T+ +G+ R+ + K+
Sbjct: 356 KLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 414
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 44/332 (13%)
Query: 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE--IHAAGSNNNLEARHYDLLPEK 132
+V +T+G ++AI ++ L PG+ +L+ P Y Y + AG++ L+P+
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVT----VPLVPDG 143
Query: 133 R-WEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191
R + +D D + T A++I +P NP G V S L IA A ++VI DEVY
Sbjct: 144 RGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE 203
Query: 192 HLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250
HL F ++P+ F + IT+ S + + GW++GW G + I
Sbjct: 204 HLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW-----------ACGPAELI 252
Query: 251 KGCLNAASHPVTFI-----QAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305
G + AA ++++ Q AV +D T +A+ A + L+ D + E I
Sbjct: 253 AG-VRAAKQYLSYVGGAPFQPAVALALD-TEDAWVAALRNSLRARRDRLAAGLTE---IG 307
Query: 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP---------GRTVGMKN 356
V + + + D D EFC L ++ V +P G+ +
Sbjct: 308 FAVHDSYGTYFLCADPRPLGYD--DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQAD 365
Query: 357 -W---LRIAFAAEPATLEDGLERIKAFCQRHA 384
W +R F TL++ + R+ +R A
Sbjct: 366 VWNHLVRFTFCKRDDTLDEAIRRLSVLAERPA 397
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 164/388 (42%), Gaps = 37/388 (9%)
Query: 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYL 78
G +S + ++ + A + N Y+ G P+ + ++ + ++ P E++ +
Sbjct: 31 GFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILV 90
Query: 79 TLGCSQAIEISLSVLARPGANILIPRPGYPLYE--IHAAGSNN---NLEARHYDLLP--E 131
+G ++ S+ L PG ++I P Y YE + AG+ L ++ D +
Sbjct: 91 AVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTS 150
Query: 132 KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191
W D +E+ T AI++ P NP G V++ Q LQ IA + I+DEVY
Sbjct: 151 SDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE 210
Query: 192 HLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV--D 248
L + +V + G IT+GS K + V GW+LGW + P ++++ V +
Sbjct: 211 WLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI--GPAHLIKHLQTVQQN 268
Query: 249 SIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305
S C L AA +I + R+ D E +F + L+ D + +
Sbjct: 269 SFYTCATPLQAALAEAFWID--IKRMDDP--ECYFNSLPKELEVKRDRMVRLLNSVGLK- 323
Query: 306 CPVKPQGAMFVMVKLNVSMLEDIGD-------DLEFCLKLAKEESVIILPGRTV------ 352
P+ P G F++ ++ S+ D+ D D +F + K + + +P
Sbjct: 324 -PIVPDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK 381
Query: 353 -GMKNWLRIAFAAEPATLEDGLERIKAF 379
+ +R F + +TL+ E +A+
Sbjct: 382 PHFEKLVRFCFIKKDSTLDAAEEIFRAW 409
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 163/388 (42%), Gaps = 37/388 (9%)
Query: 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYL 78
G +S + ++ + A + N Y+ G P+ + ++ + ++ P E++ +
Sbjct: 31 GFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILV 90
Query: 79 TLGCSQAIEISLSVLARPGANILIPRPGYPLYE--IHAAGSNN---NLEARHYDLLP--E 131
+G ++ S+ L PG ++I P Y YE + AG+ L ++ D +
Sbjct: 91 AVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTS 150
Query: 132 KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191
W D +E+ T AI++ P NP G V++ Q LQ IA + I+DEVY
Sbjct: 151 SDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE 210
Query: 192 HLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV--D 248
L + +V + G IT+GS + V GW+LGW + P ++++ V +
Sbjct: 211 WLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSI--GPAHLIKHLQTVQQN 268
Query: 249 SIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305
S C L AA +I + R+ D E +F + L+ D + +
Sbjct: 269 SFYTCATPLQAALAEAFWID--IKRMDDP--ECYFNSLPKELEVKRDRMVRLLNSVGLK- 323
Query: 306 CPVKPQGAMFVMVKLNVSMLEDIGD-------DLEFCLKLAKEESVIILPGRTV------ 352
P+ P G F++ ++ S+ D+ D D +F + K + + +P
Sbjct: 324 -PIVPDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK 381
Query: 353 -GMKNWLRIAFAAEPATLEDGLERIKAF 379
+ +R F + +TL+ E +A+
Sbjct: 382 PHFEKLVRFCFIKKDSTLDAAEEIFRAW 409
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 137/328 (41%), Gaps = 35/328 (10%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
YSPT G R +A+++ + PE+V +T G QA+++ V G+ +L+ P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 106 GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPG--NPCGN 163
Y A L+ + +P DLD +E + + + P NP G
Sbjct: 124 SY-----MGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGG 178
Query: 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST---PYVPMGVFGSIVPVITLGSISK 220
+ +++ + G++V+ D+ Y L FG + VI LGS SK
Sbjct: 179 LTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK 238
Query: 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFF 280
+ PG R+ + V + P + + V + +G A H Q V ++ E
Sbjct: 239 -VLSPGLRVAFAV-AHPEALQK---LVQAKQG---ADLHTPMLNQMLVHELLKEGFSERL 290
Query: 281 AKIIGLLKETADICYERI-KEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLA 339
++ + +E A + +E+P +P+G MFV ++L G E + A
Sbjct: 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMEL------PKGLSAEGLFRRA 344
Query: 340 KEESVIILPGRTV----GMKNWLRIAFA 363
EE+V +PG G +N LR+++A
Sbjct: 345 LEENVAFVPGGPFFANGGGENTLRLSYA 372
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 141/356 (39%), Gaps = 51/356 (14%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y+ LG+P+ R+ IA L P V +T G S ++ + L G + I P
Sbjct: 64 YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123
Query: 106 GYPLYE--IHAAGSNNNLEARHYDLLPEKRWE---VDLDGVEALADENTVAIVIINPGNP 160
GYP Y + A G L PE R + D G+ + + + +P NP
Sbjct: 124 GYPSYRQILRALG----LVPVDLPTAPENRLQPVPADFAGL------DLAGLXVASPANP 173
Query: 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISK 220
G + + A+ G I+DE+Y+ + + + + + + S SK
Sbjct: 174 TGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE---CYVINSFSK 230
Query: 221 RWIVPGWRLGWLVTSDPN-----GILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDET 275
+ GWR+GW V + I QN F+ C AS V +
Sbjct: 231 YFSXTGWRVGWXVVPEDQVRVVERIAQNX-FI-----CAPHASQ--------VAALAALD 276
Query: 276 NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFC 335
+A + + K + ER+ + T P GA +V +VS L D D F
Sbjct: 277 CDAELQANLDVYKANRKLXLERLPKA-GFTRIAPPDGAFYVYA--DVSDLTD--DSRAFA 331
Query: 336 LKLAKEESVIILPG------RTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385
++ ++ V + PG R G LR ++A A +E+GL+R++AF Q +
Sbjct: 332 AEILEKAGVAVTPGLDFDPERGAGT---LRFSYARATADIEEGLDRLEAFXQARGE 384
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 142/357 (39%), Gaps = 40/357 (11%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPR 104
Y T G R + +L + Y +S + D+ +T G QA+++ V PG +++
Sbjct: 114 YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 171
Query: 105 PGY-------PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINP 157
P Y YE + E ++L EK E+ G V +V P
Sbjct: 172 PTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQG-------KKVKVVYTVP 224
Query: 158 G--NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITL 215
NP G + + + A IV+ D+ Y L + P + + VI L
Sbjct: 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 284
Query: 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDET 275
G+ SK + PG+R+GW+V DP I + S C N F Q R VD
Sbjct: 285 GTFSK-ILAPGFRIGWMV-GDPGIIRKMEIAKQSTDLCTN------VFGQVVAWRYVDGG 336
Query: 276 N-EAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLE 333
E +I K D E ++E +P KP+G MF+ V L G D +
Sbjct: 337 YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTL------PDGIDSK 390
Query: 334 FCLKLAKEESVIILPGRTV----GMKNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385
L+ A ++ V +PG +KN +R+ F + + +G++R+ + K
Sbjct: 391 KMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 142/357 (39%), Gaps = 40/357 (11%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPR 104
Y T G R + +L + Y +S + D+ +T G QA+++ V PG +++
Sbjct: 69 YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 126
Query: 105 PGY-------PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINP 157
P Y YE + E ++L EK E+ G V +V P
Sbjct: 127 PTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQG-------KKVKVVYTVP 179
Query: 158 G--NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITL 215
NP G + + + A IV+ D+ Y L + P + + VI L
Sbjct: 180 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 239
Query: 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDET 275
G+ SK + PG+R+GW+V DP I + S C N F Q R VD
Sbjct: 240 GTFSK-ILAPGFRIGWMV-GDPGIIRKMEIAKQSTDLCTN------VFGQVVAWRYVDGG 291
Query: 276 N-EAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLE 333
E +I K D E ++E +P KP+G MF+ V L G D +
Sbjct: 292 YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD------GIDSK 345
Query: 334 FCLKLAKEESVIILPGRTV----GMKNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385
L+ A ++ V +PG +KN +R+ F + + +G++R+ + K
Sbjct: 346 KMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 34/345 (9%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y T + + D+ + Y ED+ G AI I++ + G +LI P
Sbjct: 62 YGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSP 121
Query: 106 GYPLYEIHAAGSNNNLEARHYDLLPEKR--WEVDLDGVEALADENTVAIVII-NPGNPCG 162
YP + +N L + + L E+ +++D + +E EN V + ++ NP NP G
Sbjct: 122 VYPPFARSVRLNNRKLVS---NSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGG 178
Query: 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP-----VITLGS 217
V+ + L++I + +I+++DE++ L +V F ++ P + L S
Sbjct: 179 RVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSS 235
Query: 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK-GCLNAASHPVTFIQAAVPRIVDETN 276
+K + + G T + I++N K L H V+ +
Sbjct: 236 ATKTFNIAG-------TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG 288
Query: 277 EAFFAKIIGLLKETADICYERI-KEIPCITCPVKPQGAMFVMVKLNVSMLEDIG--DDLE 333
+ + + +L+E E +E P + +KPQG + + + D G DD
Sbjct: 289 KPWLVALKAVLEENIQFAVEYFAQEAPRLKV-MKPQGTYLIWLDFS-----DYGLTDDAL 342
Query: 334 FCLKLAKEESVIILPGRTVGMKNWL--RIAFAAEPATLEDGLERI 376
F L L + VI+ G G + L R+ AA + +E+ +RI
Sbjct: 343 FTL-LHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRI 386
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 150/371 (40%), Gaps = 71/371 (19%)
Query: 51 GVPSARRGIADYLN--RDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP 108
G+P+ ++ + D++ R P + LT G + A E + LA PG +LIP P YP
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 109 LYE-------------IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV---AI 152
++ IH SN + + E L+ A++ + +
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNG------FQIT-----ETALEEAYQEAEKRNLRVKGV 195
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGS--- 208
++ NP NP G + L + + GI +I+DE+Y+ AF S ++ M V
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC 255
Query: 209 ------IVPVITLGSISKRWIVPGWRLGWLVTSDPNGI-----LQNSGFVDS-----IKG 252
V + S+SK +PG+R+G + ++D + + + G V S +
Sbjct: 256 DENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSA 315
Query: 253 CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312
L+ +I R+ K++ L+++ I+C +
Sbjct: 316 MLSDKKLTKNYIAENHKRLKQRQK-----KLVSGLQKSG------------ISC-LNGNA 357
Query: 313 AMFVMVKLNVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKN--WLRIAFAAEPA-T 368
+F V + + + + ++E K+ E + I PG + W R+ FA P T
Sbjct: 358 GLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERT 417
Query: 369 LEDGLERIKAF 379
L+ ++R+KAF
Sbjct: 418 LDLAMQRLKAF 428
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 65/365 (17%)
Query: 51 GVPSARRGIADYLN--RDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP 108
G+P+ ++ + D++ R P + LT G + A E + LA PG +LIP P YP
Sbjct: 70 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 129
Query: 109 LYE-------------IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV---AI 152
++ IH SN + + E L+ A++ + +
Sbjct: 130 GFDRDLKWRTGVEIVPIHCTSSNG------FQIT-----ETALEEAYQEAEKRNLRVKGV 178
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIV- 210
++ NP NP G + L + + GI +I+DE+Y+ AF S ++ M V V
Sbjct: 179 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVW 238
Query: 211 -PVITLGSISKRWI-VPGWRLGWLVTSDPNGI-----LQNSGFVDS-----IKGCLNAAS 258
V + S+S + + +PG+R+G + ++D + + + G V S + L+
Sbjct: 239 QRVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 298
Query: 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318
+I R+ K++ L+++ I+C + +F V
Sbjct: 299 LTKNYIAENHKRLKQRQK-----KLVSGLQKSG------------ISC-LNGNAGLFCWV 340
Query: 319 KLNVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKN--WLRIAFAAEPA-TLEDGLE 374
+ + + + ++E K+ E + I PG + W R+ FA P TL+ ++
Sbjct: 341 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQ 400
Query: 375 RIKAF 379
R+KAF
Sbjct: 401 RLKAF 405
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 150/371 (40%), Gaps = 71/371 (19%)
Query: 51 GVPSARRGIADYLN--RDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP 108
G+P+ ++ + D++ R P + LT G + A E + LA PG +LIP P YP
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 109 LYE-------------IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV---AI 152
++ IH SN + + E L+ A++ + +
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNG------FQIT-----ETALEEAYQEAEKRNLRVKGV 195
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGS--- 208
++ NP NP G + L + + GI +I+DE+Y+ AF S ++ M V
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC 255
Query: 209 ------IVPVITLGSISKRWIVPGWRLGWLVTSDPNGI-----LQNSGFVDS-----IKG 252
V + S+SK +PG+R+G + ++D + + + G V S +
Sbjct: 256 DENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSA 315
Query: 253 CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312
L+ +I R+ K++ L+++ I+C +
Sbjct: 316 MLSDKKLTKNYIAENHKRLKQRQK-----KLVSGLQKSG------------ISC-LNGNA 357
Query: 313 AMFVMVKLNVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKN--WLRIAFAAEPA-T 368
+F V + + + + ++E K+ E + I PG + W R+ FA P T
Sbjct: 358 GLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERT 417
Query: 369 LEDGLERIKAF 379
L+ ++R+KAF
Sbjct: 418 LDLAMQRLKAF 428
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 150/371 (40%), Gaps = 71/371 (19%)
Query: 51 GVPSARRGIADYLN--RDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP 108
G+P+ ++ + D++ R P + LT G + A E + LA PG +LIP P YP
Sbjct: 85 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 109 LYE-------------IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV---AI 152
++ IH SN + + E L+ A++ + +
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNG------FQIT-----ETALEEAYQEAEKRNLRVKGV 193
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGS--- 208
++ NP NP G + L + + GI +I+DE+Y+ AF S ++ M V
Sbjct: 194 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC 253
Query: 209 ------IVPVITLGSISKRWIVPGWRLGWLVTSDPNGI-----LQNSGFVDS-----IKG 252
V + S+SK +PG+R+G + ++D + + + G V S +
Sbjct: 254 DENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSA 313
Query: 253 CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312
L+ +I R+ K++ L+++ I+C +
Sbjct: 314 MLSDKKLTKNYIAENHKRLKQRQK-----KLVSGLQKSG------------ISC-LNGNA 355
Query: 313 AMFVMVKLNVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKN--WLRIAFAAEPA-T 368
+F V + + + + ++E K+ E + I PG + W R+ FA P T
Sbjct: 356 GLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERT 415
Query: 369 LEDGLERIKAF 379
L+ ++R+KAF
Sbjct: 416 LDLAMQRLKAF 426
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 153/375 (40%), Gaps = 63/375 (16%)
Query: 34 VVDALRTAHYNC--YSPTLGVPSARRGIADYLNR--DLPYKLSPEDVYLTLGCSQAIEIS 89
+ DAL + + Y T G+P R+ A++L R D + ++ LG +A+
Sbjct: 48 ITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSF 107
Query: 90 LSVLARPGAN-----ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEAL 144
+ + P ++ I+ P P Y +YE + H+ P + D +
Sbjct: 108 VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEI---HFANCPAPSFNPDWRSISEE 164
Query: 145 ADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204
+ T + + +P NP G+V +++ G I+ +DE Y+ + F P+G
Sbjct: 165 VWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK--PLG 222
Query: 205 VFGSIV-------PVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA 257
+ ++ S+S R VPG R G+ V D +L+N + G +A
Sbjct: 223 CLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGF-VAGDAE-LLKNFLLYRTYHG--SAX 278
Query: 258 SHPVTFIQAAVPRIVDETN--------EAFFAKIIGLLKETADICYERIKEIPCITCPVK 309
S PV +A++ DE + + F ++I +L++ D+
Sbjct: 279 SIPVQ--RASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKL-------------- 322
Query: 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------KNWLRIA 361
P + ++ +K+ GDDL F L ++ ++ +LPGR + + ++RIA
Sbjct: 323 PDASFYIWLKV------PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIA 376
Query: 362 FAAEPATLEDGLERI 376
A+ AT E I
Sbjct: 377 LVADVATCVKAAEDI 391
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 34/345 (9%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
YN ++ L + + D+ ++ Y + ED+ G AI I+L + G +LI
Sbjct: 94 YNYFNDDL-----YQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLI 148
Query: 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVII-NPGNPC 161
P Y + +++ L ++ R+E+D + +E +N V I ++ +P NP
Sbjct: 149 NSPVYYPFARTIRLNDHRLVENSLQII-NGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPG 207
Query: 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLA-FGSTPYVPMGVFGSIVP-VITLGSIS 219
G V+ L KIA + G+I+++DE++ LA FG+T + + S I L S +
Sbjct: 208 GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSAT 267
Query: 220 KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAF 279
K + + G T + I+QN + A + Q VP + +A
Sbjct: 268 KTFNIAG-------TKNSFAIIQNESLRRKFQYRQLANN------QHEVPTVGMIATQAA 314
Query: 280 FAKIIGLLKETADICYERIK------EIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLE 333
F L+E + IK E ++P+G V + + + +
Sbjct: 315 FQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQP----Q 370
Query: 334 FCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERI 376
KL E V++ G G K + R+ A T+++ L RI
Sbjct: 371 LSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRI 415
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 142/363 (39%), Gaps = 57/363 (15%)
Query: 51 GVPSARRGIADYL--NRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP 108
G+P R+ IA ++ R + PE V + G + A E + LA PG L+P P YP
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 109 LYE-------------IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVII 155
+ IH SNN + + + E + + ++ +++
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNN------FKITSKAVKEAYENAQK--SNIKVKGLILT 195
Query: 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG--------VFG 207
NP NP G L+ + I ++ DE+Y F + +V + +
Sbjct: 196 NPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYC 255
Query: 208 SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQA 266
+ V + S+SK +PG+R+G + + F D + C +S + Q
Sbjct: 256 NKDLVHIVYSLSKDMGLPGFRVGIIYS-----------FNDDVVNCARKMSSFGLVSTQT 304
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADICYERIK------EIPCITCPVKPQGAMFVMVKL 320
++E F + L+E+A +R K E+ I C +K +F + L
Sbjct: 305 QYFLAAMLSDEKF---VDNFLRESAMRLGKRHKHFTNGLEVVGIKC-LKNNAGLFCWMDL 360
Query: 321 NVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKN--WLRIAFA-AEPATLEDGLERI 376
+ E D ++ + + + + PG + + W R+ FA + T++ L RI
Sbjct: 361 RPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI 420
Query: 377 KAF 379
+ F
Sbjct: 421 RRF 423
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF--GSTP-YVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F G P ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSKI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF--GSTP-YVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F G P ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSKI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS---TPYVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSKI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 141/345 (40%), Gaps = 24/345 (6%)
Query: 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILI 102
+ YS + G+P RR I+ + ++ PE + +T+G + + + G IL+
Sbjct: 69 HGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILV 128
Query: 103 PRPGYPLYEIHAAGSN-NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161
P P YP IH G+ + R L+P + +L+ + +++ P NP
Sbjct: 129 PNPSYP---IHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPT 185
Query: 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSIS 219
+++ A+ ++V+ D Y + + P + M V G+ + ++S
Sbjct: 186 AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSI-MQVPGAKDIAVEFFTLS 244
Query: 220 KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVD-ETNEA 278
K + + GWR+G++V N V ++ + + TF V I E ++
Sbjct: 245 KSYNMAGWRIGFMVG--------NPELVSALARIKSYHDYG-TFTPLQVAAIAALEGDQQ 295
Query: 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL 338
I ++ D+ + ++E + P+ +M+V K+ +G LEF KL
Sbjct: 296 CVRDIARQYQQRRDVLVKGLREAGWMV--ENPKASMYVWAKIPEPYAH-LG-SLEFAKKL 351
Query: 339 AKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIKAFCQ 381
++ V + PG G + +R A L + IKA +
Sbjct: 352 LQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFR 396
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS---TPYVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSKI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS---TPYVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS---TPYVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 253 GRVIRADSFSKI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 404
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 145/354 (40%), Gaps = 26/354 (7%)
Query: 34 VVDALRTA-HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92
++D+L+ Y T S I ++L R +K+ E + + G AI + ++
Sbjct: 50 IIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINE 109
Query: 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152
L + I+I P Y + +N L L + +D + +E ++
Sbjct: 110 LTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLF 168
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP- 211
++ NP NP G V++ L+K+ + +I+DE+++ + ++PM
Sbjct: 169 ILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEK 228
Query: 212 -VITLGSISKRWIVPGWRLGWLVTSDPNG--ILQNSGFVDSIK--GCLNAASHPVTFIQA 266
IT + +K + + G + ++V D +L ++ IK C + + ++
Sbjct: 229 NTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASY--- 285
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSML 325
E++ + L+ D + I E +P + KP+G + V + L
Sbjct: 286 -------NNGESWLESFLEYLESNIDFAIKYINENMPKLKVR-KPEGTYLLWVDFSALGL 337
Query: 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIK 377
D ++LE L ++ V + G + G+ + RI A + LE+ L RIK
Sbjct: 338 SD--EELESI--LVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIK 387
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 46 YSPTLGVP---SARRGIADYLNRDLPYKLSPE----DVYLTLGCSQAIEISLSVLARPGA 98
YSP+ G+P S + + L+ P D+ +T G Q + ++ PG
Sbjct: 76 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 99 NILIPRPGYP--LYEIHAAGSNN-NLEARHYDLLPEK------RWEVDLDGVEALADENT 149
N+L+ P Y L +H G N N+ + ++P+ RW+ + D +
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 194
Query: 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS---TPYVPMGVF 206
+ N NP GN + + ++I AR ++I D+ Y L F ++ M V
Sbjct: 195 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 254
Query: 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS-HPVTFIQ 265
G ++ + I I G R+G+L P ++ + + ++ HP TF Q
Sbjct: 255 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 302
Query: 266 AAVPRIVDETNEAFFA----KIIGLLKETAD-ICYERIKEIPCITCPVKPQGAMFVMVKL 320
+ +++ E E F ++I D I K + + P MF+ +K
Sbjct: 303 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 361
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKN-----WLRIAFAA 364
++ I D E + A + V++LPG + + +LR +F++
Sbjct: 362 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS 406
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 41/339 (12%)
Query: 67 LPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE---- 122
L + + P+++ LT G A ++ A A+ + +PL + +++ LE
Sbjct: 92 LGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLF 151
Query: 123 --AR-HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179
AR + +LLPE +++ +D E T I + P NP GNV + + L K+ R A
Sbjct: 152 VSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQ 211
Query: 180 LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP-----VITLGSISKRWIVPGWRLGWLVT 234
I ++ D Y P+ P +F P +I S+SK + PG R G ++
Sbjct: 212 HNIPLVIDNAY------GVPF-PGIIFSEARPLWNPNIILCXSLSKLGL-PGSRCGIIIA 263
Query: 235 SDP--NGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETAD 292
+D I +G + G A + + R+ + + F+ + + ++T
Sbjct: 264 NDKTITAIANXNGIISLAPGGXGPAXXCEXIKRNDLLRLSETVIKPFYYQRV---QQTIA 320
Query: 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV 352
I + E C+ KP+GA+F+ + +D+ E + K V+ +PG
Sbjct: 321 IIRRYLSEERCLIH--KPEGAIFLWL-----WFKDLPITTELLYQRLKARGVLXVPGHYF 373
Query: 353 --GM-KNW------LRIAFAAEPATLEDGLERIKAFCQR 382
G+ K W R + EP +E G++ + +R
Sbjct: 374 FPGLDKPWPHTHQCXRXNYVPEPDKIEAGVKILAEEIER 412
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 139/333 (41%), Gaps = 35/333 (10%)
Query: 59 IADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN 118
I ++ + + + E + + G A+ S+ + ++L+ P YP + +N
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPF-FEXVTTN 126
Query: 119 NNLEARHYDLLPEKR----WEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIA 174
N R + P ++ + +D + +E + ++ +P NP G V+ + L K+
Sbjct: 127 N----RQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLG 182
Query: 175 RTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP--VITLGSISKRWIVPGWRLGWL 232
+IV+ADE+++ + + + P + IT + S + + G + +
Sbjct: 183 SLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASII 242
Query: 233 VTSDPNGILQNS-GFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETA 291
+ PN L+ + + +G T Q+A D NE F +++ A
Sbjct: 243 II--PNEKLRQAFTSIQYRQGFHGLNIFAYTAXQSAYTECNDWLNEIRF-----YIEDNA 295
Query: 292 DICYERIKE-IPCITCPVKPQGAMFVMVK---LNVSMLEDIGDDLEFCLKLAKEE-SVII 346
E IK+ IP ++ KP+G+ + + LN+S E KL +E+ +I+
Sbjct: 296 KFACEYIKDHIPTLSV-XKPEGSFLLWIDCSALNLSQDERT--------KLLEEKGKIIV 346
Query: 347 LPGRTVGM--KNWLRIAFAAEPATLEDGLERIK 377
PG G+ + + I + LE+ L R++
Sbjct: 347 EPGEKYGLGGEEHIGINIGCPRSVLEEILNRLR 379
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 141/357 (39%), Gaps = 30/357 (8%)
Query: 33 AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92
A+ DA++ + Y P + S + A++ Y+ PE ++ + + I++
Sbjct: 44 AITDAVQREAFG-YQPDGSLLS--QATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDH 100
Query: 93 LARPGANILIPRPGYP-LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA 151
+ +++P P YP + + +A + + ++L VE +
Sbjct: 101 FTPAQSKVIVPTPAYPPFFHLLSATQREGI-------FIDATGGINLHDVEKGFQAGARS 153
Query: 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP 211
I++ NP NP G VF+ + L ++ A V+ DE++ L F V GV +
Sbjct: 154 ILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAAS 213
Query: 212 V-ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPR 270
V IT+ + S W + G + ++ S+P+ IK A++ + +AA
Sbjct: 214 VCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKD--GASTLGLIAAEAAYRY 271
Query: 271 IVDETNEAFFAKIIGLLKETADICYERI-KEIPCITCPVKPQGAMFVM-VKLNVSMLEDI 328
D F + + LK D I K IP + P A ++ + + +E
Sbjct: 272 GTD-----FLNQEVAYLKNNHDFLLHEIPKRIP--GAKITPXQATYLXWIDFRDTTIE-- 322
Query: 329 GDDLEFCLKLAKEESVIILPGRTVGMK--NWLRIAFAAEPATLEDGLERIKAFCQRH 383
G EF ++ AK V G G + R+ FA LE+ ++R H
Sbjct: 323 GSPSEFFIEKAK---VAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDRXAKAVSHH 376
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 59 IADYLNRDLPYK----LSPEDVYLTLGCSQAIEISLSVLA-----RPGANILIPRPGY-P 108
I +Y ++L YK D++ T G + AI + LA + G I I P + P
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 109 LYEIHAAGSNNNLEARHYDLLP-------EKRWEVDLDGVEALADENTVAIVIINPGNPC 161
I E + Y+L+ + WE++ + +E L D + A++++NP NP
Sbjct: 206 YLRIP--------ELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPT 257
Query: 162 GNVFSYQHLQKIARTA-RNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVIT--LGS 217
F L I + +N + +I+DEVY +VP S+VP T + S
Sbjct: 258 SKEFDTNALNAIKQAVEKNPKLXIISDEVYG-------AFVPNFKSIYSVVPYNTXLVYS 310
Query: 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251
S + GWRLG + ++ N N +D ++
Sbjct: 311 YSXLFGCTGWRLGVIALNEKNVFDDNIAHLDKVE 344
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 152/392 (38%), Gaps = 55/392 (14%)
Query: 6 GQETRHSPWPRRPLGVSLLSDSTVAE--DAVVDALRTAHYNCYSPTLGVPSARRGIADYL 63
G++ H P P V + T D AL Y G + ++ I D+
Sbjct: 39 GRKIEHGPLPLINXAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFY 98
Query: 64 NRDLPYKLSPED-VYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNN--- 119
R L ED V + G + + + PG +L+P PGY Y ++
Sbjct: 99 QRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPV 158
Query: 120 --NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTA 177
NLE HY LP D V++ + T I + P NP G+ + + +
Sbjct: 159 PLNLEPPHY--LP------DWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKF 210
Query: 178 RNLGIIVIADEVYNHLAF-GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV-TS 235
+ ++ D Y F P + G V I + S+SK + G+R+G+ V
Sbjct: 211 KGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSLSKGYNXSGFRVGFAVGNK 269
Query: 236 DPNGILQ------NSGFVDSIK-GCLNAASHPVTFI--QAAVPRIVDETNEAFFAKIIGL 286
D L+ N+G +++ + A +H F+ Q+ V + + EA AK
Sbjct: 270 DXIQALKKYQTHTNAGXFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAXLAK---- 325
Query: 287 LKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII 346
AD+ + V +G ++V ++ D +F L +E+S+++
Sbjct: 326 ----ADLPF------------VHAKGGIYVWLETPPGY-----DSEQFEQFLVQEKSILV 364
Query: 347 LPGRTVGMKN--WLRIAFAAEPATLEDGLERI 376
PG+ G ++RI+ A + L++ R+
Sbjct: 365 APGKPFGENGNRYVRISLALDDQKLDEAAIRL 396
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 99/267 (37%), Gaps = 29/267 (10%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
Y+ Y G R IA L + +DV+++ G I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAV 147
Query: 103 PRPGYPLYE----IHAAGSNNNLEARHYDLL------PEKRWEVDLDGVEALADENTVAI 152
P YP Y I N + + Y + PE + DL V T I
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212
+P NP G + + L ++ A+ G I++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS------IKGCLNAASHPVTFIQA 266
+ S SK G RLGW V P +L + GF + I C N AS+
Sbjct: 263 METASFSKYAGFTGVRLGWTVI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQ--AG 318
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADI 293
A+ + E EA K+IG KE +I
Sbjct: 319 ALACLTPEGLEAMH-KVIGFYKENTNI 344
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 35/243 (14%)
Query: 71 LSPEDVYLTLGCSQAIEISLSVLARPGAN-ILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129
+ PE V ++ G + IE+ + PG + IL P Y +Y + A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA--ETIGVECRTVPTL 130
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189
W++DL G+ D V + + +P NP G + + Q + + R IV+ADE
Sbjct: 131 --DNWQLDLQGISDKLDGVKV-VYVCSPNNPTGQLINPQDFRTLLELTRGKA-IVVADEA 186
Query: 190 YNHLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248
Y P + + + P + L ++SK + + G R G+ L N ++
Sbjct: 187 YIEFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGF--------TLANEEVIN 234
Query: 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAK-IIGLLKETADICYER------IKEI 301
+ + A +P++ P + D +A + I+ + + A I ER +KEI
Sbjct: 235 LLMKVI--APYPLS-----TP-VADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI 286
Query: 302 PCI 304
PC+
Sbjct: 287 PCV 289
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 131 EKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 190
E R +DL G+E + NP NP G V+S + + +IA A G VIAD++Y
Sbjct: 162 ETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLY 221
Query: 191 NHLAFGSTPYVPMGVFGSIVP--VITLGSISKRWIVPGWRLG 230
+ L + Y + ++ V+T+ S + G+RLG
Sbjct: 222 SRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 33 AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92
A VD + T N Y P R +A Y+ + ++ ++++ G ++ ++ L
Sbjct: 51 ATVDKIAT-ELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 108
Query: 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKR---WEVDLD-GVEALADEN 148
PG L +P Y ++ I A G+ H + + R + +D+D +E + +
Sbjct: 109 FGGPGRTALGFQPSYSMHPILAKGT-------HTEFIAVSRGADFRIDMDVALEEIRAKQ 161
Query: 149 TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208
+ + P NP G+V S +++I A IVI DE Y F +P +
Sbjct: 162 PDIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKY 216
Query: 209 IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250
++ ++SK + G RLG+ V N F+D++
Sbjct: 217 PTKLVVSRTMSKAFDFAGGRLGYFVA--------NPAFIDAV 250
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 99/267 (37%), Gaps = 29/267 (10%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
Y+ Y G R IA L + +DV+++ G I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAV 147
Query: 103 PRPGYPLYE----IHAAGSNNNLEARHYDLL------PEKRWEVDLDGVEALADENTVAI 152
P YP Y I N + + Y + PE + DL V T I
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212
+P NP G + + L ++ A+ G I++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS------IKGCLNAASHPVTFIQA 266
+ S S+ G RLGW V P +L + GF + I C N AS+
Sbjct: 263 METASFSQYAGFTGVRLGWTVI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQ--AG 318
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADI 293
A+ + E EA K+IG KE +I
Sbjct: 319 ALACLTPEGLEAMH-KVIGFYKENTNI 344
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 33 AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92
A VD + T N Y P R +A Y+ + ++ ++++ G ++ ++ L
Sbjct: 54 ATVDKIAT-ELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111
Query: 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKR---WEVDLD-GVEALADEN 148
PG L +P Y ++ I A G+ H + + R + +D+D +E + +
Sbjct: 112 FGGPGRTALGFQPSYSMHPILAKGT-------HTEFIAVSRGADFRIDMDVALEEIRAKQ 164
Query: 149 TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208
+ + P NP G+V S +++I A IVI DE Y F +P +
Sbjct: 165 PDIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKY 219
Query: 209 IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250
++ ++SK + G RLG+ V N F+D++
Sbjct: 220 PTKLVVSRTMSKAFDFAGGRLGYFVA--------NPAFIDAV 253
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 98/267 (36%), Gaps = 29/267 (10%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
Y+ Y G R IA L + +DV+++ G I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAV 147
Query: 103 PRPGYPLYE----IHAAGSNNNLEARHYDLL------PEKRWEVDLDGVEALADENTVAI 152
P YP Y I N + + Y + PE + DL V T I
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212
+P NP G + + L ++ A+ G I++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS------IKGCLNAASHPVTFIQA 266
+ S S G RLGW V P +L + GF + I C N AS+
Sbjct: 263 METASFSNYAGFTGVRLGWTVI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQ--AG 318
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADI 293
A+ + E EA K+IG KE +I
Sbjct: 319 ALACLTPEGLEAMH-KVIGFYKENTNI 344
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 97/267 (36%), Gaps = 29/267 (10%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
Y+ Y G R IA L + +DV+++ G I L V I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDIS-RLQVXFGSNVTIAV 147
Query: 103 PRPGYPLYE----IHAAGSNNNLEARHYDLL------PEKRWEVDLDGVEALADENTVAI 152
P YP Y I N + + Y + PE + DL V T I
Sbjct: 148 QDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPDLSTVG-----RTDII 202
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212
+P NP G + + L ++ A+ G I++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVA 262
Query: 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS------IKGCLNAASHPVTFIQA 266
S SK G RLGW V P +L + GF + I C N AS+
Sbjct: 263 XETASFSKYAGFTGVRLGWTVI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQ--AG 318
Query: 267 AVPRIVDETNEAFFAKIIGLLKETADI 293
A+ + E EA K+IG KE +I
Sbjct: 319 ALACLTPEGLEAXH-KVIGFYKENTNI 344
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102
Y Y G + R+ IA+ RDL K +V+++ G I L +L I +
Sbjct: 105 YRGYGLEQGNKTLRKAIAETFYRDLHVK--SNEVFVSDGAQSDIS-RLQLLLGSNVTIAV 161
Query: 103 PRPGYPLYE-----IHAAGSNNNLEARHYDLL-----PEKRWEVDLDGVEALADENTVAI 152
P +P Y I G + ++ +++ P + DL A+ V I
Sbjct: 162 QDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL----AMTPRTDV-I 216
Query: 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212
+P NP G V S + L ++ A+ G I+I D Y +P + G+
Sbjct: 217 FFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVA 276
Query: 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246
I + S SK G RLGW + P+ +L ++GF
Sbjct: 277 IEVSSFSKFAGFTGVRLGWSII--PDELLYSNGF 308
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 35/243 (14%)
Query: 71 LSPEDVYLTLGCSQAIEISLSVLARPGAN-ILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129
+ PE V ++ G + IE+ + PG + IL P Y Y + A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSA--ETIGVECRTVPTL 130
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189
W++DL G+ D V + + +P NP G + + Q + + R IV+ADE
Sbjct: 131 --DNWQLDLQGISDKLDGVKV-VYVCSPNNPTGQLINPQDFRTLLELTRGKA-IVVADEA 186
Query: 190 YNHLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248
Y P + + + P + L ++SK + + G R G+ L N ++
Sbjct: 187 YIEFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGF--------TLANEEVIN 234
Query: 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAK-IIGLLKETADICYER------IKEI 301
+ + A +P++ P + D +A + I+ + A I ER +KEI
Sbjct: 235 LLXKVI--APYPLS-----TP-VADIAAQALSPQGIVAXRERVAQIIAEREYLIAALKEI 286
Query: 302 PCI 304
PC+
Sbjct: 287 PCV 289
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 63 LNRDLPYKLSPEDVYLTLG--CSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNN 120
LN+ + L +D+ + LG S+ IE+S+S+ + ILI P Y YEI+A +
Sbjct: 66 LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSYAEYEINAKKHGVS 121
Query: 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL 180
+ + D + +D + + + D+ +++I NP NP G + + + + + A
Sbjct: 122 VVFSYLD----ENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEK 176
Query: 181 GIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237
+I DE + + F P +G + + + +++K + +PG R G+ +T++
Sbjct: 177 KKTIIIDEAF--IEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 33 AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92
A VD + T N Y P R +A Y+ + ++ ++++ G ++ ++ L
Sbjct: 54 ATVDKIAT-ELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111
Query: 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKR---WEVDLD-GVEALADEN 148
PG L +P Y ++ I A G+ H + + R + +D+D +E + +
Sbjct: 112 FGGPGRTALGFQPSYSMHPILAKGT-------HTEFIAVSRGADFRIDMDVALEEIRAKQ 164
Query: 149 TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208
+ + P NP G+V S +++I A IVI DE Y F +P +
Sbjct: 165 PDIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKY 219
Query: 209 IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250
++ ++S + G RLG+ V N F+D++
Sbjct: 220 PTKLVVSRTMSXAFDFAGGRLGYFVA--------NPAFIDAV 253
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH 113
S R+ +AD+ Y+L E++ T G + IE+ VL N + P + Y +
Sbjct: 71 SLRKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQN 124
Query: 114 AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKI 173
A E R LL + E DL+G DE T + I NP NP GN +Q
Sbjct: 125 ALIEG--AEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAF 180
Query: 174 ARTARNLGIIVIADEVY 190
+ ++V+ DE Y
Sbjct: 181 LDRVPS-DVLVVLDEAY 196
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 140/365 (38%), Gaps = 43/365 (11%)
Query: 34 VVDALR--TAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI--S 89
+ DAL+ T N Y + S R + R +L ++ TLG + + S
Sbjct: 41 IQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS 100
Query: 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT 149
+ I P P Y +YE G+ ++A+ LL E D +
Sbjct: 101 FVLFDYQNPTIAYPNPFYQIYE----GAAKFIKAK--SLLXPLTKENDFTPSLNEKELQE 154
Query: 150 VAIVIIN-PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP-----YVPM 203
V +VI+N P NP G S + L + A I+I DE Y+ + + P +
Sbjct: 155 VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXL 214
Query: 204 GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTF 263
+ V+ + S+SKR PG R G++ + +L+ + G +A +
Sbjct: 215 AGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD--SRLLEKYKAFRAYLGYTSANA----I 268
Query: 264 IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323
+A+ +D+ + FF I + A ++ P + +V +
Sbjct: 269 QKASEAAWLDDRHAEFFRNIYANNLKLARKIFKNTLIYPY---------SFYVYL----- 314
Query: 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGMK----NWLRIAFAAEPATLEDGLERIKAF 379
+ + F L + E +I LP +G +++R+A + LE LE I+ +
Sbjct: 315 ---PVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETY 371
Query: 380 CQRHA 384
+ HA
Sbjct: 372 RENHA 376
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 20/261 (7%)
Query: 80 LGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLD 139
+G + + L L P +L+P YP Y G+ R + + + DL
Sbjct: 94 IGSQEGLAHLLLALTEPEDLLLLPEVAYPSY----FGAARVASLRTFLIPLREDGLADLK 149
Query: 140 GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP 199
V +++ P NP G V + + ++ AR G+ +I D Y +
Sbjct: 150 AVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEA 209
Query: 200 YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASH 259
P+ + G+ V+ L S+SK + + G+RLG+ + S+ + ++ +KG ++ +
Sbjct: 210 PSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE-----EALARLERVKGVIDFNQY 264
Query: 260 PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVK 319
A V R+ E + + G + + + + + + P+ M++ +
Sbjct: 265 ------AGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGVLSLLPPRATMYLWGR 318
Query: 320 LNVSMLEDIGDDLEFCLKLAK 340
L + DDLEF L+L +
Sbjct: 319 LPEGV-----DDLEFGLRLVE 334
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 101 LIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160
+I PG+ E A + + E R + L W++ +EAL + + + P NP
Sbjct: 102 MIVTPGFA--EYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNP 158
Query: 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISK 220
G + LQ IA ++L I +I DE + T ++P + L S++K
Sbjct: 159 TGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTK 216
Query: 221 RWIVPGWRLGWLVTSD 236
+ +PG RLG+LV SD
Sbjct: 217 FYAIPGLRLGYLVNSD 232
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105
Y P G+P+ R+ +++ R + ++++++ G + LS P + I P
Sbjct: 71 YGPDFGLPALRQKLSEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDP 126
Query: 106 GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165
YP Y + A E L E + + D + + + +P NP G V
Sbjct: 127 SYPAY-LDIARLTGAKEIIALPCLQENAFFPEFP-----EDTHIDILCLCSPNNPTGTVL 180
Query: 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF---GSIVPVITLGSISKRW 222
+ L+ I A I+++ D Y+ F S P +P +F + I + S SK
Sbjct: 181 NKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPL 238
Query: 223 IVPGWRLGWLV 233
G RLGW V
Sbjct: 239 GFAGIRLGWTV 249
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 57 RGIADYLNRDLPYKLSPEDVYLTL--GCSQAIEISLSVLARPGANILIPRPGYPLYEIHA 114
+ +AD+ ++ ++ P++ + G AI + PG IL+ P Y + ++
Sbjct: 69 KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXF--YS 124
Query: 115 AGSNNNLEARHYDLLPEK-RWEVDL-DGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172
N DL+ E ++ V+ D E LA + V NP NP G +S + +++
Sbjct: 125 VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKR 184
Query: 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV 224
IA +++I+DE++ L I P T+ +K W+V
Sbjct: 185 IAELCAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 56 RRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA 115
++ + ++ + + + + T G A+ ++ +PG ++I P Y Y A
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVY--YPFFMA 129
Query: 116 GSNNNLEARHYDLLPEK-RWEVDLDGVEALA-DENTVAIVIINPGNPCGNVFSYQHLQKI 173
N + +LL + + +D +E L+ D+N A++ +P NP G V+ LQKI
Sbjct: 130 IKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKI 189
Query: 174 ARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI-----VPVITLGSISKRWIVPGWR 228
+++ +DE++ L P VF SI IT + SK + + G
Sbjct: 190 KDIVLKSDLMLWSDEIHFDLIM---PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMG 246
Query: 229 LGWLVTSDPN 238
+ ++ +P+
Sbjct: 247 MSNIIIKNPD 256
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP---EKR---WEVDLDGVEA-LAD 146
+ G ++I P Y + +E ++P EK+ W D+ +EA LA
Sbjct: 108 SETGEGVVIHTPAYDAF-------YKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160
Query: 147 ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG-V 205
+++ +P NP G V++ L+ +A G+ VI+DE++ + +G P++P V
Sbjct: 161 PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220
Query: 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS----GFVDSIKGCLNAASHPV 261
++T G SK + +P + GI++NS ++ ++KG +S V
Sbjct: 221 ARGDWALLTSG--SKSFNIPA-------LTGAYGIIENSSSRDAYLSALKGRDGLSSPSV 271
Query: 262 TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK-EIPCITCPVKPQGAMFVMVKL 320
+ A + + + + LK+ +++ P + + PQ + L
Sbjct: 272 LALTAHIAAY--QQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQI-PQSTYLAWLDL 328
Query: 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGL 373
+ DD L ++E V I+PG T G + ++R+ + LE G+
Sbjct: 329 RPLNI----DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGV 379
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRW 134
+V L G + I ARPGA + P PG+ Y A + LE L R
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFA--GLEFVGVPL----RA 140
Query: 135 EVDLD---GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN--LGIIVIADEV 189
+ LD + A A+ + + P NP GN+F + I R A+ +V+ DE
Sbjct: 141 DFTLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEA 200
Query: 190 YNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242
Y A S + FG+++ T+ + + G RLG+ V DP + Q
Sbjct: 201 YQPFAQESW-XSRLTDFGNLLVXRTVSKLG----LAGIRLGY-VAGDPQWLEQ 247
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 59 IADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN 118
I YL+ D LS +V + G + I + + + R ++ P P Y Y I A
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAKA-- 115
Query: 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178
+ A+ ++ K DL E E V + I NP NP G+VF + +++I +T
Sbjct: 116 --VGAKFLEVPLTK----DLRIPEVNVGEGDV-VFIPNPNNPTGHVFEREEIERILKT-- 166
Query: 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236
G V DE Y F YV + + + SK + + R+G++V S+
Sbjct: 167 --GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 59 IADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN 118
I YL+ D LS +V + G + I + + + R ++ P P Y Y I A
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAKA-- 127
Query: 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178
+ A+ ++ K DL E E V + I NP NP G+VF + +++I +T
Sbjct: 128 --VGAKFLEVPLTK----DLRIPEVNVGEGDV-VFIPNPNNPTGHVFEREEIERILKT-- 178
Query: 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236
G V DE Y F YV + + + SK + + R+G++V S+
Sbjct: 179 --GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 230
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP 211
+ I NP NP G+VF + +++I +T G V DE Y F YV
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKT----GAFVALDEAY--YEFHGESYVDF--LKKYEN 193
Query: 212 VITLGSISKRWIVPGWRLGWLVTSD 236
+ + + SK + + R+G++V S+
Sbjct: 194 LAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 65/170 (38%), Gaps = 25/170 (14%)
Query: 46 YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN------ 99
YS G + + + NR + L+ E++ LT G A ++ N
Sbjct: 79 YSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDK 138
Query: 100 --------ILIP-RPGYPLY-EIHAAGSNNNLEARHYDLLPEK------RWEVDLDGVE- 142
IL+P P Y Y ++H G + H D + ++ VD + +E
Sbjct: 139 ESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198
Query: 143 --ALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 190
AL + AI P NP GNV + + +A A+ I +I D Y
Sbjct: 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 94/246 (38%), Gaps = 32/246 (13%)
Query: 74 EDVYLTLGCSQAI-EISLSVLARPGANILIPRPGYPLY-----EIHAAGSNNNLEARHYD 127
++++++ G I I + ++P + + P YP+Y + G +N +
Sbjct: 133 DEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIE 190
Query: 128 LL---PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184
+ P+ + DL + T I +P NP G + L ++ AR G I+
Sbjct: 191 YMVCNPDNHFFPDLSKAK-----RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSIL 245
Query: 185 IADEVYNHLAFGSTPYVPMGVF---GSIVPVITLGSISKRWIVPGWRLGWLVTSD----P 237
+ D Y + S P P ++ G+ I S SK G RLGW V
Sbjct: 246 VYDAAY--ALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYA 303
Query: 238 NGILQNSGFVDSIKGCLNAASHPVTFIQAAV--PRIVDETNEAFFAKIIGLLKETADICY 295
NG ++ + + C N AS+ V A P + E N +I KE A I
Sbjct: 304 NGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN-----AMIKFYKENAQILK 358
Query: 296 ERIKEI 301
E+
Sbjct: 359 TTFTEM 364
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 18 PLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVY 77
PLG S + + A DAVV A R A LG A +++ +
Sbjct: 27 PLGXSPKAQA-AARDAVVKANRYAKNEIL--XLGNKLAAH-----------HQVEAPSIL 72
Query: 78 LTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNL-EARHYDLLPEKRWEV 136
LT G S+ I ++ A A ++IP Y E A + + + + D W
Sbjct: 73 LTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLD-----NWAF 127
Query: 137 DLDGVEAL--ADENTVAIVIINPGNPCGNVFSYQHLQK-IARTARNLGIIVIADEVYNHL 193
D++G++A A + ++NP NP G + ++ IA N IV DE Y
Sbjct: 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTXFIV--DEAY--- 182
Query: 194 AFGSTPYVPMGVFGSIVPVITLG--------SISKRWIVPGWRLGWLV 233
+V F SI P IT G + SK G R+G+ V
Sbjct: 183 ----AEFVNDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAV 226
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 85 AIEISLSVLARPGANILIPRP--GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE 142
AI +L L RPG +L+ G+ +H ++ RH D+ DL +E
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGHTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 143 ALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV 201
A T I +P NP ++ + +A+ AR G V+ D Y TPY+
Sbjct: 145 AAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTY------CTPYL 194
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 90/240 (37%), Gaps = 24/240 (10%)
Query: 12 SPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPS----ARRGIADYLNRDL 67
+ + R GV L + + + LR + Y G+P A R ++N D+
Sbjct: 44 TKFCRXEXGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDI 103
Query: 68 PYKLSPEDVYLTLGCSQAIEISLSVLARPGAN----ILIPRPGYPLYEIHAAGSNNNLEA 123
P + T+G Q +S V R N L PG+ L ++ E+
Sbjct: 104 PARACVP----TVGSXQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFES 159
Query: 124 RHYDLLPEKRWEVDLDGVEA-LADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGI 182
+DL E R E + +E+ L +I+ NP NP + + L+ I A +
Sbjct: 160 --FDLF-EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCXTDEELRIIGELATKHDV 216
Query: 183 IVIADEVYNHLAF-------GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235
IVI D Y F G Y P + ++ L S S + G R+G L S
Sbjct: 217 IVIEDLAYFGXDFRKDYSHPGEPLYQPSVANYTDNYILALSS-SXAFSYAGQRIGVLXIS 275
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 24/122 (19%)
Query: 85 AIEISLSVLARPGANILIPRPGYPLYE-----IHAAGSNNNLEARHYDLLPEKRWEVDLD 139
AI +L L RPG +L+ G LY +H ++ RH D+ DL
Sbjct: 92 AITSTLWTLLRPGDEVLL---GNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQ 141
Query: 140 GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP 199
+EA T I +P NP ++ + +A+ AR G V+ D Y TP
Sbjct: 142 ALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTY------CTP 192
Query: 200 YV 201
Y+
Sbjct: 193 YL 194
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 24/122 (19%)
Query: 85 AIEISLSVLARPGANILIPRPGYPLYE-----IHAAGSNNNLEARHYDLLPEKRWEVDLD 139
AI +L L RPG +L+ G LY +H ++ RH D+ DL
Sbjct: 92 AITSTLWTLLRPGDEVLL---GNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQ 141
Query: 140 GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP 199
+EA T I +P NP ++ + +A+ AR G V+ D Y TP
Sbjct: 142 ALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTY------CTP 192
Query: 200 YV 201
Y+
Sbjct: 193 YL 194
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR--TARNLGIIVIAD 187
P W+ ++ L D +NP NP + L+++ + ++++ D
Sbjct: 227 PALNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTD 286
Query: 188 EVYNHLAFGSTPYVPMGVFGSIVPVITL--GSISKRWIVPGWRLGWLVTSDPN 238
+VY A G +I P TL S SK + GWRLG + N
Sbjct: 287 DVYGTFADGFQSLF------AICPANTLLVYSFSKYFGATGWRLGVVAAHKEN 333
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR--TARNLGIIVIAD 187
P+ W+ ++ L D + +NP NP + L ++ + ++++ D
Sbjct: 226 PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTD 285
Query: 188 EVYNHLA--FGSTPYVPMGVFGSIVPVITL--GSISKRWIVPGWRLGWLVTSDPN 238
+VY A F S S+ P TL S SK + GWRLG + N
Sbjct: 286 DVYGTFADEFQS--------LFSVCPRNTLLVYSFSKYFGATGWRLGVIAAHKDN 332
>pdb|1P3W|B Chain B, X-Ray Crystal Structure Of E. Coli Iscs
pdb|1P3W|A Chain A, X-Ray Crystal Structure Of E. Coli Iscs
Length = 404
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 41 AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ----AIEISLSVLARP 96
+H + V AR IAD + D P ++ T G ++ AI+ + + +
Sbjct: 40 SHRFGWQAEEAVDIARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKK 93
Query: 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYD---LLPEKRWEVDLDGVEALADENTVAIV 153
G +I+ + + + LE ++ L P++ +DL +EA ++T+ +
Sbjct: 94 GKHIITSKTEHKA----VLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVS 149
Query: 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187
I++ N G V Q + I R GII D
Sbjct: 150 IMHVNNEIGVV---QDIAAIGEMCRARGIIYHVD 180
>pdb|3LVJ|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVJ|B Chain B, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVK|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 2)
pdb|3LVL|B Chain B, Crystal Structure Of E.Coli Iscs-Iscu Complex
pdb|3LVM|A Chain A, Crystal Structure Of E.Coli Iscs
pdb|3LVM|B Chain B, Crystal Structure Of E.Coli Iscs
Length = 423
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 41 AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ----AIEISLSVLARP 96
+H + V AR IAD + D P ++ T G ++ AI+ + + +
Sbjct: 59 SHRFGWQAEEAVDIARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKK 112
Query: 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYD---LLPEKRWEVDLDGVEALADENTVAIV 153
G +I+ + + + LE ++ L P++ +DL +EA ++T+ +
Sbjct: 113 GKHIITSKTEHKA----VLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVS 168
Query: 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187
I++ N G V Q + I R GII D
Sbjct: 169 IMHVNNEIGVV---QDIAAIGEMCRARGIIYHVD 199
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8C|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8D|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase
pdb|4E8D|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase
Length = 595
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 123 ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ---HLQKIARTARN 179
A HY +P + W L ++AL V N PC F ++ L+K + A++
Sbjct: 23 AIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQD 82
Query: 180 LGIIVI 185
LG+ I
Sbjct: 83 LGLYAI 88
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 22/119 (18%)
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL------GII 183
P W+ ++ L D +NP NP + L+++ RN+ ++
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERV----RNIVAEHRPDLM 282
Query: 184 VIADEVYNHLA--FGSTPYVPMGVFGSIVPVITL--GSISKRWIVPGWRLGWLVTSDPN 238
++ D+VY A F S +I P TL S SK + GWRLG + N
Sbjct: 283 ILTDDVYGTFADDFQS--------LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 22/119 (18%)
Query: 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL------GII 183
P W+ ++ L D +NP NP + L+++ RN+ ++
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERV----RNIVAEHRPDLM 282
Query: 184 VIADEVYNHLA--FGSTPYVPMGVFGSIVPVITL--GSISKRWIVPGWRLGWLVTSDPN 238
++ D+VY A F S +I P TL S SK + GWRLG + N
Sbjct: 283 ILTDDVYGTFADDFQS--------LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2CTZ|A Chain A, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
pdb|2CTZ|B Chain B, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
Length = 421
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE---AL 144
++L+ LA+ G NI + P LY G+ N + L E R+ + E AL
Sbjct: 88 LALTTLAQAGDNI-VSTPN--LY----GGTFNQFKVTLKRLGIEVRFTSREERPEEFLAL 140
Query: 145 ADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191
DE T A + + GNP N+ L+ +A+ AR G+ +I D +
Sbjct: 141 TDEKTRAWWVESIGNPALNI---PDLEALAQAAREKGVALIVDNTFG 184
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178
++ RH +L P ++VDL V+ ++NTV +V P P G + L KIA+ +
Sbjct: 180 MKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYK 236
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178
++ RH +L P ++VDL V+ ++NTV +V P P G + L KIA+ +
Sbjct: 180 MKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYK 236
>pdb|1MWO|A Chain A, Crystal Structure Analysis Of The Hyperthermostable
Pyrocoocus Woesei Alpha-Amylase
pdb|1MXD|A Chain A, Structure Of A (Ca,Zn)-Dependent Alpha-Amylase From The
Hyperthermophilic Archaeon Pyrococcus Woesei
pdb|1MXG|A Chain A, Crystal Strucutre Of A (Ca,Zn)-Dependent Alpha-Amylase
From The Hyperthermophilic Archaeon Pyrococcus Woesei In
Complex With Acarbose
Length = 435
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM 203
S + L ++ +TA GI VIAD V NH A G + P
Sbjct: 85 SKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPF 122
>pdb|3IKM|A Chain A, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
pdb|3IKM|D Chain D, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
Length = 1172
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 200 YVPMGVFGSIVP-VITLGSISKRWIVPGW 227
Y G++G+I+P V+T G+I++R + P W
Sbjct: 764 YDEEGLYGAILPQVVTAGTITRRAVEPTW 792
>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
pdb|2EH6|B Chain B, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
Length = 375
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 137 DLDGVEALADENTVAIVI-INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189
D+D V L DE T I+I + G N S L K+ + +++I DEV
Sbjct: 161 DIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEV 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,830,104
Number of Sequences: 62578
Number of extensions: 503267
Number of successful extensions: 1295
Number of sequences better than 100.0: 106
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 110
length of query: 387
length of database: 14,973,337
effective HSP length: 101
effective length of query: 286
effective length of database: 8,652,959
effective search space: 2474746274
effective search space used: 2474746274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)