Query 038416
Match_columns 387
No_of_seqs 125 out of 1896
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 10:49:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038416.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038416hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 1.1E-61 2.5E-66 414.1 39.9 378 7-386 60-437 (447)
2 COG0436 Aspartate/tyrosine/aro 100.0 1.6E-57 3.4E-62 417.8 39.9 357 8-383 28-392 (393)
3 PLN00145 tyrosine/nicotianamin 100.0 3.9E-56 8.4E-61 416.8 42.4 378 7-386 51-428 (430)
4 PLN02187 rooty/superroot1 100.0 3.1E-55 6.6E-60 413.3 41.7 375 7-386 65-442 (462)
5 PLN02656 tyrosine transaminase 100.0 2.4E-54 5.2E-59 403.8 42.8 378 8-387 31-408 (409)
6 PLN00143 tyrosine/nicotianamin 100.0 4.9E-54 1.1E-58 401.5 42.7 378 7-386 31-408 (409)
7 PTZ00433 tyrosine aminotransfe 100.0 9.8E-52 2.1E-56 386.9 41.5 374 7-385 32-411 (412)
8 TIGR01265 tyr_nico_aTase tyros 100.0 4.5E-51 9.7E-56 381.6 41.3 372 8-383 31-402 (403)
9 TIGR01264 tyr_amTase_E tyrosin 100.0 4.7E-51 1E-55 381.6 41.1 369 9-383 32-400 (401)
10 PRK06207 aspartate aminotransf 100.0 5.6E-51 1.2E-55 380.4 40.6 354 11-384 42-404 (405)
11 PRK07366 succinyldiaminopimela 100.0 1.9E-50 4.2E-55 376.1 37.6 351 10-380 32-388 (388)
12 PLN00175 aminotransferase fami 100.0 4.3E-50 9.2E-55 374.8 39.7 350 9-381 55-412 (413)
13 PRK13355 bifunctional HTH-doma 100.0 3E-50 6.5E-55 386.0 39.5 370 4-384 143-516 (517)
14 PRK07681 aspartate aminotransf 100.0 5.2E-50 1.1E-54 374.1 39.4 348 8-378 32-384 (399)
15 PRK06855 aminotransferase; Val 100.0 7.9E-50 1.7E-54 375.2 40.2 366 10-383 34-430 (433)
16 COG1168 MalY Bifunctional PLP- 100.0 1.2E-49 2.6E-54 343.2 36.2 356 6-383 23-387 (388)
17 PRK08636 aspartate aminotransf 100.0 3.2E-49 7E-54 369.1 40.3 358 8-384 33-402 (403)
18 PRK08960 hypothetical protein; 100.0 2.6E-49 5.7E-54 368.2 39.3 350 9-381 33-386 (387)
19 PRK06107 aspartate aminotransf 100.0 3.2E-49 6.9E-54 369.0 39.9 359 9-384 34-402 (402)
20 PRK06348 aspartate aminotransf 100.0 3.4E-49 7.3E-54 366.8 39.3 349 9-379 30-382 (384)
21 PRK08068 transaminase; Reviewe 100.0 3.5E-49 7.6E-54 367.6 39.2 349 9-379 33-386 (389)
22 PRK09276 LL-diaminopimelate am 100.0 4E-49 8.7E-54 367.1 38.7 347 10-378 33-384 (385)
23 TIGR03540 DapC_direct LL-diami 100.0 8.1E-49 1.8E-53 364.7 39.3 348 9-378 30-382 (383)
24 PTZ00377 alanine aminotransfer 100.0 6.4E-49 1.4E-53 373.9 38.6 352 27-386 90-479 (481)
25 PRK07682 hypothetical protein; 100.0 6E-49 1.3E-53 365.0 37.4 352 9-383 21-377 (378)
26 PRK09148 aminotransferase; Val 100.0 1.7E-48 3.8E-53 363.9 40.4 357 9-384 31-392 (405)
27 PRK05942 aspartate aminotransf 100.0 1.2E-48 2.5E-53 364.5 38.8 352 5-379 33-389 (394)
28 PRK09147 succinyldiaminopimela 100.0 1.1E-48 2.3E-53 365.2 38.6 345 9-381 30-395 (396)
29 PRK07337 aminotransferase; Val 100.0 1.4E-48 3E-53 363.6 38.9 355 7-380 29-387 (388)
30 PRK07324 transaminase; Validat 100.0 1.6E-48 3.4E-53 360.2 35.8 345 8-383 26-371 (373)
31 PRK06108 aspartate aminotransf 100.0 6.5E-48 1.4E-52 359.1 39.2 352 8-381 24-381 (382)
32 PRK08361 aspartate aminotransf 100.0 3.4E-48 7.3E-53 361.2 37.0 353 9-382 34-390 (391)
33 PRK06290 aspartate aminotransf 100.0 1.1E-47 2.4E-52 357.6 39.5 354 9-384 45-407 (410)
34 PRK05957 aspartate aminotransf 100.0 1.7E-47 3.7E-52 355.8 40.7 353 10-384 29-387 (389)
35 PRK05764 aspartate aminotransf 100.0 1.1E-47 2.4E-52 358.6 39.5 359 8-383 31-392 (393)
36 PRK09265 aminotransferase AlaT 100.0 3.6E-47 7.8E-52 355.6 40.8 368 8-384 33-403 (404)
37 PRK07683 aminotransferase A; V 100.0 4.1E-47 9E-52 353.0 40.1 353 8-384 28-385 (387)
38 PRK12414 putative aminotransfe 100.0 2.2E-47 4.9E-52 354.4 38.0 347 9-378 30-383 (384)
39 KOG0257 Kynurenine aminotransf 100.0 1.5E-48 3.2E-53 339.8 28.1 349 13-377 36-414 (420)
40 PRK08912 hypothetical protein; 100.0 2.9E-47 6.2E-52 354.7 38.8 353 9-382 27-386 (387)
41 PRK08363 alanine aminotransfer 100.0 3.5E-47 7.5E-52 355.2 39.1 360 8-383 30-395 (398)
42 TIGR03538 DapC_gpp succinyldia 100.0 2.6E-47 5.7E-52 355.4 37.4 343 9-379 29-392 (393)
43 PLN02231 alanine transaminase 100.0 3.8E-47 8.2E-52 361.7 39.0 354 23-386 140-531 (534)
44 PRK07309 aromatic amino acid a 100.0 7.6E-47 1.6E-51 351.7 39.9 353 9-384 31-390 (391)
45 PRK07590 L,L-diaminopimelate a 100.0 2.7E-47 5.7E-52 356.8 36.9 344 8-379 34-408 (409)
46 PRK09082 methionine aminotrans 100.0 3.3E-47 7.1E-52 353.8 35.7 349 8-378 30-385 (386)
47 PRK07550 hypothetical protein; 100.0 1E-46 2.2E-51 350.8 38.5 349 10-379 31-384 (386)
48 PRK07777 aminotransferase; Val 100.0 1.6E-46 3.4E-51 349.7 38.8 353 8-381 24-385 (387)
49 TIGR03537 DapC succinyldiamino 100.0 1.8E-46 4E-51 344.4 37.9 339 12-378 4-349 (350)
50 PRK07568 aspartate aminotransf 100.0 3.8E-46 8.2E-51 348.8 40.3 352 10-385 32-395 (397)
51 PLN02450 1-aminocyclopropane-1 100.0 1.3E-46 2.8E-51 355.2 36.6 329 44-384 80-432 (468)
52 PRK05839 hypothetical protein; 100.0 2.2E-46 4.9E-51 346.3 37.2 340 5-381 21-373 (374)
53 COG1167 ARO8 Transcriptional r 100.0 5.6E-46 1.2E-50 349.0 38.1 356 8-385 89-458 (459)
54 PLN02376 1-aminocyclopropane-1 100.0 3.9E-46 8.5E-51 353.0 36.7 329 44-384 88-440 (496)
55 PLN02607 1-aminocyclopropane-1 100.0 5.1E-46 1.1E-50 348.5 35.7 351 25-386 59-441 (447)
56 PRK08175 aminotransferase; Val 100.0 1.3E-45 2.8E-50 344.1 38.1 353 9-383 30-390 (395)
57 PRK15481 transcriptional regul 100.0 5.4E-45 1.2E-49 343.6 36.0 335 10-380 87-429 (431)
58 PRK09275 aspartate aminotransf 100.0 9.8E-45 2.1E-49 340.2 35.9 359 9-385 101-520 (527)
59 TIGR03542 DAPAT_plant LL-diami 100.0 1.4E-44 2.9E-49 337.8 36.4 341 9-379 34-401 (402)
60 PRK06836 aspartate aminotransf 100.0 3E-44 6.5E-49 334.6 38.4 353 6-384 31-393 (394)
61 PF00155 Aminotran_1_2: Aminot 100.0 2.7E-45 5.8E-50 339.5 26.4 348 10-376 3-363 (363)
62 PRK09257 aromatic amino acid a 100.0 1.3E-44 2.8E-49 337.5 30.9 347 9-380 27-396 (396)
63 PRK01533 histidinol-phosphate 100.0 1.7E-44 3.7E-49 331.7 30.3 331 8-386 29-359 (366)
64 PRK06225 aspartate aminotransf 100.0 2.9E-43 6.3E-48 327.0 38.6 337 23-385 39-379 (380)
65 PRK14809 histidinol-phosphate 100.0 7.6E-44 1.7E-48 328.1 33.2 326 9-381 31-356 (357)
66 PRK07865 N-succinyldiaminopime 100.0 1.9E-43 4.2E-48 326.3 35.9 329 8-377 27-363 (364)
67 PRK02610 histidinol-phosphate 100.0 2.1E-43 4.5E-48 326.7 34.7 336 10-384 30-373 (374)
68 PRK03158 histidinol-phosphate 100.0 9E-44 2E-48 328.2 30.7 329 9-379 30-358 (359)
69 TIGR03801 asp_4_decarbox aspar 100.0 4.6E-43 9.9E-48 328.5 35.5 359 10-385 96-519 (521)
70 PTZ00376 aspartate aminotransf 100.0 2.3E-43 5E-48 329.5 32.6 344 9-381 30-402 (404)
71 PLN02672 methionine S-methyltr 100.0 4.8E-43 1E-47 347.4 36.5 352 9-381 698-1079(1082)
72 PLN02368 alanine transaminase 100.0 9.3E-44 2E-48 329.0 28.8 289 26-322 82-397 (407)
73 PRK06358 threonine-phosphate d 100.0 1.2E-42 2.6E-47 319.1 35.1 330 10-379 21-352 (354)
74 TIGR03539 DapC_actino succinyl 100.0 1.9E-42 4.1E-47 318.5 36.1 327 9-376 22-356 (357)
75 PRK09440 avtA valine--pyruvate 100.0 5.8E-42 1.3E-46 322.1 36.6 355 8-386 30-415 (416)
76 PRK07392 threonine-phosphate d 100.0 4.3E-42 9.4E-47 316.6 33.9 325 11-376 25-356 (360)
77 PRK05166 histidinol-phosphate 100.0 3.3E-42 7.2E-47 318.5 32.7 329 9-376 37-368 (371)
78 PRK08056 threonine-phosphate d 100.0 5.7E-42 1.2E-46 315.2 34.0 330 10-380 22-353 (356)
79 PRK08153 histidinol-phosphate 100.0 8.1E-42 1.8E-46 315.3 34.4 338 5-385 29-368 (369)
80 PRK03317 histidinol-phosphate 100.0 1.1E-41 2.3E-46 315.1 33.4 333 11-382 29-364 (368)
81 PRK08637 hypothetical protein; 100.0 3.3E-41 7.2E-46 313.5 36.1 357 7-384 2-388 (388)
82 PLN03026 histidinol-phosphate 100.0 1.6E-41 3.4E-46 314.2 33.4 325 9-378 53-378 (380)
83 COG0079 HisC Histidinol-phosph 100.0 2E-41 4.3E-46 305.8 33.0 320 24-382 34-354 (356)
84 PRK02731 histidinol-phosphate 100.0 2.7E-41 5.9E-46 312.7 33.7 332 10-381 34-365 (367)
85 PRK04870 histidinol-phosphate 100.0 1.9E-41 4.1E-46 312.2 32.0 324 10-379 28-355 (356)
86 KOG0256 1-aminocyclopropane-1- 100.0 3.1E-41 6.8E-46 291.5 30.2 330 44-384 115-463 (471)
87 PLN02397 aspartate transaminas 100.0 4.4E-41 9.6E-46 314.8 33.6 341 9-381 49-420 (423)
88 PRK05387 histidinol-phosphate 100.0 5.6E-41 1.2E-45 309.1 32.1 326 9-381 25-352 (353)
89 PRK14807 histidinol-phosphate 100.0 1.6E-40 3.4E-45 305.1 34.8 315 23-379 33-349 (351)
90 PRK09105 putative aminotransfe 100.0 8.8E-41 1.9E-45 307.9 33.1 313 23-380 54-368 (370)
91 PRK04781 histidinol-phosphate 100.0 1.5E-40 3.2E-45 306.1 31.5 303 43-378 53-359 (364)
92 TIGR01141 hisC histidinol-phos 100.0 1.6E-40 3.4E-45 305.3 30.0 328 6-376 17-345 (346)
93 PRK01688 histidinol-phosphate 100.0 6.4E-41 1.4E-45 307.3 27.2 298 43-376 51-350 (351)
94 PRK07908 hypothetical protein; 100.0 4.9E-39 1.1E-43 295.2 34.7 322 9-381 23-346 (349)
95 PRK03321 putative aminotransfe 100.0 2E-39 4.3E-44 298.5 31.0 328 9-381 23-350 (352)
96 PRK06425 histidinol-phosphate 100.0 5.7E-39 1.2E-43 292.3 31.1 295 43-380 34-331 (332)
97 PRK00950 histidinol-phosphate 100.0 1.3E-38 2.8E-43 294.3 31.5 323 9-380 35-360 (361)
98 PRK04635 histidinol-phosphate 100.0 5.1E-39 1.1E-43 295.4 28.2 297 43-378 54-351 (354)
99 PRK14808 histidinol-phosphate 100.0 7E-38 1.5E-42 285.0 31.7 314 8-377 19-332 (335)
100 PRK03967 histidinol-phosphate 100.0 9.5E-38 2.1E-42 284.7 31.9 306 23-382 29-334 (337)
101 PRK05664 threonine-phosphate d 100.0 1.7E-37 3.8E-42 282.1 33.3 283 45-382 46-328 (330)
102 PRK06959 putative threonine-ph 100.0 2.3E-37 4.9E-42 281.8 32.4 287 44-385 49-336 (339)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.2E-37 2.5E-42 283.5 29.2 286 43-376 41-329 (330)
104 PRK08354 putative aminotransfe 100.0 2.1E-36 4.6E-41 272.9 34.0 300 8-376 8-309 (311)
105 KOG0634 Aromatic amino acid am 100.0 1.1E-36 2.3E-41 265.7 30.1 329 44-386 94-470 (472)
106 cd00609 AAT_like Aspartate ami 100.0 1.9E-35 4.1E-40 272.4 38.9 345 12-377 2-349 (350)
107 COG3977 Alanine-alpha-ketoisov 100.0 9.6E-34 2.1E-38 235.6 28.9 344 10-385 32-414 (417)
108 KOG0258 Alanine aminotransfera 100.0 2E-33 4.2E-38 241.6 28.6 346 27-383 88-470 (475)
109 PRK13238 tnaA tryptophanase/L- 100.0 3.8E-32 8.3E-37 254.7 32.0 341 9-381 37-432 (460)
110 PRK10874 cysteine sulfinate de 100.0 2.6E-31 5.6E-36 248.8 32.6 321 25-383 30-399 (401)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.9E-31 6.3E-36 241.0 31.9 310 20-380 28-345 (346)
112 TIGR03392 FeS_syn_CsdA cystein 100.0 6.2E-31 1.3E-35 246.0 33.2 321 25-383 27-396 (398)
113 PLN02822 serine palmitoyltrans 100.0 1.3E-30 2.8E-35 246.6 29.9 337 22-385 120-480 (481)
114 PRK09295 bifunctional cysteine 100.0 1.3E-29 2.8E-34 237.5 32.9 320 25-381 34-403 (406)
115 TIGR01979 sufS cysteine desulf 100.0 2.2E-29 4.8E-34 236.1 33.5 321 25-383 29-402 (403)
116 cd06451 AGAT_like Alanine-glyo 100.0 1.5E-29 3.2E-34 233.5 31.5 320 24-381 8-356 (356)
117 PLN02855 Bifunctional selenocy 100.0 4.3E-29 9.2E-34 235.2 33.9 325 25-385 43-421 (424)
118 TIGR01822 2am3keto_CoA 2-amino 100.0 1.1E-28 2.4E-33 230.7 34.3 328 9-383 39-390 (393)
119 TIGR00858 bioF 8-amino-7-oxono 100.0 5.6E-29 1.2E-33 230.2 31.8 327 5-377 14-360 (360)
120 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.5E-28 3.2E-33 227.1 32.8 323 24-383 18-369 (370)
121 PRK10534 L-threonine aldolase; 100.0 4.8E-29 1E-33 227.8 27.7 310 20-381 6-332 (333)
122 PRK06939 2-amino-3-ketobutyrat 100.0 2.5E-28 5.5E-33 228.8 32.8 334 9-383 43-394 (397)
123 PRK02627 acetylornithine amino 100.0 1.7E-28 3.6E-33 229.7 31.5 335 9-383 40-395 (396)
124 PRK13392 5-aminolevulinate syn 100.0 1.8E-28 3.9E-33 229.9 31.1 323 20-383 55-398 (410)
125 PRK01278 argD acetylornithine 100.0 2.9E-28 6.2E-33 227.1 31.7 335 9-383 32-389 (389)
126 PRK05958 8-amino-7-oxononanoat 100.0 4.4E-28 9.5E-33 226.3 33.1 332 8-380 39-385 (385)
127 TIGR01825 gly_Cac_T_rel pyrido 100.0 5E-28 1.1E-32 225.7 33.3 332 9-383 34-382 (385)
128 COG0520 csdA Selenocysteine ly 100.0 7.9E-28 1.7E-32 221.0 32.8 320 25-381 33-404 (405)
129 cd00378 SHMT Serine-glycine hy 100.0 5.1E-28 1.1E-32 226.8 32.1 340 9-384 20-387 (402)
130 PLN02483 serine palmitoyltrans 100.0 4.6E-28 9.9E-33 229.7 31.6 321 25-384 119-468 (489)
131 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.1E-27 2.5E-32 221.0 32.9 323 23-380 10-360 (361)
132 cd06502 TA_like Low-specificit 100.0 2.6E-28 5.7E-33 223.7 28.5 317 19-378 3-337 (338)
133 PLN02721 threonine aldolase 100.0 7.7E-28 1.7E-32 222.0 31.7 319 25-382 17-352 (353)
134 cd00617 Tnase_like Tryptophana 100.0 4.6E-28 1E-32 224.0 30.1 325 28-382 32-408 (431)
135 TIGR03402 FeS_nifS cysteine de 100.0 7.5E-28 1.6E-32 223.8 31.7 325 25-385 10-375 (379)
136 PLN02409 serine--glyoxylate am 100.0 7.9E-28 1.7E-32 224.2 31.8 326 25-384 19-374 (401)
137 COG1104 NifS Cysteine sulfinat 100.0 2.4E-28 5.2E-33 215.9 25.7 332 24-385 11-380 (386)
138 PRK02948 cysteine desulfurase; 100.0 3.2E-28 6.9E-33 226.5 27.5 326 25-384 11-376 (381)
139 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.7E-28 1.5E-32 225.7 29.6 315 25-376 28-397 (397)
140 cd06453 SufS_like Cysteine des 100.0 9E-28 2E-32 223.0 29.8 315 25-376 10-373 (373)
141 TIGR00707 argD acetylornithine 100.0 1.2E-27 2.7E-32 222.6 30.1 331 9-379 28-378 (379)
142 PRK07049 methionine gamma-lyas 100.0 2.9E-27 6.3E-32 220.5 31.9 231 44-310 78-320 (427)
143 TIGR03403 nifS_epsilon cystein 100.0 3.6E-27 7.9E-32 219.4 32.3 331 25-385 10-378 (382)
144 PRK07179 hypothetical protein; 100.0 7.2E-27 1.6E-31 218.9 33.6 320 20-383 63-399 (407)
145 cd06454 KBL_like KBL_like; thi 100.0 6.5E-27 1.4E-31 215.5 32.4 316 23-379 13-348 (349)
146 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1E-26 2.2E-31 216.1 33.4 326 23-383 29-382 (387)
147 TIGR01821 5aminolev_synth 5-am 100.0 5.8E-27 1.3E-31 219.3 32.1 323 20-383 54-397 (402)
148 PRK03244 argD acetylornithine 100.0 2.9E-27 6.3E-32 221.2 29.3 331 9-384 44-396 (398)
149 TIGR01977 am_tr_V_EF2568 cyste 100.0 5E-27 1.1E-31 218.3 30.7 328 23-378 9-375 (376)
150 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 7.7E-27 1.7E-31 215.5 31.2 317 24-379 8-354 (355)
151 TIGR02326 transamin_PhnW 2-ami 100.0 9.5E-27 2.1E-31 215.2 30.9 315 25-380 13-360 (363)
152 PRK06234 methionine gamma-lyas 100.0 7.2E-27 1.6E-31 216.9 29.6 317 17-382 25-397 (400)
153 PRK09064 5-aminolevulinate syn 100.0 1.8E-26 3.8E-31 216.5 32.3 322 21-383 56-398 (407)
154 KOG0633 Histidinol phosphate a 100.0 1.6E-27 3.4E-32 194.9 21.7 288 70-379 83-374 (375)
155 COG1448 TyrB Aspartate/tyrosin 100.0 8.1E-27 1.8E-31 202.2 26.1 344 7-379 25-395 (396)
156 PRK13479 2-aminoethylphosphona 100.0 6.2E-26 1.3E-30 210.2 31.8 323 24-383 14-364 (368)
157 PRK13520 L-tyrosine decarboxyl 100.0 9.8E-26 2.1E-30 209.3 32.4 325 24-381 30-370 (371)
158 PRK02936 argD acetylornithine 100.0 9.4E-26 2E-30 209.5 31.3 333 9-380 30-377 (377)
159 TIGR02006 IscS cysteine desulf 100.0 1E-25 2.3E-30 210.6 31.1 328 25-384 14-379 (402)
160 PRK13393 5-aminolevulinate syn 100.0 1.8E-25 3.9E-30 209.3 32.5 323 20-383 54-397 (406)
161 cd00613 GDC-P Glycine cleavage 100.0 1.3E-25 2.8E-30 210.5 30.0 326 11-376 23-398 (398)
162 PRK06767 methionine gamma-lyas 100.0 1.7E-25 3.7E-30 207.1 30.2 293 43-382 55-385 (386)
163 PRK04073 rocD ornithine--oxo-a 100.0 1.7E-25 3.8E-30 208.6 28.8 316 26-380 57-395 (396)
164 PRK08247 cystathionine gamma-s 100.0 3.3E-25 7.2E-30 203.8 30.1 284 50-382 52-364 (366)
165 cd06450 DOPA_deC_like DOPA dec 99.9 4.4E-26 9.6E-31 209.5 24.3 310 26-378 11-344 (345)
166 cd00610 OAT_like Acetyl ornith 99.9 9E-26 1.9E-30 212.6 26.8 328 26-380 53-413 (413)
167 PRK09028 cystathionine beta-ly 99.9 9.8E-25 2.1E-29 200.1 32.3 251 19-310 30-286 (394)
168 PLN02242 methionine gamma-lyas 99.9 2.7E-25 5.9E-30 206.5 28.8 218 49-305 75-300 (418)
169 PRK05093 argD bifunctional N-s 99.9 5.4E-25 1.2E-29 205.7 30.7 333 9-383 41-401 (403)
170 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.1E-24 2.3E-29 202.5 32.6 318 25-378 31-372 (373)
171 PRK07504 O-succinylhomoserine 99.9 9E-25 2E-29 202.6 31.6 292 45-384 61-397 (398)
172 PRK08133 O-succinylhomoserine 99.9 6.5E-25 1.4E-29 203.1 30.6 220 50-310 61-286 (390)
173 PRK14012 cysteine desulfurase; 99.9 8.1E-25 1.8E-29 204.9 31.5 328 25-384 14-381 (404)
174 PRK08249 cystathionine gamma-s 99.9 8.7E-25 1.9E-29 202.3 31.2 289 49-385 63-396 (398)
175 PRK08861 cystathionine gamma-s 99.9 1.6E-24 3.4E-29 199.1 31.4 291 50-385 53-386 (388)
176 TIGR02080 O_succ_thio_ly O-suc 99.9 7.3E-25 1.6E-29 201.9 29.4 294 43-382 45-381 (382)
177 COG0075 Serine-pyruvate aminot 99.9 1E-24 2.2E-29 194.6 28.8 331 24-384 14-365 (383)
178 PF12897 Aminotran_MocR: Alani 99.9 6.2E-25 1.3E-29 190.9 26.6 310 43-380 61-413 (425)
179 PRK08045 cystathionine gamma-s 99.9 1.9E-24 4.2E-29 199.2 31.6 296 43-384 46-384 (386)
180 TIGR01437 selA_rel uncharacter 99.9 6.1E-25 1.3E-29 201.7 28.3 331 3-380 3-363 (363)
181 cd00614 CGS_like CGS_like: Cys 99.9 1.7E-24 3.6E-29 199.7 30.7 282 49-380 39-368 (369)
182 PRK08776 cystathionine gamma-s 99.9 3.2E-24 6.9E-29 198.8 32.2 220 51-310 61-286 (405)
183 PRK06460 hypothetical protein; 99.9 2.1E-24 4.5E-29 198.8 30.4 287 49-383 44-375 (376)
184 PRK07503 methionine gamma-lyas 99.9 3.3E-24 7.1E-29 199.1 31.5 220 50-310 65-292 (403)
185 PRK07810 O-succinylhomoserine 99.9 2.8E-24 6E-29 199.2 30.7 226 43-310 64-296 (403)
186 PLN03227 serine palmitoyltrans 99.9 4E-24 8.7E-29 198.2 31.2 332 20-384 7-384 (392)
187 PLN02651 cysteine desulfurase 99.9 2.3E-24 5E-29 199.1 29.5 316 25-370 10-364 (364)
188 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.9E-24 8.5E-29 197.6 30.7 224 45-310 50-279 (380)
189 TIGR01328 met_gam_lyase methio 99.9 3.9E-24 8.4E-29 197.9 30.4 285 50-382 59-390 (391)
190 PRK12381 bifunctional succinyl 99.9 3.4E-24 7.3E-29 200.2 30.1 340 9-385 40-402 (406)
191 PF00266 Aminotran_5: Aminotra 99.9 4.8E-24 1E-28 197.7 30.9 311 25-372 10-371 (371)
192 PRK00011 glyA serine hydroxyme 99.9 7.6E-24 1.6E-28 199.3 32.4 325 25-382 36-389 (416)
193 TIGR00713 hemL glutamate-1-sem 99.9 2.9E-24 6.3E-29 202.2 28.3 345 8-383 48-423 (423)
194 TIGR03235 DNA_S_dndA cysteine 99.9 8.6E-25 1.9E-29 201.4 24.0 316 25-372 9-348 (353)
195 PRK07582 cystathionine gamma-l 99.9 7.2E-24 1.6E-28 194.7 29.4 286 43-382 45-365 (366)
196 PRK07811 cystathionine gamma-s 99.9 1.1E-23 2.5E-28 194.7 30.5 288 49-381 60-387 (388)
197 PRK08088 4-aminobutyrate amino 99.9 7.4E-24 1.6E-28 199.0 29.6 350 9-382 42-423 (425)
198 PRK00451 glycine dehydrogenase 99.9 6.7E-24 1.4E-28 201.3 29.1 319 22-380 78-446 (447)
199 PRK00854 rocD ornithine--oxo-a 99.9 7.4E-24 1.6E-28 198.4 28.2 313 26-381 58-400 (401)
200 PRK08574 cystathionine gamma-s 99.9 2.5E-23 5.3E-28 192.0 31.0 223 49-310 52-278 (385)
201 COG0156 BioF 7-keto-8-aminopel 99.9 2.8E-23 6E-28 187.3 30.3 318 20-379 48-387 (388)
202 PRK08248 O-acetylhomoserine am 99.9 4.9E-23 1.1E-27 192.0 32.7 296 49-384 63-429 (431)
203 PRK07050 cystathionine beta-ly 99.9 1.2E-23 2.6E-28 194.6 28.1 295 43-383 59-392 (394)
204 PRK05968 hypothetical protein; 99.9 3.2E-23 7E-28 191.8 30.0 285 50-384 63-388 (389)
205 PRK04260 acetylornithine amino 99.9 5.3E-23 1.1E-27 190.7 31.4 318 23-379 42-374 (375)
206 KOG1549 Cysteine desulfurase N 99.9 1.2E-23 2.7E-28 186.7 25.1 336 24-385 53-421 (428)
207 PTZ00125 ornithine aminotransf 99.9 3.1E-23 6.7E-28 194.3 29.2 326 26-385 48-398 (400)
208 PRK06702 O-acetylhomoserine am 99.9 5.4E-23 1.2E-27 190.2 30.0 294 50-382 61-424 (432)
209 PRK04366 glycine dehydrogenase 99.9 1.2E-22 2.7E-27 192.8 32.5 337 22-385 78-451 (481)
210 PRK07269 cystathionine gamma-s 99.9 2.2E-23 4.7E-28 190.7 25.6 286 50-381 54-363 (364)
211 TIGR03246 arg_catab_astC succi 99.9 8.1E-23 1.7E-27 190.4 29.8 340 9-383 36-396 (397)
212 COG4992 ArgD Ornithine/acetylo 99.9 6.3E-23 1.4E-27 181.3 26.8 341 9-385 43-401 (404)
213 TIGR01329 cysta_beta_ly_E cyst 99.9 7.2E-23 1.6E-27 188.7 28.6 290 45-383 40-376 (378)
214 PLN00144 acetylornithine trans 99.9 9.7E-23 2.1E-27 188.3 29.5 323 26-383 32-381 (382)
215 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2E-22 4.3E-27 188.3 30.8 159 50-236 57-219 (418)
216 PRK06084 O-acetylhomoserine am 99.9 2.4E-22 5.2E-27 187.3 31.0 297 50-384 58-424 (425)
217 TIGR01324 cysta_beta_ly_B cyst 99.9 1.7E-22 3.6E-27 185.6 29.1 291 45-382 43-376 (377)
218 PRK08064 cystathionine beta-ly 99.9 3.6E-22 7.7E-27 184.9 30.9 283 50-384 54-384 (390)
219 PRK05967 cystathionine beta-ly 99.9 6.3E-22 1.4E-26 181.3 30.7 283 54-383 68-392 (395)
220 PRK05939 hypothetical protein; 99.9 7.5E-22 1.6E-26 182.5 31.4 288 51-382 48-396 (397)
221 TIGR00700 GABAtrnsam 4-aminobu 99.9 4.6E-22 9.9E-27 186.5 30.1 349 9-381 34-419 (420)
222 PRK07505 hypothetical protein; 99.9 1.5E-21 3.2E-26 182.7 32.5 316 23-382 58-399 (402)
223 PRK06918 4-aminobutyrate amino 99.9 1.5E-21 3.3E-26 184.3 32.7 354 9-384 55-445 (451)
224 PRK09792 4-aminobutyrate trans 99.9 1.6E-21 3.5E-26 182.4 32.5 348 9-381 41-420 (421)
225 PRK05937 8-amino-7-oxononanoat 99.9 1.3E-21 2.8E-26 181.0 31.2 317 20-385 13-353 (370)
226 PLN02955 8-amino-7-oxononanoat 99.9 4.3E-21 9.3E-26 177.1 33.5 315 20-382 111-461 (476)
227 PRK08134 O-acetylhomoserine am 99.9 2.1E-21 4.6E-26 181.0 31.4 296 50-385 64-430 (433)
228 TIGR01814 kynureninase kynuren 99.9 1.8E-21 4E-26 182.3 30.3 319 25-380 38-405 (406)
229 PRK07812 O-acetylhomoserine am 99.9 3.7E-21 7.9E-26 179.2 31.6 298 50-386 69-435 (436)
230 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.9E-21 6.3E-26 178.1 30.3 301 32-377 3-352 (352)
231 PRK07671 cystathionine beta-ly 99.9 3.1E-21 6.7E-26 177.7 30.0 220 50-310 50-275 (377)
232 PRK05994 O-acetylhomoserine am 99.9 2.7E-21 5.8E-26 180.7 29.7 228 50-310 63-321 (427)
233 PRK04612 argD acetylornithine 99.9 5.4E-21 1.2E-25 177.7 31.4 343 8-385 40-406 (408)
234 COG2008 GLY1 Threonine aldolas 99.9 2.7E-21 5.9E-26 167.6 26.9 323 20-380 6-341 (342)
235 PLN02509 cystathionine beta-ly 99.9 3.8E-21 8.2E-26 179.5 29.9 228 44-310 125-358 (464)
236 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.4E-20 3E-25 173.3 33.2 310 26-380 9-375 (376)
237 PRK06176 cystathionine gamma-s 99.9 4.3E-21 9.3E-26 176.8 29.8 284 50-382 50-378 (380)
238 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7.2E-21 1.6E-25 176.1 31.4 316 26-380 12-377 (379)
239 PRK08114 cystathionine beta-ly 99.9 7E-21 1.5E-25 174.2 30.4 288 49-382 61-393 (395)
240 PLN02624 ornithine-delta-amino 99.9 5.4E-21 1.2E-25 181.1 30.1 326 26-384 92-446 (474)
241 PRK06777 4-aminobutyrate amino 99.9 8.1E-21 1.7E-25 177.7 29.8 329 26-381 57-420 (421)
242 TIGR01885 Orn_aminotrans ornit 99.9 7.4E-21 1.6E-25 177.9 29.0 315 26-380 54-400 (401)
243 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 1.1E-20 2.4E-25 172.6 28.9 291 44-381 47-386 (386)
244 PRK00062 glutamate-1-semialdeh 99.9 5.1E-21 1.1E-25 179.6 27.0 343 9-383 51-425 (426)
245 PRK13034 serine hydroxymethylt 99.9 4.6E-20 1E-24 172.3 32.4 324 25-382 39-392 (416)
246 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.3E-20 1.4E-24 169.8 32.9 313 26-380 9-374 (375)
247 KOG1368 Threonine aldolase [Am 99.9 7.6E-21 1.6E-25 158.8 23.7 325 17-380 25-366 (384)
248 PRK08360 4-aminobutyrate amino 99.9 6.2E-20 1.3E-24 172.2 32.7 332 26-385 58-429 (443)
249 PRK08117 4-aminobutyrate amino 99.9 4.9E-20 1.1E-24 173.6 30.5 335 26-386 60-433 (433)
250 TIGR01788 Glu-decarb-GAD gluta 99.9 4.3E-20 9.3E-25 171.6 29.2 340 24-383 51-430 (431)
251 PRK07495 4-aminobutyrate amino 99.9 6.8E-20 1.5E-24 171.2 30.5 348 9-385 41-424 (425)
252 PRK06058 4-aminobutyrate amino 99.9 1.1E-19 2.4E-24 171.2 31.8 332 26-383 73-443 (443)
253 PRK13580 serine hydroxymethylt 99.9 9.4E-20 2E-24 168.5 30.4 333 25-383 60-446 (493)
254 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.7E-19 3.8E-24 167.5 32.6 317 26-380 8-380 (380)
255 TIGR01364 serC_1 phosphoserine 99.9 6.3E-20 1.4E-24 167.1 28.9 325 25-382 2-348 (349)
256 COG0160 GabT 4-aminobutyrate a 99.9 1.1E-19 2.3E-24 165.8 29.2 336 26-383 73-446 (447)
257 PRK05613 O-acetylhomoserine am 99.9 2.3E-19 5E-24 167.2 32.1 229 50-310 69-331 (437)
258 PRK05964 adenosylmethionine--8 99.9 5.6E-20 1.2E-24 172.7 28.1 346 9-383 43-423 (423)
259 TIGR02407 ectoine_ectB diamino 99.9 1.8E-19 4E-24 168.1 31.0 331 26-382 52-412 (412)
260 PRK09264 diaminobutyrate--2-ox 99.9 2.7E-19 5.8E-24 167.8 31.6 347 9-385 40-419 (425)
261 cd00611 PSAT_like Phosphoserin 99.9 3.7E-20 8.1E-25 169.9 25.0 320 24-379 8-353 (355)
262 PRK03715 argD acetylornithine 99.9 4.8E-19 1E-23 164.2 32.2 337 8-383 36-394 (395)
263 COG0626 MetC Cystathionine bet 99.9 4.9E-19 1.1E-23 159.5 30.5 286 49-383 62-395 (396)
264 PTZ00094 serine hydroxymethylt 99.9 3.2E-19 7E-24 168.7 30.4 329 25-383 45-409 (452)
265 PRK05355 3-phosphoserine/phosp 99.9 2.4E-19 5.1E-24 164.2 28.4 323 24-382 12-358 (360)
266 KOG1412 Aspartate aminotransfe 99.9 1.9E-19 4.1E-24 151.3 24.7 351 9-385 31-408 (410)
267 PRK03080 phosphoserine aminotr 99.9 1.6E-19 3.6E-24 167.0 26.5 316 25-385 22-376 (378)
268 COG2873 MET17 O-acetylhomoseri 99.9 2.9E-19 6.4E-24 154.3 25.7 297 49-382 61-425 (426)
269 PLN02724 Molybdenum cofactor s 99.9 3.8E-19 8.2E-24 178.6 30.7 302 51-380 79-486 (805)
270 COG0001 HemL Glutamate-1-semia 99.9 8.6E-19 1.9E-23 156.9 29.0 341 7-385 52-431 (432)
271 COG0399 WecE Predicted pyridox 99.9 2.6E-18 5.6E-23 154.0 31.9 318 26-382 13-373 (374)
272 cd00615 Orn_deC_like Ornithine 99.9 3.1E-20 6.7E-25 166.2 19.7 225 51-299 60-293 (294)
273 PRK15407 lipopolysaccharide bi 99.9 4.3E-18 9.4E-23 159.4 33.6 295 52-381 65-435 (438)
274 PRK02769 histidine decarboxyla 99.9 5.9E-18 1.3E-22 155.3 32.8 289 52-382 63-372 (380)
275 PF01041 DegT_DnrJ_EryC1: DegT 99.8 8.7E-19 1.9E-23 161.5 26.9 307 27-377 4-363 (363)
276 PLN02590 probable tyrosine dec 99.8 2.2E-18 4.7E-23 163.2 30.0 351 25-385 141-535 (539)
277 KOG2862 Alanine-glyoxylate ami 99.8 3.7E-18 7.9E-23 143.8 27.3 324 30-383 28-383 (385)
278 PLN02880 tyrosine decarboxylas 99.8 3.3E-18 7.1E-23 162.0 30.1 328 43-386 111-488 (490)
279 KOG0053 Cystathionine beta-lya 99.8 2.3E-18 5E-23 153.1 27.2 218 50-305 77-298 (409)
280 TIGR02618 tyr_phenol_ly tyrosi 99.8 6.9E-18 1.5E-22 153.9 30.5 339 6-382 36-426 (450)
281 PRK06434 cystathionine gamma-l 99.8 4.8E-18 1E-22 155.7 29.7 281 49-381 63-383 (384)
282 PLN02271 serine hydroxymethylt 99.8 8.1E-18 1.8E-22 156.2 30.8 337 25-381 159-539 (586)
283 PRK08593 4-aminobutyrate amino 99.8 1.2E-17 2.7E-22 157.0 32.3 347 9-385 43-432 (445)
284 PLN03226 serine hydroxymethylt 99.8 1.4E-17 3E-22 157.0 30.9 336 25-382 45-419 (475)
285 TIGR00709 dat 2,4-diaminobutyr 99.8 2.8E-17 6E-22 154.8 33.0 335 26-384 56-437 (442)
286 PF04864 Alliinase_C: Allinase 99.8 2.4E-19 5.2E-24 154.2 16.8 290 50-379 43-362 (363)
287 PLN02760 4-aminobutyrate:pyruv 99.8 2.1E-17 4.7E-22 156.8 31.6 350 9-384 90-493 (504)
288 PRK06541 hypothetical protein; 99.8 1.8E-17 3.8E-22 156.3 30.6 336 26-384 69-457 (460)
289 PRK11522 putrescine--2-oxoglut 99.8 2.6E-17 5.6E-22 154.8 31.4 328 26-385 99-454 (459)
290 TIGR03531 selenium_SpcS O-phos 99.8 1.1E-17 2.4E-22 154.7 28.1 284 74-379 124-443 (444)
291 PRK05769 4-aminobutyrate amino 99.8 6.6E-17 1.4E-21 151.9 33.3 346 9-383 55-440 (441)
292 TIGR03372 putres_am_tran putre 99.8 1.7E-17 3.7E-22 154.9 28.2 325 26-380 92-442 (442)
293 PRK13360 omega amino acid--pyr 99.8 7E-17 1.5E-21 151.6 31.7 331 26-383 63-441 (442)
294 PLN02414 glycine dehydrogenase 99.8 2.8E-17 6.1E-22 164.4 30.6 305 54-385 572-910 (993)
295 TIGR01366 serC_3 phosphoserine 99.8 1.2E-17 2.5E-22 153.4 25.7 313 25-383 13-361 (361)
296 KOG1360 5-aminolevulinate synt 99.8 3E-17 6.5E-22 142.6 25.6 324 21-383 181-525 (570)
297 PRK07678 aminotransferase; Val 99.8 1E-16 2.2E-21 151.1 31.5 336 26-383 64-450 (451)
298 PRK04013 argD acetylornithine/ 99.8 2.6E-17 5.6E-22 150.2 26.4 307 26-384 41-362 (364)
299 KOG1411 Aspartate aminotransfe 99.8 2E-18 4.3E-23 147.2 17.5 346 8-381 52-424 (427)
300 PRK07482 hypothetical protein; 99.8 9.3E-17 2E-21 151.6 30.9 352 8-384 50-456 (461)
301 PRK07046 aminotransferase; Val 99.8 5.6E-17 1.2E-21 152.4 29.2 342 8-384 75-452 (453)
302 PRK05965 hypothetical protein; 99.8 4.8E-17 1E-21 153.5 28.7 347 9-384 47-449 (459)
303 PRK06943 adenosylmethionine--8 99.8 1.1E-16 2.4E-21 150.6 30.7 330 26-384 71-448 (453)
304 COG0161 BioA Adenosylmethionin 99.8 4.3E-17 9.3E-22 147.9 26.4 331 26-385 61-446 (449)
305 PF00464 SHMT: Serine hydroxym 99.8 3E-17 6.4E-22 148.7 24.9 332 25-375 31-398 (399)
306 PRK06105 aminotransferase; Pro 99.8 1.7E-16 3.8E-21 149.8 31.3 348 8-384 48-451 (460)
307 PRK09221 beta alanine--pyruvat 99.8 1.6E-16 3.5E-21 149.3 30.4 331 26-383 66-444 (445)
308 PRK07986 adenosylmethionine--8 99.8 9.4E-17 2E-21 149.9 28.5 322 26-382 60-423 (428)
309 PRK06082 4-aminobutyrate amino 99.8 1.9E-16 4.2E-21 149.3 30.9 345 9-385 73-454 (459)
310 PRK06173 adenosylmethionine--8 99.8 1.5E-16 3.2E-21 148.7 29.6 326 26-385 61-428 (429)
311 PRK05630 adenosylmethionine--8 99.8 1.3E-16 2.7E-21 149.0 28.9 321 26-382 57-420 (422)
312 PRK06062 hypothetical protein; 99.8 1.6E-16 3.5E-21 149.6 29.8 330 26-384 70-447 (451)
313 PLN03032 serine decarboxylase; 99.8 3.8E-16 8.3E-21 142.3 31.2 310 29-378 38-372 (374)
314 COG0112 GlyA Glycine/serine hy 99.8 3.5E-16 7.7E-21 136.8 29.4 329 25-382 37-390 (413)
315 PRK12403 putative aminotransfe 99.8 2.6E-16 5.6E-21 148.6 31.0 349 9-384 55-454 (460)
316 PRK08742 adenosylmethionine--8 99.8 2.3E-16 5.1E-21 148.7 30.3 350 9-383 65-468 (472)
317 COG0076 GadB Glutamate decarbo 99.8 2.8E-17 6.1E-22 153.1 23.3 281 25-321 73-380 (460)
318 PRK05639 4-aminobutyrate amino 99.8 3E-16 6.5E-21 147.7 30.5 332 26-384 70-445 (457)
319 COG1103 Archaea-specific pyrid 99.8 5.9E-17 1.3E-21 134.0 22.3 324 25-383 28-381 (382)
320 PRK13237 tyrosine phenol-lyase 99.8 1E-15 2.2E-20 140.3 31.9 307 45-382 73-433 (460)
321 PLN02452 phosphoserine transam 99.8 2.1E-16 4.6E-21 144.0 27.3 334 10-382 8-363 (365)
322 cd01494 AAT_I Aspartate aminot 99.8 9.9E-18 2.1E-22 137.7 16.8 165 53-234 3-169 (170)
323 PLN02482 glutamate-1-semialdeh 99.8 3.4E-16 7.4E-21 147.4 28.9 341 8-382 99-473 (474)
324 PRK00615 glutamate-1-semialdeh 99.8 4E-16 8.6E-21 145.7 28.2 346 9-384 54-430 (433)
325 PRK07030 adenosylmethionine--8 99.8 3.3E-16 7.2E-21 147.8 27.6 329 26-383 64-447 (466)
326 PRK07036 hypothetical protein; 99.8 8.6E-16 1.9E-20 145.1 30.3 331 26-384 68-454 (466)
327 PRK12389 glutamate-1-semialdeh 99.8 5.4E-16 1.2E-20 145.6 28.8 323 26-382 70-427 (428)
328 PRK06917 hypothetical protein; 99.8 1.6E-15 3.5E-20 142.7 31.6 352 8-386 31-441 (447)
329 PRK06916 adenosylmethionine--8 99.8 6.5E-16 1.4E-20 145.9 28.7 330 26-384 73-457 (460)
330 PRK04311 selenocysteine syntha 99.8 1.2E-15 2.7E-20 142.7 29.9 321 25-381 97-463 (464)
331 PRK07480 putative aminotransfe 99.8 6.4E-16 1.4E-20 145.6 28.2 334 26-384 67-450 (456)
332 PRK07481 hypothetical protein; 99.8 3.7E-15 8E-20 140.5 32.8 334 26-383 59-446 (449)
333 PRK06149 hypothetical protein; 99.8 2E-15 4.3E-20 154.6 32.7 344 8-382 585-970 (972)
334 PRK06938 diaminobutyrate--2-ox 99.8 2.5E-15 5.4E-20 141.8 30.3 353 9-384 64-462 (464)
335 TIGR01365 serC_2 phosphoserine 99.8 7.5E-16 1.6E-20 140.3 25.7 312 30-379 19-370 (374)
336 TIGR00508 bioA adenosylmethion 99.8 1.5E-15 3.3E-20 142.2 28.3 323 26-382 62-426 (427)
337 PRK07483 hypothetical protein; 99.8 1.9E-15 4.1E-20 142.0 28.9 339 26-385 47-440 (443)
338 PRK06148 hypothetical protein; 99.7 4.5E-15 9.8E-20 152.1 32.5 335 24-383 636-1011(1013)
339 KOG1402 Ornithine aminotransfe 99.7 8.4E-16 1.8E-20 130.6 22.4 321 26-381 76-426 (427)
340 PLN02263 serine decarboxylase 99.7 2E-14 4.4E-19 132.9 32.5 298 51-383 130-444 (470)
341 PRK12462 phosphoserine aminotr 99.7 5.3E-15 1.2E-19 133.3 26.9 333 10-382 5-362 (364)
342 TIGR00474 selA seryl-tRNA(sec) 99.7 8.4E-15 1.8E-19 136.8 28.6 316 25-376 92-453 (454)
343 KOG1359 Glycine C-acetyltransf 99.7 1.4E-15 3.1E-20 127.2 20.1 319 21-384 77-414 (417)
344 KOG1401 Acetylornithine aminot 99.7 5.3E-15 1.1E-19 129.7 24.4 345 8-383 56-431 (433)
345 PRK06931 diaminobutyrate--2-ox 99.7 2.3E-14 5E-19 135.3 30.8 352 9-385 59-457 (459)
346 PRK08297 L-lysine aminotransfe 99.7 1.1E-14 2.3E-19 137.0 28.5 328 26-383 62-442 (443)
347 TIGR03799 NOD_PanD_pyr putativ 99.7 1.4E-14 3.1E-19 137.6 28.8 268 34-320 110-437 (522)
348 KOG1404 Alanine-glyoxylate ami 99.7 1.7E-14 3.7E-19 125.7 25.7 322 26-376 67-432 (442)
349 TIGR03251 LAT_fam L-lysine 6-t 99.7 3.7E-14 8E-19 133.2 28.8 341 8-378 38-430 (431)
350 PRK15029 arginine decarboxylas 99.7 3.7E-14 8.1E-19 138.5 28.7 229 52-301 207-464 (755)
351 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.5E-15 3.2E-20 138.3 16.5 234 52-307 68-326 (417)
352 PRK06209 glutamate-1-semialdeh 99.7 4.5E-14 9.6E-19 132.7 25.6 335 9-384 49-407 (431)
353 PLN02974 adenosylmethionine-8- 99.7 1.1E-13 2.3E-18 137.3 29.2 331 26-380 383-816 (817)
354 PF01212 Beta_elim_lyase: Beta 99.7 2.7E-17 5.9E-22 144.8 3.4 191 26-235 7-207 (290)
355 TIGR00699 GABAtrns_euk 4-amino 99.7 5.5E-14 1.2E-18 131.7 24.3 341 8-380 58-464 (464)
356 PF00282 Pyridoxal_deC: Pyrido 99.6 6.2E-14 1.3E-18 128.6 23.7 282 25-316 50-369 (373)
357 PRK05367 glycine dehydrogenase 99.6 5.7E-13 1.2E-17 134.4 32.5 307 51-385 539-878 (954)
358 KOG1383 Glutamate decarboxylas 99.6 2.6E-13 5.5E-18 121.1 25.3 315 49-385 115-449 (491)
359 TIGR00461 gcvP glycine dehydro 99.6 6E-13 1.3E-17 132.1 30.6 313 50-385 526-870 (939)
360 PRK12566 glycine dehydrogenase 99.6 6.2E-13 1.3E-17 131.2 29.3 305 49-384 538-878 (954)
361 PRK13578 ornithine decarboxyla 99.6 3.7E-13 8.1E-18 130.2 25.5 166 52-234 176-367 (720)
362 KOG1357 Serine palmitoyltransf 99.6 9.7E-14 2.1E-18 123.0 16.6 319 23-383 153-503 (519)
363 PRK15400 lysine decarboxylase 99.6 2.3E-12 5.1E-17 124.7 26.5 164 52-233 197-378 (714)
364 TIGR02617 tnaA_trp_ase tryptop 99.6 5.7E-12 1.2E-16 114.4 26.4 333 19-382 47-441 (467)
365 PRK15399 lysine decarboxylase 99.5 1.5E-11 3.3E-16 119.1 30.0 163 52-234 197-379 (713)
366 KOG1358 Serine palmitoyltransf 99.5 7.9E-13 1.7E-17 115.3 18.4 330 20-383 103-466 (467)
367 PLN02414 glycine dehydrogenase 99.5 1.3E-11 2.9E-16 124.1 28.2 308 24-377 115-464 (993)
368 PRK05367 glycine dehydrogenase 99.5 1.8E-11 3.8E-16 123.8 28.6 270 53-377 124-437 (954)
369 PF00202 Aminotran_3: Aminotra 99.5 1E-12 2.3E-17 119.6 17.6 234 26-277 33-295 (339)
370 TIGR03811 tyr_de_CO2_Ent tyros 99.5 1.9E-10 4.2E-15 110.6 29.2 276 25-320 94-501 (608)
371 COG3844 Kynureninase [Amino ac 99.4 1E-10 2.3E-15 100.0 23.4 287 70-385 90-405 (407)
372 KOG2467 Glycine/serine hydroxy 99.4 1.9E-10 4.2E-15 99.7 25.1 336 26-381 52-425 (477)
373 COG1982 LdcC Arginine/lysine/o 99.4 2.2E-10 4.7E-15 106.9 26.7 233 52-307 72-318 (557)
374 KOG1403 Predicted alanine-glyo 99.3 3E-10 6.4E-15 96.0 19.1 332 26-381 62-436 (452)
375 COG1921 SelA Selenocysteine sy 99.3 7.7E-10 1.7E-14 98.8 19.8 249 25-301 38-299 (395)
376 PF06838 Met_gamma_lyase: Meth 99.2 3.5E-09 7.6E-14 92.8 21.1 177 56-254 56-249 (403)
377 PLN02994 1-aminocyclopropane-1 99.2 1.6E-10 3.5E-15 91.5 9.6 82 22-109 70-153 (153)
378 KOG0628 Aromatic-L-amino-acid/ 99.2 3.3E-08 7.1E-13 88.8 24.6 322 49-385 108-474 (511)
379 TIGR00461 gcvP glycine dehydro 99.1 6.9E-08 1.5E-12 96.7 28.3 309 24-377 76-426 (939)
380 COG1003 GcvP Glycine cleavage 99.1 1.1E-07 2.3E-12 85.0 23.7 315 50-385 105-450 (496)
381 PF02347 GDC-P: Glycine cleava 99.1 1.2E-07 2.6E-12 87.0 23.9 282 54-376 114-429 (429)
382 COG3033 TnaA Tryptophanase [Am 99.1 1.4E-07 3E-12 82.2 22.5 313 45-383 74-445 (471)
383 PF03841 SelA: L-seryl-tRNA se 99.0 5.9E-10 1.3E-14 98.7 6.8 251 25-301 17-296 (367)
384 COG1932 SerC Phosphoserine ami 99.0 4.5E-07 9.8E-12 79.7 22.6 317 25-383 15-364 (365)
385 PF05889 SLA_LP_auto_ag: Solub 98.9 1.6E-07 3.4E-12 84.2 18.0 288 74-381 75-389 (389)
386 KOG0629 Glutamate decarboxylas 98.9 1E-07 2.2E-12 84.8 16.4 320 43-381 130-508 (510)
387 KOG1405 4-aminobutyrate aminot 98.9 1.5E-06 3.2E-11 75.7 21.7 213 139-382 256-483 (484)
388 COG4100 Cystathionine beta-lya 98.8 2.6E-07 5.7E-12 78.5 14.7 172 50-236 65-250 (416)
389 COG0403 GcvP Glycine cleavage 98.8 4.8E-05 1E-09 68.5 28.5 287 56-379 126-447 (450)
390 PRK12566 glycine dehydrogenase 98.4 0.00023 5.1E-09 71.6 25.2 269 71-377 139-439 (954)
391 KOG3846 L-kynurenine hydrolase 97.9 0.0074 1.6E-07 52.3 21.3 305 50-385 111-464 (465)
392 KOG2790 Phosphoserine aminotra 97.8 0.0032 7E-08 53.8 16.6 330 8-383 6-369 (370)
393 KOG3843 Predicted serine hydro 97.4 0.0013 2.8E-08 55.6 9.0 157 86-254 89-251 (432)
394 KOG2040 Glycine dehydrogenase 97.2 0.21 4.5E-06 48.1 23.7 310 50-382 578-918 (1001)
395 PLN02672 methionine S-methyltr 95.8 0.45 9.7E-06 49.8 16.0 193 31-235 407-615 (1082)
396 KOG2040 Glycine dehydrogenase 94.8 4.4 9.4E-05 39.6 19.9 265 74-377 181-478 (1001)
397 PRK10595 SOS cell division inh 89.5 5.3 0.00011 32.0 9.5 85 93-184 52-137 (164)
398 TIGR00623 sula cell division i 88.3 6.5 0.00014 31.5 9.2 84 94-184 57-141 (168)
399 COG1105 FruK Fructose-1-phosph 83.3 13 0.00028 33.3 9.6 58 133-193 108-171 (310)
400 COG0552 FtsY Signal recognitio 77.0 11 0.00023 34.1 7.0 105 81-191 151-270 (340)
401 COG2102 Predicted ATPases of P 74.3 35 0.00077 28.8 8.9 98 75-184 3-115 (223)
402 PF05368 NmrA: NmrA-like famil 73.0 24 0.00053 30.0 8.3 91 82-186 8-99 (233)
403 PRK05678 succinyl-CoA syntheta 72.7 16 0.00034 32.6 7.1 49 137-191 78-126 (291)
404 PRK04296 thymidine kinase; Pro 72.5 29 0.00063 28.7 8.3 95 83-192 17-117 (190)
405 TIGR03573 WbuX N-acetyl sugar 72.5 41 0.00089 30.9 10.0 109 73-197 60-176 (343)
406 KOG1465 Translation initiation 71.1 64 0.0014 28.7 10.0 108 73-190 162-273 (353)
407 COG1184 GCD2 Translation initi 67.7 72 0.0016 28.5 9.9 103 72-186 118-226 (301)
408 KOG1201 Hydroxysteroid 17-beta 65.9 32 0.00068 30.6 7.3 141 71-226 36-182 (300)
409 cd06568 GH20_SpHex_like A subg 65.6 12 0.00025 34.2 4.9 65 118-186 29-93 (329)
410 COG1435 Tdk Thymidine kinase [ 65.5 47 0.001 27.6 7.8 107 80-202 15-129 (201)
411 TIGR01019 sucCoAalpha succinyl 65.4 26 0.00057 31.1 6.9 50 137-192 76-125 (286)
412 cd02742 GH20_hexosaminidase Be 64.8 12 0.00026 33.6 4.9 64 118-186 27-90 (303)
413 KOG1467 Translation initiation 61.7 67 0.0015 30.5 8.8 127 49-187 324-467 (556)
414 COG0296 GlgB 1,4-alpha-glucan 61.0 11 0.00023 37.4 3.9 33 166-198 212-244 (628)
415 PRK08535 translation initiatio 60.6 92 0.002 28.1 9.6 105 72-187 119-228 (310)
416 PRK06372 translation initiatio 60.6 1.2E+02 0.0025 26.5 9.8 100 74-186 87-190 (253)
417 PRK08335 translation initiatio 60.5 1.1E+02 0.0025 27.0 9.8 104 72-186 108-216 (275)
418 TIGR00511 ribulose_e2b2 ribose 60.1 97 0.0021 27.8 9.6 104 73-187 115-223 (301)
419 cd06570 GH20_chitobiase-like_1 59.9 15 0.00033 33.1 4.5 58 118-186 29-86 (311)
420 COG0352 ThiE Thiamine monophos 59.4 49 0.0011 27.9 7.1 52 138-191 24-75 (211)
421 cd06562 GH20_HexA_HexB-like Be 58.3 14 0.00031 33.9 4.1 60 118-186 29-88 (348)
422 TIGR03815 CpaE_hom_Actino heli 57.0 1.5E+02 0.0033 26.8 12.4 56 135-191 160-215 (322)
423 COG0074 SucD Succinyl-CoA synt 56.9 54 0.0012 28.9 7.0 83 97-191 44-126 (293)
424 KOG2741 Dimeric dihydrodiol de 56.7 29 0.00064 31.4 5.6 76 104-192 58-133 (351)
425 TIGR00524 eIF-2B_rel eIF-2B al 56.5 1.5E+02 0.0032 26.7 10.2 103 73-187 118-237 (303)
426 PF14258 DUF4350: Domain of un 54.5 49 0.0011 22.0 5.3 61 109-187 9-70 (70)
427 PF04392 ABC_sub_bind: ABC tra 53.9 71 0.0015 28.4 7.9 140 26-185 12-164 (294)
428 PRK11889 flhF flagellar biosyn 51.8 2.2E+02 0.0047 27.0 11.6 95 83-191 255-363 (436)
429 COG0505 CarA Carbamoylphosphat 51.6 42 0.00092 30.5 5.7 69 97-179 179-249 (368)
430 PF04002 RadC: RadC-like JAB d 51.3 31 0.00067 26.2 4.4 49 136-185 51-104 (123)
431 PRK08265 short chain dehydroge 50.7 1.4E+02 0.0031 25.7 9.2 54 74-129 7-60 (261)
432 COG1066 Sms Predicted ATP-depe 50.6 90 0.002 29.3 7.7 112 68-186 87-215 (456)
433 TIGR00262 trpA tryptophan synt 50.2 1.7E+02 0.0038 25.5 14.6 26 138-163 153-178 (256)
434 PF13460 NAD_binding_10: NADH( 50.0 1.3E+02 0.0027 24.2 8.3 90 76-182 1-90 (183)
435 COG2870 RfaE ADP-heptose synth 47.9 77 0.0017 29.5 6.8 105 80-192 73-182 (467)
436 KOG2865 NADH:ubiquinone oxidor 47.0 1.4E+02 0.0031 26.5 8.0 87 89-182 77-169 (391)
437 PF00265 TK: Thymidine kinase; 46.7 42 0.00091 27.4 4.7 110 80-204 12-124 (176)
438 PF03652 UPF0081: Uncharacteri 46.4 43 0.00094 25.9 4.5 58 135-192 37-99 (135)
439 PTZ00187 succinyl-CoA syntheta 46.2 94 0.002 28.1 7.2 78 103-192 73-151 (317)
440 cd08071 MPN_DUF2466 Mov34/MPN/ 46.0 62 0.0013 24.1 5.2 49 136-185 46-99 (113)
441 smart00642 Aamy Alpha-amylase 45.6 26 0.00056 28.3 3.3 26 167-192 69-94 (166)
442 PF02603 Hpr_kinase_N: HPr Ser 45.5 37 0.00081 25.9 4.0 39 139-186 72-110 (127)
443 TIGR02717 AcCoA-syn-alpha acet 45.0 1.5E+02 0.0032 28.5 8.8 57 137-194 77-134 (447)
444 COG0541 Ffh Signal recognition 44.4 1.9E+02 0.0041 27.5 8.9 132 54-191 77-225 (451)
445 PLN00125 Succinyl-CoA ligase [ 43.9 64 0.0014 29.0 5.7 78 101-192 52-132 (300)
446 PF10087 DUF2325: Uncharacteri 43.7 1.2E+02 0.0026 21.7 7.5 69 108-187 13-81 (97)
447 CHL00200 trpA tryptophan synth 43.3 2.3E+02 0.005 24.9 14.4 95 85-186 107-207 (263)
448 PLN02460 indole-3-glycerol-pho 42.8 23 0.0005 32.1 2.8 79 99-186 157-235 (338)
449 TIGR00064 ftsY signal recognit 42.2 1.4E+02 0.0031 26.3 7.8 99 83-190 86-202 (272)
450 TIGR00608 radc DNA repair prot 42.1 67 0.0015 27.3 5.4 46 139-185 150-199 (218)
451 cd06569 GH20_Sm-chitobiase-lik 41.7 45 0.00098 31.8 4.8 69 118-186 33-115 (445)
452 PF01008 IF-2B: Initiation fac 41.7 86 0.0019 27.7 6.4 105 71-187 105-216 (282)
453 TIGR02012 tigrfam_recA protein 41.1 1.1E+02 0.0025 27.7 7.0 22 334-355 269-290 (321)
454 COG4050 Uncharacterized protei 40.9 1E+02 0.0022 23.0 5.3 45 331-386 106-150 (152)
455 PF06153 DUF970: Protein of un 40.6 66 0.0014 23.9 4.4 52 330-382 12-66 (109)
456 PF00218 IGPS: Indole-3-glycer 40.3 33 0.00072 29.9 3.3 50 132-187 115-164 (254)
457 PRK04210 phosphoenolpyruvate c 40.1 3.1E+02 0.0068 27.1 9.9 108 51-166 9-134 (601)
458 TIGR01305 GMP_reduct_1 guanosi 39.8 93 0.002 28.3 6.1 116 74-191 96-222 (343)
459 PRK00024 hypothetical protein; 39.3 71 0.0015 27.3 5.1 46 139-185 156-205 (224)
460 COG0134 TrpC Indole-3-glycerol 38.9 21 0.00044 31.0 1.8 79 99-187 84-162 (254)
461 PRK05703 flhF flagellar biosyn 38.3 3.6E+02 0.0078 25.7 11.2 50 139-191 288-343 (424)
462 PLN00191 enolase 38.2 1.6E+02 0.0035 28.3 7.8 99 81-188 296-395 (457)
463 PF00728 Glyco_hydro_20: Glyco 37.8 37 0.0008 31.1 3.5 63 118-186 29-91 (351)
464 PF04273 DUF442: Putative phos 37.4 52 0.0011 24.4 3.6 64 93-158 23-96 (110)
465 PF01408 GFO_IDH_MocA: Oxidore 37.2 1.1E+02 0.0024 22.5 5.6 69 106-186 50-118 (120)
466 cd00532 MGS-like MGS-like doma 36.8 1.7E+02 0.0037 21.6 9.3 95 84-189 12-107 (112)
467 PF02662 FlpD: Methyl-viologen 36.5 97 0.0021 23.6 5.0 48 135-182 39-91 (124)
468 PF00154 RecA: recA bacterial 36.2 97 0.0021 28.1 5.7 31 93-125 77-107 (322)
469 KOG4589 Cell division protein 35.9 2.6E+02 0.0055 23.3 7.5 29 149-179 136-165 (232)
470 PRK13957 indole-3-glycerol-pho 35.7 94 0.002 27.0 5.3 55 125-186 102-156 (247)
471 COG0826 Collagenase and relate 35.5 1.1E+02 0.0023 28.2 6.0 46 137-182 15-63 (347)
472 TIGR00290 MJ0570_dom MJ0570-re 35.4 2.8E+02 0.0061 23.6 8.4 97 76-184 4-114 (223)
473 cd01121 Sms Sms (bacterial rad 35.3 3.5E+02 0.0076 25.2 9.4 111 70-186 78-205 (372)
474 PRK11070 ssDNA exonuclease Rec 34.9 3.6E+02 0.0078 26.9 9.8 100 79-190 52-160 (575)
475 COG0373 HemA Glutamyl-tRNA red 34.7 4E+02 0.0087 25.2 11.7 96 73-189 178-274 (414)
476 PRK09354 recA recombinase A; P 34.5 1.8E+02 0.0039 26.8 7.2 30 94-125 85-114 (349)
477 PRK00278 trpC indole-3-glycero 34.3 1E+02 0.0022 27.0 5.5 57 125-188 111-167 (260)
478 PRK02261 methylaspartate mutas 34.3 1.8E+02 0.0038 22.6 6.3 57 111-180 24-81 (137)
479 TIGR03590 PseG pseudaminic aci 34.1 3.3E+02 0.0071 24.0 9.0 84 93-190 27-113 (279)
480 PF00128 Alpha-amylase: Alpha 33.8 34 0.00074 30.4 2.6 28 167-194 51-78 (316)
481 PRK05096 guanosine 5'-monophos 33.7 1.6E+02 0.0035 26.9 6.6 116 74-191 97-223 (346)
482 TIGR01470 cysG_Nterm siroheme 33.6 2.9E+02 0.0062 23.2 10.3 96 72-190 8-104 (205)
483 PLN03244 alpha-amylase; Provis 33.5 64 0.0014 33.0 4.5 36 160-195 433-468 (872)
484 PF01902 ATP_bind_4: ATP-bindi 33.4 1.8E+02 0.004 24.7 6.7 98 76-185 4-115 (218)
485 TIGR02313 HpaI-NOT-DapA 2,4-di 33.2 3.2E+02 0.0069 24.4 8.6 83 82-188 81-164 (294)
486 TIGR00959 ffh signal recogniti 33.1 1.3E+02 0.0028 28.6 6.3 43 146-189 180-223 (428)
487 cd04751 Commd3 COMM_Domain con 32.9 78 0.0017 22.8 3.8 27 359-385 66-92 (95)
488 PRK15452 putative protease; Pr 32.8 1.2E+02 0.0027 28.9 6.1 24 358-381 285-309 (443)
489 TIGR00789 flhB_rel flhB C-term 32.2 43 0.00093 23.4 2.2 23 170-192 29-51 (82)
490 COG0031 CysK Cysteine synthase 32.0 3.2E+02 0.0069 24.5 8.1 85 71-160 59-148 (300)
491 PRK06194 hypothetical protein; 31.9 3.4E+02 0.0073 23.7 8.7 67 74-145 7-74 (287)
492 TIGR02104 pulA_typeI pullulana 31.6 48 0.001 33.1 3.4 27 167-193 228-254 (605)
493 PF03460 NIR_SIR_ferr: Nitrite 31.5 35 0.00077 22.5 1.8 24 157-181 14-37 (69)
494 PRK13602 putative ribosomal pr 31.4 1.7E+02 0.0038 20.3 5.2 47 138-191 16-63 (82)
495 KOG3974 Predicted sugar kinase 31.4 1.5E+02 0.0033 25.8 5.7 67 118-191 75-142 (306)
496 cd00951 KDGDH 5-dehydro-4-deox 31.3 1.7E+02 0.0038 26.0 6.6 53 133-186 15-74 (289)
497 COG0816 Predicted endonuclease 31.3 1.9E+02 0.004 22.7 5.9 56 136-191 40-99 (141)
498 cd01422 MGS Methylglyoxal synt 31.3 2.2E+02 0.0048 21.2 9.1 63 119-186 44-106 (115)
499 PF04748 Polysacc_deac_2: Dive 31.3 2.4E+02 0.0051 23.9 7.0 120 51-185 72-206 (213)
500 cd06563 GH20_chitobiase-like T 31.1 55 0.0012 30.2 3.5 28 160-187 78-105 (357)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-61 Score=414.12 Aligned_cols=378 Identities=59% Similarity=1.046 Sum_probs=363.9
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
++.++.+..|+|+.++.+++++.+.+|+.++++.+..++|.+..|....|+++|+|+.++.....++++|++|+|.++|+
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred CceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 34678899999999999999999999999999998899999999999999999999999888889999999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
+.++.+|.+||.+|++|.|+|+-|...+. ..|++++++++.++.+|.+|++.+|+++++||++++++||+||+|.+++
T Consensus 140 e~~i~~LA~p~aNILlPrPGfp~Y~~~a~--~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys 217 (447)
T KOG0259|consen 140 ELAISSLANPGANILLPRPGFPLYDTRAI--YSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYS 217 (447)
T ss_pred HHHHHHhcCCCCceecCCCCCchHHHhhh--hcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCccccc
Confidence 99999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+.+++|++.|+++++++|.||+|..+.|++.++.++..+.....++.++++||.|..||||+||++..|+..++.++..
T Consensus 218 ~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~ 297 (447)
T KOG0259|consen 218 EDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV 297 (447)
T ss_pred HHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
.+.+.+..+....+.++.|.|+-.+|+...++++......++.+.+...+.|+++|++.+...|++.+|+|+.++...++
T Consensus 298 ~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~ 377 (447)
T KOG0259|consen 298 VQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFP 377 (447)
T ss_pred HHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhc
Confidence 89999988888999999999999999998899999999999999999999999999999888999999999999988888
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
++.++.+|++.|.++..+.+.||..|+.++|+|++++.+.+.+++++.||++++.++.+.
T Consensus 378 ~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 378 DIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHSKE 437 (447)
T ss_pred cccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhhhc
Confidence 888999999999999999999999999999999999999999999999999999988753
No 2
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-57 Score=417.85 Aligned_cols=357 Identities=27% Similarity=0.462 Sum_probs=321.3
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED-VYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~a~ 86 (387)
+..++.+.|+| |+++|+.+.+++.+++.+... +|.+..|.++||++|++++.++++..+.+++ |++|+|+++|+
T Consensus 28 ~~vi~l~iG~P----d~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEP----DFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCC----CCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 56889999999 999999999999999988643 6768899999999999999999998888876 99999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC-CCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE-KRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
..++.+++++||+|++++|.|..|...+. ..|.+++.+++..+ ++|.+|++.|+++++++||++++++||||||.++
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~--~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~ 180 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVK--LAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVY 180 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHH--hcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCC
Confidence 99999999999999999999999999999 99999999998655 4899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+.+++++|+++|++||++||.||+|..+.|++..+.++..+.. .++++++.||||.|+++|||+||+++++ +
T Consensus 181 ~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~ 253 (393)
T COG0436 181 SKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------E 253 (393)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------H
Confidence 9999999999999999999999999999999865555555554 4789999999999999999999999973 1
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
++++.+.+..+ ...+++.+.|.++..+|+... ....+.+.+.+++|++.+.+.|.+++++.+...|.+++|+|++++.
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~ 333 (393)
T COG0436 254 ELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE 333 (393)
T ss_pred HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCC
Confidence 68888875544 667899999999999999753 3567778899999999999999999889966448999999999986
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCCC---CeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGMK---NWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
. .++.+++..|+++.||.+.||..|+.. +++|++++.+.+.+++++++|.+.++.+
T Consensus 334 ~-----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 334 L-----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred C-----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 4 378899999999999999999999975 7999999998899999999999988765
No 3
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-56 Score=416.85 Aligned_cols=378 Identities=65% Similarity=1.146 Sum_probs=326.8
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+.+++++.|+|+..+++++++.+.+++.+++.....+.|++..|..++|+++++++.+.++..+++++|++|+|+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 34678888999999999999999999999998765556899888999999999999998888888999999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.++.++||+|+++.|+|+.|..... ..|.++..+++.++++|.+|+++++++++++++++++++|+||||.+++
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~ 208 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAV--FSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYS 208 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHH--HcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999998888 8999999999877778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|+++|+++|+++|+||+|..+.|++..+.++..+....++++++||||.|++||+|+||++++++..+....++
T Consensus 209 ~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~ 288 (430)
T PLN00145 209 YEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKV 288 (430)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHH
Confidence 99999999999999999999999999988776556666666667899999999999999999999998654332211123
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+.........++.+.|.++..+|....+.++++..+.++++++.+.+.|++++++.++..|++++|+|++++....+
T Consensus 289 ~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~ 368 (430)
T PLN00145 289 VDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS 368 (430)
T ss_pred HHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcC
Confidence 34444444444456788999999999864568899999999999999999999988887555799999999998753333
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+..++.+++..+++++||.+.||..|+..+|+||+++.+.+++++++++|++++.+++++
T Consensus 369 ~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 369 GIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 333566788889999999999999999899999999988999999999999999998865
No 4
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.1e-55 Score=413.26 Aligned_cols=375 Identities=51% Similarity=0.977 Sum_probs=319.7
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
++.+++++.|+|...|.+.+++.+.+++.+++.......|++..|..+||+++|+|+.+.++.++++++|++|+|+++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al 144 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGI 144 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHH
Confidence 45688889999977777999999999999998866556898888999999999999998888889999999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||+|+++.|+|+.|...+. ..|.++..+++.++++|.+|++.++++++++++++++++|+||||.+++
T Consensus 145 ~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~--~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 145 EIVFESLARPNANILLPRPGFPHYDARAA--YSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred HHHHHHhcCCCCEEEEeCCCCccHHHHHH--HcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccC
Confidence 99999999999999999999999998899 9999999999876678999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|+++|+++|++||+||+|.++.|++..+.++..+....++++++||||.|+++|+|+||++++++..+. +.
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~ 299 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF---ET 299 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHH---HH
Confidence 999999999999999999999999999887655556655655457999999999999999999999986432111 12
Q ss_pred HHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 247 VDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 247 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++.+..... ...+++.+.|.++..++++..+.++++..+.++++++.+.+.|++++++..+..|.+|+|+|++++..
T Consensus 300 ~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~ 379 (462)
T PLN02187 300 TKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELS 379 (462)
T ss_pred HHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChh
Confidence 334444332 23355789999999999754568899999999999999999999886554344788999999988643
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
..+++.++.+++..+++++||.+.||..|+..+++||+++.+++.+++++++|.++++++.++
T Consensus 380 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 380 LMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred hCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 222222456777888889999999999998889999999989999999999999999988765
No 5
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.4e-54 Score=403.82 Aligned_cols=378 Identities=65% Similarity=1.127 Sum_probs=322.2
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++.++|+|...+++++|+.+.+++.+++.......|++..|..++|+++++++...++..+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 110 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAID 110 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHH
Confidence 45678889999777779999999999999888765668988889999999999999988888889999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|++++|+|..+..... ..|.++..+++.+++++.+|++.++++++++++++++++|+||||.+++.
T Consensus 111 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~ 188 (409)
T PLN02656 111 VALSMLARPGANILLPRPGFPIYELCAA--FRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSY 188 (409)
T ss_pred HHHHHHhCCCCeEEEeCCCCCcHHHHHH--HcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCH
Confidence 9999999999999999999999988888 89999999998766678899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++++++|+|++|.++.+++....++..++...++++++||||.|+++|+|+||++++++..+..+++++
T Consensus 189 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~ 268 (409)
T PLN02656 189 QHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIV 268 (409)
T ss_pred HHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHH
Confidence 99999999999999999999999999887755555555555568999999999999999999999996533333234678
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+.......++.+.|.++..++++..+.++++..+.++++++.+.+.|+.++++..+..|.+|+|+|++++....++
T Consensus 269 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~ 348 (409)
T PLN02656 269 ERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLED 348 (409)
T ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCC
Confidence 88876654334578889999999998645678899999999999999999998865543447899999999986432222
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhcC
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKKQ 387 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~~ 387 (387)
..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|++++.++...|
T Consensus 349 ~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~~ 408 (409)
T PLN02656 349 ISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ 408 (409)
T ss_pred CCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 223456777777889999999999988899999999899999999999999998877544
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.9e-54 Score=401.46 Aligned_cols=378 Identities=64% Similarity=1.103 Sum_probs=314.0
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
...+++.+.|+|..+.++++|+.+.+++.+++.......|++..|..+||+++++|+.+.++.++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al 110 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAA 110 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHH
Confidence 44577888999844444999999999999998866556798888999999999999998888888999999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||.|+++.|+|+.+...+. ..|.++..+++.++++|.+|+++++++++++++.+++++||||||.+++
T Consensus 111 ~~~~~~l~~~gd~v~v~~P~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 111 EIIIKVLARPEANILLPRPGFPDVETYAI--FHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHcCCCCEEEEcCCCCcCHHHHHH--HcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999 9999999999866677889999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|+++|++++++||+||+|.++.+++....++..+...+++++++||||.|+++|+|+||++++++..+...-+.
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~ 268 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI 268 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence 99999999999999999999999999988765445555555556899999999999999999999998543211100012
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+.+.......++.+.|.++..+|.+..+.++++..+.++++++.+.+.|+++++..+...|++|+|+|++++....+
T Consensus 269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~ 348 (409)
T PLN00143 269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE 348 (409)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC
Confidence 33343333222335778999999988754467889999999999999999998875544344688999999999742111
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|+++++++.++
T Consensus 349 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 349 DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 222456777788888999999999998889999999988999999999999999888764
No 7
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=9.8e-52 Score=386.86 Aligned_cols=374 Identities=35% Similarity=0.647 Sum_probs=314.1
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcC------CCCCCCCCEEEcC
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDL------PYKLSPEDVYLTL 80 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~------~~~~~~~~i~~~~ 80 (387)
+..+++++.|.|...+++.+++.+.+++.+.+.......|++..|..+||+.+++|+++++ +..+++++|++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~ 111 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCS 111 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeC
Confidence 3456788899986666788999999999998876555689998899999999999998754 3567889999999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 81 GCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 81 g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
|+++++..++.+++++||+|+++.|+|..+...++ ..|.++..+++++++++++|+++++++++++++++++++||||
T Consensus 112 G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NP 189 (412)
T PTZ00433 112 GVSHAILMALTALCDEGDNILVPAPGFPHYETVCK--AYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNP 189 (412)
T ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHH--HcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCC
Confidence 99999999999999999999999999999999999 9999999999876667899999999998888999999999999
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++++++||||.|+++|+|+||+++.++...
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 99999999999999999999999999999999988765444555555444689999999999999999999997432111
Q ss_pred ccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEec
Q 038416 241 LQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 320 (387)
.+++++.+.+......+.+.+.|.++..++.+..+.++++..+.++++++.+.+.|+++.++. +..|++|+|+|+++
T Consensus 270 --~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l 346 (412)
T PTZ00433 270 --GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLMSRL 346 (412)
T ss_pred --HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEEEEe
Confidence 124666666654334567888999998888754568889999999999999999998865676 44889999999998
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+....++..++.+++..+++++||.+.||..|+..+++||+++..++++++++++|.++++.+++
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 347 DLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK 411 (412)
T ss_pred chhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 64211111245678888877789999999999888999999998889999999999999987764
No 8
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.5e-51 Score=381.58 Aligned_cols=372 Identities=53% Similarity=0.964 Sum_probs=315.0
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
..+++.+.|+|...|++++++.+.+++.+.+.......|++..|..++|+.++++++...+..+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~ 110 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIE 110 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHH
Confidence 45677889998777889999999999999887655568988889999999999999887777788899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.++.++||+|+++.|+|..+...+. ..|.++..+++.+.+++.+|++.+++++.++++++++++|+||||.+++.
T Consensus 111 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~ 188 (403)
T TIGR01265 111 ICIEALANPGANILVPRPGFPLYDTRAA--FSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSR 188 (403)
T ss_pred HHHHHhCCCCCEEEEeCCCchhHHHHHH--HcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCH
Confidence 9999999999999999999999998889 99999999988666677899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+|++|+++.+++....++..+....++++++||||.|+++|+|+||++++++...+ .++++
T Consensus 189 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~-~~~~~ 267 (403)
T TIGR01265 189 DHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIF-RDTVL 267 (403)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhh-HHHHH
Confidence 99999999999999999999999999887755556666666567999999999999999999999986432111 01134
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.........++.+.|.++..++.+..+.++.+..+.++++++.+.+.|+.++++. +..|.+|+|+|++++....++
T Consensus 268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~ 346 (403)
T TIGR01265 268 QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV-CPKPEGAMYLMVKLELELFPE 346 (403)
T ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCceeEEEEeccccccCC
Confidence 4444443334567889999999999765568889999999999999999999887776 447999999999987532211
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|+++++++
T Consensus 347 ~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 347 IKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 22466788887888899999999998889999999988899999999999998765
No 9
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.7e-51 Score=381.63 Aligned_cols=369 Identities=37% Similarity=0.730 Sum_probs=309.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.|.|....++++++.+.+++.+.+.......|.+..|..+||+++++++.+. +..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~ 110 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEADDVVLCSGCSHAIEM 110 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHH
Confidence 4578888888444568899999999999887655567988889999999999999864 446788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|..+...++ ..|.++..++++.++++++|++.++++++++++++++++|+||||.+++.+
T Consensus 111 ~~~~l~~~gd~v~i~~P~y~~~~~~~~--~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~ 188 (401)
T TIGR01264 111 CIAALANAGQNILVPRPGFPLYETLAE--SMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQ 188 (401)
T ss_pred HHHHhCCCCCEEEEeCCCChhHHHHHH--HcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHH
Confidence 999999999999999999999999999 999999999887666788999999998888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||.|+++|+|+||++++++.... .++++
T Consensus 189 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~ 266 (401)
T TIGR01264 189 HLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGIL--RDIRD 266 (401)
T ss_pred HHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhH--HHHHH
Confidence 9999999999999999999999999887655556666655556999999999999999999999987422110 12444
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+........+++.+.|.++..+|.+..+.++++..+.++++++.+.+.|++++++. +..|.+|+|+|++++....++.
T Consensus 267 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~ 345 (401)
T TIGR01264 267 GLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEF 345 (401)
T ss_pred HHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeeEEEEEecccccCCC
Confidence 444443323567888999999998764468899999999999999999999987776 4479999999999864222222
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++
T Consensus 346 ~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 346 KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 2456778888778899999999998789999999988899999999999998765
No 10
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-51 Score=380.38 Aligned_cols=354 Identities=20% Similarity=0.253 Sum_probs=299.3
Q ss_pred cCCCCCCCCCCCC-CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHH
Q 038416 11 HSPWPRRPLGVSL-LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEI 88 (387)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~ 88 (387)
++++.|.| + +++++.+.+++.+.+.......|++..|.++||+.|++++.+.++..+++ ++|++|+|+++++..
T Consensus 42 i~l~~g~~----~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 42 VDFSHGDV----DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred eecCCcCC----CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 45666666 3 46778899999888876545679988899999999999999988877888 899999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC---CCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL---PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
++.+++++||+|+++.|+|+.+...+. ..|.+++.++++ +++++++|+++|+++++++++++++++||||||.++
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~ 195 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVE--FFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVY 195 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHH--HcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCC
Confidence 999999999999999999999999999 999999998875 234688999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+.+++++|+++|+++|++||+||+|..+.+++..+.++..+. ..+++++++||||.|+++|+|+||+++++
T Consensus 196 s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~-------- 267 (405)
T PRK06207 196 SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP-------- 267 (405)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH--------
Confidence 999999999999999999999999999988775544444332 24689999999999999999999999875
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+..... ...+.+.+.|.++..++++ ...++.+..+.++++++.+.+.|+.++++. +..|.+|+|+|++++..
T Consensus 268 ~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~~ 345 (405)
T PRK06207 268 AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPRL 345 (405)
T ss_pred HHHHHHHHHHhHhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCccc
Confidence 78888877653 3445677889999888874 235677778888888999999998887777 44788999999998742
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
. .+..++...+++++||.+.||..|+. .+++||+++.+.+++++++++|++++++++
T Consensus 346 ~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 346 A----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred C----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 1 14567888777778999999998864 579999998889999999999999998765
No 11
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.9e-50 Score=376.08 Aligned_cols=351 Identities=18% Similarity=0.271 Sum_probs=291.8
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~ 88 (387)
.++.+.|.+ ++++++.+.+++.+.+.......|++..|..+||+++++|+.+.+|.+++++ +|++|+|+++++..
T Consensus 32 ~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~ 107 (388)
T PRK07366 32 LIDLSLGSS----DLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH 107 (388)
T ss_pred eEEeCCCCC----CCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHH
Confidence 466777766 7888999999999988654455798888999999999999998888888998 69999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+.+...++ ..|.+++.+++++++++.+|++++++.+.++++++++++||||||.+++.+
T Consensus 108 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~ 185 (388)
T PRK07366 108 LPLAVLNPGDFALLLDPGYPSHAGGVY--LAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLS 185 (388)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHH--hcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHH
Confidence 999999999999999999999999999 999999999997766788899999888877899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCC-CccccccCCC-ccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTP-YVPMGVFGSI-VPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~~~-~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
++++|+++|+++|++||+||+|.++.+++.. ..++..++.. .++++++||||.|+++|+|+||+++++ ++
T Consensus 186 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~l 257 (388)
T PRK07366 186 FFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA--------QL 257 (388)
T ss_pred HHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH--------HH
Confidence 9999999999999999999999999886643 3445454433 468999999999999999999999865 78
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+.+... ...+..+..+.++...+.. .+.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++....
T Consensus 258 i~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~~~~ 334 (388)
T PRK07366 258 IQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPEPWQ 334 (388)
T ss_pred HHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCcccC
Confidence 888877654 2223323233333344432 35788999999999999999999988 676 4478999999999874210
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
.++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 335 ---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 335 ---GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred ---CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 13566777787888999999998864 47999999888999999999998753
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.3e-50 Score=374.78 Aligned_cols=350 Identities=26% Similarity=0.433 Sum_probs=301.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
..++++.|.| ++++++.+.+++.+.+... ...|++..|.++||+++++++.++++..++++ +|++|+|+++++.
T Consensus 55 ~~i~l~~G~P----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~ 129 (413)
T PLN00175 55 GAINLGQGFP----NFDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIA 129 (413)
T ss_pred CeEecCCCCC----CCCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHH
Confidence 4677788887 7888999999999988763 45899989999999999999998888888887 7999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|++++|+|..+...++ ..|.+++.+++.++ ++.+|+++|+++++++++++++++|+||||.+++.
T Consensus 130 ~~~~~l~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~ 206 (413)
T PLN00175 130 ATILGLINPGDEVILFAPFYDSYEATLS--MAGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR 206 (413)
T ss_pred HHHHHhCCCCCEEEEeCCCchhHHHHHH--HcCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence 9999999999999999999999999999 99999999998654 37899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++++++|+||+|..+.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--------~l 277 (413)
T PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HL 277 (413)
T ss_pred HHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--------HH
Confidence 9999999999999999999999999888653 334444433 4689999999999999999999999975 78
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+++.+.|.++..+|+. .+.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus 278 ~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~~f~~~~~~~~~- 353 (413)
T PLN00175 278 TWGVRQAHSFLTFATATPMQWAAVAALRA-PESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSSGTYFVMVDHTPFG- 353 (413)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEeccccC-
Confidence 888877654 4567888999999999975 35778899999999999999999988 677 447889999999874311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC-----CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM-----KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
..++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|++.++
T Consensus 354 --~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 354 --FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 124568888888888999999998842 469999999899999999999998876
No 13
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3e-50 Score=386.04 Aligned_cols=370 Identities=25% Similarity=0.444 Sum_probs=301.6
Q ss_pred ccccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 4 RKGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 4 ~~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
.+|+ .++++..|+|..+ ++++|+.+.+++.+.+.. ..+|++..|..+||++|++++..+.+..+++++|++|+|++
T Consensus 143 ~~g~-~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~ 218 (517)
T PRK13355 143 AAGT-HILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVS 218 (517)
T ss_pred HcCC-CeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHH
Confidence 3443 4567778888433 588899999999988764 35799989999999999999987665568899999999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
+++..++.+++++||+|+++.|+|+.|...+. ..|.+++.++++++++|.+|+++++++++++++++++++||||||.
T Consensus 219 eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~--~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~ 296 (517)
T PRK13355 219 ELINLSMSALLDDGDEVLIPSPDYPLWTACVN--LAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGA 296 (517)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHH--HCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCc
Confidence 99999999999999999999999999999999 9999999999877778999999999999889999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
+++.+++++|+++|++|+++||+||+|..+.|++....++..+..+..+++++||||.|+++|+|+||++++.+..+.
T Consensus 297 v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~-- 374 (517)
T PRK13355 297 LYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIA-- 374 (517)
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhH--
Confidence 999999999999999999999999999999987765556655555445788899999999999999999975321100
Q ss_pred hhHHHHHHhhhhccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 244 SGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
.++++.+........+.+.++|.++..+|.... +.++.+. +++.++++.+.+.|+++|++. +..|.+++|+|++++
T Consensus 375 ~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g~~-~~~p~g~fy~~~~l~ 452 (517)
T PRK13355 375 KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPGIS-AVKPKAAFYIFPKID 452 (517)
T ss_pred HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcc-cCCCCeeeEEEeecC
Confidence 023444433333335677889999988886421 3444443 345566789999999988888 558999999999886
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
....+ ..++.+++..+++++||.+.||..|+ .+++|||+++.+++++++++++|++++++++
T Consensus 453 ~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 453 VKKFN-IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred cccCC-CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 42111 12456788888899999999999996 3689999998889999999999999998764
No 14
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-50 Score=374.12 Aligned_cols=348 Identities=21% Similarity=0.336 Sum_probs=299.2
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~ 86 (387)
+..++.+.|.| ++++++.+.+++.+.+.....++|+ ..|..+||++|++|+.+.++..+++ ++|++|+|+++++
T Consensus 32 ~~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 32 HKMIDLSIGNP----DMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred CCeEEeCCCCC----CCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 34567777766 6788999999999887654344565 3799999999999999888888888 8999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||.|+++.|+|+.+...+. ..|.+++.++++++++|.+|++++++++.++++++++++||||||.+++
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~--~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s 184 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQ--MAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAH 184 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHH--hcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCC
Confidence 99999999999999999999999999999 9999999999977777889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
.+++++|+++|+++|++||+||+|.++.+++....++..++. .+++++++||||.|+++|+|+||+++++ +
T Consensus 185 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~--------~ 256 (399)
T PRK07681 185 EDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNE--------E 256 (399)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCH--------H
Confidence 999999999999999999999999999887655555544443 3578999999999999999999999865 7
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++.+..... ...+++.+.|.++..++++. +.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 257 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~g~f~~~~l~~~- 332 (399)
T PRK07681 257 IVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTF-GWN-VDKPAGSMFVWAEIPKG- 332 (399)
T ss_pred HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeeEEEEECCCC-
Confidence 8888877653 45678888999999998753 4678888889999999999999988 677 44788999999998642
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.++.++...+++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 333 ----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 ----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred ----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 24667888888878999999988865 479999999888999999999987
No 15
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7.9e-50 Score=375.22 Aligned_cols=366 Identities=24% Similarity=0.389 Sum_probs=298.2
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
+++.+.|+|... ++++|+.+.+++.+.+......+|++..|..+||+++++|+.++++..+++++|++|+|+++++..+
T Consensus 34 ~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~ 112 (433)
T PRK06855 34 ITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKI 112 (433)
T ss_pred ccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHH
Confidence 455678887432 6899999999999988655556899989999999999999999888889999999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHh-hccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeCCCCCccccCC
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHA-AGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~~~~ 166 (387)
+. ++++||.|++++|+|+.+.... . ..|.+++.++++++++|.+|+++|+++++ ++++++++++||||||.++|
T Consensus 113 ~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~--~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s 189 (433)
T PRK06855 113 YG-LLRREARVIGPSPAYSTHSSAEAA--HAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYP 189 (433)
T ss_pred HH-hcCCCCeEEEeCCCCchHHHHHHH--hcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCC
Confidence 85 7899999999999999876542 3 45888888888766778899999999886 35788999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch--
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS-- 244 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~-- 244 (387)
.+++++|+++|+++|++||+||+|..+.|.+..+.++..+..+.++++++||||.|+++|+|+||++++++.. ++
T Consensus 190 ~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~---~~~~ 266 (433)
T PRK06855 190 KEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADK---DEVF 266 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCch---hhHH
Confidence 9999999999999999999999999998877555566555444467999999999999999999999853110 01
Q ss_pred -hHHHHHHhhhhccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 245 -GFVDSIKGCLNAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
.+++.+........+++.+.|.++..++.+.. +.++++..+.++++++.+.+.|++++++. +..|.+|+|+|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~ 345 (433)
T PRK06855 267 KKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeecccc
Confidence 23333333322234577889999999997643 67889999999999999999998887777 5589999999999975
Q ss_pred ccc--------c-------------C-CCcHHHHHHHHHHhcCeEEEcCCccCC-CCeEEEEeeC-ChHhHHHHHHHHHH
Q 038416 323 SML--------E-------------D-IGDDLEFCLKLAKEESVIILPGRTVGM-KNWLRIAFAA-EPATLEDGLERIKA 378 (387)
Q Consensus 323 ~~~--------~-------------~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~Ri~~~~-~~e~~~~~~~~l~~ 378 (387)
... . + ..++.+++..+++++||.+.||..|+. .+++||+++. +.+++++++++|++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~ 425 (433)
T PRK06855 346 GVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAE 425 (433)
T ss_pred ccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHH
Confidence 310 0 0 013567787888899999999999964 3579999974 88999999999999
Q ss_pred HHHHh
Q 038416 379 FCQRH 383 (387)
Q Consensus 379 ~~~~~ 383 (387)
++++.
T Consensus 426 ~~~~~ 430 (433)
T PRK06855 426 KIEEY 430 (433)
T ss_pred HHHHH
Confidence 99764
No 16
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-49 Score=343.20 Aligned_cols=356 Identities=24% Similarity=0.403 Sum_probs=314.8
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
|.+.+...|+- ++||++||.+++|+++.+..+. .+|+ .+..++.++++.|..+++++..+++.|++++|...+
T Consensus 23 g~~DvlPmWVA----DMDf~~pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg 95 (388)
T COG1168 23 GNEDVLPMWVA----DMDFPTPPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG 95 (388)
T ss_pred CCCCcceeeee----cccCCCCHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence 55677778884 5599999999999999999874 4787 466889999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC-CCccCChhhHHHhhccC-ceEEEEeCCCCCccc
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE-KRWEVDLDGVEALADEN-TVAIVIINPGNPCGN 163 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~-~~~v~l~~p~nptG~ 163 (387)
+..+++.|.++||.|++..|.|+++..... ..|.++...|+..+ +.|.+|.++||+++.+. .++.++||||||||.
T Consensus 96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~--~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Gr 173 (388)
T COG1168 96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIK--LNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGR 173 (388)
T ss_pred HHHHHHHhCcCCCeeEecCCCchHHHHHHh--hcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCc
Confidence 999999999999999999999999999999 99999999998744 45888999999988665 589999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCC--ccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI--VPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
+++.+++.+|.++|.+||+.||.||+|+++.+.|+.+.++.+++.+ ++.+++.|.||+|.++|+++++++.+++
T Consensus 174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~---- 249 (388)
T COG1168 174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR---- 249 (388)
T ss_pred cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH----
Confidence 9999999999999999999999999999999999877777776654 6899999999999999999999999873
Q ss_pred cchhHHHHHHhhh--hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEE
Q 038416 242 QNSGFVDSIKGCL--NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 242 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~ 318 (387)
++..++.+.. .....+|.++..|...+.++ ++.|+++..+.++.|++++.+.+.+ +|++. +..|++++.+|+
T Consensus 250 ---~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WL 324 (388)
T COG1168 250 ---ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWL 324 (388)
T ss_pred ---HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeee
Confidence 3444444332 34568899999999888885 6789999999999999999999997 79999 559999999999
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
++..... ++.+....++.+.+|.+.+|..|+. .+++|++++++.+.+++++++|+.+++..
T Consensus 325 D~r~l~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 325 DCRELGL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred eccccCC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 9987654 5567888888999999999999987 47999999999999999999999988764
No 17
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=369.07 Aligned_cols=358 Identities=20% Similarity=0.297 Sum_probs=296.4
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~ 86 (387)
+.+.+++.|+| +.+.++.+.+++.+.........|++..|..+||+.+++|+.+.+++.++++ +|++|+|+++++
T Consensus 33 ~~~~~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al 108 (403)
T PRK08636 33 EDIIDFSMGNP----DGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGY 108 (403)
T ss_pred CCEEEcCCcCC----CCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHH
Confidence 44577778776 5666777788877766544456899989999999999999998888888887 799999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhH----HHhhc---cCceEEEEeCCCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGV----EALAD---ENTVAIVIINPGN 159 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l----~~~~~---~~~~~v~l~~p~n 159 (387)
..++.+++++||.|++++|+|+.+...+. ..|.+++.++++.++++++|++.+ +++++ ++++++++++|||
T Consensus 109 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~N 186 (403)
T PRK08636 109 VHLVQAITNPGDVAIVPDPAYPIHSQAFI--LAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHN 186 (403)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHH--hcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCC
Confidence 99999999999999999999999999999 999999999886555678887754 55553 4688999999999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
|||.++|.+++++|+++|++|+++||+||+|.++.+++....++..++. .+++++++||||.|+++|+|+||+++++
T Consensus 187 PTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~-- 264 (403)
T PRK08636 187 PTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK-- 264 (403)
T ss_pred CCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH--
Confidence 9999999999999999999999999999999999887654555555543 2467889999999999999999999875
Q ss_pred CcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 239 GILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++++.+.+... ...+.+.+.|.++..++.. .+.++++..+.++++++.+.+.|++. ++. +..|.+|+|+|
T Consensus 265 ------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~p~~g~~~~ 335 (403)
T PRK08636 265 ------KLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWE-LQKPRASMFVW 335 (403)
T ss_pred ------HHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCcceEEE
Confidence 78888877654 2345667778777766653 46788888999999999999999987 676 44789999999
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
++++.... . .++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|+++++.+.
T Consensus 336 ~~l~~~~~-~-~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 336 AKIPEPAR-H-LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKELE 402 (403)
T ss_pred EECCCccC-C-CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 99874210 0 13567888888888999999998865 479999999889999999999999998764
No 18
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-49 Score=368.17 Aligned_cols=350 Identities=24% Similarity=0.377 Sum_probs=298.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.| ++++|+.+.+++.+.+.... ..|.+..|.+++|+.+++++.+.++..+++++|++|+|+++++..
T Consensus 33 ~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 33 DVIHLEIGEP----DFTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CeEEeCCCCC----CCCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 3456667666 67889999999999887543 468878899999999999999888888899999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|++++|+|+.+...+. ..|.++..++++.++++.+|++.++++++++++++++++|+||||.++|.+
T Consensus 108 ~~~~~~~~gd~vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~ 185 (387)
T PRK08960 108 ASSLLVDPGKHWLLADPGYPCNRHFLR--LVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRD 185 (387)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHH--hcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHH
Confidence 999999999999999999999999999 899999999987666788999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++|+++|+||+|.++.+++. ..++..+ .+++++++||||.|+++|+|+||+++++ ++++
T Consensus 186 ~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~~ 254 (387)
T PRK08960 186 ELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYFGMTGWRLGWLVAPP--------AAVP 254 (387)
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecccccCCcccEEEEEEcCH--------HHHH
Confidence 999999999999999999999999877543 2233333 3579999999999999999999999975 6888
Q ss_pred HHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 249 SIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
.+.+... ...+++.+.|.++..++.+..+.++.+..+.++++++.+.+.|+++ ++.++..|.+|+|+|++++...
T Consensus 255 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~--- 330 (387)
T PRK08960 255 ELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAFG--- 330 (387)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccccC---
Confidence 8876643 4456788899988888865445788888999999999999999987 6664447889999999987421
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.++.++...+++++||.+.||..|+. ++++||+++.+.+++.+++++|+++++
T Consensus 331 -~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 331 -GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 14567877887888999999998865 469999998888999999999988765
No 19
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=368.97 Aligned_cols=359 Identities=21% Similarity=0.357 Sum_probs=306.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++.+.|.| ++++++.+.+++.+.+... ..+|++..|..+||+++++++.+.++..+.+++|++|+|+++|+..
T Consensus 34 ~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 34 SIVDLTVGEP----DFDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred CEEEcCCCCC----CCCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 3466778776 7778899999999988754 3579998999999999999999888887889999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|..|...+. ..+.+++.++++.++++.+|++++++.++++++++++++|+||||.++|.+
T Consensus 109 ~~~~~~~~gd~vl~~~p~y~~y~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~ 186 (402)
T PRK06107 109 ALMATLEAGDEVIIPAPYWVSYPDMVL--ANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRA 186 (402)
T ss_pred HHHHhcCCCCEEEEecCCCcCHHHHHH--HcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHH
Confidence 999999999999999999999988888 888888888876556778999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhc-CcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 169 HLQKIARTARNL-GIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 169 ~~~~l~~~~~~~-~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
++++++++|+++ ++++|+||+|+.+.|.+....++..+.. .+++++++||||.|+++|+|+||+++++ +
T Consensus 187 ~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~--------~ 258 (402)
T PRK06107 187 ELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA--------D 258 (402)
T ss_pred HHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH--------H
Confidence 999999999998 9999999999998887655555544432 3589999999999999999999999875 7
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc-
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS- 323 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~- 323 (387)
+++.+..... ....++.+.|.++..+|+. .+.++++..+.++++++.+.+.|++++++. +..|++|+|+|++++..
T Consensus 259 ~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~ 336 (402)
T PRK06107 259 LIAAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLS-CLVPDGAFYLYVNCAGLI 336 (402)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEeeeccccc
Confidence 8888887764 4567899999999999974 357788889999999999999999887777 45889999999987421
Q ss_pred --ccc-C--CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 324 --MLE-D--IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 324 --~~~-~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
..+ + ..+..+++..+++++||.+.||..|+..+++||+++.+++++++++++|++++++++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~ 402 (402)
T PRK06107 337 GKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAALR 402 (402)
T ss_pred ccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhcC
Confidence 001 1 114567787888889999999999988899999999999999999999999988753
No 20
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-49 Score=366.81 Aligned_cols=349 Identities=23% Similarity=0.442 Sum_probs=296.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.|.| ++++++.+.+++.+..... ...|++..|..+||+.+++++.+.++..+++++|++|+|+++++..
T Consensus 30 ~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~ 104 (384)
T PRK06348 30 DIIDLSLGDP----DLITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYL 104 (384)
T ss_pred CcEEcCCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHH
Confidence 3567778776 6777888887666655433 4689998999999999999999888888999999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|..+...+. ..|.+++.+++.+++++.+|+++++++++++++++++++||||||.++|.+
T Consensus 105 ~~~~~~~~gd~vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~ 182 (384)
T PRK06348 105 ALQSILDPGDEVIIHEPYFTPYKDQIE--MVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKE 182 (384)
T ss_pred HHHHhcCCCCEEEEeCCCCcchHHHHH--HcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999 999999998876566788999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|++++++||+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++ +++
T Consensus 183 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~~ 253 (384)
T PRK06348 183 TLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YII 253 (384)
T ss_pred HHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HHH
Confidence 999999999999999999999999887652 334444432 4689999999999999999999999975 677
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+..... ...+++.+.|.++..++.. .+.++++..+.++++++.+.+.|+.++++. +..|++|+|+|++++...
T Consensus 254 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~~~~~~~~~-- 329 (384)
T PRK06348 254 ETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLS-LHPPKGSIYAFINIKKTG-- 329 (384)
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEecccCC--
Confidence 87776654 3466788899999888874 456778888889999999999999887776 447889999999986321
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
.++.+++..+++++||.+.||..|+. .+++||+++.+.+++++++++|++.
T Consensus 330 --~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 330 --LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 15677888887788999999999875 4799999988899999999998753
No 21
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.5e-49 Score=367.57 Aligned_cols=349 Identities=21% Similarity=0.324 Sum_probs=293.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
..++++.|+| +++.++.+.+++.+.+.......|++..|..+||+++++|+.+.++..++++ +|++|+|+++++.
T Consensus 33 ~~i~l~~~~p----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~ 108 (389)
T PRK08068 33 DVINLGQGNP----DQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLV 108 (389)
T ss_pred CeEEecCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 3467777766 6777888999999988765556898888999999999999988888778888 8999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...++ ..|+++..++++.++++.+|+++++++++++++++++++||||||.++|.
T Consensus 109 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~ 186 (389)
T PRK08068 109 ELPQCLMNPGDTILVPDPGYPDYLSGVA--LARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATK 186 (389)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHH--hcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCH
Confidence 9999999999999999999999999999 99999999998766678899999999888789999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc-cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV-FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++++++|+||+|.++.+++....++.. .+..+++++++||||.|+++|+|+||+++++ ++
T Consensus 187 ~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~l 258 (389)
T PRK08068 187 AFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE--------SV 258 (389)
T ss_pred HHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH--------HH
Confidence 99999999999999999999999998876533333322 2334578999999999999999999999865 78
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+.+... ...+.+++.|.++..++.. ...++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 259 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~~~~~g~~~~~v~~~~~-- 333 (389)
T PRK08068 259 IEAINLLQDHLFVSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACREI-GWE-VDAPKGSFFAWMPVPKG-- 333 (389)
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCCC--
Confidence 888877654 2334455577777777754 34778889999999999999999988 676 54788899999988642
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
.++.++...+++++||.+.||..|+. .+++||+++.+++.+.+++++|+++
T Consensus 334 ---~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 334 ---YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred ---CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 24667888887778999999988875 5799999988888999999888753
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4e-49 Score=367.06 Aligned_cols=347 Identities=23% Similarity=0.372 Sum_probs=295.2
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~ 88 (387)
.++.+.|+| ++++++.+.+++.+.+.......|++..|.++||+++++|+++.++..++++ +|++|+|+++++..
T Consensus 33 ~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~ 108 (385)
T PRK09276 33 VISLGIGDP----DLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAH 108 (385)
T ss_pred EEEecCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence 466777766 6788999999999988654456899888999999999999998778777777 59999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|++++|+|+.+...++ ..|.+++.+++..++++.+|++++++.+.+++++|++++|+||||.+++.+
T Consensus 109 ~~~~~~~~gd~Vl~~~P~y~~~~~~~~--~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 186 (385)
T PRK09276 109 IPLAFVNPGDVVLVPDPGYPVYKIGTI--FAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLE 186 (385)
T ss_pred HHHHhCCCCCEEEEcCCCCcChHHHHH--HcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999 999999999987666788899999998888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++++++|+||+|..+.+++....++..++. .+++++++||||.|+++|+|+||+++++ +++
T Consensus 187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------~l~ 258 (385)
T PRK09276 187 FFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------DLI 258 (385)
T ss_pred HHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------HHH
Confidence 9999999999999999999999998887655555555543 3568999999999999999999999875 688
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+.+... ...+.+.+.|.++..++.. .+.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~--- 332 (385)
T PRK09276 259 AGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG--- 332 (385)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC---
Confidence 88877643 3445666788888888864 46778888899999999999999988 677 44788899999998642
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.+..++...+++++||.+.||..|+. ++++||+++.+++++.+++++|.+
T Consensus 333 --~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 --YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred --CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 25667888888788999999988865 479999999888999999998864
No 23
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=8.1e-49 Score=364.74 Aligned_cols=348 Identities=24% Similarity=0.377 Sum_probs=296.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
...+++.|+| ++++++.+.+++.+.+.......|++..|..+||+++++|+.+.++..++++ +|++|+|+++++.
T Consensus 30 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~ 105 (383)
T TIGR03540 30 DVISLGIGDP----DLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA 105 (383)
T ss_pred CeEEeCCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH
Confidence 3456777766 6788999999999887655556899888999999999999998878777776 6999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++..++++||+|+++.|+|+.+...++ ..|.++..+++..++++.+|++++++.+.++++++++++||||||.+++.
T Consensus 106 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~--~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~ 183 (383)
T TIGR03540 106 HIPLAFVNPGDIVLVPDPGYPVYRIGTL--FAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPL 183 (383)
T ss_pred HHHHHhCCCCCEEEEeCCCCcchHHHHH--hcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCH
Confidence 9999999999999999999999999999 99999999998766678889999999888889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+||+|.++.+.+....++..++. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 184 ~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------~l 255 (383)
T TIGR03540 184 KFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------DL 255 (383)
T ss_pred HHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------HH
Confidence 99999999999999999999999998886655555555543 3568999999999999999999999865 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+++.+.|.++..++++. +.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~-- 330 (383)
T TIGR03540 256 IAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG-- 330 (383)
T ss_pred HHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC--
Confidence 887776653 34456777888888888753 6778888999999999999999998 777 44778899999998642
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.+..++...+++++||.+.||..|+. .+++||+++.+++++.+++++|++
T Consensus 331 ---~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 ---YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ---CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 24677888887888999999998864 479999999888999999988864
No 24
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=6.4e-49 Score=373.93 Aligned_cols=352 Identities=23% Similarity=0.416 Sum_probs=285.9
Q ss_pred cHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCCeEEEc
Q 038416 27 STVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGANILIP 103 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~~vl~~ 103 (387)
|..+.+++.+++... ....|++..|..+||++|++++.+.+|..+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~ 169 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIP 169 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEEC
Confidence 557788887766542 34579998999999999999999888888999999999999999999999998 799999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
.|+|..|...++ ..|.+++.++++++++|.+|+++|++++++ +++++++++||||||.++|.+++++|+++|
T Consensus 170 ~P~y~~y~~~~~--~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a 247 (481)
T PTZ00377 170 IPQYPLYSAAIT--LLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFC 247 (481)
T ss_pred CCCchhHHHHHH--HcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999 999999999998777899999999998864 688999999999999999999999999999
Q ss_pred HhcCcEEeecccccccccCC-CCCcccc----ccCC----CccEEEEecCccc-ccccccceEEEEeeCCCCcccchhHH
Q 038416 178 RNLGIIVIADEVYNHLAFGS-TPYVPMG----VFGS----IVPVITLGSISKR-WIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~-~~~~~~~----~~~~----~~~~~~i~s~sK~-~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|++||+||+|..+.|++ ..+.++. .+.. ..++++++||||. ++++|+|+||+++.+ .+++++
T Consensus 248 ~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~-----~p~~li 322 (481)
T PTZ00377 248 YEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTN-----IPPEVR 322 (481)
T ss_pred HHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeC-----CCHHHH
Confidence 99999999999999998853 3333332 2222 1368999999997 588999999999721 012688
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhcc------HHH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEE
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETN------EAF---FAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~ 318 (387)
+++.+......+++.++|.++..+++... +.+ +.+..+.++++++.+.+.|++++++. +..|++|+|+|+
T Consensus 323 ~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~ 401 (481)
T PTZ00377 323 EQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFP 401 (481)
T ss_pred HHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEe
Confidence 88877654344688899999999886311 123 33444457889999999999988888 448999999998
Q ss_pred ecCccc-c------cCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 319 KLNVSM-L------EDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 319 ~~~~~~-~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+++.+. . .+..++..++..+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++.+|
T Consensus 402 ~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 402 RIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred eccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence 764210 0 00112445677888899999999999974 36899999977889999999999999887764
No 25
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=6e-49 Score=364.96 Aligned_cols=352 Identities=22% Similarity=0.396 Sum_probs=298.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
..++.+.|.| ++++++.+.+++.+.+... ...|++..|..++|+++++++.++++..++++ +|++|+|+++++.
T Consensus 21 ~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 95 (378)
T PRK07682 21 GVISLGVGEP----DFVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALD 95 (378)
T ss_pred CeEEeCCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence 4567777776 6777888899998887643 45798888999999999999998888777775 7999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+.+...++ ..|.++..+++..++++.+|++++++++.++++++++++|+||||.++|.
T Consensus 96 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~ 173 (378)
T PRK07682 96 VAMRAIINPGDEVLIVEPSFVSYAPLVT--LAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNK 173 (378)
T ss_pred HHHHHhCCCCCEEEEeCCCchhhHHHHH--HcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCH
Confidence 9999999999999999999999999999 89999998887655678899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++++++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~ 244 (378)
T PRK07682 174 SELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YF 244 (378)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HH
Confidence 9999999999999999999999999988653 223333332 3679999999999999999999999976 78
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+++.+.|.++..+|++. +.++.+..+.++++++.+.+.|+++ ++. +..|.+++|+|+.++...
T Consensus 245 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~- 320 (378)
T PRK07682 245 SEAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG- 320 (378)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC-
Confidence 888876654 33567788999999998753 3557888899999999999999998 777 447889999998875311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++.++...+++++||.+.||..|+. ++++||+++.+.+++++++++|+++++++
T Consensus 321 ---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 ---LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred ---CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 14667888887788999999998865 58999999888999999999999998764
No 26
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.7e-48 Score=363.87 Aligned_cols=357 Identities=21% Similarity=0.337 Sum_probs=296.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
.+++.+.|.| ++++++.+.+++.+.+.......|++..|..+||+++++++++++|..++++ +|++|+|+++++.
T Consensus 31 ~~i~l~~~~p----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 106 (405)
T PRK09148 31 DIIDLGMGNP----DLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA 106 (405)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 3466777766 6788899999998887654456899988999999999999988778778887 8999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+.+...+. ..|.++..+++..++++..++++..+...++++++++++|+||||.++|.
T Consensus 107 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~--~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~ 184 (405)
T PRK09148 107 NMAQAITAPGDVILCPNPSYPIHAFGFI--MAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADL 184 (405)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccHHHHH--hcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999998889 89999999998655544444554444444678999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|++++++||+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 185 ~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~--------~~ 256 (405)
T PRK09148 185 DFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--------RL 256 (405)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--------HH
Confidence 99999999999999999999999998887654444444432 3467889999999999999999999865 78
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+.+... ...+++.+.|.++..+|.. .+.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++....
T Consensus 257 i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~~ 333 (405)
T PRK09148 257 IAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAWAPIPEAFR 333 (405)
T ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEEEECCCccC
Confidence 888877654 3456778899999988874 35778888999999999999999987 676 4478999999999874210
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
. .+..++...++++.||.+.||..|+. .+++||+++.+++++.+++++|.+++.++.
T Consensus 334 -~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 334 -H-LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred -C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 0 13467778887788999999998865 479999999889999999999999997764
No 27
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-48 Score=364.46 Aligned_cols=352 Identities=20% Similarity=0.340 Sum_probs=294.7
Q ss_pred cccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChH
Q 038416 5 KGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCS 83 (387)
Q Consensus 5 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~ 83 (387)
.|++ +++++.|+| +++.|+.+.+++.+.+.......|++..|.++||+++++|+.++++..++++ .|++|+|++
T Consensus 33 ~g~~-~i~l~~g~p----~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~ 107 (394)
T PRK05942 33 QGLD-LIDLGMGNP----DGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSK 107 (394)
T ss_pred cCCC-eEEcCCCCC----CCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChH
Confidence 3444 567777776 5666777888777776544456899889999999999999988777778887 489999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
+++..++.+++++||+|+++.|+|+.+...+. ..|.++..++++.+++|.+|++++++.++++++++++++|+||||.
T Consensus 108 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~ 185 (394)
T PRK05942 108 EGLTHLALAYVNPGDVVLVPSPAYPAHFRGPL--IAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTA 185 (394)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH--HcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCC
Confidence 99999999999999999999999999988888 8999999999876667889999999999889999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
+++.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+.+++++||||.|+++|+|+||+++++
T Consensus 186 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~------ 259 (394)
T PRK05942 186 TAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR------ 259 (394)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH------
Confidence 999999999999999999999999999998886654455544432 3457889999999999999999999865
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++++.++.... ...+.+.+.|.++..+++. .+.++++..+.++++++.+.+.|+.+ ++. +..|.+|+|+|++++
T Consensus 260 --~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~ 334 (394)
T PRK05942 260 --HIIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCP 334 (394)
T ss_pred --HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECC
Confidence 78888887653 3456777889998888864 35678888899999999999999887 676 447888999999987
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
.. .++.++..++++++||.+.||..|+. .+++||+++.+.+.+.+++++|.++
T Consensus 335 ~~-----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 335 VG-----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred CC-----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 42 14567777788889999999998864 5799999987788899998888664
No 28
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.1e-48 Score=365.18 Aligned_cols=345 Identities=25% Similarity=0.371 Sum_probs=291.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~a~ 86 (387)
.+++.+.|.| ++++++.+.+++.+.+.. ...|++..|..+||+++++|+.+.++.. ++++ +|++|+|+++++
T Consensus 30 ~~i~l~~~~p----~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 30 PPISLSIGEP----KHPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred CeEecCCCCC----CCCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 4567778776 788899999999887652 4689988899999999999998888877 7875 899999999999
Q ss_pred HHHHHhhcCC---CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 87 EISLSVLARP---GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 87 ~~~~~~l~~~---g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
..++++++++ ||.|+++.|+|..+...+. ..|.+++.+|++++++|.+|++++++.+.++++++++++||||||.
T Consensus 104 ~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 181 (396)
T PRK09147 104 FAFAQTVIDRDGPGPLVVCPNPFYQIYEGAAL--LAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGA 181 (396)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCccchHHHHH--hcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCc
Confidence 9999999999 8999999999999999999 9999999999977778899999999888778999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCC-CCcc-cc---ccC--CCccEEEEecCcccccccccceEEEEeeC
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVP-MG---VFG--SIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~-~~---~~~--~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
++|.+++++|+++|++|+++||+||+|..+.+++. ...+ +. .+. ..+++++++||||.|+++|+|+||+++++
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~ 261 (396)
T PRK09147 182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence 99999999999999999999999999999887653 1111 11 111 23689999999999999999999999875
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
++++.+.+... ...+++.+.|.++...+.. +.++.+..+.++++++.+.+.|++. +. +..|.+|+|
T Consensus 262 --------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~~g~f 328 (396)
T PRK09147 262 --------ALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV--LD-VQLPDAGFY 328 (396)
T ss_pred --------HHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh--cC-CCCCCeeEE
Confidence 68888876654 3456777888887766643 5678888899999999999998874 44 347899999
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--------CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+|++++. ++.+++..+++++||.+.||..|+. .+++||+++.+++++.+++++|++++.
T Consensus 329 ~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 329 LWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred EEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 9999872 4567888888888999999988752 478999999889999999999988764
No 29
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.4e-48 Score=363.62 Aligned_cols=355 Identities=24% Similarity=0.414 Sum_probs=297.3
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
++..++++.|.| ++++++.+.+++.+.+... ...|++..|..+||+.+++|+++.++..+++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al 103 (388)
T PRK07337 29 GRDIIHMGIGEP----DFTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL 103 (388)
T ss_pred CCCEEEeCCcCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH
Confidence 344567777766 6778899999999888643 45788888999999999999998888888999999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||+|+++.|+|..+...+. ..|.+++.++++.++++.+|++++++.++++++++++++|+||||.+++
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 181 (388)
T PRK07337 104 LLACLALVERGDEVLMPDPSYPCNRHFVA--AAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIA 181 (388)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHH--HcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcC
Confidence 99999999999999999999999998888 8999999999876667899999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|+++|+++++++|+||+|..+.+.+. ..+...+ .+++++++|+||.|+++|+|+||+++++ ++
T Consensus 182 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~~~~G~RiG~~~~~~--------~l 250 (388)
T PRK07337 182 PDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL--GDDVITINSFSKYFNMTGWRLGWLVVPE--------AL 250 (388)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc--cCCEEEEEechhhcCCchhheeeeecCH--------HH
Confidence 99999999999999999999999998877654 2222222 3568999999999999999999999875 67
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+.+.+.|.++..++......++.+..+.++++++.+.+.|+++ ++.....|++|+|+|++++....
T Consensus 251 ~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~ 329 (388)
T PRK07337 251 VGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAH 329 (388)
T ss_pred HHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccC
Confidence 888876653 3456788889988888865434556777888999999999999987 55533368899999999874221
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
++..++.+++..+++++||.+.||..|+. .+++||+++.+++++.+++++|.+++
T Consensus 330 ~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 330 PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 22225667888888889999999998865 47999999888999999999998765
No 30
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.6e-48 Score=360.25 Aligned_cols=345 Identities=24% Similarity=0.396 Sum_probs=295.3
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
..+++.+.|.| ++++|+.+ +++.+++..... .|++..|.++||+.+++++. .+++++|++|+|+++++.
T Consensus 26 ~~~~~~~~~e~----~~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 26 SCIDSLTLEEL----LALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGANF 94 (373)
T ss_pred CCCCCCcHHHH----HhccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHHHH
Confidence 34566778877 78888888 888887776544 89988899999999999984 357899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...++ ..|.+++.+++..++++.+|+++++++++++++++++++|+||||.+++.
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~--~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~ 172 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPE--SLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR 172 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHH--HcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999 99999999999877778899999999998899999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+|++|.++.+++. ..++... .+++++++|+||.|+++|+|+||+++++ +++
T Consensus 173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~~--------~li 241 (373)
T PRK07324 173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAANE--------EVI 241 (373)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecCH--------HHH
Confidence 9999999999999999999999999887643 2333322 3467999999999999999999999865 788
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+.+.+. .+.+++.+.|.++..+++. .+..+++..+.++++++.+.+.|++.+++. +..|.+|+++|+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~--- 316 (373)
T PRK07324 242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD--- 316 (373)
T ss_pred HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence 88887764 3456677888888887763 456778888888999999999998877777 44888898888888642
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++.+++.++++++||.+.||..|+.++++||+++.+++.+.+++++|+++++++
T Consensus 317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 2567888988888999999999998889999999988999999999999998764
No 31
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-48 Score=359.13 Aligned_cols=352 Identities=27% Similarity=0.458 Sum_probs=299.4
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+..++++.|.| ++++++.+.+++.+.+.+.. ..|++..|.++||+++++++.+.++..+++++|++|+|+++++.
T Consensus 24 ~~~i~l~~g~~----~~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~ 98 (382)
T PRK06108 24 EGVLPLWFGES----DLPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALM 98 (382)
T ss_pred CCeEEecCCCC----CCCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHH
Confidence 34567778777 78889999999999887643 46998889999999999999988887788999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC-CCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE-KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
.++.+++++||+|+++.|+|..+...+. ..|.+++.++++.+ .+|.+|++++++.++++++++++++|+||||..+|
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~ 176 (382)
T PRK06108 99 LAAQALVGPGDEVVAVTPLWPNLVAAPK--ILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTAS 176 (382)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHH--HCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccC
Confidence 9999999999999999999999999999 99999999998653 45779999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccC-CCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFG-STPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
.+++++|+++|+++|+++|+||+|+++.++ +....++..+. ..+++++++|+||.|+++|+|+||+++++
T Consensus 177 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-------- 248 (382)
T PRK06108 177 RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-------- 248 (382)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------
Confidence 999999999999999999999999998876 22222322332 24679999999999999999999999975
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+..... ...+++.+.|.++..++.+. +.++++..++++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~ 326 (382)
T PRK06108 249 ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGV 326 (382)
T ss_pred HHHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCC
Confidence 68888776643 34567888899988888753 56778888999999999999999887888 44788999999988642
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.+..+++..+++++||.+.||..|+. .+++|++++.+++++++++++|+++++
T Consensus 327 -----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 -----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred -----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 24567888888888999999988854 579999998899999999999998775
No 32
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-48 Score=361.21 Aligned_cols=353 Identities=23% Similarity=0.409 Sum_probs=300.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++.+.|.| ++++++.+.+++++++... ...|.+..|..+||+++++++.+.++..+++++|++|+|+++++..
T Consensus 34 ~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 108 (391)
T PRK08361 34 NVISLGIGEP----DFDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYL 108 (391)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHH
Confidence 3566777766 7778899999999987654 3468777899999999999998877878889999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|++++|+|.++...+. ..|.+++.++++.++++.+|++++++.++++++++++++|+||||.++|.+
T Consensus 109 ~~~~l~~~g~~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~ 186 (391)
T PRK08361 109 AFESLLEEGDEVIIPDPAFVCYVEDAK--IAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKE 186 (391)
T ss_pred HHHHhcCCCCEEEEcCCCCcccHHHHH--HcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHH
Confidence 999999999999999999999999999 899999999987766788999999999988999999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++++++|+||+|+.+.+++....++..+.. +++++++|+||.|+++|+|+||+++++ ++++
T Consensus 187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~--------~~~~ 257 (391)
T PRK08361 187 VAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPE--------QVIK 257 (391)
T ss_pred HHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCH--------HHHH
Confidence 9999999999999999999999998876544444444332 578999999999999999999999975 6777
Q ss_pred HHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 249 SIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
.+..... ...+.+.+.|.++..++++.. +.++++..+.++++++.+.+.|+.++++. +..|.+|+|+|++++...
T Consensus 258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~-- 334 (391)
T PRK08361 258 DMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VFEPKGAFYVFANIDETG-- 334 (391)
T ss_pred HHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCCEEEEEEEECCCCC--
Confidence 7766543 345677888999888887643 35688888999999999999999987777 557888999999886321
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++++
T Consensus 335 --~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 335 --MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 14667888777778999999998865 4799999998889999999999998865
No 33
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=357.56 Aligned_cols=354 Identities=21% Similarity=0.303 Sum_probs=293.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~a~ 86 (387)
.+++.+.|.| ++++++.+.+++.+.+.......|++ .|..+||+++++|+.+.++.. ++++ +|++|+|+++++
T Consensus 45 ~~i~L~~g~p----~~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al 119 (410)
T PRK06290 45 ELIDMGVGEP----DEMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPAL 119 (410)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHH
Confidence 3567778776 77889999999988775443456875 899999999999998887876 8886 799999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||.|+++.|+|..+...++ ..|.++..++++.++++.+|++++++++.+++++|++++||||||.+++
T Consensus 120 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~--~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s 197 (410)
T PRK06290 120 AMLPSCFINPGDVTLMTVPGYPVTGTHTK--YYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT 197 (410)
T ss_pred HHHHHHhCCCCCEEEEeCCCCccHHHHHH--HcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence 99999999999999999999999999999 9999999999987667888999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
.+++++|+++|++++++||+||+|..+.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++ +
T Consensus 198 ~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~--------~ 268 (410)
T PRK06290 198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE--------L 268 (410)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH--------H
Confidence 99999999999999999999999999887653 223333332 3567999999999999999999999865 6
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++.+..... ...+.+.+.|.++..++++ ..++++..+.++++++.+.+.|+++ ++. +..|++++++|++++...
T Consensus 269 l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~~~ 344 (410)
T PRK06290 269 IVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPKGT 344 (410)
T ss_pred HHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCCcc
Confidence 8888876654 3345556788888888875 3567888899999999999999988 677 447889999999987532
Q ss_pred ccC--CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhh
Q 038416 325 LED--IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 325 ~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~ 384 (387)
..+ ..+..++.+.|+++.++.+.||..|+ +++||+++ .++++.++.++.|.+.|.++.
T Consensus 345 ~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 345 KSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 111 02466888888888788888987653 79999997 367889999999988887653
No 34
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-47 Score=355.77 Aligned_cols=353 Identities=22% Similarity=0.337 Sum_probs=297.1
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~ 88 (387)
..+++.|.+ ++++++.+.+++.+.+.......|++..|..++|+.+++++.+.+|..++ +++|++|+|+++++..
T Consensus 29 ~~~l~~g~~----~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 29 TISLGQGVV----SYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred eEEccCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 355556655 68899999999999876554567988899999999999999988887766 6789999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|..+...++ ..|.+++.++.+ .++.+|+++++++++++++++++++|+||||..+|.+
T Consensus 105 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 105 AILAITDPGDEIILNTPYYFNHEMAIT--MAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred HHHHhcCCCCEEEEeCCCCcCHHHHHH--hcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHH
Confidence 999999999999999999999888888 899999999873 4568999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++|+++|+||+|.++.+++....+...+ +...+++++.||||.|+++|+|+||+++++ +++
T Consensus 181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 252 (389)
T PRK05957 181 LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------HLL 252 (389)
T ss_pred HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------HHH
Confidence 99999999999999999999999988765433333232 344579999999999999999999999875 788
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+++..... ...+++.+.|.++..+|++ ...++++..+.++++++.+.+.|++++++..+..|.+|+|+|++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~--- 328 (389)
T PRK05957 253 EAIKKIQDTILICPPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD--- 328 (389)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC---
Confidence 88887654 3456677899998888874 346678888889999999999999887652255788899999998642
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEee-CChHhHHHHHHHHHHHHHHhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFA-AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.+++..+++++||.+.||..|+. ++++||+++ .+++++++++++|.+.++++.
T Consensus 329 --~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 329 --LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred --CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 25678888888888999999998865 469999996 578999999999999988764
No 35
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=358.64 Aligned_cols=359 Identities=26% Similarity=0.443 Sum_probs=304.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
...++.+.|+| ++++++.+.+++.+.+... ...|++..|..+||+.+++++.+.++..+++++|++|+|+++++.
T Consensus 31 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 31 RDVISLGAGEP----DFDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred CCEEEeCCCCC----CCCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 34567778777 7788899999999988754 346888889999999999999888777788899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...++ ..|.++..+++++++++.+|++.+++.++++++++++++|+||||.++|.
T Consensus 106 ~~~~~~~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~ 183 (393)
T PRK05764 106 NAFMALLDPGDEVIIPAPYWVSYPEMVK--LAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSP 183 (393)
T ss_pred HHHHHhcCCCCEEEecCCCCcchHHHHH--HcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCH
Confidence 9999999999999999999999999999 99999999998766678899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc--CCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF--GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
+++++|+++|++||+++|+|++|..+.+++....++..+ +..+++++++|+||.++++|+|+||+++++ +
T Consensus 184 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~--------~ 255 (393)
T PRK05764 184 EELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPK--------E 255 (393)
T ss_pred HHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCH--------H
Confidence 999999999999999999999999988765444444443 223578999999999999999999999865 7
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++++..... ....++++.|.++..+++. .+.++++..+.+.++++.+.+.|++++++. +..|.+++++|++++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~~~~ 333 (393)
T PRK05764 256 LIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLE-CPKPEGAFYVFPNVSKLL 333 (393)
T ss_pred HHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCCCcceEEEEeccccc
Confidence 8888876653 4557788899998888873 457788888999999999999999987888 447888999999886521
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+...++.++...+++++||.+.||..|+..+++||+++.+++++++++++|.++++++
T Consensus 334 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 334 GKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred ccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 11001246777888788899999999888789999999889999999999999998865
No 36
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=3.6e-47 Score=355.61 Aligned_cols=368 Identities=27% Similarity=0.426 Sum_probs=293.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
...++++.|+|..+ ++++++.+.+++.+.... ...|++..|..+||+++++++......++++++|++|+|+++++.
T Consensus 33 ~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 33 HKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred CCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 34566678888543 577889999998887653 457999899999999999999765444788999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...+. ..|.+++.++++.++++.+|+++++++++++++++++++|+||||..++.
T Consensus 110 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~ 187 (404)
T PRK09265 110 MAMQALLNNGDEVLVPAPDYPLWTAAVS--LSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSK 187 (404)
T ss_pred HHHHHhCCCCCEEEEeCCCCcChHHHHH--HcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCH
Confidence 9999999999999999999999999998 88999888887655567899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+||+|.++.+++....++..+..+.++++++||||.|+++|+|+||++++.+.... +.++
T Consensus 188 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~~ 265 (404)
T PRK09265 188 ELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGYI 265 (404)
T ss_pred HHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHHH
Confidence 99999999999999999999999998887655555555555557899999999999999999999975321100 0233
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+........+++.++|.++..+|..... ..+.+..+.+.++++.+.+.|++++++. +..|.+|+|+|++++....
T Consensus 266 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~~g~~l~~~~~~~~~- 343 (404)
T PRK09265 266 EGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVS-CVKPKGALYAFPKLDPKVY- 343 (404)
T ss_pred HHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEEEEeccccc-
Confidence 434332233456788899999888864221 1122223466777888999998887877 5589999999999864211
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+..++.+++..++.++||.+.||..|+. ++++|++++.+.+++++++++|+++++.+.
T Consensus 344 ~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 344 PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 1113455666777889999999998853 579999998889999999999999988654
No 37
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4.1e-47 Score=352.98 Aligned_cols=353 Identities=23% Similarity=0.430 Sum_probs=296.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~ 86 (387)
+.+++...|.| +++.++.+.+++.+.+... ...|++..|..+||+.+++++.+.++..++++ +|++|+|+++|+
T Consensus 28 ~~~i~l~~~~p----~~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al 102 (387)
T PRK07683 28 DNLISLTIGQP----DFPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI 102 (387)
T ss_pred CCeEEecCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 34566777766 6778899999999988754 45788888999999999999988778788888 999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||+|+++.|+|..+...++ ..|.+++.++.+. +++.+|.+.+++.++++++++++++|+||||.+++
T Consensus 103 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s 179 (387)
T PRK07683 103 DIAFRTILEPGTEVILPAPIYPGYEPIIR--LCGAKPVFIDTRS-TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLS 179 (387)
T ss_pred HHHHHHhCCCCCEEEEcCCCccchHHHHH--HcCCEEEEeecCc-ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999999999 9999999998753 56778889999998888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
.+++++|+++|+++|+++|+|++|+++.+.+. ..++..+ +..+++++++|+||.|+++|+|+||+++++ +
T Consensus 180 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~--------~ 250 (387)
T PRK07683 180 KEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS--------Y 250 (387)
T ss_pred HHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH--------H
Confidence 99999999999999999999999999887653 3344444 234679999999999999999999999875 6
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++++..... ...+++.+.|.++..+|.+. +.++++..+.++++++.+.+.|++. ++. +..|.+|+|+|+.++...
T Consensus 251 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~ 327 (387)
T PRK07683 251 LAKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISM-GLD-VEKPTGAFYLFPSIGHFT 327 (387)
T ss_pred HHHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCeeEEEEEecccCC
Confidence 7888776543 23455678899998888753 3567778888999999999999887 676 547889999998876421
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.+++..+++++||.+.||..|.. ++++||+++.+++++.+++++|.+++++..
T Consensus 328 ----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~~ 385 (387)
T PRK07683 328 ----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQKA 385 (387)
T ss_pred ----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 14567777778889999999998865 479999998889999999999999887654
No 38
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-47 Score=354.40 Aligned_cols=347 Identities=22% Similarity=0.386 Sum_probs=290.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
..+++..|.| ++++++.+.+++.+.+... ...|++..|..+||+.+++++.+.+|...++ ++|++|+|+++++.
T Consensus 30 ~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 30 DALNLSQGAP----NFAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 3566767766 6788999999999877654 3579888999999999999999888876655 68999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++++++++||+|+++.|+|..+...++ ..|.+++.++++. +++.+|++.++++++++++++++++|+||||.+++.
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 105 AAISALVHPGDEVIYFEPSFDSYAPIVR--LQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHH--HcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999 8999999998753 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence 99999999999999999999999998887654444544432 4579999999999999999999999975 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+.+... ...+++.+.|.++..++.+.. +..+..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~- 328 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS- 328 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence 888877653 356778889999999887532 23456778889999999999987 677 447889999998886311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
+ .++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.+
T Consensus 329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 1 13557777777889999999998853 478999999889999999999864
No 39
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-48 Score=339.78 Aligned_cols=349 Identities=27% Similarity=0.443 Sum_probs=294.9
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHHHHH
Q 038416 13 PWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLS 91 (387)
Q Consensus 13 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~ 91 (387)
+.-|.| ++++|+-+.+++++++.....+.|....|.++|++.|++.+.+.+|....+ ++|++|+|+.+++..++.
T Consensus 36 LgqGfp----~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFP----DFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCC----CCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 444445 999999999999999998777899999999999999999999977755555 579999999999999999
Q ss_pred hhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC------CCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 92 VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL------PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 92 ~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
.++.+||.|++++|.|..|..... ..|..++.++.. ..++|.+|.++++.++.++|++|++++||||||.++
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~--maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvf 189 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVV--MAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVF 189 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHh--hcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCccc
Confidence 999999999999999999999999 999999999887 456789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
|.+++++|+++|++||+++|.||+|..+.+++..+..+..+ +..++++.++|++|+|++.|||+||+++++
T Consensus 190 sReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~-------- 261 (420)
T KOG0257|consen 190 SREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK-------- 261 (420)
T ss_pred CHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------
Confidence 99999999999999999999999999999998766665554 446789999999999999999999999954
Q ss_pred hHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc------H-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 038416 245 GFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN------E-AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFV 316 (387)
Q Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~------~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 316 (387)
.+........ +..+..+++.|.+...++.... . .+.....+.++++++.+.+.|+++ |+. +..|++++|+
T Consensus 262 ~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl 339 (420)
T KOG0257|consen 262 HLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYL 339 (420)
T ss_pred HhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEE
Confidence 4555554443 3566777778888777766422 1 334448999999999999999999 899 5599999999
Q ss_pred EEecCccc----ccCC---CcHHHHHHHHHHhcCeEEEcCCccCCCC-------eEEEEeeCChHhHHHHHHHHH
Q 038416 317 MVKLNVSM----LEDI---GDDLEFCLKLAKEESVIILPGRTVGMKN-------WLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 317 ~~~~~~~~----~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~-------~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
|++++... .+++ .++..+...++++.|+.+.|++.|+.+. .+|+++..+++.++.+.++++
T Consensus 340 ~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 340 WADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred EEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 99998211 1111 1345677888999999999999998754 566667778888888888887
No 40
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-47 Score=354.66 Aligned_cols=353 Identities=25% Similarity=0.391 Sum_probs=295.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
..++++.|.| +.+.|+.+.+++.+.+... ...|++..|..+||+++++++.+.+++.++++ +|++|+|+++++.
T Consensus 27 ~~i~l~~g~p----~~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 101 (387)
T PRK08912 27 GAINLGQGFP----DDPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA 101 (387)
T ss_pred CeEEccCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH
Confidence 4577778777 5666788888888876543 35799989999999999999988888888888 9999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...++ ..|.+++.+++++ +++.+|++++++.+.++++++++++|+||||.++|.
T Consensus 102 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 178 (387)
T PRK08912 102 AALLALVEPGDEVVLFQPLYDAYLPLIR--RAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPR 178 (387)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHH--HcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCH
Confidence 9999999999999999999999999999 9999999998753 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++++++|+||+|..+.+++....++..+.. .+++++++|+||.|+++|+|+||+++++ ++
T Consensus 179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~ 250 (387)
T PRK08912 179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------PL 250 (387)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------HH
Confidence 99999999999999999999999998887644444444432 3578999999999999999999999875 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+.++..+.++..++.. .+.++++..+.++++++.+.+.|+.+ ++. +..|.+++|+|++++....
T Consensus 251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 251 LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI-GFP-VLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEecccccCC
Confidence 888776643 2355566678887777753 35678888899999999999999988 677 4478889999998864210
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
..++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|++++++
T Consensus 328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 024667888887888999999998843 4799999998899999999999988764
No 41
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=3.5e-47 Score=355.22 Aligned_cols=360 Identities=28% Similarity=0.487 Sum_probs=298.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
..+++.+.|.|.. .++++++.+.+++.+.+... ...|++..|..+||+.+++|++..+++++++++|++|+|+++++.
T Consensus 30 ~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 107 (398)
T PRK08363 30 IKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ 107 (398)
T ss_pred CCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 3567777888743 46788999999999988654 347887889999999999999988888899999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..+...+. ..|..++.++...++++.+|+++++++++++++++++++|+||||.+++.
T Consensus 108 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 185 (398)
T PRK08363 108 LIFGALLDPGDEILIPGPSYPPYTGLVK--FYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEK 185 (398)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHH--HcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCH
Confidence 9999999999999999999999999999 89988887743334567789999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+|++|..+.+.+. ..++..+....++++++||||.|+++|+|+||+++.++ ++++
T Consensus 186 ~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~------~~~~ 258 (398)
T PRK08363 186 KTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP------EGKL 258 (398)
T ss_pred HHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc------HHHH
Confidence 9999999999999999999999999887653 23344455556799999999999999999999998221 1455
Q ss_pred HHHHhhh----hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 248 DSIKGCL----NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 248 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
+.+.... ....+++.+.|.++..++.. .+.++.+..+.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 259 ~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~ 336 (398)
T PRK08363 259 AEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEEG 336 (398)
T ss_pred HHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEeccC
Confidence 5554332 12356788899999888864 457888889999999999999999887777 55788999999888641
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
. ..++.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|++++++.
T Consensus 337 ~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 337 P---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred C---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 1 013456777777889999999998865 47999999888899999999999988764
No 42
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.6e-47 Score=355.45 Aligned_cols=343 Identities=24% Similarity=0.363 Sum_probs=287.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCC-CEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK--LSPE-DVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~--~~~~-~i~~~~g~~~a 85 (387)
..++++.|.| ++++++.+.+++++.... ...|++..|.++||+++++|+.+.++.+ ++++ +|++|+|++++
T Consensus 29 ~~i~l~~~~p----~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~a 102 (393)
T TIGR03538 29 PPIALSIGEP----KHPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREA 102 (393)
T ss_pred CeEEecCCCC----CCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHH
Confidence 4456777776 778899999999987753 4689998999999999999998877765 6775 79999999999
Q ss_pred HHHHHHhhcCCCCe--EEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 86 IEISLSVLARPGAN--ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 86 ~~~~~~~l~~~g~~--vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
+..++.+++++||+ |+++.|+|..+...+. ..|.+++.+++.+++++.+|++++++++.++++++++++||||||.
T Consensus 103 l~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~ 180 (393)
T TIGR03538 103 LFAFAQAVINPGQAPLVVMPNPFYQIYEGAAL--LAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGA 180 (393)
T ss_pred HHHHHHHHcCCCCcceEEecCCCCcchHHHHH--hcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCc
Confidence 99999999999986 9999999999999999 9999999999976777889999999988778999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCC-CCcc-cc---cc--CCCccEEEEecCcccccccccceEEEEeeC
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVP-MG---VF--GSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~-~~---~~--~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+++.+++++|+++|+++|++||+||+|..+.+.+. ...+ +. .. ...+++++++||||.|+++|+|+||+++++
T Consensus 181 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~ 260 (393)
T TIGR03538 181 VLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDA 260 (393)
T ss_pred ccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCH
Confidence 99999999999999999999999999999887642 2211 11 11 123579999999999999999999999875
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
++++.+.+... ...+.+.+.|.++...+.. +.++++..+.++++++.+.+.|+++ +. +..|.+|+|
T Consensus 261 --------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg~f 327 (393)
T TIGR03538 261 --------EILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--LD-LELPDAGFY 327 (393)
T ss_pred --------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCeeEE
Confidence 68888876654 3456677888887777753 5678888899999999999999875 33 337899999
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--------CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+|++++. ++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|.+.
T Consensus 328 ~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 328 LWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred EEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 9999872 4567888887888999999998752 4689999988899999999999764
No 43
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.8e-47 Score=361.68 Aligned_cols=354 Identities=21% Similarity=0.374 Sum_probs=282.7
Q ss_pred CCCCcHHHHHHHHHHhcC--C-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCC
Q 038416 23 LLSDSTVAEDAVVDALRT--A-HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGA 98 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~ 98 (387)
++|. .+++...+.+.. . ....|++..|.++||+.|++|+.+++|..+++++|++|+|+++++..++.+++ .+||
T Consensus 140 ~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd 217 (534)
T PLN02231 140 LFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKD 217 (534)
T ss_pred cCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCC
Confidence 4444 444444455543 2 35679999999999999999999988888999999999999999999999998 4799
Q ss_pred eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHH
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
.|+++.|+|+.|...+. ..|.+++.++++++++|++|+++|+++++. ++++++++||+||||.+++.+++++
T Consensus 218 ~Vli~~P~Y~~y~~~~~--~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~ 295 (534)
T PLN02231 218 GILCPIPQYPLYSASIA--LHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRD 295 (534)
T ss_pred EEEEeCCCChhHHHHHH--HcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHH
Confidence 99999999999999999 999999999998777899999999998864 6789999999999999999999999
Q ss_pred HHHHHHhcCcEEeecccccccccC-CCCCccccccC-------CCccEEEEecCcccc-cccccceEEEEeeCCCCcccc
Q 038416 173 IARTARNLGIIVIADEVYNHLAFG-STPYVPMGVFG-------SIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~ 243 (387)
|+++|+++|++||+||+|.++.|+ +..+.++..+. .+.++++++|+||.+ +++|+|+||+++... +
T Consensus 296 Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~ 370 (534)
T PLN02231 296 IVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF-----T 370 (534)
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecC-----C
Confidence 999999999999999999999985 34444443331 123689999999975 789999999987420 1
Q ss_pred hhHHHHHHhhhhccCCcchHHHHHHHHHhhhc-----c-HH---HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 244 SGFVDSIKGCLNAASHPVTFIQAAVPRIVDET-----N-EA---FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
+++++.+.+......+++.+.|.++..+++.. . +. +.++..+.++++++.+.+.|++++++.+ ..|++|+
T Consensus 371 ~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~-~~p~Ggf 449 (534)
T PLN02231 371 SDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC-NKAEGAM 449 (534)
T ss_pred HHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-cCCCeee
Confidence 36888887665444566778888888888531 1 22 2334568899999999999999888884 4899999
Q ss_pred EEEEecCccc--cc-----CCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 315 FVMVKLNVSM--LE-----DIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 315 ~~~~~~~~~~--~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
|+|+++..+. .. +..++..++..+++++||.+.||..|+. ..+||+++..+++++++++++|++++++..
T Consensus 450 ylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 450 YLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred EEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 9996654210 00 0112334567788889999999999975 346999998899999999999999988876
Q ss_pred hc
Q 038416 385 KK 386 (387)
Q Consensus 385 ~~ 386 (387)
++
T Consensus 530 ~~ 531 (534)
T PLN02231 530 DE 531 (534)
T ss_pred HH
Confidence 53
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=7.6e-47 Score=351.70 Aligned_cols=353 Identities=22% Similarity=0.425 Sum_probs=294.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
..++.+.|.| ++++++.+.+++.+.+... ...|++..|.+++|+.+++++...+++.+.+ ++|++|+|+++++.
T Consensus 31 ~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~ 105 (391)
T PRK07309 31 GILKLTLGEP----DFTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALS 105 (391)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence 4567777666 6788899999999887643 3578888899999999999998877776664 78999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCcccc
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNV 164 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~ 164 (387)
.++.+++++||+|+++.|+|.++...++ ..|.+++.++.+ ++++.+|++.++++++. +++++++++|+||||.+
T Consensus 106 ~~~~~~~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 106 ASLTAILEPGDKVLLPAPAYPGYEPIVN--LVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT 182 (391)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHH--HcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence 9999999999999999999999999999 999999998874 34567899999998864 57899999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
++.+++++|+++|++||+++|+|++|+++.+++....++..+.. +++++++|+||.|+++|+|+||+++++
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG~~v~~~-------- 253 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIGLIFAPA-------- 253 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccceeEEEEeCH--------
Confidence 99999999999999999999999999999886644445444433 679999999999999999999999976
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+..... ...+++.+.|.++..++.+.. .+.....+.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~p~gg~~~~~~l~~~ 330 (391)
T PRK07309 254 EFTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDL-GFK-IIKPDGAFYIFAKIPAG 330 (391)
T ss_pred HHHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEECCCC
Confidence 78888876543 335678889999999887643 234556677888899999999887 677 54788999999988642
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.. .++.+++..+++++||.+.||..|+. ++++||+++.+.+++++++++|+++++++.
T Consensus 331 ~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 331 YN---QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CC---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 10 14567787888888999999998865 579999998888999999999999998764
No 45
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.7e-47 Score=356.85 Aligned_cols=344 Identities=18% Similarity=0.201 Sum_probs=281.5
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
..+++++.|++ ++++++.+.+++.+++... ....|++..|..+||+++++|+.+.++..+++++|++|+|++
T Consensus 34 ~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 34 AKIIRLGIGDV----TQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CceEEecCcCC----CCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 34677778776 7889999999999988752 345788889999999999999988888889999999999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce-----------eeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE-----------ARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
+++..+. .++.+||+|++++|+|..+...++ ..|.+ ++.++++.++++..+.++ ++++++
T Consensus 110 ~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~--~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i 180 (409)
T PRK07590 110 CDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNV--MAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDII 180 (409)
T ss_pred HHHHHHH-HhcCCCCEEEEeCCCCcchHHHHH--HcCCcccccccccccceeEeecccccCCcccCcc------cCceEE
Confidence 9999875 456899999999999999999999 88986 888888655556555332 578999
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..++. .+++++++||||.|+++|+|+||
T Consensus 181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~ 260 (409)
T PRK07590 181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAY 260 (409)
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEE
Confidence 99999999999999999999999999999999999999998876643444555543 34789999999999999999999
Q ss_pred EEeeCCCCcccchhHHHH------------HHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh
Q 038416 232 LVTSDPNGILQNSGFVDS------------IKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (387)
+++++ ++++. +..... ...+++.+.|.++..++....+.++++..+.++++++.+.+.|
T Consensus 261 ~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 261 TVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred EEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99975 56552 111111 1235678899998888875445788888999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHH
Q 038416 299 KEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
+.+ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 333 ~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl 405 (409)
T PRK07590 333 ESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERI 405 (409)
T ss_pred Hhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHH
Confidence 988 676 44678999999998742 24567788888888999999998865 4699999877899999999999
Q ss_pred HHH
Q 038416 377 KAF 379 (387)
Q Consensus 377 ~~~ 379 (387)
.++
T Consensus 406 ~~~ 408 (409)
T PRK07590 406 KKA 408 (409)
T ss_pred Hhh
Confidence 875
No 46
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.3e-47 Score=353.77 Aligned_cols=349 Identities=21% Similarity=0.330 Sum_probs=296.2
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~ 86 (387)
+.+++++.|.| +++.++.+.+++.+.+... ...|++..|..++|+.+++++.+.++...+++ +|++|+|+++++
T Consensus 30 ~~~i~l~~g~~----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFP----DFDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCC----CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 45577778776 6778899999999987653 35788888999999999999988777666665 899999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||+|+++.|+|..+...++ ..|.+++.++++. .++.+|++++++.++++++++++++|+||||.+++
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIE--LAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWS 181 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHH--HcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999999999 8999999999864 35789999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
.+++++|+++|+++++++|+|++|.++.+++....++..+.. .+++++++||||.|+++|+|+||+++++ +
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~ 253 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------A 253 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------H
Confidence 999999999999999999999999998887654445544433 4689999999999999999999999875 7
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++.+.+... ...+++.+.|.++..++.. .+.++++..+.++++++.+.+.|++. ++. +..+++|+|+|++++..
T Consensus 254 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~- 329 (386)
T PRK09082 254 LSAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI- 329 (386)
T ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc-
Confidence 8888877653 4567788899998888863 45677888889999999999999986 677 44788999999998741
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
++ .++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|++
T Consensus 330 -~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 330 -SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred -CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 11 25677888888899999999998743 478999998889999999999864
No 47
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1e-46 Score=350.81 Aligned_cols=349 Identities=25% Similarity=0.299 Sum_probs=293.8
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
.++++.|.| ++++++.+.+++.+.........|++..|.++||+.+++++.+.++..+++++|++|+|+++++..+
T Consensus 31 ~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 106 (386)
T PRK07550 31 LIDLSQAVP----GYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAA 106 (386)
T ss_pred eEEeCCCCC----CCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence 566777666 6677899999999887654556798888999999999999998888888899999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+.+++++||+|+++.|+|..+...++ ..|.+++.+++++++++.+|+++++++++++++++++++|+||||.++|.++
T Consensus 107 ~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 184 (386)
T PRK07550 107 MVTLAGAGDEVILPLPWYFNHKMWLD--MLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPEL 184 (386)
T ss_pred HHHhcCCCCEEEEcCCCCcchHHHHH--hcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHH
Confidence 99999999999999999999998999 9999999999876667788999999999888999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccc-cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV-FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|+++|+++|+++|+|++|+++.+.+....++.. .+..++++++.||||.|+++|+|+||+++++ ++++
T Consensus 185 ~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~--------~~~~ 256 (386)
T PRK07550 185 LHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP--------ARIA 256 (386)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH--------HHHH
Confidence 999999999999999999999988654322222222 2234578999999999999999999999975 6777
Q ss_pred HHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 249 SIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
.+..... ...+++.+.|.++..++.. .+.++++..+.++++++.+.+.|+.++++. + .+.+|+|+|++++...
T Consensus 257 ~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~g~~~~~~~~~~~~--- 330 (386)
T PRK07550 257 EIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWE-L-LASGAYFAYVRHPFPD--- 330 (386)
T ss_pred HHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCce-e-CCCceEEEEecCCCCC---
Confidence 7776654 4556788899999888875 456777888889999999999998875665 3 4678999999886411
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeC-ChHhHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAA-EPATLEDGLERIKAF 379 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~-~~e~~~~~~~~l~~~ 379 (387)
.++.+++..+++++||.+.||..|+. .+++||+++. +++++++++++|.++
T Consensus 331 -~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 331 -RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred -CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 15678888888888999999998864 5799999974 789999999999764
No 48
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.6e-46 Score=349.67 Aligned_cols=353 Identities=24% Similarity=0.397 Sum_probs=294.7
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~ 86 (387)
..+++++.|.| +.+.++.+.+++.+.+... ..+|++..|..++|+++++++.+.++....++ +|++|+|+++++
T Consensus 24 ~~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 98 (387)
T PRK07777 24 TGAVNLGQGFP----DEDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI 98 (387)
T ss_pred CCeEEccCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 35678888887 5666778888888877654 35798888999999999999988888777776 799999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC-CCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE-KRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
..++.+++++||+|+++.|+|..+...+. ..|.+++.+++++. .++.+|++++++.+++++++|++++|+||||..+
T Consensus 99 ~~~~~~~~~~gd~vli~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~ 176 (387)
T PRK07777 99 AAAVLGLVEPGDEVLLIEPYYDSYAAVIA--MAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVL 176 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHH--HCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccC
Confidence 99999999999999999999999999989 89999999988765 3677999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+.+++++|+++|+++++++|+|++|.++.+.+....++..+.. .+++++++||||.|+++|+|+||+++++
T Consensus 177 ~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-------- 248 (387)
T PRK07777 177 TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-------- 248 (387)
T ss_pred CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------
Confidence 9999999999999999999999999998886654444444432 4578999999999999999999999875
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+..... .....+.+.|.++..++.. .+.++++..+.++++++.+.+.|+++ ++. +..|.+++|+|++++..
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~g~~~~~~~~~~~ 325 (387)
T PRK07777 249 PLIAAVRAAKQYLTYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEA-GFE-VHDSAGTYFLCADPRPL 325 (387)
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhC-CCC-ccCCCcceEEEeccccc
Confidence 67877776543 3445677788888887764 35778888899999999999999987 677 44788899999887531
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC-----CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM-----KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
. ..++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|+++..
T Consensus 326 ~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 326 G---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred C---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 1 124678888888888999999988753 358999998889999999999987653
No 49
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.8e-46 Score=344.37 Aligned_cols=339 Identities=24% Similarity=0.377 Sum_probs=284.2
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHH
Q 038416 12 SPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISL 90 (387)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~ 90 (387)
++..|+| ++++++.+.+++++.... ...|++..|..+||+++++++.+.+|+.++++ +|++|+|+++++..++
T Consensus 4 ~~~~g~p----~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 4 DFGTGDP----KEPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred eccCCCC----CCCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 4556665 788899999999988643 56799888999999999999998888888887 9999999999999999
Q ss_pred HhhcCCC---CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 91 SVLARPG---ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 91 ~~l~~~g---~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.+++++| |.|+++.|+|..+...++ ..|.+++.++++.++++.+|+++++++++++++++++++|+||||.+++.
T Consensus 78 ~~~~~~g~~~d~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 78 LVFIDPEEDRRRVIFGTPGYPVYERGAL--FAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHcCCCCCCceEEEcCCCCcchHHHHH--hcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 9999877 699999999999999999 99999999998766778899999999998899999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++|+||.++++|+|+||+++++ ++.
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence 999999999999999999999999876654 333333333 3579999999999999999999999764 677
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.++.... ...+.+++.|.++...+.. +.++.+..+.++++++.+.+.|+.+ ++. +..|.+|+|+|++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~--- 298 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG--- 298 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence 77776643 3344555677777666653 4667788889999999999999887 677 54788899999998742
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.+..++...+++ +||.+.||..|+. .+++||+++.+++++++++++|++
T Consensus 299 --~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 --IDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred --CCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 145677777754 6999999998865 589999998788999999998865
No 50
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-46 Score=348.80 Aligned_cols=352 Identities=27% Similarity=0.438 Sum_probs=294.2
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
+++...|.| ++++++.+.+++.+... ....|++..|..++|+.+++++. ..+.++++++|++|+|+++++..+
T Consensus 32 ~i~l~~~~~----~~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~ 104 (397)
T PRK07568 32 VYHLNIGQP----DIKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFA 104 (397)
T ss_pred EEEecCCCC----CCCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHH
Confidence 455666665 77788999999987654 24578888899999999999998 467778899999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccC-ChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEV-DLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+.+++++||+|+++.|+|..+...++ ..|.++..++++.++++.. +++++++++++++++|++++|+||||.+++.+
T Consensus 105 ~~~l~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 182 (397)
T PRK07568 105 MMAICDPGDEILVPEPFYANYNGFAT--SAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKE 182 (397)
T ss_pred HHHhcCCCCEEEEecCCCccHHHHHH--HcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHH
Confidence 99999999999999999999988888 8999999998865555543 57999999988999999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++|+++|+|++|.++.+++....++..+.. .+++++++|+||.|+++|+|+||+++++ ++++
T Consensus 183 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~-------~~~~ 255 (397)
T PRK07568 183 ELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKN-------KELI 255 (397)
T ss_pred HHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCC-------HHHH
Confidence 9999999999999999999999999887654445555443 4689999999999999999999999853 2577
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+......+++.+.|.++..+++. .+.++++..+.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 256 ~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~---- 329 (397)
T PRK07568 256 AAAMKLCQARLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVV-CEKPKGAFYIIAKLPVD---- 329 (397)
T ss_pred HHHHHHhhccCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCcceEEEEecCCC----
Confidence 666554333456788899999998875 357788889999999999999999887776 55788999999998641
Q ss_pred CCcHHHHHHHHHHh-----cCeEEEcCCccCC-----CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 328 IGDDLEFCLKLAKE-----ESVIILPGRTVGM-----KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 328 ~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+..++...++++ +||.+.||..|.. ++++||+++.+++++++++++|.++++++.+
T Consensus 330 --~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 330 --DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred --CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 456777777654 6999999988832 3699999988889999999999999988663
No 51
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-46 Score=355.25 Aligned_cols=329 Identities=20% Similarity=0.347 Sum_probs=271.4
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCC--CCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccC-CC
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPY--KLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN-NN 120 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~--~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~-~g 120 (387)
..|++..|..+||+++|+|+.+.++. .+++++|++|+|+++++..++.+++++||.|+++.|+|..+...+. . .|
T Consensus 80 ~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~--~~~g 157 (468)
T PLN02450 80 ALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK--WRTG 157 (468)
T ss_pred hcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh--hcCC
Confidence 45888889999999999999987664 4688999999999999999999999999999999999999876655 4 79
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.+++.+++..++++.++++.+++++.+ +++++++++||||||.++|.+++++|+++|++++++||+||+|+++.
T Consensus 158 ~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 158 VEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTV 237 (468)
T ss_pred cEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccc
Confidence 999999987667888899999987753 68899999999999999999999999999999999999999999988
Q ss_pred cCCCCCcccccc---------CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHH
Q 038416 195 FGSTPYVPMGVF---------GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQ 265 (387)
Q Consensus 195 ~~~~~~~~~~~~---------~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (387)
|.+..+.++... +..+++++++||||.|+++|+|+||+++++ +.+.+.+.+... ....+.+.|
T Consensus 238 f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q 309 (468)
T PLN02450 238 FDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQ 309 (468)
T ss_pred cCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHH
Confidence 876544332211 134689999999999999999999999974 134555544432 234678899
Q ss_pred HHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc-cCCCcHHHHHHHHHHhc
Q 038416 266 AAVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML-EDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 266 ~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~ 342 (387)
.++..+|++.. ..++.+..++++++++.+.+.|+++ ++. +..|.+|+|+|++++.... ..+....++...+++++
T Consensus 310 ~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~ 387 (468)
T PLN02450 310 YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEV 387 (468)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhC
Confidence 99999998743 2467888899999999999999998 777 4478899999999864211 01112345777788888
Q ss_pred CeEEEcCCccCC--CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhh
Q 038416 343 SVIILPGRTVGM--KNWLRIAFAA-EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 343 gi~v~~g~~~~~--~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~ 384 (387)
||.+.||..|+. ++||||+++. +++++++++++|++++++..
T Consensus 388 gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 388 KLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999998865 5799999985 89999999999999997765
No 52
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-46 Score=346.26 Aligned_cols=340 Identities=22% Similarity=0.327 Sum_probs=277.7
Q ss_pred cccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 5 KGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 5 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
++...+++++.|.| ++++++.+.+++.+.... ...|++..|..+||++++++++++++..+++++|++|+|+++
T Consensus 21 ~~~~~~i~l~~~~p----~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~ 94 (374)
T PRK05839 21 NKEYKGLDLTIGEP----QFETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTRE 94 (374)
T ss_pred cCCCCeEEcCCCCC----CCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence 33445666667766 678889999999887643 568999889999999999999988888889999999999999
Q ss_pred HHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCcc
Q 038416 85 AIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162 (387)
Q Consensus 85 a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG 162 (387)
++..++.+++ ++||.|+++.|+|+.+...+. ..|++++.++++.++++.+|+...+ + ++++++++++||||||
T Consensus 95 al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~--~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG 169 (374)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI--ASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTG 169 (374)
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCchhhHHHHH--hcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcC
Confidence 9999988774 578999999999999999999 9999999999876667777665432 2 4689999999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc------CCCccEEEEecCcccccccccceEEEEeeC
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF------GSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
.+++.+++++|+++|+++|++||+||+|.++.+.+ ...++... ...+++++++||||.|+++|+|+||+++++
T Consensus 170 ~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~ 248 (374)
T PRK05839 170 RTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA 248 (374)
T ss_pred cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH
Confidence 99999999999999999999999999999976433 22232211 123689999999999999999999999865
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
++++++..... .....+.+.|.++..++.. +.++++..+.++++++.+.+.| ++. .|.+|+|
T Consensus 249 --------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~f 311 (374)
T PRK05839 249 --------SILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFY 311 (374)
T ss_pred --------HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEE
Confidence 68888876643 3456677788888777753 5677888888888888777655 333 6789999
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+|++++ +..++...+++++||.+.||..|+. .+++||+++.+++++.+++++|+++++
T Consensus 312 i~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 312 VWLPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EEEeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 999986 3467888887778999999987764 489999998889999999999998874
No 53
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-46 Score=348.98 Aligned_cols=356 Identities=24% Similarity=0.365 Sum_probs=300.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--C-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--H-YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
...+++..|.| ++.+.+...+.+++...+... . ...|.+..|..+||+.|++++....|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p--~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLP--DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCC--CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 44555556554 224456667777777777532 2 457888899999999999999988999999999999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEe-CCCCCcc
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVII-NPGNPCG 162 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~-~p~nptG 162 (387)
|+..+++.+++|||+|++++|+|++....++ ..|++++.+|++. .++|+++|++.+.. +.++++++ +.|||||
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~--~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG 241 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALE--ALGARVIPVPVDE---DGIDPEALEEALAQWKPKAVYVTPTFQNPTG 241 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHH--HcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEEEECCCCCCCCC
Confidence 9999999999999999999999999999999 9999999999863 37899999998876 35555444 3389999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
.+||.++.++|+++|++||++||+||.|+.+.+++.+..++..++..+++++++||||. ..||+|+||++++.
T Consensus 242 ~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~------ 314 (459)
T COG1167 242 VTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP------ 314 (459)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH------
Confidence 99999999999999999999999999999999998888888889888999999999999 69999999999986
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCceEEEEEe
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDET-NEAFFAKIIGLLKETADICYERIKEI-PCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~g~~~~~~ 319 (387)
++++++...+. ....++.+.|.+++..+.++ .+.++.+.++.++++++.+.+.|+++ |+...++.|.+|+|+|++
T Consensus 315 --~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~ 392 (459)
T COG1167 315 --ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLE 392 (459)
T ss_pred --HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEE
Confidence 78888888764 56788999999999998853 37888999999999999999999985 434447789999999999
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEc-CCccCCC----CeEEEEeeC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILP-GRTVGMK----NWLRIAFAA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~~----~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
++.. .+..+++... .++|+.+.| |..|... +++|++++. +.+++++++++|.+++++...
T Consensus 393 l~~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 393 LPEG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred cCCC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9864 2556666665 556999998 8888653 489999964 789999999999999987653
No 54
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.9e-46 Score=352.95 Aligned_cols=329 Identities=20% Similarity=0.358 Sum_probs=269.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccC-CC
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLP--YKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN-NN 120 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~-~g 120 (387)
..|++..|.++||+++|+|+.+.+| ..+++++|++|+|+++++..++.+++++||.|+++.|+|..+...+. . .|
T Consensus 88 ~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~--~~~G 165 (496)
T PLN02376 88 ANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR--WRTG 165 (496)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH--hhCC
Confidence 4577788999999999999998777 56889999999999999999999999999999999999999987655 4 79
Q ss_pred ceeeeeccCCCCCccCChhhHHHhh------ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALA------DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
++++.+++..+++++++++.+++++ ..+++++++++|+||||.+++.+++++|+++|++++++||+||+|+.+.
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 9999999876667889999997653 2367889999999999999999999999999999999999999999998
Q ss_pred cCCCCCcccccc----CC----CccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHH
Q 038416 195 FGSTPYVPMGVF----GS----IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQA 266 (387)
Q Consensus 195 ~~~~~~~~~~~~----~~----~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (387)
|++..+.++..+ +. .++++++.||||.|+++|+|+||+++++ +.+.+.++.... ....+.+.|.
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~ 317 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQL 317 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHH
Confidence 877656554443 11 1357789999999999999999999854 145554444332 3457888999
Q ss_pred HHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc--cCCCcHHHHHHHHHHhc
Q 038416 267 AVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML--EDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 267 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~ 342 (387)
++..++++.. +.++.+..++++++++.+.+.|++. ++.+. .|.+|+|+|++++.... ....+..++...++++.
T Consensus 318 a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~-~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~ 395 (496)
T PLN02376 318 MLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL-TSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKV 395 (496)
T ss_pred HHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcC
Confidence 9999998643 3556677888999999999999887 77744 78999999999965321 11112356777787888
Q ss_pred CeEEEcCCccCC--CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhh
Q 038416 343 SVIILPGRTVGM--KNWLRIAFAA-EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 343 gi~v~~g~~~~~--~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~ 384 (387)
||.+.||..|+. ++||||+++. +++.+++++++|++++.+.+
T Consensus 396 gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 396 KLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999864 6899999984 78999999999999987544
No 55
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.1e-46 Score=348.50 Aligned_cols=351 Identities=21% Similarity=0.343 Sum_probs=281.9
Q ss_pred CCcHHHHHHHHHHhcC-----------CCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEcCChHHHHHHHHH
Q 038416 25 SDSTVAEDAVVDALRT-----------AHYNCYSPTLGVPSARRGIADYLNRDLP--YKLSPEDVYLTLGCSQAIEISLS 91 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~~ 91 (387)
...+.+.+.+++.... .+...|.+..|..+||+++|+++.+.++ .++++++|++|+|+++++..++.
T Consensus 59 l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~ 138 (447)
T PLN02607 59 VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTF 138 (447)
T ss_pred hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHH
Confidence 3445566666664321 1234577778999999999999998776 35789999999999999999999
Q ss_pred hhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccC
Q 038416 92 VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 92 ~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~ 165 (387)
+++++||.|+++.|.|+++...+. ...|.+++++++..++++.++++.++++++. ++++++++||+||||.++
T Consensus 139 ~l~~pGD~Vlv~~P~Y~~f~~~~~-~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~ 217 (447)
T PLN02607 139 ILADPGDALLVPTPYYPGFDRDLR-WRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATV 217 (447)
T ss_pred HhCCCCCEEEEcCCCCcchHHHHH-hcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCccc
Confidence 999999999999999999876554 0368899999887667788999999998753 678999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc----C--C-CccEEEEecCcccccccccceEEEEeeCCC
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF----G--S-IVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~----~--~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
|.+++++|+++|+++++++|+||+|+++.|++.++.++..+ + . .++++++.|+||.|+++|+|+||+++.+
T Consensus 218 s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n-- 295 (447)
T PLN02607 218 QRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN-- 295 (447)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC--
Confidence 99999999999999999999999999988876555554332 1 1 4679999999999999999999999843
Q ss_pred CcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 038416 239 GILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFV 316 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 316 (387)
+++...++.... ...++.+.|.++..+|++.. +.++.+..++++++++.+.+.|++. ++. +..+.+|+|+
T Consensus 296 -----~~l~~~~~~~~~-~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~~~~~ag~fv 367 (447)
T PLN02607 296 -----DKVVTTARRMSS-FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE-CLKGNAGLFC 367 (447)
T ss_pred -----HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-cccCCeeEEE
Confidence 246565654432 23567789999999998743 3667888899999999999999987 777 4478899999
Q ss_pred EEecCcccc-cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhhhc
Q 038416 317 MVKLNVSML-EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAA-EPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 317 ~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
|++++.... +......++..++++++||.+.||..|+. ++||||+++. +++.+++++++|.+++++.+.+
T Consensus 368 w~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 368 WMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTA 441 (447)
T ss_pred EEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999864211 01112345666787888999999998865 6899999985 8999999999999999887754
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.3e-45 Score=344.07 Aligned_cols=353 Identities=18% Similarity=0.303 Sum_probs=291.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
.+.+.+.|+| +.+.++.+.+++.+.+.......|++..|..+||+++++|+.+.+++.++++ ++++|+|+++++.
T Consensus 30 ~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~ 105 (395)
T PRK08175 30 DIIDFSMGNP----DGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA 105 (395)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH
Confidence 3456667766 5666777888888877655557899989999999999999998888888877 7999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCCCcccc
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGNPCGNV 164 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~ 164 (387)
.++..++++||+|+++.|+|..+...+. ..|.++..++++.+++ ..++++++++ ++++++++++|+||||..
T Consensus 106 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 106 HLMLATLDHGDTVLVPNPSYPIHIYGAV--IAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHH--HcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 9999999999999999999999888888 8999999998865433 4677877765 468899999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||+++++
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------- 253 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------- 253 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH-------
Confidence 99999999999999999999999999998886654455444432 3567899999999999999999999865
Q ss_pred hhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 244 SGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
++++++.+... ...+.+.+.|.++..++.. .+.++++..+.++++++.+.+.|+.+ ++. +..|.+|+|+|++++.
T Consensus 254 -~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~~ 329 (395)
T PRK08175 254 -ELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIPE 329 (395)
T ss_pred -HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECCc
Confidence 78888877654 3456667788888888864 35678888899999999999999988 676 4478899999999975
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
... . .++.+++..+++++||.+.||..|+. ++++||+++.+++.+.+++++|++++++.
T Consensus 330 ~~~-~-~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 330 PYA-A-MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred ccC-C-CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 210 0 13567777787888999999988864 46899999888899999999999998753
No 57
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=5.4e-45 Score=343.56 Aligned_cols=335 Identities=17% Similarity=0.182 Sum_probs=276.6
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
.++.+.|+| +.+++|.+.+++.+.... ...|++..|..+||+.+++|+....+ .+++|++|+|+++++..+
T Consensus 87 ~i~L~~g~p----~~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~ 157 (431)
T PRK15481 87 LHDLAGGNP----DPQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERL 157 (431)
T ss_pred hhhhhcCCC----ChhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHH
Confidence 345556655 666667788888876543 34799888999999999999875322 356999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEe-CCCCCccccCCHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVII-NPGNPCGNVFSYQ 168 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~-~p~nptG~~~~~~ 168 (387)
+.+++++||.|++++|+|+.+...++ ..|++++.++++.+ ++|++++++++++++++++++ +||||||.+++.+
T Consensus 158 ~~~l~~pgd~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~ 232 (431)
T PRK15481 158 LCAHLLPGDSVAVEDPCFLSSINMLR--YAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR 232 (431)
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHH--HcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence 99999999999999999999999999 99999999998532 479999999988788888887 9999999999999
Q ss_pred HHHHHHHHHHhc-CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNL-GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~-~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++ +++||+||+|.++.+.+. ...+. . ..+++++++||||.|+ +|+|+||+++++ +++
T Consensus 233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~~-~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~~ 300 (431)
T PRK15481 233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVIP-Q-TTQRWALIRSVSKALG-PDLRLAFVASDS--------ATS 300 (431)
T ss_pred HHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCCc-C-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HHH
Confidence 999999999999 999999999999875432 12222 2 2358999999999998 999999999875 688
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
+.+..... .....+.+.|.++..+|++.. +.++.+..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 301 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~--- 375 (431)
T PRK15481 301 ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT--- 375 (431)
T ss_pred HHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC---
Confidence 88865543 335578899999999998744 4668888999999999999999987 676 4479999999999873
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeC-ChHhHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAA-EPATLEDGLERIKAFC 380 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~-~~e~~~~~~~~l~~~~ 380 (387)
+..++...+ .++||.+.||..|+. .+++||+++. +++++++++++|++++
T Consensus 376 ----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 376 ----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred ----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 345666666 567999999998854 3689999974 7899999999998876
No 58
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-45 Score=340.24 Aligned_cols=359 Identities=19% Similarity=0.248 Sum_probs=274.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHh-hcCCCCC-C--CCCEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLN-RDLPYKL-S--PEDVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~-~~~~~~~-~--~~~i~~~~g~~~ 84 (387)
..++.+.|.| ++++|+.+.+++... .. .+|+++.|..++|++|++++. +.++... . .++|++|+|+++
T Consensus 101 ~~i~l~~g~p----~~~~~~~v~e~~~~~-~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 101 DAVSYVRDQL----GFDADEFVYELVDGI-IG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHhhcCCCC----CCCCCHHHHHHHHHH-hc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 3466778877 999999999955544 33 259999999999999999554 3333222 2 348999999999
Q ss_pred HHHHHHHh-----hcCCCCeEEEcCCCCcchHHHhhccCCC--ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCC
Q 038416 85 AIEISLSV-----LARPGANILIPRPGYPLYEIHAAGSNNN--LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINP 157 (387)
Q Consensus 85 a~~~~~~~-----l~~~g~~vl~~~p~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 157 (387)
++..++.+ ++++||+|+++.|+|+.|...+. ..| ..++.++.+++++|.+|+++++++++++++++++++|
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP 250 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNP 250 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCC
Confidence 99999886 68999999999999999998877 654 5556666556677999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 158 GNPCGNVFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
+||||.+++.+++++|+++|++ ++++||+||+|..+.+. +.++... ..++++++.||||.|+++|+|+||++++
T Consensus 251 ~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 251 SNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 9999999999999999999964 59999999999987642 2233222 2358999999999999999999999987
Q ss_pred CCCCcc----------------------cch---hHHHHH----Hhh-hhccCCcchHHHHHHH-----HHhhhccHHHH
Q 038416 236 DPNGIL----------------------QNS---GFVDSI----KGC-LNAASHPVTFIQAAVP-----RIVDETNEAFF 280 (387)
Q Consensus 236 ~~~~~~----------------------~~~---~~~~~~----~~~-~~~~~~~~~~~~~~~~-----~~l~~~~~~~~ 280 (387)
+..... .+| .+++++ ++. .+.+.+.+.+.|.+++ +++. ..+.+.
T Consensus 327 ~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-~~~~~~ 405 (527)
T PRK09275 327 EDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-EEDAYK 405 (527)
T ss_pred chhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh-CchHHH
Confidence 621000 000 022222 222 2356677888888632 3344 345778
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc-----------cCCCcHHHHHHHHHHhcCeEEEcC
Q 038416 281 AKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML-----------EDIGDDLEFCLKLAKEESVIILPG 349 (387)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~~~~~~~ll~~~gi~v~~g 349 (387)
++..+.++++++.+.+.|. + .+. ...|.+++|+|++++.... ....++.+++..|+++.||.+.||
T Consensus 406 ~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG 482 (527)
T PRK09275 406 KAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPG 482 (527)
T ss_pred HHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCc
Confidence 8889999999998888772 2 222 2368999999998864211 011246789999999999999999
Q ss_pred CccCC-CCeEEEEee-CChHhHHHHHHHHHHHHHHhhh
Q 038416 350 RTVGM-KNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 350 ~~~~~-~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
..|+. .+++|||++ .+++++.+++++|++.+.++..
T Consensus 483 ~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 483 GGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred hhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 99985 568999998 5889999999999999988764
No 59
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.4e-44 Score=337.81 Aligned_cols=341 Identities=18% Similarity=0.209 Sum_probs=271.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
.+++.+.|.+ ++++++.+.+++.+.+.+. ....|.+..|.++||+++++++.+. .+++++|++|+|+++
T Consensus 34 ~~i~l~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~Ga~~ 106 (402)
T TIGR03542 34 DIIRLGIGDT----TQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDGAKC 106 (402)
T ss_pred CeEEcCCCCC----CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCCcHH
Confidence 3566667665 7788999999999988652 2346877789999999999986432 378899999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCc-----------eeeeeccCCCCCccCChhhHHHhhccCceEEE
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNL-----------EARHYDLLPEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
++..+. .++.+||+|+++.|+|..+...++ ..|. ++..++++.++++..++++ .+++++++
T Consensus 107 al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~ 178 (402)
T TIGR03542 107 DVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNV--MAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIY 178 (402)
T ss_pred HHHHHH-HhcCCCCEEEEeCCCCcchHHHHH--HcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEEE
Confidence 999865 556799999999999999999999 9999 8888887655556555432 14789999
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
+++||||||.+++.+++++|+++|++++++||+||+|.++.+++..+.++..++. .+++++++||||.|+++|+|+||+
T Consensus 179 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~ 258 (402)
T TIGR03542 179 LCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWT 258 (402)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEE
Confidence 9999999999999999999999999999999999999998876543344444443 357899999999999999999999
Q ss_pred EeeCCCCcccchhHH--------HHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 233 VTSDPNGILQNSGFV--------DSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
++++ +++ ..+.... ....+++.+.|.++..++......++.+..+.++++++.+.+.|++. +
T Consensus 259 i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~ 329 (402)
T TIGR03542 259 VVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-G 329 (402)
T ss_pred EecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9975 443 2222211 22335677889888888875444556677788899999999999887 6
Q ss_pred CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 304 ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 304 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. .+++||+++.+++++.+++++|+++
T Consensus 330 ~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 330 FK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred ce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 66 44667899999998742 24567888888888999999998865 4799999877899999999999875
No 60
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-44 Score=334.59 Aligned_cols=353 Identities=23% Similarity=0.404 Sum_probs=285.2
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
|.+.+++++.|+| ++++++.+.+++.+..... ....|++..|..++|+.+++++.+.++..+++++|++|+|++
T Consensus 31 ~~~~~~~l~~g~p----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~ 106 (394)
T PRK06836 31 GADNVFDFSLGNP----SVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106 (394)
T ss_pred CCCCeEEecCcCC----CCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence 4455667777765 6778899999999887642 245788888999999999999998888788899999999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
+++..++.+++++||.|+++.|+|..+...++ ..|.+++.++++++ ++.+|+++++++++++++++++++|+||||.
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~--~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~ 183 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVD--NHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGV 183 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH--HcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCc
Confidence 99999999999999999999999999999989 99999999998643 4689999999999889999999999999999
Q ss_pred cCCHHHHHHHHHHHHh------cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 164 VFSYQHLQKIARTARN------LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~------~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
++|.+++++|+++|++ ||+++|+|++|.++.+++.....+.. ..+++++++|+||.|+++|+|+||+++++.
T Consensus 184 ~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~ 261 (394)
T PRK06836 184 VYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLSLPGERIGYIAVNPE 261 (394)
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhccCcceeeEEEecCHH
Confidence 9999999999999999 89999999999998876543333322 235789999999999999999999998751
Q ss_pred CCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 238 NGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
. .....+...+..... .....+++.|.++..++++. ...+.++++++.+.+.|+++ ++. +..|.+|+|
T Consensus 262 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~ 331 (394)
T PRK06836 262 M--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTEL-GFE-CVKPQGAFY 331 (394)
T ss_pred H--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhC-CCE-eecCCceEE
Confidence 0 000001111111111 11356777899988888752 12456777888888999888 677 447888999
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+|++++.. +..+++.. +.++||.+.||..|...+++||+++.+++++++++++|+++++++.
T Consensus 332 ~~~~~~~~------~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 332 LFPKSPEE------DDVAFCEK-AKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EEEeCCCC------CHHHHHHH-HHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 99987641 45667654 4777999999998887889999999889999999999999998764
No 61
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=2.7e-45 Score=339.45 Aligned_cols=348 Identities=29% Similarity=0.504 Sum_probs=290.6
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHH-HhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVD-ALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
+++++.|++......+.++.+.+++.+ .........|++..|.++||+++++++++..+...+++ +|++++|+.+++.
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~ 82 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALF 82 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHH
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchh
Confidence 456667666232222366666666665 33334567999999999999999999987677778888 9999999999999
Q ss_pred HHHHhh-cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCC
Q 038416 88 ISLSVL-ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNP 160 (387)
Q Consensus 88 ~~~~~l-~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~np 160 (387)
.+...+ .++|++|+++.|+|+.+...++ ..|.+++.+++..++++.+|+++|++.+++ +++++++++|+||
T Consensus 83 ~~~~~~~~~~~~~vlv~~P~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP 160 (363)
T PF00155_consen 83 LLLRLLKINPGDTVLVPDPCYPSYIEAAR--LLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP 160 (363)
T ss_dssp HHHHHHHSSTTSEEEEEESSSTHHHHHHH--HTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred hhhhcccccccccceecCCcccccccccc--ccCceeeeccccccccccccccccccccccccccccccceeeecccccc
Confidence 999999 7899999999999999999999 999999999987778889999999999877 5789999999999
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
||..+|.+++++|+++|+++|+++|+||+|+.+.++...+.+ ........+++++.|+||.|+++|+|+||+++++
T Consensus 161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~--- 237 (363)
T PF00155_consen 161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP--- 237 (363)
T ss_dssp TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH---
T ss_pred cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh---
Confidence 999999999999999999999999999999999887553333 3444555569999999999999999999999975
Q ss_pred cccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccH--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 240 ILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNE--AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++++.++........ +.+.+.++..++.+... .+++++.++++++++.+.+.|++. ++.+. .+.+|+++|
T Consensus 238 -----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~ 309 (363)
T PF00155_consen 238 -----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVL-PPEAGFFLW 309 (363)
T ss_dssp -----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEE-HHSBSSEEE
T ss_pred -----hhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhhee-eccCccEEE
Confidence 788888877653333 77788888888876542 388999999999999999999988 88844 677999999
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERI 376 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l 376 (387)
+.++.. +..++.++|+++.||.+.||..|+.++++||++ +.+++++++++++|
T Consensus 310 ~~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 310 VRLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred EEcccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 988752 457888888887799999999999999999999 77999999999986
No 62
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=337.46 Aligned_cols=347 Identities=20% Similarity=0.209 Sum_probs=270.4
Q ss_pred cccCCCCCCCCCCCCCCC--cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLSD--STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDV--YLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~ 84 (387)
..++++.|.|. .+++.. .+.+.+++.+.........|++..|.++||+++++|+.+..+..+++++| ++|+|+++
T Consensus 27 ~~i~l~~g~~~-~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 27 DKVNLGVGVYK-DEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred CcEecceeeEE-CCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 46788888652 223333 48899999888765445579999999999999999997655544578877 99999999
Q ss_pred HHHHHHHhh--cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCC
Q 038416 85 AIEISLSVL--ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGN 159 (387)
Q Consensus 85 a~~~~~~~l--~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~n 159 (387)
|+..+++++ +++||+|++++|+|+.+...++ ..|.+++.+++...+++++|++.++++++ ++++++++++|||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~--~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~N 183 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE--AAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHN 183 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHH--HcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 999998776 4899999999999999999999 99999999997444457899999998875 3356667799999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC-CCCccccccCC-CccEEEEecCcccccccccceEEEEe--e
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS-TPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVT--S 235 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~--~ 235 (387)
|||.++|.+++++|+++|++|++++|+||+|.++.++. ....++..+.. .+++++++||||.|+++|+|+||+++ +
T Consensus 184 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~ 263 (396)
T PRK09257 184 PTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAE 263 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeC
Confidence 99999999999999999999999999999999987642 22333333332 35799999999999999999999984 2
Q ss_pred CCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCCC
Q 038416 236 DPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP---CITC 306 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~ 306 (387)
++.... .+..++..... ....++.+.|.++..++.+.. +.++++..+.++++++.+.+.|+++. ++.
T Consensus 264 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~- 339 (396)
T PRK09257 264 DAEEAD---RVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFD- 339 (396)
T ss_pred CHHHHH---HHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-
Confidence 211000 23333333322 334567888999988887642 35677788999999999999999862 355
Q ss_pred CCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHHH
Q 038416 307 PVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAFC 380 (387)
Q Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~~ 380 (387)
+..|.+|+|+|++++ .+++.++++++||.+.|. + ||+++ .+++++++++++|++++
T Consensus 340 ~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 340 FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 447899999998774 246677888999999883 2 99996 79999999999998753
No 63
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.7e-44 Score=331.74 Aligned_cols=331 Identities=18% Similarity=0.246 Sum_probs=269.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+..++++.+.+ ++++++.+++++.+.+... ..|+. .|..+||+.+++++ ++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~nen----~~~~~~~v~~a~~~~~~~~--~~Yp~-~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i~ 95 (366)
T PRK01533 29 HSFVKLASNEN----PFGCSPRVLDELQKSWLDH--ALYPD-GGATTLRQTIANKL------HVKMEQVLCGSGLDEVIQ 95 (366)
T ss_pred CceEEeCCCCC----CCCCCHHHHHHHHHHHHhc--CcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHHH
Confidence 34556666555 7999999999999876542 35764 68899999999998 578999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|..|...+. ..|.+++.++++ ++.+|+++++++++++++++++++||||||.+++.
T Consensus 96 ~~~~~l~~~gd~vlv~~P~y~~~~~~~~--~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~ 170 (366)
T PRK01533 96 IISRAVLKAGDNIVTAGATFPQYRHHAI--IEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVND 170 (366)
T ss_pred HHHHHhcCCCCEEEEcCCcHHHHHHHHH--HcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCH
Confidence 9999999999999999999999999999 999999999873 34689999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|++++ ++|+||+|.++.+.+.....+..+...+++++++||||.|+++|+|+||+++++ +++
T Consensus 171 ~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~ 241 (366)
T PRK01533 171 RKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELI 241 (366)
T ss_pred HHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHH
Confidence 99999999998866 577899999877654222223334445689999999999999999999999865 788
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+... ..+.+.++|.++..+|++ ..+.++..+...++++.+.+.++.+ ++. + .+..|+|+|++++
T Consensus 242 ~~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~------ 309 (366)
T PRK01533 242 EKLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE------ 309 (366)
T ss_pred HHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC------
Confidence 88877653 467899999999999974 5677777888888888888888877 676 4 3456889999875
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+..++...+ .++||.|.+ | ++++||+++.. ++.+.+++.|+++++....|
T Consensus 310 --~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 310 --NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred --CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhcccc
Confidence 245666666 567999997 3 58899998653 66777888887777665543
No 64
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-43 Score=326.96 Aligned_cols=337 Identities=20% Similarity=0.311 Sum_probs=277.4
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.+++++.+.+++.+++.......|++..|..++|+.+++++ ++++++|++|+|+++++..++.+++++||+|++
T Consensus 39 ~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~ 112 (380)
T PRK06225 39 HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESLYLVMRAFLSPGDNAVT 112 (380)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Confidence 67899999999999988655567888889999999999998 467889999999999999999999999999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCC-CCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLP-EKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
++|+|..+...+. ..|.+++.+++.. ++++.+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++|
T Consensus 113 ~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~ 190 (380)
T PRK06225 113 PDPGYLIIDNFAS--RFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDND 190 (380)
T ss_pred cCCCCcchHHHHH--HhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence 9999998888888 8999999998743 345789999999999888999999999999999999999999999999999
Q ss_pred cEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcc
Q 038416 182 IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV 261 (387)
Q Consensus 182 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (387)
+++|+|++|.+|..+. .+...+. .++++++.||||.|+++|+|+||+++++ ++++.++.......+.+
T Consensus 191 ~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l~~~~~~~~~~~~~~~ 258 (380)
T PRK06225 191 AFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DLIEVVKSIVINDLGTN 258 (380)
T ss_pred cEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HHHHHHHHHHhcccCCC
Confidence 9999999998765322 1222222 2578999999999999999999999975 67877776543345667
Q ss_pred hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHh
Q 038416 262 TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKE 341 (387)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (387)
.+++.++...+.. ...++++..+.++++++.+.+.|++++++.+...|.+|+|+|+.++... .+..++...+. +
T Consensus 259 ~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~l~~~l~-~ 332 (380)
T PRK06225 259 VIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG----IDPEDLVEYLL-E 332 (380)
T ss_pred HHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc----CCHHHHHHHHH-H
Confidence 7888888777764 3456667777777888888899988766543335677889999886421 14567777775 6
Q ss_pred cCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 342 ESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 342 ~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+||.+.||..|.. .+++|++++.+++++++++++|+++++..|.
T Consensus 333 ~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 333 RKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 7999999876543 4689999998899999999999999988774
No 65
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-44 Score=328.09 Aligned_cols=326 Identities=19% Similarity=0.304 Sum_probs=269.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ ++++++.+.+++.+.... ...|+. .+..+||+++++++ ++++++|++|+|+++++..
T Consensus 31 ~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 31 DLVKLSSNEN----PHGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGALDY 97 (357)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 3566667655 788899999999887653 457875 68899999999998 5789999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++++++++||.|++++|+|..+..... ..|.++..+++..++++.++++++++.. ++++++++++||||||.++|.+
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~--~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSAR--YHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHH--HcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999998888888 8899999998876667788888887765 3688999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|++ +++||+||+|.++.+.+. .+......+++++++||||.|+++|+|+||+++++ ++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence 99999999975 789999999999875431 22223345689999999999999999999999976 6888
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+.+... ....+.+.+.++..++.+ +.++++..+.++++++.+.+.|+.. . .|.+|+|+|++++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~------- 306 (357)
T PRK14809 243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG------- 306 (357)
T ss_pred HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence 8876543 456778888888888864 5778888888888888888888643 2 3567889998874
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+ +++||.+.||..|+.++++||+++. .+++++++++|+++++
T Consensus 307 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 345676665 6779999999999878999999874 6899999999998875
No 66
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.9e-43 Score=326.27 Aligned_cols=329 Identities=21% Similarity=0.326 Sum_probs=267.5
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~a~ 86 (387)
+..++++.|+| +.+.++.+.+++.+.... .+|++..|..++|+.+++|+.+.+++. +++++|++|+|+++++
T Consensus 27 ~~~i~l~~~~p----~~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i 99 (364)
T PRK07865 27 DGIVDLSVGTP----VDPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred CCEEEcCCCCC----CCCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence 34567777766 567788999998876532 379888899999999999999888876 8899999999999999
Q ss_pred HHHHHhh-cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 87 EISLSVL-ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 87 ~~~~~~l-~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
..++..+ +++||.|+++.|+|..+...++ ..|.++..++. +++++ .++++++++++|+||||.++
T Consensus 100 ~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~---------~~~l~---~~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 100 AWLPTLLGLGPGDVVVIPELAYPTYEVGAR--LAGATVVRADS---------LTELG---PQRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHcCCCCCEEEECCCCcccHHHHHH--hcCCEEEecCC---------hhhCC---cccceEEEEcCCCCCCCccC
Confidence 9988888 7999999999999999999999 89998887641 22222 25789999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc---CCCccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF---GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
+.+++++|+++|+++|+++|+||+|.++.+++.....+... ...+++++++||||.|+++|+|+||+++++
T Consensus 166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------ 239 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ 239 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH------
Confidence 99999999999999999999999999988765322222110 123579999999999999999999999865
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++++.++.... .....+.+.|.++..++.+ +.++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|+.++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~ 313 (364)
T PRK07865 240 --ALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFR-VDHSEAGLYLWATRG 313 (364)
T ss_pred --HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCccEEEEEeCC
Confidence 78888876543 3456788899998888875 5667788889999999999999987 677 447888999998874
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
. +..++... +.++||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 314 ~-------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 314 E-------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred C-------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 2 34455554 4678999999988763 57999999878999999999885
No 67
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=326.69 Aligned_cols=336 Identities=18% Similarity=0.281 Sum_probs=266.8
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHHHHHhhcC--CCCCCCCCEEEcCChHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH-YNCYSPTLGVPSARRGIADYLNRDL--PYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~lr~~ia~~~~~~~--~~~~~~~~i~~~~g~~~a~ 86 (387)
..+...|.+ ++++|+.+.+++.+.+.... ...|+. .|..+||+++++|+++.+ +..+++++|++|+|+++++
T Consensus 30 ~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 30 LDRLDTNEF----PYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred eeEecCCCC----CCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 344555444 78999999999999876532 346865 689999999999998766 4568899999999999999
Q ss_pred HHHHHhhcCCCC-eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEeCCCCCc
Q 038416 87 EISLSVLARPGA-NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVIINPGNPC 161 (387)
Q Consensus 87 ~~~~~~l~~~g~-~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~npt 161 (387)
..++.+++.+|| +|+++.|+|..+...++ ..|.+++.++++ ++++++|+++++++++ ++++++++++|||||
T Consensus 105 ~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~--~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPT 181 (374)
T PRK02610 105 RSLLIATCLGGEGSILVAEPTFSMYGILAQ--TLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPT 181 (374)
T ss_pred HHHHHHHcCCCCCeEEEcCCChHHHHHHHH--HcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCC
Confidence 988888777785 89999999999999999 999999999875 3458899999999886 478999999999999
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
|..++.+++++++++| ++++||+||+|.+|.+. . .+..+....++++++||||.|+++|+|+||+++++
T Consensus 182 G~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~----- 250 (374)
T PRK02610 182 GNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP----- 250 (374)
T ss_pred CCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecCH-----
Confidence 9999999999999887 38999999999987532 1 12223334568899999999999999999999865
Q ss_pred cchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 242 QNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++++.+.+... ..+.+.+.|.++..++++ .+.+.+...+. .+.++.+.+.|+.++++. + .|.+|+|+|++++
T Consensus 251 ---~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~ 322 (374)
T PRK02610 251 ---ELIAVLEKVRL-PYNLPSFSQLAAQLALEH-RQELLAAIPEI-LQERDRLYQALQELPQLR-V-WPSAANFLYLRLS 322 (374)
T ss_pred ---HHHHHHHHhcC-CCCCCHHHHHHHHHHhcC-HHHHHHHHHHH-HHHHHHHHHHHHhCCCcE-e-CCCcceEEEEeCC
Confidence 68888877653 355678899998888874 34444444444 445677888888887776 4 5888999999986
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.. .+..++...+ .++||.+.++ .+++||+++. .+++++++++|+++++++.
T Consensus 323 ~~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~-~~~~~~~l~~l~~~l~~~~ 373 (374)
T PRK02610 323 QD-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGT-PEENQRTLERLQAALTQLE 373 (374)
T ss_pred CC-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCC-HHHHHHHHHHHHHHHhhcC
Confidence 42 1455666665 6779999764 4789999985 4668999999999887653
No 68
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9e-44 Score=328.17 Aligned_cols=329 Identities=20% Similarity=0.273 Sum_probs=270.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.+.+ .+++++.+.+++.+.+.. . .|.+..+..++|+++++++ ++++++|++|+|+++++..
T Consensus 30 ~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l~~ 96 (359)
T PRK03158 30 KIVKLASNEN----PYGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVIQM 96 (359)
T ss_pred ceEEecCCCC----CCCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHHHH
Confidence 3445555444 577899999999988764 2 3444468899999999999 4678999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++++++++||+|+++.|+|+.+...+. ..|.++..+++. ++.+|++++++.++++++++++++|+||||.++|.+
T Consensus 97 ~~~~~~~~gd~v~~~~p~y~~~~~~~~--~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 97 ISRALLNPGTNTVMAEPTFSQYRHNAI--IEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHhCCCCEEEEcCCCHHHHHHHHH--HcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999998888 899999999885 357899999998888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++.++++.|+ +|+++|+||+|.++.+.+.....+...+..+++++++||||.|+++|+|+||+++++ ++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence 9999998874 699999999999988765333333333444679999999999999999999999875 7888
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+..... ....+.++|.++..++++ ..++++..+.++++++.+.+.|+++ ++. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------ 310 (359)
T PRK03158 243 KLNIARP-PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------ 310 (359)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence 8877654 356788999999999874 4667777788888888998999887 666 4 46668899988752
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+..++...++ ++||.+.||..|+.++++||+++ ++++.+.+++.|+++
T Consensus 311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 4567777775 56999999999987889999987 567788888887664
No 69
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.6e-43 Score=328.54 Aligned_cols=359 Identities=18% Similarity=0.247 Sum_probs=266.7
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHH-HHHhhcCCCCC-CCC--CEEEcCChHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIA-DYLNRDLPYKL-SPE--DVYLTLGCSQA 85 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia-~~~~~~~~~~~-~~~--~i~~~~g~~~a 85 (387)
.++.+.|+| ++++++.+ +++.+.+... +|+.+.+..+++++++ +|+.+.++... .++ +|++|+|+++|
T Consensus 96 ~i~l~~g~p----~~~~~~~~-~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~a 167 (521)
T TIGR03801 96 IISYVIDQL----GFDPDAFL-YEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAA 167 (521)
T ss_pred HHhhcCCCC----CCCCCHHH-HHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHH
Confidence 456777777 78866555 5555554332 5876667777777777 57666554332 333 89999999999
Q ss_pred HHHHHHh-----hcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCC-----ccCChhhHHHhhccCceEEEEe
Q 038416 86 IEISLSV-----LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKR-----WEVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 86 ~~~~~~~-----l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~v~l~ 155 (387)
+..++.+ ++++||+|+++.|+|+.|...+.....|.+++.++..++++ |.+|++++++++++++++++++
T Consensus 168 l~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~ 247 (521)
T TIGR03801 168 MCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVV 247 (521)
T ss_pred HHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEe
Confidence 9999887 68999999999999999998877113467777777754433 8899999999888899999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhc--CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNL--GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
+|+||||.+++.+++++|+++|+++ +++||+||+|..|.+ .+.++... ..++++++.||||.|+++|+|+||++
T Consensus 248 nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~ 323 (521)
T TIGR03801 248 NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIA 323 (521)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh-CCCCEEEEEcchhhccCchhhhhhhh
Confidence 9999999999999999999999986 899999999998764 22333333 23589999999999999999999999
Q ss_pred eeCCCCcc-----------------------cch---hHHHHH----Hhhh-hccCCcchHHHH-----HHHHHhhhccH
Q 038416 234 TSDPNGIL-----------------------QNS---GFVDSI----KGCL-NAASHPVTFIQA-----AVPRIVDETNE 277 (387)
Q Consensus 234 ~~~~~~~~-----------------------~~~---~~~~~~----~~~~-~~~~~~~~~~~~-----~~~~~l~~~~~ 277 (387)
+++.. ++ .+| .+++++ ++.. +.+.+.+.+.|. ++.+++. ..+
T Consensus 324 ~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~-~~~ 401 (521)
T TIGR03801 324 LHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD-KEN 401 (521)
T ss_pred cCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc-cch
Confidence 87521 00 000 012222 2221 244556677766 2334443 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc-----------CCCcHHHHHHHHHHhcCeEE
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE-----------DIGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~ll~~~gi~v 346 (387)
.+.++..+.++++++.+.+.| .+ .+. ...|.+++|+|++++..... ...++.+++.+|+++.||.+
T Consensus 402 ~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v 478 (521)
T TIGR03801 402 AYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVL 478 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEE
Confidence 788888999999999988887 22 122 23688899999998742110 01146789999999999999
Q ss_pred EcCCccCC-CCeEEEEee-CChHhHHHHHHHHHHHHHHhhh
Q 038416 347 LPGRTVGM-KNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 347 ~~g~~~~~-~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.||..|+. .+++|||++ .+++++.++.++|++.++++..
T Consensus 479 ~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 479 LPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred eCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999986 457999997 5889999999999999987654
No 70
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-43 Score=329.54 Aligned_cols=344 Identities=17% Similarity=0.190 Sum_probs=263.5
Q ss_pred cccCCCCCCCC-CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE--EcCChHHH
Q 038416 9 TRHSPWPRRPL-GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVY--LTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~--~~~g~~~a 85 (387)
..++.+.|.|. ..++....+.+.+++.+........+|++..|.++||+++++|+....+..+++++|+ .|.|++++
T Consensus 30 ~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~a 109 (404)
T PTZ00376 30 SKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGA 109 (404)
T ss_pred ccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchH
Confidence 45788888741 1111122334444444433333446899999999999999999976554556888998 48899999
Q ss_pred HHHHHH---hhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCC
Q 038416 86 IEISLS---VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGN 159 (387)
Q Consensus 86 ~~~~~~---~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~n 159 (387)
+..++. +++++||+|++++|+|+.|...++ ..|.+++.+++.+++++++|++.+++++. ++++++++++|||
T Consensus 110 l~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~--~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N 187 (404)
T PTZ00376 110 LRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFK--SAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN 187 (404)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH--HcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 988875 567999999999999999999999 99999999998555568999999999884 3467778899999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC--CCccccccC-CCccEEEEecCcccccccccceEEEE---
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST--PYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLV--- 233 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~--- 233 (387)
|||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+. ..+++++++||||.|+++|+|+||++
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~ 267 (404)
T PTZ00376 188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC 267 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence 999999999999999999999999999999999887541 122232222 22479999999999999999999984
Q ss_pred eeCCCCcccchhHHHHH----Hhhhh-ccCCcchHHHHHHHHHhhhcc--H---HHHHHHHHHHHHHHHHHHHHhhcCC-
Q 038416 234 TSDPNGILQNSGFVDSI----KGCLN-AASHPVTFIQAAVPRIVDETN--E---AFFAKIIGLLKETADICYERIKEIP- 302 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~--~---~~~~~~~~~~~~~~~~~~~~l~~~~- 302 (387)
+++ ++++.+ .+... ...+++.+.|.++..++++.. + ..+.+..++++++++.+.+.|++++
T Consensus 268 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 339 (404)
T PTZ00376 268 ANK--------EEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGS 339 (404)
T ss_pred CCH--------HHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 332 444433 33222 234456789999999887632 2 2355666788999999999999862
Q ss_pred --CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHH
Q 038416 303 --CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAF 379 (387)
Q Consensus 303 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~ 379 (387)
++. ...|.+|+|+|++++ .+++..|++++||.+.||. ||+++ .+++++++++++|+++
T Consensus 340 ~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~~ 400 (404)
T PTZ00376 340 PGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHDV 400 (404)
T ss_pred CCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHHH
Confidence 244 336899999998764 3678888888899999971 99996 8999999999999988
Q ss_pred HH
Q 038416 380 CQ 381 (387)
Q Consensus 380 ~~ 381 (387)
+.
T Consensus 401 ~~ 402 (404)
T PTZ00376 401 VR 402 (404)
T ss_pred Hh
Confidence 65
No 71
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=4.8e-43 Score=347.43 Aligned_cols=352 Identities=15% Similarity=0.233 Sum_probs=280.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
.+++.+.|.+ ++++|+.+.+++.+.+... .+ ..+++++|+++++|+.+++|...++ ++|++++|+++++.
T Consensus 698 ~vI~LsinE~----d~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~ 768 (1082)
T PLN02672 698 SLIHMDVDES----FLPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFN 768 (1082)
T ss_pred CEEEEeCCCC----CCCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHH
Confidence 4566667666 8999999999999887542 22 2356788999999999988877754 58999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCC-CCccccC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPG-NPCGNVF 165 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~-nptG~~~ 165 (387)
.++.+++++||.|+++.|+|+.|...++ ..|.+++.+++.++++|.+|++.+++++++ +++.+++++|+ ||||.++
T Consensus 769 lll~aLl~pGD~VLVp~PtY~~Y~~~a~--~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~ 846 (1082)
T PLN02672 769 KLVLCCVQEGGTLCFPAGSNGTYVSAAK--FLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLY 846 (1082)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHH--HcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccC
Confidence 9999999999999999999999999999 999999999997667899999999999876 45689999997 9999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCC--cccc----ccCC---CccEEEEecCcccccccccceEEEEeeC
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY--VPMG----VFGS---IVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~--~~~~----~~~~---~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+.+++++|+++|++||++||+||+|+++.|.+... .++. .++. ..++++++||||.|+++|+|+||+++++
T Consensus 847 S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~ 926 (1082)
T PLN02672 847 SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND 926 (1082)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC
Confidence 99999999999999999999999999988876431 1111 1211 2378999999999999999999999865
Q ss_pred CCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhh---h-cc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVD---E-TN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~-~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+++++.+..... ...+....+.++..++. . .. ..++.+..+.++++++++.+.|+++ ++. +..|
T Consensus 927 -------~eLi~~l~~~~~-~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~~P 996 (1082)
T PLN02672 927 -------SVLIDAFHSAPG-LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VLEP 996 (1082)
T ss_pred -------HHHHHHHHHhhh-hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-EecC
Confidence 247888876533 12223334444444332 1 11 3456777888999999999999998 787 5589
Q ss_pred CceEEEEEecCccc-------ccC-----CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSM-------LED-----IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 311 ~~g~~~~~~~~~~~-------~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
++|+++|++++... .++ ..++.++...++++.||.+.||..|+.++++||+++.+++++++++++|++
T Consensus 997 eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~k 1076 (1082)
T PLN02672 997 QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIAR 1076 (1082)
T ss_pred CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 99999999764210 000 124678888898888999999998888899999999999999999999988
Q ss_pred HHH
Q 038416 379 FCQ 381 (387)
Q Consensus 379 ~~~ 381 (387)
.+.
T Consensus 1077 f~~ 1079 (1082)
T PLN02672 1077 FKE 1079 (1082)
T ss_pred HHH
Confidence 654
No 72
>PLN02368 alanine transaminase
Probab=100.00 E-value=9.3e-44 Score=328.96 Aligned_cols=289 Identities=23% Similarity=0.400 Sum_probs=240.2
Q ss_pred CcHHHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALR-TAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~-~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~~vl~~ 103 (387)
+++.+.++++.... .....+|++..|..+||++|++|+.+++|..+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~ 161 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVP 161 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEe
Confidence 66777777655332 2235689998999999999999999888888899999999999999999999987 799999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
.|+|+.|...+. ..|.+++.+++..+++|.+|++++++++++ +++++++++||||||.+++.+++++|+++|
T Consensus 162 ~P~Y~~y~~~~~--~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a 239 (407)
T PLN02368 162 VPQYPLYSATIS--LLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFC 239 (407)
T ss_pred CCCCccHHHHHH--HcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 999999999999 999999999988777899999999998864 688999999999999999999999999999
Q ss_pred HhcCcEEeecccccccccCCC-CCccccc----cC----CCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHH
Q 038416 178 RNLGIIVIADEVYNHLAFGST-PYVPMGV----FG----SIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~-~~~~~~~----~~----~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++||++||+||+|.++.|++. .+.++.. +. ..+++++++||||.| +++|+|+||+++.+. +++++
T Consensus 240 ~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li 314 (407)
T PLN02368 240 YQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTV 314 (407)
T ss_pred HHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHH
Confidence 999999999999999998764 3334322 21 234899999999998 799999999995210 12688
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhcc------HHHH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEE
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETN------EAFF---AKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~ 318 (387)
+.+.+......+++.++|.++..++.... +.+. .+..+.++++++.+.+.|++++++.+. .|++++|+|+
T Consensus 315 ~~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~ 393 (407)
T PLN02368 315 EEIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFP 393 (407)
T ss_pred HHHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC-CCCeeeEecc
Confidence 88877644456788899999999987431 1233 456788999999999999999898844 8999999998
Q ss_pred ecCc
Q 038416 319 KLNV 322 (387)
Q Consensus 319 ~~~~ 322 (387)
+++.
T Consensus 394 ~i~l 397 (407)
T PLN02368 394 QIKL 397 (407)
T ss_pred CCCC
Confidence 7764
No 73
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-42 Score=319.07 Aligned_cols=330 Identities=21% Similarity=0.311 Sum_probs=264.6
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
..+++.+.+ .++.|+.+.+++.+.+.. ..+|++. +..+||+.+++|+ ++++++|++|+|+++++..+
T Consensus 21 ~~~l~~~~~----~~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~~~ 87 (354)
T PRK06358 21 ILDFSANIN----PLGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIFNI 87 (354)
T ss_pred eEEecCCCC----CCCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHHHH
Confidence 455656544 467789999999988753 4578764 6789999999998 57899999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+.++ .+ ++|+++.|+|+.|...++ ..|.++..+++..++++.+| +++++.+.++++++++++||||||.+++.++
T Consensus 88 ~~~~-~~-~~v~i~~P~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 162 (354)
T PRK06358 88 VKVT-KP-KKVLILAPTFAEYERALK--AFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE 162 (354)
T ss_pred HHHh-CC-CcEEEecCChHHHHHHHH--HcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence 9987 34 689999999999999999 99999999998766677888 6666666667899999999999999999999
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|+++|+++++++|+||+|.++.+++.....+..++..+++++++||||.|+++|+|+||+++++ +.+++.
T Consensus 163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~~ 235 (354)
T PRK06358 163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAEK 235 (354)
T ss_pred HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence 9999999999999999999999998776433334445555789999999999999999999999853 246777
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
+..... ..+.+.+.|.++..++++ ..++++..+.++++++.+.+.|++++++. +..|. |.|+|++++.
T Consensus 236 ~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~~------- 303 (354)
T PRK06358 236 LLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLEK------- 303 (354)
T ss_pred HHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcCc-------
Confidence 776544 456788889999888864 45678888899999999999999887776 43554 5689988863
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
..++...++ ++||.+.||..|+. ++++||+++.+ ++.+++++.|.+.
T Consensus 304 -~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~ 352 (354)
T PRK06358 304 -PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVI 352 (354)
T ss_pred -hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHH
Confidence 457777775 56999999998853 47899998653 4444455555443
No 74
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.9e-42 Score=318.51 Aligned_cols=327 Identities=22% Similarity=0.322 Sum_probs=266.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~a~~ 87 (387)
..++.+.|+| +++.++.+.+++++... ...|++..|..+||+++++++.++++.. +++++|++|+|+++++.
T Consensus 22 ~~i~l~~~~p----~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~ 94 (357)
T TIGR03539 22 GIVDLSVGTP----VDPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA 94 (357)
T ss_pred CeEEccCCCC----CCCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHH
Confidence 3466667766 67788999999987654 3479988899999999999999888876 89999999999999999
Q ss_pred HHHHhh-cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 88 ISLSVL-ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 88 ~~~~~l-~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
.++..+ .++||.|++++|+|..+...+. ..|.+++.++ +++.+. .++++++++++|+||||.+++
T Consensus 95 ~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~~~ 160 (357)
T TIGR03539 95 WLPTLLGLGPGDTVVIPELAYPTYEVGAL--LAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRVLS 160 (357)
T ss_pred HHHHHHcCCCCCEEEECCCCcHHHHHHHH--hcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCccCC
Confidence 999888 7999999999999999998888 8898887663 222222 247899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc---CCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF---GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
.+++++|.++|+++|+++|+||+|.++.+.+.....+... ...+++++++||||.|+++|+|+||+++++
T Consensus 161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~------- 233 (357)
T TIGR03539 161 VDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP------- 233 (357)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-------
Confidence 9999999999999999999999999888765432222110 112478999999999999999999999865
Q ss_pred hhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 244 SGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
++++.+.+... ....++.+.|.++..++++ +.++.+..+.++++++.+.+.|++. ++. +..|.+|+|+|++++.
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~~~~~~ 308 (357)
T TIGR03539 234 -ALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLWATRGE 308 (357)
T ss_pred -HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEEEECCC
Confidence 68887776543 3456788899998888864 4667778888899999999999887 677 4478899999998752
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
+..++...+ .++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 309 -------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 309 -------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred -------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 344566554 678999999987754 5799999988889999999876
No 75
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.8e-42 Score=322.08 Aligned_cols=355 Identities=19% Similarity=0.279 Sum_probs=267.5
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTA----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
+..++++.|+|. ..+ +.+.+.+++++.+... ....|++..|..+||++|++|+.+.++.++++++|++|+|+
T Consensus 30 ~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga 106 (416)
T PRK09440 30 PGAIMLGGGNPA---HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGS 106 (416)
T ss_pred CCceeccCCCCC---ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCh
Confidence 345777788772 122 3457778888776542 23579998999999999999999888888999999999999
Q ss_pred HHHHHHHHHhhcC-----CCCeEEE-cCCCCcchHHHhhccCCC----ceeeeeccCCCC-CccCChhhHHHhhccCceE
Q 038416 83 SQAIEISLSVLAR-----PGANILI-PRPGYPLYEIHAAGSNNN----LEARHYDLLPEK-RWEVDLDGVEALADENTVA 151 (387)
Q Consensus 83 ~~a~~~~~~~l~~-----~g~~vl~-~~p~~~~~~~~~~~~~~g----~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~ 151 (387)
++++..++.++++ +||.|++ +.|+|+.|...+. ..+ .....+++..+. ++.+|+++++ +.+++++
T Consensus 107 ~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~ 182 (416)
T PRK09440 107 QSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGL--EEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGA 182 (416)
T ss_pred HHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhh--ccCceeecccccccccccccccCCCHHHcc--cCCCceE
Confidence 9999999999984 5899999 7999999887554 333 222223332211 4678999887 4567899
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
+++++||||||++++.+++++|+++|++++++||+||+|..+... ........ ...+++++++||||. +++|+|+||
T Consensus 183 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~ 259 (416)
T PRK09440 183 ICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-IIFSEATP-LWNPNIILCMSLSKL-GLPGVRCGI 259 (416)
T ss_pred EEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-cchhhcCc-cccCCeEEEeccccc-CCCcceEEE
Confidence 999999999999999999999999999999999999999753211 00111111 114679999999997 999999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccH-HHHHH-HHHHHHHHHHHHHHHhhc-CCC--CC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNE-AFFAK-IIGLLKETADICYERIKE-IPC--IT 305 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~-~~~--~~ 305 (387)
+++++ ++++.+..... ...+++.+.|.++..++++... .+..+ ..+.++++++.+.+.|++ +++ +.
T Consensus 260 ~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~ 331 (416)
T PRK09440 260 VIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCL 331 (416)
T ss_pred EeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeE
Confidence 99875 68888877654 3456788999999999986432 22223 456677777778777765 333 33
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---------CCeEEEEeeCChHhHHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---------KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
+..|.+|+|+|++++... .++.++...+ .++||.+.||..|.. .+++||+++.+.+++++++++|
T Consensus 332 -~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l 405 (416)
T PRK09440 332 -IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAIL 405 (416)
T ss_pred -EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHH
Confidence 347889999999987421 1455666655 678999999988743 2589999987899999999999
Q ss_pred HHHHHHhhhc
Q 038416 377 KAFCQRHAKK 386 (387)
Q Consensus 377 ~~~~~~~~~~ 386 (387)
++++++.+..
T Consensus 406 ~~~~~~~~~~ 415 (416)
T PRK09440 406 AEEVEKAYAE 415 (416)
T ss_pred HHHHHHHhhc
Confidence 9999876543
No 76
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.3e-42 Score=316.62 Aligned_cols=325 Identities=17% Similarity=0.240 Sum_probs=256.8
Q ss_pred cCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHH
Q 038416 11 HSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISL 90 (387)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 90 (387)
++++.+.+ .+++|+.+.+++++.+.. ...|++. +..+||+++|+++ ++++++|++|+|+++++..++
T Consensus 25 i~l~~~~n----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i~~~~ 91 (360)
T PRK07392 25 LDFSASIN----PLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELLTWAG 91 (360)
T ss_pred EEeCCcCC----CCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHH
Confidence 44545433 588999999999887764 4578875 4689999999999 578899999999999999999
Q ss_pred HhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCc---cCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 91 SVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRW---EVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 91 ~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++. +||.|+++.|+|..+...++ ..|.+++.++++.++++ ..+++++++.. ++++++++++||||||.+++.
T Consensus 92 ~~l~-~g~~vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~ 167 (360)
T PRK07392 92 RELA-QLRAVYLITPAFGDYRRALR--AFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSR 167 (360)
T ss_pred HHhC-CCCeEEEECCCcHHHHHHHH--HcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCH
Confidence 9875 68899999999999999999 99999999998755543 34566666543 468899999999999999996
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++.+ +++++++ +|+||+|.+|.+++.....+..+...+++++++||||.|+++|+|+||+++++ +++
T Consensus 168 ~~l~~---l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--------~~~ 235 (360)
T PRK07392 168 EAILP---LLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--------DRL 235 (360)
T ss_pred HHHHH---HHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------HHH
Confidence 65555 4557775 66799999988765322222334445689999999999999999999999975 677
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+... ..+.+.+.|.++..++++ ..+.++..+.++++++.+.+.|+.++++. + .|.+++|+|++++.
T Consensus 236 ~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~----- 305 (360)
T PRK07392 236 QRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG----- 305 (360)
T ss_pred HHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC-----
Confidence 77765543 457888999999999875 45666677788889999999999888877 4 45778999988763
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCC--hHhHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAE--PATLEDGLERI 376 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~--~e~~~~~~~~l 376 (387)
++.++...+++++||.+.||..|+. ++++||+++.. .+++.++++++
T Consensus 306 --~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 --SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred --CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 4567877877888999999998864 47999999774 35666666654
No 77
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-42 Score=318.53 Aligned_cols=329 Identities=20% Similarity=0.295 Sum_probs=263.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ .+++++.+.+++.+.... ...|++..| .+||+.+++++ ++++++|++|+|+++++..
T Consensus 37 ~~i~l~~~~~----~~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l~~ 103 (371)
T PRK05166 37 RIAKLGSNEN----PLGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLIAV 103 (371)
T ss_pred ceEEcCCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHHHH
Confidence 4556666544 467888999999876543 457988777 58999999998 4678899999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+.+...++ ..|.++..++++. ++++|+++++++++++++++++++|+||||.+++.+
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~~~~~~--~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLHEDYPT--MMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHH--HcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999988989 9999999998753 457899999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|++ ++++|+||+|.++.+++.....+..+. ..+++++++||||.|+++|+|+||+++++ ++++
T Consensus 180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~ 251 (371)
T PRK05166 180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV 251 (371)
T ss_pred HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence 99999999875 889999999999885432222222222 23579999999999999999999988743 2577
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+... ....+.+.|.++..++.. .+++++..+.+.++++.+.+.|+++ ++. + .|.+|+|+|++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~----- 320 (371)
T PRK05166 252 GLLDRVRT-PFNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR----- 320 (371)
T ss_pred HHHHHhcc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence 77765543 456778888877777764 4678888888999999999999988 666 4 56678899998753
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCC--hHhHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAE--PATLEDGLERI 376 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~--~e~~~~~~~~l 376 (387)
++.++...++ ++||.+.||..++..+++||+++.. .+.+.++++.+
T Consensus 321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 4567777775 4699999998777789999999863 34555555544
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.7e-42 Score=315.19 Aligned_cols=330 Identities=21% Similarity=0.303 Sum_probs=260.5
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
.++.+.|.+ ++++|+.+++++.+.+... ..|+. .+..+||+.+++++ ++++++|++|+|+++++..+
T Consensus 22 ~i~l~~~~~----~~~~p~~~~~a~~~~~~~~--~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 22 LLDFSANIN----PLGMPVSLKRAIIDNLDCA--ERYPD-VEYRHLHQALARHH------QVPASWILAGNGETESIFAV 88 (356)
T ss_pred EEEeccccC----CCCCCHHHHHHHHHHHHhc--ccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHHHHHH
Confidence 455555544 6899999999999877642 46776 46899999999998 56889999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++++ .+|+ ++++.|+|..|...++ ..|.+++.+++++++++.+| +++++.+.++++++++++|+||||..++.++
T Consensus 89 ~~~l-~~g~-viv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~ 163 (356)
T PRK08056 89 VSGL-KPRR-AMIVTPGFAEYRRALQ--QVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQL 163 (356)
T ss_pred HHHh-CCCC-EEEeCCCcHHHHHHHH--HcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHH
Confidence 9987 5675 7778999999999999 99999999998766667776 4555666778999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|+++|+++++++|+|++|.++.+.+....+. +...+++++++|+||.|+++|+|+||+++++ +++++.
T Consensus 164 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~~ 234 (356)
T PRK08056 164 LQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVAR 234 (356)
T ss_pred HHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence 9999999999999999999999987654322221 2223578999999999999999999999853 146676
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
+.+... ..+++.+.+.++..++.. ..+..+..+.++++++.+.+.|+.++++. + .|.+++|+|++++.
T Consensus 235 l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------- 302 (356)
T PRK08056 235 MRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------- 302 (356)
T ss_pred HHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC-------
Confidence 765432 456677788888888753 46677778889999999999999887776 4 35568899998863
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+..++...++ ++||.+.+|..|.. .+++||+++. +++.+.+++.|++++
T Consensus 303 ~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 303 PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVL 353 (356)
T ss_pred ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHH
Confidence 3456777765 57999999998843 4699999974 455556666665554
No 79
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-42 Score=315.31 Aligned_cols=338 Identities=18% Similarity=0.248 Sum_probs=275.6
Q ss_pred cccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 5 KGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 5 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
+|++++++.+.|.+ ++++++.+.+++.+.... ..+|++. +..+||++||+++ ++++++|++|+|+++
T Consensus 29 ~g~~~~~~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~ 95 (369)
T PRK08153 29 RGRPFRARIGANES----GFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDG 95 (369)
T ss_pred cCCcceeEecCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHH
Confidence 67777778888766 899999999999987643 3468875 5789999999998 568899999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh-ccCceEEEEeCCCCCccc
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA-DENTVAIVIINPGNPCGN 163 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~ 163 (387)
++..++.+++++||.|+++.|+|+.+...+. ..|.++..+|++.+ .+|++++++.+ +.+++++++++|+||||.
T Consensus 96 ~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~--~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~ 170 (369)
T PRK08153 96 LLGLIVRLYVEPGDPVVTSLGAYPTFNYHVA--GFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGS 170 (369)
T ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHH--HcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCC
Confidence 9999999999999999999999999988888 89999999887432 57899988766 457899999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
++|.+++++++++|++ +++||+||+|..+.+.+. ..++.. ..+++++++||||.|+++|+|+||+++++
T Consensus 171 ~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~------- 239 (369)
T PRK08153 171 WHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP------- 239 (369)
T ss_pred CCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH-------
Confidence 9999999999998874 899999999999876542 222222 23579999999999999999999999975
Q ss_pred hhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 244 SGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+.+... .++.+++.|.++..++++ ..++++..+.++++++.+.+.|++. ++. + .|.+++|+|++++..
T Consensus 240 -~~~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~ 312 (369)
T PRK08153 240 -GTIKAFDKVRN-HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD 312 (369)
T ss_pred -HHHHHHHHhhc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC
Confidence 68887776654 356889999999999974 5678888899999999999999887 665 4 578899999887521
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEE-cCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIIL-PGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
. ....++..++. ++||.+. |+.. ...+++||+++ ++++++.+++.|.++++..++
T Consensus 313 ~----~~a~~l~~~l~-~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 313 G----AFARAVLDGLI-ARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred c----ccHHHHHHHHH-HCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 1 13456666664 5699995 6643 23579999998 678999999999999876654
No 80
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=315.09 Aligned_cols=333 Identities=19% Similarity=0.283 Sum_probs=265.6
Q ss_pred cCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 11 HSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
++.+.+.+ ++++++.+.+++.+.+... ....|++ .+..+||+.+++|+.+.++.++++++|++|+|+++++..
T Consensus 29 i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 29 VRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred eEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 44545444 7899999999999987532 3457875 578999999999999988888899999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~ 167 (387)
++.+++++||.|+++.|+|..+...+. ..|.+++.++. .+++++|+++++++++ ++++++++++|+||||.+++.
T Consensus 104 ~~~~~~~~gd~v~v~~P~y~~~~~~~~--~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 104 LLQAFGGPGRTALGFVPSYSMHPIIAR--GTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHH--hcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 999999999999999999999999998 88988887765 3467899999999886 467899999999999999998
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++| ++++|+||+|.+|.+.+.. ..+...+...++++++||||.|+++|+|+||+++++ +++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence 8888888877 6999999999998765532 222222333478999999999999999999999865 788
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+..... .+..+++.|.++..+++.. ..+.+..+++.++++.+.+.|+++ ++. +..+.+++++|..++
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------ 316 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------ 316 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence 88876543 4677888999988888752 334455667888888899999887 676 436777777765553
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
+..++...+ .++||.+.+. +.++++||+++ ++++++.+++.|+++++.
T Consensus 317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 345566655 5679999874 34689999987 457788888888887654
No 81
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=313.52 Aligned_cols=357 Identities=16% Similarity=0.221 Sum_probs=265.7
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC---CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC---CCCEEEcC
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT---AHYNCYSPTLGVPSARRGIADYLNRDLPYKLS---PEDVYLTL 80 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~---~~~i~~~~ 80 (387)
++.+.+.++|.-+... .+.+.+++++.... .....|++..|.++||+.+++++.+..+ ... .++|++|+
T Consensus 2 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~ 76 (388)
T PRK08637 2 KATKYNATIGMATEKG----GPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTN 76 (388)
T ss_pred CccceecceeeEecCC----CcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEcc
Confidence 3456677777552222 22444555554442 3456899999999999999999876543 222 36789999
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh-hccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEe
Q 038416 81 GCSQAIEISLSVLARPGANILIPRPGYPLYEIHA-AGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVII 155 (387)
Q Consensus 81 g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~ 155 (387)
|+++++..++.+++++||.|+++.|+|+.+...+ . ..|.+++.+++.. +++++|++++++.++ +.+++++++
T Consensus 77 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~--~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~ 153 (388)
T PRK08637 77 ALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNT--RRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILN 153 (388)
T ss_pred chHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH--hcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEe
Confidence 9999999999999999999999999999998765 4 4799999999842 234689999998876 456677888
Q ss_pred CCCCCccccCCHHHHHHHHHHHHh-----cCcEEeecccccccccCCCCCccc-ccc-CCCccE--EEEecCcccccccc
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARN-----LGIIVIADEVYNHLAFGSTPYVPM-GVF-GSIVPV--ITLGSISKRWIVPG 226 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~-----~~~~li~D~~~~~~~~~~~~~~~~-~~~-~~~~~~--~~i~s~sK~~~~~g 226 (387)
+||||||..++.+++++|+++|++ ++++||+||+|.++.+++....++ ..+ +..+++ ++++|+||.|+++|
T Consensus 154 ~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG 233 (388)
T PRK08637 154 FPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWG 233 (388)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcc
Confidence 999999999999999999998875 899999999999998877544332 222 223454 45569999999999
Q ss_pred cceEEEEeeCCCCcccchhHHHHHHhh----hh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 227 WRLGWLVTSDPNGILQNSGFVDSIKGC----LN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 227 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+|+||++++.+. -.++++.+.+.+. .. ....++.+.|.++..++++.. ...+.+....++++++.+.+.|+.
T Consensus 234 lRlG~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~ 311 (388)
T PRK08637 234 FRVGFITFGTKA--GSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYD 311 (388)
T ss_pred cceEEEEEcccc--CCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999975210 0012566666542 11 234678899999999997532 233445556677888888888866
Q ss_pred C---CCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHHHHHH
Q 038416 301 I---PCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDGLERI 376 (387)
Q Consensus 301 ~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~~~~l 376 (387)
. +++. +..|.+|+|+|++++. .++.+++..+++++||.+.+. .++++||+++. +.+++++++++|
T Consensus 312 ~~~~~~~~-~~~~~~g~~~~~~l~~------~~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l 380 (388)
T PRK08637 312 GKYDDAWQ-AYPFNSGYFMCLKLKG------VDAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSI 380 (388)
T ss_pred hCCCCCcc-cccccceEEEEecCCh------HHHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHH
Confidence 4 2566 4478899999998862 145678887777789988753 25789999965 789999999999
Q ss_pred HHHHHHhh
Q 038416 377 KAFCQRHA 384 (387)
Q Consensus 377 ~~~~~~~~ 384 (387)
.+++++++
T Consensus 381 ~~~~~~~~ 388 (388)
T PRK08637 381 YKAIKDLR 388 (388)
T ss_pred HHHHHhcC
Confidence 99998764
No 82
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=314.16 Aligned_cols=325 Identities=18% Similarity=0.274 Sum_probs=259.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.|.+ .+++++.+.+++.+.. ....|+. .+..+||+.+++++ ++++++|++|+|+++++..
T Consensus 53 ~~i~l~~n~~----p~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 53 DIVKLDANEN----PYGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELIDL 118 (380)
T ss_pred ceEEccCCCC----CCCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHHHH
Confidence 3445555443 5788888999886532 2345776 46799999999998 4688999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh-ccCceEEEEeCCCCCccccCCH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA-DENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~~~~~ 167 (387)
++.+++++||+|+++.|+|..|...++ ..|.++..++++ .++.+|++++++++ +++++++++++|+||||..++.
T Consensus 119 ~~~~~~~~gd~Vlv~~P~y~~y~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 119 LMRCVLDPGDKIIDCPPTFGMYVFDAA--VNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHH--HcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 999999999999999999999988888 899999999874 35788999999988 6789999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|++.+ +++|+||+|.+|.+.+. ....+...+++++++||||.|+++|+|+||+++++ +++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence 8888888753 89999999998875432 12223334679999999999999999999999865 788
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+... ....+.++|.++..+|++ ..++++..+.+.++++.+.+.|++++++. + .|.+++|+|++++..
T Consensus 260 ~~l~~~~~-~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~---- 330 (380)
T PLN03026 260 EYLWRAKQ-PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG---- 330 (380)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence 88876654 356788889998888875 46788888999999999999999885444 4 678899999987631
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.+..++...++ ++||.+.++..++..+++||+++. +++.+.+++.|++
T Consensus 331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 14567777775 679999998765567899999984 4455555555543
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-41 Score=305.79 Aligned_cols=320 Identities=20% Similarity=0.355 Sum_probs=271.0
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
+++|+.+.++++..+.. ...|++. ...+|+++++++++. .++++|++++|+.+.+..++++++.+||+|+++
T Consensus 34 ~gp~~~~~~~~~~~~~~--~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~ 105 (356)
T COG0079 34 YGPPPKVIEAIRAALDK--LNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELIELLVRAFVEPGDTVLIP 105 (356)
T ss_pred CCCCHHHHHHHHHHHHh--hccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHHHHHHHHhhcCCCEEEEc
Confidence 78889999999998873 4579885 789999999999941 678999999999999999999999999999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
.|+|.-|...++ ..|.+++.+++.+ |..|++.+.+++++++++|++||||||||..++.++++++++.+.+ +.+
T Consensus 106 ~Ptf~~Y~~~a~--~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~-~~~ 179 (356)
T COG0079 106 EPTFSMYEIAAQ--LAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPE-GGL 179 (356)
T ss_pred CCChHHHHHHHH--hcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcE
Confidence 999999999999 9999999999854 7899999999998899999999999999999999999999999988 999
Q ss_pred EeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchH
Q 038416 184 VIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTF 263 (387)
Q Consensus 184 li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (387)
||+||+|.+|.- ...+......+++++++||||+||++|+|+||++++. ++++.+.+.+. .++.+.+
T Consensus 180 vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i~~l~~vr~-p~~v~~~ 246 (356)
T COG0079 180 VVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELIAALNKVRP-PFNVSSP 246 (356)
T ss_pred EEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHHHHHHHhcC-CCCCCHH
Confidence 999999999763 2222212244679999999999999999999998865 89999998875 5778899
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcC
Q 038416 264 IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEES 343 (387)
Q Consensus 264 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (387)
++.++.+++.+ ++++++..+.+...++++.+.|+.++ +..+ .|+.++|++++++. .....+...| .++|
T Consensus 247 a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~------~~~~~l~~~L-~~~g 315 (356)
T COG0079 247 ALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPD------AEAAALAEAL-LKKG 315 (356)
T ss_pred HHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCC------ccHHHHHHHH-HHCC
Confidence 99999998886 48899999999999999999999985 4424 67789999999874 1223455555 5569
Q ss_pred eEEEcCCc-cCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 344 VIILPGRT-VGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 344 i~v~~g~~-~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
|.++.... ...++|+||++++.+|. +++++.|.++++.
T Consensus 316 iivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 316 ILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred EEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 99998754 23467999999987777 8888888877654
No 84
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.7e-41 Score=312.71 Aligned_cols=332 Identities=20% Similarity=0.275 Sum_probs=270.4
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
+++++.+.+ .+++++.+.+++.+.... ...|++.. ..+||+.+++++ ++++++|++|+|+++++..+
T Consensus 34 ~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l~~~ 100 (367)
T PRK02731 34 IIKLASNEN----PLGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEILELL 100 (367)
T ss_pred eEEecCCCC----CCCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHHHHH
Confidence 455555544 567788999999988753 45787653 479999999998 46788999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+.+++++||+|+++.|+|..+..... ..|.+++.++. +++.+|++++++.+++++++|++++|+||||.+++.++
T Consensus 101 ~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 175 (367)
T PRK02731 101 ARAYLGPGDEVIYSEHGFAVYPIAAQ--AVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEE 175 (367)
T ss_pred HHHhcCCCCEEEEecCCHHHHHHHHH--HcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999998888888 89999998886 34678999999999888999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
++++++.|+ +|+++|+|++|..+.+.+....++..+...+++++++|+||.|+++|+|+||+++++ ++++.
T Consensus 176 l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~~~ 246 (367)
T PRK02731 176 VERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EIIDA 246 (367)
T ss_pred HHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHHHH
Confidence 999999875 699999999999887655333333333344678999999999999999999999975 68887
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
+..... .+..+.++|.++..++++ ..++++..+.++++++.+.+.|+++ ++. + .|..|+|+|++++.. .
T Consensus 247 l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~-----~ 315 (367)
T PRK02731 247 LNRVRQ-PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG-----K 315 (367)
T ss_pred HHHccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC-----C
Confidence 776543 345677889998888874 4667888888899999999999988 676 4 355688999988431 2
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+ .++||.+.++..|+.++++||+++ +.++++.+++.|+++++
T Consensus 316 ~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 316 DAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred CHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 456777776 467999999988876789999997 56788999999988764
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-41 Score=312.21 Aligned_cols=324 Identities=20% Similarity=0.296 Sum_probs=261.9
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~ 88 (387)
+++...|.+ ++++|+.+++++.+.+......+|++ .+..+||+.++++++ ..+ ++|++|+|+++++..
T Consensus 28 ~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~i~~ 96 (356)
T PRK04870 28 MVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDELIQL 96 (356)
T ss_pred ceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHHHHH
Confidence 444555544 78999999999999886544567887 577999999999994 333 589999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~ 167 (387)
++.+++++||+|+++.|+|..+...++ ..|.+++.++++ +++.+|++++++++. .+++++++++|+||||..++.
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~ 172 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAK--LAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDD 172 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHH--HcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCH
Confidence 999999999999999999999999999 999999999985 347899999999885 478999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++| ++++|+||+|..+.... ..+ .+...++++++.|||| ++++|+|+||+++++ +++
T Consensus 173 ~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~i 236 (356)
T PRK04870 173 ADVERIIEAA---PGLVVVDEAYQPFAGDS--WLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AWI 236 (356)
T ss_pred HHHHHHHHHC---CCEEEEECCchhhcCcc--hHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HHH
Confidence 9999999998 67899999999865321 111 1233457999999999 799999999999875 688
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+..... ..+.+.++|.++..++++ ..++++..++++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 237 ~~~~~~~~-~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~------ 305 (356)
T PRK04870 237 AELDKVRP-PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP------ 305 (356)
T ss_pred HHHHHccC-CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC------
Confidence 88876543 345677888888777764 34578888889999999999999888876 4 4667889999876
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+..++... ++++||.+.+|..|+. .+++||+++. .++.+++++.|.++
T Consensus 306 --~~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 --DAAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred --CHHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 24455554 5778999999988753 6799999984 56677777776654
No 86
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=291.49 Aligned_cols=330 Identities=22% Similarity=0.382 Sum_probs=276.6
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCc
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLP--YKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
..|.+..|..++|+++|+++.+-.+ ...+|+++++++|+|.+++++...|+.|||..+++.|.|+++..-++ -+.|.
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~-~rTgv 193 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLR-WRTGV 193 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccce-eccCc
Confidence 4567777999999999999998665 34578999999999999999999999999999999999999876555 14688
Q ss_pred eeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccccccc
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF 195 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~ 195 (387)
+++++.+..++++.++.+.+|++... +.+.|+++||+||.|++++++++..+.++|.++|+.+|+||+|++-+|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 99999998889999999999987743 568899999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccC-----CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHH
Q 038416 196 GSTPYVPMGVFG-----SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPR 270 (387)
Q Consensus 196 ~~~~~~~~~~~~-----~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (387)
+...+.++.++. ..+++.++.|+||.||+||+|+|.+...+ .++....++... ....++..|+.+..
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmss-f~~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSS-FGLVSSQTQYLLAS 345 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhh-ccCCcHHHHHHHHH
Confidence 988887765432 34578999999999999999999999865 246666665543 56788899999999
Q ss_pred Hhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC-CCcHHHHHHHHHHhcCeEEE
Q 038416 271 IVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED-IGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 271 ~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~ 347 (387)
+|.+.. +.++.+..++++.+..++.+.|+++ |+.+. ...+|.|+|+++.+..-+. +....++...++.+-++.+.
T Consensus 346 LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS 423 (471)
T KOG0256|consen 346 LLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS 423 (471)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC
Confidence 998732 5788999999999999999999999 88865 8899999999987643221 22234566667777799999
Q ss_pred cCCccCC--CCeEEEEeeCChHh-HHHHHHHHHHHHHHhh
Q 038416 348 PGRTVGM--KNWLRIAFAAEPAT-LEDGLERIKAFCQRHA 384 (387)
Q Consensus 348 ~g~~~~~--~~~~Ri~~~~~~e~-~~~~~~~l~~~~~~~~ 384 (387)
||..|.. ++|||++++...++ ++-++++|++.+..+.
T Consensus 424 pG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 424 PGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred CCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 9998876 79999999876555 4449999999987654
No 87
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.4e-41 Score=314.82 Aligned_cols=341 Identities=16% Similarity=0.157 Sum_probs=251.6
Q ss_pred cccCCCCCCCCCCCCCCCc----HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE-----EEc
Q 038416 9 TRHSPWPRRPLGVSLLSDS----TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDV-----YLT 79 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~----~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i-----~~~ 79 (387)
.+++...|.. ++...+ +.+.++....+......+|++..|.++||+++++|+.+.......+++| +.+
T Consensus 49 ~~l~l~~g~~---p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g 125 (423)
T PLN02397 49 VKLNLGVGAY---RTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSG 125 (423)
T ss_pred ceEeccccee---eCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccc
Confidence 4455556541 233333 4555555444443444579999999999999999996544323333343 223
Q ss_pred CChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeC
Q 038416 80 LGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIIN 156 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~ 156 (387)
+|+. ++...+..++.+||+|++++|+|+.|...++ ..|.+++.+++...+++++|++.+++.+. ++++++++++
T Consensus 126 ~Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~--~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~ 202 (423)
T PLN02397 126 TGSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFR--DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHAC 202 (423)
T ss_pred hHHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHH--HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCC
Confidence 3332 3444444445699999999999999999999 99999999988544457899998888764 4678888899
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC--CCccccccC-CCccEEEEecCcccccccccceEEEE
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST--PYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ..+++++++||||.|+++|+|+||++
T Consensus 203 P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 203 AHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 999999999999999999999999999999999999988541 222332332 22469999999999999999999996
Q ss_pred --eeCCCCcccchhHHH----HHHhhhh-ccCCcchHHHHHHHHHhhhcc--HHH---HHHHHHHHHHHHHHHHHHhhcC
Q 038416 234 --TSDPNGILQNSGFVD----SIKGCLN-AASHPVTFIQAAVPRIVDETN--EAF---FAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 234 --~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~---~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
+++ ++.++ .+..... ...+++.+.|.++..+|.... +.+ +++..+.++++++.+.+.|+++
T Consensus 283 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 283 VVCKS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred EEeCC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 322 13333 3333322 234567788888888887531 233 6778889999999999999988
Q ss_pred C---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHH
Q 038416 302 P---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIK 377 (387)
Q Consensus 302 ~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~ 377 (387)
+ ++.++ .|++|+|+|++++ .+++..|++++||.+.++ + ||+++ .+++++++++++|+
T Consensus 356 ~~~~~~~~~-~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~i~~~~~~i~ 416 (423)
T PLN02397 356 GSPGDWSHI-TKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RISMAGLSSKNVPYLADAIH 416 (423)
T ss_pred CCCCCCCcc-cCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eEEEeeCCHHHHHHHHHHHH
Confidence 2 26633 7999999998774 358889999999999753 2 99996 89999999999999
Q ss_pred HHHH
Q 038416 378 AFCQ 381 (387)
Q Consensus 378 ~~~~ 381 (387)
+++.
T Consensus 417 ~~~~ 420 (423)
T PLN02397 417 AVVT 420 (423)
T ss_pred HHHh
Confidence 9874
No 88
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-41 Score=309.08 Aligned_cols=326 Identities=18% Similarity=0.313 Sum_probs=261.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.|.+ ++++++.+.+++.+.+... ...|++. +..+||+++|+++ ++++++|++|+|+++++..
T Consensus 25 ~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 25 KLIKLNTNEN----PYPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ceeeccCCCC----CCCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence 3466667665 6788999999999877643 4578764 6699999999998 4688999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++++++++||.|++++|+|+.+...++ ..|.++..+++. +++.+|++++++ .++++++++||||||.++|.+
T Consensus 93 ~~~~l~~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 93 AFLAFFNHDRPLLFPDITYSFYPVYAG--LYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHhcCCCCEEEEeCCCHHHHHHHHH--HcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999998888 899999999874 356789998864 467889999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++++ ++++|+||+|..+. +....++ ....+++++++||||.|+++|+|+||+++++ ++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence 9999998654 89999999998753 3222222 2234578999999999999999999999865 6888
Q ss_pred HHHhhhhc--cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 249 SIKGCLNA--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 249 ~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++...... ..+.+.+.|.++..++.+ .+++++..+++.++++.+.+.|+++ ++. + .|.+++|+|++++.
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~---- 301 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS---- 301 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence 88766532 346778899988888864 4567788888999999999999988 676 4 46678899988763
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++.+.+ .++||.+.+.......+++|++++ +.++++++++.|+++++
T Consensus 302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 1456777776 567999975433333679999997 56889999999988764
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-40 Score=305.08 Aligned_cols=315 Identities=17% Similarity=0.313 Sum_probs=250.5
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
++++|+.+.+++.+.+.......|++. +..++|+.+++++ ++++++|++|+|+++++..++.+++++||+|++
T Consensus 33 ~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv 105 (351)
T PRK14807 33 PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIY 105 (351)
T ss_pred CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHHHHHHHhcCCCCEEEE
Confidence 789999999999988765445678764 4689999999998 568899999999999999999999999999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
++|+|..+...++ ..|.+++.++++ .++.+|++++++++++ +++++++++|+||||..++.++++++++ +++
T Consensus 106 ~~p~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~---~~~ 178 (351)
T PRK14807 106 PHPSFAMYSVYSK--IAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIE---KSR 178 (351)
T ss_pred eCCChHHHHHHHH--HcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHH---hCC
Confidence 9999999988888 899999999875 3467899999999875 8899999999999999999777776665 556
Q ss_pred cEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcc
Q 038416 182 IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV 261 (387)
Q Consensus 182 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (387)
.++|+||+|.++. +....++ +...+++++++||||.|+++|+|+||+++++ ++++.+..... ....+
T Consensus 179 ~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~~~~~~~~~-~~~~~ 245 (351)
T PRK14807 179 GIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NILKYLNLVKS-PYNIN 245 (351)
T ss_pred CEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--------HHHHHHHHccC-CCCcC
Confidence 7899999998763 3222221 2334679999999999999999999999865 78888876544 35567
Q ss_pred hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHh
Q 038416 262 TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKE 341 (387)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (387)
.+.|.++..++++ .++.+..+.+.++++.+.+.|++++++. + .|.+|+|+|++++ +..++...+ .+
T Consensus 246 ~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~--------~~~~~~~~l-~~ 311 (351)
T PRK14807 246 SLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK--------DADYVYQGL-LE 311 (351)
T ss_pred HHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC--------CHHHHHHHH-HH
Confidence 8899999988875 4567777788888888999998887877 4 4666889998886 345565555 56
Q ss_pred cCeEEEcCCc-cCCCCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 342 ESVIILPGRT-VGMKNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 342 ~gi~v~~g~~-~~~~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+||.+.++.. ++..+++||+++. .++.+++++.|+++
T Consensus 312 ~gV~v~~~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~ 349 (351)
T PRK14807 312 RGILVRDFSKVEGLEGALRITVSS-CEANDYLINGLKEL 349 (351)
T ss_pred CCEEEEECCCCCCCCCeEEEEcCC-HHHHHHHHHHHHHh
Confidence 6999988653 3446899999975 34455555555543
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=8.8e-41 Score=307.88 Aligned_cols=313 Identities=18% Similarity=0.182 Sum_probs=251.8
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
++++|+.+.+++.+..... ..|++. +..+||+.|++++ ++++++|++|+|+++++..++.+++++||+|++
T Consensus 54 ~~~~~~~~~~a~~~~~~~~--~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli 124 (370)
T PRK09105 54 PLGPSPAARDAAARSAALS--GRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVT 124 (370)
T ss_pred CCCCCHHHHHHHHHHHHHh--cCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHHHHHHHHcCCCCEEEE
Confidence 6889999999999887542 468765 4889999999988 568999999999999999999999999999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
++|+|+.+...++ ..|.+++.+++.. ++.+|++++++. .++++++++++||||||.+++.++++++++.++ +++
T Consensus 125 ~~P~y~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~-~~~ 198 (370)
T PRK09105 125 ADPTYEAGWRAAD--AQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKP-AGS 198 (370)
T ss_pred eCCChHHHHHHHH--HcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCC-CCc
Confidence 9999999999999 9999999998753 567899999876 467899999999999999999999999999764 589
Q ss_pred EEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcc
Q 038416 183 IVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV 261 (387)
Q Consensus 183 ~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (387)
++|+||+|..+.. . . +...+ +..+++++++||||.||++|+|+||+++++ ++++.+... . ...++
T Consensus 199 ~lIvDEaY~~f~~--~-~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i~~l~~~-~-~~~~~ 264 (370)
T PRK09105 199 VLLVDEAYIHFSD--A-P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLLAKLARF-G-HNPLP 264 (370)
T ss_pred EEEEECchHHhcc--C-c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHHHHHHhc-C-CCCcC
Confidence 9999999987642 1 1 22222 234679999999999999999999999875 688877765 2 34467
Q ss_pred hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHh
Q 038416 262 TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKE 341 (387)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (387)
.+.+.++..++.+ ..++++..+.+.++++.+.+.|+++ ++. +..++++ |++++++. +..++...+++
T Consensus 265 ~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~-f~~~~~~~-------~~~~l~~~L~~- 331 (370)
T PRK09105 265 VPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQAN-CFMVDVKR-------PAKAVADAMAK- 331 (370)
T ss_pred HHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCc-EEEEeCCC-------CHHHHHHHHHH-
Confidence 7778888777764 5678888899999999999999987 777 4356655 44666652 45678887765
Q ss_pred cCeEEEcCCccC-CCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 342 ESVIILPGRTVG-MKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 342 ~gi~v~~g~~~~-~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+||.+. ..|. .++++||+++. +++++++++.|++.+
T Consensus 332 ~gI~v~--~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 332 QGVFIG--RSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred CCcEEe--cCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 499883 3343 36899999985 566777777776654
No 91
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-40 Score=306.12 Aligned_cols=303 Identities=18% Similarity=0.329 Sum_probs=243.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCc
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
...|+.. +..+||+.+++++ ++++++|++|+|+++++..++.+++.+| +.|+++.|+|..+...++ ..|.
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~--~~g~ 123 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCAR--LQNA 123 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH--HcCC
Confidence 3568875 4689999999998 4688999999999999999999999888 799999999998888888 8999
Q ss_pred eeeeeccCC-CCCccCChhhHHHhh-ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC
Q 038416 122 EARHYDLLP-EKRWEVDLDGVEALA-DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP 199 (387)
Q Consensus 122 ~~~~~~~~~-~~~~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~ 199 (387)
+++.+++.. ++++.+|++++++.+ .++++++++++|+||||..++.++++++++.|+ ++++||+||+|.+|.+..
T Consensus 124 ~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~-- 200 (364)
T PRK04781 124 PLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP-- 200 (364)
T ss_pred EEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc--
Confidence 999999843 346778899886544 678999999999999999999999999999986 479999999999987432
Q ss_pred CccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHH
Q 038416 200 YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAF 279 (387)
Q Consensus 200 ~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 279 (387)
......+..+++++++||||.|+++|+|+||+++++ ++++.+.+... ..+.+.+.|.++..+|.+....+
T Consensus 201 -~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~ 270 (364)
T PRK04781 201 -SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELIAVLRRCQA-PYPVPTPCAALAEQALSAPALAV 270 (364)
T ss_pred -chHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhcccHHH
Confidence 112222344679999999999999999999999875 78888887654 35677888888888887654456
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc-CCCCeE
Q 038416 280 FAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV-GMKNWL 358 (387)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~~ 358 (387)
..+..+.+.++++.+.+.|+.++++..+ .|.+|+|+|++++ +..++...+ +++||.+.+|..| +.++++
T Consensus 271 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~--------~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~ 340 (364)
T PRK04781 271 TARRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD--------DAEAAFQAL-LAAGVVVRDQRAAPRLSDAL 340 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHHH-HHCCeEEeeCCCCCCCCCeE
Confidence 6777778899999999999988776534 6788999999886 244555554 6789999999765 346899
Q ss_pred EEEeeCChHhHHHHHHHHHH
Q 038416 359 RIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 359 Ri~~~~~~e~~~~~~~~l~~ 378 (387)
||+++. +++.+++++.|++
T Consensus 341 Ris~~~-~~~~~~l~~al~~ 359 (364)
T PRK04781 341 RITLGT-PEQNDRVLAALQR 359 (364)
T ss_pred EEeCCC-HHHHHHHHHHHHH
Confidence 999975 3445555555544
No 92
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.6e-40 Score=305.31 Aligned_cols=328 Identities=21% Similarity=0.363 Sum_probs=266.6
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
|.+..++++.|++ ++++|+.+.+++.++... ...|+...+ .++|+.+++++ ++++++|++++|++++
T Consensus 17 ~~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNEN----PFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEI 83 (346)
T ss_pred CCCceEEccCCCC----CCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHH
Confidence 3455677777766 688999999999998643 346777555 89999999999 3678899999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
+..++.+++++||+|+++.|+|..+...+. ..|.++..+++.. ++.+|++++++++++++++|++++|+||||..+
T Consensus 84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~--~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~ 159 (346)
T TIGR01141 84 IELLIRAFLEPGDAVLVPPPTYSMYEISAK--IHGAEVVKVPLDE--DGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLL 159 (346)
T ss_pred HHHHHHHhcCCCCEEEEcCCCHHHHHHHHH--HcCCeEEEeccCC--CCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCC
Confidence 999999999999999999999998888888 8999999998854 356899999998888899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
+.++++++++.|+ +++++|+|++|+.+...+... + ......++++++|+||+|+++|+|+||+++++ +
T Consensus 160 ~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~-~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~ 227 (346)
T TIGR01141 160 SRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL-P--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------E 227 (346)
T ss_pred CHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH-H--HHhhCCCEEEEehhhHhhhchhhhceeeecCH--------H
Confidence 9999999999887 799999999999765432111 1 11222468999999999999999999999865 6
Q ss_pred HHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 246 FVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++++++.... ..+.++++|.++..+++.. .++.+..+.++++++.+++.|++++++. + .|.+|.|+|+.++.
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~--- 299 (346)
T TIGR01141 228 IIDALNKVRA-PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR--- 299 (346)
T ss_pred HHHHHHhccC-CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC---
Confidence 7888776543 3556788888888888753 3678888999999999999999887877 4 45667899988763
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC-CCeEEEEeeCChHhHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM-KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
+..++...+ .++||.+.||..|+. .+++|++++ ++++++++++.|
T Consensus 300 ----~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 300 ----DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred ----CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 355676666 467999999987744 689999987 678899888776
No 93
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-41 Score=307.27 Aligned_cols=298 Identities=20% Similarity=0.372 Sum_probs=243.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCc
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
.+.|+.. ...+|++.+++++ ++++++|++|+|+++++..++++++++| |+|+++.|+|..|...++ ..|.
T Consensus 51 ~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~--~~G~ 121 (351)
T PRK01688 51 LNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE--TIGV 121 (351)
T ss_pred cccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHH--HcCC
Confidence 4578764 4579999999998 5789999999999999999999999887 899999999999999999 9999
Q ss_pred eeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV 201 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~ 201 (387)
+++.++++ .++.+|++++++++ +++++++++|||||||..++.+++++|++.|++ +.++|+||+|.+|.... .
T Consensus 122 ~~~~v~~~--~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~---s 194 (351)
T PRK01688 122 EIRTVPTL--DNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA---S 194 (351)
T ss_pred EEEEeecC--CCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC---C
Confidence 99999885 35789999999987 588999999999999999999999999999986 68899999999876321 1
Q ss_pred cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 202 PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
....+...+++++++||||+||++|+|+||+++++ ++++.+.+... .+..+.+.+.++..+|.+...+++.
T Consensus 195 ~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~~l~~~~~-~~~v~~~~~~~a~~~L~~~~~~~~~ 265 (351)
T PRK01688 195 LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVINLLLKVIA-PYPLSTPVADIAAQALSPQGIAAMR 265 (351)
T ss_pred hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhcchHHHHH
Confidence 11112334689999999999999999999999865 78888876643 3456677777777788754446788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc-CCCCeEEE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV-GMKNWLRI 360 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~~Ri 360 (387)
+..+.+.++++.+.+.|++++++..+ .|.+++|+|++++ +..++...++ ++||.+.++..+ +..+++||
T Consensus 266 ~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps~~nfi~~~~~--------~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRi 335 (351)
T PRK01688 266 ERVAEINANRQWLIAALKEIPCVEQV-FDSETNYILARFT--------ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRI 335 (351)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEE
Confidence 88888999999999999988776534 6778999998875 3456777665 669999976544 55789999
Q ss_pred EeeCChHhHHHHHHHH
Q 038416 361 AFAAEPATLEDGLERI 376 (387)
Q Consensus 361 ~~~~~~e~~~~~~~~l 376 (387)
+++. .++.+++++.|
T Consensus 336 s~~~-~~e~~~l~~al 350 (351)
T PRK01688 336 TIGT-REECQRVIDAL 350 (351)
T ss_pred eCCC-HHHHHHHHHhh
Confidence 9984 57888887766
No 94
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-39 Score=295.22 Aligned_cols=322 Identities=18% Similarity=0.212 Sum_probs=251.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.+.+ ++++|+.+.+++.+.+.. ...|++..|..++|+.+++++ ++++++|++|+|+++++..
T Consensus 23 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 23 GLLDFAVNVR----HDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CeEEecCCCC----CCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHHHH
Confidence 4555555544 688999999999998764 357888789999999999998 4688999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++. + ++ +.++++.|+|..+...++ ..|.+++.++++. ++.+|++.+ +++++++++++|+||||.++|.+
T Consensus 91 ~~~-l-~~-~~viv~~P~y~~~~~~~~--~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 91 LAR-L-RP-RRAAVVHPSFTEPEAALR--AAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHh-c-CC-CeEEEeCCCChHHHHHHH--HcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 998 4 56 467788999999998888 8999999998853 267788754 45788999999999999999976
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++. ++|+ ++.++|+||+|+++.. +. ..++...+ .+++++++||||.|+++|+|+||+++++ ++++
T Consensus 160 ~l~---~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~ 224 (349)
T PRK07908 160 QLL---ALRR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA 224 (349)
T ss_pred HHH---HHHh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence 554 4554 4788999999998753 32 33343332 3468999999999999999999999865 6888
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+..... ....+++.+.++..++......++++..+.++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 225 ~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------ 295 (349)
T PRK07908 225 RLTRGRA-HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------ 295 (349)
T ss_pred HHHhcCC-CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence 8776543 345666777777777764345677888899999999999999988 777 4467889999998862
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
..++ ...++++||.+.||..|.. +++|||+++ ++++++++++.|++++.
T Consensus 296 --~~~~-~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 --AELL-RKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred --HHHH-HHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 3344 4455788999999998853 689999995 45677777777766553
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2e-39 Score=298.45 Aligned_cols=328 Identities=19% Similarity=0.265 Sum_probs=259.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+.+.+ .+++++.+.+++.+.+.. ...|+. .|..++|+.+++++ ++++++|++++|+++++..
T Consensus 23 ~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~~ 89 (352)
T PRK03321 23 GAIKLSSNET----PFGPLPSVRAAIARAAAG--VNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQQ 89 (352)
T ss_pred cceeccCCCC----CCCCCHHHHHHHHHHHHh--cCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHHH
Confidence 3455556555 677888999999988763 456764 68999999999999 4678899999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++..++++||+|+++.|+|..+...++ ..|.++..++++++ +.+|+++++++++++++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~gd~Vli~~p~y~~~~~~~~--~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 165 (352)
T PRK03321 90 LVQATAGPGDEVIFAWRSFEAYPILVQ--VAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA 165 (352)
T ss_pred HHHHhcCCCCEEEeCCCCHHHHHHHHH--HcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence 999999999999999999998888888 89999999987533 57899999999988999999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++.++++.+ ++++++|+|++|.++.+.+....++..+...+++++++|+||.|+++|+|+||+++++ ++++
T Consensus 166 ~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 236 (352)
T PRK03321 166 ELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIA 236 (352)
T ss_pred HHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHH
Confidence 888888876 4799999999999988765433334444445689999999999999999999999875 7888
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+.+.. ...+.+.+.|.++..++.. . +.+.+..+.+.++++.+.+.|++. ++. + .+.+|+|+|++++.
T Consensus 237 ~~~~~~-~~~~~s~~~q~~a~~~l~~-~-~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~------ 304 (352)
T PRK03321 237 ALRKVA-VPFSVNSLAQAAAIASLAA-E-DELLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE------ 304 (352)
T ss_pred HHHHhc-CCCCCCHHHHHHHHHHhcC-H-HHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC------
Confidence 887653 3467788888888777763 2 333445555566677788888887 666 3 44568899988752
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+ +++||.+.+ |+ .+++||+++ +.++.++++++|.+++.
T Consensus 305 -~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 -RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred -CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 355677765 678999987 32 457999984 56677777777776553
No 96
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.7e-39 Score=292.27 Aligned_cols=295 Identities=17% Similarity=0.203 Sum_probs=227.8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~ 122 (387)
...|+.. ...+||+.+++++ ++++++|++|+|+++++..++.. +++| .|++++|+|..|...++ ..|.+
T Consensus 34 ~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~--~~G~~ 102 (332)
T PRK06425 34 ISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAF--THGIR 102 (332)
T ss_pred cccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHH--HcCCe
Confidence 3568764 6799999999999 56889999999999999999974 5676 57777999999999999 99999
Q ss_pred eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++.+|++. +..|.+.+++ .+++++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ...
T Consensus 103 v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~ 175 (332)
T PRK06425 103 ISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EED 175 (332)
T ss_pred EEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhH
Confidence 99999853 2445555442 3789999999999999999999999999999999999999999999876532 111
Q ss_pred ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhcc-HHHHH
Q 038416 203 MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN-EAFFA 281 (387)
Q Consensus 203 ~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 281 (387)
.......+++++++||||.|+++|+|+||+++++ ++++.+.+... ....+...+. ++.... +.+++
T Consensus 176 ~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l~~~~~-~~~~~~~~~~----~l~~~~~~~~~~ 242 (332)
T PRK06425 176 VLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKISRKITE-PWSVCDPAID----FIRSIDLDYVAK 242 (332)
T ss_pred HHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHHHHcCC-CCccCHHHHH----HHHHhhhHHHHH
Confidence 2222233689999999999999999999999976 78887776533 2223333322 222222 34566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLR 359 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~R 359 (387)
+..+.++++++.+.+.|+++ ++..+ .+..|+|+|++++ ++.++...+++ +||.+.||..|+. ++++|
T Consensus 243 ~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~g~f~~~~~~--------~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iR 311 (332)
T PRK06425 243 HSLDIMENERSYLINNLEAM-GFRAA-GDPSANFITFMIP--------DAHDFYSYLLK-NGILVRLLDDYECLGEQYIR 311 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCceEEEEEcC--------CHHHHHHHHHH-CCeEEEECCCCCCCCCCEEE
Confidence 77889999999999999988 67633 4557889998875 35677777755 6999999998853 47999
Q ss_pred EEeeCChHhHHHHHHHHHHHH
Q 038416 360 IAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 360 i~~~~~~e~~~~~~~~l~~~~ 380 (387)
|+++. .++.+++++.|++++
T Consensus 312 is~~~-~~~~~~l~~al~~~~ 331 (332)
T PRK06425 312 IAIRR-RSFNIKLVNALRNFL 331 (332)
T ss_pred EEeCC-HHHHHHHHHHHHHHh
Confidence 99985 456667777776543
No 97
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-38 Score=294.28 Aligned_cols=323 Identities=22% Similarity=0.338 Sum_probs=253.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-cCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL-TLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~a~~ 87 (387)
.+++.+.+.+ ++++++.+.+++.+.... ...|++. ...++|+.+++++ ++++++|++ ++|+++++.
T Consensus 35 ~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~i~ 101 (361)
T PRK00950 35 SIIKLGSNEN----PLGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT------GVPVENIIVGGDGMDEVID 101 (361)
T ss_pred ceEEccCCCC----CCCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh------CCCHHHEEEeCCCHHHHHH
Confidence 4556666544 678899999999887764 3467764 3489999999998 567889999 788999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++++++++||+|+++.|+|..+...++ ..|.+++.++. .+++.+|++++++.++++++++++++|+||||..++.
T Consensus 102 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~--~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 102 TLMRTFIDPGDEVIIPTPTFSYYEISAK--AHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHH--HcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 9999999999999999999999888888 89999988874 3456899999999988889999999999999999997
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++.++ |+++|+++|+|++|.++. +....++ ....+++++++||||.|+++|+|+||+++++ +++
T Consensus 178 ~~l~~l---~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 242 (361)
T PRK00950 178 EDIRKI---LESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI 242 (361)
T ss_pred HHHHHH---HHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence 665554 567899999999999865 2222222 1223578999999999999999999999875 688
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+++... ....+++.+.++..++++ .+++++..+.++++++.+.+.|+ +. + .|.+++|+|++++.
T Consensus 243 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~----- 308 (361)
T PRK00950 243 DYYMRAKT-PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP----- 308 (361)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence 77776654 344677888888888764 45677777888888887776665 33 3 46678899998842
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
.+..++...+. ++||.+.||..|.. ++++|++++ +.++++++++.|++++
T Consensus 309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 25667777775 56999999887754 469999998 5578999999988765
No 98
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-39 Score=295.39 Aligned_cols=297 Identities=18% Similarity=0.289 Sum_probs=236.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCc
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
...|+.. +..+||+++|+++ ++++++|++|+|+++++..++++++++| |+|+++.|+|..|...++ ..|.
T Consensus 54 ~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~--~~g~ 124 (354)
T PRK04635 54 LNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAE--TFNV 124 (354)
T ss_pred hccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH--HcCC
Confidence 3568875 5799999999998 5789999999999999999999999998 899999999999998888 9999
Q ss_pred eeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV 201 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~ 201 (387)
+++.+|++ +++.+|++.+++ + +++++|++++||||||.+++.+++++|++.|+ +++||+||+|.++.... ...
T Consensus 125 ~v~~v~~~--~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~ 197 (354)
T PRK04635 125 GVKALPLT--ADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVA 197 (354)
T ss_pred EEEEEecC--CCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc-chH
Confidence 99999985 346788888874 4 58999999999999999999999999999876 49999999999875321 111
Q ss_pred cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 202 PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
.+ ....+++++++||||+|+++|+|+||+++++ ++++.+..... ..+.+.+.+.++..++.+....++.
T Consensus 198 ~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~ 266 (354)
T PRK04635 198 DL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELIEILMRVIA-PYPVPLPVSEIATQALSEAGLARMK 266 (354)
T ss_pred HH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHHHHHHhhcC-CCCCCHHHHHHHHHHHhcccHHHHH
Confidence 11 2234578999999999999999999999875 68877765433 3455667777777777654445677
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIA 361 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~ 361 (387)
+..+.++++++.+.+.|++++++. + .|..|+|+|++++ +..++.. ++.++||.+.++..+..++++||+
T Consensus 267 ~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~g~f~~~~~~--------~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis 335 (354)
T PRK04635 267 FQVLDLNAQGARLQAALSMYGGAK-V-LEGNGNYVLAKFD--------DVDAVFK-ALWDAGIVARAYKDPRLANCIRFS 335 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCcEEEEECC--------CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEE
Confidence 778889999999999999886666 4 3445778998875 2445554 457789999876544456899999
Q ss_pred eeCChHhHHHHHHHHHH
Q 038416 362 FAAEPATLEDGLERIKA 378 (387)
Q Consensus 362 ~~~~~e~~~~~~~~l~~ 378 (387)
++ +.++++++++.|++
T Consensus 336 ~~-~~e~~~~l~~al~~ 351 (354)
T PRK04635 336 FS-NRAETDKLIGLIRN 351 (354)
T ss_pred eC-CHHHHHHHHHHHHH
Confidence 86 46888888887754
No 99
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-38 Score=284.95 Aligned_cols=314 Identities=17% Similarity=0.256 Sum_probs=241.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
...++.+.|.+ ++++|+.+.+++.+.+.....+.|++. +..+||+.+++|+++.. +++++|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~----~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~i~ 90 (335)
T PRK14808 19 RDRTYLALNEN----PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEIIY 90 (335)
T ss_pred CceeEecCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHHHH
Confidence 45566666665 899999999999998765444457664 78999999999997542 67899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.+++++ |.|+++.|+|..|...++ ..|.++..++++.+ +.++... + ..++++++++||||||.+++.
T Consensus 91 ~~~~~~----d~v~v~~P~y~~~~~~~~--~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 91 VMMLMF----DRSVFFPPTYSCYRIFAK--AVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHh----CcEEECCCCHHHHHHHHH--HcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 999987 679999999999999999 99999999988532 3333222 2 256899999999999999998
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+ +++++||+||+|.+|. +....++ +...+++++++||||.|+++|+|+||+++++ +++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence 8888886 4799999999999864 2222221 2233579999999999999999999999975 788
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+.+... ..+.+.++|.++..++++ .++..+..+.+.++++.+.+.|+++ ++. +..| .|.|+|++++..
T Consensus 222 ~~l~~~~~-~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~~---- 291 (335)
T PRK14808 222 DAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEKE---- 291 (335)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCCc----
Confidence 88876653 456778888888888764 3456777778888889999999988 676 4244 577889988631
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
+..++... +.++||.+.. | .+++||+++.. ++.+++++.|+
T Consensus 292 --~~~~~~~~-l~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~ 332 (335)
T PRK14808 292 --EKERLLEH-LRAKNIAVRS---F--REGVRITIGKR-EENDMILKELE 332 (335)
T ss_pred --cHHHHHHH-HHHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHH
Confidence 34455554 5677999985 2 47899998663 55666666654
No 100
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-38 Score=284.69 Aligned_cols=306 Identities=18% Similarity=0.314 Sum_probs=236.3
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.+++++.+.+++.+.+.......|+. .|..+||+++++++ ++++++|++|+|+++++..++..+ +||+|++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v 99 (337)
T PRK03967 29 PFDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELISYLVKLF--EGKHIVI 99 (337)
T ss_pred CCCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHHHHHHHHh--CCCeEEE
Confidence 57888999999998886444567875 68899999999999 468899999999999999988876 6999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
+.|+|..+...++ ..|.+++.+++. .++.+|++.+++.. ++++++++++|+||||.+++.+++.+++ ++++
T Consensus 100 ~~P~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~----~~~~ 170 (337)
T PRK03967 100 TPPTFGMYSFYAK--LNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVL----ETGK 170 (337)
T ss_pred eCCChHHHHHHHH--HcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHH----hcCC
Confidence 9999998888888 899999999875 34688999998865 5788999999999999999977666654 3699
Q ss_pred EEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcch
Q 038416 183 IVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVT 262 (387)
Q Consensus 183 ~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (387)
++|+||+|.++.. ....++ ....+++++++||||.|+++|+|+||+++++ ++++.+.+... ..+.+.
T Consensus 171 ~ii~De~y~~~~~--~~~~~~--~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~~~~~~~~-~~~~~~ 237 (337)
T PRK03967 171 PVVLDEAYAEFSG--KSLIGL--IDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIIDALYRIKP-PFSLNI 237 (337)
T ss_pred EEEEECchhhhcc--cchHHH--HhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHHHHHhhcC-CCCCCH
Confidence 9999999998652 222121 2233579999999999999999999999865 78888877654 346678
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 263 FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
++|.++..++++ .+++.+..+.+.++++.+.+.|.+. . .|.+++|+|++++ +...+ .++
T Consensus 238 ~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~------------~~~~l-~~~ 296 (337)
T PRK03967 238 LTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD------------AYDYL-LEN 296 (337)
T ss_pred HHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH------------HHHHH-HHC
Confidence 899999888874 3456666666677777777777654 2 4678999997652 34545 456
Q ss_pred CeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 343 SVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 343 gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
||.+.++.. ...+++||+++. .++.+++++.|.++.+.
T Consensus 297 gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 297 GIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEG 334 (337)
T ss_pred CEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHh
Confidence 999987643 235799999975 34444455555444443
No 101
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=282.14 Aligned_cols=283 Identities=17% Similarity=0.184 Sum_probs=223.0
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceee
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEAR 124 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~ 124 (387)
.|+.. ..+||+.|++++ ..++|++|+|+++++..++. +.+||+|++++|+|+.+...++ ..|.++.
T Consensus 46 ~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~--~~g~~~~ 111 (330)
T PRK05664 46 RLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWR--RAGHQVR 111 (330)
T ss_pred hCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHH--HcCCeEE
Confidence 47653 389999999998 34799999999999998863 4799999999999999999999 9999999
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.+++ ++++++++ +++++++++||||||.+++.+++++|+++|++++++||+||+|.++. +..++.
T Consensus 112 ~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~ 176 (330)
T PRK05664 112 ELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT----PQHSLA 176 (330)
T ss_pred Eech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC----Cccccc
Confidence 8875 23445553 67889999999999999999999999999999999999999998753 112344
Q ss_pred ccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
.+...+++++++||||.|+++|+|+||+++++ ++++.+..... ....+.+.+.++..+|.+ ..+.++..
T Consensus 177 ~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~~~~~~~~-~~~~~~~~~~~~~~~L~~--~~~~~~~~ 245 (330)
T PRK05664 177 ACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLRALAELLG-PWTVSGPTRWLAQAALAD--TPWQRRQR 245 (330)
T ss_pred ccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHHHHHHhcC-CCCCCHHHHHHHHHHHhC--hHHHHHHH
Confidence 45455689999999999999999999999975 68888877643 345677888888888875 34566778
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC
Q 038416 285 GLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA 364 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~ 364 (387)
+.+.++++.+.+.|+++ ++. . .+..++|+|++++ +..++...+ .++||.+.+ |...+++||+++.
T Consensus 246 ~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~--------~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~ 310 (330)
T PRK05664 246 ERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE--------DAAALHEFL-ARRGILTRL---FEQPASLRFGLPA 310 (330)
T ss_pred HHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC--------CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCC
Confidence 88999999999999987 544 2 2233377787654 355666655 677999974 4456899999986
Q ss_pred ChHhHHHHHHHHHHHHHH
Q 038416 365 EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 365 ~~e~~~~~~~~l~~~~~~ 382 (387)
++++.+++.+.|++..++
T Consensus 311 ~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 311 DEADWARLDQALLAYRKE 328 (330)
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 666777777776665543
No 102
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-37 Score=281.84 Aligned_cols=287 Identities=15% Similarity=0.152 Sum_probs=228.8
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~ 122 (387)
..|+.. . .+||+.++++++ +. +++|++|+|+++++..+.. ++++|+ |+++.|+|..|...++ ..|.+
T Consensus 49 ~~Yp~~-~-~~L~~~ia~~~~------~~~~~~I~i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~--~~g~~ 116 (339)
T PRK06959 49 RRLPED-D-DGLAACAARYYG------APDAAHVLPVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFA--RHGHR 116 (339)
T ss_pred HhCCCc-h-HHHHHHHHHHhC------CCCcccEEECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHH--HCCCE
Confidence 358864 3 899999999983 44 5899999999999997765 467776 8899999999999999 99999
Q ss_pred eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++.++++. +. +....+.+++++||||||.+++.++++++++.|.+++.++|+||+|.++... .+
T Consensus 117 ~~~v~~~~--------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s 180 (339)
T PRK06959 117 VVPLDEAA--------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----AS 180 (339)
T ss_pred EEeecccc--------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----cc
Confidence 98887532 22 2224578999999999999999999999999999999999999999987532 22
Q ss_pred ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 203 MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 203 ~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
+..+...+++++++||||.|+++|+|+||++++. ++++.+.+... ....+.+.|.++.++|++ ..+.++
T Consensus 181 ~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li~~l~~~~~-~~~vs~~~q~a~~~~L~~--~~~~~~ 249 (339)
T PRK06959 181 LAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALLAALRDALG-AWTVSGPARHAVRAAFAD--AAWQAA 249 (339)
T ss_pred chhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHHHHHHHhcC-CCCCcHHHHHHHHHHhCc--HHHHHH
Confidence 3333233568999999999999999999999975 78888887754 455678899999999975 467788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF 362 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~ 362 (387)
..+.++++++.+.+.|+++ ++. + . ..++|+|++++ +..++...+ .++||.+.. |+..+++||++
T Consensus 250 ~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~--------~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi 313 (339)
T PRK06959 250 MRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP--------RAAALHAAL-ARRGIWTRY---FAPPPSVRFGL 313 (339)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC--------CHHHHHHHH-HhCCeEEEE---CCCCCeEEEEC
Confidence 8899999999999999988 666 3 2 35788898775 345666665 566999974 44467999999
Q ss_pred eCChHhHHHHHHHHHHHHHHhhh
Q 038416 363 AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 363 ~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+.++++.+++++.|+++++-+..
T Consensus 314 ~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 314 PADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Confidence 77777888888888887776654
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.2e-37 Score=283.47 Aligned_cols=286 Identities=20% Similarity=0.265 Sum_probs=234.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~ 122 (387)
...|+...+ .++|+.+++++ ++++++|++|+|+++++..+..+ +.+| .|++++|+|..+...+. ..|.+
T Consensus 41 ~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~--~~g~~ 109 (330)
T TIGR01140 41 WARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWR--AAGHE 109 (330)
T ss_pred HhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHH--HcCCE
Confidence 457887665 99999999998 45789999999999999998766 4677 69999999999999999 99999
Q ss_pred eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++.++ |++++++.++ +++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+.. +
T Consensus 110 ~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~ 175 (330)
T TIGR01140 110 VVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA----S 175 (330)
T ss_pred EEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc----c
Confidence 88875 7888888884 67789999999999999999999999999999999999999999876431 2
Q ss_pred cccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 203 MGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 203 ~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
+..+ +..+++++++|+||.|+++|+|+||+++++ ++++.+..... ..+.+.++|.++..++++ ..+..
T Consensus 176 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~ 244 (330)
T TIGR01140 176 LAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------ALLARLREALG-PWTVNGPARAAGRAALAD--TAWQA 244 (330)
T ss_pred hhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HHHHHHHhcCC-CCCchHHHHHHHHHHHhc--hHHHH
Confidence 2222 234678999999999999999999999975 67787776543 456678889999888875 45667
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLR 359 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~R 359 (387)
+..+.++++++.+.+.|++++.+. + .|.+|+|+|++++ +..++.+.++ ++||.+.||..|.. .+++|
T Consensus 245 ~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~--------~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iR 313 (330)
T TIGR01140 245 ATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP--------DAAALHEALA-RRGILIRDFDNFPGLDPRYLR 313 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC--------CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEE
Confidence 788999999999999999986555 4 4667899999876 3457777775 56999999999853 47999
Q ss_pred EEeeCChHhHHHHHHHH
Q 038416 360 IAFAAEPATLEDGLERI 376 (387)
Q Consensus 360 i~~~~~~e~~~~~~~~l 376 (387)
|+++...++ +.++++|
T Consensus 314 i~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 314 FALPTDEEN-DRLEEAL 329 (330)
T ss_pred EEecCHHHH-HHHHHhh
Confidence 999876655 6666654
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.1e-36 Score=272.87 Aligned_cols=300 Identities=16% Similarity=0.228 Sum_probs=218.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+..++.+.+.. .++ |+.+.+++.++... ...|+. ...+|+.+++++. ++|++|+|+++++.
T Consensus 8 ~~~i~l~~~~n----p~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al~ 68 (311)
T PRK08354 8 EGLIDFSASVN----PYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEALY 68 (311)
T ss_pred cceeEecCCCC----CCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHHH
Confidence 34555555422 234 57889999887654 346764 4789999999882 47999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++..+ .+||+|+++.|+|+.+...++ ..|.++..++ +|++.++++++ +++++++++|+||||.+++.
T Consensus 69 ~~~~~~-~~gd~vlv~~P~y~~~~~~~~--~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~ 136 (311)
T PRK08354 69 LIGILA-LRDRKVIIPRHTYGEYERVAR--FFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNF 136 (311)
T ss_pred HHHHhh-CCCCeEEEeCCCcHHHHHHHH--HcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCH
Confidence 888654 489999999999999999999 9999987653 47888888876 56789999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+||+|.+|.+++.. . ..+++++++||||.|+++|+|+||+++ +.
T Consensus 137 ~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~ 198 (311)
T PRK08354 137 KELKPLLDAVEDRNALLILDEAFIDFVKKPES---P----EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FE 198 (311)
T ss_pred HHHHHHHHHhhhcCcEEEEeCcchhccccccc---c----CCCcEEEEeccHhhcCCccceeeeeee-----------hH
Confidence 99999999999999999999999998876421 1 145799999999999999999999997 23
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+++... ....+...+.++..+++. ...++.+..+.+.+.++.+.+.+ ...|.+ .|+++.++
T Consensus 199 ~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~-~~~~~~~~------ 261 (311)
T PRK08354 199 EAFRSVRM-PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSDA-NFFIKDVG------ 261 (311)
T ss_pred HHHHHcCC-CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCCC-cEEEEECC------
Confidence 44444432 334455666666666553 22334444444444443332222 113454 45555553
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCC--hHhHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAE--PATLEDGLERI 376 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~--~e~~~~~~~~l 376 (387)
++.++...+ .++||.+.||..|+.++++||+++.. .+++..+++.+
T Consensus 262 --~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 --DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALREW 309 (311)
T ss_pred --CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 345676765 66799999999998779999999753 35555555543
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=265.66 Aligned_cols=329 Identities=22% Similarity=0.307 Sum_probs=268.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHh-hcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce
Q 038416 44 NCYSPTLGVPSARRGIADYLN-RDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~-~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~ 122 (387)
.+|++..|.++|...+.++.. ..+.......+|++|+|.+.+++.+++.++++||+|++..++|.+....++ ..|++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~--a~gv~ 171 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSME--ALGVK 171 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcc--ccCce
Confidence 589999999999999999766 344445566799999999999999999999999999999999999888888 99999
Q ss_pred eeeeccCCCCCccCChhhHHHhhcc---C-----ceEEEEeCC--CCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADE---N-----TVAIVIINP--GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~---~-----~~~v~l~~p--~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
+++++++. .++++|.|++.++. . ..-|+++-| +||||..++.+..++|.++|++|++++|+||.|.-
T Consensus 172 ~ipv~md~---~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 172 IIPVKMDQ---DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred EEeccccC---CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce
Confidence 98888743 37899999987643 1 134556666 89999999999999999999999999999999998
Q ss_pred cccCC--------CC-----------CccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 193 LAFGS--------TP-----------YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 193 ~~~~~--------~~-----------~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
+.++. .+ ..++.+++.+++++.+.||||. ..||+|+||+.+++ .+++++-..
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~ 319 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDL 319 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhh
Confidence 88772 11 2234556778899999999999 59999999999976 577777665
Q ss_pred hh-ccCCcchHHHHHHHHHhhhccH----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-CCCCCCCceEEEEEecCccc--
Q 038416 254 LN-AASHPVTFIQAAVPRIVDETNE----AFFAKIIGLLKETADICYERIKE-IPCI-TCPVKPQGAMFVMVKLNVSM-- 324 (387)
Q Consensus 254 ~~-~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~g~~~~~~~~~~~-- 324 (387)
.. .+.+++.+.|..+.++|+...+ .|+.+.+..+..++.++..++.+ +|.- -.++.|.+|+|+|++++...
T Consensus 320 ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~ 399 (472)
T KOG0634|consen 320 AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFD 399 (472)
T ss_pred cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccc
Confidence 43 4567899999999999987554 67778888888999999999987 6643 33668999999999997211
Q ss_pred -ccCCCcHHHHHHHHHHhcCeEEEcCCccCC------CC-eEEEEee-CChHhHHHHHHHHHHHHHHhhhc
Q 038416 325 -LEDIGDDLEFCLKLAKEESVIILPGRTVGM------KN-WLRIAFA-AEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 325 -~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~-~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
.+++...+++....+.+.||.+.+|..|.. .+ +||++++ .+.|+++++++++..+++++.+.
T Consensus 400 ~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 400 TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred cccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 112223567788888999999999998854 23 8999996 58899999999999999987653
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.9e-35 Score=272.38 Aligned_cols=345 Identities=30% Similarity=0.494 Sum_probs=275.4
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHH
Q 038416 12 SPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLS 91 (387)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~ 91 (387)
+.+.|.+ ++..++.++.++.+.........|+...+..++++.+++++...++.....+++++++|+++++..++.
T Consensus 2 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~ 77 (350)
T cd00609 2 DLSIGEP----DFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLR 77 (350)
T ss_pred CCCCCCC----CCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHH
Confidence 4445544 567777777777663233344577888899999999999999877766678899999999999999999
Q ss_pred hhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 92 VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 92 ~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
++.++||+|+++.++|+++...++ ..|.++..++.........+.+.++....+++++|++++|+||||..+|.++++
T Consensus 78 ~~~~~g~~vl~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 78 ALLNPGDEVLVPDPTYPGYEAAAR--LAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred HhCCCCCEEEEcCCCchhHHHHHH--HCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHH
Confidence 999999999999999999999999 999999999886544333223566666778899999999999999999999999
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
+|+++|+++|+++|+|++|+.+.+.+.....+......+.+++++|++|.++.+|.++|++++++ +++.+.++
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~ 228 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLK 228 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHH
Confidence 99999999999999999999877665443222233344567999999999988999999999864 14677776
Q ss_pred hhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCc
Q 038416 252 GCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGD 330 (387)
Q Consensus 252 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 330 (387)
.... ....++...+.++..+++... .++++..+.+.++++.+.+.|++++.... ..+..|+++|++++.. .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~g~~~~~~~~~~------~ 300 (350)
T cd00609 229 KLLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVV-VKPSGGFFLWLDLPEG------D 300 (350)
T ss_pred HHHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCccEEEEEecCCC------C
Confidence 6543 346778888888888888643 67788889999999999999998754442 3677899999888642 2
Q ss_pred HHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeCChHhHHHHHHHHH
Q 038416 331 DLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
..+.+.+++.++||.+.++..|. .+.++||+++..+++++.++++|+
T Consensus 301 ~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 301 DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 45666777788899999988776 578999999766999999999885
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-34 Score=235.56 Aligned_cols=344 Identities=23% Similarity=0.331 Sum_probs=253.4
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC----C----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRT----A----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~----~----~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
.++..-|+| ..-|++.+..++.... . ...+|..++|...|-+++++++++++|+...+++|.+|+|
T Consensus 32 ~imLggGNP------a~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnG 105 (417)
T COG3977 32 AIMLGGGNP------ARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNG 105 (417)
T ss_pred ceeeCCCCc------ccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCC
Confidence 556667776 4556666666654442 1 3468999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcC---CC--CeEEEc-CCCCcchHHHhhccCCCceeee---eccCCCC--CccCChhhHHHhhccCce
Q 038416 82 CSQAIEISLSVLAR---PG--ANILIP-RPGYPLYEIHAAGSNNNLEARH---YDLLPEK--RWEVDLDGVEALADENTV 150 (387)
Q Consensus 82 ~~~a~~~~~~~l~~---~g--~~vl~~-~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~--~~~~~~~~l~~~~~~~~~ 150 (387)
++.+.+-++..+.. .| .+|+++ .|.|.+|..... ....=+.+ +++.++. .+.+|.+++. +...+.
T Consensus 106 SQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l--~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g 181 (417)
T COG3977 106 SQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL--EEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTG 181 (417)
T ss_pred ccchHHHHHHHhcCccCCCcceeEeeccChhhcccccccc--CccceeeccCCcccccccceeeccCHHHcc--cccccc
Confidence 99999999988853 23 367765 889988865544 22211111 1122222 3456666655 456788
Q ss_pred EEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc--ccc--cCCCccEEEEecCcccccccc
Q 038416 151 AIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP--MGV--FGSIVPVITLGSISKRWIVPG 226 (387)
Q Consensus 151 ~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~--~~~--~~~~~~~~~i~s~sK~~~~~g 226 (387)
+|+++.|.||||.+++.+|+.+|..++++||+++|+|.+|+. ++.. +.+ .-..++++.+.|+||. |+||
T Consensus 182 ~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG 254 (417)
T COG3977 182 AICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATPLWNENIILCMSLSKL-GLPG 254 (417)
T ss_pred eEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceecccccccCCCCEEEEeehhhc-CCCC
Confidence 999999999999999999999999999999999999999984 2222 111 2345789999999999 9999
Q ss_pred cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHH------HHHHHHHHHHHHHHHhh
Q 038416 227 WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAK------IIGLLKETADICYERIK 299 (387)
Q Consensus 227 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~l~ 299 (387)
.|+|.+++.+ +++..+..... .+..+..++++.+..+++.+.-..+.+ ..++.+...+.+++.|.
T Consensus 255 ~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp 326 (417)
T COG3977 255 SRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLP 326 (417)
T ss_pred cceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcC
Confidence 9999999975 77777776543 455778888898888888754222222 22333333334444444
Q ss_pred cCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---------CCeEEEEeeCChHhHH
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---------KNWLRIAFAAEPATLE 370 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~~Ri~~~~~~e~~~ 370 (387)
+. -+. .+.|++..|+|+.|....+ ++++++++| ++.|+++.||..|.. ++|+|+++..++++++
T Consensus 327 ~~-~~~-iHkpEGAIFlWLWf~dLPI----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie 399 (417)
T COG3977 327 EY-RCL-IHKPEGAIFLWLWFKDLPI----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIE 399 (417)
T ss_pred cc-cee-eecCCcceeehhhhccCCC----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHH
Confidence 43 244 5689999999998865433 566777766 888999999998754 4799999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 038416 371 DGLERIKAFCQRHAK 385 (387)
Q Consensus 371 ~~~~~l~~~~~~~~~ 385 (387)
.++.+|.+.+++...
T Consensus 400 ~Gva~lae~ve~~yq 414 (417)
T COG3977 400 KGVAILAEEVERAYQ 414 (417)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887643
No 108
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-33 Score=241.57 Aligned_cols=346 Identities=28% Similarity=0.447 Sum_probs=269.2
Q ss_pred cHHHHHHHHHHhcC--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCCeEEEc
Q 038416 27 STVAEDAVVDALRT--AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGANILIP 103 (387)
Q Consensus 27 ~~~v~~a~~~~~~~--~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~~vl~~ 103 (387)
|..+++.....+.. +....|+.++|.+-+|+.+|+|+.++.|++.++++|++|+|++.|+..++..++ .+.+.|++|
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliP 167 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIP 167 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEee
Confidence 34444444444443 256789999999999999999999999999999999999999999999999986 566899999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
.|.|+-|..... ..|...+.+.++++++|.+|.++|++.+++ +.++++++||.||||++++.+.+++|+.+|.
T Consensus 168 iPQYPLYsAti~--l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~ 245 (475)
T KOG0258|consen 168 IPQYPLYSATIS--LLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAA 245 (475)
T ss_pred cCCCchhHHHHH--HhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence 999999988888 999999999999999999999999987754 5788999999999999999999999999999
Q ss_pred hcCcEEeecccccccccCCC-CCcccc----cc----CCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHH
Q 038416 179 NLGIIVIADEVYNHLAFGST-PYVPMG----VF----GSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 179 ~~~~~li~D~~~~~~~~~~~-~~~~~~----~~----~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++++++.||+|++-.|... .+.+++ .+ .....++..+|.||.+. =.|.|-||+-.-+ ..|+..+
T Consensus 246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n-----~~prv~~ 320 (475)
T KOG0258|consen 246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLN-----RDPRVKQ 320 (475)
T ss_pred HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeeccc-----CChhHHH
Confidence 99999999999998887753 444432 12 22345788889999873 5789999987644 2356666
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhcc---------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEe
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETN---------EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~ 319 (387)
.+.+.....-.++..+|......+.... ....+.+...++++++.+.+.+++++|+.+. .+++.+|+|.+
T Consensus 321 qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~ 399 (475)
T KOG0258|consen 321 QIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQ 399 (475)
T ss_pred HHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeeccc
Confidence 6666654445566667776666555322 1234566688888999999999999999976 89999999988
Q ss_pred cCccc-------ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCC---eEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 320 LNVSM-------LEDIGDDLEFCLKLAKEESVIILPGRTVGMKN---WLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 320 ~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~---~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+..+. ..+...+.-.+..||+..||++.||+.|+... +||..+-... + +.+++++++-.+.
T Consensus 400 i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 400 ISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEF 470 (475)
T ss_pred ccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHH
Confidence 65431 11233444567889999999999999999843 5888873322 4 6677776665554
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=3.8e-32 Score=254.70 Aligned_cols=341 Identities=16% Similarity=0.117 Sum_probs=247.0
Q ss_pred cccCCCCCCCCCCCCCCCcH---HHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDST---VAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
-.++++.|+| ++|+++++ .+.+++.+++..+. ..|....+..+||++++++++ .+++++|+|+++|
T Consensus 37 ~~~~L~~g~p--~~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A 105 (460)
T PRK13238 37 NPFLLKSEDV--FIDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAA 105 (460)
T ss_pred CEEeCCCCCC--CCCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHH
Confidence 4556668777 34566655 68888888876543 479988999999999999993 4689999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC------CCcc--CChhhHHHhhcc----CceEEE
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE------KRWE--VDLDGVEALADE----NTVAIV 153 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~~~~~l~~~~~~----~~~~v~ 153 (387)
+..++.+++++|| |++++|.|..+...+. ..|.+++.+++.+. ++|. +|++.|++.+++ ++++|+
T Consensus 106 ~~~~~~all~pGD-Vii~~p~~~~~~~~i~--~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Iv 182 (460)
T PRK13238 106 EQILFPVLIKKGD-VVPSNYHFDTTRAHIE--LNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIV 182 (460)
T ss_pred HHHHHHHhCCCCC-EEccCCcccchHHHHH--HcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEE
Confidence 9999999999999 9999999999998888 89999999988542 3454 999999999874 689999
Q ss_pred EeCCCCCcc-ccCCHHHHHHHHHHHHhcCcEEeecccccc--cccCC-----CCCccccccCCCccEEEEecCccccccc
Q 038416 154 IINPGNPCG-NVFSYQHLQKIARTARNLGIIVIADEVYNH--LAFGS-----TPYVPMGVFGSIVPVITLGSISKRWIVP 225 (387)
Q Consensus 154 l~~p~nptG-~~~~~~~~~~l~~~~~~~~~~li~D~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~i~s~sK~~~~~ 225 (387)
+++|+|||| ..++.+++++|.++|++||++||.|+++.. ..|.. ....++..+ ...+.|++|.+.+.
T Consensus 183 l~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~S 257 (460)
T PRK13238 183 MTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTMS 257 (460)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEEe
Confidence 999999997 999999999999999999999999997742 22221 111222211 12223444444444
Q ss_pred ccce------EEEEeeCCCCcccchhHHHHHHhhh----h-ccCC-cchHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHH
Q 038416 226 GWRL------GWLVTSDPNGILQNSGFVDSIKGCL----N-AASH-PVTFIQAAVPRIVDET-NEAFFAKIIGLLKETAD 292 (387)
Q Consensus 226 g~r~------G~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 292 (387)
|++. |++++++ +++.++++... . .+.+ .+...|.+++..+.+. .+.++..+ .++++
T Consensus 258 g~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~ 326 (460)
T PRK13238 258 AKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVE 326 (460)
T ss_pred cccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHH
Confidence 4432 4555543 25777776552 1 1223 3444477777666532 23444443 33568
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEEecCcc--cccC-CCcHHHHHHHHHHhcCeEEEcCCccCC-------------CC
Q 038416 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNVS--MLED-IGDDLEFCLKLAKEESVIILPGRTVGM-------------KN 356 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~ 356 (387)
++.+.|++. |+.++ .|.+|+++++++... ..+. ...+.+++..|+++.||.+.|++.|.. ..
T Consensus 327 ~l~~~L~~~-G~~~~-~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~ 404 (460)
T PRK13238 327 YLGEGLEEA-GVPIQ-TPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAE 404 (460)
T ss_pred HHHHHHHHC-CCCeE-ccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccc
Confidence 888888887 88855 799999999988542 1111 013578999999999999999886642 26
Q ss_pred eEEEEeeC---ChHhHHHHHHHHHHHHH
Q 038416 357 WLRIAFAA---EPATLEDGLERIKAFCQ 381 (387)
Q Consensus 357 ~~Ri~~~~---~~e~~~~~~~~l~~~~~ 381 (387)
.+|+++.. +.+.++.+.++|+...+
T Consensus 405 ~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 405 LLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred eEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 89999966 89999999999887663
No 110
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2.6e-31 Score=248.82 Aligned_cols=321 Identities=14% Similarity=0.150 Sum_probs=236.5
Q ss_pred CCcHHHHHHHHHHhcCCCCC-CCCC-------CCCcHHHHHHHHHHHhhcCCCCC-CCCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHYN-CYSP-------TLGVPSARRGIADYLNRDLPYKL-SPEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-~y~~-------~~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
+.|+.+.+++.+.+.....+ +.+. .....++|+.+++++ ++ ++++|++++|+++++..++.++
T Consensus 30 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~~~~~t~~i~~~~~~~~~ 103 (401)
T PRK10874 30 LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVWTRGTTESINLVAQSYAR 103 (401)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEEECCHHHHHHHHHHHhhh
Confidence 57789999999888643111 0110 122567888888888 34 6789999999999999999998
Q ss_pred --cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 94 --ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 --~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++||+|++++++|++ +...++ ..|.+++.++++ .++.+|++++++++++++++|++++|+||||.++|
T Consensus 104 ~~~~~gd~vl~~~~~~~s~~~~~~~~~~--~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~- 178 (401)
T PRK10874 104 PRLQPGDEIIVSEAEHHANLVPWLMVAQ--QTGAKVVKLPLG--ADRLPDVDLLPELITPRTRILALGQMSNVTGGCPD- 178 (401)
T ss_pred ccCCCcCEEEECCcchHHHHHHHHHHHH--HhCCEEEEEecC--CCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC-
Confidence 3789999999999865 455667 789999999874 34578999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.++|+++|+++|+|++|+...+ ...+..+. ..+++.|++|.++++| +|++++++ +++
T Consensus 179 --~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~~~~--------~~~ 239 (401)
T PRK10874 179 --LARAITLAHQAGMVVMVDGAQGAVHF----PADVQALD---IDFYAFSGHKLYGPTG--IGVLYGKS--------ELL 239 (401)
T ss_pred --HHHHHHHHHHcCCEEEEECCcccccc----cCCchhcC---CCEEEEecccccCCCc--cEEEEEch--------HHH
Confidence 77888899999999999999974222 12232332 2378899999988777 69998865 444
Q ss_pred HHHHhhh----------------------hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 248 DSIKGCL----------------------NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 248 ~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+.+.... ...++++...+.++.++++...+....+..++..+.++++.+.|+++|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 319 (401)
T PRK10874 240 EAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFR 319 (401)
T ss_pred hcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 4432111 012355666777777777654444556677888888899999999888887
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------CCCeEEEEee--CChHhHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------MKNWLRIAFA--AEPATLEDGLER 375 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~~Ri~~~--~~~e~~~~~~~~ 375 (387)
.. .+..+.++++.++. .+..++...| .++||.+.+|..+. ..+++|+|++ ++++|++.+++.
T Consensus 320 ~~-~~~~~~i~~~~~~~------~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~a 391 (401)
T PRK10874 320 SF-RCQDSSLLAFDFAG------VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNA 391 (401)
T ss_pred Ee-CCCCCcEEEEEECC------cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHH
Confidence 44 33334455555542 1345565554 67799999987653 3579999995 589999999999
Q ss_pred HHHHHHHh
Q 038416 376 IKAFCQRH 383 (387)
Q Consensus 376 l~~~~~~~ 383 (387)
|+++++.+
T Consensus 392 l~~~~~~~ 399 (401)
T PRK10874 392 VDRALELL 399 (401)
T ss_pred HHHHHHHh
Confidence 99988765
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.9e-31 Score=240.99 Aligned_cols=310 Identities=19% Similarity=0.179 Sum_probs=229.3
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
.|.++..+|.+.++..+++..- . +...-+.+|++.+|+++ +++++++++++|+.+++..++.+++++||.
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLETY--V--GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ccccCCCChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCE
Confidence 4557889999999999888642 1 22234567777777777 457799999999999999999999999999
Q ss_pred EEEc---CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 100 ILIP---RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 100 vl~~---~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
|+++ .|+|..+...++ ..|.++... .++++++. .+++++|+++ +++++|.+++.+++++|+++
T Consensus 98 Vli~~~d~p~~~s~~~~~~--l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~l 163 (346)
T TIGR03576 98 VVHYLPEKPAHPSIPRSCK--LAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQ 163 (346)
T ss_pred EEECCCCCCCchhHHHHHH--HcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHH
Confidence 9975 578888888888 888875322 13444432 2457777664 56899999999999999999
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN- 255 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~- 255 (387)
|+++|+++|+||+|+.+........+...+.. .+++.|+||+ ++|+|+||+++++ ++++.+++...
T Consensus 164 a~~~~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~~--------~li~~l~~~~~~ 230 (346)
T TIGR03576 164 AKSKEAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGRK--------ELVDKIKSVGEQ 230 (346)
T ss_pred HHHcCCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeCH--------HHHHHHHHhhcC
Confidence 99999999999999975432111112222222 2677899994 7899999999976 78888887754
Q ss_pred ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHH
Q 038416 256 AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFC 335 (387)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 335 (387)
+..+.+++.+.++..+|+... .+.+.+.++++++.+.+.++++ . + .|.+++|+|++++. .++.+++
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~------~~~~~~~ 296 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEE------EKLIEIG 296 (346)
T ss_pred cccCccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCC------CCHHHHH
Confidence 344567778888888886532 2455677778887777777643 3 3 23445589988863 1345788
Q ss_pred HHHHHhcCeEEEcCCccC-CCCeEEEEeeCChH---hHHHHHHHHHHHH
Q 038416 336 LKLAKEESVIILPGRTVG-MKNWLRIAFAAEPA---TLEDGLERIKAFC 380 (387)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~-~~~~~Ri~~~~~~e---~~~~~~~~l~~~~ 380 (387)
..+++++||.+.||..|. .++|+||+++.+++ +.+.+++.|++.+
T Consensus 297 ~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 297 LDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 888999999999998774 47899999998765 7888888887654
No 112
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=6.2e-31 Score=246.00 Aligned_cols=321 Identities=15% Similarity=0.157 Sum_probs=234.4
Q ss_pred CCcHHHHHHHHHHhcCCCCC-CCCCC-------CCcHHHHHHHHHHHhhcCCCCC-CCCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHYN-CYSPT-------LGVPSARRGIADYLNRDLPYKL-SPEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-~y~~~-------~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
+.|+.+.+++.+.+.....+ ++... ....++|+.++++++ . ++++|++|+|+++++..++.++
T Consensus 27 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~t~g~t~~l~~~~~~~~~ 100 (398)
T TIGR03392 27 LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVWTRGTTESINLVAQSYAR 100 (398)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChHHHHHHHHHHhhh
Confidence 57889999999887532111 12211 124568888998883 4 4689999999999999999998
Q ss_pred --cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 94 --ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 --~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++||+|++++|+|++ +...++ ..|.+++.++++. ++.+|+++++++++++++++++++|+||||..++
T Consensus 101 ~~~~~gd~Vl~~~~~~~s~~~~~~~~~~--~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~- 175 (398)
T TIGR03392 101 PRLQPGDEIIVSEAEHHANLIPWLMVAQ--QTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD- 175 (398)
T ss_pred ccCCCCCEEEECCcchhHHHHHHHHHHH--HcCcEEEEEecCC--CCCcCHHHHHHHhccCceEEEEECccccccccCC-
Confidence 4789999999999976 455667 7899999998753 3468999999999989999999999999999987
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.++|+++|+++|+|++|+...+ ...+..... .+++.|.+|.++++| +||++.++ +++
T Consensus 176 --~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l~~~~--------~~~ 236 (398)
T TIGR03392 176 --LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVLYGKT--------ELL 236 (398)
T ss_pred --HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEEEEcH--------HHH
Confidence 77889999999999999999975322 122322322 377889999887766 89999875 344
Q ss_pred HHHHhhh---------------------h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 248 DSIKGCL---------------------N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 248 ~~~~~~~---------------------~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+.+.... . -.++++.....++.++++...+..+.+..++..+.++++.+.|++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~ 316 (398)
T TIGR03392 237 EAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFR 316 (398)
T ss_pred hhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 4332110 0 12355555667777766654444556677888888999999998888877
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------CCCeEEEEee--CChHhHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------MKNWLRIAFA--AEPATLEDGLER 375 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~~Ri~~~--~~~e~~~~~~~~ 375 (387)
....+. ..++++.++. .+..++...| .++||.+.+|..+. .++++|+|++ ++++|++.+++.
T Consensus 317 ~~~~~~-~~i~~~~~~~------~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~ 388 (398)
T TIGR03392 317 SFRCPG-SSLLAFDFAG------VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDA 388 (398)
T ss_pred EeCCCC-CcEEEEEeCC------cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHH
Confidence 442333 3455555542 1345666655 67799999987653 3579999995 689999999999
Q ss_pred HHHHHHHh
Q 038416 376 IKAFCQRH 383 (387)
Q Consensus 376 l~~~~~~~ 383 (387)
|+++++++
T Consensus 389 l~~~~~~~ 396 (398)
T TIGR03392 389 VGAALELL 396 (398)
T ss_pred HHHHHHHh
Confidence 99988764
No 113
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=1.3e-30 Score=246.58 Aligned_cols=337 Identities=15% Similarity=0.127 Sum_probs=240.6
Q ss_pred CCCCCcHHHHHHHHHHhcC-CC-----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC
Q 038416 22 SLLSDSTVAEDAVVDALRT-AH-----YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
+++..++.+.+++.+++++ +. ...|++..+..+|++.|++++. .++.|++++|.+ ++..++.++++
T Consensus 120 lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~~-a~~sai~a~~~ 191 (481)
T PLN02822 120 LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGLS-TIFSVIPAFCK 191 (481)
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHHH-HHHHHHHHhCC
Confidence 4777899999999999986 21 1135555568999999999983 346788888766 67889999999
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCc-eEEEEeCCCCCccccCCHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENT-VAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
+||.|++....|.++...+. ..+.+++.++.++.+++..+++++++... +++ ++|++..+++++|.++| +++
T Consensus 192 ~gd~Ii~d~~~H~s~~~~~~--ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~ 266 (481)
T PLN02822 192 KGDIIVADEGVHWGIQNGLY--LSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDE 266 (481)
T ss_pred CCCEEEEeCCccHHHHHHHH--HcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHH
Confidence 99999998888877777777 77888888876533333333333332221 234 67777788899999988 799
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccc--cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGV--FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~ 250 (387)
|.++|++||+++|+||+|+...++..+...... +...+..++++||+|++++.| ||+++++ ++++.+
T Consensus 267 i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~--------~ii~~~ 335 (481)
T PLN02822 267 IVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA--------RVVDHQ 335 (481)
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH--------HHHHHH
Confidence 999999999999999999965555222211111 222345688999999998888 9999876 677777
Q ss_pred Hhhh-hccCC--cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 251 KGCL-NAASH--PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 251 ~~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+... ...++ .++..+.++.++|+.. +. ..+..++++++++++++.|++.+++.+ ..+..++++++.++......
T Consensus 336 ~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~~spi~~l~l~~~~~~~ 412 (481)
T PLN02822 336 RLSSSGYVFSASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSI-GSNTLSPIVFLHLEKSTGSA 412 (481)
T ss_pred HhcCCceeeccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCCCEEEEEeCCCcccc
Confidence 6443 22333 3456667766677542 22 256778899999999999998777774 35677888888886320000
Q ss_pred CCc---HHHHHHHHHHhcCeEEEcCC--ccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 328 IGD---DLEFCLKLAKEESVIILPGR--TVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 328 ~~~---~~~~~~~ll~~~gi~v~~g~--~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
..+ ..+++..+++++||.+.++. .|.. +.++|++++ .++++|++++++|++++++..+
T Consensus 413 ~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 413 KEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred cchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 001 24678888878899999763 2321 357999884 6899999999999999988654
No 114
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.98 E-value=1.3e-29 Score=237.52 Aligned_cols=320 Identities=17% Similarity=0.180 Sum_probs=232.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC-C-------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS-P-------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL--- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~-~-------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l--- 93 (387)
+.|+.+++++.+.+.....+... . .....++|+.++++++. .++++|++|+|++++++.++.++
T Consensus 34 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t~g~t~~l~~~~~~~~~~ 108 (406)
T PRK09295 34 QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFVRGTTEGINLVANSWGNS 108 (406)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEeCCHHHHHHHHHHHhhhh
Confidence 67889999998888642111111 1 11256788888888832 25689999999999999999874
Q ss_pred -cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 94 -ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 94 -~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
.++||+|+++.++|++ +...++ ..|.+++.++++. ++.+|++++++++++++++|++++|+||||..+|
T Consensus 109 ~~~~gd~vl~~~~~~~s~~~~~~~~~~--~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~-- 182 (406)
T PRK09295 109 NVRAGDNIIISEMEHHANIVPWQMLCA--RVGAELRVIPLNP--DGTLQLETLPALFDERTRLLAITHVSNVLGTENP-- 182 (406)
T ss_pred cCCCcCEEEECcchhhHHHHHHHHHHH--HcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEEEecchhcccccCC--
Confidence 5789999999998864 455566 7899999998753 4468999999999889999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|.++|+++|+++|+|++|+... ...++..... .+++.|++|.+|++| +|++++++ ++.+
T Consensus 183 -~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~--------~~~~ 244 (406)
T PRK09295 183 -LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQALDC---DFYVFSGHKLYGPTG--IGILYVKE--------ALLQ 244 (406)
T ss_pred -HHHHHHHHHHcCCEEEEEcccccCc----cccCchhcCC---CEEEeehhhccCCCC--cEEEEEch--------HhHh
Confidence 7888889999999999999997532 2233333333 388899999887776 79998875 2322
Q ss_pred HHHh-----------------------hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 249 SIKG-----------------------CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 249 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
.+.. .+.-.++++..+..++.++++...+..++...++.+++++++++.|.+++++.
T Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 245 EMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred hCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 2210 00113467777788888887765555567777888889999999998888877
Q ss_pred CCCCCC-ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------CCCeEEEEee--CChHhHHHHHH
Q 038416 306 CPVKPQ-GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------MKNWLRIAFA--AEPATLEDGLE 374 (387)
Q Consensus 306 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~~Ri~~~--~~~e~~~~~~~ 374 (387)
+. .|. ....+.+.++. .+..++.. .+.++||.+..|..+. .++++|+|++ ++++|++.+++
T Consensus 325 ~~-~~~~~~~iv~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~ 396 (406)
T PRK09295 325 LY-GPQNRLGVIAFNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVA 396 (406)
T ss_pred Ee-CCCCCceEEEEEECC------cCHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHH
Confidence 54 332 12233444442 13445555 4578899999887543 2468999995 58999999999
Q ss_pred HHHHHHH
Q 038416 375 RIKAFCQ 381 (387)
Q Consensus 375 ~l~~~~~ 381 (387)
.|+++.+
T Consensus 397 ~l~~i~~ 403 (406)
T PRK09295 397 GLQRIHR 403 (406)
T ss_pred HHHHHHH
Confidence 9988654
No 115
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.98 E-value=2.2e-29 Score=236.14 Aligned_cols=321 Identities=19% Similarity=0.214 Sum_probs=230.6
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC-C-------CCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS-P-------TLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~-~-------~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
++|+.+.+++.+.+.....+... . .....++|+.++++++ .+ +++|++++|+++++..++.++
T Consensus 29 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~~~~g~t~~l~~~~~~~~~ 102 (403)
T TIGR01979 29 QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIVFTRGTTESINLVAYSWGD 102 (403)
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 57788999998877542111010 0 1135588889999883 44 679999999999999998875
Q ss_pred --cCCCCeEEEcCCCCcch----HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 94 --ARPGANILIPRPGYPLY----EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 --~~~g~~vl~~~p~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++||+|+++++.|++. ...+. ..|.++..++++ .++.+++++++++++++++++++++++||||..+|
T Consensus 103 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~--~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~- 177 (403)
T TIGR01979 103 SNLKAGDEIVISEMEHHANIVPWQLLAE--RTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNP- 177 (403)
T ss_pred hcCCCCCEEEECcchhhHHHHHHHHHHH--hcCcEEEEEecC--CCCCCCHHHHHHHhccCCeEEEEEcccccccccCC-
Confidence 57899999999988763 45556 689999999875 34568999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.++|+++|+++|+|++|+.. .....+..+. ..+++.|++|.+|++| +|++++++ +++
T Consensus 178 --~~~i~~~~~~~~~~~ivD~a~~~g----~~~~~~~~~~---~d~~~~s~~K~~gp~G--~g~l~~~~--------~~~ 238 (403)
T TIGR01979 178 --VEEIAKLAHQVGAKVLVDGAQAVP----HMPVDVQALD---CDFYVFSGHKMYGPTG--IGVLYGKE--------ELL 238 (403)
T ss_pred --HHHHHHHHHHcCCEEEEEchhhcC----ccccCccccC---CCEEEEecccccCCCC--ceEEEEch--------HHH
Confidence 788889999999999999999752 2222233332 3488899999987666 89998865 333
Q ss_pred HHHHhh---------------------hh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 248 DSIKGC---------------------LN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 248 ~~~~~~---------------------~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+.+... .. ..++++.....++.++++...+..+++..++..+.++.+.+.|+.+++++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 239 EQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred hcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 333211 00 01245555666666666644344466778888889999999998888887
Q ss_pred CCCCCC----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc--------cCCCCeEEEEee--CChHhHHH
Q 038416 306 CPVKPQ----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT--------VGMKNWLRIAFA--AEPATLED 371 (387)
Q Consensus 306 ~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--------~~~~~~~Ri~~~--~~~e~~~~ 371 (387)
+. .|. .+.++.+.++. .+..++.. .++++||.+.+|.. ++.++++|||++ ++++|+++
T Consensus 319 ~~-~~~~~~~~~~~v~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~ 390 (403)
T TIGR01979 319 IY-GPRDAEDRGGIISFNVEG------VHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDA 390 (403)
T ss_pred Ee-CCCCccccCceEEEEeCC------cCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHH
Confidence 54 332 13455555542 13445554 55778999988753 334678999996 48899999
Q ss_pred HHHHHHHHHHHh
Q 038416 372 GLERIKAFCQRH 383 (387)
Q Consensus 372 ~~~~l~~~~~~~ 383 (387)
+++.|+++++.+
T Consensus 391 l~~~l~~~~~~~ 402 (403)
T TIGR01979 391 LVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHh
Confidence 999999887754
No 116
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=1.5e-29 Score=233.52 Aligned_cols=320 Identities=16% Similarity=0.108 Sum_probs=228.6
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHHHHHhhcCCCCeEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPT-LGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVLARPGANIL 101 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~g~~vl 101 (387)
.++|+.+.+++.+.... ..|+.. .-..++++.+++++ ++++ +.+++++|+++++..++.+++++||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 47889999988765422 122221 11456677777777 3434 4577888899999999999999999999
Q ss_pred EcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 102 IPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 102 ~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
++.++|++ +...++ ..|.+++.++.++ ++.+|++++++++++ ++++|++++|+||+|..++ +++|.++|+
T Consensus 79 ~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~ 151 (356)
T cd06451 79 VGVNGVFGDRWADMAE--RYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAK 151 (356)
T ss_pred EecCCchhHHHHHHHH--HhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHH
Confidence 99988876 456677 7899999998753 357899999999987 8999999999999999988 677888889
Q ss_pred hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh---hh-
Q 038416 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG---CL- 254 (387)
Q Consensus 179 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~---~~- 254 (387)
++|+++|+|++++. |....++..... .+++.|.+|+++.+ .++||++.++ ++++.+.. ..
T Consensus 152 ~~~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~ 215 (356)
T cd06451 152 KHDALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKG 215 (356)
T ss_pred hcCCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCc
Confidence 99999999999873 111222222222 26677899997654 3589999875 45555542 00
Q ss_pred ----------------hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEE
Q 038416 255 ----------------NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFV 316 (387)
Q Consensus 255 ----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~ 316 (387)
....+++...+.++.++++...+..+++..++..++++++.+.|+++ +++....+. .+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 294 (356)
T cd06451 216 FYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVT 294 (356)
T ss_pred eeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceE
Confidence 11224455555666666665455667778888889999999999887 676442222 33445
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
|+.++.. .+..+++..+.+++||.+.+|..+..++++|++++ +++++++++++.|+++++
T Consensus 295 ~~~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 295 AVLVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred EEECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 6665431 24567777775545999999876555679999995 579999999999988763
No 117
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=4.3e-29 Score=235.21 Aligned_cols=325 Identities=17% Similarity=0.212 Sum_probs=235.1
Q ss_pred CCcHHHHHHHHHHhcCCCCC-----CCCC---CCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHYN-----CYSP---TLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-----~y~~---~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
+.|+.+++++.+.+.....+ +|.. .....++|+.++++++ +. +++|++|+|+++++..+++++
T Consensus 43 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g~t~al~~i~~~~~~ 116 (424)
T PLN02855 43 QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIVFTRNATEAINLVAYTWGL 116 (424)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEEeCCHHHHHHHHHHHhhh
Confidence 67888999998877542111 1110 1124688889999884 43 579999999999999999863
Q ss_pred --cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 94 --ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 --~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++||+|+++.+.|++ +...++ ..|.++..++++.+ ..+|++++++++++++++|++++++||||..+|
T Consensus 117 ~~~~~gd~vl~~~~~~~s~~~~~~~~a~--~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~- 191 (424)
T PLN02855 117 ANLKPGDEVILSVAEHHSNIVPWQLVAQ--KTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLVATHHVSNVLGSILP- 191 (424)
T ss_pred hcCCCcCEEEECCCccHHHHHHHHHHHH--HcCCEEEEEecCCC--CCcCHHHHHHHhccCceEEEEeCccccccccCC-
Confidence 5789999999998875 455566 78999999987543 358999999999889999999999999999998
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|+++|+++|+++|+|++|+. +.....+..+.. .+++.|++|.+|++| +|++++++ +++
T Consensus 192 --~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l~~~~--------~~~ 252 (424)
T PLN02855 192 --VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGA---DFLVASSHKMCGPTG--IGFLWGKS--------DLL 252 (424)
T ss_pred --HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCC---CEEEeecccccCCCc--cEEEEEch--------hhh
Confidence 67888899999999999999963 222223333333 378999999877666 89999875 233
Q ss_pred HHHHhh---------------------h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 248 DSIKGC---------------------L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 248 ~~~~~~---------------------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+.+... . .-.++++.....++..+++...+..++++.++..+.++.+++.|++++++.
T Consensus 253 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~ 332 (424)
T PLN02855 253 ESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVR 332 (424)
T ss_pred hcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 322111 0 012345666677777777655455678888889999999999998888877
Q ss_pred CCCCCC-----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------CCCCeEEEEee--CChHhHH
Q 038416 306 CPVKPQ-----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV--------GMKNWLRIAFA--AEPATLE 370 (387)
Q Consensus 306 ~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~~Ri~~~--~~~e~~~ 370 (387)
+..... .+.++.+.++. .+..++...|.+++||.+..|..+ +.++++|+|++ ++++|++
T Consensus 333 i~~~~~~~~~~r~~~v~~~~~~------~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~ 406 (424)
T PLN02855 333 IYGPKPSEGVGRAALCAFNVEG------IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVD 406 (424)
T ss_pred EeCCCcccccCcccEEEEEECC------cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHH
Confidence 442211 13355555542 134566666645559999987654 23578999995 6899999
Q ss_pred HHHHHHHHHHHHhhh
Q 038416 371 DGLERIKAFCQRHAK 385 (387)
Q Consensus 371 ~~~~~l~~~~~~~~~ 385 (387)
++++.|+++++.++.
T Consensus 407 ~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 407 AFIHALKDTIAFFSS 421 (424)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 118
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=1.1e-28 Score=230.71 Aligned_cols=328 Identities=16% Similarity=0.087 Sum_probs=229.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCC---Cc----HHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTL---GV----PSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
.+++.+.++ +++++.+|.+.+++.+++.... .+|+... |. .+||+.+|++++ .+++++++|
T Consensus 39 ~~i~~~~~~---~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii~~~ 106 (393)
T TIGR01822 39 EVLNFCANN---YLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTILYAS 106 (393)
T ss_pred eEEEeeCCC---ccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEEECc
Confidence 345555553 4588899999999999987522 2454443 54 788999999983 357788889
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEe
Q 038416 82 CSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVII 155 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~ 155 (387)
+++|+..++.+++++||.|+++.|+|.++...++ ..+.+...++ ..|++++++++++ ++++|++.
T Consensus 107 ~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~--~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~ 177 (393)
T TIGR01822 107 CFDANGGLFETLLGAEDAIISDALNHASIIDGVR--LCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIATD 177 (393)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH--hcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEe
Confidence 9999999999999999999999999999888777 7776654432 2588898888764 67788888
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC--CCccccccCCCccEEEEecCcccccccccceEEEE
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST--PYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
+++||||.+.+ +++|+++|++||+++|+|++|+....... .......+. .+..++++|+||++ +|+|+||++
T Consensus 178 ~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~~ 251 (393)
T TIGR01822 178 GVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFTT 251 (393)
T ss_pred CCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEEE
Confidence 88999999976 88999999999999999999963222211 111111111 13458899999985 467999999
Q ss_pred eeCCCCcccchhHHHHHHhhh-h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGCL-N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+++ ++++.++... . ...+.++..+.++.++++.. ...++..++++++++++.+.|++. ++.+. .+
T Consensus 252 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 319 (393)
T TIGR01822 252 ARK--------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PA 319 (393)
T ss_pred eCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CC
Confidence 875 6777776532 1 22233444445555555432 224567788889999999999876 67633 33
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
. +.++.+.++.. .+..++...|++ +||.+. +..|. ....+|++++ .+++++++++++|++++++.
T Consensus 320 ~-~~~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 320 D-HPIIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred C-CCEEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 33444444321 134567777755 599987 44442 1246999884 57999999999999987754
No 119
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=5.6e-29 Score=230.22 Aligned_cols=327 Identities=14% Similarity=0.092 Sum_probs=227.9
Q ss_pred cccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC--CCCC----CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 038416 5 KGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY--NCYS----PTLGVPSARRGIADYLNRDLPYKLSPEDVYL 78 (387)
Q Consensus 5 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~----~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~ 78 (387)
.|++ +++++.|++ .+++.++.+.+++++++..... ..|. ......++++.++++++ .++.+++
T Consensus 14 ~g~~-~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~ 82 (360)
T TIGR00858 14 DGRR-LLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLF 82 (360)
T ss_pred CCce-EEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEE
Confidence 3444 455555542 2556779999999998865111 1111 11234557777777763 3456777
Q ss_pred cCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEE
Q 038416 79 TLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVI 154 (387)
Q Consensus 79 ~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l 154 (387)
++| ++++..++.+++++||+|+++.|+|..+...+. ..|.++..++. .|++.+++.++. +++++++
T Consensus 83 ~~G-~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~ 152 (360)
T TIGR00858 83 SSG-YLANVGVISALVGKGDLILSDALNHASLIDGCR--LSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVT 152 (360)
T ss_pred Cch-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH--hcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEE
Confidence 776 455556778888999999999999999988888 88888877653 478888888754 4677888
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC--ccccccCCCccEEEEecCcccccccccceEEE
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY--VPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
.+++|+||...+ +++|.++|+++|+++|+||+|+.+.++.... .....+..++++++++|+||+|+++| ||+
T Consensus 153 ~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~ 226 (360)
T TIGR00858 153 DGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYV 226 (360)
T ss_pred eCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEE
Confidence 888999998866 7889999999999999999998655443211 22222334467899999999998766 999
Q ss_pred EeeCCCCcccchhHHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
++++ ++++.+..... ...+.++..+.++.++++... ......+++.++++.+.+.|+++ ++. + .
T Consensus 227 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~ 293 (360)
T TIGR00858 227 AGSQ--------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFT-L-M 293 (360)
T ss_pred EcCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCc-c-C
Confidence 8865 67776654322 122344555555556665322 23456788999999999999987 566 3 3
Q ss_pred CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHH
Q 038416 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIK 377 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~ 377 (387)
+..++++|+.++.. .+..++...+ .++||.+.++..+.. .+++||+++ .++++++.++++|+
T Consensus 294 ~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 294 PSCTPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 55677888887531 1345676666 566999988655432 468999996 48999999998763
No 120
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=1.5e-28 Score=227.11 Aligned_cols=323 Identities=13% Similarity=0.116 Sum_probs=221.7
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCC----CC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCY----SP---TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y----~~---~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
-.+...+.+++.+........++ .. ......+++.+|++++ .+.+.+++|+++++..++.+++++
T Consensus 18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~~~ 89 (370)
T TIGR02539 18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALCKE 89 (370)
T ss_pred CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhhCC
Confidence 35777788888776543211111 10 1135677888888882 346777899999999999999999
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-------CceEEEEeCCCCCccccCCHHH
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-------NTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~l~~p~nptG~~~~~~~ 169 (387)
||.|+++.+.|++....++ ..|.+++.++.+.+.++.+|++++++++++ ++++|++++|+||+|...+
T Consensus 90 gd~Vl~~~~~h~s~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~--- 164 (370)
T TIGR02539 90 GDWVVLDGLAHYTSYVAAE--RAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD--- 164 (370)
T ss_pred CCEEEECCcccHHHHHHHH--HcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---
Confidence 9999999999877767778 899999999976555678999999998853 6789999999999999876
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|+++|+++|+++|+|++|+.... ..+..... ..++++|++|+++ ++.|+||+++++ ++++.
T Consensus 165 l~~i~~la~~~~~~livDea~~~g~~----~~~~~~~~---~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~ 228 (370)
T TIGR02539 165 AGKVAKVCREKGVPLLLNCAYTVGRM----PVSAKEIG---ADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDI 228 (370)
T ss_pred HHHHHHHHHHcCCeEEEECccccCCc----CCCHHHcC---CCEEEeeCccccc-CCCCEEEEEECH--------HHHhh
Confidence 77888899999999999999996321 11111222 2377799999987 466799999876 67777
Q ss_pred HHhhhh-cc--------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEEe
Q 038416 250 IKGCLN-AA--------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP-VKPQGAMFVMVK 319 (387)
Q Consensus 250 ~~~~~~-~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~g~~~~~~ 319 (387)
++.... +. .+.....+.++..++.. ..+++.+..+.+.. ++++++.|+++ ++..+ ..|..++|++++
T Consensus 229 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~ 305 (370)
T TIGR02539 229 VLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH-VVERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFE 305 (370)
T ss_pred hcccccCCccceeeeecccccccHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEE
Confidence 765432 10 11111133344444432 12344444344443 45788999888 66632 246678888887
Q ss_pred cCccc---ccCCCcHHHHHHHHHHhcCeE-EEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHHHHh
Q 038416 320 LNVSM---LEDIGDDLEFCLKLAKEESVI-ILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 320 ~~~~~---~~~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~~~~ 383 (387)
++... .........+.+.| .++||. +.+| .++++|+++ +.++++++++++.|+++++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 306 TPGFHEIAQKHKRRGYFLYEEL-KKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred CCchhHHhhhhccccHHHHHHH-HhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 75210 00001223455554 667997 5553 356999997 568999999999999888764
No 121
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=4.8e-29 Score=227.82 Aligned_cols=310 Identities=15% Similarity=0.134 Sum_probs=214.0
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
++...+++|.+.+++.+.... ...|++.....+|++.++++++ . +.+++++|+++++..++.+++++||+
T Consensus 6 ~~~~~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g------~--~~~~v~~~g~~a~~~~l~~~~~~gd~ 75 (333)
T PRK10534 6 SDTVTRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSG------K--EAALFLPTGTQANLVALLSHCERGEE 75 (333)
T ss_pred cccCCCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhC------C--CeEEEeCchHHHHHHHHHHhcCCCCe
Confidence 444556889999999875543 3468655688999999999983 2 45567777888888888888999999
Q ss_pred EEEcCCCCcc-hHHH-hhccCCC-ceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHH
Q 038416 100 ILIPRPGYPL-YEIH-AAGSNNN-LEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 100 vl~~~p~~~~-~~~~-~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
|+++.|+|.. +... .. ..+ .++..+++. .++.+|+++|++++++ ++++|++++|+ +|.+++.+++
T Consensus 76 vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l 149 (333)
T PRK10534 76 YIVGQAAHNYLYEAGGAA--VLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYL 149 (333)
T ss_pred eEEechhhhhHhcCCchH--HhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHH
Confidence 9998888853 3211 22 333 566666653 4578899999999876 58899999766 5999999999
Q ss_pred HHHHHHHHhcCcEEeeccccccccc--CCCCCccccccCCCccEEEEecCcccccccccceE-EEEeeCCCCcccchhHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAF--GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG-WLVTSDPNGILQNSGFV 247 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G-~i~~~~~~~~~~~~~~~ 247 (387)
++|+++|+++++++|+||+|..... .+.. ...+....+.+ +.||||.|+++ +| |+++++ +++
T Consensus 150 ~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~~--------~~i 214 (333)
T PRK10534 150 KQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSF-TICLSKGLGTP---VGSLLVGNR--------DYI 214 (333)
T ss_pred HHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEE-EEEeEcCCCCc---ccceEEcCH--------HHH
Confidence 9999999999999999999873211 0111 11111111222 34899998764 67 576654 788
Q ss_pred HHHHhhhhccC-C--cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 248 DSIKGCLNAAS-H--PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 248 ~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+.+++...... + .+.+.+.++...+++ ..+..++..++++++.+.|+++ |+. +..| .++|+|++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv~~~~~~-- 284 (333)
T PRK10534 215 KRARRWRKMTGGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNMLFVRVGE-- 284 (333)
T ss_pred HHHHHHHHHhCCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEEEEECCc--
Confidence 88877654221 1 223445554444432 1233344555678888999988 777 4244 68999998862
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++ .++++++||.+.|+. ++|++.+ .+++++++++++|++.+.
T Consensus 285 ----~~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 285 ----EQAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ----hhHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 123445 456678899998873 5788774 689999999999987664
No 122
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=2.5e-28 Score=228.78 Aligned_cols=334 Identities=14% Similarity=0.050 Sum_probs=230.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY--NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++.+.|+ +++++.++.+.+++++++..... ..+....|..++++.+++++.+.++. +++|++|+| ++++
T Consensus 43 ~~i~l~~~~---~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~ 115 (397)
T PRK06939 43 EVINFCANN---YLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDAN 115 (397)
T ss_pred eEEEeeccC---ccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHH
Confidence 345665554 24888999999999999875321 12222457788888888888887662 367777777 7789
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNP 160 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~np 160 (387)
..++.+++++||.|++++|+|+++...+. ..+.++..++. .|++++++.+++ ++++|+..+.+|+
T Consensus 116 ~~~~~~l~~~gd~vi~~~~~~~~~~~~~~--~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~ 186 (397)
T PRK06939 116 GGLFETLLGKEDAIISDALNHASIIDGVR--LCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSM 186 (397)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHH--hcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCC
Confidence 99999999999999999999999888888 88888776653 367888877653 5666766667899
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
+|.. +++++|.++|+++|+++|+|++|+...+. +........+. .+..++++|+||++ +|.|+||+++++
T Consensus 187 ~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~-- 258 (397)
T PRK06939 187 DGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK-- 258 (397)
T ss_pred CCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH--
Confidence 9986 44899999999999999999999632221 11111111221 13458999999997 356899999875
Q ss_pred CcccchhHHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 239 GILQNSGFVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
++++.+..... ...++++..+.++.++++... ...+..+++.++++.+.+.|+++ ++... .+.++ +
T Consensus 259 ------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~-~ 327 (397)
T PRK06939 259 ------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHP-I 327 (397)
T ss_pred ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCC-E
Confidence 67777765422 122333444454544454321 12466778888999999999887 66633 44444 4
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC---CCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG---MKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+++.++.. .+..+++..++++ ||.+.++.+.. ...++|++++ .+++++++++++|++++++.
T Consensus 328 ~~~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 328 IPVMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred EEEEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 33334321 1356777777665 99988643221 1368999983 58999999999999988764
No 123
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=229.72 Aligned_cols=335 Identities=13% Similarity=0.139 Sum_probs=227.9
Q ss_pred cccCCCCCCCCCCCCCCC-cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSD-STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.+++..-|.+.. .++. +|.+.+++++++..... . ......++++.+++++.+.. ..+++++++|+++|+.
T Consensus 40 ~~iD~~~g~~~~--~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 40 EYLDFLAGIAVN--NLGHCHPKLVEAIQEQAAKLIH--T-SNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAEANE 110 (396)
T ss_pred EEEECCccHHhc--cCCCCCHHHHHHHHHHHhhccc--c-ccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHHHHH
Confidence 455655554422 2343 68999999998875311 1 11123577888888887653 3479999999999999
Q ss_pred HHHHhhcCCC-------CeEEEcCCCCcchHHHhhccCCCcee-e---eeccCCCCCc----cCChhhHHHhhccCceEE
Q 038416 88 ISLSVLARPG-------ANILIPRPGYPLYEIHAAGSNNNLEA-R---HYDLLPEKRW----EVDLDGVEALADENTVAI 152 (387)
Q Consensus 88 ~~~~~l~~~g-------~~vl~~~p~~~~~~~~~~~~~~g~~~-~---~~~~~~~~~~----~~~~~~l~~~~~~~~~~v 152 (387)
.+++.+...+ ++|++..++|+++..... ..+... . ..++. .++ ..|++++++++.+++++|
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~v 186 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATL--SATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAV 186 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHH--HhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEE
Confidence 9999775322 679999999988765544 332211 1 11111 111 128899999998788999
Q ss_pred EEeCCCCCcc-ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 153 VIINPGNPCG-NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 153 ~l~~p~nptG-~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
++..++||+| ..++++.+++|.++|+++|+++|+||+|+++.+.+... .+..+....+ +.++||.++ +|+|+||
T Consensus 187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLF-AYQHYGIEPD---IMTLAKGLG-GGVPIGA 261 (396)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCcee-eehhcCCCCC---EEEEcchhh-CCcccEE
Confidence 9988899999 68899999999999999999999999999887665322 2212222222 347999987 8999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
+++++ ++++.+.... ..+++.+++.+.++.++|+...+ ...++..+.....++.+.+.+.++|.+. . .
T Consensus 262 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~ 331 (396)
T PRK02627 262 VLAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-V 331 (396)
T ss_pred EEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-e
Confidence 99976 6777665432 24567888999998888875332 2223333333333344444433343333 1 2
Q ss_pred CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+..|.++|+.++. +..++...+++ +||.+.|+. .+++|+++ ..+++++++++++|+++++++
T Consensus 332 ~~~g~~~~i~~~~-------~~~~~~~~l~~-~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 332 RGLGLMIGIELDR-------PAAEIVKKALE-KGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ccCcEEEEEEecC-------cHHHHHHHHHH-CCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 3457788888742 45677777755 499999864 47899987 468999999999999998764
No 124
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.8e-28 Score=229.94 Aligned_cols=323 Identities=15% Similarity=0.107 Sum_probs=220.4
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHY------NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.+++.+|.+.+++.+++..-.. ..|+......+|++.+++++ + .++.+++++ |++++..++..+
T Consensus 55 ~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g-~~~~i~~~s-G~~a~~~~i~~l 126 (410)
T PRK13392 55 DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------G-KESALLFTS-GYVSNDAALSTL 126 (410)
T ss_pred CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------C-CCCEEEECc-HHHHHHHHHHHH
Confidence 455788999999999998865211 12322224678889999888 2 234555555 567888888776
Q ss_pred cC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh----ccCceEEEEeCCCCCccccCCH
Q 038416 94 AR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA----DENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 ~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.. +|+.|+++...|.++...+. ..|.++..++. + |.+.+++.+ .+++++|++++|+||||.+++
T Consensus 127 ~~~~~g~~vi~~~~~h~s~~~~~~--~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~- 196 (410)
T PRK13392 127 GKLLPGCVILSDALNHASMIEGIR--RSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP- 196 (410)
T ss_pred hcCCCCCEEEEehhhhHHHHHHHH--HcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc-
Confidence 53 78888887778888777777 78888766542 1 334444433 347889999999999999988
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++|.++|+++|+++|+||+|+...++..+......... +...++++|+||+|+++| ||+++++ ++
T Consensus 197 --l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~--------~~ 263 (410)
T PRK13392 197 --IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA--------DL 263 (410)
T ss_pred --HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCH--------HH
Confidence 888888999999999999999943332221111111111 112378899999998887 8998764 67
Q ss_pred HHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 247 VDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 247 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++.+++... .+.+.+++.+.++.++|+... ......++++++++++++.|+++ ++.+. .+. +.++.+.++..
T Consensus 264 ~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-~~~~~i~~~~~ 338 (410)
T PRK13392 264 IDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIPVM-PSP-SHIVPVMVGDP 338 (410)
T ss_pred HHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCC-CCEEEEEeCCH
Confidence 777765542 233455567777777776532 22345577888899999999887 67733 343 44444444321
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
....++...|++++||.+.++..... ..++||++. .++++++++++.|.++++++
T Consensus 339 -----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 339 -----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred -----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 12346777777778999998644322 368999994 68999999999999887653
No 125
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=2.9e-28 Score=227.14 Aligned_cols=335 Identities=12% Similarity=0.108 Sum_probs=220.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+.|+.-|.-..+.++ .+|.+.+++++++.... ..+.. ...+....+++.+.+.. ..+++++++|+++|++.
T Consensus 32 ~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~~ 103 (389)
T PRK01278 32 RYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLW--HVSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAEAVEC 103 (389)
T ss_pred EEEECCccHhhccCCC-CCHHHHHHHHHHHHhcC--ccccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHHH
Confidence 4555544433334455 68899999999987521 11111 11233344455444322 34689999999999999
Q ss_pred HHHhh----cCCCC----eEEEcCCCCcchHHHhhccCCCceeeeecc--CCCCCcc----CChhhHHHhhccCceEEEE
Q 038416 89 SLSVL----ARPGA----NILIPRPGYPLYEIHAAGSNNNLEARHYDL--LPEKRWE----VDLDGVEALADENTVAIVI 154 (387)
Q Consensus 89 ~~~~l----~~~g~----~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~----~~~~~l~~~~~~~~~~v~l 154 (387)
+++++ ..+|| +|++.+++|+++..... ..+........ ....++. .|++++++++++++++|++
T Consensus 104 al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~aviv 181 (389)
T PRK01278 104 AIKTARRYHYGKGHPERYRIITFEGAFHGRTLATI--AAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILI 181 (389)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHH--hccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEE
Confidence 99886 34555 89999999998765555 43332222110 0011111 4789999999878888888
Q ss_pred eCCCCCcc-ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEE
Q 038416 155 INPGNPCG-NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 155 ~~p~nptG-~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
..++|++| ..+|.+++++|.++|++||+++|+||+|.++.+.+..... ...+.++ +.++||.++ +|+|+||+
T Consensus 182 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd-----i~t~sK~l~-~G~~ig~~ 255 (389)
T PRK01278 182 EPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD-----IMAVAKGIG-GGFPLGAC 255 (389)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC-----EEEEehhcc-CCcceEEE
Confidence 87788898 7889999999999999999999999999988766542221 1122222 458999976 88999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK----EIPCITCP 307 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 307 (387)
++++ ++.+.+.... ..+++.+++.++++.+.|+...+..+ .+.++++.+.+.+.|+ .++++...
T Consensus 256 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 324 (389)
T PRK01278 256 LATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGF---LDNVQRMGLYLKQKLEGLVDRFPDVIEE 324 (389)
T ss_pred EEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 9976 5666665443 24567888899988777764322211 2222333333333332 23322111
Q ss_pred CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 308 VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
....|.++++.+.. +..++...++++ ||.+.|+. .+++|+++ ..+++++++++++|.++++++
T Consensus 325 -v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 325 -VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred -EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 23356777777642 456777777655 99999874 57899997 368999999999999988653
No 126
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=4.4e-28 Score=226.29 Aligned_cols=332 Identities=16% Similarity=0.085 Sum_probs=222.4
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH--YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
+.+++.+.+. .++++++|.+.+++++++..-. ...|....+...+++.+++.+.+.++ . ++.+++++++++
T Consensus 39 ~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~-~~~i~~~~g~~~ 111 (385)
T PRK05958 39 RRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---A-ERALLFSSGYAA 111 (385)
T ss_pred ceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---C-CcEEEECcHHHH
Confidence 4556665543 2356678999999999887521 11122222333444444444444333 2 344555556677
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC---ceEEEEeCCCCCcc
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN---TVAIVIINPGNPCG 162 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~nptG 162 (387)
+..++..++++||.|+++.|.|+.+...+. ..|.++..++. .|++.+++.+++. +.++++.+++|++|
T Consensus 112 ~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 112 NLAVLTALAGKGDLIVSDKLNHASLIDGAR--LSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHhCCCCCEEEEeCccCHHHHHHHH--hcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 777778889999999999999999888888 88888887764 2778888888652 45556566789999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
...+ +++|.++|+++|+++|+|++|+.+.+. +........+....+++++.|+||+++.+| ||+++++
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~---- 252 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE---- 252 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence 8855 889999999999999999999764443 222211112333456799999999998766 8888764
Q ss_pred ccchhHHHHHHhhh-h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 241 LQNSGFVDSIKGCL-N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 241 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++.+.+.+.. . .+.++++....++.++++..... ....+++.++++.+.+.|+++ ++. +..+ .+.+++
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~-~~~~~~ 323 (385)
T PRK05958 253 ----TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQ-LMDS-QSAIQP 323 (385)
T ss_pred ----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCC-cCCC-CCCEEE
Confidence 5666664332 1 22334555555565666542211 456678888888999999887 566 3244 455677
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC---CCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG---MKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
+.++.. .+..++...+ .++||.+.++..+. ..+++||+++ .+++++++++++|++++
T Consensus 324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 776531 1345677766 56699998754432 2468999996 58999999999997753
No 127
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=5e-28 Score=225.72 Aligned_cols=332 Identities=14% Similarity=0.117 Sum_probs=232.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++++.++ +++++.++.+.+++.+++... ....|....|..++++.+++++.+.++ .++.+++++| ++++
T Consensus 34 ~~id~~~~~---~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG-~~a~ 106 (385)
T TIGR01825 34 EVINLSSNN---YLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSG-FNTN 106 (385)
T ss_pred eEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-HHHH
Confidence 344555543 248889999999999988742 233566677889999999999988766 2356777766 6677
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEEeCCCCCcc
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVIINPGNPCG 162 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG 162 (387)
..++.+++++||.|+++.|.|.++...+. ..|.++..++ .+|++++++.+.+ +++++++.+++||||
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~~~~--~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG 177 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIIDGLR--LTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDG 177 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHHHHH--hcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCC
Confidence 78888889999999999999998877777 7777766543 3577778776643 577888888899999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc--cccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV--PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
...+ +++|.++|++||+++|+|++|+.+.++..... ...... .+.++++.|+||+++++| ||+++++
T Consensus 178 ~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~---- 246 (385)
T TIGR01825 178 DVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK---- 246 (385)
T ss_pred CccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH----
Confidence 9877 78899999999999999999987654321111 111122 346789999999987665 9998765
Q ss_pred ccchhHHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 241 LQNSGFVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 241 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++++.+..... .+...++..+.++.++++...+ ..+..+++.++++.+.+.|+++ ++.+. .+... ++.
T Consensus 247 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~-~~~ 317 (385)
T TIGR01825 247 ----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETP-ITP 317 (385)
T ss_pred ----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCC-EEE
Confidence 67777765421 1223455667777776654221 1235566677888999999887 67733 44433 444
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.++.. .+..+++..++++ ||.+.+ ..|.. ..++|+++ ..+++++++++++|+++++++
T Consensus 318 ~~~~~~-----~~~~~~~~~L~~~-gi~v~~-~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 318 VVIGDE-----KAAQEFSRRLFDE-GIFAQS-IVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred EEECCH-----HHHHHHHHHHHHC-CcEEcc-cCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 444321 1345677777665 998854 33322 36899988 468999999999999988654
No 128
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=7.9e-28 Score=220.95 Aligned_cols=320 Identities=18% Similarity=0.199 Sum_probs=246.2
Q ss_pred CCcHHHHHHHHHHhcCCCC----CCCCC----CCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHY----NCYSP----TLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~----~~y~~----~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
..|..+.+++.+...+... ..+.. ...+++.|+.++++++ .+ .++|++|.|+|++++.+..++
T Consensus 33 ~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 33 QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChhHHHHHHHHHhhh
Confidence 3789999999998764211 12222 1246788899999984 46 589999999999999999999
Q ss_pred -cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 94 -ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 94 -~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
.++||+|++..-.|++ |....+ ..|++++.+|++ +++.++.+.++..++++|++|.+++.+|.||+..|
T Consensus 107 ~~~~gdeIv~s~~EH~sn~~pw~~~~~--~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p-- 180 (405)
T COG0520 107 SLKPGDEIVVSDLEHHSNIVPWQELAK--RTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNP-- 180 (405)
T ss_pred hhcCCCEEEEccCcchhhHHHHHHHHH--hcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEEEEECccccccccch--
Confidence 6899999999999874 667777 789999999986 44578999999999999999999999999999977
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|+++|+++|+++++|.+++. ++.+..+..++.+ +++.|.+|++ |+.| +|++++++ ++.
T Consensus 181 -v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP~G--iGvLy~r~--------~~l 242 (405)
T COG0520 181 -VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGPTG--IGVLYVRK--------ELL 242 (405)
T ss_pred -HHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCCCc--eEEEEEch--------HHH
Confidence 99999999999999999999985 4455556666666 9999999954 4446 89999976 555
Q ss_pred HHHHhh-----------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 248 DSIKGC-----------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 248 ~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
+.+... +.-.++++.....++.++++...+..+..+.++.+.+.+++.+.|+++|++
T Consensus 243 ~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v 322 (405)
T COG0520 243 EELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGV 322 (405)
T ss_pred hhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 554210 011235566666677777776666778889999999999999999999998
Q ss_pred CCCCCCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--------CCeEEEEee--CChHhHHHH
Q 038416 305 TCPVKPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------KNWLRIAFA--AEPATLEDG 372 (387)
Q Consensus 305 ~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~~Ri~~~--~~~e~~~~~ 372 (387)
.+...+. .+..+.+.++. ....++...| .++||.++.|..|.. ...+|+|++ +++||++++
T Consensus 323 ~i~g~~~~~r~~~vsF~v~~------~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l 395 (405)
T COG0520 323 EIYGPPDADRGGIVSFNVKG------IHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRL 395 (405)
T ss_pred EEecCCcccCceEEEEEeCC------CCHHHHHHHH-HhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHH
Confidence 8664442 34444555543 1455666655 566899999977653 345999995 589999999
Q ss_pred HHHHHHHHH
Q 038416 373 LERIKAFCQ 381 (387)
Q Consensus 373 ~~~l~~~~~ 381 (387)
++.|+++.+
T Consensus 396 ~~aL~~~~~ 404 (405)
T COG0520 396 LEALKKALA 404 (405)
T ss_pred HHHHHHHhh
Confidence 999988764
No 129
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=5.1e-28 Score=226.83 Aligned_cols=340 Identities=16% Similarity=0.071 Sum_probs=231.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA------HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
..++.++|.. ++++.+++++.+.+... ....|....+...+++.+++++.+.++. +...|+++ |+
T Consensus 20 ~~~~~~~~~~------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-sg 90 (402)
T cd00378 20 ETLELIASEN------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-SG 90 (402)
T ss_pred hCeeeeccCC------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-Cc
Confidence 3555666544 56899999998765321 1123434445566777666666555553 33445555 56
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHHH-----hhccCCCceeeeeccCCCC-CccCChhhHHHhhc-cCceEEEEe
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEIH-----AAGSNNNLEARHYDLLPEK-RWEVDLDGVEALAD-ENTVAIVII 155 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~-----~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~l~ 155 (387)
++|+..++.+++++||+|+++.|+|.++... ++ ..|.++..+++..+. ++.+|++++++++. +++++++++
T Consensus 91 t~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~ 168 (402)
T cd00378 91 SQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVS--ASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG 168 (402)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCccCcccccccccccc--ccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence 7999999999999999999999999865433 45 577777777665432 57899999999885 578899888
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccc-cccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY-NHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
+|++|+ .. ++++|+++|+++|+++|+|++| .++.+.+....++. .. .++++|+||++ +|+|.||+++
T Consensus 169 ~~~~~~--~~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~---dv~~~s~sK~l--~G~~gg~i~~ 236 (402)
T cd00378 169 ASAYPR--PI---DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA---DVVTTTTHKTL--RGPRGGLILT 236 (402)
T ss_pred CcccCC--Cc---CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC---cEEEeccccCC--CCCCceEEEe
Confidence 888764 33 3889999999999999999996 44444442222332 12 27899999985 7889999998
Q ss_pred eCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 235 SDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
++ +++++++..... ...++......++..++....+....++.+++.++++.+.+.|+++ ++.+...|.+
T Consensus 237 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 308 (402)
T cd00378 237 RK-------GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTD 308 (402)
T ss_pred cc-------HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCC
Confidence 64 246777765432 1222223333343444443223356777888999999999999988 7774434677
Q ss_pred eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC------CCCeEEEEee------CChHhHHHHHHHHHHHH
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG------MKNWLRIAFA------AEPATLEDGLERIKAFC 380 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~~Ri~~~------~~~e~~~~~~~~l~~~~ 380 (387)
++++|++++... .+.. .+..+++++||.+.++.... ...++|+++. .+.++++.+++.|++++
T Consensus 309 ~~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 309 NHLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred CeEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 899999986421 1233 44455688899997643211 2468999993 25899999999999987
Q ss_pred HHhh
Q 038416 381 QRHA 384 (387)
Q Consensus 381 ~~~~ 384 (387)
++-.
T Consensus 384 ~~~~ 387 (402)
T cd00378 384 KDAE 387 (402)
T ss_pred hccc
Confidence 6543
No 130
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=4.6e-28 Score=229.74 Aligned_cols=321 Identities=13% Similarity=0.076 Sum_probs=219.4
Q ss_pred CCcHHHHHHHHHHhcC--CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 25 SDSTVAEDAVVDALRT--AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~--~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
..++.+.+++.+.-.. .....|+......++|+.+|++++ .++.+++++ +..++..++.+++++||.|++
T Consensus 119 ~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~-G~~an~~~i~al~~~Gd~Vi~ 190 (489)
T PLN02483 119 YCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGM-GYATNSTIIPALIGKGGLIIS 190 (489)
T ss_pred HHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECC-HHHHHHHHHHHhCCCCCEEEE
Confidence 3456677776665432 122346666678999999999994 345566655 556667888889999999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-------cC-----ceEEEEeCC-CCCccccCCHHH
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-------EN-----TVAIVIINP-GNPCGNVFSYQH 169 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-----~~~v~l~~p-~nptG~~~~~~~ 169 (387)
++|+|.++...++ ..|++++.++.+ |.+.+++.++ ++ +++++++++ .|++|...+
T Consensus 191 d~~~h~s~~~~~~--~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~--- 258 (489)
T PLN02483 191 DSLNHNSIVNGAR--GSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK--- 258 (489)
T ss_pred cchhhHHHHHHHH--HcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---
Confidence 9999999999999 999999988753 3444444332 22 255666665 589999865
Q ss_pred HHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|+++|++||+++|+||+|+....+ |.+..+....+..+..++++|+||+|++.| ||+++++ +++
T Consensus 259 l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~--------~li 327 (489)
T PLN02483 259 LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSK--------ELI 327 (489)
T ss_pred HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCH--------HHH
Confidence 899999999999999999999843322 222223333333456799999999998877 9999865 788
Q ss_pred HHHHhhhh---ccCCcchHHHHHHHHHhhhc----cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEec
Q 038416 248 DSIKGCLN---AASHPVTFIQAAVPRIVDET----NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 320 (387)
+.++.... .....++....++.+.++.. .+....++.++++++++++++.|+++ ++.+. .+.+++.+++.+
T Consensus 328 ~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~-~~~~sp~~~l~l 405 (489)
T PLN02483 328 QYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVL-GDNDSPVMPIML 405 (489)
T ss_pred HHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCCCEEEEEE
Confidence 88876532 22233334333344444311 12334556788999999999999998 67633 444445555544
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
... .+..++...+++ +||.+.+...... .+.+|++++ .++|++++++++|+++++.+.
T Consensus 406 ~~~-----~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 406 YNP-----AKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred CCH-----HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 321 133467777765 5999987332221 368999995 589999999999999887654
No 131
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=1.1e-27 Score=220.95 Aligned_cols=323 Identities=12% Similarity=0.115 Sum_probs=221.4
Q ss_pred CCCCcHHHHHHHHHHhcCCCC----CC-CC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC
Q 038416 23 LLSDSTVAEDAVVDALRTAHY----NC-YS--PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~----~~-y~--~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
+-|..+.+.+++.+....... .+ .. ......++++.+++++ ++ +++++++|+++++..++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~ 81 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCE 81 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcC
Confidence 678999999999998853211 00 11 1134578889999988 33 7899999999999999999999
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-------cCceEEEEeCCCCCccccCCHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-------ENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+||+|+++.++|++....+. ..|++++.++.+...++.+|+++++++++ ++++++++++|+||||...+
T Consensus 82 ~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~-- 157 (361)
T cd06452 82 KGDWVVVDGLAHYTSYVAAE--RAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD-- 157 (361)
T ss_pred CCCEEEEcCCcchHHHHHHH--hcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc--
Confidence 99999999999988777788 89999999998654456899999999886 36889999999999998855
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|.++|+++|+++|+|++|+... ...+...++ ..++++|++|+++ ++.|+||+++++ ++++
T Consensus 158 -~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~l~-~~~~~G~l~~~~--------~~~~ 220 (361)
T cd06452 158 -AKKIAKVCHEYGVPLLLNGAYTVGR----MPVSGKELG---ADFIVGSGHKSMA-ASAPIGVLATTE--------EWAD 220 (361)
T ss_pred -HHHHHHHHHHcCCeEEEECCcccCC----cCCCHHHcC---CCEEEecCCcccc-CCCCeEEEEECH--------HHHH
Confidence 8899999999999999999998421 111122222 3488999999986 445999999875 6777
Q ss_pred HHHhhhhc---------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEE
Q 038416 249 SIKGCLNA---------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPV-KPQGAMFVMV 318 (387)
Q Consensus 249 ~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~~~~ 318 (387)
++.+.... ..+.......++...+... .+.+++ ..+..++++++++.|++++++.++. .+...+++.+
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~ 298 (361)
T cd06452 221 IVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFF 298 (361)
T ss_pred HHhccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEE
Confidence 77554321 0111111233333333321 122332 3333345578889999988877431 2334556666
Q ss_pred ecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHH
Q 038416 319 KLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 319 ~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~ 380 (387)
+.+.... .......++...| .++||.+.. .+..+++|++. +.++++++.+++.|+++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 299 ETPSFDEIAKKHKRRGYFLYSEL-KKRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EcCCcchhhhhccccchhHHHHH-HHcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 5541000 0001123566666 556998532 23356899999 668999999999988654
No 132
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=2.6e-28 Score=223.71 Aligned_cols=317 Identities=14% Similarity=0.109 Sum_probs=219.7
Q ss_pred CCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCC
Q 038416 19 LGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~ 98 (387)
+++..+++++.+++++.+..... ..|.+.....++++.+++++ + ++++++++|+++++..++.++.++||
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd 72 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGG 72 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCC
Confidence 34445789999999998865432 24555556788888888887 2 56788888889999999999999999
Q ss_pred eEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-------CceEEEEeCCCCCccccCCHH
Q 038416 99 NILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-------NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 99 ~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~l~~p~nptG~~~~~~ 168 (387)
+|+++.|+|..+.. ... ..|.++..++.. . +.+|++++++++++ ++++|++++|+|| |..++.+
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~ 146 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEF--LSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLD 146 (338)
T ss_pred eEEEecCcceeeecCCcHHH--HcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHH
Confidence 99999999976442 344 578888888763 2 56899999999864 6889999999997 5566999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE-EeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL-VTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i-~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++|+++|+|++|..+.....+. ++..+..... +++.|+||+|+++| |++ +.++ +++
T Consensus 147 ~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~--------~~~ 213 (338)
T cd06502 147 ELKAISALAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR--------DFI 213 (338)
T ss_pred HHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH--------HHH
Confidence 99999999999999999999986432111111 2222211122 56789999998876 544 4443 677
Q ss_pred HHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 248 DSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+.+..... .+.+.+++.+.++...|+.. ...+..+++.++++++.+.|+++ ++. + .+..++++.++++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~v~~~~~~ 287 (338)
T cd06502 214 ARARRRRKQAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-E-SEVQTNIVLLDPVEAN 287 (338)
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-c-ccccCCeEEEecCCcc
Confidence 77765532 12334556666666666542 23445567777788999999988 444 3 3444556666654210
Q ss_pred ccCCCcHHHHHHHHH--HhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLA--KEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll--~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
.....+..++. .++|+.+.+.. .+++|++++ +++++++++++.+++
T Consensus 288 ----~~~~~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 ----AVFVELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ----HHHHHHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 01112223222 15699887753 288999995 488999999998864
No 133
>PLN02721 threonine aldolase
Probab=99.97 E-value=7.7e-28 Score=221.96 Aligned_cols=319 Identities=16% Similarity=0.139 Sum_probs=211.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-CCCeEEEc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-PGANILIP 103 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~g~~vl~~ 103 (387)
.+++.+.+++..........+|++ ...+||+.++++++. +.+++++++++++..++.++++ +||+|+++
T Consensus 17 ~~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~ 86 (353)
T PLN02721 17 KPTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVHCDVRGSEVILG 86 (353)
T ss_pred CCCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHHccCCCCeEEEc
Confidence 467888888876422222223433 368999999999942 3456666667777777777776 99999999
Q ss_pred CCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhc-------cCceEEEEeCC-CCCccccCCHHHHHH
Q 038416 104 RPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-------ENTVAIVIINP-GNPCGNVFSYQHLQK 172 (387)
Q Consensus 104 ~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~l~~p-~nptG~~~~~~~~~~ 172 (387)
+|+|..... .+. ..|.++..++.+ .++.+|+++++++++ +++++|+++++ +||||.+++.+++++
T Consensus 87 ~~~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 87 DNSHIHLYENGGIST--LGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred Cccceehhcccchhh--hcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 999875544 456 788888888764 345689999999987 57889999885 789999999999999
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE-EEeeCCCCcccchhHHHHHH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW-LVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~-i~~~~~~~~~~~~~~~~~~~ 251 (387)
|.++|+++|+++|+|++|.......... +...... ....++.|+||+++. ++|+ ++.++ ++++.+.
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~-~~d~~~~s~sK~l~~---~~G~~~~~~~--------~~~~~~~ 229 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVK-AADSVSVCLSKGLGA---PVGSVIVGSK--------SFIRKAK 229 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhh-hCCEEEEecccccCC---ceeeEEecCH--------HHHHhHH
Confidence 9999999999999999986321100011 1111111 112445579999753 3576 44433 6777665
Q ss_pred hhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCCCceEEEEEecCcccccCCC
Q 038416 252 GCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC-PVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 252 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
.... ....+......++..+.. .+....+ .++..++++.+.+.|++++++.. +..+ .++++|++++... + .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~--~-~ 302 (353)
T PLN02721 230 RLRKTLGGGMRQVGVLAAAALVA--LQENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAV-ETNIVYFDITDGS--R-I 302 (353)
T ss_pred HHHHhcCCCeehhHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCc-cceEEEEEccCCc--c-c
Confidence 5443 122222222222221111 1122232 33335667888899988877743 3233 4567888876410 0 1
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
+..++...| .++||.+.|+. ..++|++++ .+++++++++++|++++..
T Consensus 303 ~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 303 TAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred cHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 355677776 47799999974 578999995 5899999999999987753
No 134
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=4.6e-28 Score=223.98 Aligned_cols=325 Identities=16% Similarity=0.166 Sum_probs=231.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCC
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGY 107 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~ 107 (387)
..+.+++.+++..+. ..|....+..+||++++++++ .+++++|+|+++|+..++.+++++||.| +++|.|
T Consensus 32 ~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f 101 (431)
T cd00617 32 GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHF 101 (431)
T ss_pred HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcc
Confidence 366666666665443 369988999999999999993 3689999999999999999999999977 689999
Q ss_pred cchHHHhhccCCCceeeeeccCCCCC------cc--CChhhHHHhhccC----ceEEEEeCCCCCc-cccCCHHHHHHHH
Q 038416 108 PLYEIHAAGSNNNLEARHYDLLPEKR------WE--VDLDGVEALADEN----TVAIVIINPGNPC-GNVFSYQHLQKIA 174 (387)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~~~~~~------~~--~~~~~l~~~~~~~----~~~v~l~~p~npt-G~~~~~~~~~~l~ 174 (387)
..+...+. ..|.+++.+++.+..+ |. +|++.|+++++++ +++|++++|+||+ |+.++.++++++.
T Consensus 102 ~~~~~~i~--~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~ 179 (431)
T cd00617 102 DTTRGHIE--ANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVR 179 (431)
T ss_pred cchHHHHH--hCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHH
Confidence 99988888 9999999998865432 44 9999999999765 7789999999998 9999999999999
Q ss_pred HHHHhcCcEEeeccccccc--cc-----CCCCCccccccCCCccEEEEecCcccccccccc------eEEEEeeCCCCcc
Q 038416 175 RTARNLGIIVIADEVYNHL--AF-----GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWR------LGWLVTSDPNGIL 241 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r------~G~i~~~~~~~~~ 241 (387)
++|++||++||.|+++... .+ ++....++.. ..+.+.|++|.+.+.|+| .||+++++
T Consensus 180 eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d----- 249 (431)
T cd00617 180 ELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTMSAKKDGLVNIGGFLALRD----- 249 (431)
T ss_pred HHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEEEeecCCCCccceEEEeCc-----
Confidence 9999999999999996521 11 1211222221 123345666666666665 56888865
Q ss_pred cchhHHHHHHhhh----h-c-cCCcchHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 242 QNSGFVDSIKGCL----N-A-ASHPVTFIQAAVPRIVDET-NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 242 ~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
++++++++... . . ..+.+.....+++..|... ..+++. ...++++++.+.|++. |+.++ .|.+|+
T Consensus 250 --~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~----~~~~~r~~l~~~L~~~-G~~v~-~P~Ggh 321 (431)
T cd00617 250 --DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLR----HRVEQVRYLGDRLDEA-GVPIV-EPAGGH 321 (431)
T ss_pred --HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHHHHC-CCCcc-CCCcce
Confidence 24777776432 1 0 1122333334444355432 123333 2333558888899888 78844 899999
Q ss_pred EEEEecCccc--cc-CCCcHHHHHHHHHHhcCeEEEc-CCcc-CC-----------CCeEEEEee---CChHhHHHHHHH
Q 038416 315 FVMVKLNVSM--LE-DIGDDLEFCLKLAKEESVIILP-GRTV-GM-----------KNWLRIAFA---AEPATLEDGLER 375 (387)
Q Consensus 315 ~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gi~v~~-g~~~-~~-----------~~~~Ri~~~---~~~e~~~~~~~~ 375 (387)
++|++.+... .+ ...++..++.+|+++.||.+.- |... +. ...+|+++. .+.+.++.+.+.
T Consensus 322 ~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~ 401 (431)
T cd00617 322 AVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAA 401 (431)
T ss_pred EEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHH
Confidence 9999876421 11 1114778898999999999653 3311 11 257999993 488999988888
Q ss_pred HHHHHHH
Q 038416 376 IKAFCQR 382 (387)
Q Consensus 376 l~~~~~~ 382 (387)
|..+.++
T Consensus 402 ~~~~~~~ 408 (431)
T cd00617 402 VIALYER 408 (431)
T ss_pred HHHHHhh
Confidence 8887765
No 135
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=7.5e-28 Score=223.82 Aligned_cols=325 Identities=13% Similarity=0.114 Sum_probs=228.4
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCC---------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPT---------LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~---------~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~- 94 (387)
++|+.+++++.+.+.... .++.. ....++|+.+++++ ++++++|++|+|+++++..++.++.
T Consensus 10 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 678899999998876421 22211 12446667777777 3567899999999999999998764
Q ss_pred --CCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 --RPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 --~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
.+|++|++...+|+++.. .+. ..|.++..++++. ++.+|+++++++++++++++++++++||||..+|
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~~--~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~--- 154 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHLE--KQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP--- 154 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHHH--HcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---
Confidence 456889999988876543 334 5799999888743 3468999999999989999999999999999988
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++|+++|+|++++. +..+..+.....+ +++.|.+|.++++| +|+++.++... . .|.+...
T Consensus 155 ~~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~~-~-~p~~~g~ 223 (379)
T TIGR03402 155 IEEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGTR-F-RPLLRGG 223 (379)
T ss_pred HHHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCCC-C-CCcccCC
Confidence 56889999999999999999984 2223333333333 77888999776666 78888765321 1 1222111
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC---ce-EEEEEecCccc
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQ---GA-MFVMVKLNVSM 324 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~---~g-~~~~~~~~~~~ 324 (387)
........++++.....++.++++.. .+++++..++.+++++.+++.|++ ++++.....+. ++ ..+++ +.
T Consensus 224 ~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 298 (379)
T TIGR03402 224 HQERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EY-- 298 (379)
T ss_pred ccCCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cC--
Confidence 10111124567777777777777653 346777778888899999999885 77776442221 12 22232 21
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...| +++||.+.+|..|.. .+.+|+|++ ++++|++++++.|+++++++
T Consensus 299 ----~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 299 ----IEGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred ----CCHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1345666655 677999999876632 268999995 58999999999999998876
Q ss_pred hh
Q 038416 384 AK 385 (387)
Q Consensus 384 ~~ 385 (387)
++
T Consensus 374 ~~ 375 (379)
T TIGR03402 374 RA 375 (379)
T ss_pred Hh
Confidence 53
No 136
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=7.9e-28 Score=224.23 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=238.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..++.+++++.... ..++ ..+..++++.+.+.+++.++.. ..+.+++++++++++..++..++++||+|++.+
T Consensus 19 ~~~~~V~~a~~~~~----~~~~--~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 19 NIPERVLRAMNRPN----EDHR--SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCHHHHHHhcCCC----CCCC--CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 57778887775533 2222 2355777888887777766642 234678888999999999999999999999999
Q ss_pred CCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 105 PGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 105 p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
++|++. ...++ ..|.+++.++.+.. ..++++++++++++ ++++|++++++||||.++|.+++.++++ |+
T Consensus 92 ~~~~~~~~~~~~~--~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~ 166 (401)
T PLN02409 92 IGQFSLLWIDQMQ--RLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CA 166 (401)
T ss_pred CCchhHHHHHHHH--HcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hh
Confidence 999765 46677 78999999987532 34789999999875 6899999999999999999666666655 99
Q ss_pred hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh----
Q 038416 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL---- 254 (387)
Q Consensus 179 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~---- 254 (387)
++|+++|+|++++. +..+..+..++. .+++.|.+|+++.| .++||++.++ +.++++....
T Consensus 167 ~~g~~~vvD~v~s~----g~~~id~~~~~~---D~~~~s~~K~l~~P-~G~G~l~~~~--------~~~~~~~~~~~~~~ 230 (401)
T PLN02409 167 QHPALLLVDGVSSI----GALDFRMDEWGV---DVALTGSQKALSLP-TGLGIVCASP--------KALEASKTAKSPRV 230 (401)
T ss_pred ccCcEEEEEccccc----CCccccccccCc---cEEEEcCccccCcC-CCcceeEECH--------HHHHHHhcCCCCCe
Confidence 99999999999874 222222222322 37778889997543 3599999875 4444443210
Q ss_pred ------------h--c-cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEE
Q 038416 255 ------------N--A-ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ---GAMFV 316 (387)
Q Consensus 255 ------------~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~~ 316 (387)
. . .++++...+.++.++++...+..++++.++++++++++++.|+++ +++++.... .....
T Consensus 231 ~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~ 309 (401)
T PLN02409 231 FFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVT 309 (401)
T ss_pred ecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceE
Confidence 0 1 336667778888888886666778889999999999999999887 677543211 22334
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
++.++.. .+..++...+++++||.+.+|.....++.|||+. ..+.+++..++.+|++++.+..
T Consensus 310 ~~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 310 AVVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EEeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 5555431 2456777788889999999987654578999999 3588999999999999987653
No 137
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=2.4e-28 Score=215.93 Aligned_cols=332 Identities=14% Similarity=0.126 Sum_probs=245.4
Q ss_pred CCCcHHHHHHHHHHhcCCCC-----CCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh--c
Q 038416 24 LSDSTVAEDAVVDALRTAHY-----NCYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL--A 94 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~-----~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l--~ 94 (387)
.|+.|+++++|...+..... ..|+. ....++.|+.||+.+ ++++++|++|+|+|++.+.++... .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 47889999999998876311 11221 123567788999998 568899999999999999999873 2
Q ss_pred ----CCCCeEEEcCCCCcchHHHhhcc-CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 ----RPGANILIPRPGYPLYEIHAAGS-NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 ----~~g~~vl~~~p~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++|.+|+++.-.|+.+...++.. ..|.++.+++++. +..+|+++|+++++++|.+|.++..||.+|++.|
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp--- 159 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP--- 159 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---
Confidence 25789999999999877666611 4599999999864 4479999999999999999999999999999977
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++++++++|.+++. |+-+..+..+.-+ +...|-+|..|+.| +|.++.++.. .-.|.+...
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~~--~~~p~i~GG 228 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPGV--RLEPLIHGG 228 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCCC--ccCceeccC
Confidence 89999999999999999999995 4434444443333 66778999988888 7888875422 111121111
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCC--CceEEEEEecCccccc
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI-PCITCPVKP--QGAMFVMVKLNVSMLE 326 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~--~~g~~~~~~~~~~~~~ 326 (387)
-.......++.+.++..++..+++. ..+.++....++...++++.+.|.+. |++.+...+ .-.+.+.+.|+.
T Consensus 229 gQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g---- 303 (386)
T COG1104 229 GQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG---- 303 (386)
T ss_pred cCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC----
Confidence 1111124567788888888888774 34557888899999999999999974 666533222 123344445543
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ ..+.+... +..+||.+..|+.|.. ...+|+|++ ++++|++.+++.+.++++++++
T Consensus 304 -v-~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 304 -V-EGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred -C-cHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1 44455554 5788999999998853 357999995 5789999999999999999875
No 138
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=3.2e-28 Score=226.50 Aligned_cols=326 Identities=12% Similarity=0.068 Sum_probs=226.6
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC--------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP--------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~--------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
++|+.+.+++.+.+..... +.+. ..-..++|+.+++++ +.++++|++++|+++++..++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 11 PMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence 5788999999888764211 1111 012456777777777 4577899999999999999988875
Q ss_pred --CCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 --RPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 --~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++|+.|++....|+++.. .++ ..|.++..++++ .++.+|++++++++++++++|++++|+||||.++|
T Consensus 84 ~~~~g~~vv~~~~~h~s~~~~~~~~~--~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~--- 156 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQSLE--SQGYTVTEIPVD--KSGLIRLVDLERAITPDTVLASIQHANSEIGTIQP--- 156 (381)
T ss_pred ccCCCCEEEECCcccHHHHHHHHHHH--hCCCEEEEEeeC--CCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---
Confidence 568999999877776543 455 679999988875 33568999999999888999999999999999987
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH-
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD- 248 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~- 248 (387)
+++|.++|+++|+++|+|++++.. .....+..+ +..+++.|++|.+|++| +|++++++..... ....
T Consensus 157 ~~~I~~l~~~~~~~vivD~~~~~g----~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~---~~~~~ 224 (381)
T PRK02948 157 IAEIGALLKKYNVLFHSDCVQTFG----KLPIDVFEM---GIDSLSVSAHKIYGPKG--VGAVYINPQVRWK---PVFPG 224 (381)
T ss_pred HHHHHHHHHHcCCEEEEEChhhcc----ccccCcccC---CCCEEEecHHhcCCCCc--EEEEEEcCCCCCC---CcccC
Confidence 678888999999999999877631 111122222 33478899999988888 7998876521100 0000
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE---EecCcccc
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM---VKLNVSML 325 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~---~~~~~~~~ 325 (387)
.........++++.+++.++..+++... +++++..+++.++++++++.|+++ ++.+. ......+.. +.+..
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~~~i~~~~~--- 298 (381)
T PRK02948 225 TTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTL-PLPIE-VEGHSTSCLPHIIGVTI--- 298 (381)
T ss_pred CCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EeCCCccCcCCEEEEEe---
Confidence 0000011245778888888888887533 467888899999999999999988 55422 111111111 11111
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
++. +..++...+ .++||.+.+|..|.. .+++|+|++ ++++|++++++.|+++++++.
T Consensus 299 ~~~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 299 KGI-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCC-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 111 345565555 677999998775311 368999995 589999999999999887654
No 139
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=6.7e-28 Score=225.71 Aligned_cols=315 Identities=17% Similarity=0.179 Sum_probs=217.9
Q ss_pred CCcHHHHHHHHHHhcCCCC---CCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---c
Q 038416 25 SDSTVAEDAVVDALRTAHY---NCYSPTLG----VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL---A 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~---~~y~~~~~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~ 94 (387)
++|+.+++++.+.+..... ..|....+ ..++|+.+++++ +.++++|++++|+++++..++.++ .
T Consensus 28 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~t~~l~~~~~~~~~~~ 101 (397)
T TIGR01976 28 QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANATSLTFLLSRAISRRW 101 (397)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCHHHHHHHHHHHHHhcC
Confidence 5788999999988764211 12432222 357788888887 345567999999999998887775 5
Q ss_pred CCCCeEEEcCCCCcchH----HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHH
Q 038416 95 RPGANILIPRPGYPLYE----IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++||+|++..++|++.. ..++ ..|.++..++++++ ++.+++++++++++++++++++++|+||||..++ +
T Consensus 102 ~~gd~vl~~~~~~~s~~~~~~~~~~--~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~ 175 (397)
T TIGR01976 102 GPGDEVIVTRLDHEANISPWLQAAE--RAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD---L 175 (397)
T ss_pred CCCCEEEEcCCchHhHHHHHHHHHH--hcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC---H
Confidence 89999999999987643 4556 78999999987642 3578999999999889999999999999999977 8
Q ss_pred HHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~ 250 (387)
++|.++|+++|+++|+|+++.. +.....+.... ..+++.|++|++ |.|+|++++++ ++++++
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~---~d~~~~s~~K~~---g~~~G~l~~~~--------~~~~~l 237 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYA----PHGLIDVQATG---ADFLTCSAYKFF---GPHMGILWGRP--------ELLMNL 237 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcC---CCEEEEechhhc---CCceEEEEEcH--------HHHhhC
Confidence 8889999999999999999853 22222222222 236778999996 35689999875 455554
Q ss_pred Hhhhh-----------ccCCcchHHHHHHHHHhhhccH--------------HHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 251 KGCLN-----------AASHPVTFIQAAVPRIVDETNE--------------AFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 251 ~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
..... -.++++.....++..+++...+ .++++..++..+.++++++.|++++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~ 317 (397)
T TIGR01976 238 PPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVT 317 (397)
T ss_pred CCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 43211 0123333333444333332111 1356677778888899999998887677
Q ss_pred CCCC---CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-----------CCCeEEEEee--CChHhH
Q 038416 306 CPVK---PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-----------MKNWLRIAFA--AEPATL 369 (387)
Q Consensus 306 ~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------~~~~~Ri~~~--~~~e~~ 369 (387)
++.. ...+.++.+.++. .+..++...| +++||.+..|..+. ..+++|||++ ++++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 390 (397)
T TIGR01976 318 LYGVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEV 390 (397)
T ss_pred EeCCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHH
Confidence 4422 1134455555542 1345566655 66799999875543 2468999994 588999
Q ss_pred HHHHHHH
Q 038416 370 EDGLERI 376 (387)
Q Consensus 370 ~~~~~~l 376 (387)
+++++.|
T Consensus 391 ~~l~~~l 397 (397)
T TIGR01976 391 DRLLEAL 397 (397)
T ss_pred HHHHHhC
Confidence 9988764
No 140
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=9e-28 Score=223.03 Aligned_cols=315 Identities=19% Similarity=0.196 Sum_probs=224.1
Q ss_pred CCcHHHHHHHHHHhcCCCCC-CCCC-------CCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhhcC
Q 038416 25 SDSTVAEDAVVDALRTAHYN-CYSP-------TLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-~y~~-------~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
++|+.+.+++++.+.....+ +.+. .....++|+.++++++ .+ ++++++|+|+++++..++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 57788999998887532111 1111 1234578888888883 34 67999999999999999999987
Q ss_pred ---CCCeEEEcCCCCcch----HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 96 ---PGANILIPRPGYPLY----EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 96 ---~g~~vl~~~p~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+||+|+++.++|++. ....+ ..|.++..++.+ .++.+|++++++.+++++++|++++++||||...+
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~-- 157 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAE--RTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP-- 157 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHh--hcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC--
Confidence 899999999999874 34455 678999999875 34578999999999889999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|+++|+++|+++|+|++++... ...++..... .+++.|++|+++. .++|++++++ ++++
T Consensus 158 -~~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~ 219 (373)
T cd06453 158 -VKEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLE 219 (373)
T ss_pred -HHHHHHHHHHcCCEEEEEhhhhcCc----eeeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhh
Confidence 6788899999999999999987422 1112222222 3677899999765 4589999875 4544
Q ss_pred HHHhhhh---------------------c-cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 249 SIKGCLN---------------------A-ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 249 ~~~~~~~---------------------~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
.+..... + ..+++.....++..+++...+..++++.++..++++++.+.|++++++.+
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~ 299 (373)
T cd06453 220 EMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRV 299 (373)
T ss_pred cCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 4432210 0 12344455555565665544455677788888899999999998887774
Q ss_pred CCCC-CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------CCCCeEEEEee--CChHhHHHHHHH
Q 038416 307 PVKP-QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV--------GMKNWLRIAFA--AEPATLEDGLER 375 (387)
Q Consensus 307 ~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~~Ri~~~--~~~e~~~~~~~~ 375 (387)
+..+ ..+.++++.++. .+..++.+.+ .++||.+.+|..+ +.++++|++++ +++++++++++.
T Consensus 300 ~~~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~ 372 (373)
T cd06453 300 YGDAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEA 372 (373)
T ss_pred eCCccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhh
Confidence 4221 124455655542 1445666665 5679999887643 23579999996 589999999876
Q ss_pred H
Q 038416 376 I 376 (387)
Q Consensus 376 l 376 (387)
|
T Consensus 373 l 373 (373)
T cd06453 373 L 373 (373)
T ss_pred C
Confidence 4
No 141
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=1.2e-27 Score=222.57 Aligned_cols=331 Identities=12% Similarity=0.122 Sum_probs=220.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH--YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.++++.-|....+.++ .+|.+.+++.+++.... ...|+ .....++++.+++++ + .+++++++|+++++
T Consensus 28 ~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~~~~~~sg~~a~ 97 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHVSNLYY-TEPQEELAEKLVEHS----G----ADRVFFCNSGAEAN 97 (379)
T ss_pred EEEEcCcchhhccCCC-CCHHHHHHHHHHHhhccccccccC-CHHHHHHHHHHHhhC----C----CCEEEEeCCcHHHH
Confidence 4555555433222232 56899999999887531 11232 223445555555554 2 35999999999999
Q ss_pred HHHHHhhc---C----CCCeEEEcCCCCcchHHHhhccCCCceee----eeccCCCCCccC--ChhhHHHhhccCceEEE
Q 038416 87 EISLSVLA---R----PGANILIPRPGYPLYEIHAAGSNNNLEAR----HYDLLPEKRWEV--DLDGVEALADENTVAIV 153 (387)
Q Consensus 87 ~~~~~~l~---~----~g~~vl~~~p~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~--~~~~l~~~~~~~~~~v~ 153 (387)
..+++.+. . +|++|+++.|+|+.+...+. ..+.... ..++..+..+.. |++.+++.+++++++|+
T Consensus 98 ~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 175 (379)
T TIGR00707 98 EAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL--SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVI 175 (379)
T ss_pred HHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH--HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEE
Confidence 99998662 2 37999999999988766655 4443321 122221111111 78999999887888888
Q ss_pred EeCCCCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
++.++|++|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .++.......++ .++||.++ +|+|+||+
T Consensus 176 ~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~---~t~sK~~~-~G~riG~~ 250 (379)
T TIGR00707 176 VEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDI---ITLAKGLG-GGVPIGAT 250 (379)
T ss_pred EEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCE---EEEccccc-CCcccEEE
Confidence 87667788874 68999999999999999999999999987665532 121112212222 36899988 99999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-CITCPVKP 310 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 310 (387)
++++ ++++.+.... ...++.+++.+.++.++|+.... .+..++++++++.+++.|+++. .......+
T Consensus 251 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (379)
T TIGR00707 251 LAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVR 319 (379)
T ss_pred EEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 9875 6777776532 23456788899988888764221 2345566666667766666531 11111123
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
..|.++|+.++. +..++...+ .++||.+.|+. .+++||+++ .+++++++++++|+++
T Consensus 320 ~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 320 GKGLMLGIELEA-------PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred cCceEEEEEecC-------cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 457788888753 345566654 67799999863 478999983 5899999999999875
No 142
>PRK07049 methionine gamma-lyase; Validated
Probab=99.97 E-value=2.9e-27 Score=220.50 Aligned_cols=231 Identities=16% Similarity=0.149 Sum_probs=178.8
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCc
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNL 121 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~ 121 (387)
..|+. .....|++.+|++. ..+++++++||++|+..++.+++++||+|+++.|+|..+...+. ....|+
T Consensus 78 ~R~~~-Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRFNH-PNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCCCC-cCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 44554 46689999999988 34578899999999999999999999999999999999866532 015788
Q ss_pred eeeeeccCCCCCccCChhhHHHhhc-----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHh---cCcEEeeccccccc
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALAD-----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARN---LGIIVIADEVYNHL 193 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~---~~~~li~D~~~~~~ 193 (387)
+++.++. ..|++++++++. +++++|++++|+||||.+++.+++.++++.|+. +++++|+|++|...
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 7666642 246677776653 478999999999999999999999999988654 68999999998754
Q ss_pred ccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHH
Q 038416 194 AFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRI 271 (387)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 271 (387)
... .++. . +..+++.|+||.++ .+|+|+||+++++ ++++.++.... .+...+++.++++...
T Consensus 223 ~~~----~pl~-~---g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r~ 286 (427)
T PRK07049 223 VFQ----KPLE-H---GADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGRS 286 (427)
T ss_pred ccC----Cccc-c---CCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 321 1221 1 23488899999998 6999999999865 67787876654 4566788888887776
Q ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 272 VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 272 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
++. +..+.++..++++.+.+.|++.|++..+.+|
T Consensus 287 L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 287 LET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred CCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 653 5666777799999999999998877655555
No 143
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=3.6e-27 Score=219.39 Aligned_cols=331 Identities=11% Similarity=0.097 Sum_probs=233.5
Q ss_pred CCcHHHHHHHHHHhcCCCCC-----CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-----
Q 038416 25 SDSTVAEDAVVDALRTAHYN-----CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA----- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-----~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----- 94 (387)
+.++.+++++.+.......+ .|+ ..+...+++.++++... .+. .++++|++|+|+++++..+++++.
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 57788999999988642111 122 13456788888877753 221 257899999999999999998762
Q ss_pred CC-CCeEEEcCCCCcchHHH---hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHH
Q 038416 95 RP-GANILIPRPGYPLYEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~-g~~vl~~~p~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++ +++|+++...|+++... ++ ..|.++..+++++ ++.+|+++++++++++++++++++|+||||..+| +
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~--~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~ 159 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLE--SLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---I 159 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHH--HCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---H
Confidence 45 47899998777765433 45 6899999998753 3468999999999989999999999999999998 6
Q ss_pred HHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~ 250 (387)
++|.++|+++|+++|+|++++. +.....+..... .+++.|++|++|++| +|+++.++...+ .|.+....
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~vr~~~~~--~p~~~g~~ 228 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAI----GKIPVDVQKAGV---DFLSFSAHKFHGPKG--VGGLYIRKGVEL--TPLFHGGE 228 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhc----CCCccCccccCC---CEEEEcchhhCCCCc--eEEEEECCCCCC--CCcccCCC
Confidence 6888888999999999999874 211122222222 288899999887777 688887653211 12111000
Q ss_pred HhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEEEecCcccccC
Q 038416 251 KGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ---GAMFVMVKLNVSMLED 327 (387)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~ 327 (387)
.......++++.+.+.++..+++.. .++++...++++++++++.+.|++++++.++ .+. ...++.+.++.
T Consensus 229 ~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~----- 301 (382)
T TIGR03403 229 HMGGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIKG----- 301 (382)
T ss_pred CCCCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeCC-----
Confidence 0001124677888888888887643 3457777888999999999999988888754 332 13344454542
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccC--------------C-----CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVG--------------M-----KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~-----~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+...+...| .++||.+..|..|. . .+.+|+|++ ++++|++++++.|++++++++.
T Consensus 302 -~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 302 -VEGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred -CCHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1455666665 67799999876552 1 257999994 5899999999999999887654
No 144
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=7.2e-27 Score=218.93 Aligned_cols=320 Identities=15% Similarity=0.103 Sum_probs=221.5
Q ss_pred CCCCCCCcHHHHHHHHHHhcCC---C--CC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTA---H--YN-CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~---~--~~-~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.+++++.+++..- . .. .+.......+|++.+++++ ..+.+++++|+++|+..++.++
T Consensus 63 ~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~~sG~~An~~~l~~l 134 (407)
T PRK07179 63 DYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLCQSGWAANVGLLQTI 134 (407)
T ss_pred CccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHh
Confidence 4568889999999999998641 0 01 1111124578888888887 2356788999999999999999
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHH
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
..+||.|++..+.|.+....+. ..|.++..++. .|++++++++++ ++++|++++++||||.++| +++
T Consensus 135 ~~~g~~v~~~~~~h~s~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~p---l~~ 202 (407)
T PRK07179 135 ADPNTPVYIDFFAHMSLWEGVR--AAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAP---LAD 202 (407)
T ss_pred CCCCCEEEEECCcCHHHHHHHH--HCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCcccc---HHH
Confidence 9999999999999988877777 77877665532 488999998876 4778888899999999988 778
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCcc-EEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
|.++|+++|+++|+||+|+...++..+...+..++.... .+++.|++|+++ .|+|++++++ ++++.+.
T Consensus 203 I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~--------~~~~~~~ 271 (407)
T PRK07179 203 IVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR--------ELAEYVP 271 (407)
T ss_pred HHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH--------HHHHHHH
Confidence 899999999999999999854332222111222222112 488899999975 3689999865 5666665
Q ss_pred hhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 252 GCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 252 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.... ++.+.++....++.++++.. .......++++++++++++.|+++ ++. +. ..+.++++.++..
T Consensus 272 ~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~--~~~~i~~l~~~~~----- 340 (407)
T PRK07179 272 FVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR--SESQIIALETGSE----- 340 (407)
T ss_pred HhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC--CCCCEEEEEeCCH-----
Confidence 4321 23333444444444444432 223456788889999999999988 676 32 2355666665421
Q ss_pred CcHHHHHHHHHHhcCeEEE----cCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 329 GDDLEFCLKLAKEESVIIL----PGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
...+.+...+.++||.+. |+. ....+++||+++ .++++++++++.|++++++.
T Consensus 341 -~~~~~~~~~L~~~GI~~~~~~~p~~-~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 341 -RNTEVLRDALEERNVFGAVFCAPAT-PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred -HHHHHHHHHHHHCCceEeeecCCCC-CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 122334444567799743 211 112478999995 58999999999999988764
No 145
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=6.5e-27 Score=215.47 Aligned_cols=316 Identities=16% Similarity=0.116 Sum_probs=216.6
Q ss_pred CCCCcHHHHHHHHHHhcCCCC--CCC----CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 23 LLSDSTVAEDAVVDALRTAHY--NCY----SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~--~~y----~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
+.+.+|.+.+++++.+.+... ..| +......++++.++++++ . ++.++++++++++..++.+++++
T Consensus 13 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~--~~~iv~~sg~~a~~~~~~~~~~~ 84 (349)
T cd06454 13 GLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG------K--EAALVFSSGYAANDGVLSTLAGK 84 (349)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC------C--CCEEEeccHHHHHHHHHHHhcCC
Confidence 566779999999999975211 112 122334667777777662 2 24566666778998888888899
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----CceEEEEeCCCCCccccCCHHHHH
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
||.|+++.|+|.++...+. ..|.++..++. .|++.+++.+++ +++++++++++||||...+ ++
T Consensus 85 gd~Vl~~~~~~~~~~~~~~--~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~ 152 (349)
T cd06454 85 GDLIISDSLNHASIIDGIR--LSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LP 152 (349)
T ss_pred CCEEEEehhhhHHHHHHHH--HcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HH
Confidence 9999999999999888888 88988877642 366777877753 4677788899999999866 78
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCC-CccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTP-YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~ 250 (387)
+|+++|+++|+++|+|++|+...+.... ..........+..++++|++|.++.+| ||++.++ ++.+.+
T Consensus 153 ~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~--------~~~~~~ 221 (349)
T cd06454 153 ELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK--------ELIDYL 221 (349)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--------HHHHHH
Confidence 8899999999999999999743222111 000111123345799999999987755 8888765 566666
Q ss_pred Hhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 251 KGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 251 ~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
..... ...+.++..+.++...++...+ .....+++.++++.+.+.|+++ ++... .+.++.+.++.++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~~---- 293 (349)
T cd06454 222 RSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHIIPPLIGDDP---- 293 (349)
T ss_pred HHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcEEEEeCCCh----
Confidence 54321 2234556666666666654322 3556788888899999998887 66633 333344444433311
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccC---CCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVG---MKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
.+..++...++++ ||.+.++.... ..+++|++++ .+++++++++++|+++
T Consensus 294 -~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 294 -AKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -HHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1345677776554 99998753321 1478999996 5899999999999764
No 146
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=1e-26 Score=216.05 Aligned_cols=326 Identities=11% Similarity=0.061 Sum_probs=222.4
Q ss_pred CCCCcHHHHHHHHHHhcCCC-------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC
Q 038416 23 LLSDSTVAEDAVVDALRTAH-------YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~-------~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
.-|+++.+.+++.+...... ...+.......++|+.+|++++ .+++++++|+++++..++.++++
T Consensus 29 ~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~g~t~a~~~al~~l~~ 100 (387)
T PRK09331 29 GGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTHGAREGKFAVMHSLCK 100 (387)
T ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhcC
Confidence 35789999999999885321 0111112346889999999983 25788899999999999999999
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-------CceEEEEeCCCCCccccCCHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-------NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~l~~p~nptG~~~~~~ 168 (387)
+||+|+++.++|++....++ ..|.+++.++...+.++.+|++.+++++++ ++++|++++|+|++|...+
T Consensus 101 ~gd~Vlv~~~~h~s~~~~~~--~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~-- 176 (387)
T PRK09331 101 KGDYVVLDGLAHYTSYVAAE--RAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD-- 176 (387)
T ss_pred CCCEEEECCCchHHHHHHHH--HcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc--
Confidence 99999999999988877788 899999999874334567899999998863 6889999999999999866
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|+++|+++|+++|+|++|+... .+.+...+.. .+++.|++|+++ .+.++|++++++ ++++
T Consensus 177 -l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~~~--------~~i~ 239 (387)
T PRK09331 177 -AKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLATTE--------EYAD 239 (387)
T ss_pred -HHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEECH--------HHHh
Confidence 8899999999999999999998521 1112222222 388999999975 445899999875 5666
Q ss_pred HHHhhhh---------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEE
Q 038416 249 SIKGCLN---------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK-PQGAMFVMV 318 (387)
Q Consensus 249 ~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~g~~~~~ 318 (387)
.+..... +..+..+....++...+... .+.. +..++..++++++++.|++++|+.+... +....++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~ 317 (387)
T PRK09331 240 KVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-VERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKF 317 (387)
T ss_pred hcccccCCCcccceeeeceecCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEE
Confidence 6544311 11112211222222223221 1212 2445556777888999999988874421 233445445
Q ss_pred ecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHHHHh
Q 038416 319 KLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 319 ~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~~~~ 383 (387)
..+.... .......++...| +++||...+.. ....+|+.. +.++++++++++.|+++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 318 ETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred eCCchhHHhhhccccchhHHHHH-HHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 5442100 0001223466666 56799843321 256678887 678999999999999988764
No 147
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=5.8e-27 Score=219.30 Aligned_cols=323 Identities=15% Similarity=0.118 Sum_probs=219.4
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYN------CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.+++++.+++..-... .|+......+|++.++++++ .++.++++++++|+..++..+
T Consensus 54 ~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~sG~~an~~ai~~l 125 (402)
T TIGR01821 54 DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTSGYVANDATLATL 125 (402)
T ss_pred CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECchHHHHHHHHHHh
Confidence 3558899999999999998752111 11222235678888888872 245666677788999999887
Q ss_pred cC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---c-CceEEEEeCCCCCccccCCH
Q 038416 94 AR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---E-NTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 ~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~v~l~~p~nptG~~~~~ 167 (387)
.. +++.|+.....|......+. ..|.++..++. .|++.+++.++ + ++++|++++|+||+|.+.|
T Consensus 126 ~~~~~~~~v~~~~~~h~s~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~- 195 (402)
T TIGR01821 126 AKIIPGCVIFSDELNHASMIEGIR--HSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP- 195 (402)
T ss_pred hCCCCCCEEEEcchHhHHHHHHHH--HcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC-
Confidence 64 66767666666766666666 77777655542 25566666554 2 5788999999999999987
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++|.++|+++|+++|+||+|+...++..+.......+. +...++++|+||+|+++| ||+++++ ++
T Consensus 196 --l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~--------~~ 262 (402)
T TIGR01821 196 --IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASR--------KL 262 (402)
T ss_pred --HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCH--------HH
Confidence 888899999999999999999843332211111111111 123578899999998877 8988765 67
Q ss_pred HHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 247 VDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 247 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++.++.... ++.+.++..+.++.++|+...+. ....+++.++++++.+.|+++ ++... .+ .+.++.+.++..
T Consensus 263 ~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~-~~~i~~i~~~~~ 337 (402)
T TIGR01821 263 IDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PN-PSHIVPVIIGDA 337 (402)
T ss_pred HHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CC-CCCEEEEEeCCH
Confidence 777765432 23456666777777777643221 344556677888899999887 66633 33 355555555321
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
....++...+++++||.+.+...... ..++||++. .++++++++++.|+++++++
T Consensus 338 -----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 338 -----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred -----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 12346767776677999987543322 368999994 68999999999999988764
No 148
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=2.9e-27 Score=221.15 Aligned_cols=331 Identities=13% Similarity=0.103 Sum_probs=225.0
Q ss_pred cccCCCCCCCCCCCCCCC-cHHHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSD-STVAEDAVVDALRTAH--YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~v~~a~~~~~~~~~--~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
.++++.-|.+.. .++. +|.+.+++++++.... ...|... ...+|.+.+++++ + ...++++++++|+++|
T Consensus 44 ~~lD~~s~~~~~--~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~----~-~~~~~~v~~~~sgsea 115 (398)
T PRK03244 44 EYLDLLGGIAVN--ALGHAHPAVVEAVTRQLATLGHVSNLFATE-PQIALAERLVELL----G-APEGGRVFFCNSGAEA 115 (398)
T ss_pred EEEECCcCHhhc--cCCCCCHHHHHHHHHHHHhccCccCccCCH-HHHHHHHHHHHhC----C-CCCCCEEEEeCchHHH
Confidence 345554443322 2343 7999999999988521 1234432 1234555555443 3 1134799999999999
Q ss_pred HHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCce------------eeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 86 IEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLE------------ARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 86 ~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
+..+++.+..+| +.|+..+++|+++..... +..|.. +..+|. .|++++++.+.+++++|
T Consensus 116 ~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~av 187 (398)
T PRK03244 116 NEAAFKLARLTGRTKIVAAEGGFHGRTMGAL-ALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAAV 187 (398)
T ss_pred HHHHHHHHHHHCCCeEEEECCCcCCccHHHH-hccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEEE
Confidence 999999876666 578888889987754333 012211 111111 27889999887778888
Q ss_pred EEeCCCCCccccCCHHH-HHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINPGNPCGNVFSYQH-LQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~-~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
+++.++||+|..+|+++ +++|.++|++||+++|+||+|+++...|..+. ......++ +.++||+++ +|+|+|
T Consensus 188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD-----i~t~sK~l~-~G~~ig 261 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD-----VVTLAKGLG-GGLPIG 261 (398)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC-----EEEEchhhh-CCcccE
Confidence 88888999999987655 99999999999999999999998776654321 11222222 347899987 889999
Q ss_pred EEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-C
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP-V 308 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 308 (387)
++++++ ++++.+.... ..+++.+++.+.++.+.|+...+. +..+++.++.+.+++.|+++ +...+ .
T Consensus 262 ~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 329 (398)
T PRK03244 262 ACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEAL-GHPLVDH 329 (398)
T ss_pred EEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhc-CCCceee
Confidence 999976 6777665432 345678888999988887743222 34456666677788888875 22211 1
Q ss_pred CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 309 KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
....|.++|+.++.. ....+...+ .++||.+.+.. .+++|++++ .+++++++++++|++++++..
T Consensus 330 v~g~g~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 330 VRGRGLLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EeeccEEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 234688889888531 234555555 56799998742 478999984 589999999999999998754
No 149
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=5e-27 Score=218.35 Aligned_cols=328 Identities=15% Similarity=0.077 Sum_probs=228.4
Q ss_pred CCCCcHHHHHHHHHHhcCCC----CCCCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 23 LLSDSTVAEDAVVDALRTAH----YNCYSP----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~----~~~y~~----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
.+|+|+.+.+++.+.++... ...|+. .....++|+.++++++. ...++|++|+|+++++..++.+++
T Consensus 9 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~ 83 (376)
T TIGR01977 9 TYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLL 83 (376)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhcc
Confidence 35788999999998877531 112322 13456788888888842 133589999999999999999998
Q ss_pred CCCCeEEEcCCCCcchH----HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHH
Q 038416 95 RPGANILIPRPGYPLYE----IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++||+|++..++|+++. ...+ ..|.++..++.+. ++.+|+++++++++++++++++++|+||||..++ +
T Consensus 84 ~~gd~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~ 156 (376)
T TIGR01977 84 KEGDHVITTPMEHNSVARPLECLKE--QIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---I 156 (376)
T ss_pred CCCCEEEECcchhhHHHHHHHHHHH--HcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---H
Confidence 99999999999998754 3445 5688998888753 4568999999999889999999999999999998 6
Q ss_pred HHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH---
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV--- 247 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~--- 247 (387)
++|.++|+++|+++|+|++++... ....+..... .+++.|.+|+++.|. .+|.++.++..... +...
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~--~~~~~~~ 226 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGV----IPIDMTELAI---DMLAFTGHKGLLGPQ-GTGGLYIREGIKLK--PLKSGGT 226 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCc----cCCCchhcCC---CEEEecccccccCCC-CceEEEEcCCcCcC--ceecCCC
Confidence 778889999999999999998522 1112222222 388899999865332 26777666532110 0000
Q ss_pred -------HHHHh--hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEE
Q 038416 248 -------DSIKG--CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ---GAMF 315 (387)
Q Consensus 248 -------~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~ 315 (387)
+.... .+...++++.....++..+++...+...+...++...+++.+.+.|++++++.+..... .+..
T Consensus 227 ~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (376)
T TIGR01977 227 GSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGV 306 (376)
T ss_pred ccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCe
Confidence 00000 00012355566666676677655555667778888899999999998887777442211 2345
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----------CCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----------MKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+++.++. .+..++...|.+++||.+.+|..+. ..+.+|++++ .++++++.+++.|++
T Consensus 307 v~~~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 307 VSFTVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEEECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 5555542 1455666666555599999887553 2478999994 589999999999875
No 150
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=7.7e-27 Score=215.52 Aligned_cols=317 Identities=18% Similarity=0.184 Sum_probs=220.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEcCChHHHHHHHHHhhcCCCCeEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE--DVYLTLGCSQAIEISLSVLARPGANIL 101 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~l~~~g~~vl 101 (387)
..+++.+++++...... ....|. ....++|+.++++++ ++++ .|++++|+++++..++.+++.+||+++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi 78 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAG------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL 78 (355)
T ss_pred CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhc------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence 35778888888773221 111222 345677777777773 3333 678899999999999999998888877
Q ss_pred EcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 102 IPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 102 ~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+..+.+++ +...++ ..|.++..++++ .++.+|+++++++++. +.+.+++++++||||...+ +++|.++|
T Consensus 79 ~~~~~~~~~~~~~~a~--~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~ 151 (355)
T TIGR03301 79 VLINGAYGERLAKICE--YLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVA 151 (355)
T ss_pred EECCCchhhHHHHHHH--HcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHH
Confidence 76666554 356667 789999988874 3457899999998864 3457778899999999976 78999999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHhh---
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--- 253 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--- 253 (387)
+++++++|+|++++.. . ...++..+ +..+++.|++|++ +++| +||+++++ +.++.+...
T Consensus 152 ~~~~~~livD~~~s~g---~-~~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~ 214 (355)
T TIGR03301 152 RSHGAVLIVDAMSSFG---A-IPIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARS 214 (355)
T ss_pred HHcCCEEEEEeccccC---C-cccchhhc---CccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCC
Confidence 9999999999987642 1 12223333 2348889999985 4556 69999875 555554410
Q ss_pred ---------------hhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEE
Q 038416 254 ---------------LNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKP--QGAMF 315 (387)
Q Consensus 254 ---------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~g~~ 315 (387)
....++++...+.++..++....+. ++++..++++++++++.+.|+++ ++..+..+ ..+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~ 293 (355)
T TIGR03301 215 LYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPII 293 (355)
T ss_pred ceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcE
Confidence 1123456777777777777654333 37778888899999999999887 66633222 23445
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
+++.++... . .+..++...+ .++||.+.+|..+.. +++||++. .++++++++++.|+++
T Consensus 294 ~~~~~~~~~--~-~~~~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 294 VSFLYPDDP--D-FDFDDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred EEEECCCCC--c-chHHHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 677765310 0 1234555555 667999999865543 79999983 4899999999999865
No 151
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=9.5e-27 Score=215.18 Aligned_cols=315 Identities=16% Similarity=0.143 Sum_probs=219.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCC--CCEEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSP--EDVYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
..++.+.+++.... .++.+ ..-..++|+.+++++ ++++ +.|++|+|++++++.++.++..+||.+
T Consensus 13 ~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~v 81 (363)
T TIGR02326 13 TTSRTVKEAMLFDW-----CTWDSDYNIVVEQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKL 81 (363)
T ss_pred CCCHHHHHHhCCCC-----CCCChHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeE
Confidence 45555555544432 12322 123455677777776 3444 479999999999999999998888888
Q ss_pred EEcCCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 101 LIPRPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 101 l~~~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
++..+++++. ...++ ..|.+++.++++ .+..+|++.++++++. +++++.+++++||||+.+| +++|.++
T Consensus 82 lv~~~~~~~~~~~~~a~--~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l 154 (363)
T TIGR02326 82 LVVINGAYGARIVQIAE--YLGIPHHVVDTG--EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKL 154 (363)
T ss_pred EEEeCChhhHHHHHHHH--HcCCceEEEeCC--CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHH
Confidence 7776666554 35667 789999988874 3457899999998875 3467888999999999988 7899999
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHh---
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKG--- 252 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~--- 252 (387)
|+++|+++|+|++++. |..+.++..++. .++++|++|++ +.+| +|++++++ +.++.+..
T Consensus 155 ~~~~g~~livD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~ 217 (363)
T TIGR02326 155 AHRHGKVTIVDAMSSF----GGIPIDIAELHI---DYLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNAR 217 (363)
T ss_pred HHHcCCEEEEEccccc----cCcccchhhcCc---cEEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCC
Confidence 9999999999998873 222233444433 38889999986 4456 79999875 34333211
Q ss_pred ------------h----hhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--Cce
Q 038416 253 ------------C----LNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKP--QGA 313 (387)
Q Consensus 253 ------------~----~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~g 313 (387)
. ....++++.+.+.++.++++...+. .++++.+++.++++++++.|+++ ++..+..+ ..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 296 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSP 296 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCc
Confidence 0 0122456777888877777654333 47778899999999999999887 66644222 234
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e-CChHhHHHHHHHHHHHH
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A-AEPATLEDGLERIKAFC 380 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~-~~~e~~~~~~~~l~~~~ 380 (387)
...++.++... . .+...+.+.+ +++||.+.+|..+ ..+++||++ + .+.++++.+++.|++++
T Consensus 297 ~~~~~~~~~~~--~-~~~~~v~~~L-~~~gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 297 IITSFYSPEDP--D-YRFADFYQRL-KEQGFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred eEEEEECCCCC--C-CCHHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 44566665310 0 1334565655 6679999998765 357899997 3 58999999999998875
No 152
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.96 E-value=7.2e-27 Score=216.87 Aligned_cols=317 Identities=15% Similarity=0.142 Sum_probs=218.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHH-----hcC-C-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 17 RPLGVSLLSDSTVAEDAVVDA-----LRT-A-HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~-----~~~-~-~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
.+...|+++++..+.++..+. .+. + .+..| +..+..+|++.++++++ .+++++++|++.|+..+
T Consensus 25 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~-~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~a 95 (400)
T PRK06234 25 GSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRL-GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSS 95 (400)
T ss_pred CCccCCcccccceecCChHHHHHhhccCcCCCcccCC-CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHH
Confidence 345667888888887776552 111 1 22233 34678999999999983 24788899999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 90 LSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
+.+++++||+|+++.|.|..+... +. ..|+++..++. .|++++++++++++++|++++|+||||.+.
T Consensus 96 l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~--~~G~~v~~vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~ 166 (400)
T PRK06234 96 LWSALKAGDHVVASDTLYGCTFALLNHGLT--RYGVEVTFVDT-------SNLEEVRNALKANTKVVYLETPANPTLKVT 166 (400)
T ss_pred HHHHhCCCCEEEEecCccchHHHHHHHHHh--hCCeEEEEECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcC
Confidence 999999999999999999765433 45 68888888864 278999999998999999999999999998
Q ss_pred CHHHHHHHHHHHHhc--CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCccc
Q 038416 166 SYQHLQKIARTARNL--GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQ 242 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~ 242 (387)
+ +++|.++|+++ |+++|+|++|+...+. .++ .. +..+++.|++|.++.+|.++ ||+++++
T Consensus 167 d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l-~~---g~Divv~S~sK~l~g~g~~~gG~v~~~~------ 229 (400)
T PRK06234 167 D---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL-QL---GADVVVHSATKYLNGHGDVIAGFVVGKE------ 229 (400)
T ss_pred C---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch-hh---CCcEEEeeccccccCCCCceeEEEEecH------
Confidence 7 78888888886 9999999999865432 122 12 23489999999998888765 9988865
Q ss_pred chhHHHHHHhh--h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--------
Q 038416 243 NSGFVDSIKGC--L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-------- 311 (387)
Q Consensus 243 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------- 311 (387)
++++.++.. . ..+...+++..+.+...++. +..+.++.+++++.+.+.|++.|.+..+..|.
T Consensus 230 --~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-----l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~ 302 (400)
T PRK06234 230 --EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-----LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYE 302 (400)
T ss_pred --HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHH
Confidence 677776643 2 23445555555555444443 55677777788888888888876554343432
Q ss_pred --------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----------------------C-CCeEEE
Q 038416 312 --------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----------------------M-KNWLRI 360 (387)
Q Consensus 312 --------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------------~-~~~~Ri 360 (387)
.|.++.+.++.. ......+++.| +-.++.+.-|+... . ++.+|+
T Consensus 303 ~~~~~~~~~g~l~s~~l~~~----~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~ 377 (400)
T PRK06234 303 LAKKQMSLPGAMISFELKGG----VEEGKVVMNNV-KLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRL 377 (400)
T ss_pred HHHHhCCCCCceEEEEecCc----HHHHHHHHHhC-CcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEE
Confidence 244555566421 01223444443 33343333332211 0 357999
Q ss_pred EeeCChHhHHHHHHHHHHHHHH
Q 038416 361 AFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 361 ~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
|++. |+.+.+++.|.++++.
T Consensus 378 svGl--E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 378 SVGL--EDVDDIIADLKQALDL 397 (400)
T ss_pred EeCC--CCHHHHHHHHHHHHHH
Confidence 9998 5677777777777765
No 153
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=1.8e-26 Score=216.51 Aligned_cols=322 Identities=16% Similarity=0.106 Sum_probs=216.8
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCC------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 21 VSLLSDSTVAEDAVVDALRTAHY------NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 21 ~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
|.+++.+|.+.+++.+++..-.. ..|.......+|++.+++++ + . ++.++.++|++++..++..+.
T Consensus 56 ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~-~~~~~~~sG~~an~~ai~~l~ 127 (407)
T PRK09064 56 YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-K-EAALVFTSGYVSNDATLSTLA 127 (407)
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-C-CcEEEECcHHHHHHHHHHHHh
Confidence 45788999999999998865211 11223334677888888877 2 2 345555556778888777765
Q ss_pred C--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHH
Q 038416 95 R--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 95 ~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~ 168 (387)
. +++.|+.....|.+....+. ..+.++..++. .|++.+++.++ +++++|++++++|++|...+
T Consensus 128 ~~~~~~~i~~~~~~h~s~~~~~~--~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~-- 196 (407)
T PRK09064 128 KLIPDCVIFSDELNHASMIEGIR--RSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP-- 196 (407)
T ss_pred CCCCCCEEEEeCcchHHHHHHHH--HcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC--
Confidence 4 66666666666766666666 66776655543 25677777664 46789999999999999977
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.++|+++|+++|+||+|+...++..+.......+. +...++++||||+||++| ||+++++ +++
T Consensus 197 -l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~--------~~~ 264 (407)
T PRK09064 197 -IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA--------ALV 264 (407)
T ss_pred -HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH--------HHH
Confidence 888889999999999999999833232211111111111 233688899999998877 9988865 677
Q ss_pred HHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 248 DSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+.++.... ++.+.++..+.++.+.++...+ .....+++.++++++.+.|+++ ++.++ . ..+.++++.++..
T Consensus 265 ~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~-~~~~iv~i~~~~~- 338 (407)
T PRK09064 265 DAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIPVM-P-NESHIVPVMVGDP- 338 (407)
T ss_pred HHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-C-CCCCEEEEEeCCH-
Confidence 77765432 2334556666666666654222 1334577888899999999887 67633 3 3355666555421
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
....++...+++++||.+.+...... ..++||+++ ++++|++++++.|+++++++
T Consensus 339 ----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 339 ----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred ----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 12456777776677999987543322 368999994 58999999999999988764
No 154
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.6e-27 Score=194.88 Aligned_cols=288 Identities=18% Similarity=0.321 Sum_probs=225.5
Q ss_pred CCCCCCEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-
Q 038416 70 KLSPEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 70 ~~~~~~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 147 (387)
+..+++|.+.-|+-+.+..++++.+.|| ++|+.-.|+|.-|...+. ..+++++.+|+++ +|.++.+++.+.++.
T Consensus 83 pLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~--iNd~eVvkvpl~p--dF~lnvdai~evl~~d 158 (375)
T KOG0633|consen 83 PLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAA--INDAEVVKVPLNP--DFSLNVDAIAEVLELD 158 (375)
T ss_pred CCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEee--cCCceEEEecCCC--CccccHHHHHHHHhcc
Confidence 6788999999999999999999999999 899999999998888888 8999999999865 678999999997754
Q ss_pred -CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc
Q 038416 148 -NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG 226 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g 226 (387)
..+++++++|+||||..+..+++.+|.+--. |.++++||+|.+|.-.++...-+. ...+++++.++||.||++|
T Consensus 159 s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~---kYpNLivlqTlSKsfGLAG 233 (375)
T KOG0633|consen 159 SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVESRMKLVK---KYPNLIVLQTLSKSFGLAG 233 (375)
T ss_pred ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccccchHhH---hCCceeehhhhhhhcCcce
Confidence 5789999999999999999999999887433 789999999999763333223233 3357899999999999999
Q ss_pred cceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 227 WRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 227 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
+|+|+...+. .+++-+...+. ..+.+..+..++.+++.+..-..++...+.+.+.++++...|.++|.+..
T Consensus 234 iRvG~~~~~~--------~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~ 304 (375)
T KOG0633|consen 234 IRVGYGAFPL--------SIAEILNRAKA-PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND 304 (375)
T ss_pred eEeecccccH--------HHHHHHHhccC-CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC
Confidence 9999999875 56665655543 44555556666666777655567888889999999999999999887764
Q ss_pred CCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE-cCCccCCCCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 307 PVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL-PGRTVGMKNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
...+...+|+.+++.... . .-+..++.+++-+.||.++ .|..-+..+++||++++.+|. .-+++.|+++
T Consensus 305 ~~gg~daNFiLi~v~~~~--n-~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 305 YPGGSDANFILIEVTGGD--N-GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred CCCcccccEEEEEEcCCC--c-HHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 445667888888875320 1 1234667777888999988 455556789999999876543 3366666654
No 155
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=8.1e-27 Score=202.17 Aligned_cols=344 Identities=19% Similarity=0.213 Sum_probs=257.1
Q ss_pred cccccCCCCCCCCCC-CCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC---CCCCCE--EEcC
Q 038416 7 QETRHSPWPRRPLGV-SLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK---LSPEDV--YLTL 80 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~---~~~~~i--~~~~ 80 (387)
.+.++|.++|--... -..|.-+.|.+|-+..........|-+..|.++.++.+++++ +|.. +..+++ +=|.
T Consensus 25 R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~l~~~Rv~t~Qt~ 101 (396)
T COG1448 25 RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---FGADSPALAEDRVATVQTL 101 (396)
T ss_pred CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---cCCCcHHHHhhhHhheecC
Confidence 346677777732111 124667777777777777776678989899999999999998 4422 334455 3478
Q ss_pred ChHHHHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEe
Q 038416 81 GCSQAIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVII 155 (387)
Q Consensus 81 g~~~a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~ 155 (387)
|||.|+..+...+. .+..+|.+++|+|.++..++. ..|+++..+|.....+..+|.+.+.+.+.. +..+++..
T Consensus 102 GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~--~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~ 179 (396)
T COG1448 102 GGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE--AAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHG 179 (396)
T ss_pred CcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHH--hcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEec
Confidence 99999999999985 455679999999999999999 999999999988777778999988877643 44444555
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC-CccccccC-CCccEEEEecCcccccccccceEEEE
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP-YVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
.+|||||.-++.+++++|+++.++.+.+.++|-+|++|.-+... .-.++.+- ....+++..|+||.||+-|-|+|.+.
T Consensus 180 CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~ 259 (396)
T COG1448 180 CCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALS 259 (396)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeE
Confidence 56999999999999999999999999999999999997643211 11111111 11237899999999999999999965
Q ss_pred eeCCCCcccchhHHHHHH----hh-hhccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 038416 234 TSDPNGILQNSGFVDSIK----GC-LNAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEI-P 302 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~-~ 302 (387)
.-.. +.+...++. .. +...++|+..+...+..+|++.+ +..+..+++++.++|..+.+.|++. +
T Consensus 260 vva~-----~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~ 334 (396)
T COG1448 260 VVAE-----DAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGA 334 (396)
T ss_pred EEeC-----CHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4321 123333333 22 33456788888888998988754 3456778888999999999999883 2
Q ss_pred --CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHH
Q 038416 303 --CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAF 379 (387)
Q Consensus 303 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~ 379 (387)
++..+ ..+.|+|.+..+. .+.+..|.+++||.+..++ |||+ +.++.+++.+.+.|.++
T Consensus 335 ~~~f~~i-~~Q~GMFsy~Gls----------~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 335 PRNFDFI-ISQRGMFSYTGLS----------PEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred CcccchH-hhcCceeecCCCC----------HHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 36633 6778988876553 3567778899999988754 9999 67999999999998765
No 156
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=6.2e-26 Score=210.22 Aligned_cols=323 Identities=17% Similarity=0.172 Sum_probs=222.7
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.++++.+++++...... ....|. ....++|+.++++++ ..-..+.+++++|+++++..++.++..+||.|++.
T Consensus 14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 36788888777665421 110122 245677777777773 11123568899999999999999999999999998
Q ss_pred CCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 104 RPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 104 ~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
.+++++. ...++ ..|.++..++.. .++.+|++++++++++ +++++++++|+||||...| +++|.++|++
T Consensus 87 ~~~~~~~~~~~~~~--~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~ 159 (368)
T PRK13479 87 DNGAYGARIAQIAE--YLGIAHVVLDTG--EDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKR 159 (368)
T ss_pred eCCchHHHHHHHHH--HcCCcEEEEECC--CCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHH
Confidence 8888765 36677 889999999874 2346899999998864 4567899999999999988 7788889999
Q ss_pred cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHhhh----
Q 038416 180 LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL---- 254 (387)
Q Consensus 180 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~---- 254 (387)
+|+++|+|++++. +. ...++...+. .+++.|++|++ +++| +||+++++ +.++.+....
T Consensus 160 ~~~~livDa~~~~---g~-~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~ 222 (368)
T PRK13479 160 HGKRLIVDAMSSF---GA-IPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLS 222 (368)
T ss_pred cCCEEEEEccccc---CC-ccccccccCc---eEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCee
Confidence 9999999977642 22 2223333332 37778999975 5677 69999975 4554443211
Q ss_pred --------------hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEE
Q 038416 255 --------------NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFVM 317 (387)
Q Consensus 255 --------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~~ 317 (387)
...++++.+.+.++.++++... +.+++++.+++.++++.+++.|+++ ++..+..+. ......
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 301 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVT 301 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEE
Confidence 1123566666666666666543 3456778889999999999999988 676432211 111222
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e-CChHhHHHHHHHHHHHHHHh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A-AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~-~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.++.. ++. +..++...+ .++||.+.+|..+ ..+++|++. + .++++++.+++.|+++++++
T Consensus 302 ~~~~~~--~~~-~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 302 FHAPAD--PAY-DFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred EECCCC--CCc-CHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 233321 011 345666666 5569999987543 246899997 3 48999999999999998765
No 157
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=9.8e-26 Score=209.34 Aligned_cols=325 Identities=19% Similarity=0.135 Sum_probs=223.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----CCCe
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----PGAN 99 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g~~ 99 (387)
.+++|.+.+++.+.+..... ......+..++.+.+.+++.+.+| .+.+++++++|+++++..++.++.. ++++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~ 106 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLG-DPGLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPN 106 (371)
T ss_pred cCchHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCce
Confidence 46778888999888864211 111112333333344444443333 4556788999999999999877653 5789
Q ss_pred EEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 100 ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 100 vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
|++.+++|+++...++ ..|.+++.++.+ .++.+|+++|+++++++++.|++++++|+||...| +++|.++|++
T Consensus 107 vl~~~~~h~s~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~ 179 (371)
T PRK13520 107 IVVPESAHFSFDKAAD--MLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALE 179 (371)
T ss_pred EEecCcchHHHHHHHH--HcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 9999999999998888 899999988874 34578999999999888888888889999999977 8888999999
Q ss_pred cCcEEeecccccccccCC-CCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh---
Q 038416 180 LGIIVIADEVYNHLAFGS-TPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN--- 255 (387)
Q Consensus 180 ~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--- 255 (387)
+|+++++|++|+.+.... .....+ .+....-..+..|.+|+ +.++.++|+++..++ ++++.+.....
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~-------~~~~~l~~~~~~~~ 250 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE-------SYLDALAVDTPYLT 250 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH-------HHHHhhcccCcccc
Confidence 999999999998654211 111111 11111112555678896 677788998887541 35444431111
Q ss_pred ------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 256 ------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 256 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
..++.+.....++..+++...+..+++..++..++++++.+.|+++ ++..+..+. ..++.+.++
T Consensus 251 ~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~-------- 320 (371)
T PRK13520 251 SKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPV-LNIVAFDDP-------- 320 (371)
T ss_pred CCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC-ceEEEEecC--------
Confidence 0112334456666666665555667888899999999999999888 776232444 345555554
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...| .++||.+.++. ..+++|+++. +++++++.+++.|+++++
T Consensus 321 ~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 321 NPDEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 345666666 45599987743 2568999985 689999999999988765
No 158
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=9.4e-26 Score=209.55 Aligned_cols=333 Identities=15% Similarity=0.165 Sum_probs=223.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+.+++-|....+.++ .+|.+.+++++++.+.. ..+. ....+++..+++++.+..+ .+.+++++++++|++.
T Consensus 30 ~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~ 101 (377)
T PRK02936 30 TYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVSN-LFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEA 101 (377)
T ss_pred EEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--cccc-ccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHH
Confidence 4566655543344455 78899999999987531 2222 2446889999999976432 3589999999999999
Q ss_pred HHHhhc-CCC-CeEEEcCCCCcchHHHhhccCCCceee---eeccCCCCCc--cCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 89 SLSVLA-RPG-ANILIPRPGYPLYEIHAAGSNNNLEAR---HYDLLPEKRW--EVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 89 ~~~~l~-~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+++... .+| ++|++.+++|++...... +..+.... ..++.+...+ .-|++.+++.+.++++++++..+++++
T Consensus 102 A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~ 180 (377)
T PRK02936 102 ALKLARKHTGKSKIVTFEQSFHGRTFGTM-SATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEG 180 (377)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCCcHHhh-hccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCC
Confidence 998643 244 679999999986432222 02221110 1111111000 016889999888788888888888999
Q ss_pred ccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 162 GNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 162 G~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
|.. .+++++++|.++|++||+++|+||+|.++.+.|.... +..+..... +.++||.++ +|+|+||+++++
T Consensus 181 G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~-~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~---- 251 (377)
T PRK02936 181 GVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFA-YEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKK---- 251 (377)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhH-HHhhCCCCc---EEEEccccc-CCCccEEEEEcH----
Confidence 887 5789999999999999999999999998877664322 212221222 337999987 899999999875
Q ss_pred ccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEE
Q 038416 241 LQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQGAMF 315 (387)
Q Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~ 315 (387)
++.+.+.... ..+++++++.+.++.++|+...+ .+..+++.++.+.+++.|++ ++.+..+ ...|.+
T Consensus 252 ----~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v--~~~g~~ 322 (377)
T PRK02936 252 ----ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNI--RGKGLM 322 (377)
T ss_pred ----HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE--eecceE
Confidence 6777765433 24456789999999988875322 22334555555555555554 3332211 235778
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
+|+.++. +...+.. .+.++||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 323 ~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 323 IGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 8988863 2344444 5577899998853 47899996 568999999999998753
No 159
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=1e-25 Score=210.64 Aligned_cols=328 Identities=12% Similarity=0.093 Sum_probs=223.3
Q ss_pred CCcHHHHHHHHHHhcCCCCCCC--CC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCY--SP------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y--~~------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
|.++.+++++.+.+.....+.. .. .....++|+.+++++ ++++++|++++|+++++..++.++.
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 87 (402)
T TIGR02006 14 PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGATESNNLAIKGIAHF 87 (402)
T ss_pred CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 6789999999888753211111 10 123456677888887 4577899999999999999887763
Q ss_pred --CCCCeEEEcCCCCcchHHH---hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 --RPGANILIPRPGYPLYEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 --~~g~~vl~~~p~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++||+|+++.++|+++... ++ ..|.+++.++++ .++.+|+++++++++++++++++++++||||...|
T Consensus 88 ~~~~g~~Vi~~~~~h~s~~~~~~~~~--~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~--- 160 (402)
T TIGR02006 88 YKSKGNHIITSKTEHKAVLDTCRYLE--REGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD--- 160 (402)
T ss_pred hcCCCCEEEECCCccHHHHHHHHHHH--hcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc---
Confidence 6889999999999876544 34 568999998875 34468999999999889999999999999999977
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++|+++|+|++++.. ..+..+..... .+++.|.+|.++.+| +|++++++.....-.|.....
T Consensus 161 ~~~I~~l~~~~g~~livD~a~a~g----~~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~ 231 (402)
T TIGR02006 161 IAAIGEICRERKVFFHVDAAQSVG----KIPINVNELKV---DLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGG 231 (402)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcC----CcccCccccCC---CEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCC
Confidence 788899999999999999999842 22222333333 388889999876556 899888753211111111000
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEEecCcccccC
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG--AMFVMVKLNVSMLED 327 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~ 327 (387)
-.......++++.....++..+++... ..++...++.+++++.+++.|++++++.....+.. ...+.+.|+.
T Consensus 232 ~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~----- 305 (402)
T TIGR02006 232 GHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY----- 305 (402)
T ss_pred CccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC-----
Confidence 000011134566667777767776433 45777788899999999999988877653311111 1111223331
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+...+...+ .++.+..|..+.. .+++|+|++ ++++|++++++.|+++++.++
T Consensus 306 -~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 306 -VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred -cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1233343332 3888887766532 268999995 589999999999999887764
No 160
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=209.30 Aligned_cols=323 Identities=16% Similarity=0.082 Sum_probs=216.8
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCC--C----CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYN--C----YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.+.+++++++..-... . +.......+|++.+++++. .+..++++++++++..++..+
T Consensus 54 ~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~SG~~An~~ai~~l 125 (406)
T PRK13393 54 DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFTSGYVSNWAALSTL 125 (406)
T ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHh
Confidence 3447788999999999998752110 0 1111134677777777772 256666666677999999877
Q ss_pred cC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCH
Q 038416 94 AR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 ~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~ 167 (387)
.. +|+.|++....|.++...+. ..|.++..++. .|++.+++.+. +++++|++++++|++|.+.|
T Consensus 126 ~~~~~g~~I~~~~~~H~s~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~- 195 (406)
T PRK13393 126 GSRLPGCVILSDELNHASMIEGIR--HSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP- 195 (406)
T ss_pred hcCCCCCEEEEccchhHHHHHHHH--HcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC-
Confidence 65 67877777777777777777 77777766653 25566666553 35678889999999999988
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++|.++|+++|+++|+|++|+...++..+......... ....++++|+||+|+++| ||+++++ ++
T Consensus 196 --l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~--------~~ 262 (406)
T PRK13393 196 --IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSA--------AL 262 (406)
T ss_pred --HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCH--------HH
Confidence 888889999999999999999833332211111111111 123577799999998877 8988765 67
Q ss_pred HHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 247 VDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 247 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++.++.... ++.+.++..+.++.++|+...+. .....++.++++++.+.|+++ ++.++ .+ .+.++.+.++..
T Consensus 263 ~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~-~~~i~~v~~~~~ 337 (406)
T PRK13393 263 CDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIPHL-PN-PSHIVPVMVGDP 337 (406)
T ss_pred HHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CC-CCCeEEEEeCCH
Confidence 777765432 23455666677777777643222 122356678888899999876 66633 33 444554444321
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
....++...+++++||.+.++..... ..++||+++ +++++++++++.|+++++++
T Consensus 338 -----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 338 -----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 12356666676667999988644322 368999995 68999999999999988764
No 161
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.3e-25 Score=210.46 Aligned_cols=326 Identities=17% Similarity=0.166 Sum_probs=219.4
Q ss_pred cCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH-H
Q 038416 11 HSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSP-----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS-Q 84 (387)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~-~ 84 (387)
+..+.|.| +++.|+.+.+++.++ .. ...|.+ ..|..++++++++++.+.++. +.++++++++++ +
T Consensus 23 ~~l~~g~~----~~~~p~~~~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~ 93 (398)
T cd00613 23 SFLGSGTY----KHNPPAVIKRNILEN-EF--YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAA 93 (398)
T ss_pred cccccccc----CCcCcHHHHHHhccc-cC--cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHH
Confidence 56667666 899999998887776 22 224444 578899999999999987763 444676666555 4
Q ss_pred HHHHHHHhhcCC--CCeEEEcCCCCcchHHHhhccCCC----ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCC
Q 038416 85 AIEISLSVLARP--GANILIPRPGYPLYEIHAAGSNNN----LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPG 158 (387)
Q Consensus 85 a~~~~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 158 (387)
+...+..++..+ ||.|++++|.|+.+...+. ..+ .+++.+++.+ ++.+|++++++++++++++|++++|+
T Consensus 94 ~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~--~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~~~ 169 (398)
T cd00613 94 AEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVAR--TRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQYPN 169 (398)
T ss_pred HHHHHHHHHhcccCCCEEEEcCccCcchHHHHH--HhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEECCC
Confidence 544555555565 9999999999998877776 555 8888888743 34689999999998899999999986
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccccc----ccceEEEEe
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVP----GWRLGWLVT 234 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~----g~r~G~i~~ 234 (387)
++|... +.+++|.++|+++|+++|+|+++..... ....... +..+++.|++|++ .+ |+++|+++.
T Consensus 170 -~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~ 238 (398)
T cd00613 170 -TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEY---GADIVVGNLQKTG-VPHGGGGPGAGFFAV 238 (398)
T ss_pred -CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHc---CCCEEEeeccccC-CCCCCCCCceeEEEE
Confidence 899984 3469999999999999999998764221 1111122 2348899999997 54 788999998
Q ss_pred eCCCCcccchhHHHHHHhh------------------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 235 SDPNGILQNSGFVDSIKGC------------------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
++ ++++.+... .....+.++....++...+....+..+.+..
T Consensus 239 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~ 310 (398)
T cd00613 239 KK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIA 310 (398)
T ss_pred hh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 75 344332100 0011122223333333333333456778888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe
Q 038416 285 GLLKETADICYERIKEIPCITCPVKPQGAM--FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF 362 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~ 362 (387)
++++++++++++.|+++++.. . +.+.. .++++++... + .+..++...| .++||.+.... ....+.+|+++
T Consensus 311 ~~~~~~~~~l~~~L~~~~~~~-~--~~~~~~~~v~~~~~~~~--~-~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRis~ 382 (398)
T cd00613 311 ERAHLNANYLAKRLKEVGGVL-P--FNGPFFHEFVLRLPPLY--G-IRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMIEP 382 (398)
T ss_pred HHHHHHHHHHHHHHHhcCCcc-c--CCCCeeEEEEEEcCCcc--h-HHHHHHHHhh-hhcCccccccc-cCCCCeEEEEc
Confidence 999999999999999885443 2 22222 2455554210 0 1345666666 45688764421 12257899999
Q ss_pred e--CChHhHHHHHHHH
Q 038416 363 A--AEPATLEDGLERI 376 (387)
Q Consensus 363 ~--~~~e~~~~~~~~l 376 (387)
. ++++|++++++.|
T Consensus 383 ~~~~t~edid~~~~~L 398 (398)
T cd00613 383 TETETKEELDALLEAL 398 (398)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 4 6899999998764
No 162
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.7e-25 Score=207.06 Aligned_cols=293 Identities=16% Similarity=0.135 Sum_probs=201.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNN 120 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g 120 (387)
+..|+. ....+|++.++++++ .++.+++++++.++..++.+++++||+|+++.|.|........ ....|
T Consensus 55 y~r~~~-pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 55 YSRLGN-PTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred ccCCCC-cchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 334444 457899999999983 2456666677789999999999999999999998876544433 00345
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
.++..++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.....
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---- 191 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---- 191 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 55444432 3789999999889999999999999999987 788888889999999999999742211
Q ss_pred ccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhh-hh-ccCCcchHHHHHHHHHhhhccH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGC-LN-AASHPVTFIQAAVPRIVDETNE 277 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~ 277 (387)
.++. ... .+++.|++|.++.+|.++ |++++++ +.++++... .. .....+++.++.+...|+.
T Consensus 192 ~pl~-~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t--- 256 (386)
T PRK06767 192 RPLE-LGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT--- 256 (386)
T ss_pred Cchh-cCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---
Confidence 1221 222 378889999998888875 8888865 566655432 22 3344455555544444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
+..+.++.+++++.+.+.|+++|++..+.+|. .|.++.+.++.. ..+...+++.+ +..++.+.
T Consensus 257 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s 329 (386)
T PRK06767 257 --LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVS 329 (386)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecC
Confidence 55677888999999999999999888655442 233555555421 01344566655 55565555
Q ss_pred cCCccCC-----------------------CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 348 PGRTVGM-----------------------KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 348 ~g~~~~~-----------------------~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
-|+.... ++.+|+|++. |+.+.+++.|.+++..
T Consensus 330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 4432110 2579999998 5677888888887753
No 163
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.95 E-value=1.7e-25 Score=208.59 Aligned_cols=316 Identities=17% Similarity=0.150 Sum_probs=209.7
Q ss_pred CcHHHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC---------
Q 038416 26 DSTVAEDAVVDALRTAHYN-CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~-~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------- 95 (387)
.+|.+.++++++++..... .+.......+|.+.++++. ..+.+++++++++|++.+++....
T Consensus 57 ~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~ 128 (396)
T PRK04073 57 RHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVE 128 (396)
T ss_pred CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCC
Confidence 6789999999988753211 1111112234444454433 236899999999999999997631
Q ss_pred CC-CeEEEcCCCCcchHHHhhccCCCcee---eeeccCCC---CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 96 PG-ANILIPRPGYPLYEIHAAGSNNNLEA---RHYDLLPE---KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 96 ~g-~~vl~~~p~~~~~~~~~~~~~~g~~~---~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+| ++|+....+|++...... +..+... ..-+..+. -. .-|++++++.++++++++++..++||+|..++++
T Consensus 129 ~~r~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~ 206 (396)
T PRK04073 129 PNKAEIIACEGNFHGRTMAAV-SLSSEEEYKRGFGPMLPGIKKIP-YGDLEALKAAITPNTAAFLVEPIQGEAGINIPPE 206 (396)
T ss_pred CCCCEEEEECCCcCCCCHHHH-hhcCCcccccCCCCCCCCceEeC-CCCHHHHHHhcccCeEEEEEcCccCCCCCccCCH
Confidence 34 678888888876543322 0222110 00010000 00 1168899998887888888888899999987754
Q ss_pred -HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 -HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 -~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
.+++|.++|+++|+++|+||+|.++...+.... ....... ..+.++||.++.+|+|+||+++++ ++.
T Consensus 207 ~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~---pdi~~~sK~lg~gg~~ig~~~~~~--------~i~ 274 (396)
T PRK04073 207 GFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVT---PDMYILGKALGGGVFPISCVAANR--------DIL 274 (396)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCC---CCEEEecccccCCCCcceEEEEcH--------HHH
Confidence 699999999999999999999998766553221 1111111 123468999999889999999976 677
Q ss_pred HHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCCCCceEEEEEecCccc
Q 038416 248 DSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI--PCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+.+.... ..+++.+++.+.++.+.|+...+. ...++..++++++.+.|+++ +.+. . .+..|.|+++.++.
T Consensus 275 ~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~-~-~~~~g~~~~~~~~~-- 347 (396)
T PRK04073 275 GVFTPGSHGSTFGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIK-E-VRGRGLFIGVELNE-- 347 (396)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCccc-c-eecceEEEEEEecc--
Confidence 7775432 245667888998888888753322 23345556677777777765 2233 1 23346777877752
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
+..++...+ .++||.+.+.. .+++||++ ..+++++++++++|++++
T Consensus 348 -----~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 348 -----PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred -----hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 345666666 55699987642 47899997 568999999999998765
No 164
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=3.3e-25 Score=203.84 Aligned_cols=284 Identities=21% Similarity=0.213 Sum_probs=202.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcch----HHHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY----EIHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~----~~~~~~~~~g~~~~~ 125 (387)
....+|++.++++.+ . +..++++|+++++..++ .++++||+|+++.|.|++. ...+. ..|+++..
T Consensus 52 pt~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~--~~G~~v~~ 120 (366)
T PRK08247 52 PTRGVLEQAIADLEG------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWK--KWNVRFVY 120 (366)
T ss_pred chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhh--ccCceEEE
Confidence 467899999999983 2 34577888899999876 5778999999999999874 34455 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|..... . .++.
T Consensus 121 vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~-~---~p~~- 185 (366)
T PRK08247 121 VNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVL-Q---RPLE- 185 (366)
T ss_pred ECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc-c---Cchh-
Confidence 764 37899999998899999999999998654 7799999999999999999999963221 1 1111
Q ss_pred cCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
....+++.|+||.++. ++.+.|++++++ +++.+.++..+. .+...+++.++.+...++. +..+
T Consensus 186 ---~g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-----l~~r 250 (366)
T PRK08247 186 ---EGADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-----LALR 250 (366)
T ss_pred ---cCCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-----HHHH
Confidence 1335999999999864 356889998853 256666665543 3455667677666665553 5566
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEEecCcccccCCCcHHHHHHHH---------HHhcCeEEEcCCccC
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKP-QGAMFVMVKLNVSMLEDIGDDLEFCLKL---------AKEESVIILPGRTVG 353 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~ 353 (387)
.++.+++++.+.+.|+++|++..+..| .+|++.| .++.. .....++..+ .....+.+.|+..++
T Consensus 251 ~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~ 324 (366)
T PRK08247 251 MRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----EWVNPFLKSLKLITFAESLGGVESFITYPATQTH 324 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----HHHHHHHHcCCcceEccCCCCCceEEECCccccc
Confidence 777899999999999999888755566 6676665 55310 0111222221 122345555765432
Q ss_pred C-------------CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 354 M-------------KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 354 ~-------------~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
. ++.+|++++. |+.+.+++.|.++++.
T Consensus 325 ~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 325 ADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred ccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 2 3579999998 6778888888888865
No 165
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=4.4e-26 Score=209.53 Aligned_cols=310 Identities=16% Similarity=0.104 Sum_probs=219.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----------
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR---------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~---------- 95 (387)
++..+.+.+...+... ...|....+..++++.+++++.+.+|.+...+++++|+|+++++..++.++..
T Consensus 11 ~~~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~ 89 (345)
T cd06450 11 PPALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG 89 (345)
T ss_pred HHHHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence 3445555555555433 34577777889999999999998887654556899999999999999988742
Q ss_pred --CC--CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccC
Q 038416 96 --PG--ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 96 --~g--~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~ 165 (387)
++ +.|+++.++|.++...+. ..|.+++.+++++. +.+|+++|++++++ +++++++++|+||||...
T Consensus 90 ~~~~~~~~v~~~~~~h~~~~~~~~--~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~ 165 (345)
T cd06450 90 GRGIDKLVIVCSDQAHVSVEKAAA--YLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID 165 (345)
T ss_pred ccccCCeEEEEcCcchhHHHHHHH--HHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC
Confidence 23 478889999999988888 88999999987543 37899999999977 788889999999999985
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc-cccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM-GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+ +++|+++|+++|+++|+|++|+.+.......... ..+ ..-.++..|++|++ .++.++|+++.+
T Consensus 166 ~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~l-~~p~g~g~~~~~--------- 230 (345)
T cd06450 166 P---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGI--ERVDSISVDPHKYG-LVPLGCSAVLVR--------- 230 (345)
T ss_pred C---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCc--cccCEEEEchhHhh-CCCcchHHHHHH---------
Confidence 5 8999999999999999999999765432111111 111 11125667999974 455667776541
Q ss_pred hHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 245 GFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
...++++...+. ...++++.++..++++++.+.|++++++.++..+..+ ++.++++...
T Consensus 231 -----------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~ 289 (345)
T cd06450 231 -----------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSV 289 (345)
T ss_pred -----------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcc
Confidence 223333333333 3567888888889999999999998888755344444 4455554210
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--C-ChHhHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--A-EPATLEDGLERIKA 378 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~-~~e~~~~~~~~l~~ 378 (387)
-.+ .+..++...+ .++|+.+.++..+....++|++++ . +.++++++++.|++
T Consensus 290 ~~~-~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 290 KLD-ELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhh-HHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 000 1234565655 566666555554445679999995 3 78999999999865
No 166
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.95 E-value=9e-26 Score=212.59 Aligned_cols=328 Identities=17% Similarity=0.190 Sum_probs=213.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++.+++... ..|+...+..++...+++.+.+.++ ...+++++++|+++|+..+++.+. .++++|++.
T Consensus 53 ~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~ 128 (413)
T cd00610 53 NHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISF 128 (413)
T ss_pred CCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 7889999999998653 2344322234445555555544433 357899999999999999999874 567999999
Q ss_pred CCCCcchHHHhhccCC-------------CceeeeeccCCC----CCccCChhhHHHhhcc--CceEEEEeCC-CCCccc
Q 038416 104 RPGYPLYEIHAAGSNN-------------NLEARHYDLLPE----KRWEVDLDGVEALADE--NTVAIVIINP-GNPCGN 163 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-------------g~~~~~~~~~~~----~~~~~~~~~l~~~~~~--~~~~v~l~~p-~nptG~ 163 (387)
+++|+++..... .. ..++..+|.++. ..+..|++.|++.+++ +...+++++| ++++|.
T Consensus 129 ~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~ 206 (413)
T cd00610 129 EGAYHGRTLGAL--SLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGV 206 (413)
T ss_pred CCCcCCccHHHH--HhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCC
Confidence 999998654433 21 123444544311 1234488899988875 2444555555 667798
Q ss_pred cC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 164 VF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 164 ~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
.+ +.+++++|.++|++||+++|+||+|+++...+... ....+... ..+.|+||+++. |+|+||+++++
T Consensus 207 ~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~---~d~~t~sK~l~~-g~~~g~~~~~~------ 275 (413)
T cd00610 207 IVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVE---PDIVTLGKGLGG-GLPLGAVLGRE------ 275 (413)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCC---CCeEEEcccccC-ccccEEEEEcH------
Confidence 76 67779999999999999999999999865444321 11111111 124588999876 79999999865
Q ss_pred chhHHHHH--Hhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCC-CCCCceEEEE
Q 038416 243 NSGFVDSI--KGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC-ITCP-VKPQGAMFVM 317 (387)
Q Consensus 243 ~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~g~~~~ 317 (387)
++++.+ .... ..+.+.+++.+.++.+.++...+ .+..+++.++.+.+.+.|+.+.. ...+ .....|.+++
T Consensus 276 --~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 350 (413)
T cd00610 276 --EIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIG 350 (413)
T ss_pred --HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEE
Confidence 677775 2222 23456777788887777764322 34556666777777777765411 0111 1234567778
Q ss_pred EecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 318 VKLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 318 ~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
+.++.... ++......+...+ .++||.+.|+. .+.+|++++ .+++++++++++|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 351 IELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 77753210 0001234555555 56799999975 578999884 57899999999998753
No 167
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=9.8e-25 Score=200.10 Aligned_cols=251 Identities=15% Similarity=0.133 Sum_probs=183.5
Q ss_pred CCCCCCCCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 19 LGVSLLSDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
+...+++.++.+.++....... ...|+. ..+...||+.+|++. ..+++++++|+++|+..++.+++++
T Consensus 30 sst~~~~~~~~~~~~~~~~~~~--~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~ 99 (394)
T PRK09028 30 ASTVVFDTVAEMRHAAKNRANG--EMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKA 99 (394)
T ss_pred CCCcccCCHHHHHHHhccCccC--CceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCC
Confidence 3444677777766655432211 124554 345679999999886 2357899999999999999999999
Q ss_pred CCeEEEcCCCCcchHHHhh--ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHH
Q 038416 97 GANILIPRPGYPLYEIHAA--GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~ 174 (387)
||+|++++|.|.++...+. ....|.++..++.. +.+++++++++++++|++++|+||||.. .++++|+
T Consensus 100 GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~ 169 (394)
T PRK09028 100 GDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLS 169 (394)
T ss_pred CCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHH
Confidence 9999999999988765432 11577777665421 4577898999999999999999999887 6699999
Q ss_pred HHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 175 RTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
++|+++|+++|+|++|+... ...++ .+.. .+++.|.+|+++. ++.-.|+++.++ +++++++..
T Consensus 170 ~la~~~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~~--------~~~~~l~~~ 233 (394)
T PRK09028 170 RIAHEHDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATANE--------KHWDQLREH 233 (394)
T ss_pred HHHHHcCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECCH--------HHHHHHHHH
Confidence 99999999999999998522 12222 2333 4999999999854 446677765433 456666544
Q ss_pred h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 254 L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 254 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
. ..+...+++..+.+..-|+. +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus 234 ~~~~G~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP 286 (394)
T PRK09028 234 SYLMGQCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP 286 (394)
T ss_pred HHhcCCCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 3 24566777776666555554 7888899999999999999998876655555
No 168
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=2.7e-25 Score=206.52 Aligned_cols=218 Identities=19% Similarity=0.153 Sum_probs=166.3
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--c-cCCCceeee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--G-SNNNLEARH 125 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~-~~~g~~~~~ 125 (387)
.....+|++.+++++ ..+.+++++|+++|+..++.+++++||+|+++.|.|..+...+. . ...|.++..
T Consensus 75 ~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 75 NPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred ChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 456789999999988 34677899999999999999999999999999999987765442 0 036777665
Q ss_pred eccCCCCCccCChhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
++. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.+.. .
T Consensus 147 ~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~------~ 210 (418)
T PLN02242 147 VDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP------A 210 (418)
T ss_pred cCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH------H
Confidence 543 2789999999884 999999999999999975 8899999999999999999998654321 1
Q ss_pred ccCCCccEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFF 280 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~ 280 (387)
.+ +..+++.|+||.++.+|.+ .||+++++ ++++.++.... ...++....+.+...++.. ..+
T Consensus 211 ~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl 276 (418)
T PLN02242 211 RL---GADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHL 276 (418)
T ss_pred Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcH
Confidence 12 2348899999999888877 58888765 67777775532 1234444455555554432 345
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 281 AKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
..+.+++.++++.+.+.|+++ ++.
T Consensus 277 ~~r~~~~~~~a~~la~~L~~~-~~~ 300 (418)
T PLN02242 277 SLRMKEHCRRAMEYAKRMKEL-GLK 300 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 667788999999999999987 344
No 169
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.95 E-value=5.4e-25 Score=205.75 Aligned_cols=333 Identities=16% Similarity=0.140 Sum_probs=219.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+-|....+-++ .+|.+.+++.+++.+.. .++.... .+....+++.+.+.. ..+.++++++|++|+..
T Consensus 41 ~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~~~-~~~~~~l~~~l~~~~----~~~~~~~~~sGseA~e~ 112 (403)
T PRK05093 41 EYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNVFT-NEPALRLAKKLIDAT----FAERVFFANSGAEANEA 112 (403)
T ss_pred EEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCccC-CHHHHHHHHHHHhhC----CCCEEEEeCchHHHHHH
Confidence 4555544433233355 88999999999987521 1111111 122234444443322 23699999999999999
Q ss_pred HHHhhcC--------CCCeEEEcCCCCcchHHHhhccCCC------------ceeeeeccCCCCCccCChhhHHHhhccC
Q 038416 89 SLSVLAR--------PGANILIPRPGYPLYEIHAAGSNNN------------LEARHYDLLPEKRWEVDLDGVEALADEN 148 (387)
Q Consensus 89 ~~~~l~~--------~g~~vl~~~p~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 148 (387)
+++.... ..++|+..+.+|++....+. +..+ .++..++. -|++++++.+.++
T Consensus 113 a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 184 (403)
T PRK05093 113 AFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTV-SVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhH-hhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC
Confidence 9986521 23578888888887643322 0111 11111111 1788999988777
Q ss_pred ceEEEEeCCCCCcccc--CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCccccccc
Q 038416 149 TVAIVIINPGNPCGNV--FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVP 225 (387)
Q Consensus 149 ~~~v~l~~p~nptG~~--~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~ 225 (387)
+++|++. |.||+|-. .+.+.+++|.++|++||+++|+||+|+++.+.|..... ...+.++ +.|+||.++ +
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd-----i~s~sK~l~-~ 257 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD-----ILTSAKALG-G 257 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC-----EEEeccccc-C
Confidence 7777666 76666655 38899999999999999999999999998777653221 1122222 568999987 8
Q ss_pred ccceEEEEeeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-C
Q 038416 226 GWRLGWLVTSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-C 303 (387)
Q Consensus 226 g~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 303 (387)
|+|+||+++++ ++++.+... ...+++.+++.|+++.++|+...+ .+..+.++++++++.+.|+++. .
T Consensus 258 G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 326 (403)
T PRK05093 258 GFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQK 326 (403)
T ss_pred CcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999976 677777653 234567788899888887764322 2445677778888888887751 1
Q ss_pred CCC-CCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 304 ITC-PVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 304 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
... ...+..|.++|+.++.... ....+++..+++ .||.+.++. .+++|+++ ..+++++++++++|.+++
T Consensus 327 ~~~~~~~~~~G~~~~~~l~~~~~---~~~~~~~~~l~~-~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 327 YGVFSEIRGMGLLIGAELKPQYK---GRARDFLNAAAE-EGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEKAV 398 (403)
T ss_pred CCCeEeEeeCceEEEEEecCcch---hHHHHHHHHHHH-CCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 111 1234568888988753110 134567776654 599998753 47899986 458999999999999988
Q ss_pred HHh
Q 038416 381 QRH 383 (387)
Q Consensus 381 ~~~ 383 (387)
.++
T Consensus 399 ~~~ 401 (403)
T PRK05093 399 AKV 401 (403)
T ss_pred HHh
Confidence 754
No 170
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=1.1e-24 Score=202.49 Aligned_cols=318 Identities=19% Similarity=0.176 Sum_probs=215.6
Q ss_pred CCcHHHHHHHHHHhcCC--CCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc------C
Q 038416 25 SDSTVAEDAVVDALRTA--HYNCYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA------R 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~--~~~~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~ 95 (387)
.+.+.+.+++....... ....|+. .....++++.+++++ +++++++++++|+++++..++.++. +
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 104 (373)
T TIGR03812 31 NPHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEK 104 (373)
T ss_pred CchHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccC
Confidence 45566677777765432 1112221 111245556666666 3466788889999999988877654 4
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
+||+|+++.++|.++...++ ..|++++.++.+ .++.+|++++++++++++..++++.|+||||...+ +++|.+
T Consensus 105 ~g~~vl~~~~~h~~~~~~~~--~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~ 177 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEKAAE--MLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSK 177 (373)
T ss_pred CCcEEEECCcchHHHHHHHH--HcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHH
Confidence 67899999999999998888 899999999874 35678999999999877766666668999999976 788888
Q ss_pred HHHhcCcEEeecccccccccC----CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 176 TARNLGIIVIADEVYNHLAFG----STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
+|+++|+++|+|++|+.+... +.....+. +....-..+..|.+|+ +.++.++|+++..++ ++++.+.
T Consensus 178 l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~~~~s~~K~-~~~~~~~G~~~~~~~-------~~~~~l~ 248 (373)
T TIGR03812 178 IALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQSITIDPHKM-GLSPIPAGGILFRSK-------SYLKYLS 248 (373)
T ss_pred HHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCEEEECcccc-CCCcCCceEEEEeCH-------HHHhhhc
Confidence 899999999999999864321 00000110 0000111445678895 777788887775431 4555543
Q ss_pred hhhhc-c--------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 252 GCLNA-A--------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 252 ~~~~~-~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
..... . ++.+.....++...++...+..+++..+++.++++++++.|+++ ++..+..| ..+++.++++
T Consensus 249 ~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~v~~~~~- 325 (373)
T TIGR03812 249 VDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEP-VLNIVAFEVD- 325 (373)
T ss_pred ccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCC-CceEEEEEeC-
Confidence 21111 0 13344556666667766556778888899999999999999988 45423233 3445555554
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+..++...| .++||.+.++. .++++|++++ +++++++.+++.|++
T Consensus 326 -------~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -------DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -------CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 234566665 56699987653 3578999995 689999999999865
No 171
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.95 E-value=9e-25 Score=202.55 Aligned_cols=292 Identities=19% Similarity=0.256 Sum_probs=197.6
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCC
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNN 120 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g 120 (387)
.|+. ....+|++.+|++++ . +..+++++++.++..++.+++++||+|+++.+.|.++... +. ..|
T Consensus 61 r~~~-p~~~~Le~~lA~l~G------~--~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~--~~G 129 (398)
T PRK07504 61 RYSN-PTVDMFEKRMCALEG------A--EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLP--RYG 129 (398)
T ss_pred cCCC-chHHHHHHHHHHHhC------C--CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHh--hcC
Confidence 4433 467899999999983 2 3445577888999888888889999999999999875433 34 568
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
.++..++ ..|++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+.
T Consensus 130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~---- 195 (398)
T PRK07504 130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ---- 195 (398)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 8877764 25899999999999999999999999999987 788888899999999999999854321
Q ss_pred ccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH-HHHhhh-hccCCcchHHHHHHHHHhhhccHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD-SIKGCL-NAASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
.++ .+. ..+++.|++|.++.+|.++|++++.++ +++. .++... ..+..++++..+.+...|+.
T Consensus 196 ~~~-~~g---aDivv~S~sK~l~g~g~~~GG~vv~~~-------~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t---- 260 (398)
T PRK07504 196 KPL-ELG---AHIVVYSATKHIDGQGRCLGGVVLSDK-------AWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET---- 260 (398)
T ss_pred Cch-hhC---CCEEEeeccccccCCccceEEEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----
Confidence 122 222 238899999999999999865444331 3443 344332 33455666655555555543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
+..+.++..++++.+.+.|++.|++..+.+|. .|.++.+.+... ......+++.+ +=.
T Consensus 261 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~~~~~l-~~~ 334 (398)
T PRK07504 261 -LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG----KEAAFRFLNAL-KIV 334 (398)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC----HHHHHHHHHhC-Ccc
Confidence 67777788889999999998877665333332 244566666421 01122333332 211
Q ss_pred CeEEEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 343 SVIILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 343 gi~v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.++-|+.. +. ++.+|+|++. |+.+.+++.|.++++..+
T Consensus 335 ~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 335 RISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL--EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred eecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhhh
Confidence 2211112110 00 3579999999 567788888888887654
No 172
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.95 E-value=6.5e-25 Score=203.12 Aligned_cols=220 Identities=20% Similarity=0.211 Sum_probs=164.5
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
....++++.+++++ ..+++++++|+++|+..++.+++++||+|+++.+.|.+... .+. ..|.++..
T Consensus 61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~--~~G~~v~~ 130 (390)
T PRK08133 61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFA--RFGIETTF 130 (390)
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHH--HcCcEEEE
Confidence 45678899999988 34578999999999999999999999999999999976443 455 68988888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
+++. |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+..... .++ .
T Consensus 131 vd~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl-~ 195 (390)
T PRK08133 131 VDLT-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL-K 195 (390)
T ss_pred ECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-h
Confidence 8652 789999999999999999999999999986 789999999999999999998753221 122 1
Q ss_pred cCCCccEEEEecCcccccccccceE-EEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLG-WLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G-~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
... .+++.|+||.++.+|.++| ++++++ +.++.+..... .....+++.++.+..-+ +.+..+
T Consensus 196 ~g~---Divv~S~sK~~~g~g~~~GG~vv~~~--------~~~~~~~~~~~~~g~~~~~~~a~~~l~gl-----~tl~~R 259 (390)
T PRK08133 196 LGA---DVVIHSATKYLDGQGRVLGGAVVGSK--------ELMEEVFGFLRTAGPTLSPFNAWVFLKGL-----ETLSLR 259 (390)
T ss_pred hCC---cEEEeecceeecCCcceEeEEEEcCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHccc-----chHHHH
Confidence 122 3789999999988998885 455543 45565554433 33444554444332222 246777
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
.+++.+++..+.+.|++.|++..+.+|
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 778888899999999988766544444
No 173
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=8.1e-25 Score=204.88 Aligned_cols=328 Identities=15% Similarity=0.140 Sum_probs=215.7
Q ss_pred CCcHHHHHHHHHHhc--CCCCCCCC--C------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 25 SDSTVAEDAVVDALR--TAHYNCYS--P------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~--~~~~~~y~--~------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
|.|+.+.+++.+.+. +...+... . .....++|+.+++++ +.+++++++++|++++++.++.++.
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~g~t~al~~~l~~l~ 87 (404)
T PRK14012 14 PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTSGATESDNLAIKGAA 87 (404)
T ss_pred CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeCCHHHHHHHHHHHHH
Confidence 688999999988875 22111110 0 012456678888877 4567889999999999999988764
Q ss_pred ----CCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 ----RPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 ----~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++||.|+++.++|+++..... ....|.+++.++.+ .++.+|+++++++++++++++++++++||||..++
T Consensus 88 ~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~--- 162 (404)
T PRK14012 88 HFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQD--- 162 (404)
T ss_pred HhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhh---
Confidence 789999999999987644333 00468898888875 34568999999999999999999999999999976
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++|+++|+|++++. +.....+.....+ +++.|++|.++.. ++|++++++.......|.....
T Consensus 163 ~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~--g~G~l~~~~~~~~~~~~~~~g~ 233 (404)
T PRK14012 163 IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLKVD---LMSFSAHKIYGPK--GIGALYVRRKPRVRLEAQMHGG 233 (404)
T ss_pred HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCCCC---EEEEehhhccCCC--ceEEEEEecCCCCCCCceecCC
Confidence 78889999999999999999984 2222223333333 7778999976543 4899888763211111100000
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----CceEEEEEecCcccc
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP----QGAMFVMVKLNVSML 325 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~g~~~~~~~~~~~~ 325 (387)
-.......++++.....++.+++... +..+....++.+.+++++.+.|++++++.....+ .....+++.+.
T Consensus 234 ~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~---- 308 (404)
T PRK14012 234 GHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV---- 308 (404)
T ss_pred CccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc----
Confidence 00000012234444445555555432 2345566788888888999988887766532111 11223343332
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+..++...+ + ++.+.+|..|.. .+.+|++++ .+++|++.+++.|+++++.++
T Consensus 309 ----~~~~~~~~l-~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 309 ----EGESLIMAL-K--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred ----CHHHHHHhC-C--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 223444433 3 676766654422 368999995 589999999999999887764
No 174
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.7e-25 Score=202.28 Aligned_cols=289 Identities=14% Similarity=0.141 Sum_probs=199.5
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~ 124 (387)
.+...++++.++++++ .++.++++++++|+..++.+++++||+|+++.|+|.+.. ..+. ..|+++.
T Consensus 63 ~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~--~~Gi~v~ 132 (398)
T PRK08249 63 NPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLP--RMGVDVT 132 (398)
T ss_pred ChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHh--hCCeEEE
Confidence 3567899999999983 356677777899999999999999999999999998753 3345 6788877
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... .++.
T Consensus 133 ~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l~ 198 (398)
T PRK08249 133 LCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ----NPLA 198 (398)
T ss_pred EcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC----Cchh
Confidence 6542 4889999999989999999999999999988 777888899999999999999854321 1221
Q ss_pred ccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
... .+++.|++|.++.+|.++ |++++++ +++++++..+. .+...+++.++.+...++. +..
T Consensus 199 -~~~---Divv~S~sK~l~g~~~~~gG~vv~~~--------~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-----L~~ 261 (398)
T PRK08249 199 -LGA---DLVIHSATKFLSGHADALGGVVCGSK--------ELMEQVYHYREINGATMDPMSAYLILRGMKT-----LKL 261 (398)
T ss_pred -hCC---CEEeccCceecCCCCCceEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-----HHH
Confidence 222 278899999988777665 5555533 67777776654 3445666666655544443 566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEE
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (387)
+.++..++++.+.+.|++.|.+..+.+|. .|.++.+.+... ......+++.+ +=..+.+
T Consensus 262 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~----~~~~~~f~~~l-~l~~~~~ 336 (398)
T PRK08249 262 RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG----MDTVKRLLPKL-RYAHRAA 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC----HHHHHHHHHhC-CcceEcc
Confidence 77888889999999999876655444442 233455555310 00122333332 1111111
Q ss_pred EcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 347 LPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 347 ~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.-|+.. +. ++.+|+|++. |+.+.+++.|.++++..++
T Consensus 337 s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 337 NLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI--EDTEDLIADLEQAFAHLES 396 (398)
T ss_pred CCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHHhhh
Confidence 111110 00 2579999998 6778888888888877654
No 175
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.6e-24 Score=199.08 Aligned_cols=291 Identities=15% Similarity=0.162 Sum_probs=203.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeec
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYD 127 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~ 127 (387)
.....|++.+|++. +.+++++++|+++|+..++.+++++||+|+++.|+|.+....+. ....|+++..++
T Consensus 53 pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd 124 (388)
T PRK08861 53 PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD 124 (388)
T ss_pred chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC
Confidence 56789999999998 35899999999999999999999999999999999986443221 003566776664
Q ss_pred cCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 128 LLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .++ .+.
T Consensus 125 ~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~pl-~~G 189 (388)
T PRK08861 125 Q-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KPL-ELG 189 (388)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CCc-ccC
Confidence 2 4789999999889999999999999999998 677888889999999999999864321 122 123
Q ss_pred CCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHH
Q 038416 208 SIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIG 285 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 285 (387)
.+ +++.|++|.++. .+...|++++.+ +++.+.++..+. .+...+++..+.+..-|+. +.-+.+
T Consensus 190 aD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-----l~lR~~ 254 (388)
T PRK08861 190 AD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-----LGARMR 254 (388)
T ss_pred CC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-----HHHHHH
Confidence 33 899999999765 346788888754 246666665543 4566677776666555554 777888
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcC
Q 038416 286 LLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPG 349 (387)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 349 (387)
+..+++..+.+.|+..|.+..+.+|. .|.++.+.+... ......+++.+ +=..+.+.-|
T Consensus 255 ~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~----~~~~~~f~~~l-~l~~~~~s~G 329 (388)
T PRK08861 255 VHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS----FEQLKVFVKAL-ALFSLAESLG 329 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC----HHHHHHHHhcC-CcceEccCCC
Confidence 88999999999999887665454542 233455555310 00122333322 2111112212
Q ss_pred Ccc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 350 RTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 350 ~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+.. +. ++.||+|++. |+.+.+++.|.++++...+
T Consensus 330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 330 GVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL--EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred CCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHHHHHHh
Confidence 110 00 3579999999 6778888888888887665
No 176
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.95 E-value=7.3e-25 Score=201.85 Aligned_cols=294 Identities=16% Similarity=0.155 Sum_probs=201.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNN 120 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g 120 (387)
+..|+. .....|++.++++. ..+++++++|+++|+..++.+++++||+|+++.|+|.+....+. ....+
T Consensus 45 Y~R~~~-p~~~~le~~lA~l~--------g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGN-PTRDLLQQALAELE--------GGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCC-chHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 445544 45688999999988 24689999999999999999999999999999999986544332 00334
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
.++..++ ..|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..+...
T Consensus 116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 4554442 13789999999889999999999999999988 678888889999999999999864321
Q ss_pred ccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
.++. +.. .++++|++|.++ .++++.|++++.+ ++++++++..+. .+...+++..+.+..-++
T Consensus 182 ~pl~-~ga---Divv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----- 245 (382)
T TIGR02080 182 NPLA-LGA---DLVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLR----- 245 (382)
T ss_pred Cchh-hCC---CEEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccc-----
Confidence 1221 222 288899999975 5778999988754 257777766544 355666666555533333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
.+..+.++..+++..+.+.|+..|.+..+.+|. .|.++.+.+... ......+++.+ +-.
T Consensus 246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l-~~~ 320 (382)
T TIGR02080 246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG----EQTVRRFLGGL-SLF 320 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc----HHHHHHHHHcC-Ccc
Confidence 366678888899999999999877665444442 244555566421 00122333333 221
Q ss_pred CeEEEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 343 SVIILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 343 gi~v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.+.+.-|+.. +. ++.+|+|++. |+.+.+++.|.++++.
T Consensus 321 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl--E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 321 TLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL--EDADDLIADLEQGLRA 381 (382)
T ss_pred eEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 2222222111 00 3579999998 5677788888887763
No 177
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1e-24 Score=194.63 Aligned_cols=331 Identities=18% Similarity=0.193 Sum_probs=242.8
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.+.++.++++|.... .+++++ .+..+-+.+.+.++..++ ++. +-++++++++.++++++.++++|||+|++
T Consensus 14 ~~v~~~V~~am~~~~----~~h~s~--~F~~~~~~~~~~L~~v~~--t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv 85 (383)
T COG0075 14 VPVPPRVLLAMARPM----VGHRSP--DFVGIMKEVLEKLRKVFG--TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLV 85 (383)
T ss_pred CCCCHHHHHHhcCCC----CCCCCH--HHHHHHHHHHHHHHHHhc--CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEE
Confidence 368888887776644 334443 344555555555554444 233 55667888999999999999999999999
Q ss_pred cCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 103 PRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 103 ~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
...+.++ +.++++ .+|.++..+.. +.+..++++++++++++ +.+.|.+++...+||+..| +++|+++|+
T Consensus 86 ~~nG~FG~R~~~ia~--~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k 158 (383)
T COG0075 86 VVNGKFGERFAEIAE--RYGAEVVVLEV--EWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAK 158 (383)
T ss_pred EeCChHHHHHHHHHH--HhCCceEEEeC--CCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHH
Confidence 9888875 678889 99999998876 46668999999999984 5678999999999999965 899999999
Q ss_pred hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCC-----------CcccchhH
Q 038416 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPN-----------GILQNSGF 246 (387)
Q Consensus 179 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~-----------~~~~~~~~ 246 (387)
+||.++|+|.+.+. ++. ...+..+ +-.+++++..|+++ .|| +|.+..++.. ..+.-..+
T Consensus 159 ~~g~l~iVDaVsS~---Gg~-~~~vd~w---giDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~ 229 (383)
T COG0075 159 EHGALLIVDAVSSL---GGE-PLKVDEW---GIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKW 229 (383)
T ss_pred HcCCEEEEEecccC---CCc-ccchhhc---CccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHH
Confidence 99999999999984 232 2223333 33488888999986 466 6777765422 11100122
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEEecCccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFVMVKLNVSM 324 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~~~~~~~~~ 324 (387)
.+.+.+...+.++++.....++..+|+...++.++.+.++++++.+.+++.++.+ |++.+..+. ......+..|..
T Consensus 230 ~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g- 307 (383)
T COG0075 230 LKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG- 307 (383)
T ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC-
Confidence 2222222345678888889999999988778889999999999999999999998 788553221 111223334431
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e-CChHhHHHHHHHHHHHHHHhh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A-AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~-~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.+....+++++|+.+.+|.....+..|||+. + .+.+++..++.+|+.+++++.
T Consensus 308 ----~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 308 ----VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred ----CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 2344555578888899999988777789999999 4 578999999999999998864
No 178
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=6.2e-25 Score=190.88 Aligned_cols=310 Identities=23% Similarity=0.295 Sum_probs=198.8
Q ss_pred CCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH-HHHHHH-hhc----C--------CCCeEEEcCCCC
Q 038416 43 YNCY-SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA-IEISLS-VLA----R--------PGANILIPRPGY 107 (387)
Q Consensus 43 ~~~y-~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a-~~~~~~-~l~----~--------~g~~vl~~~p~~ 107 (387)
..+| +...|.+++|+..++++ ++++++|++..+++-. +.-++. +++ . +.-+.++|.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 3588 77889999999999999 6899999988666533 332222 221 1 123789999999
Q ss_pred cchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeCC--CCCccccCCHHHHHHHHHH-HHhcCc
Q 038416 108 PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIINP--GNPCGNVFSYQHLQKIART-ARNLGI 182 (387)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p--~nptG~~~~~~~~~~l~~~-~~~~~~ 182 (387)
.....+.+ .+|++++.+|+.++ ++|.+.+++++. +..|.+| |.| +||||+++|.+-+++++.+ +...++
T Consensus 135 DRHFai~E--~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m~~AA~DF 208 (425)
T PF12897_consen 135 DRHFAITE--HFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAMKTAAPDF 208 (425)
T ss_dssp HHHHHHHH--HCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHHHHHHHS--SSTT-
T ss_pred hHHHHHHH--hhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHHHHHhcCCcCCcCe
Confidence 99999999 99999999998654 689999999873 4456664 555 8999999999999999987 446799
Q ss_pred EEeeccccccccc-CCCCCc---cc----cccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 183 IVIADEVYNHLAF-GSTPYV---PM----GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 183 ~li~D~~~~~~~~-~~~~~~---~~----~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
.|+-|++|....+ ...+.. .+ ..-...++++...|+||. .++|..++++.++. +-++++.+..
T Consensus 209 RI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~ 279 (425)
T PF12897_consen 209 RIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHL 279 (425)
T ss_dssp EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHH
T ss_pred EEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHh
Confidence 9999999997655 222211 11 223456789999999999 89999999999976 6777777765
Q ss_pred h-ccCCcchHHHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCCCCCCCCceEEEEEecCccccc
Q 038416 255 N-AASHPVTFIQAAVPRIVDETN---EAFFAKIIGLLKETADICYERIKE-IP---CITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 255 ~-~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~l~~-~~---~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
. .+-++....|..-..++.+.+ ..++++..+.++-..+...+.|++ +. ++..|+.|.+|+|+++.+..
T Consensus 280 ~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~---- 355 (425)
T PF12897_consen 280 SVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD---- 355 (425)
T ss_dssp HHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST----
T ss_pred cCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC----
Confidence 3 567889999999999988743 355666666666666666666654 43 46558899999999988764
Q ss_pred CCCcHHHHHHHHHHhcCeEEEc-CCccCC-----CCeEEEEeeC-ChHhHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILP-GRTVGM-----KNWLRIAFAA-EPATLEDGLERIKAFC 380 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~-g~~~~~-----~~~~Ri~~~~-~~e~~~~~~~~l~~~~ 380 (387)
....-+.+++++.||.+.| |..|.. +..|||+++. +.++++.+++.+.-++
T Consensus 356 ---G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 356 ---GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCV 413 (425)
T ss_dssp ---T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHH
T ss_pred ---ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHH
Confidence 3445667788999999998 655533 4689999976 6799999999886655
No 179
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.9e-24 Score=199.17 Aligned_cols=296 Identities=18% Similarity=0.169 Sum_probs=205.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNN 120 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g 120 (387)
+..|+. .....|++.+|++.+ .+++++++|+++++..++.+++++||+|+++.|+|++....+. . ...+
T Consensus 46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 334444 467899999999873 3479999999999999999999999999999999986433222 0 0234
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
.++..++ ..|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... .
T Consensus 117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----~ 182 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----Q 182 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----C
Confidence 4555443 24789999999889999999999999999988 67888888899999999999986432 1
Q ss_pred ccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
.++ ....+ +++.|++|.++ .++...|++++.+ +++.+.++... ..+...+++.++.+...|+.
T Consensus 183 ~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---- 247 (386)
T PRK08045 183 NPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---- 247 (386)
T ss_pred Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----
Confidence 222 12222 88999999985 5667889988754 25666666543 35566788888877777765
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
+..+.+++.+++..+.+.|+..|.+..+.+|. .|.++.+.+... ......+++.| +=.
T Consensus 248 -l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l-~~~ 321 (386)
T PRK08045 248 -LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD----EQTLRRFLGGL-SLF 321 (386)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhc-cce
Confidence 78889999999999999999887665444442 233455555320 00122343333 211
Q ss_pred CeEEEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 343 SVIILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 343 gi~v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.+.-|+.. +. ++.+|+|++. |+.+.+++.|.++++...
T Consensus 322 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 322 TLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_pred eEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHHHHhh
Confidence 1121112111 00 3579999999 567788888888887654
No 180
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=6.1e-25 Score=201.69 Aligned_cols=331 Identities=13% Similarity=0.108 Sum_probs=214.3
Q ss_pred cccccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 3 ERKGQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
++.|-..++|. .|..+..-.-.+|+.+.++|+++..+ |. +..++++++.+++.+.+| .+++++++|+
T Consensus 3 ~~~~~~~~ina-~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~ 69 (363)
T TIGR01437 3 EKYGLKKVINA-SGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSA 69 (363)
T ss_pred ccCCCceEEEC-CcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCH
Confidence 34455555665 23322222335899999999998642 22 235667777777666544 3578999999
Q ss_pred HHHHHHHHHhhcCCCC---------------eEEEcCCCCcch----HHHhhccCCCceeeeeccCCCCCccCChhhHHH
Q 038416 83 SQAIEISLSVLARPGA---------------NILIPRPGYPLY----EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA 143 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~---------------~vl~~~p~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 143 (387)
|+|+.+++.+++++|| .|+++.|.|..| ...+. ..|.+++.++. ++.+|++++++
T Consensus 70 t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~--~~g~~~v~v~~----~~~~d~~~le~ 143 (363)
T TIGR01437 70 SAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVR--LGGGKVVEAGY----ANECSAEQLEA 143 (363)
T ss_pred HHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHH--hcCCeEEEEcC----CCCCCHHHHHH
Confidence 9999999999999888 899988777655 45666 78989888875 23589999999
Q ss_pred hhccCceEEE-EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc
Q 038416 144 LADENTVAIV-IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW 222 (387)
Q Consensus 144 ~~~~~~~~v~-l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~ 222 (387)
+++++|++++ +++|+||+|...+ +++|+++|+++|+++|+|++|+. . ......+.. .+++.|++|++
T Consensus 144 ai~~~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~---~---~~~~~~~g~---D~~~~S~~K~l 211 (363)
T TIGR01437 144 AITEKTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE---D---LQKYYRLGA---DLVIYSGAKAI 211 (363)
T ss_pred hcChhceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC---c---hHHHHHcCC---CEEEEeCCccc
Confidence 9999999776 5678999999888 67789999999999999999972 1 111112222 37789999974
Q ss_pred cccccceEEEEeeCCCCcccchhHHHHHHhhhhcc---CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 223 IVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA---SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 223 ~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
.|++.|+++.++ ++++.++...... .........++.++++... ....+..+...++++.+.+.|.
T Consensus 212 --~gp~~G~l~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~-~~~~~~~~~~~~~~~~l~~~L~ 280 (363)
T TIGR01437 212 --EGPTSGLVLGKK--------KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYL-STGKESGAEMVAKLTPFIEALN 280 (363)
T ss_pred --CCCceEEEEEcH--------HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHH-ccCcccHHHHHHHHHHHHHHHh
Confidence 577899998754 5666654322110 1111122233333333211 1122333344456677889999
Q ss_pred cCCCCCCCCCCC-ceE---EEEEecCcccccCCCcHHHHHHHHHHhcC--eEEEcCCccCCCCeEEEEe-eCChHhHHHH
Q 038416 300 EIPCITCPVKPQ-GAM---FVMVKLNVSMLEDIGDDLEFCLKLAKEES--VIILPGRTVGMKNWLRIAF-AAEPATLEDG 372 (387)
Q Consensus 300 ~~~~~~~~~~~~-~g~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~ 372 (387)
++|++.+...+. .+. ..-+.++... .+ .+..++...| ++++ |.+.+ .+...+.+|+++ ..+++|++.+
T Consensus 281 ~i~g~~~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~ 355 (363)
T TIGR01437 281 TLKGVSASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDII 355 (363)
T ss_pred cCCCeEEEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHH
Confidence 988887432111 111 1112232110 01 2456676666 5556 55554 355577899999 4578999999
Q ss_pred HHHHHHHH
Q 038416 373 LERIKAFC 380 (387)
Q Consensus 373 ~~~l~~~~ 380 (387)
+++|++++
T Consensus 356 ~~~l~~~~ 363 (363)
T TIGR01437 356 VERIREIV 363 (363)
T ss_pred HHHHHHhC
Confidence 99998753
No 181
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=1.7e-24 Score=199.71 Aligned_cols=282 Identities=17% Similarity=0.129 Sum_probs=201.0
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~ 124 (387)
.....+|++.++++.+ .++.++++++++|+..++.+++++||+|+++.+.|++... .+. ..|.++.
T Consensus 39 ~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~--~~g~~~~ 108 (369)
T cd00614 39 NPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLP--KLGIEVT 108 (369)
T ss_pred ChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHh--hcCeEEE
Confidence 4567899999999882 3577888889999999999999999999999999987653 344 6788887
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.++.+ |++++++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ ..++
T Consensus 109 ~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~----~~~~- 173 (369)
T cd00614 109 FVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYL----QRPL- 173 (369)
T ss_pred EeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhc----CChh-
Confidence 77642 588999999889999999999999999987 78889999999999999999986432 1111
Q ss_pred ccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
.+ +..+++.|++|.++.+| .+.|++++++ .+++++++.... .+...+++..+++...++. +..
T Consensus 174 ~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-----l~~ 238 (369)
T cd00614 174 EL---GADIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLKT-----LPL 238 (369)
T ss_pred hh---CCcEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-----HHH
Confidence 12 23488999999987665 7889999854 146777776543 4455666666655444543 566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEE
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKP----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (387)
+.++..++++.+.+.|++.|.+..+.+| ..|.++.+.+.. +.+.+..++..-.+..
T Consensus 239 r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--------~~~~~~~f~~~l~~~~ 310 (369)
T cd00614 239 RMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--------GLEAAKKFLNALKLFS 310 (369)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--------CHHHHHHHHHcCCcce
Confidence 7788888999999999998766544444 235566666641 1122233333333321
Q ss_pred ---EcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 347 ---LPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 347 ---~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+-|+.. +. ++.+|+|++. |+.+.+++.|.+++
T Consensus 311 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 311 LAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred EcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 111110 11 3579999999 67788888887765
No 182
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3.2e-24 Score=198.78 Aligned_cols=220 Identities=18% Similarity=0.195 Sum_probs=164.1
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc----hHHHhhccCCCceeeee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL----YEIHAAGSNNNLEARHY 126 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~ 126 (387)
....|++.++++.+ . ++.++++++++++..++.+++++||+|+++.|.|.+ +...+. ..|.++..+
T Consensus 61 ~~~~Le~~lA~l~g------~--~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~--~~g~~v~~v 130 (405)
T PRK08776 61 TRDLLGEALAELEG------G--AGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAK--KGHFALITA 130 (405)
T ss_pred HHHHHHHHHHHHhC------C--CceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHH--hcCcEEEEE
Confidence 45678888888762 2 334566667899999999999999999999999987 344455 567777776
Q ss_pred ccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc
Q 038416 127 DLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF 206 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 206 (387)
+. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... ...++. +
T Consensus 131 ~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~ 195 (405)
T PRK08776 131 DL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-F 195 (405)
T ss_pred CC-------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cCCccc-c
Confidence 54 3789999999889999999999999999955 8899999999999999999998522 122332 2
Q ss_pred CCCccEEEEecCccccccc-ccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 207 GSIVPVITLGSISKRWIVP-GWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 207 ~~~~~~~~i~s~sK~~~~~-g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
..+ +++.|.+|.++.+ +...|++++++ +++.+++..... .+..++++..+.+...+ ++++.+.
T Consensus 196 gaD---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-----~tl~~r~ 260 (405)
T PRK08776 196 GAD---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGL-----RTLDARL 260 (405)
T ss_pred cCC---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----CcHHHHH
Confidence 222 8899999998755 57789888754 256666655433 34456676666665444 3478899
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 285 GLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
++..+++..+.+.|++.|.+..+.+|
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~V~yP 286 (405)
T PRK08776 261 RVHQENADAIAALLDGHAAVNQVYYP 286 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 99999999999999987765544443
No 183
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=2.1e-24 Score=198.80 Aligned_cols=287 Identities=15% Similarity=0.130 Sum_probs=190.4
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCc----chHHHhhccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP----LYEIHAAGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~----~~~~~~~~~~~g~~~~ 124 (387)
.....+|++.++++++ .+ ..+++ +++++++..++.+++++||+|+++.|.|. .+...++ ..|.++.
T Consensus 44 ~p~~~~L~~~lA~l~g------~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~--~~G~~v~ 113 (376)
T PRK06460 44 NPTVLELTKKIVELEN------AE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLK--NWGVNVD 113 (376)
T ss_pred CccHHHHHHHHHHHhC------CC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHH--hhCcEEE
Confidence 4578999999999983 22 34444 55678999999999999999999987664 3445667 7898888
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.++.. +.+.+++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+... . ..++
T Consensus 114 ~~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~-~---~~~l- 178 (376)
T PRK06460 114 ASNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI-N---QKPL- 178 (376)
T ss_pred EECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc-c---CChh-
Confidence 77642 223455555778999999999999999998 4567888899999999999997531 1 1111
Q ss_pred ccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
. .+..+++.|+||.++. .+.+.||+++++ ++++++++... .+.+.++.. +..++. ...+++.
T Consensus 179 --~-~~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~~---a~~~l~--~~~~l~~ 242 (376)
T PRK06460 179 --E-LGADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPHA---AYLTLR--GIKTLKI 242 (376)
T ss_pred --h-cCCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHHH---HHHHHh--chhhHHH
Confidence 1 1235889999999753 236799998865 67888876543 333333322 222222 2466788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEE
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKP----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (387)
+.+++.++++.+.+.|++.|.+..+.+| ..|.++.+.+... ......+++.+ +-..+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~----~~~~~~~~~~l-~~~~~~~ 317 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG----QESALKVMKSL-KLIIPAQ 317 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc----HHHHHHHHHhC-Ccceecc
Confidence 8999999999999999988766545454 2344555566421 01122333332 1101111
Q ss_pred E----------cCCc----c--------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 347 L----------PGRT----V--------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 347 ~----------~g~~----~--------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
. |... + +. ++.+|+|++. |+.+.+++.|.+++..+
T Consensus 318 s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 318 TLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI--EDVNDLIEDLDRALSTL 375 (376)
T ss_pred CCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhh
Confidence 1 1100 0 01 3579999999 67777888888888654
No 184
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=3.3e-24 Score=199.13 Aligned_cols=220 Identities=19% Similarity=0.208 Sum_probs=164.1
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~ 125 (387)
....+|++.++++++ .++.+++++++.|+..++.+++++||+|+++.|.|.... ..+. ..|+++..
T Consensus 65 p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~--~~G~~v~~ 134 (403)
T PRK07503 65 PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLG--EFGVTVRH 134 (403)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHh--hCCEEEEE
Confidence 457899999999883 234677778889999999999999999999999987532 3445 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.. |++++++++++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+.... + .++.
T Consensus 135 vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~-~---~~l~- 199 (403)
T PRK07503 135 VDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL-Q---RPLE- 199 (403)
T ss_pred eCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cchh-
Confidence 7652 689999999889999999999999999976 78888999999999999999985422 1 1221
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh--hh-ccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC--LN-AASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
+.. .+++.|++|.++.+| .+.|+++.++ +++++++.. .. .+..++++.++.+...|+ .+.
T Consensus 200 ~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-----tl~ 263 (403)
T PRK07503 200 LGA---DLVVHSATKYLGGHGDITAGLVVGGK--------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-----TLA 263 (403)
T ss_pred hCC---CEEEccccccccCCCceeEEEEEcCH--------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-----hHH
Confidence 222 388999999998765 7788888543 677777633 22 344556655555544443 366
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
.+.++..+++..+.+.|++.|.+..+.+|
T Consensus 264 ~r~~~~~~na~~~a~~L~~~p~v~~V~~P 292 (403)
T PRK07503 264 LRMDRHCASAQAVAEWLARHPAVELVHYP 292 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 67777778888888899887765544333
No 185
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=2.8e-24 Score=199.23 Aligned_cols=226 Identities=17% Similarity=0.172 Sum_probs=172.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc----hHHHhhccC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL----YEIHAAGSN 118 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~----~~~~~~~~~ 118 (387)
+..|+. ....+|++.++++. ..++.+++++++.|+..++.+++++||+|+++...|.+ +...++ .
T Consensus 64 Y~r~~~-p~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~--~ 132 (403)
T PRK07810 64 YSRYGN-PTVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILP--R 132 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHH--H
Confidence 334444 45789999999998 34588888889999999999999999999998866644 345566 7
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
.|.++..++. .|++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 133 ~G~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-- 200 (403)
T PRK07810 133 WGVETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ-- 200 (403)
T ss_pred cCcEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC--
Confidence 8999888863 2889999999999999999999999999976 888899999999999999999853321
Q ss_pred CCccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHH-HHHhh-hhccCCcchHHHHHHHHHhhhc
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVD-SIKGC-LNAASHPVTFIQAAVPRIVDET 275 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 275 (387)
.++ ... ..+++.|++|.++..|.++ |++++++ +.+. .++.. ...+..++++.++.+...|+.
T Consensus 201 --~~~-~~g---aDivv~S~tK~l~g~g~~~gG~v~~~~--------~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t- 265 (403)
T PRK07810 201 --RGL-PLG---ADVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPALSAFNAWVLLKGLET- 265 (403)
T ss_pred --Chh-hcC---CcEEEccCCceecCCcCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-
Confidence 112 122 2388999999998888777 7777654 3333 34433 234556777777776666654
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 276 NEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+..+.++..+++..+.+.|++.|.+..+.+|
T Consensus 266 ----l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 ----LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 7788888888999999999988877655544
No 186
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=4e-24 Score=198.19 Aligned_cols=332 Identities=11% Similarity=0.091 Sum_probs=213.1
Q ss_pred CCCCCCCcHHHHHHHHHHhcCC------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTA------HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.+++++.++++.- ....|+....+.+|++.+|++++. .+.+++++|.+ ++..++.++
T Consensus 7 dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~-a~~~~i~~l 78 (392)
T PLN03227 7 DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAS-TTSSTVAAF 78 (392)
T ss_pred CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHH-HHHHHHHHh
Confidence 3457789999999999998751 122466666789999999999932 24555555544 555777788
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-----------cCceEEEEeCCCCCcc
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-----------ENTVAIVIINPGNPCG 162 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~l~~p~nptG 162 (387)
+++||.|+++++.|.++...+. ..+.++..++..+. -+++.+.+.+. +++++|++.+++|++|
T Consensus 79 ~~~GD~Vl~~~~~h~s~~~~~~--l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G 152 (392)
T PLN03227 79 AKRGDLLVVDRGVNEALLVGVS--LSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTG 152 (392)
T ss_pred CCCCCEEEEeccccHHHHHHHH--HcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCC
Confidence 9999999999999999887777 67777776654311 13444443432 3578888888999999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC-Cccccc--cCC-CccEEEEecCcccccccccceEEEEeeCCC
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP-YVPMGV--FGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~--~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
.+++ ++++.++|++||+++|+||+|+ +...|.. ...... ..+ .+..+++.|++|.++.. .|++++++
T Consensus 153 ~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v~~~~-- 223 (392)
T PLN03227 153 TLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMTVGSE-- 223 (392)
T ss_pred cccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEEecCH--
Confidence 9988 7789999999999999999998 3322221 111111 111 23358888999986533 48887764
Q ss_pred CcccchhHHHHHHhhh-h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC--------
Q 038416 239 GILQNSGFVDSIKGCL-N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP-------- 307 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------- 307 (387)
++++.++... . ++.+.+++.+.++...+....+ .++..++++++.+++++.|++. ++..+
T Consensus 224 ------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~ 294 (392)
T PLN03227 224 ------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLV 294 (392)
T ss_pred ------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccccccccccc
Confidence 5666665432 1 2223335556655555543211 2456677788888888888752 22111
Q ss_pred -CCCCceEEEEEecCcccccC-CC---cHHHHHHHHHHhcCeEEEcCC-------ccCCCCeEEEEee--CChHhHHHHH
Q 038416 308 -VKPQGAMFVMVKLNVSMLED-IG---DDLEFCLKLAKEESVIILPGR-------TVGMKNWLRIAFA--AEPATLEDGL 373 (387)
Q Consensus 308 -~~~~~g~~~~~~~~~~~~~~-~~---~~~~~~~~ll~~~gi~v~~g~-------~~~~~~~~Ri~~~--~~~e~~~~~~ 373 (387)
.....++++.+.+....... .. ...++...+ .++|+.+.+.. .+-.+..+|++++ +++|++++++
T Consensus 295 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~ 373 (392)
T PLN03227 295 ITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLL 373 (392)
T ss_pred cCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHH
Confidence 01223556666664211000 00 012454444 56799886422 1222567899994 6899999999
Q ss_pred HHHHHHHHHhh
Q 038416 374 ERIKAFCQRHA 384 (387)
Q Consensus 374 ~~l~~~~~~~~ 384 (387)
+.|++++++..
T Consensus 374 ~~l~~~~~~~~ 384 (392)
T PLN03227 374 TVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHH
Confidence 99999997754
No 187
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=2.3e-24 Score=199.08 Aligned_cols=316 Identities=13% Similarity=0.097 Sum_probs=213.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCC------CC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---
Q 038416 25 SDSTVAEDAVVDALRTAHYNCY------SP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL--- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y------~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l--- 93 (387)
+.|+.+.+++.+.+.....+.. .. ..-..++|+.+++++ +.++++|++|+|++++++.++..+
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~~ 83 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMHF 83 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 6889999999888754211111 01 112456677777777 356789999999999988877664
Q ss_pred -cCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 94 -ARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 94 -~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
.++||+|++....|+++..... ....|.+++.++++ .++.+|+++++++++++++++++++++|+||...| ++
T Consensus 84 ~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~ 158 (364)
T PLN02651 84 YKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VE 158 (364)
T ss_pred ccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HH
Confidence 4688999999988876543322 01568888888874 34568999999999999999999999999999987 78
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
+|.++|+++|+++++|.+++. +.-+..+..++. .+++.|.+|+++.+| +|++++++.....-+|.+...-.
T Consensus 159 ~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~---D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~~ 229 (364)
T PLN02651 159 EIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGV---DLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGGQ 229 (364)
T ss_pred HHHHHHHHcCCEEEEEcchhh----CCcccCcccCCC---CEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCCc
Confidence 889999999999999999985 222223333433 388899999754444 89998876322111121111000
Q ss_pred hhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCC--CCc--eEEEEEecCccccc
Q 038416 252 GCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVK--PQG--AMFVMVKLNVSMLE 326 (387)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~--~~~--g~~~~~~~~~~~~~ 326 (387)
......++++..+..++.++++...+. .++..++.++.++++.+.|++ ++++.+... +.. ...+.+.++.
T Consensus 230 ~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~---- 304 (364)
T PLN02651 230 ERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY---- 304 (364)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC----
Confidence 001124577777888888887764443 477778888899999998875 677775532 111 1233434432
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLE 370 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~ 370 (387)
.+..++...| .+ |.+..|..|.. .+.+|+|++ ++++|++
T Consensus 305 --~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 305 --VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred --CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 1455666666 43 98988876532 268999995 5777764
No 188
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=3.9e-24 Score=197.58 Aligned_cols=224 Identities=19% Similarity=0.236 Sum_probs=166.6
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcch----HHHhhccCCC
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY----EIHAAGSNNN 120 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~----~~~~~~~~~g 120 (387)
.|+. ....+|++.+++++ +.+++++++|+++|+..++.+++++||+|+++.+.|.+. ...+. ..|
T Consensus 50 r~~~-p~~~~le~~la~l~--------g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~--~~g 118 (380)
T TIGR01325 50 RYAN-PTVAAFEERIAALE--------GAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILP--RFG 118 (380)
T ss_pred cCCC-chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHH--HhC
Confidence 4443 45789999999987 235788899999999999999999999999999888653 33456 688
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
.++..++.. |++++++++++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+.....
T Consensus 119 ~~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~---- 184 (380)
T TIGR01325 119 IEVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ---- 184 (380)
T ss_pred CEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 888887652 689999999889999999999999999976 888899999999999999999854321
Q ss_pred ccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
.++ .+.. .+++.|++|.++.+|.++ |++++++ ++++.++.... .+...+++..+.+...+ .
T Consensus 185 ~pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~~~g~~~~p~~a~~~l~~l-----~ 247 (380)
T TIGR01325 185 QPL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLRHTGPAMSPFNAWVLLKGL-----E 247 (380)
T ss_pred Cch-hhCC---CEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHHhhCCCCCHHHHHHHHhcc-----C
Confidence 122 1222 388889999998888776 6666654 57777766543 33344444443333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 279 FFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
.+..+.++..++++.+.+.|+++|.+..+.+|
T Consensus 248 tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp 279 (380)
T TIGR01325 248 TLSLRMQKQFDSALAIAEWLQAQPQVQAVYYP 279 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 36667888888999999999988766644443
No 189
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=3.9e-24 Score=197.88 Aligned_cols=285 Identities=17% Similarity=0.190 Sum_probs=194.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcch----HHHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY----EIHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~----~~~~~~~~~g~~~~~ 125 (387)
....+|++.+|++++ .+..+++++++.|+..++.+++++||+|+++.|.|... ...+. ..|.++..
T Consensus 59 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~--~~G~~~~~ 128 (391)
T TIGR01328 59 PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALT--KFGIQVDF 128 (391)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHh--cCCeEEEE
Confidence 456789999999983 34578888889999999999999999999999988643 34445 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
+++. |++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.... +. ++.
T Consensus 129 vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~---~~~- 193 (391)
T TIGR01328 129 INMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TN---PVA- 193 (391)
T ss_pred ECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CC---chh-
Confidence 7652 789999999889999999999999999977 77888889999999999999985332 11 221
Q ss_pred cCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhh--h-ccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCL--N-AASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
... .+++.|++|.++.+|.++ |++++++ +++++++... . .+...++...+.+...++. +.
T Consensus 194 ~g~---Divv~S~sK~lgg~g~~~gG~v~~~~--------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t-----l~ 257 (391)
T TIGR01328 194 LGV---DVVVHSATKYIGGHGDVVAGLICGKA--------ELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT-----LN 257 (391)
T ss_pred cCC---CEEEccccccccCCCCceEEEEEcCH--------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc-----HH
Confidence 222 288899999998888764 6665543 6777776532 1 2334455444444443433 56
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI 345 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (387)
.+.++..++++.+.+.|++.|.+..+.+|. .|.++.+.+... ......+++.+ +=..+.
T Consensus 258 ~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~----~~~~~~f~~~l-~~~~~~ 332 (391)
T TIGR01328 258 IRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG----FAGAKKLLNNL-KLIRLA 332 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC----HHHHHHHHHhC-CcceEe
Confidence 677888888999999999887765444442 233455555310 01122333332 211111
Q ss_pred EEcCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 346 ILPGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 346 v~~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
..-|+... . ++.+|+|++. |+.+.+++.|.++++.
T Consensus 333 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 333 VSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL--EDADDLIADLKQALDA 390 (391)
T ss_pred cCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHHhh
Confidence 11121110 0 3479999998 6788888888888765
No 190
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.94 E-value=3.4e-24 Score=200.24 Aligned_cols=340 Identities=17% Similarity=0.191 Sum_probs=219.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC-CC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA-HY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.++|..-|....+..+. +|.+.+|+++++.+. .. ..|. .....+|.+.++++. ..+.+++++|+++|+
T Consensus 40 ~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~~~sGseA~ 109 (406)
T PRK12381 40 EYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT--------FADRVFFCNSGAEAN 109 (406)
T ss_pred EEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccC-CHHHHHHHHHHHhhC--------CCCeEEEcCCcHHHH
Confidence 45555444332344555 889999999998752 11 1111 111234444444433 246999999999999
Q ss_pred HHHHHhhcC--------CCCeEEEcCCCCcchHHHhhccCCCcee-e---eeccCC--CCCccCChhhHHHhhccCceEE
Q 038416 87 EISLSVLAR--------PGANILIPRPGYPLYEIHAAGSNNNLEA-R---HYDLLP--EKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 87 ~~~~~~l~~--------~g~~vl~~~p~~~~~~~~~~~~~~g~~~-~---~~~~~~--~~~~~~~~~~l~~~~~~~~~~v 152 (387)
+.+++.... .+.+|+..+++|++...... ..+... . ..++.+ ..-...|++.+++.+++++.+|
T Consensus 110 e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aav 187 (406)
T PRK12381 110 EAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTV--SAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAV 187 (406)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHH--hhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEE
Confidence 999998531 34689999999998764433 222111 0 001110 0001237889999887666666
Q ss_pred EEeCCCCCccccC--CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINPGNPCGNVF--SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p~nptG~~~--~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
++ +|.+++|-+. +.+.+++|.++|++||+++|+||+|.++.+.|.... ...+..... +.+++|.++ +|+|+|
T Consensus 188 ii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~-~~~~~v~pD---i~t~sK~l~-gG~~ig 261 (406)
T PRK12381 188 IV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYA-YMHYGVTPD---VLTTAKALG-GGFPIG 261 (406)
T ss_pred EE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhh-hHhhCCCCC---EEEehhhhh-CCCceE
Confidence 55 7888777543 689999999999999999999999998876664322 112221111 358999976 789999
Q ss_pred EEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCC
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-CITCPV 308 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 308 (387)
|+++++ ++++.+.... ..+++.+++.+.++.+.|+...+ .+..++++++.+++.+.|+++. ....+.
T Consensus 262 ~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 330 (406)
T PRK12381 262 AMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFS 330 (406)
T ss_pred EEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 999976 6777776533 34567788888888887764322 2456777777777877777651 121111
Q ss_pred -CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 309 -KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 309 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
....|.++++.++.... .....+. ..+.++||.+.+.. ++.+|++++ .+++++++++++|.++++++..
T Consensus 331 ~vrg~Gl~~~~~l~~~~~---~~~~~~~-~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 331 EIRGLGLLIGCVLNAEYA---GKAKQIS-QEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred EEecCeEEEEEEecCchh---hHHHHHH-HHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 23457777877753100 0123444 44567799997642 468999985 6899999999999999987653
No 191
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=4.8e-24 Score=197.65 Aligned_cols=311 Identities=20% Similarity=0.247 Sum_probs=226.5
Q ss_pred CCcHHHHHHHHHHhcCCCCC----CCCC----CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAHYN----CYSP----TLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~----~y~~----~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l-- 93 (387)
+.|+.+.+++.+.+.....+ .+.. .....+.|+.+++++ ++++ ++|++++|++++++.++.++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~~ 83 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLLN 83 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhcccc
Confidence 68999999999987643111 1111 123457788888888 4566 79999999999999999999
Q ss_pred -cCCCCeEEEcCCCCcchH----HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 94 -ARPGANILIPRPGYPLYE----IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 94 -~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
.++|++|++..-.|++.. ...+ ..|.++..++.+.. ..+|+++++++++++++++++++.+|.||+..|
T Consensus 84 ~~~~g~~vl~~~~~~~s~~~~~~~~~~--~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p-- 157 (371)
T PF00266_consen 84 PLKPGDEVLVTSNEHPSNRYPWEEIAK--RKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP-- 157 (371)
T ss_dssp HGTTTCEEEEEESSHHHHHHHHHHHHH--HTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS--
T ss_pred ccccccccccccccccccccccccccc--cchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee--
Confidence 789999999999998654 4555 68999988887533 367899999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|.++|+++|+++++|.+++. +.....+..++.| +++.|.+|.+|.+| +|+++.++ +.++
T Consensus 158 -i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~ 219 (371)
T PF00266_consen 158 -IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP--------EAIE 219 (371)
T ss_dssp -HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH--------HHHH
T ss_pred -eceehhhhhccCCceeEechhcc----ccccccccccccc---eeeecccccCCCCc--hhhheehh--------hhhh
Confidence 88899999999999999999995 2233334444443 88999999656666 79999886 4555
Q ss_pred HHHhhh---------------------h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 249 SIKGCL---------------------N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 249 ~~~~~~---------------------~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
+++... . ..++++.+...++..+++...+..+++..++...+.+++.+.|++++++..
T Consensus 220 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~ 299 (371)
T PF00266_consen 220 RLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEV 299 (371)
T ss_dssp HHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred ccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeE
Confidence 553111 0 123566777777777877766777888899999999999999999987774
Q ss_pred CCC---CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------CCCeEEEEee--CChHhHHHH
Q 038416 307 PVK---PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------MKNWLRIAFA--AEPATLEDG 372 (387)
Q Consensus 307 ~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~~Ri~~~--~~~e~~~~~ 372 (387)
... +..+..+.+.++. .+...+...| ++.||.+..|..+. ..+.+|+|++ .+++|++++
T Consensus 300 ~~~~~~~~~~~i~~~~~~~------~~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 300 LGPDDEPRRPSIVSFNLPG------SDADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSSCGGBGTTEEEEEETT------SSHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eeecccccccceEEEeecC------CCHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 321 2223344555543 1455565555 55599999987665 3589999995 588999864
No 192
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=7.6e-24 Score=199.28 Aligned_cols=325 Identities=17% Similarity=0.104 Sum_probs=207.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHH----HHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARR----GIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~----~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
++++.+++++...+......+++ .......+++ .+++++ + ++...|++++ +++++..++.+++
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~----g--~~~~~i~~~s-gt~al~~~l~~l~ 108 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF----G--AEYANVQPHS-GSQANAAVYFALL 108 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceeeecCC-chHHHHHHHHHhc
Confidence 37899999987765322111111 1111223333 445555 3 3445566555 5779999999999
Q ss_pred CCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHH
Q 038416 95 RPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++||+|+++.|+|.++.. .......|.+++.++++. +++.+|++++++++++ +++++++++++++ ...+ +
T Consensus 109 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~--~~~~---~ 182 (416)
T PRK00011 109 KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGASAYS--RPID---F 182 (416)
T ss_pred CCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECCCcCC--CccC---H
Confidence 999999999999975432 111113456777777643 2467999999999865 7888887765543 4434 8
Q ss_pred HHHHHHHHhcCcEEeecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
++|.++|+++|+++|+|++|+. +.+.+.....+. . ..++++|++|++ +|.|.||+++++ +++++.
T Consensus 183 ~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~i~~~~-------~~~~~~ 248 (416)
T PRK00011 183 KRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGLILTND-------EELAKK 248 (416)
T ss_pred HHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceEEEeCC-------HHHHHH
Confidence 8999999999999999999863 222222122222 1 237799999974 788899999853 257777
Q ss_pred HHhhhhc--cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 250 IKGCLNA--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 250 ~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
++..... ..++......++..++....+.+++++.+++.++++.+++.|+++ ++.+......++++|+.++...
T Consensus 249 l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~--- 324 (416)
T PRK00011 249 INSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG--- 324 (416)
T ss_pred HHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC---
Confidence 7655431 122233333333333333233457888899999999999999987 6763311123478888875321
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCc-c-----CCCCeEEEEe------eCChHhHHHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRT-V-----GMKNWLRIAF------AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~-~-----~~~~~~Ri~~------~~~~e~~~~~~~~l~~~~~~ 382 (387)
. +..++.. .++++||.+..+.. + ..+..+|++. +.++++++.+++.|++++..
T Consensus 325 ~-~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 325 L-TGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred C-CHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 1 3344544 45778999974321 1 1245799965 34689999999999887764
No 193
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.94 E-value=2.9e-24 Score=202.24 Aligned_cols=345 Identities=14% Similarity=0.065 Sum_probs=220.0
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+.+.+-|.....-+ -.+|.+.+++++++.+... .+.+..+..+|++.|++++. ..+++++++|+++|++
T Consensus 48 ~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~e 118 (423)
T TIGR00713 48 NEYIDYVLSWGPLILG-HAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEATM 118 (423)
T ss_pred CEEEEccccccccccC-CCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHHH
Confidence 3455655544321111 2678999999999986532 22234567889999988772 2368999999999999
Q ss_pred HHHHhhc--CCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCC-------CCc---cCChhhHHHhhc---cCceE
Q 038416 88 ISLSVLA--RPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPE-------KRW---EVDLDGVEALAD---ENTVA 151 (387)
Q Consensus 88 ~~~~~l~--~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~-------~~~---~~~~~~l~~~~~---~~~~~ 151 (387)
.+++... ..+++|+...++|+++...+. .+..+......+..+. ... .-|+++++++++ +++.+
T Consensus 119 ~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 198 (423)
T TIGR00713 119 SAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAG 198 (423)
T ss_pred HHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEE
Confidence 9998743 245899999999998754333 0011111111111000 000 017889998886 45666
Q ss_pred EEEe-CCCCCccccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce
Q 038416 152 IVII-NPGNPCGNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL 229 (387)
Q Consensus 152 v~l~-~p~nptG~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~ 229 (387)
|++. .++| +|.+++ .+.+++|.++|++||+++|+||+|.++.++...........++ +.++||.++ +|+|+
T Consensus 199 vi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD-----i~t~sK~l~-~G~pi 271 (423)
T TIGR00713 199 VIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD-----LTTLGKIIG-GGLPV 271 (423)
T ss_pred EEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc-----hhhhhhhhc-CCCce
Confidence 7664 5667 788877 6889999999999999999999999885432111111122222 347999987 88999
Q ss_pred EEEEeeCCCCcccchhHHHHHHhh----hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKGC----LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
||+++++ ++.+.+... ...+++.+++.+.++.+.|+...+ ...++..+...+.++.+.+.++++ ++
T Consensus 272 g~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~ 342 (423)
T TIGR00713 272 GAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GI 342 (423)
T ss_pred eeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 9999976 677777532 123557889999988888875432 355666666667777777777766 33
Q ss_pred CCCCCCCceEEEEEecCcccccC-----CCc---HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSMLED-----IGD---DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
... ....|.++.+.+......+ ..+ ...+...++ ++||.+.++. .+.+|+++..+++++++++++|
T Consensus 343 ~~~-v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~l~~~~t~~~i~~~~~~l 416 (423)
T TIGR00713 343 PHT-VNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ----FEACFLSAAHTEEDIENTIEAA 416 (423)
T ss_pred CeE-EEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC----ccceeeECCCCHHHHHHHHHHH
Confidence 311 1122334444332111000 001 124555554 5799987642 2468999888999999999999
Q ss_pred HHHHHHh
Q 038416 377 KAFCQRH 383 (387)
Q Consensus 377 ~~~~~~~ 383 (387)
.++++++
T Consensus 417 ~~~l~~~ 423 (423)
T TIGR00713 417 EEVFAEL 423 (423)
T ss_pred HHHHhhC
Confidence 9988753
No 194
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=8.6e-25 Score=201.36 Aligned_cols=316 Identities=12% Similarity=0.089 Sum_probs=212.4
Q ss_pred CCcHHHHHHHHHHhcCCCC--CCCCCC------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 25 SDSTVAEDAVVDALRTAHY--NCYSPT------LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~--~~y~~~------~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
++|+.+.+++.+.+..... ..+... ....++|+.+++++ +.++++|++++|+++++..++.++.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 6889999999988753211 111110 12457778888887 4577899999999999999998875
Q ss_pred --CCC-CeEEEcCCCCcchHHH---hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 95 --RPG-ANILIPRPGYPLYEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 95 --~~g-~~vl~~~p~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++| +.|++....|+++... ++ ..|.+++.++++ .++.+|+++++++++++++++++++++||||..+|
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~--~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~-- 156 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALE--RNGFTVTYLPVD--ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP-- 156 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHH--hcCCEEEEEccC--CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC--
Confidence 356 7788888777765433 44 578999988875 34568999999999888999999999999999987
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc--cchhH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL--QNSGF 246 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~--~~~~~ 246 (387)
+++|.++|+++|+++|+|++++... ....+.... -.+++.|.+|+++++| +|++++++..... ..|.+
T Consensus 157 -~~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~~---~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~ 226 (353)
T TIGR03235 157 -IREIAEVLEAHEAFFHVDAAQVVGK----ITVDLSADR---IDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIM 226 (353)
T ss_pred -HHHHHHHHHHcCCEEEEEchhhcCC----ccccccccC---CCEEEeehhhcCCCCc--eEEEEEccCcccccccCcee
Confidence 7888999999999999999988522 122222222 2377889999876666 7999887631100 00000
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEEecCccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM--FVMVKLNVSM 324 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~--~~~~~~~~~~ 324 (387)
...-.......++++.....++.++++.. ....+.+.++++++++++++.|++ +++++...+.... ++.+.++.
T Consensus 227 ~~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~-- 302 (353)
T TIGR03235 227 FGGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG-- 302 (353)
T ss_pred eCCCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC--
Confidence 00000000123456666777777777643 345678889999999999999988 4777443332211 22333331
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCC----CeEEEEeeCChHhHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMK----NWLRIAFAAEPATLEDG 372 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~----~~~Ri~~~~~~e~~~~~ 372 (387)
.+..++...| ++ +|.+.+|..|... ..+|.+++.+++++..+
T Consensus 303 ----~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 303 ----VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred ----cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 1445555555 55 8999999888653 26788887776655443
No 195
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.94 E-value=7.2e-24 Score=194.69 Aligned_cols=286 Identities=16% Similarity=0.199 Sum_probs=195.9
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNN 120 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g 120 (387)
+..|+. ....+|++.++++. . ++.++++++++++..++.+++++||+|+++.|+|+++...+. ....|
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 334544 57899999999986 1 356666777889999999999999999999999988765432 01578
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
+++..++.... .+ .+.+++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.... +.
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~--~~-- 177 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL--GQ-- 177 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc--cc--
Confidence 88888876321 11 23458899999999999998765 8999999999999999999986311 21
Q ss_pred ccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
.++. +.. .++++|++|+++ .+|+++||+++++ +++++.++..+. .+..++++..+.+...++.
T Consensus 178 ~p~~-~g~---Divv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---- 242 (366)
T PRK07582 178 RPLE-LGA---DLVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---- 242 (366)
T ss_pred Cchh-cCC---cEEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----
Confidence 1221 222 278899999974 4679999999753 257777766543 3455666666655555543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 279 FFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
+..+.++.++++..+.+.|++.|.+..+.+|. .|.++.+.+. + .+.+.+.+.+.
T Consensus 243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~-~~~~~~~~~~l 312 (366)
T PRK07582 243 -LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------D-AAAAERFVAAS 312 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------C-HHHHHHHHHhC
Confidence 56677888899999999999887766554332 2445555553 1 23334444555
Q ss_pred CeEEEc---CCcc---------C--C-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 343 SVIILP---GRTV---------G--M-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 343 gi~v~~---g~~~---------~--~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
++.... |+.. + . ++.+|+|++. |+.+.+++.|.+++++
T Consensus 313 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl--E~~~dli~dl~~al~~ 365 (366)
T PRK07582 313 RLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI--EDTDDLVADLERALDA 365 (366)
T ss_pred CcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 654431 1100 0 1 3579999998 4566677777777754
No 196
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.1e-23 Score=194.70 Aligned_cols=288 Identities=20% Similarity=0.179 Sum_probs=192.0
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHY 126 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~ 126 (387)
.....+|++.++++.+. +..++++++++|+..++.+++++||+|+++.|+|.+....+. ....|+++..+
T Consensus 60 ~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~ 131 (388)
T PRK07811 60 NPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 131 (388)
T ss_pred CccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe
Confidence 35678999999999832 334555667899999999999999999999999986443322 11357776666
Q ss_pred ccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc
Q 038416 127 DLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF 206 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 206 (387)
+. .|++++++++++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+..... .++. .
T Consensus 132 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~-~ 196 (388)
T PRK07811 132 DL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPLA-L 196 (388)
T ss_pred CC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cchh-h
Confidence 53 3789999999889999999999999998844 889999999999999999999864321 1221 2
Q ss_pred CCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhhc-cCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 207 GSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLNA-ASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 207 ~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
.. .+++.|++|.++.+| .+.||+++++ +++.+.++..+.. ....++...+.+...|+. +..+.
T Consensus 197 ga---Divv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-----l~~R~ 261 (388)
T PRK07811 197 GA---DVVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-----LAVRM 261 (388)
T ss_pred CC---cEEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----HHHHH
Confidence 22 389999999987654 5679988864 1455655544432 334444443333333332 66777
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc
Q 038416 285 GLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP 348 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 348 (387)
++..++++.+.+.|++.|.+..+.+|. .|.++.+.+... ......+++.+ +=..+...-
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l-~~~~~~~s~ 336 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG----EEAARDFCART-KVFTLAESL 336 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC----HHHHHHHHHhC-CcceeeccC
Confidence 888889999999999887765444442 244556666421 01122333332 111111111
Q ss_pred CCcc-------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 349 GRTV-------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 349 g~~~-------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
|+.. +. ++.+|+|++. |+.+.+++.|.+++.
T Consensus 337 G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 387 (388)
T PRK07811 337 GGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLADLEQALG 387 (388)
T ss_pred CCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC--CCHHHHHHHHHHHhh
Confidence 1110 01 3579999998 567777778777764
No 197
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.94 E-value=7.4e-24 Score=198.98 Aligned_cols=350 Identities=15% Similarity=0.102 Sum_probs=218.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+.+..-|......++ .+|.+.+++.+++.+... .+......+ ....+++++....+.+. .+.+++++++++|++.
T Consensus 42 ~~lD~~~g~~~~~lGh-~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGsea~e~ 117 (425)
T PRK08088 42 EYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSEAVEN 117 (425)
T ss_pred EEEEcCCchhhcCCCC-CCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHHHHHH
Confidence 3455545443222222 488899999999886322 122112223 34577777766443221 2478888888898888
Q ss_pred HHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCcee--------------eeeccCC-CCCccC--ChhhHHHhhc---
Q 038416 89 SLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEA--------------RHYDLLP-EKRWEV--DLDGVEALAD--- 146 (387)
Q Consensus 89 ~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~--------------~~~~~~~-~~~~~~--~~~~l~~~~~--- 146 (387)
+++... .....|+...++|++....+. ..+... ..++.+. ..+... +++.+++.++
T Consensus 118 Alklar~~~~r~~iv~~~~~yHG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~ 195 (425)
T PRK08088 118 AVKIARAATKRSGVIAFTGAYHGRTHYTL--ALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDA 195 (425)
T ss_pred HHHHHHHHhCCCeEEEECCccCCccHHHH--HhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhcc
Confidence 887753 223567777999998765544 322211 1111110 111111 1456777764
Q ss_pred -cCceEEEEeCC--CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc
Q 038416 147 -ENTVAIVIINP--GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 147 -~~~~~v~l~~p--~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
++..+.++..| ++++...++++.+++|.++|+++|+++|+||+|.++.+.+... .+... +....+.||||.++
T Consensus 196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~---~~~pdi~s~sK~l~ 271 (425)
T PRK08088 196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQM---GVAADLTTFAKSIA 271 (425)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhc---CCCCCEEEEecccc
Confidence 23344556666 5676678899999999999999999999999999876554321 11112 12344789999975
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcC
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
+|+|+||+++++ ++++.+.... ..+++.+++.+.++..+|+...+ ..+++..+..+++++.+.+.....
T Consensus 272 -~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 342 (425)
T PRK08088 272 -GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKH 342 (425)
T ss_pred -CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 899999999976 6777776543 25667889999999999887543 334444444444444454444445
Q ss_pred CCCCCCCCCCceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHH
Q 038416 302 PCITCPVKPQGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERI 376 (387)
Q Consensus 302 ~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l 376 (387)
|.+..+ . ..|.++|+.+.... .+.......+...+ .++||.+.|+..+ .+.+|++++ .+++++++++++|
T Consensus 343 ~~~~~v-~-g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l 417 (425)
T PRK08088 343 PEIGDV-R-GLGAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEII 417 (425)
T ss_pred CCeEEE-e-ccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence 544322 1 22888999884311 01111234555555 5669988876443 478999996 4799999999999
Q ss_pred HHHHHH
Q 038416 377 KAFCQR 382 (387)
Q Consensus 377 ~~~~~~ 382 (387)
.+++++
T Consensus 418 ~~~l~~ 423 (425)
T PRK08088 418 AQCFDE 423 (425)
T ss_pred HHHHHh
Confidence 999875
No 198
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=6.7e-24 Score=201.33 Aligned_cols=319 Identities=18% Similarity=0.185 Sum_probs=210.2
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCCCCC--CCcHHHHHHHH---HHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-C
Q 038416 22 SLLSDSTVAEDAVVDALRTAHYNCYSPT--LGVPSARRGIA---DYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-R 95 (387)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~lr~~ia---~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~ 95 (387)
+++..|..+.++...... ...|.+. .....+++.++ +++.+.+| .+.+++.+++|++++++.++.++. +
T Consensus 78 ~~~~~p~~~~~~~~~~~~---~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t~~~~~~~~a~~~~ 152 (447)
T PRK00451 78 YDHYIPAVVDHIISRSEF---YTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGATALAEAALMAVRIT 152 (447)
T ss_pred cCCcCcHHHHHHHhchhH---HHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHHHHHHHHHHHHHhc
Confidence 367777777666544321 1124330 11233555555 33355554 456689999999999999988874 7
Q ss_pred CCCeEEEcCCCCcchHHHhhc--cCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAG--SNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
+||+|+++++.|+++...+.. ...|.+++.+++++ + .+|++++++++++++++|++++| |+||.+.+ +++|
T Consensus 153 ~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~---l~~I 225 (447)
T PRK00451 153 KRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIED---LEEI 225 (447)
T ss_pred CCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCC---HHHH
Confidence 899999999999887766540 03688999998753 3 78999999999999999999999 89999965 8999
Q ss_pred HHHHHhcCcEEee--cccccccccCCCCCccccccCCCccEEEEe---cCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 174 ARTARNLGIIVIA--DEVYNHLAFGSTPYVPMGVFGSIVPVITLG---SISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 174 ~~~~~~~~~~li~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
.++|+++|+++++ |.+..++. .....++.+ +++. +++|.+.+.|+++||+++++ ++++
T Consensus 226 ~~~a~~~~~~~iv~~d~~~~g~~------~~~~~~~~D---~~~~s~~k~~~~~~~~Gpg~G~l~~~~--------~~~~ 288 (447)
T PRK00451 226 AEIAHAGGALFIVGVDPVSLGLL------KPPGEYGAD---IVVGEGQPLGIPLSFGGPYLGFFATRK--------KLVR 288 (447)
T ss_pred HHHHHHCCCEEEEEcChHHhccC------CCcccCCCC---EEEECCCcCCCCCCCCCCCchHHHhhH--------HHHh
Confidence 9999999999988 54432111 011222222 5554 67777778888999998865 3444
Q ss_pred HH----------------------------HhhhhccC-CcchHHH-HHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh
Q 038416 249 SI----------------------------KGCLNAAS-HPVTFIQ-AAVPRIVDETNEAFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 249 ~~----------------------------~~~~~~~~-~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (387)
.+ +....... ..+...+ .++...+....+.+++++.+++.++++++.+.|
T Consensus 289 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 368 (447)
T PRK00451 289 QMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERL 368 (447)
T ss_pred hCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 11111111 1111122 233223333345778999999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEE--EecCcccccCCCcHHHHHHHHHHhcCeEE-EcCCccC--CCCeEEEEee--CChHhHHH
Q 038416 299 KEIPCITCPVKPQGAMFVM--VKLNVSMLEDIGDDLEFCLKLAKEESVII-LPGRTVG--MKNWLRIAFA--AEPATLED 371 (387)
Q Consensus 299 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~~--~~~~~Ri~~~--~~~e~~~~ 371 (387)
++++++.+. .+.+|.+ ++++. +..++..+|+++ ||.. .++..+. ..+++|++++ .+++++++
T Consensus 369 ~~~~g~~~~---~~~~~~~~~v~~~~-------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~ 437 (447)
T PRK00451 369 AEIGGVELF---DGPFFNEFVVRLPK-------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDA 437 (447)
T ss_pred hhcCCEEec---CCCeEEEEEEecCC-------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHH
Confidence 998888743 2333433 44431 356787877554 6652 3444433 2478999994 68999999
Q ss_pred HHHHHHHHH
Q 038416 372 GLERIKAFC 380 (387)
Q Consensus 372 ~~~~l~~~~ 380 (387)
+++.|++++
T Consensus 438 l~~~L~~~~ 446 (447)
T PRK00451 438 LVAALGEVL 446 (447)
T ss_pred HHHHHHHHh
Confidence 999998754
No 199
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.93 E-value=7.4e-24 Score=198.41 Aligned_cols=313 Identities=14% Similarity=0.125 Sum_probs=208.7
Q ss_pred CcHHHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC---------
Q 038416 26 DSTVAEDAVVDALRTAHYN-CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~-~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------- 95 (387)
.+|.+.+++++++...... .+.......++.+.++++. ..+.+++++++++|++.+++.+..
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~ 129 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVP 129 (401)
T ss_pred CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCC
Confidence 3788999999998763221 1112223455666666654 235899999999999999999842
Q ss_pred CC-CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 96 PG-ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 96 ~g-~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+| ++|++...+|++....+. ..+. ++..++ ..|++++++++.+++++|++.+|+||+
T Consensus 130 ~~~~~vi~~~~~~HG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~~~aii~e~~~~~~ 200 (401)
T PRK00854 130 EGQAEIIVCADNFHGRTLSIV--GFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITPNTVAFLVEPIQGEA 200 (401)
T ss_pred CCCceEEEECCCcCCccHHHH--hccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCCCeEEEEEccccCCC
Confidence 23 678888888877543333 2211 111121 137899999998889999999999999
Q ss_pred cccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 162 GNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 162 G~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
|..++ .+++++|.++|++||+++|+||+|.++.+.+..... .....++ +++ ++|+++...+|+|++++++
T Consensus 201 G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D---~~~--~~K~l~gg~~~ig~v~~~~--- 272 (401)
T PRK00854 201 GVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD---VTL--IGKALSGGFYPVSAVLSNS--- 272 (401)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCC---EEE--ecccccCCccCeEEEEEcH---
Confidence 99887 456999999999999999999999977655432111 1111222 222 4699765447999999976
Q ss_pred cccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEE
Q 038416 240 ILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK-PQGAMFVM 317 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~g~~~~ 317 (387)
++.+.+.... ..+++.+++.++++.+.|+...+ ....+.++++.+++.+.|+++. ...+.. ...|.++.
T Consensus 273 -----~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~ 343 (401)
T PRK00854 273 -----EVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLA 343 (401)
T ss_pred -----HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEE
Confidence 6777665432 23456788888888888865322 2355777778888888888763 221111 22244444
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~ 381 (387)
+.+.... .+..++...++ ++||.+.+.. .+++|+++ ..+++++++++++|++++.
T Consensus 344 i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 344 VELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 4442210 13456777765 4699987632 47999998 4689999999999988764
No 200
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.5e-23 Score=191.96 Aligned_cols=223 Identities=16% Similarity=0.108 Sum_probs=163.9
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeec
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYD 127 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~ 127 (387)
.....+|++.+++++ ..+++++++|+++|+..++.+++++||+|+++.|.|.++...+. ....|.++..+.
T Consensus 52 np~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 52 NPTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred CccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 356789999999998 34578888999999999999999999999999999998766553 014576665542
Q ss_pred cCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc
Q 038416 128 LLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF 206 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 206 (387)
.+++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+... ...++ ..
T Consensus 124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~l-~~ 187 (385)
T PRK08574 124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPL----LYRPL-RH 187 (385)
T ss_pred --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc----cCChh-hh
Confidence 367899999987 8999999999999999988 6788999999999999999997422 11122 12
Q ss_pred CCCccEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 207 GSIVPVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 207 ~~~~~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
+..+++.|++|.++.+|-. .|++++.+ .++.++++..+. .+...+++..+.+...++. +..+.
T Consensus 188 ---GaDivv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L~~R~ 252 (385)
T PRK08574 188 ---GADFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----LEVRF 252 (385)
T ss_pred ---CCcEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----HHHHH
Confidence 2248999999998766654 46566643 256676665544 3445555544444443433 66777
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 285 GLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
++..+++..+.+.|++.|.+..+.+|
T Consensus 253 ~~~~~na~~la~~L~~~p~v~~V~yP 278 (385)
T PRK08574 253 ERQCRNAMAIAEFLSEHPKVAEVYYP 278 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCcCEEECC
Confidence 88888899999999887766544443
No 201
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=2.8e-23 Score=187.29 Aligned_cols=318 Identities=19% Similarity=0.126 Sum_probs=233.4
Q ss_pred CCCCCCCcHHHHHHHHHHhcCC-C-----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTA-H-----YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~-~-----~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.+.+++.++++.- . ..-++...-+.+|++.+|+|+ ..+..++.+++-.|+..++.+|
T Consensus 48 dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~SGy~AN~~~i~~l 119 (388)
T COG0156 48 DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFSSGFVANLGLLSAL 119 (388)
T ss_pred CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEcccchhHHHHHHHh
Confidence 3457889999999999999862 1 112333445788999999999 4567777777888999999999
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---C---ceEEEEeCCCCCccccCCH
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---N---TVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~---~~~v~l~~p~nptG~~~~~ 167 (387)
++++|.|+...-.|-+..+..+ ..+.+++.+.. -|++.||+.+.+ + .+.|+....-+..|.+.|
T Consensus 120 ~~~~dli~~D~lnHASiidG~r--ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp- 189 (388)
T COG0156 120 LKKGDLIFSDELNHASIIDGIR--LSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP- 189 (388)
T ss_pred cCCCcEEEEechhhhhHHHHHH--hCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC-
Confidence 9999999999999999999999 99999988864 277888888755 2 355555566778999977
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc--cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV--FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
+++|.+++++|+.++++||+|+...++..+...... +...+..+.++|++|+||..| ||+.++. .
T Consensus 190 --L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~--------~ 256 (388)
T COG0156 190 --LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSA--------A 256 (388)
T ss_pred --HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcH--------H
Confidence 889999999999999999999987777554444333 333445799999999999887 9999876 7
Q ss_pred HHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 246 FVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 246 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
+++.++.... ++.+.+|....++...++.. .....+.++++++...++..++.. ++. . .+.....+.+.+..
T Consensus 257 ~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~s~s~I~pv~~gd 331 (388)
T COG0156 257 LIDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKAL-GLV-L-LPSESPIIPVILGD 331 (388)
T ss_pred HHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCCCCCeeeeEeCC
Confidence 8888887632 33445555555566666542 234667788888888888666655 555 2 34445555444432
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
. ....++...++++ ||.+.+...... ...+|++++ .++++|+.+++.+.+.
T Consensus 332 ~-----~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 332 E-----ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred H-----HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 1 1345677777666 999987655443 367999994 5899999999998764
No 202
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=4.9e-23 Score=192.00 Aligned_cols=296 Identities=15% Similarity=0.137 Sum_probs=201.1
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~ 124 (387)
......|++.++++. ..++.++++|++.|+..++..++++||+|+++.+.|++.. ..+. ..|++++
T Consensus 63 ~p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~--~~Gv~v~ 132 (431)
T PRK08248 63 NPTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLP--KLGITVK 132 (431)
T ss_pred CchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHH--hCCEEEE
Confidence 345678889999988 3468889999999999999999999999999999997543 3455 6899988
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.++. .|++++++++++++++|++++|+||||..++ +++|+++|+++|+++|+|++++. +....++
T Consensus 133 ~vd~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl- 197 (431)
T PRK08248 133 FVDP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI- 197 (431)
T ss_pred EECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-
Confidence 8865 2789999999889999999999999999988 67888999999999999999873 1112222
Q ss_pred ccCCCccEEEEecCcccccccccceEEEEeeCCCCcc-c----------chhH---------------HHHHHhh-hhcc
Q 038416 205 VFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL-Q----------NSGF---------------VDSIKGC-LNAA 257 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~-~----------~~~~---------------~~~~~~~-~~~~ 257 (387)
.+ +..+++.|++|.++.+|.++|++++......+ . ++++ ....... ...+
T Consensus 198 ~~---gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 274 (431)
T PRK08248 198 EH---GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLG 274 (431)
T ss_pred Hc---CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcC
Confidence 22 23488999999999999999998875322100 0 0000 0111111 1234
Q ss_pred CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEEec
Q 038416 258 SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-----------------GAMFVMVKL 320 (387)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~g~~~~~~~ 320 (387)
...+++..+.+..-|+. +..+.++.++++..+.+.|++.|.+..+.+|. .|.++.+.+
T Consensus 275 ~~l~p~~a~l~~rgl~t-----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l 349 (431)
T PRK08248 275 AALSPFNSFLLLQGLET-----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGI 349 (431)
T ss_pred CCCCHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEe
Confidence 55566555555444443 77888999999999999999988766554441 134555555
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHH
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
... ......+++.+ +=..+.++-|+.. +. ++.+|+|++. |+.+.+++.|.
T Consensus 350 ~~~----~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--Ed~~dL~~Dl~ 422 (431)
T PRK08248 350 KGG----VEAGKKLIDSV-KLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT--EAIDDILDDLR 422 (431)
T ss_pred cCC----HHHHHHHHHhC-CcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHH
Confidence 321 01122343333 2111111112111 00 3579999999 67888888888
Q ss_pred HHHHHhh
Q 038416 378 AFCQRHA 384 (387)
Q Consensus 378 ~~~~~~~ 384 (387)
++++..+
T Consensus 423 ~Al~~~~ 429 (431)
T PRK08248 423 QAIRQSQ 429 (431)
T ss_pred HHHHhhh
Confidence 8887654
No 203
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.2e-23 Score=194.64 Aligned_cols=295 Identities=17% Similarity=0.144 Sum_probs=201.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSN 118 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~ 118 (387)
+..|+. ....+|++.++++. ..+++++++|+++|+..++.+++++||+|+++.|+|..+.. .+. .
T Consensus 59 Y~r~~~-pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~--~ 127 (394)
T PRK07050 59 YGLHAT-PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLAR--D 127 (394)
T ss_pred cCCCCC-HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHH--h
Confidence 334433 45688888999887 34689999999999999999999999999999999998664 455 6
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
.|+++..++.. +.+++++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|+...+
T Consensus 128 ~Gi~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~--- 194 (394)
T PRK07050 128 FGITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA--- 194 (394)
T ss_pred cCeEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc---
Confidence 78888877531 3467888899999999999999999755 7799999999999999999999975221
Q ss_pred CCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN 276 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 276 (387)
..++. . +..+++.|++|.++ ..+.+.|++++.+ ++++++++..+. .+.+.+++..+.+...++.
T Consensus 195 -~~~l~-~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-- 260 (394)
T PRK07050 195 -FKPFE-H---GVDISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS-- 260 (394)
T ss_pred -cCHHH-c---CCeEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc--
Confidence 11211 1 22488999999975 3456789888754 257777776554 4555666555444433433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 277 EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
+..+.++..+++..+.+.|++.|.+..+.+|. .|..+.+.+.... +..+..++++.+ +
T Consensus 261 ---l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l-~ 334 (394)
T PRK07050 261 ---LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEAL-E 334 (394)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcC-C
Confidence 45577777777778888888876655443332 2333444443100 001233444443 4
Q ss_pred hcCeEEEcCCccC-----------------CCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 341 EESVIILPGRTVG-----------------MKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 341 ~~gi~v~~g~~~~-----------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
..++.++-|+... .++.+|+|++. |+.+.+++.|.+++...
T Consensus 335 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 335 LFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--EDEADLIADLEQALEAA 392 (394)
T ss_pred CCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc--CCHHHHHHHHHHHHHHh
Confidence 4444333222111 12579999998 66777888888887764
No 204
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=3.2e-23 Score=191.79 Aligned_cols=285 Identities=16% Similarity=0.097 Sum_probs=199.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~ 125 (387)
....+|++.++++++ .+..+++++++.|+..++.+++++||+|+++.+.|.+.. ..+. ..|+++..
T Consensus 63 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~--~~G~~v~~ 132 (389)
T PRK05968 63 PTVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILK--RMGVEVDY 132 (389)
T ss_pred hhHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH--HcCceEEE
Confidence 356799999999883 234555667788999999999999999999999998643 4555 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++ +++++|++++|+|+++ +..++++|+++|+++|+++|+|++|+...+.. ++.
T Consensus 133 vd~-------~d~~~l~~~i-~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~~- 196 (389)
T PRK05968 133 VDG-------RDEEAVAKAL-PGAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQR----PIT- 196 (389)
T ss_pred eCC-------CCHHHHHHhc-ccCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccC----chh-
Confidence 753 2789999888 5789999987776665 44889999999999999999999997643221 221
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
... .+++.|++|.++.+| .+.|+++.++ +++++++.... .....+++..+.+...|+. +..
T Consensus 197 ~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-----l~~ 260 (389)
T PRK05968 197 LGV---DLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-----LPL 260 (389)
T ss_pred cCC---cEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-----HHH
Confidence 222 378889999987654 5788888754 67777765432 3345566666655555543 577
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQ-----------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT 351 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 351 (387)
+.++..++++.+.+.|+++|.+..+.+|. .|.++.+.++.. .+..+++..| +..++.++-|..
T Consensus 261 r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~s~G~~ 334 (389)
T PRK05968 261 RMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGVSWGGH 334 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEecCCCCC
Confidence 77777888889999999998876565552 233455555421 1345666655 455555554443
Q ss_pred cC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 352 VG----------------------M-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 352 ~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+. . ++.+|+|++. |+.+.+++.|++++++.+
T Consensus 335 ~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--E~~~dl~~dl~~al~~~~ 388 (389)
T PRK05968 335 ESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL--EGTEALWADLEQALAAAS 388 (389)
T ss_pred CceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHHhh
Confidence 32 1 3589999998 667777888888876543
No 205
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=5.3e-23 Score=190.73 Aligned_cols=318 Identities=13% Similarity=0.106 Sum_probs=218.1
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHHHhhc--CCCCe
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLA--RPGAN 99 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~--~~g~~ 99 (387)
.++.+|.+.+++.+++.... .++. ....++++.+++.+.. .++ .+++++|+++++..+++... ..+++
T Consensus 42 ~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~ 112 (375)
T PRK04260 42 NLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANEAAIKIARKATGKQE 112 (375)
T ss_pred cCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHHHHHHHHHHhcCCCe
Confidence 46668899999999987531 2222 2346788899987732 233 46889999999998888763 34578
Q ss_pred EEEcCCCCcchH-HHhhccCCCceee----eeccCCCC-CccCChhhHHHhhccCceEEEEeCCCCCccccC-CHHHHHH
Q 038416 100 ILIPRPGYPLYE-IHAAGSNNNLEAR----HYDLLPEK-RWEVDLDGVEALADENTVAIVIINPGNPCGNVF-SYQHLQK 172 (387)
Q Consensus 100 vl~~~p~~~~~~-~~~~~~~~g~~~~----~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~-~~~~~~~ 172 (387)
|++.+..|++.. ..+. ..+.+.. ...+.... ....|++.+++.+++++.+|++..++|++|... +.+.+++
T Consensus 113 vv~~~~~yHg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~ 190 (375)
T PRK04260 113 IITFQNSFHGRTFGSMS--ATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKA 190 (375)
T ss_pred EEEECCCcCcccHHHHh--ccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHH
Confidence 999888888643 2322 2221110 00000000 001378899988877777888888899999975 4677999
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
+.++|+++|+++|+||+|.++...+..... ...+.++ +.||||.++ +|+|+||+++++ ++.+.+.
T Consensus 191 ~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd-----i~t~sK~l~-~G~~ig~~~~~~--------~~~~~~~ 256 (375)
T PRK04260 191 LADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD-----IFTLAKGLA-NGVPVGAMLAKS--------SLGGAFG 256 (375)
T ss_pred HHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC-----EEEeccccc-CCcceEEEEEcH--------HHHhhcC
Confidence 999999999999999999987655542221 2223332 448999964 789999999976 6666665
Q ss_pred hhh-hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 252 GCL-NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 252 ~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
... ..++..+++.+.++.++|+... ++.+++..+..+..++.+.+.+.+.+.+.. .+..|.++|+.+..
T Consensus 257 ~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~~~~~~~~------- 327 (375)
T PRK04260 257 YGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTT--VRGLGYMIGIETTA------- 327 (375)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeE--EeccceEEEEEecC-------
Confidence 432 2456678888998888887643 345566666777777777777766643331 23478899988743
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
+..++...+ .++||.+.|+. .+.+|+++. .+++++++++++|+++
T Consensus 328 ~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 328 DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 345666655 56799998753 478999993 5799999999999765
No 206
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=1.2e-23 Score=186.73 Aligned_cols=336 Identities=16% Similarity=0.127 Sum_probs=213.0
Q ss_pred CCCcHHHHHHHHHHhcC----CCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CC
Q 038416 24 LSDSTVAEDAVVDALRT----AHYNCYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RP 96 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~----~~~~~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~ 96 (387)
-|.++.|+++|++.... .+...|+.. ...++.|+.+|+++ +.++++|++|+|+|++++++++... ..
T Consensus 53 ~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts~ATEs~Nlvl~~v~~~~ 126 (428)
T KOG1549|consen 53 GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTSGATESNNLVLKGVARFF 126 (428)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeCCchHHHHHHHHHhhccc
Confidence 46899999999998775 222224442 23688899999999 4588889999999999999999974 33
Q ss_pred CC----eEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 97 GA----NILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 97 g~----~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
+| +|++.+-.|.+.....+ .-..|+++.++|+. +.+.+|.+.++++++++|+++.+.+.+|-+|+.+| ++
T Consensus 127 ~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P---v~ 201 (428)
T KOG1549|consen 127 GDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP---VK 201 (428)
T ss_pred cccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEEEecccCcccccc---HH
Confidence 45 89988888876543333 11688999999986 44578999999999999999999999999999999 89
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC-CCCcccchhHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD-PNGILQNSGFVDSI 250 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~-~~~~~~~~~~~~~~ 250 (387)
+|.++|+++++.+++|.+++- |+-...+..++.+ +...|.+|+||.+| +|++++++ ...+...|.+....
T Consensus 202 EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYvr~~~~~~~~~p~~~GGg 272 (428)
T KOG1549|consen 202 EIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYVRRKRPRLRVEPPLSGGG 272 (428)
T ss_pred HHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEEccCCCcccccCcccCCc
Confidence 999999999999999999996 5555566667665 77889999999999 89999985 22111112221111
Q ss_pred HhhhhccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCCc--eEEEEEecCcccc
Q 038416 251 KGCLNAASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYERIK-EIPCITCPVKPQG--AMFVMVKLNVSML 325 (387)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~--g~~~~~~~~~~~~ 325 (387)
....-..++..++.+..+..+.+... ..+...+..+ ..+.+...+. .++.+.....+.. ...+.+.++. .
T Consensus 273 q~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~--~ 347 (428)
T KOG1549|consen 273 QERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPY--V 347 (428)
T ss_pred cccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeeccc--c
Confidence 11111234555556666555554321 1222222222 3333333332 2333322211111 1112222330 0
Q ss_pred cCCCcHHHHHHHHHHhcCeEEE-----c-------CC-ccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIIL-----P-------GR-TVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~-----~-------g~-~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..-..+.....+.. |.... | |. .+.....+||+++ ++++|++.+.+.+++.+..++.
T Consensus 348 ~g~~~~~~~~~~~l~s-~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 348 EGESLLMDLKDVALSS-GSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred cCcchhhhhhhhhhcc-cchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 0100001111111111 11110 1 01 1112578999995 5899999999999999887765
No 207
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.93 E-value=3.1e-23 Score=194.29 Aligned_cols=326 Identities=15% Similarity=0.138 Sum_probs=206.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----------
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR---------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~---------- 95 (387)
.+|.+.+++.+++..... .+.. -..+..+.+.+.+.+.. ..+.++++++|++|++.+++.+.+
T Consensus 48 ~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~----~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~ 120 (400)
T PTZ00125 48 CHPKILAALINQAQKLTL--TSRA-FYNDVLGLAEKYITDLF----GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPE 120 (400)
T ss_pred CCHHHHHHHHHHHHhccc--cccc-ccCHHHHHHHHHHHhCC----CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCC
Confidence 578899999998864321 1111 11223344444443322 236889999999999999997741
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceee---eeccCCC--CCccCChhhHHHhhc-cCceEEEEeCCCCCccccCC-HH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEAR---HYDLLPE--KRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFS-YQ 168 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~---~~~~~~~--~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~-~~ 168 (387)
.+++|++.+.+|++...... +..+.... ..+..+. .-...|+++++++++ +++++|++..++||+|..++ .+
T Consensus 121 ~~~~vl~~~~~~Hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~ 199 (400)
T PTZ00125 121 NQAKIIFCNGNFSGRTIGAC-SASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDG 199 (400)
T ss_pred CCCeEEEECCCcCCccHHHH-hhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHH
Confidence 34789988888887543333 01121110 0011000 000127899999886 56788888778999999886 45
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
.+++|.++|++||+++|+||+|.++.+.|..+.. .....++ +.+++|.++.+++|+||+++++ +++
T Consensus 200 ~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd-----~~~~sK~l~~g~~~ig~v~~~~--------~~~ 266 (400)
T PTZ00125 200 YLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD-----IVLLGKALSGGLYPISAVLAND--------DVM 266 (400)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC-----EEEEcccccCCCcCcEEEEEcH--------HHH
Confidence 6999999999999999999999887665542211 1122222 2347899865556999999976 677
Q ss_pred HHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCCCceEEEEEecCc
Q 038416 248 DSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----PCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~g~~~~~~~~~ 322 (387)
+.+.... ..+++.+++.+.++.+.++...++.+ .++..++.+.+++.|+++ +.+..+ .+ .|.++++.++.
T Consensus 267 ~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~-~g~~~~v~~~~ 341 (400)
T PTZ00125 267 LVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RG-KGLLNAIVFDH 341 (400)
T ss_pred hhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ec-ccEEEEEEEcc
Confidence 7765432 23456778888888776664332222 233334445555555442 222212 23 56677777753
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.. + .+...+...++ ++||.+.|+. .+++||++ ..+++++++++++|.++++++..
T Consensus 342 ~~--~-~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 342 SD--G-VNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLKSFDS 398 (400)
T ss_pred Cc--c-hHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 11 0 13456666664 6699998863 57899997 47899999999999999988754
No 208
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=5.4e-23 Score=190.21 Aligned_cols=294 Identities=14% Similarity=0.162 Sum_probs=196.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~ 125 (387)
+....|++.++++. .....+.++|++.|+.+++.+++++||+|+++.++|.+.... +. ..|+++..
T Consensus 61 Ptv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~--~~Gi~v~~ 130 (432)
T PRK06702 61 PTLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLR--KLGIDVTF 130 (432)
T ss_pred cHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHH--HCCCEEEE
Confidence 45688899999988 335688899999999999999999999999999999876665 56 78999888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .+|+++++++++++|++|++.+|+||++.+++ +++|+++|+++|+++|+|++++.-.. ..++ .
T Consensus 131 vd~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----~~pl-~ 196 (432)
T PRK06702 131 FNP------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----CQAF-E 196 (432)
T ss_pred ECC------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh----CChh-h
Confidence 753 35889999999999999999999999999977 89999999999999999999862110 1111 2
Q ss_pred cCCCccEEEEecCcccc-----cccccce-----EEEEeeCCCCcccc--------------hhHHHHHH--hhhhccCC
Q 038416 206 FGSIVPVITLGSISKRW-----IVPGWRL-----GWLVTSDPNGILQN--------------SGFVDSIK--GCLNAASH 259 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~-----~~~g~r~-----G~i~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~ 259 (387)
... .+++.|+||.. +++|.++ +|...++......+ +++..+.+ ..+..+..
T Consensus 197 ~GA---DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (432)
T PRK06702 197 HGA---NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNC 273 (432)
T ss_pred cCC---CEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCC
Confidence 222 39999999944 4444443 33332211111000 01111111 22234567
Q ss_pred cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEEecCc
Q 038416 260 PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-----------------GAMFVMVKLNV 322 (387)
Q Consensus 260 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~g~~~~~~~~~ 322 (387)
++++..+.+...|+. ++.+.++.++++..+.+.|++.|.+..+.+|. .|-++.+.+..
T Consensus 274 ~sp~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~ 348 (432)
T PRK06702 274 MSPFNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKG 348 (432)
T ss_pred CCHHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC
Confidence 788877777776765 67777888899999999999887665444441 23345555531
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCC----------cc------------CC-CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGR----------TV------------GM-KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~----------~~------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
. ......+++.+ +=..+.++-|+ .- +. ++.+|+|++. |+.+.+++.|.++
T Consensus 349 ~----~~~~~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl--Ed~eDLi~Dl~~A 421 (432)
T PRK06702 349 G----LEAAKEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI--EDVSDIIADLEAA 421 (432)
T ss_pred C----HHHHHHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHH
Confidence 0 01122333332 21112111111 00 00 3579999999 6788888888888
Q ss_pred HHH
Q 038416 380 CQR 382 (387)
Q Consensus 380 ~~~ 382 (387)
+..
T Consensus 422 l~~ 424 (432)
T PRK06702 422 LVG 424 (432)
T ss_pred Hhc
Confidence 865
No 209
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.93 E-value=1.2e-22 Score=192.76 Aligned_cols=337 Identities=12% Similarity=0.063 Sum_probs=221.3
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCC---CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH--HH-hhcC
Q 038416 22 SLLSDSTVAEDAVVDALRTAHYNCY---SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS--LS-VLAR 95 (387)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~y---~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~--~~-~l~~ 95 (387)
+++..+|.+.+++.+......+..| +..+|..+++..+.+++.+.+|. +...+..++|+++.+..+ ++ .+.+
T Consensus 78 ~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~l~~~r~~~~~ 155 (481)
T PRK04366 78 CTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTGLLMIRAYHEA 155 (481)
T ss_pred cCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHHHHHHHHHhhc
Confidence 3778899999999886322334566 34678889999999999887774 333344444444444322 22 3356
Q ss_pred CCC----eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 96 PGA----NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 96 ~g~----~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
+|| +|+++.|+|+.+...+. ..|++++.++++ .++.+|+++|++++++++++|++++|+ |||.. ..+++
T Consensus 156 ~Gd~~~~~Vlv~~~~hp~~~~~~~--~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~~dl~ 228 (481)
T PRK04366 156 RGDTKRTEVIVPDSAHGTNPASAA--MAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF--ERNIL 228 (481)
T ss_pred cCcCCCCEEEEcCCccHhHHHHHH--HcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc--chHHH
Confidence 665 99999999999999999 999999999874 346789999999999899999999998 99965 35699
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccccc----ccceEEEEeeCCCCcccchhHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVP----GWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~----g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+|+++|+++|+++|+|.++..... +. .+...+..+ +++++.+|+|+.| |..+|++.+++ ++.
T Consensus 229 eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~--------~~~ 294 (481)
T PRK04366 229 EIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKE--------ELA 294 (481)
T ss_pred HHHHHHHHcCCEEEEEecChhhhc-cc--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehh--------hhH
Confidence 999999999999999999863211 11 122233333 8889999998643 45578887764 222
Q ss_pred HHHH-----------------hh---hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 248 DSIK-----------------GC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 248 ~~~~-----------------~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
+.+. .. +...++.+.....++...+.....+.+++..++...+++++.+.|+++..+. .
T Consensus 295 ~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~-~ 373 (481)
T PRK04366 295 PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLP-Y 373 (481)
T ss_pred hhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCccc-C
Confidence 2221 00 0011122223344444455555566778888888888999999998862333 1
Q ss_pred CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-CCCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 308 VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-MKNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
..+.. .-+.+.++....++. +..++...| .++||.+....... ..+++|+++ ..++++++.+++.|+++.++..
T Consensus 374 ~~~~~-~~~~~~~~~~~~~g~-~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 374 DRPCM-HEFVLSGKKLKETGV-RTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred CCCee-EEEEEECccccccCC-CHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111 112233321111111 455666666 56698765211111 256899999 4689999999999999887765
Q ss_pred h
Q 038416 385 K 385 (387)
Q Consensus 385 ~ 385 (387)
+
T Consensus 451 ~ 451 (481)
T PRK04366 451 E 451 (481)
T ss_pred h
Confidence 3
No 210
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=2.2e-23 Score=190.67 Aligned_cols=286 Identities=18% Similarity=0.170 Sum_probs=195.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~ 129 (387)
....+|++.++++. ..+++++++|+++|+..++. ++++||+|+++.+.|......+. ...... .+.+
T Consensus 54 p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~--~~~~~~-~~~~- 120 (364)
T PRK07269 54 PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFN--QQEKEG-RFHF- 120 (364)
T ss_pred ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHH--HHHhcC-cEEE-
Confidence 56789999999998 46799999999999999995 56899999999999986655433 211000 0111
Q ss_pred CCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCC
Q 038416 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI 209 (387)
Q Consensus 130 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 209 (387)
.+..|+++++++++++|++|++++|+||+|...+ +++|+++|+++|+++|+|++|....+ . .++. ...
T Consensus 121 ---~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~-~---~pl~-~ga- 188 (364)
T PRK07269 121 ---TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY-Q---RPIE-LGA- 188 (364)
T ss_pred ---EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cchh-hCC-
Confidence 1235889999999999999999999999998865 88999999999999999999764221 1 2221 222
Q ss_pred ccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHH
Q 038416 210 VPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLL 287 (387)
Q Consensus 210 ~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 287 (387)
.+++.|++|.++..| .=.|++++++ +++.++++..+. .+...+++..+.+...|+. +..+.++.
T Consensus 189 --Divv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~r~~~~ 254 (364)
T PRK07269 189 --DIVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSLRMERS 254 (364)
T ss_pred --cEEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHHHHHHH
Confidence 389999999976544 2357777654 256676665443 3455677666666555654 78888889
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHH---------HHhcCeEEEcCCccCC----
Q 038416 288 KETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKL---------AKEESVIILPGRTVGM---- 354 (387)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~~---- 354 (387)
++++..+.+.|++.|.+..+.+|..|-.+.+.+... .....++..+ .....+.+.|+..++.
T Consensus 255 ~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~ 329 (364)
T PRK07269 255 TANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPA 329 (364)
T ss_pred HHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCH
Confidence 999999999999998776565555444444444210 0122233222 1112334445432211
Q ss_pred ---------CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 355 ---------KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 355 ---------~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
++.+|+|++. |+.+.+++.|.++++
T Consensus 330 ~~r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 330 EVRHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred HHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 3579999999 577888888887764
No 211
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.93 E-value=8.1e-23 Score=190.39 Aligned_cols=340 Identities=15% Similarity=0.142 Sum_probs=213.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC-C-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH-Y-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+.+..-|....+-++ .+|.+.+++++++.+.. . ..++ .....+|.+.++++. ..+.+++++++++|+
T Consensus 36 ~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~la~~L~~~~--------~~~~~~f~~SGseA~ 105 (397)
T TIGR03246 36 EYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYT-NEPVLRLAKKLVDAT--------FADKVFFCNSGAEAN 105 (397)
T ss_pred EEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccC-CHHHHHHHHHHHhhC--------CCCEEEEeCCcHHHH
Confidence 4555544432233355 58999999999987521 1 1111 112234555555443 236999999999999
Q ss_pred HHHHHhhc-------CCC-CeEEEcCCCCcchHHHhhccCCCceeee---eccCCCC-C-ccCChhhHHHhhccCceEEE
Q 038416 87 EISLSVLA-------RPG-ANILIPRPGYPLYEIHAAGSNNNLEARH---YDLLPEK-R-WEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 87 ~~~~~~l~-------~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~-~-~~~~~~~l~~~~~~~~~~v~ 153 (387)
+.+++... ++| ++|+..+.+|++...... +..+..... -|..+.- . ...|++++++.+.+++.+|+
T Consensus 106 e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi 184 (397)
T TIGR03246 106 EAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTV-SVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVI 184 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEEEE
Confidence 99999862 123 678888888887643332 022211100 0000000 0 01278999998877777777
Q ss_pred EeCCCCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
+..++++.|... +.+.+++|.++|++||+++|+||+|.++...|.... ...++.. ..+.+++|.++ +|+++|++
T Consensus 185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a-~~~~gv~---pDi~t~~K~lg-gG~pigav 259 (397)
T TIGR03246 185 VEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA-YMHYGVT---PDILTSAKALG-GGFPIGAM 259 (397)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh-hhhcCCC---CCEEEeehhhh-CCcceeEE
Confidence 775566777654 789999999999999999999999988866654322 1122211 22347899976 78999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCC-C
Q 038416 233 VTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC-ITCPV-K 309 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~ 309 (387)
++++ ++.+.+.... ..+++.+++.+.++.+.|+...+ .+..++++++.+++.+.|+++.. ..++. .
T Consensus 260 ~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~v 328 (397)
T TIGR03246 260 LTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEI 328 (397)
T ss_pred EEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEee
Confidence 9976 6777665432 23456788888888777765322 34566777777777777776421 11110 1
Q ss_pred CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+..|.++.+.+.... ......+...+ .++|+.+.+.. .+++|+++ ..+++++++++++|.++++++
T Consensus 329 rg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 329 RGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred ecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 223445455443210 01234566655 56699987632 47899976 568999999999999988753
No 212
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=6.3e-23 Score=181.31 Aligned_cols=341 Identities=14% Similarity=0.149 Sum_probs=221.4
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTA-HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.|+|+.-|.- .. .++ .+|.+.++++++.+.- +.++.. +++.+..+++.+.+.. + ..+.|++++|+++|+
T Consensus 43 ~YlDf~~Gia-v~-~lGH~hP~iv~al~~Q~~kl~h~sn~~----~~~~~~~la~~L~~~s--~-~~d~vff~NSGaEA~ 113 (404)
T COG4992 43 EYLDFAAGIA-VN-NLGHCHPALVEALKEQAEKLWHVSNLF----YNEPQAELAEKLVELS--P-FADRVFFCNSGAEAN 113 (404)
T ss_pred Eeeeecccee-ee-ccCCCCHHHHHHHHHHHHHhhhccccc----CChHHHHHHHHHHhhC--c-cccEEEEcCCcHHHH
Confidence 4555544432 11 234 7899999999988762 111111 1234455555554422 2 378999999999999
Q ss_pred HHHHHhhcC----C-CCeEEEcCCCCcchHHHhhccCCCceeeee----ccCCCCCc--cCChhhHHHhhccCceEEEEe
Q 038416 87 EISLSVLAR----P-GANILIPRPGYPLYEIHAAGSNNNLEARHY----DLLPEKRW--EVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 87 ~~~~~~l~~----~-g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~--~~~~~~l~~~~~~~~~~v~l~ 155 (387)
+.++....+ + ..+|+.....|++-..... ..+.+..+. |+.+.-.+ -=|+++++++++++|.+|++.
T Consensus 114 EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~gal--S~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvivE 191 (404)
T COG4992 114 EAALKLARKYTGDPEKSKIIAFENSFHGRTLGAL--SATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVIVE 191 (404)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcCCccceee--eccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEEEe
Confidence 999998642 2 2488888888886332222 222222111 22111000 017899999999999888888
Q ss_pred CCCCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 156 NPGNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 156 ~p~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
.-+...|+.+ +++.++++.++|++||+++|.||++.++...|+-+..- .+.- ...|.++.|.+ ..|+++|.+++
T Consensus 192 PIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e-~~gV---~PDI~tlaK~L-gGG~PigA~la 266 (404)
T COG4992 192 PIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYE-HYGV---EPDILTLAKAL-GGGFPIGAMLA 266 (404)
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHH-HhCC---CCCEEEeeccc-cCCccceeeEE
Confidence 7799999975 55559999999999999999999999998887644321 1111 12244778995 56699999999
Q ss_pred eCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 235 SDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAF-FAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
.+ .+.+.+..-.+ .+++.+++++++..+.|+...++. +++..+.-...++.+.+...++|-+. ....-
T Consensus 267 ~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~--~vRG~ 336 (404)
T COG4992 267 TE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVK--EVRGR 336 (404)
T ss_pred ch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCcee--eeecc
Confidence 64 34444443332 578899999999988888654333 33333333334444443333444222 23455
Q ss_pred eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
|.++-+.+.... ...+++..+ ++.|+++.+.. ++.+|+.+. .+++++++++++|+++++....
T Consensus 337 GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 337 GLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred eeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 777777776421 245666655 67799998764 579999994 5899999999999999987654
No 213
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=7.2e-23 Score=188.74 Aligned_cols=290 Identities=15% Similarity=0.129 Sum_probs=200.1
Q ss_pred CCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccC
Q 038416 45 CYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSN 118 (387)
Q Consensus 45 ~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~ 118 (387)
.|... ....+|++.++++++ .++++++++++.++..++. ++++||+|+++.+.|.++.. .+. .
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~g--------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~--~ 108 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLDK--------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVP--R 108 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHH--H
Confidence 45542 235677777777762 2567777778889998776 77999999999999987654 345 6
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
.|.++..++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|+++....
T Consensus 109 ~G~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~---- 174 (378)
T TIGR01329 109 SGVVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL---- 174 (378)
T ss_pred cCcEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----
Confidence 7999888875 2789999999999999999999999999976 8999999999999999999985321
Q ss_pred CCccccccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN 276 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 276 (387)
...++ .... .+++.|.+|.++. .+...|++++++ +++.++++..+. .+...++...+.+...+
T Consensus 175 ~~~~l-~~g~---Di~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l---- 239 (378)
T TIGR01329 175 LCNPL-ELGA---DIVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLLLRGI---- 239 (378)
T ss_pred cCChh-hcCC---cEEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHHHccC----
Confidence 12223 1222 3889999998754 347789998854 145566665544 33444554443333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 277 EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
..+..+.++...++..+.+.|++.|.+..+.+|. .|..+.+.+.. .....+++..| +
T Consensus 240 -~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-----~~~~~~~~~~L-~ 312 (378)
T TIGR01329 240 -KTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-----VALSKRLVEAT-K 312 (378)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHHhC-c
Confidence 3377788888888888888888776543333321 23344555521 11244666665 6
Q ss_pred hcCeEEEcCCccCC-----------------------CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 341 EESVIILPGRTVGM-----------------------KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 341 ~~gi~v~~g~~~~~-----------------------~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
..++.++-|+.... ++.+|+|++. |+.+.+++.|.+++++.
T Consensus 313 ~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 313 LFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFVTA 376 (378)
T ss_pred CcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhc
Confidence 66777766654210 3579999998 67888888888888753
No 214
>PLN00144 acetylornithine transaminase
Probab=99.92 E-value=9.7e-23 Score=188.32 Aligned_cols=323 Identities=14% Similarity=0.120 Sum_probs=208.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---CC------
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA---RP------ 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~------ 96 (387)
.+|.+.+++++++.... .++. ....+....+++.+.+.. ..+.+++++++++|++.+++... +.
T Consensus 32 ~~p~v~~ai~~q~~~~~--~~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~ 104 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLA--HVSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKK 104 (382)
T ss_pred CCHHHHHHHHHHHHhcC--Cccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCc
Confidence 57899999999987532 1221 112344555666654422 24689999999999999998753 10
Q ss_pred ------CCeEEEcCCCCcchHHHhhccCCCceee---eeccCCCCC--ccCChhhHHHhhccCceEEEEeCC-CCCcccc
Q 038416 97 ------GANILIPRPGYPLYEIHAAGSNNNLEAR---HYDLLPEKR--WEVDLDGVEALADENTVAIVIINP-GNPCGNV 164 (387)
Q Consensus 97 ------g~~vl~~~p~~~~~~~~~~~~~~g~~~~---~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p-~nptG~~ 164 (387)
..+|+....+|++....+. +..+.... ..+..+..- ..-|++.+++.+.++....++..| +||+|+.
T Consensus 105 ~~~~~~r~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~ 183 (382)
T PLN00144 105 DPAASSATEFVSFSNSFHGRTLGAL-ALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIY 183 (382)
T ss_pred cccccccceEEEECCCcccccHHHH-hcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCc
Confidence 2578999999988654444 01221100 011111000 011688888888654444444555 7886654
Q ss_pred C-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 165 F-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 165 ~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
. +.+.+++|.++|++||+++|+||++.++...+..+.. ...+.++ +.+++|.+ .+|+|+|++++++
T Consensus 184 ~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l-~~G~pig~v~~~~------ 251 (382)
T PLN00144 184 PATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL-AGGLPIGAVLVTE------ 251 (382)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc-cCCcceEEEEEcH------
Confidence 3 4555999999999999999999999998776653321 3344443 67899996 5789999999976
Q ss_pred chhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEec
Q 038416 243 NSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGL-LKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 320 (387)
++.+.+.... ..++..+++.++++.+.|+...+..+.+..+. -...++.+.+.+++.|.+..+ ...|.++|+.+
T Consensus 252 --~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~v--rg~G~~~~l~l 327 (382)
T PLN00144 252 --KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEV--RGVGLLVGIQL 327 (382)
T ss_pred --HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceee--ecCceEEEEEe
Confidence 6777665332 34667888888888866654333223222222 222344444555555544323 23789999988
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.. +...+...+ .++||.+.|+.. .+.+|++++ .+++++++++++|.++++++
T Consensus 328 ~~-------~~~~~~~~~-~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 328 DV-------PAGPLVDAC-RDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred cC-------ccHHHHHHH-HHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 42 234555554 677999998732 489999994 57899999999999998764
No 215
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.92 E-value=2e-22 Score=188.31 Aligned_cols=159 Identities=23% Similarity=0.190 Sum_probs=130.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcch----HHHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY----EIHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~----~~~~~~~~~g~~~~~ 125 (387)
....+|++.++++++ .+..+++++++.|+..++.+++++||+|+++.+.|++. ...+. ..|.++..
T Consensus 57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~--~~G~~v~~ 126 (418)
T TIGR01326 57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLK--RLGIEVRF 126 (418)
T ss_pred hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHH--HcCcEEEE
Confidence 456889999999882 35788999999999999999999999999999999754 34456 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.. |++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+... ...++
T Consensus 127 v~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~----~~~~l-- 190 (418)
T TIGR01326 127 VDPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPY----LCRPI-- 190 (418)
T ss_pred ECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhh----cCCch--
Confidence 7641 789999999889999999999999999976 7888999999999999999997421 11121
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
..+..+++.|++|.++.+|.|+|+++++.
T Consensus 191 --~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 191 --DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred --hcCCeEEEECccccccCCccceEEEEEec
Confidence 11346999999999999999999999864
No 216
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=2.4e-22 Score=187.27 Aligned_cols=297 Identities=18% Similarity=0.169 Sum_probs=196.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeec
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYD 127 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~ 127 (387)
....+|++.++++.+ .+..++++++++|+..++.+++++||+|+++.+.|++....+. ....|.++..++
T Consensus 58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 456789999999872 3467788888999999999999999999999999986554443 012455655554
Q ss_pred cCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 128 LLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
. .|++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+.... ..++ ...
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~g 194 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPF-EHG 194 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChh-hcC
Confidence 2 3889999999989999999999999999987 78889999999999999999984221 1122 122
Q ss_pred CCccEEEEecCcccccccccceEEEEeeCCCC-ccc-----------ch--------------hHHHHHH-h-hhhccCC
Q 038416 208 SIVPVITLGSISKRWIVPGWRLGWLVTSDPNG-ILQ-----------NS--------------GFVDSIK-G-CLNAASH 259 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~-~~~-----------~~--------------~~~~~~~-~-~~~~~~~ 259 (387)
. .+++.|++|.++.+|.++|.+++.+... ... +| ......+ . ....+..
T Consensus 195 a---Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~ 271 (425)
T PRK06084 195 A---DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAA 271 (425)
T ss_pred C---CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCC
Confidence 2 3899999999998898889887753210 000 00 0000001 0 1123455
Q ss_pred cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------C-ceEEEEEecCc
Q 038416 260 PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP----------------Q-GAMFVMVKLNV 322 (387)
Q Consensus 260 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~-~g~~~~~~~~~ 322 (387)
.+++..+.+..-|+. +..+.++..+++..+.+.|++.|.+..+.+| . .|.++.+.+..
T Consensus 272 l~~~~a~l~lrgl~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 272 LSPFNAFLILQGLET-----LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG 346 (425)
T ss_pred CCHHHHHHHHcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC
Confidence 566655555444444 7888889999999999999998876645444 1 24455555532
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
. ......+++.| +=..+.++-|+... . ++.+|+|++. |+.+.+++.|.++
T Consensus 347 ~----~~~~~~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl--Ed~~dLi~dl~~A 419 (425)
T PRK06084 347 G----QAAGARFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI--EHIDDIIADLAQA 419 (425)
T ss_pred C----HHHHHHHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHH
Confidence 1 00122343333 21121111111110 0 3579999999 6788888888888
Q ss_pred HHHhh
Q 038416 380 CQRHA 384 (387)
Q Consensus 380 ~~~~~ 384 (387)
+...+
T Consensus 420 l~~~~ 424 (425)
T PRK06084 420 LDASK 424 (425)
T ss_pred HHhhh
Confidence 87654
No 217
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=1.7e-22 Score=185.58 Aligned_cols=291 Identities=15% Similarity=0.134 Sum_probs=198.0
Q ss_pred CCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccC
Q 038416 45 CYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSN 118 (387)
Q Consensus 45 ~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~ 118 (387)
.|+. .+....|++.+|++. ..+++++++|+++|+..++.+++++||+|++++|.|+++... .. .
T Consensus 43 ~Y~r~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~--~ 112 (377)
T TIGR01324 43 TYGRRGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLK--R 112 (377)
T ss_pred cccCCCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHH--h
Confidence 4554 234479999999988 346899999999999999999999999999999999876543 34 5
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
.|+++..++. . +.+.+++++++++++|++.+|+||+|.. .++++|+++|+++|+++|+|++|+....
T Consensus 113 ~gi~v~~~d~--~-----~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~--- 179 (377)
T TIGR01324 113 MGVDITYYDP--L-----IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLL--- 179 (377)
T ss_pred cCcEEEEECC--C-----CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc---
Confidence 6777766642 1 2378899999999999999999999888 5699999999999999999999985321
Q ss_pred CCccccccCCCccEEEEecCccccccc-ccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWIVP-GWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN 276 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~~~-g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 276 (387)
..++ .+ +..++++|++|.++.+ +.-.|+++.++ +.++.++... ..+...++...+.+...++
T Consensus 180 -~~pl-~~---gaDivv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~--- 243 (377)
T TIGR01324 180 -FKPL-EH---GVDISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGLR--- 243 (377)
T ss_pred -cCcc-cc---CceEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhhh---
Confidence 1122 12 2348999999998643 46778887754 4555555432 2344555654444444343
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 277 EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
.+.-+.++..+++..+.+.|++.|.+..+.+|. .|.++.+.+.... ......+++.+ +
T Consensus 244 --tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~ 317 (377)
T TIGR01324 244 --TLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-Q 317 (377)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-C
Confidence 366678888888888889998877665454442 2344555553200 01223444443 3
Q ss_pred hcCeEEEcCCccC-------------------CCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 341 EESVIILPGRTVG-------------------MKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 341 ~~gi~v~~g~~~~-------------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
-.++.++-|+... .++.+|+|++. |+.+.+++.|.++++.
T Consensus 318 ~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl--E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 318 LFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL--ENVDDLKADLKAGFEA 376 (377)
T ss_pred cceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC--CCHHHHHHHHHHHHhc
Confidence 3333332222100 12579999998 5677778888777753
No 218
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=3.6e-22 Score=184.92 Aligned_cols=283 Identities=16% Similarity=0.135 Sum_probs=189.4
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~ 125 (387)
....+|++.++++++ .+ .. +++++|+.++..++. ++++||+|+++.|.|++.. ..+. ..|.++..
T Consensus 54 p~~~~le~~lA~l~g------~~-~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~--~~G~~v~~ 122 (390)
T PRK08064 54 PTREALEDIIAELEG------GT-KG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLS--RFGIEHTF 122 (390)
T ss_pred hhHHHHHHHHHHHhC------CC-Ce-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHH--HcCCEEEE
Confidence 456788999999883 23 34 455666778988886 6789999999999998533 4455 68999888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.. |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ .
T Consensus 123 v~~~-------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~ 187 (390)
T PRK08064 123 VDMT-------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-D 187 (390)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-h
Confidence 8752 689999999889999999999999999976 788888899999999999998753211 122 2
Q ss_pred cCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+. ..+++.|++|.++ .+|.-.|++++++ ++++++++.... .+...++...+.+..-+ ..+..+
T Consensus 188 ~g---~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl-----~tl~~R 252 (390)
T PRK08064 188 LG---ADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGL-----KTLHVR 252 (390)
T ss_pred hC---CcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----CcHHHH
Confidence 22 2488999999975 3445568777653 257777776654 23333333333322222 336778
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCe---
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESV--- 344 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi--- 344 (387)
.++..+++..+.+.|++.|.+..+.+|. .|..+.+.+. + .+.+..++.+.++
T Consensus 253 ~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~-~~~~~~f~~~l~l~~~ 323 (390)
T PRK08064 253 LEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------S-EEAVRQFVSHVKLPVF 323 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------C-HHHHHHHHHhCCcceE
Confidence 8888888888888888876544333331 2334454553 1 2233445555565
Q ss_pred EEEcCC------------ccC----------C-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 345 IILPGR------------TVG----------M-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 345 ~v~~g~------------~~~----------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++-|. ++. . ++.+|+|++. |+.+.+++.|.+++++.+
T Consensus 324 ~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl--e~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 324 AVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL--ENVDDLIADFEQALSYVE 384 (390)
T ss_pred cccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhcc
Confidence 333331 111 1 3579999998 466666777777776654
No 219
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=6.3e-22 Score=181.26 Aligned_cols=283 Identities=14% Similarity=0.105 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeeeeccC
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARHYDLL 129 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~~~~~ 129 (387)
.|++.++.+. ..+..++++++++|+..++.+++++||+|+++.|.|+++.. .++ ..|.++..++..
T Consensus 68 ~Le~~la~le--------~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~--~~Gi~v~~vd~~ 137 (395)
T PRK05967 68 ALCKAIDALE--------GSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLK--RLGVEVEYYDPE 137 (395)
T ss_pred HHHHHHHHHh--------CCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHH--hcCeEEEEeCCC
Confidence 4566665543 12345566668999999999999999999999999998765 346 788888877531
Q ss_pred CCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCC
Q 038416 130 PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI 209 (387)
Q Consensus 130 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 209 (387)
+.+.++++++++|++|++.+|+||++.. .++++|+++|+++|+++|+|++|+...+ ..++. +..
T Consensus 138 -------~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl~-~Ga- 201 (395)
T PRK05967 138 -------IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPLD-FGV- 201 (395)
T ss_pred -------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChhH-cCC-
Confidence 3477999999999999999999998765 7799999999999999999999985321 12221 223
Q ss_pred ccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHH
Q 038416 210 VPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLL 287 (387)
Q Consensus 210 ~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 287 (387)
.+++.|.+|.++. ++.-.|+++.++ +.++++.... ..+...+++..+.+..-++. +.-+.++.
T Consensus 202 --Divv~S~tKy~~Gh~d~~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T-----l~lR~~~~ 266 (395)
T PRK05967 202 --DISIHAATKYPSGHSDILLGTVSANE--------KCWPQLLEAHGTLGLCAGPDDTYQILRGLRT-----MGIRLEHH 266 (395)
T ss_pred --CEEEEecccccCCCCCeeEEEEEcCH--------HHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-----HHHHHHHH
Confidence 3999999999643 446677666543 4555555333 24556666665544444443 77788888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE---EEc
Q 038416 288 KETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI---ILP 348 (387)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~ 348 (387)
.+++..+.+.|++.|.+..+.+|. .|..+.+.+.... .++.+.+.+++.+-.+. +.-
T Consensus 267 ~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~----~~~~~~~~~f~~~l~l~~~~~sl 342 (395)
T PRK05967 267 RKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGP----EKGKAKAHAFLDALEIFGLGYSW 342 (395)
T ss_pred HHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCC----cccHHHHHHHHHhCCcceEccCC
Confidence 999999999999988776555553 2345555564210 00122223333322221 111
Q ss_pred CCcc----------------C-CCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 349 GRTV----------------G-MKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 349 g~~~----------------~-~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
|+.. + .++.+|||++. |+.+.+++.|.++++..
T Consensus 343 G~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl--Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 343 GGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL--EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCcceeeeeCCCChhHhhhccCCCCeEEEEecc--CCHHHHHHHHHHHHHhh
Confidence 1111 0 02479999998 56777788888877654
No 220
>PRK05939 hypothetical protein; Provisional
Probab=99.92 E-value=7.5e-22 Score=182.52 Aligned_cols=288 Identities=15% Similarity=0.095 Sum_probs=193.7
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH---HHhhccCCCceeeeec
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEARHYD 127 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~---~~~~~~~~g~~~~~~~ 127 (387)
....|++.++++.+ .+..+++++++.|+..++.+++++||+|+++.+.|+++. ..+. ..|+++..++
T Consensus 48 ~~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~--~~G~~v~~v~ 117 (397)
T PRK05939 48 TTAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLR--GLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHH--hcCCEEEEEC
Confidence 34589999999872 344566666799999999999999999999999997643 3455 6898888886
Q ss_pred cCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 128 LLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
. .|++++++++++++++|++++|+||||.+ .++++|+++|+++|+++|+|++++... ...+. .+
T Consensus 118 ~-------~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~~~~-~~- 181 (397)
T PRK05939 118 A-------TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LFRPK-DV- 181 (397)
T ss_pred C-------CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----ccCcc-cc-
Confidence 5 27899999999999999999999999998 559999999999999999999986421 11111 11
Q ss_pred CCccEEEEecCcccccccccceEEEEeeCCCC-cccc-------------hhHHHHHHhh--hhccCCcchHHHHHHHHH
Q 038416 208 SIVPVITLGSISKRWIVPGWRLGWLVTSDPNG-ILQN-------------SGFVDSIKGC--LNAASHPVTFIQAAVPRI 271 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~-~~~~-------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 271 (387)
+..+++.|++|.++..|.++|+++..+... ..+. ...+..++.. .......++...+.+..-
T Consensus 182 --gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 259 (397)
T PRK05939 182 --GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIG 259 (397)
T ss_pred --CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 345899999999999999999988753210 0000 0001122221 123445555555544444
Q ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHH
Q 038416 272 VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFC 335 (387)
Q Consensus 272 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~ 335 (387)
++. +.-+.++..+++..+.+.|++.|.+..+.+|. .|.++.+.+... .+...++
T Consensus 260 l~t-----l~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~-----~~~~~f~ 329 (397)
T PRK05939 260 AET-----LALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG-----IDCFDFL 329 (397)
T ss_pred cCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-----HHHHHHH
Confidence 443 67778888889999999999887665454543 344555555421 0122333
Q ss_pred HHHHHhcCeE---EEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 336 LKLAKEESVI---ILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 336 ~~ll~~~gi~---v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
..+ .+. ..-|+.. +. ++.+|+|++. |+.+.+++.|.+++++
T Consensus 330 ~~l----~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl--Ed~~dLi~dl~~Al~~ 396 (397)
T PRK05939 330 NRL----KLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI--EDEADLIADFEQALDA 396 (397)
T ss_pred HhC----CcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHhc
Confidence 332 221 1111110 00 2579999999 5788888888888764
No 221
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.92 E-value=4.6e-22 Score=186.46 Aligned_cols=349 Identities=16% Similarity=0.094 Sum_probs=207.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++..-|.-....++ .+|.+.+|+++++.......+.. ...+.+..+++.+.+..+ ....+.+++++++++|++.
T Consensus 34 ~ylD~~~g~~~~~lGh-~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA~e~ 109 (420)
T TIGR00700 34 RLIDFASGIAVLNIGH-SHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEAVEN 109 (420)
T ss_pred EEEECccCHHhccCCC-CCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHHHHH
Confidence 4555544432222223 47889999999987642212211 112333444444443221 1123689999999999999
Q ss_pred HHHhhc--CCCCeEEEcCCCCcchHHHhhccCC-C--------c-----eeeeeccCCCCC---------ccCChhhHHH
Q 038416 89 SLSVLA--RPGANILIPRPGYPLYEIHAAGSNN-N--------L-----EARHYDLLPEKR---------WEVDLDGVEA 143 (387)
Q Consensus 89 ~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~-g--------~-----~~~~~~~~~~~~---------~~~~~~~l~~ 143 (387)
+++... ....+|+....+|++....+. .. + . ++..++.+.... +.-+++.+++
T Consensus 110 AlklAr~~tgr~~ii~~~~~yHG~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
T TIGR00700 110 AVKIARSYTGRPGVVAFDHGFHGRTNMTM--ALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARA 187 (420)
T ss_pred HHHHHHHhcCCCcEEEECCCcCCCcHHHH--HhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHH
Confidence 998753 223678888999988654433 11 1 1 112222210000 0002445666
Q ss_pred hhc----cCceEEEEeCC-CCCccccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEec
Q 038416 144 LAD----ENTVAIVIINP-GNPCGNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGS 217 (387)
Q Consensus 144 ~~~----~~~~~v~l~~p-~nptG~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s 217 (387)
.+. ++..+.++..| +..+|..++ .+.+++|.++|++||+++|+||+|.++.+.+.. ..+..+.. ...+.+
T Consensus 188 ~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~---~pDi~~ 263 (420)
T TIGR00700 188 IFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGP---EPDLIT 263 (420)
T ss_pred HHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCC---CCCEEE
Confidence 542 23445556666 667888665 445999999999999999999999998776642 22222221 122456
Q ss_pred CcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHH-HHHHHHHHHHH
Q 038416 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKII-GLLKETADICY 295 (387)
Q Consensus 218 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 295 (387)
+||.++ +|+|+||+++++ ++.+.+.... ..+++.++++++++.+.++...+..+.++. +.-.+.++.+.
T Consensus 264 lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~ 334 (420)
T TIGR00700 264 TAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLT 334 (420)
T ss_pred eecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 999986 899999999976 6777665332 356778899999887777643333333322 33333334443
Q ss_pred HHhhcCCCCCCCCCCCceEEEEEecCccc--ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHH
Q 038416 296 ERIKEIPCITCPVKPQGAMFVMVKLNVSM--LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLED 371 (387)
Q Consensus 296 ~~l~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~ 371 (387)
+..+.+|.+..+ .+. |.++++.+.... .+.......+... +.++||.+.|+..|+ +++|++++ .+++++++
T Consensus 335 ~l~~~~~~~~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~~ 409 (420)
T TIGR00700 335 TLKAVDPRIGDV-RGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELLSE 409 (420)
T ss_pred HHHhhCCCEEEe-ecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHHHH
Confidence 333445544433 333 778888763210 0000011233333 367799999987653 78999984 58999999
Q ss_pred HHHHHHHHHH
Q 038416 372 GLERIKAFCQ 381 (387)
Q Consensus 372 ~~~~l~~~~~ 381 (387)
++++|.++++
T Consensus 410 ~~~~l~~~l~ 419 (420)
T TIGR00700 410 GLDILCAILA 419 (420)
T ss_pred HHHHHHHHhh
Confidence 9999998874
No 222
>PRK07505 hypothetical protein; Provisional
Probab=99.91 E-value=1.5e-21 Score=182.69 Aligned_cols=316 Identities=14% Similarity=0.135 Sum_probs=192.2
Q ss_pred CCCCcHHHHHHHHHHhcCCC-CCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 23 LLSDSTVAEDAVVDALRTAH-YNCYSP-----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~-~~~y~~-----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
.+-.+|.+.+++++++..-. ...... .....++++.+++++ +. +.++++++++|+..++..+.
T Consensus 58 gl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~~~sG~~a~~~ai~~~~~~ 128 (402)
T PRK07505 58 GLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLTFTSCSAAHLGILPLLASG 128 (402)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEEECChHHHHHHHHHHHHhc
Confidence 44678999999999987411 111111 123455666666665 22 45545556678887776543
Q ss_pred --CCC-CeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 95 --RPG-ANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 95 --~~g-~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
.+| ..|++.+..|++... ... ..+.+++.+|. .|++.++++++++++++++++|+||+|.+++
T Consensus 129 ~~~~~~~~vi~~~~~~H~s~~~~~~~~--~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~-- 197 (402)
T PRK07505 129 HLTGGVPPHMVFDKNAHASLNILKGIC--ADETEVETIDH-------NDLDALEDICKTNKTVAYVADGVYSMGGIAP-- 197 (402)
T ss_pred ccCCCCCCEEEEchhhhHhHHhhhhhh--hcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEEEecccccCCcCC--
Confidence 223 246666655554321 112 23456666654 2789999988778899999999999999988
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccC--CCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFG--SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~--~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+++|.++|+++++++|+||+|+...++ +.... ...+. ..+++++++|+||.|+.+| ||+++++ +
T Consensus 198 -~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~-~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~-------~ 265 (402)
T PRK07505 198 -VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYV-RSELDYRLNERTIIAASLGKAFGASG---GVIMLGD-------A 265 (402)
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCcCCCCCchH-HHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC-------H
Confidence 688888899999999999998643332 22211 11122 2356889999999998776 8877543 2
Q ss_pred hHHHHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 245 GFVDSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 245 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++.+.+..... ++.+++++++.++.+.++...++++.+..+.++++.+.+...+... . .....++.++.++
T Consensus 266 ~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~-~g~~~~i~~~~~~ 339 (402)
T PRK07505 266 EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----Q-SGSFLPIRLIYIG 339 (402)
T ss_pred HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----C-CCCCCCEEEEEeC
Confidence 57777765432 2224455677776666653223344445555555554433222111 1 1111111222222
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
.. ....++...++ ++||.+.+...+.. .+++|+++. .++++++++++.|++++++
T Consensus 340 ~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 340 DE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 10 02345666664 66999998743322 268999996 6899999999999998865
No 223
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.91 E-value=1.5e-21 Score=184.29 Aligned_cols=354 Identities=15% Similarity=0.113 Sum_probs=207.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++..-|.-....++ .+|.+.+++++++..... .+......+.+..+++.+....+.+ ..+.++++++|++|++.
T Consensus 55 ~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e~ 130 (451)
T PRK06918 55 QYIDFAGAIGTINVGH-SHPKVKEALHKQVDQYIH--TGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVEN 130 (451)
T ss_pred EEEEcCCchhhcCCCC-CCHHHHHHHHHHHHhccC--ccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHHH
Confidence 4555544432222222 578899999999876322 1111112344555555555433211 12589999999999999
Q ss_pred HHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCC--CCccCC--------hhhHHH
Q 038416 89 SLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPE--KRWEVD--------LDGVEA 143 (387)
Q Consensus 89 ~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~~--------~~~l~~ 143 (387)
+++... ....+|+....+|++....+. +..+. .+..+|.+.. ...+.. ++.+++
T Consensus 131 AlklAr~~tgr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 131 AVKIARKYTKRQGIISFSRGFHGRTLMTM-TMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHhCCCcEEEECCCcCccchhhh-hhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 998754 223678889999998654443 01110 1122222110 000111 123333
Q ss_pred hh----ccCceEEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEec
Q 038416 144 LA----DENTVAIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGS 217 (387)
Q Consensus 144 ~~----~~~~~~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s 217 (387)
.+ .++..+.++..| +...|..+ +.+.+++|.++|++||+++|+||+|.++.+.+..+ ++..++.. ..+.|
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~-a~~~~~v~---pDi~t 285 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYF-AIEHFDVV---PDLIT 285 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCcee-hhHhcCCC---CCEEe
Confidence 32 234566677788 44457655 45559999999999999999999999987766432 33334321 12558
Q ss_pred CcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHH-HHHHHH
Q 038416 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKE-TADICY 295 (387)
Q Consensus 218 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~ 295 (387)
+||.++ +|+|+||+++++ ++.+.+.... ..+++.+++.+.++.+.++...+..+.++.+.+.+ .++.+.
T Consensus 286 ~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~ 356 (451)
T PRK06918 286 VSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFE 356 (451)
T ss_pred eehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 999986 899999999975 6776665332 35677889999997777765433333333322222 222332
Q ss_pred HHhhcCCCCCCCCCCCceEEEEEecCcc--cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHH
Q 038416 296 ERIKEIPCITCPVKPQGAMFVMVKLNVS--MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLED 371 (387)
Q Consensus 296 ~~l~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~ 371 (387)
+..++++.+..+ .+.++++.|...... ..++......+.. .+.++||.+.|+..| .+++|++++ .+++++++
T Consensus 357 ~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~ 432 (451)
T PRK06918 357 EMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICK-EANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEE 432 (451)
T ss_pred HHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHH-HHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHH
Confidence 222234433323 455555554433111 0111001223333 346779999997654 378999994 68999999
Q ss_pred HHHHHHHHHHHhh
Q 038416 372 GLERIKAFCQRHA 384 (387)
Q Consensus 372 ~~~~l~~~~~~~~ 384 (387)
++++|.++++++.
T Consensus 433 ~l~~l~~~l~~~~ 445 (451)
T PRK06918 433 GLTIIEESLQACY 445 (451)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 224
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.91 E-value=1.6e-21 Score=182.36 Aligned_cols=348 Identities=14% Similarity=0.129 Sum_probs=210.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++..-|.-....++ .+|.+.+++++++.......+. ....+.+..+++.+.+..+ ....+.+++++++++|++.
T Consensus 41 ~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA~e~ 116 (421)
T PRK09792 41 EYIDFAAGIAVLNTGH-RHPDLVAAVEQQLQQFTHTAYQ--IVPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEAVEN 116 (421)
T ss_pred EEEEccCchhhhcCCC-CCHHHHHHHHHHHHhccCcccC--ccCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHHHHH
Confidence 4555544433222222 5889999999998763221221 1123444555555544322 1123589999999999999
Q ss_pred HHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccC----ChhhHHHhhc---
Q 038416 89 SLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEV----DLDGVEALAD--- 146 (387)
Q Consensus 89 ~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----~~~~l~~~~~--- 146 (387)
+++... ....+|+....+|++...... +..+. .+..+|.+.... .+ +++.+++.++
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~ 194 (421)
T PRK09792 117 AVKIARAHTGRPGVIAFSGGFHGRTYMTM-ALTGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI 194 (421)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHH-hhcCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc
Confidence 998864 223678999999988643332 01111 122222221111 11 2467777765
Q ss_pred -cCceEEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc
Q 038416 147 -ENTVAIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 147 -~~~~~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
++..+.++..| ++++|..+ |++.+++|.++|++||+++|+||++.++.+.|.. ..+..+... .-+.+++|.++
T Consensus 195 ~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~---pDi~t~gK~l~ 270 (421)
T PRK09792 195 EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADK---PDLMTMAKSLA 270 (421)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCC---CcEEEeehhhc
Confidence 23334444555 88999865 8899999999999999999999999998777653 223333221 11568999975
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh-hcC
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERI-KEI 301 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 301 (387)
+|+|+|++++++ ++.+.+.... ..++..+++.+.++.+.++...+..+.++.+.+.++.....+.+ +.+
T Consensus 271 -~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~ 341 (421)
T PRK09792 271 -GGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESV 341 (421)
T ss_pred -CCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 789999999975 6666654332 24667888899877777665433322222223333222222333 335
Q ss_pred CCCCCCCCCCc-eEEEEEecCccc--ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHH
Q 038416 302 PCITCPVKPQG-AMFVMVKLNVSM--LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERI 376 (387)
Q Consensus 302 ~~~~~~~~~~~-g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l 376 (387)
|.+. .+.+ |.++|+.++... .+.......+...+ .++||.+.+... .++.+|+.+. .+++++++++++|
T Consensus 342 p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l 415 (421)
T PRK09792 342 PAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKIL 415 (421)
T ss_pred CCcc---eecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHH
Confidence 5332 4555 899999986421 00001123444544 567999864221 2578999984 6899999999999
Q ss_pred HHHHH
Q 038416 377 KAFCQ 381 (387)
Q Consensus 377 ~~~~~ 381 (387)
.++++
T Consensus 416 ~~~l~ 420 (421)
T PRK09792 416 QDALS 420 (421)
T ss_pred HHHHh
Confidence 99875
No 225
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=1.3e-21 Score=180.96 Aligned_cols=317 Identities=14% Similarity=0.048 Sum_probs=194.4
Q ss_pred CCCCCCCcHHHHHHHHHHhcCC-------CC--CCCC----CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 20 GVSLLSDSTVAEDAVVDALRTA-------HY--NCYS----PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~-------~~--~~y~----~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.|.++..++.+.+++.+++..- .. .+.. ...-+.++|+.++++++ . ++.+++++| ..++
T Consensus 13 ~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~~~l~~~sG-~~a~ 84 (370)
T PRK05937 13 DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-PEAFIVPSG-YMAN 84 (370)
T ss_pred CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CeEEEECCh-HHHH
Confidence 3457888888888888877542 01 1111 11236778888888883 2 233555554 5667
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc------cCceEEEEeCCCCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD------ENTVAIVIINPGNP 160 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~v~l~~p~np 160 (387)
..+...+.++||.|++..-.|.+....++ ........++ ..|+++|++.++ +++.+|++++++|+
T Consensus 85 ~~~~~~~~~~~d~ii~d~~~H~sv~~~~~--~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~ 155 (370)
T PRK05937 85 LGLCAHLSSVTDYVLWDEQVHISVVYSLS--VISGWHQSFR-------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSF 155 (370)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHH--HcCCceEEec-------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCC
Confidence 66666666788888888888877766666 4432333332 247888888875 24567778899999
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
+|.++| +++|.++|+++|+++|+|++|+...+..........+...+..+++.|+||.+|..| .| ++..+
T Consensus 156 ~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~~-vl~~~---- 225 (370)
T PRK05937 156 KGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AA-LLSSS---- 225 (370)
T ss_pred CCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--eE-EEcCH----
Confidence 999988 788888999999999999999953322111111111111122356789999988777 33 34432
Q ss_pred ccchhHHHHHHhh---hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 241 LQNSGFVDSIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 241 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
+..+.+... ..+..+.+++...++.++++...+. -....+++.++++++.+.|+.. + +.....
T Consensus 226 ----~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~------~~~~~~-- 291 (370)
T PRK05937 226 ----EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A------PGCVQP-- 291 (370)
T ss_pred ----HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C------CCCEEE--
Confidence 344444321 1233445666666666666543222 1334566777777777666432 1 111111
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+.++. .....+... +.++||.+... .+...+++|++++ ++++|++++++.|+++++++.+
T Consensus 292 i~~~~------~~~~~~~~~-L~~~gi~v~~~-~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 292 IFLPG------ISEQELYSK-LVETGIRVGVV-CFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred EEeCC------hhHHHHHHH-HHHCCeeEEee-CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 22332 123445444 46779988642 2223578999995 6899999999999999887643
No 226
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=4.3e-21 Score=177.13 Aligned_cols=315 Identities=13% Similarity=0.073 Sum_probs=208.6
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCC--CCCCCc----HHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYNCY--SPTLGV----PSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~~~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.|.++..+|.++++..++++.-..... ....|+ .+|++.+|+++ ..++.++.+++..|+..++.+|
T Consensus 111 dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~sSGy~AN~~~i~aL 182 (476)
T PLN02955 111 DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCPTGFAANMAAMVAI 182 (476)
T ss_pred CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEECChHHHHHHHHHHH
Confidence 455788999999999999875211101 012343 78999999998 4578888888888888888887
Q ss_pred c--------------CCCCeEEEcCCCCcchHHHhhccCC----CceeeeeccCCCCCccCChhhHHHhhcc---CceEE
Q 038416 94 A--------------RPGANILIPRPGYPLYEIHAAGSNN----NLEARHYDLLPEKRWEVDLDGVEALADE---NTVAI 152 (387)
Q Consensus 94 ~--------------~~g~~vl~~~p~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v 152 (387)
. ++++.|++..-+|.+....++ .. +.++..++.+ |++.|++.++. +.++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~--ls~~~~~a~~~~f~HN-------D~~~Le~~L~~~~~~~~~V 253 (476)
T PLN02955 183 GSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR--LAERQGNVEVFVYRHC-------DMYHLNSLLSSCKMKRKVV 253 (476)
T ss_pred hhccccccccccccCCCCcEEEEeccchHHHHHHHH--hccccCCceEEEeCCC-------CHHHHHHHHHhCCCCceEE
Confidence 2 455678888888988888877 54 4566665532 67888877743 33444
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
++....++.|.+.| +++|.++|++||+++|+||+|+.+.++..+......+. ..+..++++|++|++|..| |+
T Consensus 254 v~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gf 327 (476)
T PLN02955 254 VTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GF 327 (476)
T ss_pred EEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ce
Confidence 44444789999988 88888888899999999999997776543333222222 1345689999999987666 99
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh--ccCCcch-HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCLN--AASHPVT-FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPV 308 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 308 (387)
+++++ ++++.++.... .++++.+ ....++.+.++.... -..+.++++++.+++++.+ ++. .
T Consensus 328 i~gs~--------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~~----G~~-~- 391 (476)
T PLN02955 328 IACSK--------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKALS----GVD-I- 391 (476)
T ss_pred eecHH--------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhc----CCC-C-
Confidence 99876 67777775432 2223333 333344444443211 1245677778888887642 444 2
Q ss_pred CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 309 KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
+ ...+.+.+... .....+..+| .++||.+.+-..... ...+||++ .++++|++.+++.|.++...
T Consensus 392 -~--sPI~pI~ig~~-----~~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 392 -S--SPIISLVVGNQ-----EKALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred -C--CCEEEEEeCCH-----HHHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 33333333321 1234455555 567999987554433 24699999 46899999999999887644
No 227
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=2.1e-21 Score=180.96 Aligned_cols=296 Identities=15% Similarity=0.137 Sum_probs=196.0
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~~ 125 (387)
....++++.+|++.+ .+..++++|+++|+++++.+++++||+|+++...|.+....+ . ..|+++..
T Consensus 64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~--~~Gi~v~~ 133 (433)
T PRK08134 64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLR--RFGIETTF 133 (433)
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHh--hCCeEEEE
Confidence 456889999999883 245788999999999999999999999999999998654443 4 58888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.. |+++++++++++|++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.+++.... ..++ .
T Consensus 134 vd~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~ 198 (433)
T PRK08134 134 VKPG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-E 198 (433)
T ss_pred ECCC-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-h
Confidence 8752 789999999999999999999999999977 88899999999999999999874221 2222 2
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeCCCCcccch-------------------------hHHHHHH--hhhhccC
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS-------------------------GFVDSIK--GCLNAAS 258 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~-------------------------~~~~~~~--~~~~~~~ 258 (387)
+..+ +++.|.+|.++.+|-.+|.+++......+.+. .+..+.+ .......
T Consensus 199 ~GaD---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 275 (433)
T PRK08134 199 HGAD---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGA 275 (433)
T ss_pred cCCC---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCC
Confidence 3333 88999999988888777777663211110000 0001111 1112333
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEEecC
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-----------------GAMFVMVKLN 321 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~g~~~~~~~~ 321 (387)
..+++..+.+..-|+. +..+.++..+++..+.+.|+++|.+..+.+|. .|.++.+.+.
T Consensus 276 ~ls~~~A~l~~~gL~t-----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~ 350 (433)
T PRK08134 276 CLSPMNAWQLLQGIET-----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLK 350 (433)
T ss_pred CCCHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEec
Confidence 4455444444333433 78888888999999999999877654333331 2344555553
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
.. ......+++.+ +=..+..+-|+... . ++.+|+|++. |+.+.+++.|.+
T Consensus 351 ~~----~~~~~~f~~~l-~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl--E~~~dli~dl~~ 423 (433)
T PRK08134 351 GG----RAAGRKFIESL-KLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL--EDADDLIDDLKR 423 (433)
T ss_pred CC----HHHHHHHHHhC-CcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHH
Confidence 10 01122333332 11111111121110 0 3579999999 677788888888
Q ss_pred HHHHhhh
Q 038416 379 FCQRHAK 385 (387)
Q Consensus 379 ~~~~~~~ 385 (387)
+++..++
T Consensus 424 Al~~~~~ 430 (433)
T PRK08134 424 ALKAAEK 430 (433)
T ss_pred HHHhhhh
Confidence 8877654
No 228
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.91 E-value=1.8e-21 Score=182.29 Aligned_cols=319 Identities=15% Similarity=0.128 Sum_probs=204.0
Q ss_pred CCcHHHHHHHHHHhcCC----CCCCCC---CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC
Q 038416 25 SDSTVAEDAVVDALRTA----HYNCYS---PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG 97 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~----~~~~y~---~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g 97 (387)
+.|+.+.+++.+.+... ....+. ......+.++.+ +++ ++++++|++++|+|++++.++.++.+++
T Consensus 38 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~~~t~~l~~~~~~~~~~~ 110 (406)
T TIGR01814 38 LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMNTLTINLHLLLASFYKPT 110 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeCCchHHHHHHHHHhcCCc
Confidence 45888999998766531 111111 101111222223 343 4678999999999999999999986554
Q ss_pred ---CeEEEcCCCCcch----HHHhhccCCCcee----eeeccCCCCCccCChhhHHHhh---ccCceEEEEeCCCCCccc
Q 038416 98 ---ANILIPRPGYPLY----EIHAAGSNNNLEA----RHYDLLPEKRWEVDLDGVEALA---DENTVAIVIINPGNPCGN 163 (387)
Q Consensus 98 ---~~vl~~~p~~~~~----~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~l~~p~nptG~ 163 (387)
+.|++...+|++. ...++ ..|.++ ..++. .+++.++++.+++.+ ++++++|++++++|.||.
T Consensus 111 ~~~~~i~~~~~~~~s~~~~~~~~~~--~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~ 186 (406)
T TIGR01814 111 PKRYKILLEAKAFPSDHYAIESQLQ--LHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQ 186 (406)
T ss_pred CCccEEEecCCCCChHHHHHHHHHH--hcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccce
Confidence 3688888899863 33445 668776 34443 334467888888876 468999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~ 242 (387)
.+| +++|.++|+++|+++++|++++. |..+..+...+.+ +++.|.+|+++ .+| .|..+.++.. ...
T Consensus 187 ~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gvD---~~~~s~hK~l~g~pG--~~l~v~~~~~-~~~ 253 (406)
T TIGR01814 187 LFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGVD---FACWCTYKYLNAGPG--AGAFVHEKHA-HTE 253 (406)
T ss_pred ecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCCCC---EEEEcCccccCCCCC--eEEEEehhhh-hhc
Confidence 988 88889999999999999999996 3222333333333 88999999863 444 3433333211 000
Q ss_pred chhHHHHHH----------------hhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----C
Q 038416 243 NSGFVDSIK----------------GCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----P 302 (387)
Q Consensus 243 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~ 302 (387)
.|.+..+.. ......++++..+..++.++++...+..+++..++...+.+++++.|+++ +
T Consensus 254 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~ 333 (406)
T TIGR01814 254 RPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPP 333 (406)
T ss_pred CCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 111000000 00001245666777777777776545557788888888888888888764 3
Q ss_pred CCCCCCCCC----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHH
Q 038416 303 CITCPVKPQ----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLER 375 (387)
Q Consensus 303 ~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~ 375 (387)
++.+. .|. .+..+.+.++. +..++...| .++||.+... .++.+|+|+ + ++++|++++++.
T Consensus 334 ~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~~~~nt~~did~l~~~ 400 (406)
T TIGR01814 334 VLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPVPLYNTFVDVYDAVNV 400 (406)
T ss_pred ceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeEEEechhccCCHHHHHHHHHH
Confidence 46533 331 12344445541 345666666 5669987532 246899998 3 488999999999
Q ss_pred HHHHH
Q 038416 376 IKAFC 380 (387)
Q Consensus 376 l~~~~ 380 (387)
|++++
T Consensus 401 l~~~~ 405 (406)
T TIGR01814 401 LEEIL 405 (406)
T ss_pred HHHHh
Confidence 98764
No 229
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=3.7e-21 Score=179.15 Aligned_cols=298 Identities=16% Similarity=0.084 Sum_probs=198.4
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~ 125 (387)
.....|++.++++. ..+..+++++|+.|+..++.+++++||+|+++...|.+.... +. ..|+++..
T Consensus 69 p~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~--~~Gi~v~~ 138 (436)
T PRK07812 69 PTQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLP--KLGIEVSF 138 (436)
T ss_pred chHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhh--cCeEEEEE
Confidence 45678888999887 235678888889999999999999999999999888875533 34 57777776
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++ +. .|++++++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++... ...++ .
T Consensus 139 vd-d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~----~~~pl-~ 204 (436)
T PRK07812 139 VE-DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPY----LIRPL-E 204 (436)
T ss_pred EC-CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc----cCCch-h
Confidence 64 11 2899999999999999999999999999977 7888899999999999999987421 11222 1
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeCCCCccc-----------------------chhHHHHHHh--hhhccCCc
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ-----------------------NSGFVDSIKG--CLNAASHP 260 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~-----------------------~~~~~~~~~~--~~~~~~~~ 260 (387)
+.. .+++.|++|.++..|--+|.+++.....-+. ++++..+.+. ....+...
T Consensus 205 ~Ga---Divv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l 281 (436)
T PRK07812 205 HGA---DIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAI 281 (436)
T ss_pred cCC---CEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCC
Confidence 222 2778999999987776677777642210000 0011111221 12345566
Q ss_pred chHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEEecCcc
Q 038416 261 VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-----------------QGAMFVMVKLNVS 323 (387)
Q Consensus 261 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------------~~g~~~~~~~~~~ 323 (387)
+++..+.+..-|+. +..+.++..+++..+.+.|++.|.+..+.+| ..|.++.+.+...
T Consensus 282 ~p~~a~l~~rgl~t-----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~ 356 (436)
T PRK07812 282 SPFNAFLIAQGLET-----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGG 356 (436)
T ss_pred CHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC
Confidence 66655555444444 7888899999999999999998877655555 1244555555321
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
......+++.+ +=..+.++-|+... . ++.+|+|++. |+.+.+++.|.+++
T Consensus 357 ----~~~~~~f~~~l-~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl--Ed~~dli~dl~~Al 429 (436)
T PRK07812 357 ----VEAGKAFVNAL-TLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI--EGIDDILADLEAGF 429 (436)
T ss_pred ----HHHHHHHHHhC-CcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 01123444433 21122111121110 0 3579999998 67888888888888
Q ss_pred HHhhhc
Q 038416 381 QRHAKK 386 (387)
Q Consensus 381 ~~~~~~ 386 (387)
+..++.
T Consensus 430 ~~~~~~ 435 (436)
T PRK07812 430 AAAKAF 435 (436)
T ss_pred Hhhhcc
Confidence 876653
No 230
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=2.9e-21 Score=178.10 Aligned_cols=301 Identities=19% Similarity=0.202 Sum_probs=200.8
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcCCCCcch
Q 038416 32 DAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPRPGYPLY 110 (387)
Q Consensus 32 ~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~p~~~~~ 110 (387)
+++.+.+..+.+ .......++++.++++++ .+++++++|+++++..++.++ .++||+|+++.++|.++
T Consensus 3 ~~~~~~~~~~~~---~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGWL---TLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCCc---cCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 455666655432 223457899999999983 357888889999999999998 58999999999999999
Q ss_pred HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccc
Q 038416 111 EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 111 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~ 190 (387)
...+. ..|.++..+++++ +++.+|++.+++.+++++++|++++ ++|...+ +++|.++|+++|+++|+|+++
T Consensus 72 ~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~ 142 (352)
T cd00616 72 ANAIL--LLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQ 142 (352)
T ss_pred HHHHH--HcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCC
Confidence 88888 8999999998854 3567899999999988899888765 6888766 788888999999999999999
Q ss_pred cccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc----------
Q 038416 191 NHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA---------- 257 (387)
Q Consensus 191 ~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~---------- 257 (387)
+... +.+. .+... ..+.+.|++ |++ ++.+.|+++.++ +++.++++......
T Consensus 143 ~~g~~~~~~---~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 206 (352)
T cd00616 143 ALGATYKGR---KVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEH 206 (352)
T ss_pred CCCCeECCE---EcccC----cceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccc
Confidence 8432 2111 11111 125667766 875 444568888764 24555554432111
Q ss_pred ------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEEEEecCcccccC
Q 038416 258 ------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----GAMFVMVKLNVSMLED 327 (387)
Q Consensus 258 ------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~ 327 (387)
...+......... ....+++..++.+++.+++++.|.+++++.....+. ....+.+.++.. .
T Consensus 207 ~~~~~~~~~~~~~aa~~~~-----~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~ 278 (352)
T cd00616 207 EILGYNYRLSEIQAAIGLA-----QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---A 278 (352)
T ss_pred ceeeeccCcCHHHHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---C
Confidence 1111211111111 123467777888889999999999988888543322 112333334310 0
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccC----------------C-------CCeEEEEee--CChHhHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVG----------------M-------KNWLRIAFA--AEPATLEDGLERIK 377 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~~Ri~~~--~~~e~~~~~~~~l~ 377 (387)
..+..++...| +++||.+....... . .+.+|++++ .+++|++.+++.|+
T Consensus 279 ~~~~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 279 GESRDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCCHHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 12455666665 66699665221110 0 157999994 68999999988763
No 231
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=3.1e-21 Score=177.72 Aligned_cols=220 Identities=17% Similarity=0.147 Sum_probs=157.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
.....|++.++++.+ .+..+++++++.++..++ .++++||+|+++.|.|.+... .+. ..|.++..
T Consensus 50 p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~--~~G~~v~~ 118 (377)
T PRK07671 50 PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLN--RFGIEHTF 118 (377)
T ss_pred hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHh--cCCeEEEE
Confidence 456788999999883 234455666677887765 567899999999999985432 334 57888887
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||+|...+ +++|.++|+++|+++|+|++|+...+. . ++ .
T Consensus 119 v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~-~ 183 (377)
T PRK07671 119 VDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PI-S 183 (377)
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-C---hh-h
Confidence 753 3789999999999999999999999999865 888888899999999999999753221 1 22 1
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhhc-cCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLNA-ASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+. ..+++.|++|.++.++ .-.|++++++ ++++++++..+.. ....++...+.+..-+ ..+..+
T Consensus 184 ~g---~Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l-----~tl~~R 248 (377)
T PRK07671 184 LG---ADIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGL-----KTLGIR 248 (377)
T ss_pred hC---CeEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCc-----ChHHHH
Confidence 22 2488999999987543 3456676644 2577777765542 3444554444433333 236668
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
.++..++++.+.+.|++.|.+..+.+|
T Consensus 249 ~~~~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 888889999999999987766544444
No 232
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.7e-21 Score=180.74 Aligned_cols=228 Identities=17% Similarity=0.113 Sum_probs=163.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
.....|++.++++.+ .+..++++++++|+..++.+++++||+|+++.+.|.+... .+. ..|.++..
T Consensus 63 p~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~--~~G~~v~~ 132 (427)
T PRK05994 63 PTNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFK--SFGWQVRW 132 (427)
T ss_pred ccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHH--hcCcEEEE
Confidence 346788899998872 3468888999999999999999999999999999986433 355 68888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++++... ...++ .
T Consensus 133 vd~-------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~ 197 (427)
T PRK05994 133 ADA-------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-E 197 (427)
T ss_pred ECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-c
Confidence 764 2789999999989999999999999999987 7888999999999999999998421 11222 1
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeCCCCccc---------c--hh-----HH-----------HHHHhhhhccC
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ---------N--SG-----FV-----------DSIKGCLNAAS 258 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~---------~--~~-----~~-----------~~~~~~~~~~~ 258 (387)
+.. .+++.|++|.++.+|-.+|.+++......+. . +. +. ...+.....+.
T Consensus 198 ~ga---Divv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 274 (427)
T PRK05994 198 HGA---DIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGP 274 (427)
T ss_pred cCC---cEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCC
Confidence 223 3889999999887776677766632110000 0 00 11 11111222344
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
..+++..+.+..-|+. +..+.++.++++..+.+.|++.|.+..+.+|
T Consensus 275 ~~~~~~A~l~~~~l~t-----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 275 AISPFNAFLILTGIET-----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred CCCHHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 5555555544444443 7888899999999999999988776544444
No 233
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.90 E-value=5.4e-21 Score=177.65 Aligned_cols=343 Identities=13% Similarity=0.097 Sum_probs=216.7
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
..++|+.-|......++ .+|.+.+++++++.+.. +++.. ...+.+..+++.+.+..+ ..+.+++++++++|++
T Consensus 40 ~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e 112 (408)
T PRK04612 40 REYLDLAAGIAVCGLGH-NDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTEANE 112 (408)
T ss_pred CEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHH
Confidence 34555544432122122 57888999999887531 22221 223445566666654322 1268999999999999
Q ss_pred HHHHhhcC----C----C-CeEEEcCCCCcchHHHhhccCCCceeee---eccCCC---CCccCChhhHHHhhccCceEE
Q 038416 88 ISLSVLAR----P----G-ANILIPRPGYPLYEIHAAGSNNNLEARH---YDLLPE---KRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 88 ~~~~~l~~----~----g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~---~~~~~~~~~l~~~~~~~~~~v 152 (387)
.+++.... . + .+|+....+|++...... +..+..... -++.+. -. ..|++.++++++++..++
T Consensus 113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~~~~~~aa 190 (408)
T PRK04612 113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAV-TATAQPKYQEGYEPLPGGFRYVD-FNDVEALEAAMAGGDVAA 190 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHH-HhcCCcccccCCCCCCCCceEcC-CCCHHHHHHhhCCCCEEE
Confidence 99987541 1 2 468999999988654333 022211100 011100 01 126788888887677888
Q ss_pred EEeCCCCCccccCC--HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINPGNPCGNVFS--YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p~nptG~~~~--~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
++..|.+++|-+++ .+.+++|.++|++||+++|+||+|.++...|..+.. . ..+..+.+.+++|.++ +|+|+|
T Consensus 191 vi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~---~-~~~~~pdi~t~~K~l~-~G~pig 265 (408)
T PRK04612 191 VMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH---W-QEQVTPDIVTLAKALG-GGFPIG 265 (408)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh---h-hcCCCCCEEEEcchhc-CCCceE
Confidence 88899776665544 578999999999999999999999987766542221 1 1123466789999986 789999
Q ss_pred EEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCC
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCIT 305 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~ 305 (387)
++++++ ++.+.+.... ..+++.+++.+.++.+.|+...+. +..++++++.+++.+.|++ .+.+.
T Consensus 266 a~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~ 334 (408)
T PRK04612 266 AMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFA 334 (408)
T ss_pred EEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 999875 5666665432 245667899999998888764432 3344555555555555554 32222
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
. ...-|.++.+.+..... .....+.. .+.++|+.+.+.. .+.+|+.+ ..++++++.++++|.++++++
T Consensus 335 ~--vrg~Gl~~~i~~~~~~~---~~a~~i~~-~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 335 Q--VRGRGLMLGAVLAPAHA---GQAGAILD-LAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred e--eeccceEEEEEecCchh---hHHHHHHH-HHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 22336566666532100 01234444 4567899997742 47899998 468999999999999999875
Q ss_pred hh
Q 038416 384 AK 385 (387)
Q Consensus 384 ~~ 385 (387)
-+
T Consensus 405 ~~ 406 (408)
T PRK04612 405 VA 406 (408)
T ss_pred hh
Confidence 43
No 234
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.7e-21 Score=167.65 Aligned_cols=323 Identities=15% Similarity=0.188 Sum_probs=211.8
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
++.-.+++|++.++|.++-... ...|+..+....+++.+++.+ ....++++.++|+++.+++.+.++||..
T Consensus 6 SDn~~g~~~~m~eam~~a~~~~-~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal~~~~~~~~~ 76 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAVG-DDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLALAAHCQPGES 76 (342)
T ss_pred cCccCCCCHHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHHHHhcCCCCe
Confidence 3434578999999999987322 246888777788888888887 3389999999999999999999999999
Q ss_pred EEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHH
Q 038416 100 ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 100 vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
|++..-.|-...+......++ +...++..+..+..++++++++.+.+ .+..+++.+.++..|+++|.+++++|
T Consensus 77 vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i 155 (342)
T COG2008 77 VICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAI 155 (342)
T ss_pred EEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHH
Confidence 999888886544332200222 33444555556678999999998764 24566667776689999999999999
Q ss_pred HHHHHhcCcEEeeccccccc--ccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 174 ARTARNLGIIVIADEVYNHL--AFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 174 ~~~~~~~~~~li~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
.++|+++|++|+.|.+--.- ...+.....+..+ ..++++ ++||..+.+ +|.++.-+ .+++++++
T Consensus 156 ~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~---~D~v~~-~~tK~g~~~---~gAiv~gn-------~~~~~~a~ 221 (342)
T COG2008 156 SAVCKEHGLPLHMDGARLANALVALGVALKTIKSY---VDSVSF-CLTKGGGAP---VGAIVFGN-------RDFAKRAR 221 (342)
T ss_pred HHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhh---CCEEEE-ecccCCcce---eeeEEEcC-------HHHHHHHH
Confidence 99999999999999876531 1112222222222 234444 488985444 57777654 36888777
Q ss_pred hhhh-ccCC--cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 252 GCLN-AASH--PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 252 ~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
..+. .... -+.+..+....+|++ .......+.-...+..+.+.|+..||+.+. .|...+++|++++....
T Consensus 222 ~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~-~~~~tN~vf~~l~~~~i--- 294 (342)
T COG2008 222 RWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLA-FPVETNMVFVRLPESAI--- 294 (342)
T ss_pred HHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceec-cCCcccEEEEECChHHH---
Confidence 6643 2222 233333333344443 212222233334577788888877898854 66778899999875211
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
+...+ ...+...|+.+.+++ ..+|+.++ ++++++++++..+++++
T Consensus 295 -~~l~~-~~~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 295 -EALRL-AGALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -HHHHh-hchhheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 11111 112233344443321 46899884 68999999999887764
No 235
>PLN02509 cystathionine beta-lyase
Probab=99.90 E-value=3.8e-21 Score=179.55 Aligned_cols=228 Identities=18% Similarity=0.164 Sum_probs=158.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCC
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNN 119 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~ 119 (387)
..|... +. ..++.+.+++.+.. ..+++++++|+++++.+++ .++++||+|+++.|.|.++. ..+. ..
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~--~~ 195 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVP--RS 195 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHH--HC
Confidence 356653 33 24555555555433 3456777788888987666 56899999999999999875 3345 67
Q ss_pred CceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC
Q 038416 120 NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP 199 (387)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~ 199 (387)
|+++..++. .|++++++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|+.... +.
T Consensus 196 G~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~- 263 (464)
T PLN02509 196 GVVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-SR- 263 (464)
T ss_pred CeEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-CC-
Confidence 888887753 26899999999999999999999999997 6699999999999999999999874322 11
Q ss_pred CccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccH
Q 038416 200 YVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNE 277 (387)
Q Consensus 200 ~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~ 277 (387)
++ .... .+++.|++|+++.+| .-.|++++++. .+.+.++.... .....+++..+.+..-|
T Consensus 264 --pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L----- 325 (464)
T PLN02509 264 --PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGI----- 325 (464)
T ss_pred --hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhh-----
Confidence 22 1222 388999999976543 34577766441 34444443332 22334554444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+.+..+.++..++++.+.+.|++.|.+..+.+|
T Consensus 326 ~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 326 KTMALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 347788899999999999999998877655555
No 236
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=1.4e-20 Score=173.30 Aligned_cols=310 Identities=18% Similarity=0.236 Sum_probs=199.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
.++...+++.+.+..+...+ . ..+++++.+++.+.. +.+++++|+|+++|+..++.++ +++||+|+++.
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~--~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~ 78 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSG--D----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPS 78 (376)
T ss_pred CCHHHHHHHHHHHHcCCccC--C----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 45666888888887643311 1 234444444444432 3468999999999999999887 79999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
++|..+...+. ..|.+++.+++++ +++.+|++++++++++++++|+ |+||+|...+ +++|.++|+++|++|
T Consensus 79 ~t~~~~~~~~~--~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~v 149 (376)
T TIGR02379 79 YTFVSTANAFV--LRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFV 149 (376)
T ss_pred CCcHHHHHHHH--HcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEE
Confidence 99999888888 8999999999864 3477999999999988898886 5667898876 778999999999999
Q ss_pred eecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCC--
Q 038416 185 IADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASH-- 259 (387)
Q Consensus 185 i~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 259 (387)
|+|++++.+. +.+.....+. .+.+.||+ |.+ .+|.+.|++++++ +++.++++..+..+..
T Consensus 150 IeDaa~~~g~~~~~~~~g~~~-------~~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~ 214 (376)
T TIGR02379 150 IEDAAQGVMSTYKGRALGSIG-------HLGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRS 214 (376)
T ss_pred EEECccccCCccCCcccCCCC-------CEEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCc
Confidence 9999998754 5443332221 13344443 553 5566789998875 3677777765432211
Q ss_pred --------------------cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCc---e
Q 038416 260 --------------------PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP--C-ITCPVKPQG---A 313 (387)
Q Consensus 260 --------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~---g 313 (387)
++. .++++. +. .-..+++..++.+++.++..+.|.+++ + +.....+.+ .
T Consensus 215 ~~~~~~~~~~~~~~~g~n~~~~~-~~Aa~g--~~--qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 289 (376)
T TIGR02379 215 QFFRGEVDKYTWRDIGSSYLPSE-LQAAYL--WA--QLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHN 289 (376)
T ss_pred cccccCCCcceeeeecccCCccH-HHHHHH--HH--HHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeee
Confidence 111 111111 11 123456666666666666777776643 1 221111211 1
Q ss_pred -EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc----cC------C------------CCeEEEEe--eCChHh
Q 038416 314 -MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT----VG------M------------KNWLRIAF--AAEPAT 368 (387)
Q Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----~~------~------------~~~~Ri~~--~~~~e~ 368 (387)
.++++.++.. .+..++...| +++||.+.++.. +. . ...+.+-+ ..++++
T Consensus 290 ~~~~~i~~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~ 363 (376)
T TIGR02379 290 AHMFYIKLKDE-----DDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKED 363 (376)
T ss_pred eEEEEEEECCc-----CCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHH
Confidence 1234445421 1345666655 777998774321 00 0 12344444 357899
Q ss_pred HHHHHHHHHHHH
Q 038416 369 LEDGLERIKAFC 380 (387)
Q Consensus 369 ~~~~~~~l~~~~ 380 (387)
++..++.|++++
T Consensus 364 ~~~i~~~i~~~~ 375 (376)
T TIGR02379 364 QARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHh
Confidence 999999988754
No 237
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=4.3e-21 Score=176.78 Aligned_cols=284 Identities=18% Similarity=0.149 Sum_probs=183.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~ 125 (387)
.....|++.++++.+ .+..+++++++.|+.+++ .++++||+|+++.|.|.+.. ..+. ..|+++..
T Consensus 50 p~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~--~~gi~v~~ 118 (380)
T PRK06176 50 PTRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLV--KNGLSCTI 118 (380)
T ss_pred hhHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHH--hcCeEEEE
Confidence 346788999998872 334566677778998766 46789999999999997653 3345 67888777
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||+|..++ +++|.++|+++|+++|+|++|+...+. . ++ .
T Consensus 119 vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~---p~-~ 183 (380)
T PRK06176 119 IDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N---PL-L 183 (380)
T ss_pred cCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C---cc-c
Confidence 653 3789999999999999999999999999976 778889999999999999999853321 1 22 1
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhhc-cCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLNA-ASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
... .+++.|++|.++.++ .-.|+++.++ +++.++++..+.. ....++...+.+...++ .+..+
T Consensus 184 ~ga---Divv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~-----tl~~R 248 (380)
T PRK06176 184 LGA---DIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK-----TLGLR 248 (380)
T ss_pred cCC---CEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC-----cHHHH
Confidence 222 388999999987655 3456666543 2466666654432 23334444333322222 24566
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
.+++.+++..+.+.|++.|.+..+.+|. .|..+.+.+... .....+++.+ +-..+.+.
T Consensus 249 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-----~~~~~f~~~l-~~~~~~~s 322 (380)
T PRK06176 249 MEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND-----SEAVAFVESL-KLFILGES 322 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH-----HHHHHHHHcC-CcceEccC
Confidence 6666777778888887766554333332 244555566310 1122333322 11111111
Q ss_pred cCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 348 PGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 348 ~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
-|+.. +. ++.+|+|++. |+.+.+++.|++++++
T Consensus 323 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 323 LGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI--EHEQDLLEDLEQAFAK 378 (380)
T ss_pred CCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 11110 00 3579999998 6788888888888865
No 238
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=7.2e-21 Score=176.11 Aligned_cols=316 Identities=14% Similarity=0.110 Sum_probs=205.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
.++.-.+++.+.+..... .++ ....+|++.++++++ .+++++++|+++|+.+++.++ +++||+|+++.
T Consensus 12 ~~~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~ 80 (379)
T PRK11658 12 MGDEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPS 80 (379)
T ss_pred CCHHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 346668888888876433 222 356899999999993 246888999999999999999 79999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
++|..+...+. ..|++++.+++++ +++.+|++++++++++++++|+ |+|++|...+ +++|.++|+++|+++
T Consensus 81 ~~~~~~~~~~~--~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~v 151 (379)
T PRK11658 81 LTWVSTLNMIV--LLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPV 151 (379)
T ss_pred CcHHHHHHHHH--HcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeE
Confidence 99999988888 8999999999864 3467899999999988898887 5557898865 788899999999999
Q ss_pred eecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcc--
Q 038416 185 IADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV-- 261 (387)
Q Consensus 185 i~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 261 (387)
|+|++++. ..+.+.. +... . +.+.||++...+++.+.|+++.++ +++.++++.....+...+
T Consensus 152 i~D~a~a~g~~~~~~~---~g~~---g--~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~ 216 (379)
T PRK11658 152 IEDAAHAVGTYYKGRH---IGAR---G--TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAF 216 (379)
T ss_pred EEECCCccCCeECCee---cCCC---C--CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchh
Confidence 99999984 3333321 2111 1 134566655556677788888754 256666665432111000
Q ss_pred ------------------hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEE-EE
Q 038416 262 ------------------TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----GAMFV-MV 318 (387)
Q Consensus 262 ------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~g~~~-~~ 318 (387)
++....+.+++.......+++..++.+++.+.+.+.|++++... +..|. ..+++ .+
T Consensus 217 ~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~ 295 (379)
T PRK11658 217 DRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFII 295 (379)
T ss_pred hhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEE
Confidence 00001111122211235577778888888888888998875333 21222 12222 23
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc-------cC-------C-------CCeEEEEe--eCChHhHHHHHHH
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT-------VG-------M-------KNWLRIAF--AAEPATLEDGLER 375 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~~Ri~~--~~~~e~~~~~~~~ 375 (387)
.++... .+ .+..++...| +++||.+..... |. . ...+-+-+ ..++++++..++.
T Consensus 296 ~~~~~~-~~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 296 RVDEER-CG-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA 372 (379)
T ss_pred EECCcc-cc-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 343210 01 1345666665 667987653210 00 0 12333333 3578999999999
Q ss_pred HHHHH
Q 038416 376 IKAFC 380 (387)
Q Consensus 376 l~~~~ 380 (387)
|++++
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 88765
No 239
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=7e-21 Score=174.18 Aligned_cols=288 Identities=13% Similarity=0.111 Sum_probs=199.2
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~ 124 (387)
.+....|++.++++- ..+..++++||+.|+..++.+++++||+|+++...|.++...+ + ..|+++.
T Consensus 61 nPt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~--~~Gi~v~ 130 (395)
T PRK08114 61 TLTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILS--KLGVTTT 130 (395)
T ss_pred ChhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHH--hcCcEEE
Confidence 456678888888865 4568888888999999999999999999999999998776554 5 6898888
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc--CcEEeecccccccccCCCCCcc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL--GIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~~~~~~ 202 (387)
.++. .|.++++++++++|++|++.+|+||+|.+.+ +++|+++|+++ |+++++|.+++... ...
T Consensus 131 ~vd~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~----~~~- 195 (395)
T PRK08114 131 WFDP-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV----LFK- 195 (395)
T ss_pred EECC-------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc----ccC-
Confidence 8763 3678899999999999999999999999977 88899999998 49999999998521 111
Q ss_pred ccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHH
Q 038416 203 MGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFF 280 (387)
Q Consensus 203 ~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~ 280 (387)
...+.. .+++.|.+|.++.++ .-.|.++.++ +.++.++... ..+...+++..+.+..-|+. +
T Consensus 196 pl~~Ga---Divv~S~tKyl~Ghsdv~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L 259 (395)
T PRK08114 196 ALDFGI---DISIQAGTKYLVGHSDAMIGTAVANA--------RCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----L 259 (395)
T ss_pred HHHcCC---cEEEEcCcccccCCCcceeEEEEcCH--------HHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----H
Confidence 222333 399999999876554 5677666543 4555555433 24556667666665555554 7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCe
Q 038416 281 AKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESV 344 (387)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (387)
.-+.++..+++..+.+.|++.|.+..+.+|. .|.++.+.+... . +......+++.+ +-..+
T Consensus 260 ~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~-~-~~~~~~~f~~~l-~l~~~ 336 (395)
T PRK08114 260 GVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKK-L-TDEQLANYLDNF-SLFSM 336 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCc-c-cHHHHHHHHHhC-Cccee
Confidence 7788999999999999999887665554542 344555555420 0 000122333332 11111
Q ss_pred EEEcCCcc--------------------C-CCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 345 IILPGRTV--------------------G-MKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 345 ~v~~g~~~--------------------~-~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.++-|+.- + .++.+|+|++. |+.+.+++.|.++++.
T Consensus 337 a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl--Ed~~DLi~Dl~~Al~~ 393 (395)
T PRK08114 337 AYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL--EDVDDLIADLAAGFAR 393 (395)
T ss_pred ecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc--CCHHHHHHHHHHHHHh
Confidence 11111100 0 12579999998 6778888888888765
No 240
>PLN02624 ornithine-delta-aminotransferase
Probab=99.90 E-value=5.4e-21 Score=181.09 Aligned_cols=326 Identities=14% Similarity=0.107 Sum_probs=200.9
Q ss_pred CcHHHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC---------
Q 038416 26 DSTVAEDAVVDALRTAHYNC-YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~-y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------- 95 (387)
.+|.+.+++++++....... +.......+|.+.+++++ ..+.++++++|++|++.+++....
T Consensus 92 ~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~ 163 (474)
T PLN02624 92 CHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIP 163 (474)
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCC
Confidence 48999999999998632211 111223345555555543 246899999999999999986432
Q ss_pred CC-CeEEEcCCCCcchHHHhhccCCCceeee---eccCCC---CCccCChhhHHHhhc---cCceEEEEeCCCCCccccC
Q 038416 96 PG-ANILIPRPGYPLYEIHAAGSNNNLEARH---YDLLPE---KRWEVDLDGVEALAD---ENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 96 ~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~---~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~ 165 (387)
++ ..|+....+|++...... +..+-.... .|..+. -.+ -|++.+++.++ ++..+|++..++|++|.++
T Consensus 164 ~~~~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~ 241 (474)
T PLN02624 164 KNEAIIVSCCGCFHGRTLAAI-SMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVI 241 (474)
T ss_pred CCCcEEEEECCCcCCCCHHHh-hcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcC
Confidence 12 357778888887643333 011111000 011000 000 16788888775 2456677777799999987
Q ss_pred CHH-HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 166 SYQ-HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~-~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
|++ .+++|.++|++||+++|+||+|.++...|.... ......... +.+++|.++.+++++|+++.++
T Consensus 242 p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a-~~~~~i~pD---iv~lsK~lggG~~pigav~~~~-------- 309 (474)
T PLN02624 242 PPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLA-CDWEEVRPD---VVILGKALGGGVIPVSAVLADK-------- 309 (474)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhh-HHhcCCCCC---EEEecccccCCCCcceeeeecH--------
Confidence 766 499999999999999999999998766654222 111111112 3347899987779999999875
Q ss_pred hHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEE
Q 038416 245 GFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPC-ITCPVKPQGAMFVMV 318 (387)
Q Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~~~~~~~~g~~~~~ 318 (387)
++.+.+..... .+++.+++.+.++.+.|+...+..+. +...++.+.+++.|++ ++. +..+ .+ .|.++.+
T Consensus 310 ~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~---~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg-~G~~~~i 384 (474)
T PLN02624 310 DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLA---ERSAKLGQELRDQLQKIQKQFPKLIKEV-RG-RGLLNAV 384 (474)
T ss_pred HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHHhCCCceEEE-Ee-eEEEEEE
Confidence 56665543322 34567888888888888754332222 2333333333333333 332 2211 23 3445555
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.... +.....++...+ .++||.+.|+. .+++||++ ..+++++++++++|.++++...
T Consensus 385 ~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 385 VLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred EecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 5543110 001234566655 67799998863 57899997 5689999999999999887644
No 241
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=8.1e-21 Score=177.68 Aligned_cols=329 Identities=18% Similarity=0.172 Sum_probs=204.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.+.....+.. ...+.+..+++.+.+..+. ...+.+++++++++|++.+++... ....+|+..
T Consensus 57 ~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~ 133 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAF 133 (421)
T ss_pred CCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEE
Confidence 57789999999988632212211 1123344555555443221 124689999999999999998753 223678889
Q ss_pred CCCCcchHHHhhccC-CCce-------------eeeeccCCCCC---ccCChhhHHHhhc----cCceEEEEeCC-CCCc
Q 038416 104 RPGYPLYEIHAAGSN-NNLE-------------ARHYDLLPEKR---WEVDLDGVEALAD----ENTVAIVIINP-GNPC 161 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~---~~~~~~~l~~~~~----~~~~~v~l~~p-~npt 161 (387)
..+|++....+. . .+.. +..++.+.... ...+++.+++.+. +...+.++..| ++..
T Consensus 134 ~~~yHG~t~~~~--s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~ 211 (421)
T PRK06777 134 GGAFHGRTLLTM--ALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEG 211 (421)
T ss_pred cCCcCCccHHHH--hhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCC
Confidence 999988754443 2 1210 11111111100 0113556777664 23334455555 7778
Q ss_pred cc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 162 GN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 162 G~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
|. .+|++.+++|.++|++||+++|+||+|.++.+.|..+ ....++.... +.+++|.++ +|+|+||+++++
T Consensus 212 G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~-~~~~~~~~pD---iv~~sK~l~-~G~pigav~~~~---- 282 (421)
T PRK06777 212 GFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLF-AMEYYDVKPD---LITMAKSLG-GGMPISAVVGRA---- 282 (421)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchh-hhhhcCCCCC---EEeeehhhc-CCCceEEEEEcH----
Confidence 86 5788999999999999999999999999987766422 2222332222 337999987 899999999976
Q ss_pred ccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEE
Q 038416 241 LQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQGAMF 315 (387)
Q Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~ 315 (387)
++.+.+.... ..+++.+++.+.++.+.|+...+ ++..++++++.+++.+.|++ .|.+..+ .+.+.++
T Consensus 283 ----~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~ 354 (421)
T PRK06777 283 ----EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMV 354 (421)
T ss_pred ----HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEE
Confidence 6766665432 24667899999999998875333 23445555566666666654 3433322 4554444
Q ss_pred EEEecCcccccCCCcHHHHH---HHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFC---LKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~---~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~ 381 (387)
.+.+..+. .+. +..++. ...+.++||.+.|+..|+ +++|+.+ ..+++++++++++|.+++.
T Consensus 355 -~i~~~~~~-~~~-~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 355 -AVEFNDPQ-TGK-PSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred -EEEEecCc-cCC-ccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 44443210 000 112222 222456799999976553 6899999 4689999999999988874
No 242
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.90 E-value=7.4e-21 Score=177.89 Aligned_cols=315 Identities=14% Similarity=0.142 Sum_probs=203.0
Q ss_pred CcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC---------
Q 038416 26 DSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------- 95 (387)
.+|.+.+++++++..... ..........+|.+.+++++ ..+.++++++|++|++.+++.+..
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~ 125 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIP 125 (401)
T ss_pred CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCC
Confidence 479999999998875221 11001122345555555554 236899999999999999998521
Q ss_pred C-CCeEEEcCCCCcch-HHHhhccCCCc------------eeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCC
Q 038416 96 P-GANILIPRPGYPLY-EIHAAGSNNNL------------EARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPG 158 (387)
Q Consensus 96 ~-g~~vl~~~p~~~~~-~~~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~ 158 (387)
. .+.|+....+|++. ...+. ..+. ++..++. .|+++++++++ ++..+|++..++
T Consensus 126 ~~~~~i~~~~~~yhg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~avi~E~v~ 196 (401)
T TIGR01885 126 ENQAIIVSAKGNFHGRTLGAIS--MSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDHGPNVCAFIVEPIQ 196 (401)
T ss_pred CCCCEEEEECCCcCcccHHHHh--CcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhcCCCEEEEEEeCcc
Confidence 2 35777888888753 33333 2221 1122211 16788888774 344566666668
Q ss_pred CCccccCCHH-HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 159 NPCGNVFSYQ-HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 159 nptG~~~~~~-~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
+++|...+++ .+++|.++|++||+++|+||+|.++.+.|.... +........++ +++|.++.+++|+|++++++
T Consensus 197 ~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~-~~~~~~~~di~---~~gK~l~~g~~~ig~v~~~~- 271 (401)
T TIGR01885 197 GEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLC-VDHENVKPDIV---LLGKALSGGVYPVSAVLADD- 271 (401)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhH-HhhcCCCCCEE---EeeccccCCCCCcEEEEEcH-
Confidence 9999988644 699999999999999999999988766664322 11111112233 46799877669999999875
Q ss_pred CCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEE
Q 038416 238 NGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPV-KPQGAMF 315 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~ 315 (387)
++++.+... ...+++.+++.+.++.++|+...++. ..++.+++.+++++.|++++ ..++. .+..|.+
T Consensus 272 -------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~ 340 (401)
T TIGR01885 272 -------DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLL 340 (401)
T ss_pred -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCee
Confidence 677766542 22345667888888888887543333 33556666788888888763 22111 1223545
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
..+.++.... + ....++...+ .++||.+.|+. .+.+|+++ ..+++++++++++|.+++
T Consensus 341 ~~i~~~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 341 NAIVIDESKT-G-RTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred EEEEeccCcc-h-hHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 5544543210 0 1245666666 56799998853 57899998 468999999999998775
No 243
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.90 E-value=1.1e-20 Score=172.59 Aligned_cols=291 Identities=20% Similarity=0.216 Sum_probs=194.9
Q ss_pred CCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCC
Q 038416 44 NCYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNN 119 (387)
Q Consensus 44 ~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~ 119 (387)
..|+. .+....|++.++++. ..+.++++++|+.|+..++.+++++||+|+++...|.+....+. ....
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~ 118 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRF 118 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHT
T ss_pred cceeccccccHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhccc
Confidence 34544 345577888888876 34789999999999999999999999999999999998765555 2247
Q ss_pred CceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC-cEEeecccccccccCCC
Q 038416 120 NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG-IIVIADEVYNHLAFGST 198 (387)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~-~~li~D~~~~~~~~~~~ 198 (387)
|+++..++. -|++++++++++++++|++..|.||+..+.+ +++++++|+++| +++|+|+.++...
T Consensus 119 gv~v~~~d~-------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~---- 184 (386)
T PF01053_consen 119 GVEVTFVDP-------TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPY---- 184 (386)
T ss_dssp TSEEEEEST-------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTT----
T ss_pred CcEEEEeCc-------hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeecccccee----
Confidence 888877753 3789999999999999999999999988855 999999999998 9999999998532
Q ss_pred CCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN 276 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 276 (387)
...++. +..+ +++.|.+|.++..+ .=.|.+++++ ++++.++++.... .+...++...+.+..-++.
T Consensus 185 ~~~pL~-~GaD---ivv~S~TKyl~Ghsdv~~G~vv~~~------~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-- 252 (386)
T PF01053_consen 185 NQNPLE-LGAD---IVVHSATKYLSGHSDVMGGAVVVNG------SSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-- 252 (386)
T ss_dssp TC-GGG-GT-S---EEEEETTTTTTTSSSE-EEEEEESS------HHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT--
T ss_pred eeccCc-CCce---EEEeeccccccCCcceeeEEEEECc------hhhhhhhhcchhhhcCccchHHHHHHHhcCCCc--
Confidence 112222 2233 89999999975444 3356666543 1256666665543 4556666666666555554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 277 EAFFAKIIGLLKETADICYERIKEIPCITCPVKP----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
+.-+.++..++++.+.+.|++.|.+..+.+| ..|.++.+.+.. ..+.+..++.
T Consensus 253 ---l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~--------~~~~~~~f~~ 321 (386)
T PF01053_consen 253 ---LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG--------GEEAARRFLD 321 (386)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS--------HHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc--------chhhhHhHHh
Confidence 7788899999999999999998776655555 233466666753 2223333333
Q ss_pred hcCeEEE---cCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 341 EESVIIL---PGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 341 ~~gi~v~---~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.-.+... -|... +. ++.+|+|++. |+.+.+++.|.++++
T Consensus 322 ~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 322 ALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE 386 (386)
T ss_dssp H-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred hhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence 3333211 11110 00 3579999998 778888888888774
No 244
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=5.1e-21 Score=179.56 Aligned_cols=343 Identities=15% Similarity=0.055 Sum_probs=207.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+.+.+-|.+...-++ .+|.+.+++.+++.... ..+.......+|.+.+++.+ . ..+.+++++|+++|++.
T Consensus 51 ~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA~e~ 121 (426)
T PRK00062 51 EYIDYVGSWGPMILGH-AHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEATMS 121 (426)
T ss_pred EEEEcccchhhhhcCC-CCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHHHHH
Confidence 4555555544233233 78899999999998643 22333333445555555443 1 35689999999999999
Q ss_pred HHHhhcC--CCCeEEEcCCCCcchHHHhhccCC--------Ccee---eeeccCC--CCCccCChhhHHHhhcc---Cce
Q 038416 89 SLSVLAR--PGANILIPRPGYPLYEIHAAGSNN--------NLEA---RHYDLLP--EKRWEVDLDGVEALADE---NTV 150 (387)
Q Consensus 89 ~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~~~--------g~~~---~~~~~~~--~~~~~~~~~~l~~~~~~---~~~ 150 (387)
+++.... .+++|+..+++|+++...+. .. +... ...+..+ ..-..-|++.+++.++. ++.
T Consensus 122 Aik~a~~~~g~~~ii~~~~~yHG~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~a 199 (426)
T PRK00062 122 AIRLARGYTGRDKIIKFEGCYHGHADSLL--VKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIA 199 (426)
T ss_pred HHHHHHHHhCCCeEEEEcCccCCchhhhh--hccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEE
Confidence 9998542 25789999999998753332 11 1000 0000000 00001267888887743 344
Q ss_pred EEEEeCCCCCccccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce
Q 038416 151 AIVIINPGNPCGNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL 229 (387)
Q Consensus 151 ~v~l~~p~nptG~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~ 229 (387)
+|++......+|...+ .+++++|.++|++||+++|+||+|.++..++..........++ +.+++|.++ +|+++
T Consensus 200 aiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD-----i~~~gK~l~-~G~p~ 273 (426)
T PRK00062 200 AVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD-----LTTLGKIIG-GGLPV 273 (426)
T ss_pred EEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc-----hHhhhhHhh-CCCcc
Confidence 5555434556888765 7789999999999999999999999874422111111112122 468999986 78999
Q ss_pred EEEEeeCCCCcccchhHHHHHHhh---hh-ccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKGC---LN-AASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
|++++++ ++.+.+... .. .+++.+++.++++.+.|+...+ +..++..+.....++.+.+..++++ +
T Consensus 274 ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~ 344 (426)
T PRK00062 274 GAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG-I 344 (426)
T ss_pred eeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 9998875 677777422 12 3456788888888888775433 2334444444444444444444453 3
Q ss_pred CCCCCCCceEEEEEecCccccc--------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSMLE--------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
... ....|.++-+.+...... +......+...+ .++||.+.|.. .+.+++++..++++++++++.|
T Consensus 345 ~~~-vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l 418 (426)
T PRK00062 345 PLT-VNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM-LDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAA 418 (426)
T ss_pred ceE-EEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH-HHCCeEeecCC----cCceeeeccCCHHHHHHHHHHH
Confidence 311 223354555554321100 000113455554 56799998753 2457788888999999999999
Q ss_pred HHHHHHh
Q 038416 377 KAFCQRH 383 (387)
Q Consensus 377 ~~~~~~~ 383 (387)
.++++++
T Consensus 419 ~~~l~~~ 425 (426)
T PRK00062 419 RKAFAAL 425 (426)
T ss_pred HHHHHhh
Confidence 9998764
No 245
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=4.6e-20 Score=172.31 Aligned_cols=324 Identities=15% Similarity=0.058 Sum_probs=197.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHH----HHHHHHhhcCCCCCCCCCE-EEcCChHHHHHHHHHhh
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARR----GIADYLNRDLPYKLSPEDV-YLTLGCSQAIEISLSVL 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~----~ia~~~~~~~~~~~~~~~i-~~~~g~~~a~~~~~~~l 93 (387)
.++|.+++++...+.+....+++ ......+|++ .++++++ .+.+ +.++||+.|+..++.++
T Consensus 39 ~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~alv~~~SG~~A~~~~l~al 110 (416)
T PRK13034 39 FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYANVQPHSGSQANGAVYLAL 110 (416)
T ss_pred CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCceEEecCCcHHHHHHHHHHh
Confidence 36999999999986332111111 1234567777 7777772 2355 45688899999999999
Q ss_pred cCCCCeEEEcCCCCcch-HHHhhccCCCcee--eeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHH
Q 038416 94 ARPGANILIPRPGYPLY-EIHAAGSNNNLEA--RHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~-~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+++||+|+++..+|.+. ...++.+..+... ..++.++. ++.+|++++++.++. ++++|++..+. .|... +
T Consensus 111 ~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~---d 184 (416)
T PRK13034 111 LKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLIIAGFSA--YPREL---D 184 (416)
T ss_pred cCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEEECCCc--ccccc---C
Confidence 99999999999999773 2222200112211 23333222 346899999988743 57777765554 35554 4
Q ss_pred HHHHHHHHHhcCcEEeecccccccccC-CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFG-STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+.+|.++|+++|+++|+|++|+...+. |....++ . .-.++++|++|+++ |...|++++++ +++.+
T Consensus 185 l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~---~--~~Di~~~s~~K~l~--g~~GG~v~~~~-------~~~~~ 250 (416)
T PRK13034 185 FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF---P--HAHVVTTTTHKTLR--GPRGGMILTND-------EEIAK 250 (416)
T ss_pred HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC---C--CceEEEEeCcccCC--CCCCeEEEECc-------HHHHH
Confidence 888888899999999999999864432 2111122 1 13488999999963 22247777654 13444
Q ss_pred HHHhhhhcc--CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 249 SIKGCLNAA--SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 249 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
.++.....+ ..+.++...++...+....+....+..+++.++.+++++.|+++ |+.+.........+.+.+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~-- 327 (416)
T PRK13034 251 KINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG-- 327 (416)
T ss_pred HHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC--
Confidence 444322211 12333333333323332211223456788999999999999888 7774321134556666664321
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCC------ccCCCCeEEEEee------CChHhHHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGR------TVGMKNWLRIAFA------AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~------~~~~~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~ 382 (387)
.........+++.||.+.+-. ....+..+|++++ .++++++++++.|.+++.+
T Consensus 328 ---~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 328 ---LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred ---CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 133444445577899987521 1112457999972 3689999999999988764
No 246
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=6.3e-20 Score=169.79 Aligned_cols=313 Identities=17% Similarity=0.205 Sum_probs=195.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
..+.-.+++.+.+..... |+. ..+++.+++++.+.+ +.+++++++|+++|+..++.++ +++||+|+++.
T Consensus 9 ~~~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~----g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~ 78 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRF----GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPS 78 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHh----CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECC
Confidence 344557778887765432 222 244455555444433 3368999999999999887766 68999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
|+|..+...+. ..|.+++.+++++ +++.+|++++++++++++++|++++ ++|...+ +++|.++|+++|+++
T Consensus 79 ~t~~~~~~~~~--~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~~~i~v 149 (375)
T PRK11706 79 YTFVSTANAFV--LRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKKHNLFV 149 (375)
T ss_pred CCcHHHHHHHH--HcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHHcCCEE
Confidence 99999999999 9999999998864 3467899999999988899988764 5887754 788999999999999
Q ss_pred eecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc----
Q 038416 185 IADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA---- 257 (387)
Q Consensus 185 i~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~---- 257 (387)
|+|++|+.+. +.+.+. ..+. .+.+.||+ |.++ +|.+.++++.++ ++.++++..+..+
T Consensus 150 IeD~a~a~g~~~~~~~~---g~~~----~~~~~Sf~~~K~l~-~g~gG~~~~~~~--------~~~~~~~~~~~~g~~~~ 213 (375)
T PRK11706 150 VEDAAQGVMSTYKGRAL---GTIG----HIGCFSFHETKNYT-AGEGGALLINDP--------ALIERAEIIREKGTNRS 213 (375)
T ss_pred EEECccccccccCCeee---ecCc----CEEEEeCCCCcccc-ccCCeEEEECCH--------HHHHHHHHHHHcCCCcc
Confidence 9999999755 333322 2221 14445655 9864 466655555433 5666665543211
Q ss_pred --------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCCCCCc----eEEE
Q 038416 258 --------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC---ITCPVKPQG----AMFV 316 (387)
Q Consensus 258 --------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~----g~~~ 316 (387)
.+.+.......+++.. ..-..+++..++.+++.+.+.+.|.++++ +.....+.+ ..++
T Consensus 214 ~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
T PRK11706 214 QFFRGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMF 292 (375)
T ss_pred hhhccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEE
Confidence 0111111111111111 11133566666677777777788877652 331212221 2244
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc----------C-----C-------CCeEEEEe--eCChHhHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV----------G-----M-------KNWLRIAF--AAEPATLEDG 372 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----------~-----~-------~~~~Ri~~--~~~~e~~~~~ 372 (387)
++.++.. .+..++...| +++||.+...... + . ...+-+-+ ..++++++..
T Consensus 293 ~~~~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i 366 (375)
T PRK11706 293 YIKLRDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTV 366 (375)
T ss_pred EEEECCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHH
Confidence 5555421 1345666655 6679987533200 0 0 12233333 2478899999
Q ss_pred HHHHHHHH
Q 038416 373 LERIKAFC 380 (387)
Q Consensus 373 ~~~l~~~~ 380 (387)
++.|++++
T Consensus 367 ~~~i~~~~ 374 (375)
T PRK11706 367 IDTILEFF 374 (375)
T ss_pred HHHHHHHh
Confidence 88887754
No 247
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=7.6e-21 Score=158.80 Aligned_cols=325 Identities=16% Similarity=0.168 Sum_probs=214.9
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-C
Q 038416 17 RPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-R 95 (387)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~ 95 (387)
+.+++.-.-++++++++|.++...+.. |+......+|++.+|+++ .++.-++++++|.++.++++.-+ +
T Consensus 25 DLRSDTvT~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~--------GKEAgLFv~SGTmgNllaIm~Hc~~ 94 (384)
T KOG1368|consen 25 DLRSDTVTVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELF--------GKEAGLFVPSGTMGNLLAIMVHCHQ 94 (384)
T ss_pred ccccccccCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHh--------CccceeeecccccccHHHHHHHhcC
Confidence 555565566889999999999988766 555557799999999998 34555566666667777776655 6
Q ss_pred CCCeEEEcCCCCc-chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--------CceEEEEeCCCCCcc-ccC
Q 038416 96 PGANILIPRPGYP-LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--------NTVAIVIINPGNPCG-NVF 165 (387)
Q Consensus 96 ~g~~vl~~~p~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~nptG-~~~ 165 (387)
+|..|++.+.+|. .|.....-...| +...++.++++..+++++++++++. -|++|.+.|-+|.+| .++
T Consensus 95 rg~eii~gd~~HI~~~E~gg~s~l~g--v~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vl 172 (384)
T KOG1368|consen 95 RGSEIIVGDRAHIHRYEQGGISQLAG--VHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVL 172 (384)
T ss_pred CCceEEeccchheeehhccChhhhcc--ceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEe
Confidence 8999999988885 333222200233 4444555677778999999999863 378999999976555 999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc--cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA--FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
|.+++.++.++|+++|+.++.|.+--.-. -.|. ++..+......+.+. +||.+|.| +|.++....
T Consensus 173 Ple~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsiC-LSKglgAP---VGSViVG~k------ 239 (384)
T KOG1368|consen 173 PLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSIC-LSKGLGAP---VGSVIVGSK------ 239 (384)
T ss_pred eHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhhh-hhccCCCC---cccEEEccH------
Confidence 99999999999999999999998866311 1122 222222212224444 89987555 676655431
Q ss_pred hhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEEecC
Q 038416 244 SGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-QGAMFVMVKLN 321 (387)
Q Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~~~~~~~~ 321 (387)
+++++.+..+ ..+++.-..+..++++.+.- ++.... .+.-.+++..+.+.++..+++.+- .| ...+++.+.+.
T Consensus 240 -~FI~kA~~~RKalGGGmRQsGvLaaaaLval--~~~~~~-L~~dHk~A~~lAe~~~~~~~i~v~-v~a~etNiv~~~l~ 314 (384)
T KOG1368|consen 240 -DFIDKARHFRKALGGGMRQSGVLAAAALVAL--DENVPL-LRADHKRAKELAEYINTPEEIRVE-VPAVETNIVNMVLC 314 (384)
T ss_pred -HHHHHHHHHHHHhcCchhHHHHHHHHHHHHh--hcchHH-HHHHHHHHHHHHHHhccccceeee-cchhhcceeeeecc
Confidence 6777776554 34444444444444443332 122232 222233455555666666667733 44 56777776665
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
.+++ +..++...+ ++.||.+.+|. ...+||.+. .++++++.++..+.+.+
T Consensus 315 q~~~----~~~~l~~~~-~k~gi~lm~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 315 QARL----TAEELCKFL-EKNGILLMGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred cccC----CHHHHHHHH-HHCCeEEeecc----ccceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 5443 566777766 77899999985 355899995 48999999999985433
No 248
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=6.2e-20 Score=172.22 Aligned_cols=332 Identities=16% Similarity=0.134 Sum_probs=201.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.... +++......+.+.++++.+.+..+ ..-+.++++++|++|++.+++... ....+|+..
T Consensus 58 ~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~ 133 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSY 133 (443)
T ss_pred CCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 58889999999987632 222222223445566666654332 223589999999999999998753 223678888
Q ss_pred CCCCcchHHHhhccCCCc------------eeeeeccCCCC--Ccc--------CChhhHHHhhc-----cCceEEEEeC
Q 038416 104 RPGYPLYEIHAAGSNNNL------------EARHYDLLPEK--RWE--------VDLDGVEALAD-----ENTVAIVIIN 156 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--~~~--------~~~~~l~~~~~-----~~~~~v~l~~ 156 (387)
..+|++....+. +..+. .+..++.+... .+. -+++.+++.++ +++.++++..
T Consensus 134 ~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP 212 (443)
T PRK08360 134 LRSYYGSTYGAM-SLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEP 212 (443)
T ss_pred eCCcCCcCHHHH-HhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECC
Confidence 888887643222 01111 12222221100 000 12344555553 2344454443
Q ss_pred CCCCccccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 157 PGNPCGNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 157 p~nptG~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
.+||+|..++ .+.++++.++|++||+++|+||+|.++.+.|..+.. ..++...++ .++||.++ +|+|+|+++++
T Consensus 213 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~-~~~~~~pDi---itlsK~l~-~G~pigav~~~ 287 (443)
T PRK08360 213 IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAI-EHFGVEPDI---ITLGKPLG-GGLPISATIGR 287 (443)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhh-hhcCCCCCE---EEeccccc-CCceeEEEEEc
Confidence 3799999876 557999999999999999999999998776643221 112222223 26799987 88999999997
Q ss_pred CCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCC
Q 038416 236 DPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKP 310 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~ 310 (387)
+ ++.+.+.... ..+.+.+++.+.++.+.|+...+.. ..++++++.+++++.|++ .|.+.. ..
T Consensus 288 ~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~--vr 354 (443)
T PRK08360 288 A--------EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGD--VR 354 (443)
T ss_pred H--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeee--ee
Confidence 5 6777775442 3456778888888888887643322 233444444444444433 432221 22
Q ss_pred CceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 311 QGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 311 ~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.-|.++-+.+.... .+.......+... +.++|+.+.+.. .+.+|+++ .+++++++++++++.++++++.+
T Consensus 355 g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 355 GIGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ccceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34556665553211 1111112344444 466799886532 47899977 46899999999999999987653
No 249
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=4.9e-20 Score=173.59 Aligned_cols=335 Identities=17% Similarity=0.116 Sum_probs=202.6
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.......... -..+....+++.+.+..+ -..+.++++++|++|++.+++... ....+|+..
T Consensus 60 ~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~ 135 (433)
T PRK08117 60 RHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEITP--GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISF 135 (433)
T ss_pred CCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 67889999999887531111110 112334444444443321 234689999999999999998743 123678888
Q ss_pred CCCCcchHHHhhccCCC--c-----------eeeeeccCCCC--Ccc--------CChhhHHHhhc----cCceEEEEeC
Q 038416 104 RPGYPLYEIHAAGSNNN--L-----------EARHYDLLPEK--RWE--------VDLDGVEALAD----ENTVAIVIIN 156 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g--~-----------~~~~~~~~~~~--~~~--------~~~~~l~~~~~----~~~~~v~l~~ 156 (387)
..+|++...... +..+ . .+..+|.+... ... -+++.+++.++ .+..+.++..
T Consensus 136 ~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~E 214 (433)
T PRK08117 136 TGCFHGRTLGAL-SVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIE 214 (433)
T ss_pred CCCcCCcCHHHH-hhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEEC
Confidence 888887543321 0111 0 11222221100 000 13455666553 2344556666
Q ss_pred C-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 157 P-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 157 p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
| +...|.. .+++.++++.++|++||+++|+||+|.+|...|..... ..++. ...+.+++|.++ +|+++|++++
T Consensus 215 pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv---~pDi~t~sK~lg-~G~pigav~~ 289 (433)
T PRK08117 215 PVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGV---VPDIMTIAKGIA-SGLPLSAVVA 289 (433)
T ss_pred CeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCC---CCCEeehhhhcc-CCCcceeEEE
Confidence 6 5666775 57788999999999999999999999998766653321 12221 123568999986 7899999998
Q ss_pred eCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCC
Q 038416 235 SDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVK 309 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~ 309 (387)
++ ++.+.+.... ..+++.+++++.++.+.|+...+.. ..++++++.+++++.|++ ++.+. ..
T Consensus 290 ~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~--~v 356 (433)
T PRK08117 290 SK--------ELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEK---LLDNANEMGAYALERLEVLKEKHPVIG--DV 356 (433)
T ss_pred cH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCcee--ee
Confidence 75 6766664332 2456778889998888887543322 333444444555555544 33222 13
Q ss_pred CCceEEEEEecCcccc-cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhhc
Q 038416 310 PQGAMFVMVKLNVSML-EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+..|.++.+.+..... +.. .....+...+.++||.+.+... ..+.+|+++ .++++++++++++|.++++++.+|
T Consensus 357 rg~Gl~~gi~~~~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~ 433 (433)
T PRK08117 357 RGIGLMIGIEIVDPDGEPDG-DAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEALTEYEAK 433 (433)
T ss_pred ecCCcEEEEEEecCCCCcch-HHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4456666666643210 000 1123333445677998876321 247899996 578999999999999999887654
No 250
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.88 E-value=4.3e-20 Score=171.56 Aligned_cols=340 Identities=15% Similarity=0.034 Sum_probs=221.5
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChHHHHHHHHHhhcC------
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCSQAIEISLSVLAR------ 95 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~~------ 95 (387)
.++.|.+.+.+...+... ..++.......++++.+.+|+.+.++.+-..+++.. |+|+|+++..++.+...
T Consensus 51 t~~~p~~~~~~~~~l~~~-~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 51 TWMEPEARKLMDETINKN-MIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 356777899998888643 222222233447777777777776664311134544 89999999998866431
Q ss_pred --CC-----CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 96 --PG-----ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 96 --~g-----~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
.| ..|+++...|.++...++ ..|+++..+++++ +++.+|+++|++++++++.+|+++..+|.||.+.|
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~--~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp-- 204 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEKFAR--YFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED-- 204 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHHHHH--HcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC--
Confidence 11 378999999999999999 8999999999865 34578999999999999999999999999999977
Q ss_pred HHHHHHHHHHhc------CcEEeeccccccccc---CCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 169 HLQKIARTARNL------GIIVIADEVYNHLAF---GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 169 ~~~~l~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
+++|+++|+++ |+++++|.+|+++.. .+.....+. ...-..+..|.+|++ .....+|+++.+++..
T Consensus 205 -i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~ 279 (431)
T TIGR01788 205 -VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKYG-LVYPGVGWVIWRDEEA 279 (431)
T ss_pred -HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhcc-CCCCCcEEEEEeChHH
Confidence 88888888899 999999999996431 122111221 111124567899984 3334489999876321
Q ss_pred cccchhHHHHHHh---hh-----hccCCcchHH--HHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 240 ILQNSGFVDSIKG---CL-----NAASHPVTFI--QAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 240 ~~~~~~~~~~~~~---~~-----~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
+.+.+.. +. ..+...+... ....-..|.......+.++.++..++++++.+.|+++|+++++..
T Consensus 280 ------l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~ 353 (431)
T TIGR01788 280 ------LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISD 353 (431)
T ss_pred ------cchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeC
Confidence 1111110 10 0011111111 111222233344577888999999999999999999988886633
Q ss_pred -CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc---cCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 310 -PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT---VGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 310 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
|..+ .+.+++......+ .+..++.+.| .++|+.+..-.. .....++|+++ ..+.+.++..++.|++++..+
T Consensus 354 ~~~~~-iV~Fr~~~~~~~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 354 GSGIP-LVAFKLKDDADPG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCce-EEEEEeCCCCCCC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 3433 4444554211001 1344555555 667986533221 11234689998 457889999999999988765
No 251
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=6.8e-20 Score=171.19 Aligned_cols=348 Identities=16% Similarity=0.109 Sum_probs=208.2
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~ 86 (387)
.+++..-|..... ++ .+|.+.+++++++..... +.......+.+..+++.+.+..+ .. .+.+++++++++|+
T Consensus 41 ~ylD~~~g~~~~~--lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~~v~f~~SGseA~ 114 (425)
T PRK07495 41 RYIDFAAGIAVVN--TGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVP--GDFAKKTIFVTTGAEAV 114 (425)
T ss_pred EEEEccccHHhhc--cCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchHHHH
Confidence 4555544432122 23 678899999999875321 11111112334445555544322 11 25899999999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccCC----hhhHHHhhc-
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEVD----LDGVEALAD- 146 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~----~~~l~~~~~- 146 (387)
+.+++... ....+|+....+|++...... +..+. .+..+|.+... .+.+ ++++++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~ 192 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGM-SLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKA 192 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHh-hhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHh
Confidence 99998753 223689999999988643322 01110 12223332111 1122 344566553
Q ss_pred ---cCceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccc
Q 038416 147 ---ENTVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKR 221 (387)
Q Consensus 147 ---~~~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~ 221 (387)
++..+.++..| +..+|. .+|++.+++|.++|++||+++|+||++.++...|..+ .+ ...+....+.+++|.
T Consensus 193 ~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~---~~~gv~pDi~tlsK~ 268 (425)
T PRK07495 193 DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AM---EHHEVAADLTTMAKG 268 (425)
T ss_pred ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-ee---cccCCCCCEEeehhh
Confidence 23344555556 434784 5788999999999999999999999999887666421 11 111223457789999
Q ss_pred ccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh-
Q 038416 222 WIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK- 299 (387)
Q Consensus 222 ~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~- 299 (387)
++ +|+|+|++++++ ++.+.+.... ..+++.+++.++++.+.++...+..+. ++++++.+++++.|+
T Consensus 269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~ 336 (425)
T PRK07495 269 LA-GGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLC---ERANQLGNRLKQRLAS 336 (425)
T ss_pred hc-CCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHH
Confidence 75 789999999976 5666654332 346678888888777777654333222 333333333333333
Q ss_pred ---cCCCCCCCCCCCceEEEEEecCccc--ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHH
Q 038416 300 ---EIPCITCPVKPQGAMFVMVKLNVSM--LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDG 372 (387)
Q Consensus 300 ---~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~ 372 (387)
.+|.+..+ ...|.++|+.+.... .+.. .....+...+.++|+.+.+... .++.+|+.+ ..++++++++
T Consensus 337 l~~~~~~i~~v--rG~Gl~~~iel~~~~~~~~~~-~~~~~~~~~~~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~ 411 (425)
T PRK07495 337 LRETVPEIADI--RGPGFMNAVEFNDADSGLPSA-EFANRVRLKALEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEA 411 (425)
T ss_pred HHhhCCCeeee--ecCceEEEEEEecCCCCCccH-HHHHHHHHHHHHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHH
Confidence 34433322 234889999884321 1100 1122333444667999876321 147899998 4689999999
Q ss_pred HHHHHHHHHHhhh
Q 038416 373 LERIKAFCQRHAK 385 (387)
Q Consensus 373 ~~~l~~~~~~~~~ 385 (387)
+++|.++++++..
T Consensus 412 ~~~l~~~l~~~~~ 424 (425)
T PRK07495 412 LDILEASILEASA 424 (425)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987653
No 252
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=1.1e-19 Score=171.20 Aligned_cols=332 Identities=16% Similarity=0.115 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.+.. ++.......+.+..+++.+.+..+. ...+.+++++++++|++.+++... ...++|+..
T Consensus 73 ~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~ 149 (443)
T PRK06058 73 SAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVF 149 (443)
T ss_pred CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEE
Confidence 57899999999987532 2222222345566667766554321 112578999999999999998542 223789999
Q ss_pred CCCCcchHHHhhccCC-C--------c-----eeeeeccCCCCC----ccC--------ChhhHHHhhccCceEEEEeCC
Q 038416 104 RPGYPLYEIHAAGSNN-N--------L-----EARHYDLLPEKR----WEV--------DLDGVEALADENTVAIVIINP 157 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g--------~-----~~~~~~~~~~~~----~~~--------~~~~l~~~~~~~~~~v~l~~p 157 (387)
.++|+++..... .. + . .+..++.....+ ... ..+.+++.+.++..+.++..|
T Consensus 150 ~~~yHG~t~~al--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EP 227 (443)
T PRK06058 150 DHAYHGRTNLTM--ALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEP 227 (443)
T ss_pred CCCcCcChHHHH--hhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECC
Confidence 999998764443 21 1 1 112222111000 000 122333444334455566777
Q ss_pred C-CCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 158 G-NPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 158 ~-nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
. ...|.. +|++.++++.++|++||+++|.||++.+|...|..+.. ..++....++ +++|.++ +|+++|+++++
T Consensus 228 i~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~-~~~gv~PDiv---~~gK~l~-~G~Pi~av~~~ 302 (443)
T PRK06058 228 IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFAC-EHEGIVPDLI---TTAKGIA-GGLPLSAVTGR 302 (443)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHH-HhcCCCCCEE---EEccccc-CCCccEEEEEc
Confidence 4 445665 46778999999999999999999999998766643321 1222222233 5579976 78999999997
Q ss_pred CCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCC
Q 038416 236 DPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKP 310 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~ 310 (387)
+ ++.+.+.... ..+++.++++++++.+.|+...++. ..++++++.+++.+.|++ .+.+..+ .
T Consensus 303 ~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~v--r 369 (443)
T PRK06058 303 A--------EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDD---LVARARQIEALMTDRLRALAAEDDRIGDV--R 369 (443)
T ss_pred H--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCcEEee--e
Confidence 6 6766665432 3567889999999998887643332 334444445555555554 3322212 2
Q ss_pred CceEEEEEecCcc--cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 311 QGAMFVMVKLNVS--MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 311 ~~g~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
..|.++.+.+... ..+.......+... +.++||.+.++..+ .+++|+.+ ..+++++++++++|.++++++
T Consensus 370 g~G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 370 GRGAMIAIELVKPGTTEPDAELTKALAAA-AHAAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred ccceEEEEEEecCCCCCCcHHHHHHHHHH-HHHCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 3355555555321 10000011233333 35679999886543 36899986 578999999999999998753
No 253
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=9.4e-20 Score=168.45 Aligned_cols=333 Identities=13% Similarity=0.052 Sum_probs=217.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP-- 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-- 96 (387)
-+++.+.+++...+.+....+|+ ......+++....+...+.|+ .+..+|-.-+ ++.|+.+++.++++|
T Consensus 60 ~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~S-g~~An~~v~~all~~~~ 136 (493)
T PRK13580 60 YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHS-GADANLVAFWAILAHKV 136 (493)
T ss_pred cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCC-cHHHHHHHHHHHhcccc
Confidence 47888999998888875444443 233455666666666666665 3334555444 577899999999876
Q ss_pred -----------------------------CCeEEEcCCCCcchHHH---hhccCCCceeeeeccCCCCCccCChhhHHHh
Q 038416 97 -----------------------------GANILIPRPGYPLYEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEAL 144 (387)
Q Consensus 97 -----------------------------g~~vl~~~p~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 144 (387)
||+|+...+.+++.... ..++....++..++++++ ...+|.+++++.
T Consensus 137 ~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~ 215 (493)
T PRK13580 137 ESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAAL 215 (493)
T ss_pred cCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHHH
Confidence 79999876665432111 110022245666666543 347999999999
Q ss_pred hccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCccccc
Q 038416 145 ADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 145 ~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
+++.++.|+++..+|-++ ..| +++|.++|+++|+++++|++|+...+.+.... ..... ....++++|++|++
T Consensus 216 ~~~~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~--~~~D~vtgT~hKaL- 288 (493)
T PRK13580 216 AREFKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV--PHADIVTTTTHKTL- 288 (493)
T ss_pred HhhcCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC--CCCcEEEeCChhhc-
Confidence 999999999998887644 545 88888889999999999999996555432211 00001 12238899999985
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP 302 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (387)
.|.+.|++++++ ++++.+..... ..+++.++..++....+....+....+..+++..+.+.+++.|++.
T Consensus 289 -~GP~GG~I~~~~--------~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~- 358 (493)
T PRK13580 289 -RGPRGGLVLAKK--------EYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR- 358 (493)
T ss_pred -cCCCeEEEEecH--------HHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 344458998875 67777743322 2334555555544444443322223667899999999999999988
Q ss_pred CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC------CCeEEEEeeC------ChHhHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM------KNWLRIAFAA------EPATLE 370 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~Ri~~~~------~~e~~~ 370 (387)
|+.++........+++.+.... .....+.+.|.+.||.+.+-..... ...+||++.. ++++++
T Consensus 359 G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~ 433 (493)
T PRK13580 359 GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMD 433 (493)
T ss_pred CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHH
Confidence 7774422344556677775321 1233555566888999985433221 4579999832 579999
Q ss_pred HHHHHHHHHHHHh
Q 038416 371 DGLERIKAFCQRH 383 (387)
Q Consensus 371 ~~~~~l~~~~~~~ 383 (387)
.+++.|.++++..
T Consensus 434 ~iad~l~~~l~~~ 446 (493)
T PRK13580 434 EVAELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999888653
No 254
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=1.7e-19 Score=167.54 Aligned_cols=317 Identities=16% Similarity=0.166 Sum_probs=204.6
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
.++.-.+++.+.+.... |.......++|+.++++++ .++.++++|+++|+..++.++ +++||+|+++.
T Consensus 8 ~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~ 76 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTP 76 (380)
T ss_pred CCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCC
Confidence 45566788888876543 2223456899999999993 235566778999999999998 78999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL 180 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~ 180 (387)
++|..+...+. ..|++++.++++++ ++.+|+++++++++ +++++|++++ ++|...+ +++|.++|+++
T Consensus 77 ~~~~~~~~~~~--~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~---~~~i~~l~~~~ 147 (380)
T TIGR03588 77 ITFVATANCAL--YCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD---MQAIAALAKKH 147 (380)
T ss_pred cchHHHHHHHH--HcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCC---HHHHHHHHHHc
Confidence 99999988888 89999999998653 46789999999998 6888887654 5787755 88899999999
Q ss_pred CcEEeecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc
Q 038416 181 GIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA 257 (387)
Q Consensus 181 ~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (387)
|+++|+|++++... +.+...... .+. .+.+.|++ |.++. ...|+++..+ +++.++++.....+
T Consensus 148 ~~~lI~D~a~a~g~~~~~~~~g~~-~~~----d~~~~S~~~~K~~~~--~~GG~v~~~~-------~~~~~~~~~~~~~g 213 (380)
T TIGR03588 148 GLKIIEDASHALGAEYGGKPVGNC-RYA----DATVFSFHPVKIITT--AEGGAVTTND-------EELAERMRLLRSHG 213 (380)
T ss_pred CCEEEEECCCcccCccCCEeCCCc-ccc----ceEEEecCCCCcccc--cCceEEEECC-------HHHHHHHHHHHHCC
Confidence 99999999998532 333221110 011 37777876 77543 2467777754 25666665432211
Q ss_pred CCcc---------------------hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ce
Q 038416 258 SHPV---------------------TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ---GA 313 (387)
Q Consensus 258 ~~~~---------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g 313 (387)
.... ......+.+++....-..++++.++.+++.+++.+.|.+++++.....+. ..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 293 (380)
T TIGR03588 214 ITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSA 293 (380)
T ss_pred CCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeE
Confidence 1000 00000011111100112366777777888888889998887666332221 12
Q ss_pred EEEE-EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc-----------CC----------CCeEEEEee--CChHhH
Q 038416 314 MFVM-VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV-----------GM----------KNWLRIAFA--AEPATL 369 (387)
Q Consensus 314 ~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~~Ri~~~--~~~e~~ 369 (387)
++.+ +.++.. .+ .+..++...| +++||.+...... .. ...+++.++ .+++++
T Consensus 294 ~~~~~i~~~~~--~~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv 369 (380)
T TIGR03588 294 WHLYPILLDQE--FG-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQ 369 (380)
T ss_pred EEEEEEEECCc--CC-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHH
Confidence 2222 233311 01 1345666665 6779987643211 00 145777663 588999
Q ss_pred HHHHHHHHHHH
Q 038416 370 EDGLERIKAFC 380 (387)
Q Consensus 370 ~~~~~~l~~~~ 380 (387)
+..++.|++++
T Consensus 370 ~~i~~~l~~~~ 380 (380)
T TIGR03588 370 QRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHhC
Confidence 99999988763
No 255
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.88 E-value=6.3e-20 Score=167.12 Aligned_cols=325 Identities=13% Similarity=0.024 Sum_probs=212.5
Q ss_pred CCcHHHHHHHHHHhcCC---CCCCCCCC---CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC-hHHHHHHHHHhhcCCC
Q 038416 25 SDSTVAEDAVVDALRTA---HYNCYSPT---LGVPSARRGIADYLNRDLPYKLSPEDVYLTLG-CSQAIEISLSVLARPG 97 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~---~~~~y~~~---~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~l~~~g 97 (387)
..|..|++++.+.+.+. ....+... ....++-+.+.+.++..++.+ +.++|++++| +|.++++++.++..+|
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~ 80 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEG 80 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCC
Confidence 46889999999998852 12222221 111244444444444444421 3346777655 9999999999999899
Q ss_pred CeEEEcCCCCcc--hHHHhhccCCCceeeeeccCCC--CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHH
Q 038416 98 ANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLPE--KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 98 ~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
+++++...+.++ +.+.++ ..|. +..+...+. .+..+++++++ ++++++.|.+++..+.||+..+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~--~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~------- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAK--KYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR------- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHH--HhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-------
Confidence 998887777764 467777 7888 666664322 22244555544 3567899999999999999865
Q ss_pred HHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch---hHHHHH
Q 038416 174 ARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS---GFVDSI 250 (387)
Q Consensus 174 ~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~---~~~~~~ 250 (387)
++++.+++++++|.+++. +..+..+..+ + +++.|.+|++|++| +|+++.++...-.-+| .+.+..
T Consensus 149 -~l~~~~~~l~iVDavss~----g~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~ 216 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSNI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYK 216 (349)
T ss_pred -eecccCCCeEEEEccccc----cCccCCHHHc---c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHH
Confidence 455578999999999985 2233333332 2 88999999998777 7888887521100000 111111
Q ss_pred --HhhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC--ceEEEEEecCccc
Q 038416 251 --KGCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVK-PQ--GAMFVMVKLNVSM 324 (387)
Q Consensus 251 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~--~g~~~~~~~~~~~ 324 (387)
.......++++.....++.++|+...+. .++.+.++.+++++++++.|++++|+..... +. ....+.+.++..
T Consensus 217 ~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~- 295 (349)
T TIGR01364 217 IHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE- 295 (349)
T ss_pred HHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-
Confidence 0111233578888888888888876666 6999999999999999999999976642311 21 212333444421
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
....++.. .+.++|+.+.+|.. ..+.+|+|+. .+.||++.+++.|++++++
T Consensus 296 ----~~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 ----ELEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ----hHhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 01234444 44667997777654 2468999994 5799999999999987765
No 256
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.88 E-value=1.1e-19 Score=165.77 Aligned_cols=336 Identities=18% Similarity=0.138 Sum_probs=208.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.|.+|+++++..-...++.. .+.+....+++.+....+.. ..+.+++++++++|++.+++... ..+..|+.+
T Consensus 73 ~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf 149 (447)
T COG0160 73 NHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAF 149 (447)
T ss_pred CCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEE
Confidence 68999999999887632112221 22133444444444322211 45689999999999999999863 334789999
Q ss_pred CCCCcchHHHhhccCCC-------------ceeeeeccCCC--CCccC--------ChhhHHHhhc-----cCceEEEEe
Q 038416 104 RPGYPLYEIHAAGSNNN-------------LEARHYDLLPE--KRWEV--------DLDGVEALAD-----ENTVAIVII 155 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g-------------~~~~~~~~~~~--~~~~~--------~~~~l~~~~~-----~~~~~v~l~ 155 (387)
...|++...... +..+ ..++.+|.+.. ..+.. ..+.++..+. +...+.++.
T Consensus 150 ~~afHG~T~gal-slT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~ 228 (447)
T COG0160 150 DGAFHGRTLGAL-SLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIII 228 (447)
T ss_pred CCcccccchhhH-HhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEE
Confidence 999986432222 0111 12444444321 11111 2333444332 234555566
Q ss_pred CC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE
Q 038416 156 NP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
.| +...|.. .|.+.++++.++|++||+++|+||++.++...|+.+ .+...+ -..-|-+++|.++. |+++|.++
T Consensus 229 EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~f-a~E~~g---v~PDivt~aK~ig~-G~Pl~avv 303 (447)
T COG0160 229 EPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMF-AFEHFG---VEPDIVTLAKSLGG-GLPLSAVV 303 (447)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccch-hhhhcC---CCCCEEEecccccC-CCceeEEe
Confidence 66 7788886 666779999999999999999999999998887422 222222 22334478899755 99999999
Q ss_pred eeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHH-HHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 234 TSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLK-ETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
.+. ++.++.......++..++++.+++.+.|+..+++.+.++...+- ..++.+.+.-++.|.+.. ...-
T Consensus 304 ~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~Igd--VRG~ 373 (447)
T COG0160 304 GRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGD--VRGL 373 (447)
T ss_pred ccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceec--cccc
Confidence 976 56663333334568899999999999888655544444333332 333333333333554442 2344
Q ss_pred eEEEEEecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 313 AMFVMVKLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 313 g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
|.++-+.+-+... |.......++.+ +.++|+.+..++. ..+.+||.+ ..++++++.+++.|.+++++.
T Consensus 374 Glm~giE~v~d~~t~~p~~~~~~~i~~~-~~~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 374 GLMIGVELVKDRDTKEPDAELAAKIVAR-AFERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ceEEEEEEecCCCCCCCCHHHHHHHHHH-HHHcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 7777777654221 111122344444 4667988876542 257899999 568999999999999999875
No 257
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=2.3e-19 Score=167.17 Aligned_cols=229 Identities=17% Similarity=0.119 Sum_probs=160.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~ 125 (387)
.....+++.++++++ .+..++++++++|+.+++.+++++||+|+++...|.+.. ..+. ..|+++..
T Consensus 69 pt~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~--~~Gi~v~~ 138 (437)
T PRK05613 69 PTVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLN--RLGIEVTF 138 (437)
T ss_pred hHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHH--hcCeEEEE
Confidence 345778888888872 245566666668999989888999999999999998764 3446 78999888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++ ++ .|++++++++++++++|++.++.||+|.+.+ +++|.++|+++|+++|+|.+++... ...++ .
T Consensus 139 vd-~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~----~~~p~-~ 204 (437)
T PRK05613 139 VE-NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-E 204 (437)
T ss_pred EC-CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc----ccChH-H
Confidence 86 22 2789999999999999999999999998877 8888999999999999999987422 12222 2
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeCCCCccc----------------------------chhHHHHHH-hh-hh
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ----------------------------NSGFVDSIK-GC-LN 255 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~----------------------------~~~~~~~~~-~~-~~ 255 (387)
+.. .+++.|++|.++..|.-+|.+++.+....+. ..++..+.+ .. ..
T Consensus 205 ~Ga---Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (437)
T PRK05613 205 LGA---DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRD 281 (437)
T ss_pred hCC---CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHh
Confidence 223 3889999999877665556655532110000 000111111 11 23
Q ss_pred ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 256 AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
.+...+++..+.+..-|+. +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus 282 ~G~~~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yP 331 (437)
T PRK05613 282 TGATLSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVAKVNFA 331 (437)
T ss_pred cCCCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcceEECC
Confidence 4566677766666555554 7778889999999999999998776544443
No 258
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=5.6e-20 Score=172.65 Aligned_cols=346 Identities=16% Similarity=0.145 Sum_probs=205.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+.++.-|.-...-.+ .+|.+.+++++++.......+.. -..+.+..+++.+.+..+ ...+.++++++|++|++.
T Consensus 43 ~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~ 117 (423)
T PRK05964 43 ELIDAISSWWVATHGH-NHPYIDQAIREQLDRLDHVIFAG--FTHEPAERLAQRLVALTP--GGLDHVFFSDSGSVAVEV 117 (423)
T ss_pred EEEEcchhHHhccCCC-CCHHHHHHHHHHHhhCCCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHH
Confidence 4555544432222222 46899999999987632111111 112444555665554332 124689999999999999
Q ss_pred HHHhhcC-------CC-CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCCccCChhhHHHhhcc-
Q 038416 89 SLSVLAR-------PG-ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 89 ~~~~l~~-------~g-~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~- 147 (387)
+++.... +| .+|+....+|++...... +..+- .+..++.+..+....+++.+++.+..
T Consensus 118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~ 196 (423)
T PRK05964 118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTM-SVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH 196 (423)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHH-hcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC
Confidence 9987531 23 689999999987654333 01111 11222221111001126777777742
Q ss_pred -CceEEEEeCC--CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc
Q 038416 148 -NTVAIVIINP--GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 148 -~~~~v~l~~p--~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
+..+.++..| ++.+|..+ +.++++++.++|++||+++|+||++.++...|..+. ...++.. ..+.+++|+++
T Consensus 197 ~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a-~~~~~v~---pDi~~~~K~l~ 272 (423)
T PRK05964 197 AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFA-CEQAGVS---PDIMCLSKGLT 272 (423)
T ss_pred CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhH-HHhcCCC---CCeeeeehhhh
Confidence 2333445555 66778765 888899999999999999999999998766553221 1112111 22347889976
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhh-------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGC-------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYE 296 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (387)
.+++++|++++++ ++.+.+... ...+++.++++..++.+.++...++ ...+++.++.+.+++
T Consensus 273 gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~ 341 (423)
T PRK05964 273 GGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE---PVLERVAALSAGLAE 341 (423)
T ss_pred cCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 5558999998865 677766431 1233457888888887777743221 233444444555555
Q ss_pred HhhcCCCCCCCC-CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHH
Q 038416 297 RIKEIPCITCPV-KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGL 373 (387)
Q Consensus 297 ~l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~ 373 (387)
.|+++.....+. ....|.++.+.+..... . .....+...+ .++||.+.+. .+.+|+++. +++++++.++
T Consensus 342 ~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~-----~~~lR~~p~l~~t~edId~~v 413 (423)
T PRK05964 342 GLEPFRDLPGVADVRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPL-----GNTIYLMPPYIITAEELDRIT 413 (423)
T ss_pred HHHhhccCCCeEEeecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEec-----CCEEEEeCCcccCHHHHHHHH
Confidence 554432222111 12345566666643100 0 0123455554 6679999874 357999985 7899999999
Q ss_pred HHHHHHHHHh
Q 038416 374 ERIKAFCQRH 383 (387)
Q Consensus 374 ~~l~~~~~~~ 383 (387)
+.++++++++
T Consensus 414 ~~l~~al~~~ 423 (423)
T PRK05964 414 DAIVEVADEL 423 (423)
T ss_pred HHHHHHHhhC
Confidence 9999998764
No 259
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.88 E-value=1.8e-19 Score=168.09 Aligned_cols=331 Identities=14% Similarity=0.077 Sum_probs=195.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCC-CCCCEEE-cCChHHHHHHHHHhhc--CCCCeEE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKL-SPEDVYL-TLGCSQAIEISLSVLA--RPGANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~-~~g~~~a~~~~~~~l~--~~g~~vl 101 (387)
.+|.+.+++++++..... ........+.+..+++.+.+....+. ..+.+++ ++++++|++.+++... ....+|+
T Consensus 52 ~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii 129 (412)
T TIGR02407 52 NNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVV 129 (412)
T ss_pred CCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEE
Confidence 688999999998874211 11111123455556665544211011 1124655 5899999999999864 2236899
Q ss_pred EcCCCCcchHHHhhccCCCc------------eeeeeccCCCCCc-cCChhhHHHhhcc-----CceEEEEeCC-CCCcc
Q 038416 102 IPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKRW-EVDLDGVEALADE-----NTVAIVIINP-GNPCG 162 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~-----~~~~v~l~~p-~nptG 162 (387)
....+|++....+. +..+. .+..+|.+..... .-+++.+++.++. ...+.++..| +++.|
T Consensus 130 ~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G 208 (412)
T TIGR02407 130 SFTNAFHGMTLGSL-SVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGG 208 (412)
T ss_pred EECCCcCCchHHHH-HhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCC
Confidence 99999998654433 01111 1122222110000 0135667777752 1223444555 78889
Q ss_pred c-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCc
Q 038416 163 N-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI 240 (387)
Q Consensus 163 ~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~ 240 (387)
. .+|.+.+++|.++|++||+++|+||++.++...|..+.. ...+.++ +.+++|.++..|+|+|++++++
T Consensus 209 ~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD-----i~~~~K~lg~~G~pigav~~~~---- 279 (412)
T TIGR02407 209 INVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD-----IVCLSKSISGYGLPLALTLIKP---- 279 (412)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC-----EEEechhccCCccceeEEEEch----
Confidence 8 578888999999999999999999999987655543221 1223333 3468899654489999999975
Q ss_pred ccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhh-ccHHHHHHHH-HHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 241 LQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDE-TNEAFFAKII-GLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++ +.+... ...+++.++++..++.+.++. ..+..+.++. +.-...++.+.+..+.++++. ...+..|.++|
T Consensus 280 ----~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~ 353 (412)
T TIGR02407 280 ----EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-KQVRGRGLMQG 353 (412)
T ss_pred ----hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-EeeecceeEEE
Confidence 33 333212 224566777776665665553 2222222222 222223333333333344333 32456788999
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
+.++... ....+...+ .++||.+.+... .++.+|+++. .++++++++++.|.+++++
T Consensus 354 l~l~~~~-----~~~~~~~~~-~~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 354 IECGDGD-----LAGKIAKAA-FENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred EEecChH-----HHHHHHHHH-HHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 9986421 123454544 567999987432 1467999994 6899999999999998863
No 260
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.87 E-value=2.7e-19 Score=167.82 Aligned_cols=347 Identities=14% Similarity=0.102 Sum_probs=203.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEE-cCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYL-TLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~-~~g~~~a~ 86 (387)
.+++..-|.......+ .+|.+.+++++++..... ........+.+..+++.+.+....+...+ .+++ +++|++|+
T Consensus 40 ~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~ 116 (425)
T PRK09264 40 EYIDFFAGAGALNYGH-NNPVLKQALIDYLQRDGI--THGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAV 116 (425)
T ss_pred EeeecccchhhccCCC-CCHHHHHHHHHHHHhccc--ccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHH
Confidence 4555544432222122 688999999998875211 11111123445555555544221111122 5656 58999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCC-C---------c---eeeeeccCCCCCc-cCChhhHHHhhcc---
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAAGSNN-N---------L---EARHYDLLPEKRW-EVDLDGVEALADE--- 147 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~-g---------~---~~~~~~~~~~~~~-~~~~~~l~~~~~~--- 147 (387)
+.+++... ....+|+....+|++...... .. + . .+..+|.+..... .-|++++++.+..
T Consensus 117 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~l--s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 117 EAALKLARKVTGRTNIVAFTNGFHGMTLGSL--AVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHhcCCCeEEEECCccCCccHHHH--HhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 99998864 223678988999988654322 11 1 0 1223332211000 0256777777742
Q ss_pred --CceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccc
Q 038416 148 --NTVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRW 222 (387)
Q Consensus 148 --~~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~ 222 (387)
...+.++..| +...|+ .+|++.+++|.++|++||+++|+||++.+++..|..+.. ...+.++ +.+++|.+
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD-----i~t~~K~l 269 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD-----IVTLSKSI 269 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC-----EEEecccc
Confidence 1234455555 666776 578889999999999999999999999987665532211 1122332 34678998
Q ss_pred cccccceEEEEeeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-
Q 038416 223 IVPGWRLGWLVTSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE- 300 (387)
Q Consensus 223 ~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 300 (387)
+..|+++|++++++ ++ ..+... ...+++.++++..++.+.+....++ .+..++++++.+++++.|++
T Consensus 270 ~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l 338 (425)
T PRK09264 270 SGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEI 338 (425)
T ss_pred CCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHH
Confidence 76699999999975 33 223221 1234566777777665666321111 12334444444455544443
Q ss_pred ---CCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHH
Q 038416 301 ---IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLER 375 (387)
Q Consensus 301 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~ 375 (387)
.|.+. ...+..|.++++.++.. .....+...+ .++||.+.+...+ ...+|+++. .+++++++++++
T Consensus 339 ~~~~~~~~-~~vrg~Gl~~~i~l~~~-----~~~~~l~~~~-~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~ 409 (425)
T PRK09264 339 AAKYPGLG-AEVRGRGMMQGIDFGDG-----ELAGKIAAEA-FENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDI 409 (425)
T ss_pred HHhCCCce-ecceecccEEEEEecCh-----HHHHHHHHHH-HHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHH
Confidence 43321 22345677888888531 1233455444 5679999875332 367888875 689999999999
Q ss_pred HHHHHHHhhh
Q 038416 376 IKAFCQRHAK 385 (387)
Q Consensus 376 l~~~~~~~~~ 385 (387)
|.++++++.+
T Consensus 410 l~~~l~~~~~ 419 (425)
T PRK09264 410 LEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 261
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.87 E-value=3.7e-20 Score=169.92 Aligned_cols=320 Identities=13% Similarity=0.063 Sum_probs=203.4
Q ss_pred CCCcHHHHHHHHHHhcCC---CCCCCCCC-------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC-hHHHHHHHHHh
Q 038416 24 LSDSTVAEDAVVDALRTA---HYNCYSPT-------LGVPSARRGIADYLNRDLPYKLSPEDVYLTLG-CSQAIEISLSV 92 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~---~~~~y~~~-------~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~ 92 (387)
.+.|+.|++++.+.+.+. ....|... ....+.|+.++++++ . .++++|++++| +|++++.++.+
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~----~-~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN----I-PDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEEcCCchHHHHHHHHh
Confidence 378999999999987421 11112211 235567777777773 1 14568988877 99999999999
Q ss_pred hcC---CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCC-hhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 93 LAR---PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVD-LDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 93 l~~---~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+.. +|+.|++ .+....+.+.++ ..|.++..++.+...++ .+ ++..+..+++++++|.+++..|.||+.++
T Consensus 83 l~~~~~~~~~i~~-g~~~~~~~~~a~--~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-- 156 (355)
T cd00611 83 LLGDKGTADYVVT-GAWSAKAAKEAK--RYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-- 156 (355)
T ss_pred cCCCCCeEEEEEC-CHHHHHHHHHHH--hcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--
Confidence 987 4455544 222223344667 78988888876432222 13 33333446778999999999999999843
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch---h
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS---G 245 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~---~ 245 (387)
++++.+|+++++|.+++. |..+..+..++ +.+.|.+|.+|++| +|++++++...-.-.| .
T Consensus 157 ------~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~ 219 (355)
T cd00611 157 ------EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPS 219 (355)
T ss_pred ------eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECHHHHhhcccCCCC
Confidence 233458999999999985 32333333332 45566899988777 7888887521100001 1
Q ss_pred HHHHHH--hhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCC--CceEEEEEe
Q 038416 246 FVDSIK--GCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCIT-CPVKP--QGAMFVMVK 319 (387)
Q Consensus 246 ~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~--~~g~~~~~~ 319 (387)
..+... ......++++.....++.++++...+. .++.+.++.+++++++++.|+++||+. ....+ ..+..+.+.
T Consensus 220 ~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~ 299 (355)
T cd00611 220 MLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFR 299 (355)
T ss_pred cccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEE
Confidence 111000 111124577777888888888876666 689999999999999999999997753 12111 122223334
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
++.. ....++... +.+.|+.+.+|.. ..+.+|+|++ ++.+|++++++.|+++
T Consensus 300 ~~~~-----~l~~~~~~~-~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 300 LGKE-----ELEKEFLKE-AEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cCCh-----hhhHHHHHH-HHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4321 012333333 4567998655543 2478999995 4899999999998874
No 262
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=4.8e-19 Score=164.24 Aligned_cols=337 Identities=12% Similarity=0.095 Sum_probs=212.0
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++-|.-..+-.+. +|.+.+++++++.+... .+. ....+++..+++++.+.. ..+.+++++|+++|++
T Consensus 36 ~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~-~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e 107 (395)
T PRK03715 36 KRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLIN-PSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANE 107 (395)
T ss_pred CEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccc-ccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHH
Confidence 345555444332333444 69999999999875321 111 234577888898886532 2468999999999999
Q ss_pred HHHHhhcC------CC-CeEEEcCCCCcchHHHhhccCCCceee---eeccCCCCC--ccCChhhHHHhhccCceEEEEe
Q 038416 88 ISLSVLAR------PG-ANILIPRPGYPLYEIHAAGSNNNLEAR---HYDLLPEKR--WEVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 88 ~~~~~l~~------~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~---~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~l~ 155 (387)
.+++.... +| ++|++.+.+|++...... +..+.... ..|..+.-. ...|++++++.+++++.+|++.
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~E 186 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATM-SASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLE 186 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHH-hhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEe
Confidence 99998751 23 678888888887643333 02232211 111111000 0136888998887677777766
Q ss_pred CCCCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEE
Q 038416 156 NPGNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
..++..|... |++.++++.++|++||+++|+||++.++...|..+.. .....+| +.+++|.++ .|+++|.++
T Consensus 187 pv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD-----i~t~gK~lg-~G~p~~av~ 260 (395)
T PRK03715 187 PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD-----IMTLGKGIG-GGVPLAALL 260 (395)
T ss_pred CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc-----eeeehhhhh-CCcceEEEE
Confidence 6677788874 6888999999999999999999999987666653321 1122222 457889975 568999999
Q ss_pred eeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI---PCITCPVKP 310 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~ 310 (387)
+++ ++..........+++.++...+++.+.|+...+ ++..++++++.+++++.|+++ .++.. ..
T Consensus 261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~--vr 327 (395)
T PRK03715 261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEG--ER 327 (395)
T ss_pred Ecc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCe--EE
Confidence 876 333111111123456678888877777765332 234455555556666666543 12331 23
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhc---CeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE---SVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
..|.++-+.+.. +....+...+.+. |+.+.+.. .+.+|+++. .++++++++++.|+++++++
T Consensus 328 G~Glm~~i~l~~-------~~~~~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 328 GEGLLRALLLGK-------DIGPQIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cceeEEEEEecC-------chHHHHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 446666666643 1112222333445 99886532 478999994 68999999999999998764
No 263
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.87 E-value=4.9e-19 Score=159.53 Aligned_cols=286 Identities=18% Similarity=0.163 Sum_probs=201.4
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHY 126 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~ 126 (387)
.+....|++.++++- ..++.+.+++|+.|+..++.+++++||+|+++...|.+....+. +...|+++.++
T Consensus 62 nPT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 62 NPTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred CccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 456788888888876 56789999999999999999999999999999999988655544 22677777776
Q ss_pred ccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 127 DLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
+. .+.+++++++. +++++|++..|+||+..+.+ +.+|+++|+++|+.+|+|+.++.-.+. .|+ .
T Consensus 134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q----~PL-~ 198 (396)
T COG0626 134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ----RPL-E 198 (396)
T ss_pred CC-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc----Chh-h
Confidence 42 24556666666 59999999999999988854 999999999999999999999863322 122 1
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh-h-hccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC-L-NAASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
+..+ +++.|.+|.++..+ .=.|.+++++ +++.+.+... . .....++++..+.+..-++. +.-
T Consensus 199 ~GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT-----L~~ 263 (396)
T COG0626 199 LGAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT-----LAL 263 (396)
T ss_pred cCCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch-----HHH
Confidence 2233 99999999986544 4455455443 2455554332 2 25566777777666655554 777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEE
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (387)
+.+++.+++..+.+.|++.|.+..+.+|. .|-++.+.+.. . +.+.++++.-.+..
T Consensus 264 Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~--------~-~~~~~f~~~L~l~~ 334 (396)
T COG0626 264 RMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN--------E-EAAKKFLDSLKLFK 334 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC--------h-HHHHHHHHhCCccE
Confidence 88999999999999999988877776774 45555666652 1 33333333333222
Q ss_pred ---EcCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 347 ---LPGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 347 ---~~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+-|+... . ++-+|+|++. |+++.+++.|+++++..
T Consensus 335 ~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 335 LAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAKA 395 (396)
T ss_pred EeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHhh
Confidence 2221110 0 3679999998 77777888888887654
No 264
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=3.2e-19 Score=168.72 Aligned_cols=329 Identities=12% Similarity=0.055 Sum_probs=203.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHH----HHHHHHHHHhhcCCCCCCCCCEEEc---CChHHHHHHHHH
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPS----ARRGIADYLNRDLPYKLSPEDVYLT---LGCSQAIEISLS 91 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~----lr~~ia~~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~ 91 (387)
.++|.+++++...+.+....+++. ...... .|+.+++++ +.+++++.++ +|+++++..++.
T Consensus 45 ~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~~~~~~~~sgt~an~~v~~ 118 (452)
T PTZ00094 45 FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEWGVNVQPYSGSPANFAVYT 118 (452)
T ss_pred cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccceeecCCCchHHHHHHHHH
Confidence 578889999999887532212221 111222 344566666 3466676566 789999999999
Q ss_pred hhcCCCCeEEEcCCCCcchHHHhhc--------cCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCcc
Q 038416 92 VLARPGANILIPRPGYPLYEIHAAG--------SNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCG 162 (387)
Q Consensus 92 ~l~~~g~~vl~~~p~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG 162 (387)
++.++||+|++....|.+....... ...+.++..++++. ++.+|+++++++++. +++++++. ++.+|
T Consensus 119 al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l~~~~~~lvi~~--~s~~g 194 (452)
T PTZ00094 119 ALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELAKAFRPKLIIAG--ASAYP 194 (452)
T ss_pred HhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHHHHhCCCEEEEe--CCCCC
Confidence 9999999999988777664332210 00112334444443 357899999999854 56666543 33588
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC-ccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY-VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
...| +++|.++|+++|+++++|++|+......... .++. ...++++|.+|+++ |.+.|++++++.. .
T Consensus 195 ~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~--GP~Gg~l~~~~~~--~ 262 (452)
T PTZ00094 195 RDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR--GPRSGLIFYRKKV--K 262 (452)
T ss_pred CccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC--CCCceEEEEeccc--c
Confidence 8877 7788888999999999999999644332211 1221 22388999999853 3334888876411 0
Q ss_pred cchhHHHHHHhhh--hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEe
Q 038416 242 QNSGFVDSIKGCL--NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 242 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~ 319 (387)
+.+...+.... .+.++++.....++..+++.......++..+++.++++++.+.|++. ++.+...........+.
T Consensus 263 --~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~ 339 (452)
T PTZ00094 263 --PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVD 339 (452)
T ss_pred --hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeec
Confidence 01111221111 11235566666677777765434456677888999999999999876 66643211112234444
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEE-cCCccC----CCCeEEEEee--C----ChHhHHHHHHHHHHHHHHh
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIIL-PGRTVG----MKNWLRIAFA--A----EPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~----~~~~~Ri~~~--~----~~e~~~~~~~~l~~~~~~~ 383 (387)
+..... +.. .+..+++++||.+. ++..+. .++++|++++ + +++|++++++.|.++++..
T Consensus 340 ~~~~~~----~~~-~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 340 LRPFGI----TGS-KMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred CCcCCC----CHH-HHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 443211 333 44445577899995 333322 1478999993 2 4899999999999988753
No 265
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.87 E-value=2.4e-19 Score=164.21 Aligned_cols=323 Identities=14% Similarity=0.063 Sum_probs=210.2
Q ss_pred CCCcHHHHHHHHHHhcCC---C-----CCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEE-EcCChHHHHHHHHHh
Q 038416 24 LSDSTVAEDAVVDALRTA---H-----YNCYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVY-LTLGCSQAIEISLSV 92 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~---~-----~~~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~-~~~g~~~a~~~~~~~ 92 (387)
-+.|+.|++++.+.+.+. . .+++.+. .-+.+.++.+++++ +.+ +..+++ ++++++.++++++..
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence 368999999999986421 1 1122220 22344455555555 321 233454 557789999999999
Q ss_pred hcCCCCeEEEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHH-hhccCceEEEEeCCCCCccccCCHHH
Q 038416 93 LARPGANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA-LADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 93 l~~~g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++.+|+++++...+.++ +.+.++ ..|.. ..+...+..+. .+..++++ .+++++++|.+++..+.||+..+ +
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~--~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~ 160 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAK--KYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--E 160 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHH--HhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--c
Confidence 99999988887766654 456777 77854 55554332332 34444444 77778999999999999999974 2
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch---hH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS---GF 246 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~---~~ 246 (387)
+.++ +|+++|+|.+++. +..+..+..+ + +++.|.+|.+|++| +|++++++...-.-+| ..
T Consensus 161 i~~i------~g~l~vVDavss~----g~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~ 223 (360)
T PRK05355 161 LPDT------GDVPLVADMSSDI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSM 223 (360)
T ss_pred cccc------CCCcEEEEcCccc----cCccCCHHHc---c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChH
Confidence 5555 7999999999985 2233333332 2 88899999998777 7888887622100001 11
Q ss_pred HHHHH--hhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEEEEEecC
Q 038416 247 VDSIK--GCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKP--QGAMFVMVKLN 321 (387)
Q Consensus 247 ~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~g~~~~~~~~ 321 (387)
.+... ......++++.....++.++|+...+. .++.+.++.++.++++++.|++++.+.....+ .....+.+.++
T Consensus 224 ~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~ 303 (360)
T PRK05355 224 LDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLA 303 (360)
T ss_pred HHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcC
Confidence 11111 111234678888888998888876666 69999999999999999999998632222111 12223444444
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
.. ....++...+ .++|+.+.+|.. ..+.+|+|+. ++.+|++++++.|+++++.
T Consensus 304 ~~-----~~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 304 DE-----ELDKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred Ch-----HHHHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 31 1223444444 567999866542 3478999994 5799999999999998765
No 266
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.87 E-value=1.9e-19 Score=151.33 Aligned_cols=351 Identities=16% Similarity=0.166 Sum_probs=242.6
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE--EcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVY--LTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~--~~~g~~~ 84 (387)
++.+..+|--+.+..-| ..|.|+++-.....+... ..|-+..|.+.+++..++.+-.......+.++++ =+-|||.
T Consensus 31 ~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTG 110 (410)
T KOG1412|consen 31 VKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTG 110 (410)
T ss_pred ceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccc
Confidence 45556666544444444 445555555554444322 4677778999999999998854333334455554 3567888
Q ss_pred HHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCC-ceeeeeccCCCCCccCChhhHHHhhccC--ceEEEEeCC-C
Q 038416 85 AIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNN-LEARHYDLLPEKRWEVDLDGVEALADEN--TVAIVIINP-G 158 (387)
Q Consensus 85 a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~l~~p-~ 158 (387)
|+.+....|. -....|.+..|+|.+...... ..| ..+..++....+...+|++.+...++.- ..++++..+ +
T Consensus 111 Al~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~--~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAh 188 (410)
T KOG1412|consen 111 ALRIAADFLATFYNKNTVYVSNPTWENHHAIFE--KAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAH 188 (410)
T ss_pred hhhhhHHHHHHhcccceeEecCCchhHHHHHHH--HcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeecccc
Confidence 9998888874 234679999999999988888 899 4577777776667788999988877542 344455544 9
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc--ccccCCC-ccEEEEecCcccccccccceEEEEee
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP--MGVFGSI-VPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~--~~~~~~~-~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
||||.-++.+++++|+++.++.+.+.+.|-+|++|.-++..... ++.+... ..++++.||+|.||+-+-|+|.+..-
T Consensus 189 NPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv 268 (410)
T KOG1412|consen 189 NPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVV 268 (410)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEE
Confidence 99999999999999999999999999999999998754432222 1222222 34799999999999999999986543
Q ss_pred CCCCcccchhHHHHHHh----h-hhccCCcchHHHHHHHHHhhhcc--HHH---HHHHHHHHHHHHHHHHHHhhcC--C-
Q 038416 236 DPNGILQNSGFVDSIKG----C-LNAASHPVTFIQAAVPRIVDETN--EAF---FAKIIGLLKETADICYERIKEI--P- 302 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~--~~~---~~~~~~~~~~~~~~~~~~l~~~--~- 302 (387)
- ++|..+..+.. . +...+.|+..+..++.+.|+..+ ++| +..+..++.+.|..+++.|..+ |
T Consensus 269 ~-----~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPG 343 (410)
T KOG1412|consen 269 V-----NNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPG 343 (410)
T ss_pred e-----cChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 2 23334444433 2 22456788888889999988754 233 3444455556666666666554 2
Q ss_pred CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~~ 381 (387)
.|..+ ..+.|+|-+..+. ...++.|.+++.|.+.+.+ ||++ +.+...++...++|.++++
T Consensus 344 tWDHI-~~QiGMFSyTGLt----------p~qV~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAIde~Vr 404 (410)
T KOG1412|consen 344 TWDHI-TQQIGMFSYTGLT----------PAQVDHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAIDETVR 404 (410)
T ss_pred cHHHH-HhhccceeecCCC----------HHHHHHHHHhceEEEecCC--------cEeeeccccccHHHHHHHHHHHHH
Confidence 24433 4567888775553 3566778888899888744 8999 5788888888888888888
Q ss_pred Hhhh
Q 038416 382 RHAK 385 (387)
Q Consensus 382 ~~~~ 385 (387)
....
T Consensus 405 ~~~~ 408 (410)
T KOG1412|consen 405 AIKS 408 (410)
T ss_pred hhcc
Confidence 7643
No 267
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=166.99 Aligned_cols=316 Identities=16% Similarity=0.093 Sum_probs=202.1
Q ss_pred CCcHH-HHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcC-ChHHHHHHHHHhhcCC-CCe
Q 038416 25 SDSTV-AEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVYLTL-GCSQAIEISLSVLARP-GAN 99 (387)
Q Consensus 25 ~~~~~-v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l~~~-g~~ 99 (387)
++++. +++++.+..... .++++ ..-..+.|+.++++++ . .++++|++++ |+|.+++.++.++.++ ++.
T Consensus 22 ~~~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~~----~-~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~ 94 (378)
T PRK03080 22 KKRPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELLS----L-PEGYEVGIVPGSDTGAWEMALWSLLGARRVD 94 (378)
T ss_pred CCChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEECCchHHHHHHHHHhcCCCCcce
Confidence 46667 999988654421 13332 2334566666776662 1 1345788775 8999999999999874 444
Q ss_pred EEEcCCCCcc-hHH-HhhccCCCc-eeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 100 ILIPRPGYPL-YEI-HAAGSNNNL-EARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 100 vl~~~p~~~~-~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
|+. .-.|.. +.. ..+ ..|. ++..++.+ .+..+|+++++ . ++.|.+++.+|.||+..| +++|++
T Consensus 95 vi~-~g~f~~~~~~~~~~--~~g~~~v~~~~~~--~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~p---i~~I~~- 160 (378)
T PRK03080 95 HLA-WESFGSKWATDVVK--QLKLEDPRVLEAD--YGSLPDLSAVD----F-DRDVVFTWNGTTTGVRVP---VARWIG- 160 (378)
T ss_pred EEE-eCHHHHHHHHHHHh--hcCCCCceEeccC--CCCCCCHhhcC----C-CCCEEEEecCCccceecc---chhhcc-
Confidence 544 334433 333 235 6788 88888763 33456666533 2 567889999999999988 566666
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHh---
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKG--- 252 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~--- 252 (387)
+++|+++|+|.+++. |..+..+... .+++.|.+|+++. +| +|+++.++ +.++++..
T Consensus 161 -~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~--------~~~~~~~p~~~ 220 (378)
T PRK03080 161 -ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP--------RAVERLESYTP 220 (378)
T ss_pred -ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH--------HHHHhhhcccC
Confidence 788999999999985 2223333332 3889999999753 56 78888875 33333221
Q ss_pred -------------------hh--hccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-
Q 038416 253 -------------------CL--NAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVK- 309 (387)
Q Consensus 253 -------------------~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 309 (387)
.. ....+++.....++..+|+...+. .++.+.++.+++.+++++.+++++++.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~ 300 (378)
T PRK03080 221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVAD 300 (378)
T ss_pred CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCC
Confidence 00 112344555555556666655554 6788889999999999999998866553311
Q ss_pred CC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 310 PQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 310 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+. ++..+.+.++... + . ...++...++++ |+.+..|......+.+|+|++ .++++++.+++.|++++++++.
T Consensus 301 ~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 301 PATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred ccccCccEEEEEcCCch-H-H-HHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 21 2223444444200 0 0 123455556544 888877653323578999994 6899999999999999887654
No 268
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.9e-19 Score=154.26 Aligned_cols=297 Identities=18% Similarity=0.138 Sum_probs=200.0
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHY 126 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~ 126 (387)
.+....|+++||.+-+ .-..+.+++++.|+..++..++++||+|+....-|.+....+. +...|+++..+
T Consensus 61 NPT~~vlE~RiAaLEG--------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv 132 (426)
T COG2873 61 NPTTDVLEERIAALEG--------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV 132 (426)
T ss_pred CchHHHHHHHHHHhhc--------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence 4577899999998763 2345667788999999999999999999999888876544333 12789998887
Q ss_pred ccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc
Q 038416 127 DLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF 206 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 206 (387)
+. .|+++++++++++||+|++..-.||.+.+++ +++++++|+++++++|+|..++.-. -..|+. .
T Consensus 133 d~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy----l~rP~~-h 197 (426)
T COG2873 133 DP-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY----LCRPIE-H 197 (426)
T ss_pred CC-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce----ecchhh-c
Confidence 53 3799999999999999999999999999966 8999999999999999999988521 112221 1
Q ss_pred CCCccEEEEecCcccccccccceEEEEeeCCCCccc-------------------------chhHHHHHHhh--hhccCC
Q 038416 207 GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ-------------------------NSGFVDSIKGC--LNAASH 259 (387)
Q Consensus 207 ~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~-------------------------~~~~~~~~~~~--~~~~~~ 259 (387)
+-.++++|.+|+.|..|.-+|-++.+.....+. ++.++-+.+.. +..+.+
T Consensus 198 ---GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~ 274 (426)
T COG2873 198 ---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGAT 274 (426)
T ss_pred ---CCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccc
Confidence 223899999999999999999988865332111 01111122211 223444
Q ss_pred cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEEecCc
Q 038416 260 PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-----------------GAMFVMVKLNV 322 (387)
Q Consensus 260 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~g~~~~~~~~~ 322 (387)
.+|+....+..-++ -+.-+.++..+|+..+.+-|++.|.+..+.+|. .|-.+.+.+..
T Consensus 275 lsPfnAfl~lqGlE-----TL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kg 349 (426)
T COG2873 275 LSPFNAFLLLQGLE-----TLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKG 349 (426)
T ss_pred cCcHHHHHHHhchh-----hhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecC
Confidence 55554444444333 377788999999999999999988776555542 23333433332
Q ss_pred ccccCCCcHHHHHHHH-----HHhc----CeEEEcCCccCC-------------CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKL-----AKEE----SVIILPGRTVGM-------------KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~l-----l~~~----gi~v~~g~~~~~-------------~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
. ......+++.| +.+- -+.+-|.+.-+. ++.+|+|+++ |+++.++..|++++
T Consensus 350 g----~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl 423 (426)
T COG2873 350 G----YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQAL 423 (426)
T ss_pred h----HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHH
Confidence 1 01122333332 0111 122224322211 4689999999 78888888888877
Q ss_pred HH
Q 038416 381 QR 382 (387)
Q Consensus 381 ~~ 382 (387)
++
T Consensus 424 ~~ 425 (426)
T COG2873 424 EA 425 (426)
T ss_pred hc
Confidence 64
No 269
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=3.8e-19 Score=178.59 Aligned_cols=302 Identities=14% Similarity=0.067 Sum_probs=202.4
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCC--CEEEcCChHHHHHHHHHhh-cCCCCeEEEcCCCCcchH---HHhhccCCCceee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPE--DVYLTLGCSQAIEISLSVL-ARPGANILIPRPGYPLYE---IHAAGSNNNLEAR 124 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~p~~~~~~---~~~~~~~~g~~~~ 124 (387)
...+.|+.+++++ +++++ .|++|+|+|++++.++.++ .++||+|++..-.|.+.. ..++ ..|+++.
T Consensus 79 ~~e~aR~~ia~~l------ga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~--~~G~~v~ 150 (805)
T PLN02724 79 TIESARQQVLEYF------NAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYAL--EKGAAAI 150 (805)
T ss_pred HHHHHHHHHHHHh------CCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHH--HcCCeEE
Confidence 3567788888888 34444 5899999999999999998 578999999877776543 3444 5788998
Q ss_pred eeccCCC------CCccCCh--hhHHHhh----------ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc-----C
Q 038416 125 HYDLLPE------KRWEVDL--DGVEALA----------DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL-----G 181 (387)
Q Consensus 125 ~~~~~~~------~~~~~~~--~~l~~~~----------~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~-----~ 181 (387)
.++++.. ....+++ +++++.+ .+++++|.+++.+|-||..+|.+.+.++.+.++.+ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 8887521 1112332 5566543 24568999999999999999976554444433322 3
Q ss_pred cEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhh-------
Q 038416 182 IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGC------- 253 (387)
Q Consensus 182 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------- 253 (387)
+++++|.+++. ++.+..+..++.+ +++.|++|++| ..| +|++++++. +.+.+...
T Consensus 231 ~~v~vDaaQ~~----g~~piDv~~~~~D---fl~~S~HK~~GgP~G--~G~L~vr~~--------~~~~l~p~~~GGg~~ 293 (805)
T PLN02724 231 WMVLLDAAKGC----GTSPPDLSRYPAD---FVVVSFYKIFGYPTG--LGALLVRRD--------AAKLLKKKYFGGGTV 293 (805)
T ss_pred eEEEeehhhhc----CCCCCChhhcCCC---EEEEecceeccCCCC--ceEEEEehh--------hhhhhcCCccCCCce
Confidence 68999999985 4444455555555 89999999987 445 788888752 22222110
Q ss_pred ------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC------CCCCCCC
Q 038416 254 ------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP------CITCPVK 309 (387)
Q Consensus 254 ------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~ 309 (387)
+.-.++++..+..++.++++...+-.++++.++...+.+++.+.|++++ ++.+. .
T Consensus 294 ~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy-g 372 (805)
T PLN02724 294 AASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY-G 372 (805)
T ss_pred EEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc-C
Confidence 0113466677777777777765555677888888899999999998875 35433 2
Q ss_pred CC--------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---------------------------
Q 038416 310 PQ--------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------------------------- 354 (387)
Q Consensus 310 ~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------------------------- 354 (387)
+. -+..+.+.+.... +..-....+..++..+||.++.|..|..
T Consensus 373 ~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~ 450 (805)
T PLN02724 373 NHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDD 450 (805)
T ss_pred CCCCCCCcccccCEEEEEEEcCC--CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCch
Confidence 21 1223333332211 0001123455677788999999877641
Q ss_pred --------CCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 355 --------KNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 355 --------~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
.+.+|+|++ .+.+|++++++.|++..
T Consensus 451 ~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 451 QDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred hheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 267999995 58999999999998865
No 270
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.86 E-value=8.6e-19 Score=156.89 Aligned_cols=341 Identities=15% Similarity=0.094 Sum_probs=222.5
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+.|++.+.++--..... .+|.|.+|+++++++.. .|+.+ .+++-.+|+.+.++.+ ..+.|-+++++|+|.
T Consensus 52 Gn~YIDy~~~~Gp~ilGH-~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAt 122 (432)
T COG0001 52 GNEYIDYVLGWGPLILGH-AHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEAT 122 (432)
T ss_pred CCEeeehhccCcccccCC-CCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHH
Confidence 346677666653233222 56679999999999874 35443 2566677777766443 448999999999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCC--ce-----------------eeeeccCCCCCccCChhhHHHhh
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNN--LE-----------------ARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g--~~-----------------~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
..+++... ...|+|+.++-||++..+.+.. ..| .. +..+|. + |++++++++
T Consensus 123 msAiRlARa~TgR~kIikF~G~YHG~~D~~lv-~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y---N----D~~al~~~~ 194 (432)
T COG0001 123 MSAIRLARAYTGRDKIIKFEGCYHGHSDSLLV-KAGSGAATLGSPSSPGVPADVAKHTLVLPY---N----DLEALEEAF 194 (432)
T ss_pred HHHHHHHHHhhCCCeEEEEcCCCCCCccHHHh-hcCcCcccCCCCCCCCCChhhhccEEEecC---C----CHHHHHHHH
Confidence 99998864 2348999999999986655441 111 11 111121 1 789999988
Q ss_pred ccC--ceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccc
Q 038416 146 DEN--TVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKR 221 (387)
Q Consensus 146 ~~~--~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~ 221 (387)
++. ..+.+|+.| ....|. .+.+++++.|.++|+++|+++|.||+..+|...-.+......+.+| +.++.|.
T Consensus 195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi 269 (432)
T COG0001 195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI 269 (432)
T ss_pred HHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh
Confidence 764 455577777 333555 5666679999999999999999999999887652233333344444 6688999
Q ss_pred ccccccceEEEEeeCCCCcccchhHHHHHHhh----hhccCCcchHHHHHHHHHhhhccH--HHHHHHHHHHHHHHHHHH
Q 038416 222 WIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC----LNAASHPVTFIQAAVPRIVDETNE--AFFAKIIGLLKETADICY 295 (387)
Q Consensus 222 ~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 295 (387)
...|+++|.+-+++ ++.+.+... ...+.+.++.+..+..+.++...+ ...++..+.-.+.++-+.
T Consensus 270 -IGGGlP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~ 340 (432)
T COG0001 270 -IGGGLPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLR 340 (432)
T ss_pred -hcCCcceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 57899999999876 777766432 235667888888888888876443 234445555555555555
Q ss_pred HHhhcCCCCCCCCCCCceEEEEEecCcccccCCC--------cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChH
Q 038416 296 ERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG--------DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPA 367 (387)
Q Consensus 296 ~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e 367 (387)
+.+++. ++.......+++| -+.|.......+. ....+...++ ++||.+.|+.+ ...=+|..++++
T Consensus 341 ~~~~~~-g~~~~v~~~gsm~-~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ahte~ 413 (432)
T COG0001 341 AAAERH-GIPLTVNRVGSMF-GIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAHTEE 413 (432)
T ss_pred HHHHHh-CCCeEEeeecceE-EEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeecccCHH
Confidence 666655 5553323333333 3333321111111 1124555554 55999998642 334577788999
Q ss_pred hHHHHHHHHHHHHHHhhh
Q 038416 368 TLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~ 385 (387)
+|++.++.+.++++++.+
T Consensus 414 di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 414 DIDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999887654
No 271
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=2.6e-18 Score=153.98 Aligned_cols=318 Identities=19% Similarity=0.199 Sum_probs=212.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
....-.+++.+.+..+.... ++ -..++++.+++|+ ...+.+.++++|.|+.+++++| +++||.|+++.
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 56788889999998765533 33 4579999999999 5578999999999999999976 59999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
-+|......+. ..|++++.++++++ .+.+|++.+|+++.++||+|+.++- -|... ++.+|.++|++||++|
T Consensus 82 ~TfvATan~i~--~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~---dm~~i~~la~~~~l~v 152 (374)
T COG0399 82 FTFVATANAVL--LVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPC---DMDAIMALAKRHGLPV 152 (374)
T ss_pred CchHHHHHHHH--HcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCC---CHHHHHHHHHHcCCeE
Confidence 99999998989 99999999999764 4679999999999999999997764 45553 4889999999999999
Q ss_pred eecccccccc-cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcc--
Q 038416 185 IADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPV-- 261 (387)
Q Consensus 185 i~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 261 (387)
|+|.+++... |.|+....+.. +.+.||.-.-.++..-.|.+++++ +++.++++..+..+....
T Consensus 153 IEDaAqa~Ga~y~gk~vGt~Gd-------~~~fSF~~~K~ittgEGGav~tnd-------~ela~k~~~lr~hG~~~~~~ 218 (374)
T COG0399 153 IEDAAQAHGATYKGKKVGSFGD-------IGAFSFHATKNLTTGEGGAVVTND-------EELAEKARSLRNHGLSRDAV 218 (374)
T ss_pred EEEcchhccCeecCcccccccc-------eEEEEecCCCCccccCceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence 9999999533 55553333322 445566533333333557777765 578888877654322210
Q ss_pred ----------hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE----EecCcccccC
Q 038416 262 ----------TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM----VKLNVSMLED 327 (387)
Q Consensus 262 ----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~ 327 (387)
+.-..-+.+++....-+.++++.++-++..+...+.|++++++.....+......| +.++..
T Consensus 219 ~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~---- 294 (374)
T COG0399 219 FKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE---- 294 (374)
T ss_pred ccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC----
Confidence 00011111111111224567777777778888888888887666443343322222 223321
Q ss_pred CCcHHHHHHHHHHhcCeE----EEcCCcc--------C----C-------CCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVI----ILPGRTV--------G----M-------KNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~----v~~g~~~--------~----~-------~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
..+-..+.. .+++.||. ..|-..+ . . ...+.+-+ ..+++++++.++.|++++.+
T Consensus 295 ~~~R~~l~~-~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 295 GISRDALME-SLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCHHHHHH-HHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 012234444 45777554 3342111 0 0 13455555 45889999999999888753
No 272
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=3.1e-20 Score=166.16 Aligned_cols=225 Identities=18% Similarity=0.162 Sum_probs=155.0
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP 130 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~ 130 (387)
-..++++.+|++++ . .+.+++++|+++++..++.+++++||+|+++.++|.++...+. ..|.++++++...
T Consensus 60 ~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~--~~g~~~~~v~~~~ 130 (294)
T cd00615 60 PIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV--LSGAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH--HCCCEEEEecCcc
Confidence 46788889999883 2 2344559999999999999999999999999999999888888 8899988887654
Q ss_pred CCC----ccCChhhHHHhhc--cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc-cccCCCCCccc
Q 038416 131 EKR----WEVDLDGVEALAD--ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH-LAFGSTPYVPM 203 (387)
Q Consensus 131 ~~~----~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~ 203 (387)
..+ ..+|+++++++++ ++++++++++| |++|.+++ +++|+++|+++|+++|+|++|+. +.+.+......
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~ 206 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA 206 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence 333 3689999999985 46789999998 68999987 88999999999999999999974 33333212111
Q ss_pred cccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 204 GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
. ..+..+++.|++|+ ++|++.|+++..+.. .. ..+++..... .+.+++.....++..++.... ..-.
T Consensus 207 ~---~~~~div~~S~hK~--l~g~~~~~~l~~~~~-~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~ 275 (294)
T cd00615 207 A---MAGADIVVQSTHKT--LPALTQGSMIHVKGD-LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGK 275 (294)
T ss_pred h---hcCCcEEEEchhcc--cchHhHHHHHHhCCC-cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhH
Confidence 1 12446999999998 467766555433211 11 1223333221 234556656566655554321 1223
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 038416 282 KIIGLLKETADICYERIK 299 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~ 299 (387)
+..++..++.+.+++.|.
T Consensus 276 ~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 276 ELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 445556666666666554
No 273
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.86 E-value=4.3e-18 Score=159.42 Aligned_cols=295 Identities=16% Similarity=0.140 Sum_probs=186.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---------cCCCCeEEEcCCCCcchHHHhhccCCCce
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL---------ARPGANILIPRPGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---------~~~g~~vl~~~p~~~~~~~~~~~~~~g~~ 122 (387)
..++++.++++++ .+++++++|+++++..++.++ +++||+|+++.++|..+...+. ..|.+
T Consensus 65 ~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~--~~G~~ 134 (438)
T PRK15407 65 NDAFEKKLAEFLG--------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII--QNGLV 134 (438)
T ss_pred HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH--HcCCE
Confidence 5789999999983 357899999999999999876 3789999999999999998888 89999
Q ss_pred eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc-cCCCCCc
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA-FGSTPYV 201 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~-~~~~~~~ 201 (387)
++.+++++ .++.+|++.+++++++++++|+++++ +|.. .++++|.++|+++|++||+|++++... +.|....
T Consensus 135 pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G 207 (438)
T PRK15407 135 PVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTG 207 (438)
T ss_pred EEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCeeee
Confidence 99988764 35688999999999889999998875 4543 458999999999999999999998533 3333222
Q ss_pred cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCC----------------------
Q 038416 202 PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASH---------------------- 259 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 259 (387)
.+. + +.+.||+....+.....|++++++ +++.+.++.....+..
T Consensus 208 ---~~g-d---~~~fSf~~~k~~~~geGG~l~t~d-------~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T PRK15407 208 ---TFG-D---IATLSFYPAHHITMGEGGAVFTND-------PLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGEL 273 (438)
T ss_pred ---ccC-c---eEEEeCCCCCCccccCceEEEECC-------HHHHHHHHHHHHhCcccccccccccccccccccccccc
Confidence 222 1 556666643223323358888876 3455555443321110
Q ss_pred -------------cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCCc---eEEE-EEecC
Q 038416 260 -------------PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC-ITCPVKPQG---AMFV-MVKLN 321 (387)
Q Consensus 260 -------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~---g~~~-~~~~~ 321 (387)
..+.-..-+.+++....-..++++.++-+++++++.+.|.++++ +.....+.+ .++. .+.++
T Consensus 274 ~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 353 (438)
T PRK15407 274 PFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVK 353 (438)
T ss_pred cccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEEC
Confidence 00000000111111111234666777777777888888887764 322212222 2222 22333
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCc--cCC----------------------CCeEEEEe--eCChHhHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRT--VGM----------------------KNWLRIAF--AAEPATLEDGLER 375 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~----------------------~~~~Ri~~--~~~~e~~~~~~~~ 375 (387)
... + .+-.++...| +++||.+.+... ... ...+-+-+ ..++++++..++.
T Consensus 354 ~~~--~-~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~ 429 (438)
T PRK15407 354 EDA--G-FTRVELVKYL-EENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEK 429 (438)
T ss_pred CcC--C-CCHHHHHHHH-HHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHH
Confidence 210 1 1345666666 667997654321 000 11222222 2478999999999
Q ss_pred HHHHHH
Q 038416 376 IKAFCQ 381 (387)
Q Consensus 376 l~~~~~ 381 (387)
|+++++
T Consensus 430 i~~~~~ 435 (438)
T PRK15407 430 IEEFFG 435 (438)
T ss_pred HHHHHh
Confidence 988775
No 274
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=5.9e-18 Score=155.25 Aligned_cols=289 Identities=12% Similarity=0.067 Sum_probs=200.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCC--EEEcCChHHHHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeec
Q 038416 52 VPSARRGIADYLNRDLPYKLSPED--VYLTLGCSQAIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYD 127 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~ 127 (387)
..++++.+.+++.+.++. ++++ .++|+|+|+++..++.... .+++.|+++.-.|+++...++ .+|.+...++
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~--~lg~~~~~V~ 138 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR--LLRIKSRVIT 138 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH--HcCCCCceec
Confidence 456666666666666654 3334 4789999999887765542 467899999999999999999 8999888888
Q ss_pred cCCCCCccCChhhHHHhhccC---ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC---cEEeecccccccccCCCCC-
Q 038416 128 LLPEKRWEVDLDGVEALADEN---TVAIVIINPGNPCGNVFSYQHLQKIARTARNLG---IIVIADEVYNHLAFGSTPY- 200 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~---~~li~D~~~~~~~~~~~~~- 200 (387)
.++ ++.+|+++|+++++++ +.+|+++.++|+||.+-| +++|+++|+++| +++++|.+++.+...-...
T Consensus 139 ~~~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 139 SLP--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred cCC--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 753 4579999999999876 889999999999999966 888888999998 6999999999754321100
Q ss_pred ccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh---h---h--hccCCcchHHHHHHHHHh
Q 038416 201 VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG---C---L--NAASHPVTFIQAAVPRIV 272 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~~~~~l 272 (387)
.++ .+.. .-..+..|.+|+++ ....+|+++.++ +..+.+.. + . ...++.+.....++...|
T Consensus 214 ~~~-d~~~-~vDsis~s~HK~~~-~P~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL 282 (380)
T PRK02769 214 PPF-SFAD-GIDSIAISGHKFIG-SPMPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAI 282 (380)
T ss_pred ccC-CccC-CCCEEEECCcccCC-CCCCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHH
Confidence 011 1111 12366779999965 235589999886 23333211 1 0 112233444556666666
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc
Q 038416 273 DETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV 352 (387)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 352 (387)
.......+.+..++..++++++.+.|++. +++.+..|... .+.++.+ + .++ . +|..+.+-
T Consensus 283 ~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~-~v~f~~~--------~-~~~----~--~~w~l~~~--- 342 (380)
T PRK02769 283 RSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSI-TVVFPCP--------S-ERI----W--KKWHLATS--- 342 (380)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCce-EEEEcCC--------C-HHH----H--hCeeEccc---
Confidence 66667788999999999999999999886 77767566543 3333322 2 122 1 36555543
Q ss_pred CCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 353 GMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 353 ~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
..++||++ ..+++.++..++.|.+.++.
T Consensus 343 --~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 343 --GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 35899999 45788999999998877663
No 275
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=8.7e-19 Score=161.47 Aligned_cols=307 Identities=22% Similarity=0.288 Sum_probs=200.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcCC
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPRP 105 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~p 105 (387)
..+-.+++.+.++.+....++ ....++++.+++|+ +...++.++++|.|+.+++.++ +++||.|+++..
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~g--~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~ 73 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTYG--PYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAY 73 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSSS--HHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESS
T ss_pred CHHHHHHHHHHHHhCCccCCC--HHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCC
Confidence 355677788888776443333 35689999999999 4579999999999999999998 589999999999
Q ss_pred CCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 106 GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 106 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
+|..+...+. ..|++++.++++++ .+.+|++.+++++++++++|++++. .|.. .++.+|.++|+++|++||
T Consensus 74 t~~~~~~ai~--~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lI 144 (363)
T PF01041_consen 74 TFPATASAIL--WAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLI 144 (363)
T ss_dssp S-THHHHHHH--HTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEE
T ss_pred cchHHHHHHH--HhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEE
Confidence 9999999999 99999999999754 5689999999999999999998774 4555 359999999999999999
Q ss_pred ecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc-----
Q 038416 186 ADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA----- 257 (387)
Q Consensus 186 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~----- 257 (387)
+|.+++... +.|.. +..+. .+.+.||+ |.+ +....|.+++++ +++.++++.....+
T Consensus 145 eD~a~a~g~~~~g~~---~G~~g----d~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~ 208 (363)
T PF01041_consen 145 EDAAQAFGARYKGRP---VGSFG----DIAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRNHGRSRDA 208 (363)
T ss_dssp EE-TTTTT-EETTEE---TTSSS----SEEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTBTTEETSE
T ss_pred EccccccCceeCCEe---ccCCC----CceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhccCcCccc
Confidence 999999643 33322 22222 26677875 664 444458888865 46777777654322
Q ss_pred -------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce----E-EEEEe
Q 038416 258 -------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA----M-FVMVK 319 (387)
Q Consensus 258 -------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g----~-~~~~~ 319 (387)
+.++.+..+.+..-| ..+++..++-+++.+.+.+.|.+++++.....+... + .+.+.
T Consensus 209 ~~~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~ 283 (363)
T PF01041_consen 209 FRRYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIR 283 (363)
T ss_dssp CSTTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEE
T ss_pred cccccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccc
Confidence 112222222222223 336777777888888899999998776433222221 1 12223
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEcCCc--cC------C----------------CCeEEEEe--eCChHhHHHHH
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRT--VG------M----------------KNWLRIAF--AAEPATLEDGL 373 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~------~----------------~~~~Ri~~--~~~~e~~~~~~ 373 (387)
++.... .+-.++...| ++.||.+.+... .. . ...+-+-+ ..++++++..+
T Consensus 284 ~~~~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~ 359 (363)
T PF01041_consen 284 LPDEAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIA 359 (363)
T ss_dssp ETCCGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHH
T ss_pred cccccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHh
Confidence 332110 1334565555 677999987652 11 0 12344444 35788888888
Q ss_pred HHHH
Q 038416 374 ERIK 377 (387)
Q Consensus 374 ~~l~ 377 (387)
+.|+
T Consensus 360 ~~ir 363 (363)
T PF01041_consen 360 EAIR 363 (363)
T ss_dssp HHHH
T ss_pred hccC
Confidence 8764
No 276
>PLN02590 probable tyrosine decarboxylase
Probab=99.85 E-value=2.2e-18 Score=163.18 Aligned_cols=351 Identities=10% Similarity=0.044 Sum_probs=222.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEcCChHHHHHHHHHhhcC----
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-----PEDVYLTLGCSQAIEISLSVLAR---- 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~---- 95 (387)
+.++.+...+....-+.....|...+...++++.+.+|+.+.++.+.. ...-++++|+|+++..++.+...
T Consensus 141 ~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~ 220 (539)
T PLN02590 141 TSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILK 220 (539)
T ss_pred CcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHh
Confidence 344444444444333433445555667889999999999998886632 13457789999988887766432
Q ss_pred -------CCCeEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhccC------ceEEEEeCCCC
Q 038416 96 -------PGANILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALADEN------TVAIVIINPGN 159 (387)
Q Consensus 96 -------~g~~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~n 159 (387)
+.-.|.+++.+|+++...+. ..|+ .++.+|++..+++.+|+++|+++++.. +.+|+-+..+.
T Consensus 221 ~~g~~~~~~~vvy~S~~aH~Sv~KAa~--ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT 298 (539)
T PLN02590 221 KVGKTLLPQLVVYGSDQTHSSFRKACL--IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTT 298 (539)
T ss_pred hhcccCCCCEEEEecCCchHHHHHHHH--HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 11145568889999999999 8888 478888865456789999999998642 34556666678
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
.||.+ +++++|+++|++||+|+++|.+|+++..-...... +..++.- .=+..+++|++ .....+|.++++++.
T Consensus 299 ~tGai---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~A--DSit~D~HK~l-~~p~~cg~llvr~~~ 372 (539)
T PLN02590 299 SSAAV---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENA--DSFNMNAHKWL-FANQTCSPLWVKDRY 372 (539)
T ss_pred CCccc---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccC--CEEEECchhhc-CcCcCEEEEEecCHH
Confidence 89999 77999999999999999999999986533222211 2222211 13345799994 555889999998743
Q ss_pred Ccc----cchhHHHHH-------HhhhhccC-CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 239 GIL----QNSGFVDSI-------KGCLNAAS-HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 239 ~~~----~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
.+. .+++++..- ......+. ..-.+....+-..|+....+.+.+++++..++++++.+.+++.|++++
T Consensus 373 ~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel 452 (539)
T PLN02590 373 SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEV 452 (539)
T ss_pred HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 110 011111000 00000011 111122222333344455678999999999999999999999999997
Q ss_pred CCCCCceEEEEEecCcccccCC-Cc--HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHH
Q 038416 307 PVKPQGAMFVMVKLNVSMLEDI-GD--DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFC 380 (387)
Q Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~-~~--~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~ 380 (387)
+..|.-+ .+++++........ .+ ..++.+++.+ .|.............++|+++. +++++++.+++.|.+..
T Consensus 453 ~~~~~l~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~-~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a 530 (539)
T PLN02590 453 VTTRYFS-LVCFRLAPVDGDEDQCNERNRELLAAVNS-TGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 530 (539)
T ss_pred ecCCceE-EEEEEecCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 7555544 34445432111000 00 1244455543 4554444344444568999994 47899999999999987
Q ss_pred HHhhh
Q 038416 381 QRHAK 385 (387)
Q Consensus 381 ~~~~~ 385 (387)
+++.+
T Consensus 531 ~~~~~ 535 (539)
T PLN02590 531 SKFTR 535 (539)
T ss_pred HHhcc
Confidence 77654
No 277
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.85 E-value=3.7e-18 Score=143.76 Aligned_cols=324 Identities=13% Similarity=0.067 Sum_probs=217.6
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc
Q 038416 30 AEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL 109 (387)
Q Consensus 30 v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~ 109 (387)
+-+.++++..++...+.++ ...++-+.+.+-++..|. ...+...++..+++.++++++-.++.|||+|++...+-++
T Consensus 28 l~~~V~~A~~~~~lgh~sP--e~~qIm~~v~egikyVFk-T~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg 104 (385)
T KOG2862|consen 28 LSGRVQEAMSRPSLGHMSP--EFVQIMDEVLEGIKYVFK-TANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWG 104 (385)
T ss_pred CCHHHHHhhcCCccccCCH--HHHHHHHHHHHHHHHHhc-cCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHH
Confidence 3344445555544433332 334444444443333332 2334566777888999999999999999999987665543
Q ss_pred --hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 110 --YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 110 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.++++ ++|+++..++.+ .+..++++++.+.+.. .++++++++....||+..+. ++.+.++|++|+.++++
T Consensus 105 ~ra~D~~~--r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllV 178 (385)
T KOG2862|consen 105 QRAADCAR--RYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLV 178 (385)
T ss_pred HHHHHHHH--hhCceeeEEecC--cccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcCCeEEEE
Confidence 568888 999999999764 3457899999998865 56889999999999999543 67778899999999999
Q ss_pred cccccccccCCCCCccccccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhh----------
Q 038416 187 DEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLN---------- 255 (387)
Q Consensus 187 D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~---------- 255 (387)
|.+.+.. +. ... ++.++-.+....-.|+++. +| ++.+..++ .-.++++..++
T Consensus 179 D~VaSlg---gt-~F~---mDewgVDvaytgSQKaL~aP~G--LsiisfS~--------ka~~~~~~rK~~~~~~yFd~~ 241 (385)
T KOG2862|consen 179 DTVASLG---GT-EFE---MDEWGVDVAYTGSQKALGAPAG--LSIISFSD--------KALEAIRDRKTKPVSFYFDIL 241 (385)
T ss_pred echhhcC---Cc-cce---ehhhcccEEEecchhhcCCCCC--cceeecCH--------HHHHHHhhccCCceEEEEeHH
Confidence 9998852 22 111 2333333445556688764 45 44455554 23333332211
Q ss_pred --------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-eEEEEEec
Q 038416 256 --------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG-AMFVMVKL 320 (387)
Q Consensus 256 --------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-g~~~~~~~ 320 (387)
+..+++....+.+.++|....++.++...++++++.+.++..|+++ |++.....+. ... .+
T Consensus 242 ~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlp---tv 317 (385)
T KOG2862|consen 242 RLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLP---TV 317 (385)
T ss_pred hhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccC---cc
Confidence 1235566677778888877778999999999999999999999997 5553322221 111 11
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eC--ChHhHHHHHHHHHHHHHHh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AA--EPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~--~~e~~~~~~~~l~~~~~~~ 383 (387)
....+|...|..+++..+..++++.+..|-....+..+||++ ++ +.|.++..++.|+.++.+.
T Consensus 318 ttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 318 TTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred eeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 112233334777888888777788877776555578999999 43 5789999999998888764
No 278
>PLN02880 tyrosine decarboxylase
Probab=99.84 E-value=3.3e-18 Score=162.00 Aligned_cols=328 Identities=11% Similarity=0.040 Sum_probs=213.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-----CCEEEcCChHHHHHHHHHhhcC-----------CCCeEEEcCCC
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSP-----EDVYLTLGCSQAIEISLSVLAR-----------PGANILIPRPG 106 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~l~~-----------~g~~vl~~~p~ 106 (387)
...|...+...++++.+.+|+.+.++.+-.. ..-++|+|+|+++..++.+..+ +.-.|++++.+
T Consensus 111 ~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a 190 (490)
T PLN02880 111 GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT 190 (490)
T ss_pred CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc
Confidence 3344445567899999999999988865321 3467789999998887766432 11245578889
Q ss_pred CcchHHHhhccCCCce---eeeeccCCCCCccCChhhHHHhhccC------ceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 107 YPLYEIHAAGSNNNLE---ARHYDLLPEKRWEVDLDGVEALADEN------TVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 107 ~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
|+++...+. ..|++ ++.+|++..+++.+|++.|+++++.. +.+|+.+..+..||.+-| +++|+++|
T Consensus 191 H~Sv~Kaa~--~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~ 265 (490)
T PLN02880 191 HSALQKACQ--IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIA 265 (490)
T ss_pred hHHHHHHHH--HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHH
Confidence 999999999 89985 67788765556789999999988542 344555566789999955 89999999
Q ss_pred HhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh---
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--- 253 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--- 253 (387)
+++|+|+++|.+|+++........ .+..+. .-..+..+++|++ .....+|+++.++.. .+.+.+...
T Consensus 266 ~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie--~aDSit~d~HKwl-~~P~~~g~llvr~~~------~l~~~~~~~~~Y 336 (490)
T PLN02880 266 KSNGMWFHVDAAYAGSACICPEYRHYIDGVE--EADSFNMNAHKWF-LTNFDCSLLWVKDRN------ALIQSLSTNPEF 336 (490)
T ss_pred HHcCCEEEEehhhHHHHHhCHHHHHHhcCch--hcCEEEECchhhc-CCCccEEEEEEeCHH------HHHHHHccCHHH
Confidence 999999999999998643221111 122221 1126677899995 666889999988632 122222110
Q ss_pred hhc-----cC----------CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEE
Q 038416 254 LNA-----AS----------HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 254 ~~~-----~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~ 318 (387)
... .. ....+....+-..++....+.+.++.++..++++++.+.+++.++++++..|..+ .+.+
T Consensus 337 l~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~-iv~F 415 (490)
T PLN02880 337 LKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFS-LVCF 415 (490)
T ss_pred hcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceE-EEEE
Confidence 000 00 0011111112122444456778888888889999999999998899977555544 4455
Q ss_pred ecCcccccC-CCc--HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhhhc
Q 038416 319 KLNVSMLED-IGD--DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 319 ~~~~~~~~~-~~~--~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+++...... ..+ ..++.+++.++..+.+.+ ..+....++|+++. +++++++.+++.|.+..+++..+
T Consensus 416 r~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 416 RLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred EEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 654311100 000 123455554445555544 33444679999994 46799999999999988877654
No 279
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.84 E-value=2.3e-18 Score=153.10 Aligned_cols=218 Identities=20% Similarity=0.109 Sum_probs=161.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeec
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYD 127 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~ 127 (387)
+....|++.+++.. ....+++.++|+.|+..++..|+..|++|+.....|.+...+++ ....|++...++
T Consensus 77 Pt~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd 148 (409)
T KOG0053|consen 77 PTRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVD 148 (409)
T ss_pred CchHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeec
Confidence 45567777888776 44668999999999999999999999999999999998776665 225677766665
Q ss_pred cCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 128 LLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
+ -+++.+++++++++++|++.+|.||+..+.+ +++++++|+++|+++|+|+.++....- ....+.
T Consensus 149 ~-------~~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~-----~pL~lG 213 (409)
T KOG0053|consen 149 V-------DDLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ-----DPLPLG 213 (409)
T ss_pred h-------hhHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc-----ChhhcC
Confidence 3 2678899999999999999999999999966 888888888999999999999864211 112233
Q ss_pred CCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHH
Q 038416 208 SIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIG 285 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 285 (387)
.| +++.|.+|.++... +=.|.++.+ .+++..+++.... ..+.++++....+..-++. +.-+.+
T Consensus 214 AD---IV~hSaTKyi~Ghsdvi~G~iv~n-------~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~ 278 (409)
T KOG0053|consen 214 AD---IVVHSATKYIGGHSDVIGGSVVLN-------SEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRIN 278 (409)
T ss_pred CC---EEEEeeeeeecCCcceeeeEEecC-------cHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHH
Confidence 33 99999999986544 434555553 2368888877654 6677777776666544443 455666
Q ss_pred HHHHHHHHHHHHhhcCCCCC
Q 038416 286 LLKETADICYERIKEIPCIT 305 (387)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~ 305 (387)
+..+++..+.+.|+..|.++
T Consensus 279 ~~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 279 KHSENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHHHhhhCCcee
Confidence 66677666777777655444
No 280
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=6.9e-18 Score=153.90 Aligned_cols=339 Identities=14% Similarity=0.084 Sum_probs=216.8
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHH-HHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDA-VVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a-~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
..++++++.. |-++ ..+.++ +......+. .|..+..+.+|++.+++++ ..+.++.|++++.
T Consensus 36 ~~~v~iDLlt-------DsgT-~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~ 97 (450)
T TIGR02618 36 SEDVYIDLLT-------DSGT-NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRG 97 (450)
T ss_pred cCceEEEccc-------CCCc-HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHH
Confidence 3455666533 3344 666666 666665543 4777778899999999999 4568999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHH-hhccCCCceeeeeccC--------CCCCccCChhhHHHhhcc----CceE
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIH-AAGSNNNLEARHYDLL--------PEKRWEVDLDGVEALADE----NTVA 151 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~-~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~----~~~~ 151 (387)
|++++....+++||.| +.+.|+..... +. ..|..+..++.+ ...++.+|++.+++++++ ++..
T Consensus 98 Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe--~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~l 173 (450)
T TIGR02618 98 AENLLSQIAIKPGDYV--PGNMYFTTTRYHQE--KNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPY 173 (450)
T ss_pred HHHHHHHhCCCCcCEE--CCceeHHHHHHHHH--hCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCc
Confidence 9998877778999976 66777554443 56 778766666432 123457899999999975 3446
Q ss_pred EEEeCCCC-CccccCCHHHHHHHHHHHHhcCcEEeecccccc----cc------cCCCCCcc-ccccCCCccEEEEecCc
Q 038416 152 IVIINPGN-PCGNVFSYQHLQKIARTARNLGIIVIADEVYNH----LA------FGSTPYVP-MGVFGSIVPVITLGSIS 219 (387)
Q Consensus 152 v~l~~p~n-ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~----~~------~~~~~~~~-~~~~~~~~~~~~i~s~s 219 (387)
+.+.+++| .+|+.+|.++++++.++|++||++||.|.++.. |. +.+.+... ...+.... ..++.|..
T Consensus 174 V~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a-D~~~~S~~ 252 (450)
T TIGR02618 174 ICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA-DGCTMSGK 252 (450)
T ss_pred eEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC-cEEEEeec
Confidence 77888877 558999999999999999999999999999874 11 11211100 01111111 14778899
Q ss_pred ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccC------CcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHH
Q 038416 220 KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS------HPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETAD 292 (387)
Q Consensus 220 K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 292 (387)
|.++.+- .|+++.++ +++.++++....... ..+.-...++...|.+.. +.+. +....+.+
T Consensus 253 Kd~~~~~--GG~l~~~d-------~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~----~~r~~~a~ 319 (450)
T TIGR02618 253 KDCLVNI--GGFLCMND-------DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYI----EHRVKQVR 319 (450)
T ss_pred cCCCCCC--ceEEEeCC-------HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHH----HHHHHHHH
Confidence 9976552 25555454 368887776632111 112223333333344321 2222 33333566
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEEecCc--ccccC-CCcHHHHHHHHHHhcCeEEE-cCCcc-CC-----------CC
Q 038416 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNV--SMLED-IGDDLEFCLKLAKEESVIIL-PGRTV-GM-----------KN 356 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~-~~~~~~~~~~ll~~~gi~v~-~g~~~-~~-----------~~ 356 (387)
++.+.|.+. |+.++ .|.+|..++++... +.+|. -.....++.+|..+.||-.. -|+.. +. -.
T Consensus 320 ~La~~L~~~-Gvpv~-~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~e 397 (450)
T TIGR02618 320 YLGDKLKAA-GVPIV-EPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLE 397 (450)
T ss_pred HHHHHHHHC-CCccc-CCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccc
Confidence 777788777 78854 78889888887543 11221 11456778888888888644 23322 11 14
Q ss_pred eEEEEee---CChHhHHHHHHHHHHHHHH
Q 038416 357 WLRIAFA---AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 357 ~~Ri~~~---~~~e~~~~~~~~l~~~~~~ 382 (387)
.+|+.+. -+.+.++...++|..+.++
T Consensus 398 l~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 398 LVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred eeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 6999993 3788888888888776654
No 281
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=4.8e-18 Score=155.72 Aligned_cols=281 Identities=15% Similarity=0.104 Sum_probs=184.5
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH----HHhhccCCCceee
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE----IHAAGSNNNLEAR 124 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~ 124 (387)
.+...+|++.++++. ..+..+.+++++.|+.+++.+++++||+|+++.+.|.+.. ..+. ..|+++.
T Consensus 63 ~P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~--~~Gi~v~ 132 (384)
T PRK06434 63 NPTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLK--TLGIHVD 132 (384)
T ss_pred ChhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHH--hcCcEEE
Confidence 345678888898887 3457888888999999999999999999999888776544 4555 7899999
Q ss_pred eeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
.++.++.+.+. +++ ++++|++..|+||++...+ +++|.++|++++ +++|.+++.. +.+. ++
T Consensus 133 fvd~~~~~~~~---------l~~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~---pl 194 (384)
T PRK06434 133 YIDTDRLNSLD---------FDPSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQN---PL 194 (384)
T ss_pred EECCCChhhee---------ecCCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCC---ch
Confidence 88864322222 223 6899999999999998855 888899999998 4669997531 1121 22
Q ss_pred cccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 204 GVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
. ... .+++.|.+|.++.+| .=.|.+++++ +++.++++... ..+...+++..+.+..-|+ .++
T Consensus 195 ~-~ga---Divv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~-----tL~ 258 (384)
T PRK06434 195 D-LGA---DVVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGLK-----TLG 258 (384)
T ss_pred h-cCC---CEEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCC-----cHH
Confidence 2 222 388999999976544 3356665543 24666666443 3344445544444333343 378
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPVKPQ----------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT 351 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 351 (387)
.+.++.+++++.+.+.|++.|.+..+.+|. .|.++.+.+.. . .....+++.+ +=..+.++-|+.
T Consensus 259 ~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~---~~~~~f~~~l-~l~~~~~slG~~ 332 (384)
T PRK06434 259 LRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--M---EDVHKFIRNL-EIPMVAASLGGV 332 (384)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC--H---HHHHHHHHhC-CcceEccCCCCC
Confidence 888999999999999999998776666664 34455555531 0 1222333332 111111111211
Q ss_pred c----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 352 V----------------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 352 ~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
. +. ++.+|||++. |+.+.+++.|.+++.
T Consensus 333 ~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl--Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 333 ESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI--EDIDDLIKDIENALS 383 (384)
T ss_pred CeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHhc
Confidence 0 00 3579999999 677888888888774
No 282
>PLN02271 serine hydroxymethyltransferase
Probab=99.84 E-value=8.1e-18 Score=156.21 Aligned_cols=337 Identities=13% Similarity=0.047 Sum_probs=220.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCC--CCEEEcCChHHHHHHHHHhhcCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSP--EDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
-+++.+.+++-..+.+....+|+. .....+++....+...+.|+..... .+|..- +++.|+.+++.+|++|
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~P 237 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLP 237 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCC
Confidence 467888888888877755444442 2233466666666666656533211 355444 6788999999999999
Q ss_pred CCeEEEcCCCCcchHHHhh-------ccCCCceee--eeccCCCCCccCChhhHHH-hhccCceEEEEeCCCCCccccCC
Q 038416 97 GANILIPRPGYPLYEIHAA-------GSNNNLEAR--HYDLLPEKRWEVDLDGVEA-LADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~-------~~~~g~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
||+|+..+..|.+...... .+..|..+. +++++++ ...+|.+++++ +...++++|++....+| ..++
T Consensus 238 GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D 314 (586)
T PLN02271 238 GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILICGGSSYP--REWD 314 (586)
T ss_pred CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC
Confidence 9999998777665433211 114454444 4445433 34799999998 66778998888766776 3444
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCC-CCccccccCCCccEEEEecCcccccccccceEEEEeeCCCC------
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG------ 239 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~------ 239 (387)
++++.++|+++|+++++|.+|......+. ...++.. . .++.+|.+|+ +.|.|.|.++.++...
T Consensus 315 ---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~--a---Dvvt~TTHKt--LrGPrGG~I~~r~~~~~~~~g~ 384 (586)
T PLN02271 315 ---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY--C---DIVTSTTHKS--LRGPRGGIIFYRKGPKLRKQGM 384 (586)
T ss_pred ---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC--C---cEEEeCCccc--CCCCCceEEEecccccccccCC
Confidence 78888899999999999999995443332 2223321 2 2889999999 5677779988864210
Q ss_pred ------cccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 038416 240 ------ILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ 311 (387)
Q Consensus 240 ------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 311 (387)
....+++.+++.+... +-+++.....++++.+++......+....+++.+|++.+.+.|.+. |+.++....
T Consensus 385 ~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT 463 (586)
T PLN02271 385 LLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT 463 (586)
T ss_pred ccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC
Confidence 0011345454443321 2233444455666666665433445888899999999999999887 788665556
Q ss_pred ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-----CCeEEEEe------eCChHhHHHHHHHHHHHH
Q 038416 312 GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-----KNWLRIAF------AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~Ri~~------~~~~e~~~~~~~~l~~~~ 380 (387)
....+++++...+. ....+..+|++.||.++....++. +..+||+. +..++++.++.+.|.+++
T Consensus 464 dnHlvLvDl~~~g~-----~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~ 538 (586)
T PLN02271 464 DNHLLLWDLTTLGL-----TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAA 538 (586)
T ss_pred CcceeeecCcccCC-----CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 66677777754321 345667778999999874333222 46799998 235688888888887776
Q ss_pred H
Q 038416 381 Q 381 (387)
Q Consensus 381 ~ 381 (387)
+
T Consensus 539 ~ 539 (586)
T PLN02271 539 Q 539 (586)
T ss_pred h
Confidence 5
No 283
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-17 Score=156.96 Aligned_cols=347 Identities=15% Similarity=0.082 Sum_probs=201.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~ 87 (387)
.++++.-|.-.....+ .+|.+.+++++++..... +.......+....+++.+....+ .. .+.|++++++++|++
T Consensus 43 ~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGseA~e 117 (445)
T PRK08593 43 TYIDLLASASSQNVGH-APPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGSDAND 117 (445)
T ss_pred EEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchHHHHH
Confidence 4555544322222233 579999999999875322 11111123444455555544322 12 258999999999999
Q ss_pred HHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCC-------------ceeeeeccCCCCC--cc-CC-------hhhHH
Q 038416 88 ISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNN-------------LEARHYDLLPEKR--WE-VD-------LDGVE 142 (387)
Q Consensus 88 ~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~--~~-~~-------~~~l~ 142 (387)
.+++... ....+|+....+|++....+. +..+ .++..+|.+.... +. .+ +++++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSL-SMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLK 196 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHH-hhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHH
Confidence 9998743 123578888989988643332 0111 0122233221100 00 01 13344
Q ss_pred Hhhc----cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEE
Q 038416 143 ALAD----ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITL 215 (387)
Q Consensus 143 ~~~~----~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i 215 (387)
+.++ +...+.++..| ++..|.. +|++.++++.++|++||+++|+||++.+|...|..+.. .....++ +
T Consensus 197 ~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD-----i 271 (445)
T PRK08593 197 EMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD-----L 271 (445)
T ss_pred HHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC-----E
Confidence 4332 12334444555 6677876 78888999999999999999999999987665542211 1122222 4
Q ss_pred ecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Q 038416 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADIC 294 (387)
Q Consensus 216 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 294 (387)
.+++|.++ .|+++|++++++ ++.+.+.... .+++..++.+++++.+.|+...++. ..++.+++.+++
T Consensus 272 ~t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l 339 (445)
T PRK08593 272 MSFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDES---LLQRSAEKGEYA 339 (445)
T ss_pred eeeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHH
Confidence 47899965 679999999976 6777664322 2456778888888887777544332 233334343444
Q ss_pred HHHhh----cCCCCCCCCCCCceEEEEEecCcc---cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CC
Q 038416 295 YERIK----EIPCITCPVKPQGAMFVMVKLNVS---MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AE 365 (387)
Q Consensus 295 ~~~l~----~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~ 365 (387)
++.|+ ++|.+.. ....|.++.+.+... ..+.......+...+ .++||.+.+.. .+.+|+.+. ++
T Consensus 340 ~~~L~~l~~~~~~v~~--vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l~~t 412 (445)
T PRK08593 340 RKRFDQWVSKYNFVGD--VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPLVIT 412 (445)
T ss_pred HHHHHHHHhcCCcEEE--EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCCccC
Confidence 44443 3432221 233455555555321 111100123444444 56799987632 468999884 68
Q ss_pred hHhHHHHHHHHHHHHHHhhh
Q 038416 366 PATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 366 ~e~~~~~~~~l~~~~~~~~~ 385 (387)
+++++.+++.+.++++++.+
T Consensus 413 ~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 413 YEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987654
No 284
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=1.4e-17 Score=157.00 Aligned_cols=336 Identities=14% Similarity=0.051 Sum_probs=200.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLAR 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~ 95 (387)
.+++.+.+++.+.+.+....+|+ ...-..++++...+...+.++ ...+.+.+ ..+|+.|+..++.+|++
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~ 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQ 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCC
Confidence 57888999999988554333332 222344555433333333333 23333333 37788999999999999
Q ss_pred CCCeEEEcCC---CCcchHH---HhhccCCCce--eeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCC
Q 038416 96 PGANILIPRP---GYPLYEI---HAAGSNNNLE--ARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 96 ~g~~vl~~~p---~~~~~~~---~~~~~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~ 166 (387)
+||+|+..+. +|.+... ..+.+..+.. +..+.++. ++..+|+++|++.+.. ++++|++ ..++ +|...+
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D 199 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWD 199 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccC
Confidence 9999998442 3332211 1120112211 12334443 3457899999998864 5665544 3333 565654
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCC-ccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc----
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY-VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL---- 241 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~---- 241 (387)
+++|.++|+++|+++++|++|.......... .++. ...++++|++|++ .|.+.|++++++.. .-
T Consensus 200 ---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----~~Div~~t~hK~L--~GP~Gg~I~~~~~~-~~~~~~ 268 (475)
T PLN03226 200 ---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----YCDVVTTTTHKSL--RGPRGGMIFFRKGP-KPPKGQ 268 (475)
T ss_pred ---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----CCeEEEecCcccc--cCCCceEEEEchhh-cccccC
Confidence 7788899999999999999998543332211 2221 1238899999996 33444888876411 00
Q ss_pred ---cchhHHHHHHhhh--hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 038416 242 ---QNSGFVDSIKGCL--NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFV 316 (387)
Q Consensus 242 ---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 316 (387)
...++.+.+.... .+..++++....++..+++...+...++..+++.++++++.+.|++. |+.++........+
T Consensus 269 g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~ 347 (475)
T PLN03226 269 GEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLV 347 (475)
T ss_pred CCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEE
Confidence 0001211121111 12344556666666666665433445677889999999999999886 78755322334566
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-----CCCeEEEEe------eCChHhHHHHHHHHHHHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-----MKNWLRIAF------AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~~Ri~~------~~~~e~~~~~~~~l~~~~~~ 382 (387)
++.+..... +.. .+...|++.||.+..+..++ .++.+|++. +.++++++++.+.|.++++.
T Consensus 348 lv~~~~~gi----~~~-~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 348 LWDLRPLGL----TGS-RVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred EEEccCCCC----CHH-HHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 677643221 333 34455678899998764322 246799966 34788999999999998873
No 285
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.83 E-value=2.8e-17 Score=154.78 Aligned_cols=335 Identities=13% Similarity=0.117 Sum_probs=195.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEcCChHHHHHHHHHhhc--CCCCeEEE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED-VYLTLGCSQAIEISLSVLA--RPGANILI 102 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~--~~g~~vl~ 102 (387)
.+|.+.+++++++......+.. .-..+.+..+++.+....+....... +++++++++|++.+++... ....+|+.
T Consensus 56 ~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~ 133 (442)
T TIGR00709 56 NHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVIS 133 (442)
T ss_pred CCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEE
Confidence 5788999999988763211111 11234555666666554321111234 4556899999999998754 22367999
Q ss_pred cCCCCcchHHHhhccCCC------------ceeeeeccCCCCC--cc----CCh----hhHHHhhc------cCceEEEE
Q 038416 103 PRPGYPLYEIHAAGSNNN------------LEARHYDLLPEKR--WE----VDL----DGVEALAD------ENTVAIVI 154 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~--~~----~~~----~~l~~~~~------~~~~~v~l 154 (387)
...+|++....+. +..+ ..+..++.+.... +. .+. +.+++.++ .+..++++
T Consensus 134 ~~~~yHG~t~~~~-s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~ 212 (442)
T TIGR00709 134 FSGGFHGMTIGAL-AVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVIL 212 (442)
T ss_pred EcCCcCCchHHHH-hhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 9999988654444 0111 0122222211100 00 011 11333332 23344454
Q ss_pred eCCCCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE
Q 038416 155 INPGNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 155 ~~p~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
...++..|. .+|++.++++.++|++||+++|.||++.+|...|..+. ...++....++ +++|.++. |+++|+++
T Consensus 213 Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~PDiv---~~gK~l~~-G~Pigav~ 287 (442)
T TIGR00709 213 EAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFA-FEHAGIEPDFV---VMSKAVGG-GLPLAVLL 287 (442)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhH-HHHcCCCCcEE---EEcccccC-CcccEEEE
Confidence 444554554 58889999999999999999999999999877664332 22232222233 37899865 89999999
Q ss_pred eeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPV 308 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~ 308 (387)
+++ + .+.+... ...+++.+++++.++.+.|+...++.+ .+..+++.+++.+.|++ .|.+..
T Consensus 288 ~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~-- 353 (442)
T TIGR00709 288 IAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNL---AQNAQERGERITSFLDDMIKEHPCIGN-- 353 (442)
T ss_pred Ech--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCCCeee--
Confidence 975 3 2333211 234677899999999888875443333 33444444444444443 443321
Q ss_pred CCCceEEEEEecCccccc-C----CC---cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 309 KPQGAMFVMVKLNVSMLE-D----IG---DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~~-~----~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
...-|.++.+.+...... + .. .....+...+.++|+.+.+... ..+.+|+.+. +++++++++++++.+
T Consensus 354 vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~~~~~~l~~ 431 (442)
T TIGR00709 354 VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRLLCPITIDQEECEEGISRFKQ 431 (442)
T ss_pred eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 234566777766432100 0 00 1122233344677999876432 1478898884 689999999999999
Q ss_pred HHHHhh
Q 038416 379 FCQRHA 384 (387)
Q Consensus 379 ~~~~~~ 384 (387)
++++..
T Consensus 432 ~l~~~~ 437 (442)
T TIGR00709 432 AVEEAL 437 (442)
T ss_pred HHHHHH
Confidence 997753
No 286
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.83 E-value=2.4e-19 Score=154.24 Aligned_cols=290 Identities=16% Similarity=0.198 Sum_probs=188.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC----C--CeEEEcCCCCcchHHHhhccCCCcee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP----G--ANILIPRPGYPLYEIHAAGSNNNLEA 123 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----g--~~vl~~~p~~~~~~~~~~~~~~g~~~ 123 (387)
....+|++.|.+++....+..++...|++.+|+|+.+++++.+|... + -+|+...|.|+.|..... .+.-..
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~--~f~s~~ 120 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTD--FFDSRL 120 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCC--CT-BTT
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHH--hccccC
Confidence 45689999999999887777777789999999999999999999632 1 389999999999988877 665555
Q ss_pred eeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc
Q 038416 124 RHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
..+.-+. ..| ...-.+.+-+=++++||||.|.+ .+.++ +..+..+|-|-+|.+-.| .++
T Consensus 121 y~w~Gda-~~~-------~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhy-----TpI 179 (363)
T PF04864_consen 121 YKWAGDA-SNF-------KNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHY-----TPI 179 (363)
T ss_dssp EEEEEEC-CCG-------TT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTT-----S--
T ss_pred ccccccH-Hhh-------ccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccc-----ccc
Confidence 5554321 112 11111234444899999999988 55554 355667899999986332 333
Q ss_pred cc-cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccH----
Q 038416 204 GV-FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNE---- 277 (387)
Q Consensus 204 ~~-~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~---- 277 (387)
.. .+. .+-+.|+||.=|-+|-|+||.+..| .++.+++..+.. .+.+.+.-+|..+.++|+...+
T Consensus 180 ~~~aD~---DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~ 249 (363)
T PF04864_consen 180 TAPADH---DIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGT 249 (363)
T ss_dssp -S-B-----SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCH
T ss_pred CCCCCC---ceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccC
Confidence 22 222 3778899999999999999999976 468888888754 4567888889888888775221
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C-----------CceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 278 -----AFFAKIIGLLKETADICYERIKEIPCITCPVK-P-----------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 278 -----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
..+.--.+.+++|-+.+++.+..-..+.+... | ...-|.|++++.. ..+.+...++
T Consensus 250 ~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~ 322 (363)
T PF04864_consen 250 EKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLR 322 (363)
T ss_dssp HTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHH
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHH
Confidence 25566667788888888888876322221111 1 1234889998752 2345666778
Q ss_pred hcCeEEEcCCccCC-CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 341 EESVIILPGRTVGM-KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 341 ~~gi~v~~g~~~~~-~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+.||....|..|+. ..++|||+-.++++++.++++|...
T Consensus 323 ~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 323 EAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp CTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred hCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999988 5799999999999999999998653
No 287
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.83 E-value=2.1e-17 Score=156.82 Aligned_cols=350 Identities=15% Similarity=0.083 Sum_probs=204.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPT-LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.++|+.-|.-...-. -.+|.+.+++++++..... +... ....+....+++.+.+.+. +.+-+.++++++|++|++
T Consensus 90 ~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsEA~e 165 (504)
T PLN02760 90 KYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSEAND 165 (504)
T ss_pred EEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHHHHH
Confidence 455554443222222 3678999999999876321 1111 1223445555555544321 122357899999999999
Q ss_pred HHHHhhc------C-CC-CeEEEcCCCCcchHHHhhccCCCce------------eeeeccCCCCCcc-----------C
Q 038416 88 ISLSVLA------R-PG-ANILIPRPGYPLYEIHAAGSNNNLE------------ARHYDLLPEKRWE-----------V 136 (387)
Q Consensus 88 ~~~~~l~------~-~g-~~vl~~~p~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~-----------~ 136 (387)
.+++... . ++ .+|+..+.+|++...... +..|.. +..++.+....+. .
T Consensus 166 ~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~-slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 166 TQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhh-hccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 9999863 1 23 678888988987643322 012211 1111111000000 0
Q ss_pred ChhhHHHhhc---cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCcc
Q 038416 137 DLDGVEALAD---ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP 211 (387)
Q Consensus 137 ~~~~l~~~~~---~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 211 (387)
..+++++.+. ++..+.++..| +...|.. +|++.++++.++|++||+++|+||++.+|+..|..+. ...++-.
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv~-- 321 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNIK-- 321 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCCC--
Confidence 1234666553 23445566666 5566765 5677799999999999999999999998876665332 2222221
Q ss_pred EEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 212 VITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 212 ~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
.-|.+++|.++...+++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ +.
T Consensus 322 -PDivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~---~l 389 (504)
T PLN02760 322 -PDLVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER---NI 389 (504)
T ss_pred -CcEEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC---CH
Confidence 225578899644335899999876 677766531 1245677898999888888764432 23
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEEecCccccc-C-CCc----HHHHHHHHHHhcCeEEEcCCccCCCC
Q 038416 284 IGLLKETADICYERIKEIPCITCP-VKPQGAMFVMVKLNVSMLE-D-IGD----DLEFCLKLAKEESVIILPGRTVGMKN 356 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~g~~~~~~~~~~~~~-~-~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~ 356 (387)
.++++++.+++++.|+++.....+ ....-|.++-+.+.....+ . ... ...+... +.++||.+.+. .+
T Consensus 390 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~-----g~ 463 (504)
T PLN02760 390 PEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAE-CKKRGMLVRVA-----GD 463 (504)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHH-HHhCCcEEEec-----CC
Confidence 444555555555555443111111 1123356666666321110 0 000 2234444 46679998774 25
Q ss_pred eEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 357 WLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 357 ~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+|+++. +++++++++++++.+++++..
T Consensus 464 ~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 464 NIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899974 799999999999999997764
No 288
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=1.8e-17 Score=156.33 Aligned_cols=336 Identities=14% Similarity=0.116 Sum_probs=203.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+++++++..... +.......+.+..+++.+.+..+ ...+.+++++++++|++.+++.... ..
T Consensus 69 ~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r 144 (460)
T PRK06541 69 GRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGK 144 (460)
T ss_pred CCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCc
Confidence 578899999999875321 11111112334445555544322 2236899999999999999987531 13
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC---ccCC--------hhhHHHhhc---cCceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR---WEVD--------LDGVEALAD---ENTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~---~~~~--------~~~l~~~~~---~~~~~ 151 (387)
.+|+....+|++....+. +..+. .+..+|.+.... +.-+ ++.+++.++ +...+
T Consensus 145 ~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~A 223 (460)
T PRK06541 145 HKVISRAIAYHGTTQGAL-AITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVA 223 (460)
T ss_pred cEEEEEcCcccCcchhhh-cCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 689999999987654333 01111 112222111000 1111 256666664 34566
Q ss_pred EEEeCC-CCCccccCC-HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccccccc-c
Q 038416 152 IVIINP-GNPCGNVFS-YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGW-R 228 (387)
Q Consensus 152 v~l~~p-~nptG~~~~-~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~-r 228 (387)
.++..| ++++|...+ .+.++++.++|++||+++|+||++.+|...|..+. ...++.... + .+++|.++ +|+ +
T Consensus 224 avi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a-~~~~gv~PD-i--vt~gK~l~-~G~~p 298 (460)
T PRK06541 224 AVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFG-CERFGYVPD-I--ITCAKGIT-SGYSP 298 (460)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhh-hhhcCCCCC-E--EEeccccc-CCccc
Confidence 677777 888998754 78899999999999999999999988754444322 111221112 2 25899976 676 9
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC----L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
+|++++++ ++.+.+... . ..+++.++++.+++.+.|+...++ ...++++++.+++.+.|+++..
T Consensus 299 igav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~ 367 (460)
T PRK06541 299 LGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLD 367 (460)
T ss_pred eeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhc
Confidence 99999976 666666432 1 135567778887777777653322 3446666777777777766522
Q ss_pred CCCC-CCCCceEEEEEecCccc--ccCCCc------HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHH
Q 038416 304 ITCP-VKPQGAMFVMVKLNVSM--LEDIGD------DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDG 372 (387)
Q Consensus 304 ~~~~-~~~~~g~~~~~~~~~~~--~~~~~~------~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~ 372 (387)
..++ .....|.++.+.+.... ...+.. ....+...+.++||.+.+... ..+.+|+++. +++++++++
T Consensus 368 ~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--g~~~lrl~Ppl~~t~~~id~~ 445 (460)
T PRK06541 368 LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--GDPVVQLAPPLISGQEEFDEI 445 (460)
T ss_pred CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCC--CCCEEEEECCCCCCHHHHHHH
Confidence 2211 12234666666663211 000000 011233344567999987311 1467999996 799999999
Q ss_pred HHHHHHHHHHhh
Q 038416 373 LERIKAFCQRHA 384 (387)
Q Consensus 373 ~~~l~~~~~~~~ 384 (387)
+++|.+++++..
T Consensus 446 ~~~l~~~l~~~~ 457 (460)
T PRK06541 446 EQILRSVLTEAW 457 (460)
T ss_pred HHHHHHHHHHHH
Confidence 999999997643
No 289
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=2.6e-17 Score=154.85 Aligned_cols=328 Identities=14% Similarity=0.119 Sum_probs=199.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc----CCC-CeE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA----RPG-ANI 100 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~g-~~v 100 (387)
.+|.+.+|+++++..... ++. ....+.+..+++.+....+ ...+.+++++++++|++.+++... ++| .+|
T Consensus 99 ~~p~v~~Ai~~ql~~l~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~i 173 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQPL--HSQ-ELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTF 173 (459)
T ss_pred CCHHHHHHHHHHHhhCcc--ccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEE
Confidence 578899999999875321 111 1223445555555544332 233689999999999999999754 123 478
Q ss_pred EEcCCCCcchHHHhhccCCCceeee---eccCCCCC--ccCChhhHHHhhcc-----CceEEEEeCC-CCCcccc-CCHH
Q 038416 101 LIPRPGYPLYEIHAAGSNNNLEARH---YDLLPEKR--WEVDLDGVEALADE-----NTVAIVIINP-GNPCGNV-FSYQ 168 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~-----~~~~v~l~~p-~nptG~~-~~~~ 168 (387)
+....+|++...... +..+-.... .+..+.-. .--|.+++++.++. ...+.+++.| +...|.. .|++
T Consensus 174 i~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~ 252 (459)
T PRK11522 174 IATSGAFHGKSLGAL-SATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEG 252 (459)
T ss_pred EEecCCCCCCcHHHh-hhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHH
Confidence 888999998654433 012211111 11111000 01156777776642 2334455555 6667775 5667
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~ 247 (387)
.++++.++|++||+++|+||++.++...|..+. ...++-... +-+++|.++ +| +++|.+++++ ++.
T Consensus 253 yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a-~e~~gv~PD---ivt~gK~lg-gG~~Pigav~~~~--------~i~ 319 (459)
T PRK11522 253 YLTAVRKLCDEFGALLILDEVQTGMGRTGKMFA-CEHENVQPD---ILCLAKALG-GGVMPIGATIATE--------EVF 319 (459)
T ss_pred HHHHHHHHHHHcCCEEEeccceecCCccchhhh-hhccCCCCC---EEEechhhh-CCCccceeEEEcH--------HHH
Confidence 799999999999999999999998765554322 111221112 337889964 55 6899999875 566
Q ss_pred HHHHhh---hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEEe
Q 038416 248 DSIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPC-ITCPVKPQGAMFVMVK 319 (387)
Q Consensus 248 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~~~~~~~~g~~~~~~ 319 (387)
+.+... ...+++.++.+.+++.+.|+...++. ..++++++-+++++.|++ +|. +..+ ...|.++.+.
T Consensus 320 ~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~V--rG~Gl~~gie 394 (459)
T PRK11522 320 SVLFDNPFLHTTTFGGNPLACAAALATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLVQEA--RGKGMLMAIE 394 (459)
T ss_pred HHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCceeeE--EeceeEEEEE
Confidence 655321 12455668888888888777644332 334455555555555554 332 1211 2346676776
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+... .....+...+ .++||.+.+... ..+.+|+.+. .+++++++++++|.++++++.+
T Consensus 395 l~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 395 FVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred ecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 6531 0123444544 567999876421 2478999984 6899999999999999987653
No 290
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=1.1e-17 Score=154.71 Aligned_cols=284 Identities=14% Similarity=0.180 Sum_probs=184.7
Q ss_pred CCEEEcCChH-HHHHHHHHhhcC---CCCeEEEcCCCCcchHHHhhccCCCceeeeecc-CCCCCccCChhhHHHhhcc-
Q 038416 74 EDVYLTLGCS-QAIEISLSVLAR---PGANILIPRPGYPLYEIHAAGSNNNLEARHYDL-LPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 74 ~~i~~~~g~~-~a~~~~~~~l~~---~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~- 147 (387)
...++++++| .++.+++.++.. +||.|+++.-+|.+....+. ..|++++.++. ...+++.+|++.|++++++
T Consensus 124 ~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~--~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~ 201 (444)
T TIGR03531 124 KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIS--TAGFEPRVIETVLDGDELTTDVEDIERAIEEI 201 (444)
T ss_pred CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHH--HcCCeEEEeeeeecCcCCCcCHHHHHHHHHhc
Confidence 3588888888 688888877652 58999999999999999999 99999999985 3356789999999999976
Q ss_pred --CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc--cccCCCccEEEEecCccccc
Q 038416 148 --NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM--GVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 148 --~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~s~sK~~~ 223 (387)
++.++++.+|+ |+.....+++++|+++|++||+++|+|++|+.... ....+ .......-.+++.|++|.+.
T Consensus 202 ~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~---~~~~~~~~g~~~Grad~vv~s~hK~l~ 276 (444)
T TIGR03531 202 GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN---KYMELINKAIKVGRVDAVVSSTDKNFM 276 (444)
T ss_pred cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh---hhhhhhhccccccCCCeEEEeCccCCC
Confidence 44566666664 44444458899999999999999999999995221 11111 11111001366789999988
Q ss_pred ccccceEEEE-eeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 038416 224 VPGWRLGWLV-TSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP 302 (387)
Q Consensus 224 ~~g~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (387)
++|. |+++ +++ +++.+.+...... ...+.+.+.+...++. ...+.+.+..++..++++++.+.|+++.
T Consensus 277 ~pg~--Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~ 345 (444)
T TIGR03531 277 VPVG--GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLA 345 (444)
T ss_pred CCCC--EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765 5544 543 3677777654331 2233456666555554 4567788889999999999988888752
Q ss_pred ---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE----EEcCC-------cc---CC------CCeEE
Q 038416 303 ---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI----ILPGR-------TV---GM------KNWLR 359 (387)
Q Consensus 303 ---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~----v~~g~-------~~---~~------~~~~R 359 (387)
|..+...|.....+.+.+.... ..+...+-.. |..++|. |.+|. .| +. ..++-
T Consensus 346 ~~~~~~~~~~~~n~is~~~~~~~~~---~~~~~~~g~~-l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 421 (444)
T TIGR03531 346 ERHGERLLDTPENPISSAMTLSTLK---GKDPTMLGSM-LYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYIT 421 (444)
T ss_pred HhhCcEeecCCCCceeEEEeccccc---ccCHHHHHHH-HHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHH
Confidence 3443323333333333443211 1133344443 4555552 33554 22 11 12444
Q ss_pred EEe--eCChHhHHHHHHHHHHH
Q 038416 360 IAF--AAEPATLEDGLERIKAF 379 (387)
Q Consensus 360 i~~--~~~~e~~~~~~~~l~~~ 379 (387)
++. +.+++|++..+++|.++
T Consensus 422 ~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 422 AAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HHHHhCCcHHHHHHHHHHHhhc
Confidence 444 56899999999998765
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=6.6e-17 Score=151.93 Aligned_cols=346 Identities=17% Similarity=0.122 Sum_probs=200.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.++|..-|.-...-++ .+|.+.+++++++.+... .....-..+....+|+.+....+. -..+.++++++|++|++.
T Consensus 55 ~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsEA~e~ 130 (441)
T PRK05769 55 VYLDFNAGIAVTNVGH-AHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTESNEA 130 (441)
T ss_pred EEEECCCchhhcccCC-CCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHHHHHH
Confidence 4555544432122122 568899999998875321 111111134455566666543321 113689999999999999
Q ss_pred HHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCC--cc---------CChhhHH
Q 038416 89 SLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKR--WE---------VDLDGVE 142 (387)
Q Consensus 89 ~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~---------~~~~~l~ 142 (387)
+++... ...++|+....+|++....+. +..+. .+..++.+.... +. ..++.++
T Consensus 131 AlklAr~~tgr~~Ii~~~~~yHG~t~~~l-s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 131 AIKIARYHTGRKYIIAFLGAFHGRTYGSL-SLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHhCCCeEEEECCCcCCccHHHH-HhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 998753 223688888999988664433 01111 112222211000 00 0123355
Q ss_pred H-hhc----cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEE
Q 038416 143 A-LAD----ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITL 215 (387)
Q Consensus 143 ~-~~~----~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i 215 (387)
+ .++ ++..+.++..| +...|.. .+.+.++++.++|++||+++|+||++.++...|..+. ...+.....++
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a-~~~~gv~pDiv-- 286 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFA-IEHFGVEPDII-- 286 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceeh-hhccCCCCCEE--
Confidence 5 222 23445556666 5566775 5677799999999999999999999998766554322 11222212222
Q ss_pred ecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Q 038416 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICY 295 (387)
Q Consensus 216 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 295 (387)
+++|.++ .|+++|++++++ ++.+........+++.+++++.++.+.|+...+ +..++++++.++++
T Consensus 287 -t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~ 352 (441)
T PRK05769 287 -TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGEYLR 352 (441)
T ss_pred -EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 5789976 679999999876 444322222233556688888888888775433 33445555555555
Q ss_pred HHhhc----CCCCCCCCCCCceEEEEEecCccc-ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHh
Q 038416 296 ERIKE----IPCITCPVKPQGAMFVMVKLNVSM-LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPAT 368 (387)
Q Consensus 296 ~~l~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~ 368 (387)
+.|++ ++.+. ....-|.++.+.+.... .+.......+... +.++||.+.+.. .+.+|+++. +++++
T Consensus 353 ~~L~~l~~~~~~~~--~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~Gil~~~~~----~~~lr~~p~l~~t~~~ 425 (441)
T PRK05769 353 KELKELKEKYEFIG--DVRGLGLMIGVELVKDRKEPDPKLRDKVLYE-AFKRGLLLLGAG----KSAIRIIPPLIITEEE 425 (441)
T ss_pred HHHHHHHHhCCCee--eeecceEEEEEEeccCCccccHHHHHHHHHH-HHhCCcEEecCC----CCEEEEeCCCCCCHHH
Confidence 55544 33222 12234666666663211 0000011234444 456799987642 367999985 48999
Q ss_pred HHHHHHHHHHHHHHh
Q 038416 369 LEDGLERIKAFCQRH 383 (387)
Q Consensus 369 ~~~~~~~l~~~~~~~ 383 (387)
++++++++.+++++.
T Consensus 426 id~~~~~l~~~l~~~ 440 (441)
T PRK05769 426 ADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 292
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.82 E-value=1.7e-17 Score=154.93 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=193.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----CC-CeE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----PG-ANI 100 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g-~~v 100 (387)
.+|.+.+++++++..... .+. ....+.+..+|+.+.+..+ ...+.+++++++++|++.+++.... .| .+|
T Consensus 92 ~hp~v~~Av~~ql~~l~~--~~~-~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~i 166 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQPL--HSQ-ELLDPLRALLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTF 166 (442)
T ss_pred CCHHHHHHHHHHHHhCCC--ccc-ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEE
Confidence 678899999998875321 111 1123444555555544332 1235799999999999999987542 24 679
Q ss_pred EEcCCCCcchHHHhhccCC-Ccee---eeeccCCCCC--ccCChhhHHHhhcc-----CceEEEEeCC-CCCccccC-CH
Q 038416 101 LIPRPGYPLYEIHAAGSNN-NLEA---RHYDLLPEKR--WEVDLDGVEALADE-----NTVAIVIINP-GNPCGNVF-SY 167 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~~-g~~~---~~~~~~~~~~--~~~~~~~l~~~~~~-----~~~~v~l~~p-~nptG~~~-~~ 167 (387)
+....+|++...... .. +-.. ...|+.+.-. ...|.+.+++.++. ...+.++..| +...|... |+
T Consensus 167 i~~~~~yHG~t~~~l--s~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~ 244 (442)
T TIGR03372 167 IAASGAFHGKSLGAL--SATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPE 244 (442)
T ss_pred EEECCCccCCCHHHh--hccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCH
Confidence 999999988654433 22 2110 0111111000 01146666665531 3344455555 66677764 67
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~ 246 (387)
+.++++.++|++||+++|+||++.++...|..+. +..++-... +.+++|.++ +| +++|.+++++ ++
T Consensus 245 ~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~e~~gv~PD---ivt~gK~lg-~G~~Pigavv~~~--------~i 311 (442)
T TIGR03372 245 GYLPAVRALCDEFGALLILDEVQTGMGRTGKMFA-CEHEGVQPD---ILCLAKALG-GGVMPIGATIATE--------AV 311 (442)
T ss_pred HHHHHHHHHHHHcCCEEEEeecccCCCccccchh-hhhcCCCCC---eeeehhhhc-CCcccceEEEecH--------HH
Confidence 7799999999999999999999998765554322 111221111 335899964 56 6899999875 66
Q ss_pred HHHHHhh---hhccCCcchHHHHHHHHHhhhccHHHHHHH-HHHHHHHHHHHHHHhhcCC-CCCCCCCCCceEEEEEecC
Q 038416 247 VDSIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKI-IGLLKETADICYERIKEIP-CITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 247 ~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~~~~~~~ 321 (387)
.+.+... ...+++.++.+.+++.+.|+..+++.+.++ .+.-...++.+.+..+++| .+..+ ...|.++.+.+.
T Consensus 312 ~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v--RG~Gl~~giel~ 389 (442)
T TIGR03372 312 FSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA--RGKGLLMAIEFR 389 (442)
T ss_pred HHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEE--ecceEEEEEEeC
Confidence 6666321 124566788888888888876443333222 2222233333333333344 22212 345777777775
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
... ....+...+ .++||++.+... ..+.+|+.+. .++++++++++++.+++
T Consensus 390 ~~~-----~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 390 DNE-----IGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ChH-----HHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 320 123455555 567999875321 1468999984 68999999999998763
No 293
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.82 E-value=7e-17 Score=151.63 Aligned_cols=331 Identities=15% Similarity=0.109 Sum_probs=196.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------C-C
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------P-G 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~-g 97 (387)
.+|.+.+++++++.+-.. .+......+.+..+++.+.+..+ ..-+.+++++++++|++.+++.... + .
T Consensus 63 ~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r 138 (442)
T PRK13360 63 GRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSR 138 (442)
T ss_pred CCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 678899999999875211 11111122444455555544332 2236899999999999999987531 2 2
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCC--C-CCccC--------ChhhHHHhhc---cCceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLP--E-KRWEV--------DLDGVEALAD---ENTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~--------~~~~l~~~~~---~~~~~ 151 (387)
.+|+....+|++....+. +..|. .+..+|... . ..+.. .++.+++.+. +...+
T Consensus 139 ~~ii~~~~~yHG~t~gal-s~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a 217 (442)
T PRK13360 139 TRLIGRERGYHGVGFGGI-SVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIA 217 (442)
T ss_pred cEEEEEcCCcCCccHhhh-hccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 589999999998643221 01111 112222210 0 00111 1346677664 23345
Q ss_pred EEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccc
Q 038416 152 IVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 152 v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
.+++.| +...|.. .|.+.+++|.++|++||+++|+||++.++...|..... .....+| +.+++|.++...++
T Consensus 218 avivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-----ivt~gK~l~gG~~P 292 (442)
T PRK13360 218 AVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD-----LLTCAKGLTNGAIP 292 (442)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc-----eeeeeeccccCccc
Confidence 556666 6667776 56777999999999999999999999887655543221 1122222 33789996443378
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ ...++.+++.+++.+.|++
T Consensus 293 ~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~ 361 (442)
T PRK13360 293 MGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHS 361 (442)
T ss_pred eEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH
Confidence 99999875 666655421 1245677888888888877754333 2334555555566666654
Q ss_pred CCCCCCCC-CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 301 IPCITCPV-KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 301 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
+.....+. ...-|.+.-+.+............++...+ .++||.+.++ .+.+|+++ ..+++++++++++|.
T Consensus 362 l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l~ 435 (442)
T PRK13360 362 LRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYT-----GDILALSPPLIIEEAQIDELFDILA 435 (442)
T ss_pred hhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCccCHHHHHHHHHHHH
Confidence 32111111 122344444444221110001123455554 5679998764 36799997 468999999999999
Q ss_pred HHHHHh
Q 038416 378 AFCQRH 383 (387)
Q Consensus 378 ~~~~~~ 383 (387)
++++++
T Consensus 436 ~~l~~~ 441 (442)
T PRK13360 436 QALKET 441 (442)
T ss_pred HHHHHh
Confidence 998764
No 294
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=2.8e-17 Score=164.37 Aligned_cols=305 Identities=10% Similarity=0.024 Sum_probs=205.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChH----HHHHHHHHhhcCC-CC----eEEEcCCCCcchHHHhhccCCCceee
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCS----QAIEISLSVLARP-GA----NILIPRPGYPLYEIHAAGSNNNLEAR 124 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~----~a~~~~~~~l~~~-g~----~vl~~~p~~~~~~~~~~~~~~g~~~~ 124 (387)
++|+.+++++ | .+.|.++++++ .++..+++.+.++ || .|+++...|......+. ..|++++
T Consensus 572 ~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~--~~G~~vv 641 (993)
T PLN02414 572 DLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA--MCGMKIV 641 (993)
T ss_pred HHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH--HCCCEEE
Confidence 4555555555 3 38999999988 8999999999866 87 89999999998888888 7899999
Q ss_pred eeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV 201 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~ 201 (387)
.++.+. +..+|+++|++++++ ++++|++++|+|-+|...+ +++|+++|+++|+++++|.++..... ...
T Consensus 642 ~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~---~l~ 713 (993)
T PLN02414 642 VVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQV---GLT 713 (993)
T ss_pred EeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhcc---CcC
Confidence 999853 347899999999984 6789999999999988844 89999999999999999999964110 122
Q ss_pred cccccCCCccEEEEecCccccc----ccccceEEEEeeCCCCcccchhHH--H---HHHhhhhc-cCC------cchHHH
Q 038416 202 PMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPNGILQNSGFV--D---SIKGCLNA-ASH------PVTFIQ 265 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~~~~~~~--~---~~~~~~~~-~~~------~~~~~~ 265 (387)
....++.| ++++|.+|+|+ .+|..+|++.+++.- .-.-|-.. . ..+..... ..+ .+....
T Consensus 714 ~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L-~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l 789 (993)
T PLN02414 714 SPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALIL 789 (993)
T ss_pred CccccCCC---EEEecCCccCCcCcccCCCCeeeEEEchhh-cccCCCCccccCCCcccccCCCCcCCccchhhhhHHHH
Confidence 23344444 88899999765 345668999876511 10001000 0 00000100 011 111223
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE--EEEecCcccccC--CCcHHHHHHHHHHh
Q 038416 266 AAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF--VMVKLNVSMLED--IGDDLEFCLKLAKE 341 (387)
Q Consensus 266 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~--~~~~~~~~~~ll~~ 341 (387)
.++..++...+.+.+++..+....+++++++.|++..++.+. .|.+..+ +.+.+.. ++. ..+..++...|+ +
T Consensus 790 ~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~-~~~~~~~hEfv~~~~~--l~~~~g~~~~di~krL~-d 865 (993)
T PLN02414 790 PISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFR-GKNGTCAHEFIIDLRP--FKNTAGIEPEDVAKRLM-D 865 (993)
T ss_pred HHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcccc-CCCCCeeeeEEEeccc--cccccCCCHHHHHHHHH-H
Confidence 333444555556788888899999999999999874344422 2322211 2233331 111 124467777776 7
Q ss_pred cCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 342 ESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 342 ~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+||.... ..|...+++||++ ..+++++++.++.+..+.++..+
T Consensus 866 ~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 866 YGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred cCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 8997654 3344578999999 46889999999999888877653
No 295
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=1.2e-17 Score=153.41 Aligned_cols=313 Identities=14% Similarity=0.070 Sum_probs=196.0
Q ss_pred CCcHHHHHHHHHHhcCCC-CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEc-CChHHHHHHHHHhhcCCCCe
Q 038416 25 SDSTVAEDAVVDALRTAH-YNCYSP--TLGVPSARRGIADYLNRDLPYKLS-PEDVYLT-LGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~-~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~-~g~~~a~~~~~~~l~~~g~~ 99 (387)
..++.+++++.+....-. .+++++ ..-..+.|+.++++++ ++ ..+|+++ +|+|.+++.++.+++.+ +.
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~ 85 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLIEK-KS 85 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence 578899998875421110 124443 2345677888888873 33 3478775 66999999999999743 33
Q ss_pred EEEcCCCCc-chHHHhhccC--CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 100 ILIPRPGYP-LYEIHAAGSN--NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 100 vl~~~p~~~-~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
+++..-.|. .+...+. . .+.++..++... +..++ ..+++++++|.+++..|.||+..|.++ |
T Consensus 86 l~i~~G~~~~~~~~~a~--~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~---I--- 150 (361)
T TIGR01366 86 LHLSFGEFSSKFAKAVK--LAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRR---P--- 150 (361)
T ss_pred cEEecCHHHHHHHHHHH--hhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceeccccc---c---
Confidence 334343443 2333444 3 123566665432 22222 235678999999999999999988544 4
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh----
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG---- 252 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~---- 252 (387)
++++|+++|+|.+++. +..+..+.. . .+++.|.+|+++.+|. ++.++.++ +.++++..
T Consensus 151 ~~~~g~~~iVDavqs~----g~~~idv~~--~---D~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~ 212 (361)
T TIGR01366 151 EGSDDALVVIDATSGA----GGLPVDIAE--T---DVYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAAS 212 (361)
T ss_pred cccCCCeEEEEcCccc----cCCCCCHHH--C---CEEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCC
Confidence 4789999999999985 223333332 2 3788999999987742 55555544 22222220
Q ss_pred ----------------h--hhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--
Q 038416 253 ----------------C--LNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKPQ-- 311 (387)
Q Consensus 253 ----------------~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-- 311 (387)
. ....++++.....++..+++...+. .++.+.++.++.++++++.+++++.+.......
T Consensus 213 ~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 292 (361)
T TIGR01366 213 GRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGK 292 (361)
T ss_pred CCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 0 0123455555555667777665444 477888999999999999999986555331111
Q ss_pred -ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 312 -GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 312 -~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
......+.++. + .+..++...| +++||.+.++......+.+|||+. .+.++++++++.|+++++++
T Consensus 293 ~s~~v~~v~~~~----g-~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 293 RSQVVGTIDFVD----D-IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cccceEEEECCC----c-cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 11112233332 1 2455666666 667999987653333578999993 58999999999999988764
No 296
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.81 E-value=3e-17 Score=142.63 Aligned_cols=324 Identities=17% Similarity=0.126 Sum_probs=219.8
Q ss_pred CCCCCCcHHHHHHHHHHhcCC------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 21 VSLLSDSTVAEDAVVDALRTA------HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 21 ~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
|.+...+|.|++||++.++.- +.+--+...-..+|++++|++. .++..++.+++--|+...+..|.
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--------qK~aALlFsSCfVANDstLftLa 252 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--------QKEAALLFSSCFVANDSTLFTLA 252 (570)
T ss_pred cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--------cCcceeeeeeeeeccchHHHHHH
Confidence 446789999999999999862 1122223345679999999998 34555555566667777777764
Q ss_pred C--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEEeCCCCCccccCCHH
Q 038416 95 R--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 95 ~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG~~~~~~ 168 (387)
+ ||=.|....-.|-+.....+ ..+.+-+.+.. + |++.|++.+.. -+|+|.+...++.+|.+-|
T Consensus 253 k~lpgcei~SD~gNHASMI~GIr--ns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp-- 321 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIR--NSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP-- 321 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhh--hcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC--
Confidence 3 66666677777878888888 77766544432 2 67777776642 4688889999999999977
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.+++++||++-++||+++...|+.++..--..- -.+.-.++.+++.|+||.-| |||.+.. .++
T Consensus 322 -leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~Lv 389 (570)
T KOG1360|consen 322 -LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLV 389 (570)
T ss_pred -HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHH
Confidence 8888999999999999999999666654322211000 01122377899999998877 9998876 799
Q ss_pred HHHHhhhh---ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 248 DSIKGCLN---AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+.++.+.. ++.+.+|.....+.++++...-+.=...++..+++..++++.|.++ |+.++ |.....+-+++...
T Consensus 390 DmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi--~~pSHIiPv~vgda- 465 (570)
T KOG1360|consen 390 DMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVI--PNPSHIIPVRVGDA- 465 (570)
T ss_pred HHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCcceeeeeccCH-
Confidence 99998853 2334444444444444443221212344566677888899999888 77743 44444444444321
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.-..+..+.|+.++||.+-.-.+... ...+||.+ +.+++.++.+++.+..+..++
T Consensus 466 ----~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 466 ----ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ----HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 12457788899999999986544322 35789988 468888888889888877654
No 297
>PRK07678 aminotransferase; Validated
Probab=99.81 E-value=1e-16 Score=151.10 Aligned_cols=336 Identities=15% Similarity=0.114 Sum_probs=196.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++..... ++... ..+.+..+++.+.+..+ ..+.+++++++++|++.+++.... +|
T Consensus 64 ~~p~v~~ai~~q~~~~~~--~~~~~-~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r 137 (451)
T PRK07678 64 GRKELAEAAYEQLKTLSY--FPLTQ-SHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHR 137 (451)
T ss_pred CCHHHHHHHHHHHHhcCc--ccccc-CCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 578889999998875321 11111 12334445555544332 235899999999999999988531 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC--cc-----CC---hhhHHHhhc---cCceEE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR--WE-----VD---LDGVEALAD---ENTVAI 152 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~-----~~---~~~l~~~~~---~~~~~v 152 (387)
.+|+....+|++....+. +..+. .+..++.+.... +. .+ ++.+++.++ +...+.
T Consensus 138 ~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAA 216 (451)
T PRK07678 138 YKFISRYRAYHGNSMGAL-AATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAA 216 (451)
T ss_pred cEEEEECCCcCCccHHHh-hcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 678999999998654333 01111 112222111000 00 01 223455553 234455
Q ss_pred EEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
++..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+. +..++-... +-+++|.++...+++|
T Consensus 217 vi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~-~~~~gv~PD---ivt~gK~lggG~~Pi~ 292 (451)
T PRK07678 217 VIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFG-FMNYGVKPD---IITMAKGITSAYLPLS 292 (451)
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHH-HHhcCCCCC---EEEeecccccCCccee
Confidence 66666 5556765 5777799999999999999999999999876654222 122222212 3367899654337999
Q ss_pred EEEeeCCCCcccchhHHHHHHhh-------hhccCCcchHHHHHHHHHhhhccHHHH-HHHHHHHHHHHHHHHHHhhcCC
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGC-------LNAASHPVTFIQAAVPRIVDETNEAFF-AKIIGLLKETADICYERIKEIP 302 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 302 (387)
.+++++ ++.+.+... ...+++.++.+.+++.+.|+...++.+ ++..+.-...++.+.+.+++++
T Consensus 293 av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~ 364 (451)
T PRK07678 293 ATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHP 364 (451)
T ss_pred EEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999976 677766531 135677889999988888876443322 2222222333444444444444
Q ss_pred CCCCCCCCCceEEEEEecCccc---ccC-CCcHHHHHHHHHHhcCeEEEcCCcc--CCCCeEEEEee--CChHhHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSM---LED-IGDDLEFCLKLAKEESVIILPGRTV--GMKNWLRIAFA--AEPATLEDGLE 374 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~---~~~-~~~~~~~~~~ll~~~gi~v~~g~~~--~~~~~~Ri~~~--~~~e~~~~~~~ 374 (387)
.+.. ...-|.++.+.+.... .+. ......+...+ .++||.+.+.... ...+.+|+++. +++++++++++
T Consensus 365 ~v~~--vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l-~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~ 441 (451)
T PRK07678 365 LVGD--IRGKGLLVGIELVNDKETKEPADNDKVASVVAAC-KEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVG 441 (451)
T ss_pred CEEE--EEeeceEEEEEEecCCcccCcCchHHHHHHHHHH-HHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHH
Confidence 2221 2234556556553211 000 00122344444 5679998763211 22467999984 58999999999
Q ss_pred HHHHHHHHh
Q 038416 375 RIKAFCQRH 383 (387)
Q Consensus 375 ~l~~~~~~~ 383 (387)
++.++++++
T Consensus 442 ~l~~~l~~~ 450 (451)
T PRK07678 442 TLKTALERI 450 (451)
T ss_pred HHHHHHHhc
Confidence 999998765
No 298
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.81 E-value=2.6e-17 Score=150.17 Aligned_cols=307 Identities=12% Similarity=0.114 Sum_probs=194.2
Q ss_pred CcHHHHHHHHHHhcCCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCC-CeEE
Q 038416 26 DSTVAEDAVVDALRTAHYN--CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPG-ANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g-~~vl 101 (387)
.+|.+.+++++++.+.... .|. .....++.+.++++. ..+.+++++++++|++.+++... ..| ++|+
T Consensus 41 ~~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii 111 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVVAGPMFE-HEEKEEMLEELSKWV--------NYEYVYMGNSGTEAVEAALKFARLYTGRKEII 111 (364)
T ss_pred CCHHHHHHHHHHHHhcCCccCCcC-CHHHHHHHHHHHhhc--------CCCEEEEeCchHHHHHHHHHHHHHHhCCCEEE
Confidence 4578889999998863211 122 122234444444443 23689999999999999999864 345 7899
Q ss_pred EcCCCCcchHHHhhccC-CC-------ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCcccc-CCHHHHHH
Q 038416 102 IPRPGYPLYEIHAAGSN-NN-------LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNV-FSYQHLQK 172 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~-~g-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~-~~~~~~~~ 172 (387)
....+|++...... . .+ ..+....+.. ..+ .|++.+++.+.+++.+|++...+...|.. .|.+.+++
T Consensus 112 ~~~~syHG~t~~~l--s~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~ 187 (364)
T PRK04013 112 AMTNAFHGRTMGAL--SATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKT 187 (364)
T ss_pred EECCccccCchhhc--cCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHH
Confidence 99999988653333 2 11 1111000000 011 15788888887777777766666666765 46677999
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG 252 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~ 252 (387)
+.++|++||+++|+||++.++ ..|.... ...++-..+ +.+++|.++ .|+++|.++.+. ++ .. .
T Consensus 188 lr~lc~~~gillI~DEv~tG~-RtG~~~a-~~~~gv~PD---iv~~gK~lg-gG~P~~a~~~~~--------~~-~~--~ 250 (364)
T PRK04013 188 LRDLTEDVGALLIADEVQSGL-RTGKFLA-IEHYKVEPD---IVTMGKGIG-NGVPVSLTLTNF--------DV-ER--G 250 (364)
T ss_pred HHHHHHHcCCEEEEechhhcC-CCCchhH-HHhcCCCCC---EEEeccccc-CCceeEEEEecc--------cc-cC--C
Confidence 999999999999999999987 5554222 222222222 335689965 479999999865 22 11 1
Q ss_pred hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHH
Q 038416 253 CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDL 332 (387)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (387)
....+++.++.+.+++.+.|+..+++.+.++.+.. + +.++. +.+.. ...-|.++-+.+.. ...
T Consensus 251 ~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~~v~~--vRG~Gl~~gve~~~-------~~~ 313 (364)
T PRK04013 251 KHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-ERVVT--TRGRGLMIGIVLKK-------PVG 313 (364)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-Cccee--eeeCcEEEEEEeCC-------cHH
Confidence 12346778999999988888765544443333221 2 22222 22221 23447777777742 233
Q ss_pred HHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 333 EFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+... +.++|+.+.+.. .+.+|+.+. .+++++++++++|.+++.+..
T Consensus 314 ~i~~~-~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 314 KYVEE-LQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred HHHHH-HHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 45444 466799987642 478999994 689999999999999998754
No 299
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=2e-18 Score=147.24 Aligned_cols=346 Identities=17% Similarity=0.169 Sum_probs=240.0
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEc--CChHH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLT--LGCSQ 84 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~--~g~~~ 84 (387)
.+++|+..|--+.+..-| +-+.|++|-++....+....|-+..|.+++.+..++++-.......+.++|+.+ -++|.
T Consensus 52 ~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTG 131 (427)
T KOG1411|consen 52 PKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTG 131 (427)
T ss_pred cceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcc
Confidence 366777777554444444 778888888887776556789999999999999999885433333345567654 56788
Q ss_pred HHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC-ceEEEEeC--CCC
Q 038416 85 AIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN-TVAIVIIN--PGN 159 (387)
Q Consensus 85 a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~l~~--p~n 159 (387)
++.+....|. -++..|.++.|+|.+...... ..|+.+..+.......-++|.+.+.+-+..- ...+++.+ .||
T Consensus 132 aLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~--~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHN 209 (427)
T KOG1411|consen 132 ALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFK--DAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHN 209 (427)
T ss_pred hhhHHHHHHHhhccccceeecCCcccccCcccc--ccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcC
Confidence 8888877764 468899999999999999999 9999987776543444577877766555331 12233443 499
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC--CccccccC-CCccEEEEecCcccccccccceEEE--Ee
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP--YVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWL--VT 234 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~--~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i--~~ 234 (387)
|||+-.+.+++++|.++.++.+.+-++|-+|++|.-+.-. ...++.+. ...++++..|++|.+|+-|-|+|.+ ++
T Consensus 210 PTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc 289 (427)
T KOG1411|consen 210 PTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVC 289 (427)
T ss_pred CCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEe
Confidence 9999999999999999999999999999999997644311 11122221 2345788899999999999999985 55
Q ss_pred eCCCCcccchhHHHHHHh----h-hhccCCcchHHHHHHHHHhhhcc--HHHH---HHHHHHHHHHHHHHHHHhhcC--C
Q 038416 235 SDPNGILQNSGFVDSIKG----C-LNAASHPVTFIQAAVPRIVDETN--EAFF---AKIIGLLKETADICYERIKEI--P 302 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~--~~~~---~~~~~~~~~~~~~~~~~l~~~--~ 302 (387)
.++ +...++.. . +...++|+..+...+..+|++.. .+|+ +-+.+++...|..+.+.|+.. +
T Consensus 290 ~~a-------d~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~ 362 (427)
T KOG1411|consen 290 KDA-------DEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSP 362 (427)
T ss_pred cCH-------HHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCC
Confidence 442 33333332 2 22445677777888888888743 3333 445577777777787877763 1
Q ss_pred -CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHH
Q 038416 303 -CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 303 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~ 380 (387)
+|..+ ..+-|+|++..+. .+.++.+.+++-|....-+ |||+ +.+...+..+.+.|.++.
T Consensus 363 ~~W~hI-~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 363 GNWSHI-TKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHAVT 423 (427)
T ss_pred ccHHHH-HHhhheeeecCCC----------HHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHhHh
Confidence 34423 4567999887664 3566778788887765321 9999 567777777777776654
Q ss_pred H
Q 038416 381 Q 381 (387)
Q Consensus 381 ~ 381 (387)
+
T Consensus 424 k 424 (427)
T KOG1411|consen 424 K 424 (427)
T ss_pred c
Confidence 3
No 300
>PRK07482 hypothetical protein; Provisional
Probab=99.81 E-value=9.3e-17 Score=151.64 Aligned_cols=352 Identities=16% Similarity=0.079 Sum_probs=207.2
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
+.|+|..-|.-.....+ .+|.+.+++++++..... +.. .....+.+..+|+.+.+..+ .+-+.+++++++++|+
T Consensus 50 ~~ylD~~sg~~~~~lGh-~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSEAv 124 (461)
T PRK07482 50 RRYIDAFAGLYCVNVGY-GRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSDAN 124 (461)
T ss_pred CEEEEcccchhhhcCCC-CCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence 35566555443233233 478899999999886421 111 01123445556666654332 2346899999999999
Q ss_pred HHHHHhhc------C-C-CCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC---cc--------
Q 038416 87 EISLSVLA------R-P-GANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR---WE-------- 135 (387)
Q Consensus 87 ~~~~~~l~------~-~-g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~---~~-------- 135 (387)
+.+++... . + ..+|+....+|++....+. +..+. .+..++.+...+ +.
T Consensus 125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 203 (461)
T PRK07482 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTG-SLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSA 203 (461)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhh-hccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHH
Confidence 99999863 1 2 2578989999998643322 01110 111122111000 00
Q ss_pred CChhhHHHhhc---cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCc
Q 038416 136 VDLDGVEALAD---ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV 210 (387)
Q Consensus 136 ~~~~~l~~~~~---~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (387)
.+++++++.+. ++..+.++..| +...|.. +|++.+++|.++|++||+++|+||++.+|...|..+.. ..++...
T Consensus 204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~-~~~gv~P 282 (461)
T PRK07482 204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGS-DHYGIEP 282 (461)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhH-HhcCCCC
Confidence 03566777663 23345566666 5566776 56778999999999999999999999998766653332 2222222
Q ss_pred cEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHH-
Q 038416 211 PVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFF- 280 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~- 280 (387)
.++ +++|.+ .+| .++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++.+
T Consensus 283 Div---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~ 350 (461)
T PRK07482 283 DLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLV 350 (461)
T ss_pred CEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence 233 467995 456 4899998875 566655421 124567899999998888876444332
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc--cCCCc----HHHHHHHHHHhcCeEEEcCCccCC
Q 038416 281 AKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML--EDIGD----DLEFCLKLAKEESVIILPGRTVGM 354 (387)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~ 354 (387)
++..+.-...++.+.+.++++|.+.. ...-|.++.+.+..... ..... ...+... +.++|+.+.++. .
T Consensus 351 ~~~~~~g~~l~~~L~~l~~~~~~v~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~~---~ 424 (461)
T PRK07482 351 GNAAEVGAYFRARLRAAFGDHPLVGE--VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAA-ALERGVIARAMP---H 424 (461)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEE--EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHH-HHHCCcEEecCC---C
Confidence 22223333333444333344543321 23456676676643110 00000 1234444 456799886531 1
Q ss_pred CCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 355 KNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 355 ~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.+|+.+ .+++++++++++.+.++++++.
T Consensus 425 ~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 425 GDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36789886 5689999999999999998753
No 301
>PRK07046 aminotransferase; Validated
Probab=99.81 E-value=5.6e-17 Score=152.44 Aligned_cols=342 Identities=14% Similarity=0.071 Sum_probs=200.6
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
..|++.+-|.-.. .++ .+|.+.+++++++.......++ .+.+..+++.+.+.. ..+.+.+++++++|+
T Consensus 75 ~~yiD~~~g~g~~--~lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~ 143 (453)
T PRK07046 75 HRYDDFCLGDTGA--MFGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDAN 143 (453)
T ss_pred CEEEEeccccccc--ccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHHH
Confidence 3456654443211 133 5689999999999865332222 244455555554432 257899999999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceee------eec--cC---CCCCccCChhhHHHhhccCceEEE
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEAR------HYD--LL---PEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~------~~~--~~---~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
+.+++... ...++|+....+|+++......+..+.... .++ +. ..-.| -|++++++.+..+..+.+
T Consensus 144 e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAav 222 (453)
T PRK07046 144 RFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAAV 222 (453)
T ss_pred HHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEEE
Confidence 99998864 233789999999998743222001000000 000 00 00001 168888888865445566
Q ss_pred EeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 154 IINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 154 l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
+..| +...|.. .+++.++++.++|++||+++|+||++. |..+-........+.+| +.+++|.+ .+|+++|.
T Consensus 223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PD-----i~t~gK~l-ggG~Pi~a 295 (453)
T PRK07046 223 LAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPD-----FLVVGKPI-AGGVPCAV 295 (453)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCcc-----ceeehhhh-cCCCccee
Confidence 6777 4445554 566779999999999999999999997 43211111111122222 33688996 46799999
Q ss_pred EEeeCCCCcccchhHHHHHHhh----------hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhc
Q 038416 232 LVTSDPNGILQNSGFVDSIKGC----------LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+++++ ++.+.+... ...+++.++++.+++.+.|+...+ +.+++..+.-...++.+.+.+.+
T Consensus 296 v~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~ 367 (453)
T PRK07046 296 YGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIAR 367 (453)
T ss_pred eeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99876 677766521 123567788888888888775432 33333334444444444444444
Q ss_pred CCCCCCCCCCCceEEEEEecCcccccCC------Cc---HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHH
Q 038416 301 IPCITCPVKPQGAMFVMVKLNVSMLEDI------GD---DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLED 371 (387)
Q Consensus 301 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~ 371 (387)
.+ +. ......|.++.+.+........ .+ ...+...+ .++||.+.|. .+.+++++.++++++++
T Consensus 368 ~~-~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~did~ 439 (453)
T PRK07046 368 HG-LP-WHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAADVDR 439 (453)
T ss_pred CC-CC-eEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHHHHH
Confidence 42 22 1112223333444421110000 01 12233444 4569998873 25678888899999999
Q ss_pred HHHHHHHHHHHhh
Q 038416 372 GLERIKAFCQRHA 384 (387)
Q Consensus 372 ~~~~l~~~~~~~~ 384 (387)
+++++.++++++.
T Consensus 440 ~~~~~~~~l~~~~ 452 (453)
T PRK07046 440 LVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 302
>PRK05965 hypothetical protein; Provisional
Probab=99.81 E-value=4.8e-17 Score=153.51 Aligned_cols=347 Identities=15% Similarity=0.121 Sum_probs=203.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.++|..-|.-.....+ .+|.+.+++++++.+... ..+. ....+.+..+++.+.+..+ .+.+.+++++++++|++
T Consensus 47 ~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 47 QLLDAFAGLWCVNVGY-GQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSDAVD 121 (459)
T ss_pred EEEECcccHHhccCCC-CCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhHHHH
Confidence 4555544332222222 478999999999886321 1110 1112334455555544332 23468999999999999
Q ss_pred HHHHhhcC-------CC-CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCC--CCccCC--------
Q 038416 88 ISLSVLAR-------PG-ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPE--KRWEVD-------- 137 (387)
Q Consensus 88 ~~~~~l~~-------~g-~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~--~~~~~~-------- 137 (387)
.+++.... ++ .+|+....+|++...... +..+. .+..++.+.. ..+.-+
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~-s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGA-GLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHH-HhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHH
Confidence 99987531 22 579999999998653222 01111 1122221110 001112
Q ss_pred hhhHHHhhcc---CceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccE
Q 038416 138 LDGVEALADE---NTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212 (387)
Q Consensus 138 ~~~l~~~~~~---~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (387)
++.+++.++. +..+.++..| +...|.. +|++.++++.++|++||+++|.||++.+|...|..+. ...++....
T Consensus 201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a-~~~~gv~PD- 278 (459)
T PRK05965 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFA-CEAEGVVPD- 278 (459)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhh-HhhcCCCCC-
Confidence 2456666642 3345555555 6666775 5777799999999999999999999999876664322 222222222
Q ss_pred EEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 213 ITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 213 ~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
|-+++|.+ .+| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+..+++.+
T Consensus 279 --iv~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l--- 344 (459)
T PRK05965 279 --LMTVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGL--- 344 (459)
T ss_pred --eEEechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccH---
Confidence 33567995 556 5999999976 676666421 124667889999888888876443332
Q ss_pred HHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEEecCcccc-c-CCC----cHHHHHHHHHHhcCeEEEcCCccCC
Q 038416 284 IGLLKETADICYERIKE---IPCITCPVKPQGAMFVMVKLNVSML-E-DIG----DDLEFCLKLAKEESVIILPGRTVGM 354 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~----~~~~~~~~ll~~~gi~v~~g~~~~~ 354 (387)
.++.++.-+++.+.|++ .|.+.. ...-|.++-+.+..... . ... ....+... +.++|+.+.+..
T Consensus 345 ~~~~~~~g~~l~~~l~~l~~~~~v~~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g---- 417 (459)
T PRK05965 345 LANGQKAGPRFAAGLDALRAHPLVGD--VRGRGLLGALELVADKATKTPFDAALDPADRIFDR-AYANGLVFRAFG---- 417 (459)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEE--EeecceEEEEEEeccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC----
Confidence 23334444444444444 332221 23446666666632110 0 000 11234443 466799997632
Q ss_pred CCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 355 KNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 355 ~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.+|+.+ ..+++++++++++|.++++++.
T Consensus 418 ~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 418 DGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 46789987 4689999999999999998753
No 303
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=1.1e-16 Score=150.64 Aligned_cols=330 Identities=15% Similarity=0.070 Sum_probs=197.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------CC-C
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------RP-G 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~~-g 97 (387)
.+|.+.+++++++.+... ........+.+..+++.+.+..+ ..-+.+++++++++|++.+++... .+ .
T Consensus 71 ~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r 146 (453)
T PRK06943 71 ANPRINAALKDQLDTLEH--AMLAGCTHEPAIELAERLAALTG--GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDK 146 (453)
T ss_pred CCHHHHHHHHHHHHhcCC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCC
Confidence 678889999999875311 11101112344455555544322 123589999999999999999862 12 3
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC--cc--------CChhhHHHhhcc--CceEEE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR--WE--------VDLDGVEALADE--NTVAIV 153 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~--------~~~~~l~~~~~~--~~~~v~ 153 (387)
.+|+....+|++....+. +..|. .+..++.+...+ +. -+++++++.++. +..+.+
T Consensus 147 ~~Ii~~~~~yHG~t~gal-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv 225 (453)
T PRK06943 147 REFVCLANGYHGETIGAL-GVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAAL 225 (453)
T ss_pred CEEEEECCCcCCCcHHhh-cccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 679999999988643222 01211 112222211100 00 124566666642 344445
Q ss_pred EeCC--CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cce
Q 038416 154 IINP--GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRL 229 (387)
Q Consensus 154 l~~p--~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~ 229 (387)
+..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+.. ..++-...++ +++|.++ +| +++
T Consensus 226 iiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~-~~~gv~PDiv---t~gKgl~-gG~~Pi 300 (453)
T PRK06943 226 IVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFAC-EQAGVWPDFL---CLSKGIS-GGYLPL 300 (453)
T ss_pred EEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHH-HhCCCCCCeE---eeehhhc-cCcccc
Confidence 5555 6667774 67788999999999999999999999998766643321 1222222233 5679964 67 599
Q ss_pred EEEEeeCCCCcccchhHHHHHHhh-------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh---
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKGC-------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK--- 299 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~--- 299 (387)
|.+++++ ++.+.+... ...+++.++++.+++.+.|+..+++.+- ++.++.-+++.+.|+
T Consensus 301 ~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~---~~~~~~G~~l~~~L~~l~ 369 (453)
T PRK06943 301 SLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVL---ARNARKSARLRAALAPLA 369 (453)
T ss_pred eEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHh
Confidence 9999976 676665421 1245677898988888888765443332 233333333333333
Q ss_pred cCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
+.+.+.. ...-|.++-+.+.....+.......+... +.++||.+.+. .+.+|+++ .++++++++++++|.
T Consensus 370 ~~~~v~~--vrG~Gl~~gvel~~~~~~~~~~~~~i~~~-~~~~Gll~~~~-----g~~l~~~Ppl~it~~eid~~~~~l~ 441 (453)
T PRK06943 370 AHPQVRH--LRQRGTIFAFDVALDGDAARTFSRRFFEA-ALERELLLRPI-----GTTVYLMPPYVLDDDEIAWLAERTR 441 (453)
T ss_pred cCCCEEe--EeccccEEEEEEccCCCcchHHHHHHHHH-HHHCCcEEEec-----CCEEEEeCCCcCCHHHHHHHHHHHH
Confidence 3444431 23446666666642111000012234444 46679998774 24699996 579999999999999
Q ss_pred HHHHHhh
Q 038416 378 AFCQRHA 384 (387)
Q Consensus 378 ~~~~~~~ 384 (387)
++++++.
T Consensus 442 ~al~~~~ 448 (453)
T PRK06943 442 ATLDATL 448 (453)
T ss_pred HHHHHHH
Confidence 9998763
No 304
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.80 E-value=4.3e-17 Score=147.92 Aligned_cols=331 Identities=16% Similarity=0.136 Sum_probs=205.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCC--cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLG--VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------RP 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~~ 96 (387)
..+++.+|+++++..-.......... ..+|-+.+++.. + +-+=++|++++|+++|++.+++... ++
T Consensus 61 ~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 61 GRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 56788899999888632211111111 344555555544 1 0225799999999999999999864 23
Q ss_pred C-CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCC-----C-CCcc----CChhhHHHhhcc---Cc
Q 038416 97 G-ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLP-----E-KRWE----VDLDGVEALADE---NT 149 (387)
Q Consensus 97 g-~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~-----~-~~~~----~~~~~l~~~~~~---~~ 149 (387)
. .+++.-..+|++...... |..|. ++..++.+. . ..+. -..++|++.+.. .+
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~-Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~ 214 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAM-SVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPET 214 (449)
T ss_pred cceEEEEeccCcCcccchhe-eccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCccc
Confidence 2 358888889986432222 12221 111222211 0 1111 235567776643 56
Q ss_pred eEEEEeCC--CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc-cccCCCccEEEEecCccccccc
Q 038416 150 VAIVIINP--GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM-GVFGSIVPVITLGSISKRWIVP 225 (387)
Q Consensus 150 ~~v~l~~p--~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~s~sK~~~~~ 225 (387)
.+.++..| +.-+|..+ |+.-++++.++|++||+++|.||+-.+|+..|+.+..- ....+| +-+++|.+..+
T Consensus 215 IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PD-----i~~~aKGLT~G 289 (449)
T COG0161 215 IAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPD-----ILCLAKGLTGG 289 (449)
T ss_pred EEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCC-----eeeeccccccc
Confidence 77778888 44478865 55559999999999999999999999999888655431 122333 44678997666
Q ss_pred ccceEEEEeeCCCCcccchhHHHHHHhh-----h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 226 GWRLGWLVTSDPNGILQNSGFVDSIKGC-----L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 226 g~r~G~i~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
-+++|.+++++ ++.+.+... . ..+++.+|.+++++.+.|+-.+++.+ .++.++...++.+.|+
T Consensus 290 Y~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l---~~~~~~~~~~l~~~L~ 358 (449)
T COG0161 290 YLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDL---LERVAEIGAYLQAGLQ 358 (449)
T ss_pred chhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHH
Confidence 78999888876 677777654 1 25678899999988888776543333 2333344444555554
Q ss_pred c----CCCCCCCCCCCceEEEEEecCcccccC--C-CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHH
Q 038416 300 E----IPCITCPVKPQGAMFVMVKLNVSMLED--I-GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 300 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~ 370 (387)
+ .|.+.. ...-|.+.-+.+....... + ......+...+.++|+.++|. .+.+=+++ .+++++++
T Consensus 359 ~~l~~~p~Vgd--VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-----g~~i~~~PPliit~~eid 431 (449)
T COG0161 359 AALADHPLVGD--VRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-----GDVIYLMPPLIITREEID 431 (449)
T ss_pred HhcccCCcEEE--eeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-----CCEEEEcCCccCCHHHHH
Confidence 4 333331 2344666666664322110 0 012334555566779999996 34555555 56999999
Q ss_pred HHHHHHHHHHHHhhh
Q 038416 371 DGLERIKAFCQRHAK 385 (387)
Q Consensus 371 ~~~~~l~~~~~~~~~ 385 (387)
++++.+++++++...
T Consensus 432 ~l~~~l~~al~~~~~ 446 (449)
T COG0161 432 ELVDALREALDETLA 446 (449)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987653
No 305
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=3e-17 Score=148.71 Aligned_cols=332 Identities=18% Similarity=0.114 Sum_probs=195.1
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEE-cCChHHHHHHHHHhhcCCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSPEDVYL-TLGCSQAIEISLSVLARPG 97 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~a~~~~~~~l~~~g 97 (387)
.++|.+++++...+.+....+|+. ..-..++++...+...+.|+...+.+.+-+ ..|++.|+.+++.+|++||
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pG 110 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPG 110 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhc
Confidence 477888888888887754444432 122345555555555555553322223322 3667889999999999999
Q ss_pred CeEEEcCCCCcchHHHhh---c-----cCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHH
Q 038416 98 ANILIPRPGYPLYEIHAA---G-----SNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~---~-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~ 168 (387)
|+|+..+..+.+...... . +....+...++++++ +..+|.+++++.+.. ++++|++.....| -+-
T Consensus 111 D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S~y~-----~~~ 184 (399)
T PF00464_consen 111 DTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICGASSYP-----RPI 184 (399)
T ss_dssp -EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE-SSTS-----S--
T ss_pred CcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEECchhcc-----Ccc
Confidence 999987766654322111 0 012346677777654 458999999997765 6777766544432 234
Q ss_pred HHHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC------CCcc
Q 038416 169 HLQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP------NGIL 241 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~------~~~~ 241 (387)
+++++.++|.+.|.++++|.+|. ++.-+|.-+.|+.. .+ ++.+|.+|. ++|.|.|.|++++. ..-.
T Consensus 185 d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKt--l~GPrggiI~~~~~~~~~~~~~~~ 257 (399)
T PF00464_consen 185 DFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKT--LRGPRGGIILTNKGSKNVDKKGKE 257 (399)
T ss_dssp -HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGG--G-SSS-EEEEES-SEEEE-TTS-E
T ss_pred CHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeecccc--ccccCceEEEEcCCccccCCcccc
Confidence 58999999999999999999998 45555555566643 33 889999998 78999999999710 0000
Q ss_pred cchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEe
Q 038416 242 QNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 242 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~ 319 (387)
.++++.+++.+... .-+++.....++++.++.......+++..+++.+|++.+.+.|.+. |+.++........++++
T Consensus 258 ~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd 336 (399)
T PF00464_consen 258 IDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVD 336 (399)
T ss_dssp EEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEE
T ss_pred cHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEE
Confidence 02467777766532 1223444444555555554334456888899999999999999998 78866555567788888
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEc----CCcc-CCCCeEEEEe------eCChHhHHHHHHH
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILP----GRTV-GMKNWLRIAF------AAEPATLEDGLER 375 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~----g~~~-~~~~~~Ri~~------~~~~e~~~~~~~~ 375 (387)
+..... + ...+...|++.||.++. +..- .....+||+. +..++++.++.+.
T Consensus 337 ~~~~~~----~-g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 337 LRSFGI----D-GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp GGGGTS------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred eccccc----c-hHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 764322 3 34556677999999874 3311 1146799999 2356777766554
No 306
>PRK06105 aminotransferase; Provisional
Probab=99.80 E-value=1.7e-16 Score=149.75 Aligned_cols=348 Identities=17% Similarity=0.113 Sum_probs=203.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
..++|..-|.......+ .+|.+.+|+++++.+... ...+ ....+.+.++++.+.+..+ .+-+.+++++++++|+
T Consensus 48 ~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAv 122 (460)
T PRK06105 48 KRYIEGMAGLWSVALGF-SEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSEAN 122 (460)
T ss_pred CEEEEcchhHHhccCCC-CCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHH
Confidence 34555544432222222 478899999999876321 1111 1123444455555544332 2346899999999999
Q ss_pred HHHHHhhc------C-CC-CeEEEcCCCCcchHHHhhccCCCce------------eeeeccCCCCCcc-----------
Q 038416 87 EISLSVLA------R-PG-ANILIPRPGYPLYEIHAAGSNNNLE------------ARHYDLLPEKRWE----------- 135 (387)
Q Consensus 87 ~~~~~~l~------~-~g-~~vl~~~p~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~----------- 135 (387)
+.+++... . +| .+|+....+|++...... +..+.+ +..++.+....+.
T Consensus 123 e~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~-s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 201 (460)
T PRK06105 123 DTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASA-SLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFAT 201 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhhe-eccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHH
Confidence 99999842 1 23 578888889987653332 011111 1112211100000
Q ss_pred CChhhHHHhhc---cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCc
Q 038416 136 VDLDGVEALAD---ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV 210 (387)
Q Consensus 136 ~~~~~l~~~~~---~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (387)
...+++++.+. ++..+.++..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+. ...++...
T Consensus 202 ~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~-~~~~~v~P 280 (460)
T PRK06105 202 RLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFG-CETFGIKP 280 (460)
T ss_pred HHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhh-HHhcCCCC
Confidence 01345666653 23445566666 6666775 5788899999999999999999999998866665332 22222221
Q ss_pred cEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 211 PVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
. |.+++|.++...+++|.+++++ ++.+.+... ...+++.++.+.+++.+.|+...++.
T Consensus 281 D---i~~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~--- 346 (460)
T PRK06105 281 D---ILVMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERD--- 346 (460)
T ss_pred C---eeeeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhcc---
Confidence 2 4478899654336899999976 676666431 12456788888888888777644332
Q ss_pred HHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEEecCcccc--cCCC---c-HHHHHHHHHHhcCeEEEcCCccC
Q 038416 283 IIGLLKETADICYERIKE---IPCITCPVKPQGAMFVMVKLNVSML--EDIG---D-DLEFCLKLAKEESVIILPGRTVG 353 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~---~-~~~~~~~ll~~~gi~v~~g~~~~ 353 (387)
..++.++..+++.+.|++ +|.+..+ ..-|.++-+.+..... .... . ...+.. .+.++|+.+.+.
T Consensus 347 l~~~v~~~g~~l~~~L~~l~~~~~v~~v--rG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~-~~~~~Gvl~~~~---- 419 (460)
T PRK06105 347 LVGNAAERGARLQARLRALADHPLVGEV--RGVGLIAAVELVADKATKTPFEPPGKVGARANA-AAHEHGVISRAM---- 419 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEE--EecceEEEEEEecCcccCCCCCchhHHHHHHHH-HHHHCCeEEEec----
Confidence 334444444444444443 4322211 2346666666532110 0000 0 123444 446779999874
Q ss_pred CCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 354 MKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 354 ~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.+|+++. +++++++++++++.++++++.
T Consensus 420 -g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 420 -GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred -CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 368999984 589999999999999998764
No 307
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.80 E-value=1.6e-16 Score=149.31 Aligned_cols=331 Identities=15% Similarity=0.112 Sum_probs=196.6
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------C-C
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------P-G 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~-g 97 (387)
.+|.+.+++++++.+-. +++......+.+..+++.+.+..+ ...+.+++++++++|++.+++.... + .
T Consensus 66 ~~p~v~~ai~~ql~~l~--~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r 141 (445)
T PRK09221 66 GRPEIVEAVARQAATLD--YAPAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTR 141 (445)
T ss_pred CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 67888899999987521 111111112334445555544332 2246899999999999999987531 1 2
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCC---CCCccC--------ChhhHHHhhcc---CceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLP---EKRWEV--------DLDGVEALADE---NTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~---~~~~~~--------~~~~l~~~~~~---~~~~ 151 (387)
.+|+....+|++....+. +..|. .+..++.+. ...+.. ..+.+++.++. +..+
T Consensus 142 ~~ii~~~~~yHG~t~gal-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iA 220 (445)
T PRK09221 142 TRLIGRERGYHGVGFGGI-SVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIA 220 (445)
T ss_pred cEEEEECCCcCccchhhh-ccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 579999999987643322 01111 112222210 000000 13466666642 3344
Q ss_pred EEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccc
Q 038416 152 IVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 152 v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
.++..| +...|.. .|.+.++++.++|++||+++|+||++.+|+..|..+.. .....+| +.+++|.++...++
T Consensus 221 avi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD-----i~~~gK~l~gG~~P 295 (445)
T PRK09221 221 AVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD-----IITFAKGLTNGAIP 295 (445)
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC-----EEEeccccccCccc
Confidence 455555 6667885 56677999999999999999999999987655543221 1122222 34788996444378
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+|.+++++ ++.+.+... ...+++.++++..++.+.|+...++ ...++.+++.+++++.|++
T Consensus 296 i~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~ 364 (445)
T PRK09221 296 MGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHS 364 (445)
T ss_pred ceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHh
Confidence 99998875 666655321 1235667888888877777654333 2345666666677776665
Q ss_pred CCCCCCCC-CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 301 IPCITCPV-KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 301 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
+.....+. ...-|.+..+.+............++...+ .++||.+.++ .+.+|+++ ..+++++++++++|+
T Consensus 365 l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l~ 438 (445)
T PRK09221 365 LKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYT-----GDTIALSPPLIIEKAQIDELVDALG 438 (445)
T ss_pred hccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeec-----CCEEEEECCccCCHHHHHHHHHHHH
Confidence 42211111 122355555555321110001123455554 5679998764 36799997 468999999999999
Q ss_pred HHHHHh
Q 038416 378 AFCQRH 383 (387)
Q Consensus 378 ~~~~~~ 383 (387)
++++++
T Consensus 439 ~~l~~~ 444 (445)
T PRK09221 439 DALRAV 444 (445)
T ss_pred HHHHhh
Confidence 999764
No 308
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.80 E-value=9.4e-17 Score=149.86 Aligned_cols=322 Identities=15% Similarity=0.130 Sum_probs=196.9
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC------C-CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR------P-GA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~------~-g~ 98 (387)
.+|.+.+++++++.+....... ....+.+..+++.+.+..+ .+.+.+++++++++|++.+++.... . ..
T Consensus 60 ~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~ 135 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQ 135 (428)
T ss_pred CCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCc
Confidence 4688999999998763211111 1123445556665554332 2346899999999999999987542 2 36
Q ss_pred eEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCC-C--c-cCChhhHHHhhcc--CceEEEEeCC--
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEK-R--W-EVDLDGVEALADE--NTVAIVIINP-- 157 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~--~-~~~~~~l~~~~~~--~~~~v~l~~p-- 157 (387)
+|+....+|++....+. +..+. .+..++..... + + .-|++++++.++. ...+.++..|
T Consensus 136 kii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~ 214 (428)
T PRK07986 136 RFLTLRHGYHGDTFGAM-SVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIV 214 (428)
T ss_pred EEEEECCCcCCCcHhhh-cccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechh
Confidence 89999999987543322 01121 01112211000 0 0 1145667776642 2344555555
Q ss_pred CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccc-cceEEEEe
Q 038416 158 GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPG-WRLGWLVT 234 (387)
Q Consensus 158 ~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~ 234 (387)
+...|.. ++++.+++|.++|++||+++|+||++.++...|..+.. .....+| ++ +++|.++ .| +++|.+++
T Consensus 215 ~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD---i~--t~gK~l~-gG~~p~~av~~ 288 (428)
T PRK07986 215 QGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD---IL--CLGKALT-GGTMTLSATLT 288 (428)
T ss_pred cCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC---EE--Eechhhh-CCcccCcchhc
Confidence 5556664 56688999999999999999999999887655543221 1122222 33 5899974 66 58999888
Q ss_pred eCCCCcccchhHHHHHHhh------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC---CCCC
Q 038416 235 SDPNGILQNSGFVDSIKGC------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI---PCIT 305 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~ 305 (387)
++ ++.+.+... ...+++.++++.+++.+.|+...+. ...++++++.+++++.|+++ +.+.
T Consensus 289 ~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~ 357 (428)
T PRK07986 289 TR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVA 357 (428)
T ss_pred hH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 76 677776542 1245667888888888877754332 23444555555555555543 3222
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
. ...-|.+..+.+..+ .....+...+ .++|+.+.+. .+.+|+.+ .++++++++++++|.+++++
T Consensus 358 ~--vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 358 D--VRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred e--EeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 123355665555431 1233454544 6679999874 26899987 47999999999999998864
No 309
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.9e-16 Score=149.26 Aligned_cols=345 Identities=12% Similarity=0.057 Sum_probs=201.7
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.+++.+ |.- ...++ .+|.+.+++++++..-.. .+. .-..+.+..+++.+.+..+ ...+.+++++++++|++
T Consensus 73 ~ylD~~-g~~--~~~lGh~~p~v~~Ai~~ql~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve 144 (459)
T PRK06082 73 KYMDFH-GNN--VHQLGYGHPHVIEKVKEQMAKLPF--SPR-RFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSAIG 144 (459)
T ss_pred EEEEcc-cHh--hcccCCCCHHHHHHHHHHHHhCCC--ccC-ccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHHH
Confidence 455554 331 22344 788999999999875321 111 1123445555555554332 22368999999999999
Q ss_pred HHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC--cc-C------ChhhHHHh
Q 038416 88 ISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR--WE-V------DLDGVEAL 144 (387)
Q Consensus 88 ~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~-~------~~~~l~~~ 144 (387)
.+++... ....+|+....+|++....+. +..+. .+..++...... +. . .++.+++.
T Consensus 145 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (459)
T PRK06082 145 MALKLARHITGNFKVVSLWDSFHGASLDAI-SVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYV 223 (459)
T ss_pred HHHHHHHHhcCCCEEEEEeCCCcCccHHHH-hhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHH
Confidence 9998754 223688888888887543222 01221 112222110000 00 0 12456666
Q ss_pred hcc-CceEEEEeCC-CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCccc
Q 038416 145 ADE-NTVAIVIINP-GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKR 221 (387)
Q Consensus 145 ~~~-~~~~v~l~~p-~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~ 221 (387)
++. ...+.++..| ++..+..+|++.++++.++|++||+++|+||++.++...|..+.. .....+| ++ +++|.
T Consensus 224 i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD--iv---~~gKg 298 (459)
T PRK06082 224 IEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD--IL---CIGKG 298 (459)
T ss_pred HhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC--EE---Eeccc
Confidence 642 2345556666 554455678888999999999999999999999987666543221 1122222 23 48899
Q ss_pred ccccccceEEEEeeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 222 WIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 222 ~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
++...+++|.+++++ ++....... ...+++.++++.+++.+.|+...++ ...++.+++-+++.+.|++
T Consensus 299 l~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 299 LGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLE 367 (459)
T ss_pred ccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 654336999999875 443322111 1246678888888888877754332 2334444444444444443
Q ss_pred ----CCCCCCCCCCCceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHH
Q 038416 301 ----IPCITCPVKPQGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLED 371 (387)
Q Consensus 301 ----~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~ 371 (387)
+|.+.. ...-|.++.+.+.... .+.......+... +.++|+.+.+.. .+.+|+++ .++++++++
T Consensus 368 l~~~~~~i~~--vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~ 440 (459)
T PRK06082 368 MKAKYPLIGD--VRGIGLLWGVELVTDRHTKERAYDEAEAVLYR-CLNNGLSFKVSQ----GNVIQLSPPLIITREELTQ 440 (459)
T ss_pred HHhhCCCeee--eeeccceeEEEEccCccccCccHHHHHHHHHH-HHhCCCEEEecC----CCEEEEeCCCccCHHHHHH
Confidence 432221 2344666666664211 0000012234444 456799987732 47899998 468999999
Q ss_pred HHHHHHHHHHHhhh
Q 038416 372 GLERIKAFCQRHAK 385 (387)
Q Consensus 372 ~~~~l~~~~~~~~~ 385 (387)
+++++.++++++.+
T Consensus 441 ~~~~l~~~l~~~~~ 454 (459)
T PRK06082 441 ALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988754
No 310
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.5e-16 Score=148.74 Aligned_cols=326 Identities=13% Similarity=0.095 Sum_probs=198.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++.+... .....-..+.+..+++.+.... +..-+.+++++++++|++.+++.... +|
T Consensus 61 ~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r 136 (429)
T PRK06173 61 NHPRLNAAATNQLAKMSH--IMFGGFTHEPAVELAQKLLEIL--PPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQR 136 (429)
T ss_pred CCHHHHHHHHHHHHhcCC--ccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCC
Confidence 468899999998876321 1110111233444555554322 22346899999999999999987541 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCc-----cCChhhHHHhhcc--CceEEEEeCC
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRW-----EVDLDGVEALADE--NTVAIVIINP 157 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~-----~~~~~~l~~~~~~--~~~~v~l~~p 157 (387)
.+|+....+|++....+. +..+. .+..+|.+.. .+ ..+++.+++.+.. +..+.++..|
T Consensus 137 ~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EP 214 (429)
T PRK06173 137 TKFATIRSGYHGDTWHAM-SVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAIEPLQDLLEQKGDEIAALILEP 214 (429)
T ss_pred cEEEEECCCcCCcchhhh-ccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHHHHHHHHHHhCCCcEEEEEEcc
Confidence 578899999988432222 01110 0111221100 00 0135566776642 3445566666
Q ss_pred --CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccc-cceEEE
Q 038416 158 --GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPG-WRLGWL 232 (387)
Q Consensus 158 --~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i 232 (387)
+...|.. +|++.++++.++|++||+++|+||++.++...|..+.. .....+| ++ +++|.++ +| ++++.+
T Consensus 215 i~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD---iv--~~gK~l~-gG~~p~~a~ 288 (429)
T PRK06173 215 VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD---IM--CIGKALT-GGYLTLSAT 288 (429)
T ss_pred hhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC---EE--Eeehhhh-CCccccceE
Confidence 6777776 67788999999999999999999999887655543221 1122222 33 4899974 66 588888
Q ss_pred EeeCCCCcccchhHHHHHHhh------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGC------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
+.++ ++.+.+... ...++..++++.+++.+.|+...++ ...++++++.+.+++.|+++.+...
T Consensus 289 ~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~ 357 (429)
T PRK06173 289 ITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDS 357 (429)
T ss_pred EecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 8875 666666421 1124557788888888877653332 2345555555666666654322221
Q ss_pred CC-CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 307 PV-KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 307 ~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+. ....|.++-+.+... .....+...+ .++||.+.+. .+.+|+.+. .+++++++++++|.+++++.
T Consensus 358 v~~vRg~Gl~~~iel~~~-----~~~~~i~~~l-~e~Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 358 VAEVRVLGAIGVVEMKEP-----VNMATLQPRF-VEHGIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred eeeeeccceEEEEEeCCc-----ccHHHHHHHH-HHCCeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 11 123466666666431 1233455544 6679999774 268999994 68999999999999999876
Q ss_pred hh
Q 038416 384 AK 385 (387)
Q Consensus 384 ~~ 385 (387)
.+
T Consensus 427 ~~ 428 (429)
T PRK06173 427 YN 428 (429)
T ss_pred hc
Confidence 54
No 311
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.3e-16 Score=149.01 Aligned_cols=321 Identities=14% Similarity=0.109 Sum_probs=192.3
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++++.....+.. -..+.+..+++.+.+..+ ..-+.+++++++++|++.+++.... ++
T Consensus 57 ~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r 132 (422)
T PRK05630 57 GHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPER 132 (422)
T ss_pred CCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 57899999999987632111111 112334444554443222 2246899999999999999987531 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccC-C----hhhHHHhhccCceEEEEeCC--
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEV-D----LDGVEALADENTVAIVIINP-- 157 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-~----~~~l~~~~~~~~~~v~l~~p-- 157 (387)
.+|+....+|++....+. +..+. ....+|.+....... + .+.+++.+..+. +.++..|
T Consensus 133 ~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i-AAvi~EPi~ 210 (422)
T PRK05630 133 TRLLTWRSGYHGDTFAAM-SVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDETV-AAIIIEPIV 210 (422)
T ss_pred cEEEEECCCcCCccHHHh-ccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhhce-EEEEEechh
Confidence 579999999987543332 01111 112222221110000 1 234444454344 4445555
Q ss_pred CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccc-cceEEEEe
Q 038416 158 GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPG-WRLGWLVT 234 (387)
Q Consensus 158 ~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~ 234 (387)
+...|.. ++.+.++++.++|++||+++|+||++.++...|..+.. .....+| + .+++|.+ ..| .++|++++
T Consensus 211 qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD---i--~t~gK~l-~gG~~p~~av~~ 284 (422)
T PRK05630 211 QGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPD---I--MCVGKAL-TGGFMSFAATLC 284 (422)
T ss_pred cCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCC---e--eeeechh-hcCccccceeec
Confidence 6667775 56677999999999999999999999987655543221 1122222 2 2778985 345 58999998
Q ss_pred eCCCCcccchhHHHHHHhh-------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc---CCCC
Q 038416 235 SDPNGILQNSGFVDSIKGC-------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE---IPCI 304 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~ 304 (387)
++ ++.+.+... ...++..++...+++.+.|+...++.+ .++++++.+++++.|+. .|.+
T Consensus 285 ~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~v 353 (422)
T PRK05630 285 TD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMW---RKQVKRIEAELIAGLSPLAHLPGV 353 (422)
T ss_pred cH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHhhcCCCe
Confidence 76 666666421 124567888888888887776443322 33444444555554543 3322
Q ss_pred CCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
.. ...-|.++-+.+..+ .+...+... +.++|+.+.+. .+.+|+.+. .+++++++++++|.++++.
T Consensus 354 ~~--vRg~Gl~~~ie~~~~-----~~~~~~~~~-~~~~Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 354 AD--VRVLGAIGVVEMEQP-----VDMEEATQA-AVDHGVWLRPF-----GRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ee--eeccccEEEEEECCc-----ccHHHHHHH-HHHCCeEEEec-----CCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 21 123366766666431 123344444 56679998764 268899984 6899999999999998864
No 312
>PRK06062 hypothetical protein; Provisional
Probab=99.80 E-value=1.6e-16 Score=149.58 Aligned_cols=330 Identities=15% Similarity=0.092 Sum_probs=198.3
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++..... +.. .-..+.+..+++.+....+ ...+.+++++++++|++.+++... ....+|+..
T Consensus 70 ~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~ 144 (451)
T PRK06062 70 QHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSA 144 (451)
T ss_pred CCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEE
Confidence 567899999998876322 111 1123444555555544332 224689999999999999998754 223689989
Q ss_pred CCCCcchHHHhhccCC-Cc-----------eeeeeccCCCC--Ccc--CC-------hhhHHHhhcc---CceEEEEeCC
Q 038416 104 RPGYPLYEIHAAGSNN-NL-----------EARHYDLLPEK--RWE--VD-------LDGVEALADE---NTVAIVIINP 157 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~-----------~~~~~~~~~~~--~~~--~~-------~~~l~~~~~~---~~~~v~l~~p 157 (387)
..+|++....+. .. +. .+..++.+... .+. -+ ++.+++.++. +..+.++..|
T Consensus 145 ~~~yHG~t~~al--s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEP 222 (451)
T PRK06062 145 YRSYHGGTGSAI--NLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLES 222 (451)
T ss_pred eCCCCCCCHHHH--hhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEcc
Confidence 999988654433 11 10 11111111000 010 01 5667776642 3345556666
Q ss_pred -CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccc-cceEEEE
Q 038416 158 -GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPG-WRLGWLV 233 (387)
Q Consensus 158 -~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~ 233 (387)
+...|.. +|++.++++.++|++||+++|+||++.+|...|..+. ......+| +.+++|.++ .| +++|.++
T Consensus 223 v~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD-----i~t~gK~lg-gG~~Pigav~ 296 (451)
T PRK06062 223 VPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD-----LITFAKGVN-SGYVPLGGVA 296 (451)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC-----eeeechhhh-cCCcCcEEEE
Confidence 5566776 5677799999999999999999999998765554321 11122232 446889964 46 5899999
Q ss_pred eeCCCCcccchhHHHHHHhh---hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHH--HHHHHHHHHhhcCCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLK--ETADICYERIKEIPCITCPV 308 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 308 (387)
+++ ++.+.+... ...+++.++.+.+++.+.|+...++.+.++.+++. ..++.+.+..++.|.+..+
T Consensus 297 ~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~v- 367 (451)
T PRK06062 297 ISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEV- 367 (451)
T ss_pred EcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeE-
Confidence 976 677766432 12466778888888888887644433333333332 3333443333334432212
Q ss_pred CCCceEEEEEecCcccc--cCCC-------cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 309 KPQGAMFVMVKLNVSML--EDIG-------DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~--~~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
..-|.++.+.+..... .... ....+... +.++||.+.+. .+.+|+++ .+++++++++++++.
T Consensus 368 -rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~l~ 440 (451)
T PRK06062 368 -RGLGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAILD 440 (451)
T ss_pred -eccccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHHHH
Confidence 2346666666532110 0000 02234444 46679997653 36799988 568999999999999
Q ss_pred HHHHHhh
Q 038416 378 AFCQRHA 384 (387)
Q Consensus 378 ~~~~~~~ 384 (387)
++++++.
T Consensus 441 ~~l~~~~ 447 (451)
T PRK06062 441 AALAVAD 447 (451)
T ss_pred HHHHHhh
Confidence 9998765
No 313
>PLN03032 serine decarboxylase; Provisional
Probab=99.80 E-value=3.8e-16 Score=142.26 Aligned_cols=310 Identities=14% Similarity=0.064 Sum_probs=202.3
Q ss_pred HHHHHHHHHhcCCCCC---CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEcCChHHHHHHHHHhhc--CCCCeEE
Q 038416 29 VAEDAVVDALRTAHYN---CYSPTLGVPSARRGIADYLNRDLPYKLSPEDV--YLTLGCSQAIEISLSVLA--RPGANIL 101 (387)
Q Consensus 29 ~v~~a~~~~~~~~~~~---~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~--~~g~~vl 101 (387)
...+++.+...+...+ .+.......++++.+.+++.+.++ .+++++ ++|+|+|+++..++.+.. .++..|+
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 4577777766542111 111112346667777777766665 345665 899999999998887754 2456899
Q ss_pred EcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 102 IPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
++.-.|+++...++ .+|.++..+|++. ++.+|+++|++++++ .+.+|+++..+|++|.+-| +++|+++|+
T Consensus 116 ~s~~~H~Sv~kaa~--~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~ 188 (374)
T PLN03032 116 ASRESHYSVFKAAR--MYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILK 188 (374)
T ss_pred eCCCceeHHHHHHH--HcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHH
Confidence 99999999999999 8999888888753 447999999999976 3667788888999999955 888888898
Q ss_pred hcC-----cEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 179 NLG-----IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 179 ~~~-----~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
++| +++++|.+++++...-....+...+.. .-..+..|.+|.++ ....+|.++.++ ...+.+...
T Consensus 189 ~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~-~vDSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~~ 258 (374)
T PLN03032 189 ELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRK-PIGSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQN 258 (374)
T ss_pred HhCCCCCCeeEEEEccchhhhhhccCCCcccCCCc-CCcEEEECcccccC-CCcCeEEEEEEc--------hhhHhhccC
Confidence 986 589999999864321100001001111 11245668999955 235589999986 233333211
Q ss_pred h------hccCCcch--HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 254 L------NAASHPVT--FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 254 ~------~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
. ..+...+. .....+-..|.....+.+.++.++..++++++.+.|++. ++..+..|... .+.++-+
T Consensus 259 ~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~---- 332 (374)
T PLN03032 259 VEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERP---- 332 (374)
T ss_pred CcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCC----
Confidence 0 11112222 233344444555667888999999999999999999987 67756556543 3332222
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKA 378 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~ 378 (387)
.... + . .|..+.+- .+++|+++ ..+++.+++.++.|++
T Consensus 333 ----~~~~----~-~-~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 333 ----MDEA----F-I-KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ----CcHh----H-h-heeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1111 2 2 25555542 35899999 4577889988888764
No 314
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.5e-16 Score=136.84 Aligned_cols=329 Identities=17% Similarity=0.119 Sum_probs=221.1
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~ 98 (387)
-+++.|.+|+-+.+.+...-+||. -.-..+++....+..++.|+ .+..+|...+ +++|+.+++.+|++|||
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhS-Gs~AN~av~~All~pGD 113 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHS-GSQANQAVYLALLQPGD 113 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCC-chHHHHHHHHHHcCCCC
Confidence 378889999999888765545543 22234555666666666565 3445666555 56789999999999999
Q ss_pred eEEEcCCCCcchHHHh-hccCCC--ceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHH
Q 038416 99 NILIPRPGYPLYEIHA-AGSNNN--LEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~ 174 (387)
+|+-.+-.+.+..... ..+..| .+++.++++++ +..+|.|++++.+.. ++++|+.-.... .-.-+++++.
T Consensus 114 timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~SaY-----~r~id~~~~r 187 (413)
T COG0112 114 TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGSAY-----SRPIDFKRFR 187 (413)
T ss_pred eEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECcccc-----ccccCHHHHH
Confidence 9997766666544333 222344 35566676654 457999999997754 566666433222 2223488889
Q ss_pred HHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 175 RTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
++|.+.|.++++|-+|- ++.-+|..+.|+.. .+ ++.+|.+|+ ++|.|-|.|++++ .++.+++.+.
T Consensus 188 eIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--Ad---vVTtTTHKT--lrGPrGG~Il~~~-------eel~kkin~a 253 (413)
T COG0112 188 EIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--AD---VVTTTTHKT--LRGPRGGIILTND-------EELAKKINSA 253 (413)
T ss_pred HHHHHhCceEEehHHHHHHHHhcccCCCCCCc--cc---eEeCCcccC--CCCCCceEEEecc-------HHHHHHhhhh
Confidence 99999999999999998 55555655555544 22 889999998 7899989998864 2577777654
Q ss_pred hh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcH
Q 038416 254 LN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDD 331 (387)
Q Consensus 254 ~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 331 (387)
-. .-+++.....++.+-++.+..+..+++..+++.+|++.+.+.|.+. |+.++........+.+++..... .
T Consensus 254 VFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~-----~ 327 (413)
T COG0112 254 VFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGL-----T 327 (413)
T ss_pred cCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCC-----C
Confidence 22 1223333444444444554445667888999999999999999987 78866544555566677763211 3
Q ss_pred HHHHHHHHHhcCeEEEcCCcc-C-----CCCeEEEEe------eCChHhHHHHHHHHHHHHHH
Q 038416 332 LEFCLKLAKEESVIILPGRTV-G-----MKNWLRIAF------AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~-~-----~~~~~Ri~~------~~~~e~~~~~~~~l~~~~~~ 382 (387)
...+..+|.+.||.++-.... . .+..+||+. +..++++.+..+.|.+++..
T Consensus 328 Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 328 GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 456677779999998843322 2 146799998 23567888888888777764
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.79 E-value=2.6e-16 Score=148.58 Aligned_cols=349 Identities=15% Similarity=0.094 Sum_probs=197.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPT-LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.++|+.-|.......+ .+|.+.+++++++..-.. ++.. .+..+....+++.+....+ ...+.++++++|++|++
T Consensus 55 ~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 55 RYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANE 129 (460)
T ss_pred EEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHH
Confidence 4556544433233344 679999999999876321 1111 1223334444444433222 22368999999999999
Q ss_pred HHHHhhc-------CCCC-eEEEcCCCCcchHHHhhccCCCce-----------eeeeccCCC--CCccC--------Ch
Q 038416 88 ISLSVLA-------RPGA-NILIPRPGYPLYEIHAAGSNNNLE-----------ARHYDLLPE--KRWEV--------DL 138 (387)
Q Consensus 88 ~~~~~l~-------~~g~-~vl~~~p~~~~~~~~~~~~~~g~~-----------~~~~~~~~~--~~~~~--------~~ 138 (387)
.+++... ++++ .|+....+|++...... +..+.+ +..+|.+.. .++.. +.
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~-s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAAT-ALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAA 208 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhh-hcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHH
Confidence 9999874 1223 45566677876533222 022211 112221100 00011 12
Q ss_pred hhHHHhhc---cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccE
Q 038416 139 DGVEALAD---ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPV 212 (387)
Q Consensus 139 ~~l~~~~~---~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~ 212 (387)
+.+++.+. ++..+.++..| +...|.. .|.+.++++.++|++||+++|+||++.+|...|..+.. ...+.+| +
T Consensus 209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD--i 286 (460)
T PRK12403 209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD--T 286 (460)
T ss_pred HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC--e
Confidence 44555442 23344555666 5666775 56777999999999999999999999988766653331 1122222 2
Q ss_pred EEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh-----hhccCCcchHHHHHHHHHhhhccHHHH-HHHH-
Q 038416 213 ITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC-----LNAASHPVTFIQAAVPRIVDETNEAFF-AKII- 284 (387)
Q Consensus 213 ~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~- 284 (387)
+ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++.+.+++.+.|+..+++.+ .+..
T Consensus 287 v---~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~ 354 (460)
T PRK12403 287 L---SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKD 354 (460)
T ss_pred E---EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3 488995 446 4899998865 566666421 123566888899888888876443322 2222
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc--cCCCcH---HHHHHHHHHhcCeEEEcCCccCCCCeEE
Q 038416 285 GLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML--EDIGDD---LEFCLKLAKEESVIILPGRTVGMKNWLR 359 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~R 359 (387)
+.-...++.+.+..+++|.+.. ...-|.++.+.+..... ...... ...+...+.++|+.+.+. .+.+|
T Consensus 355 ~~g~~l~~~L~~l~~~~~~i~~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~~~~~ 427 (460)
T PRK12403 355 DTGPYLQRCLREVFGDHPLVGE--VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-----LGRMI 427 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCEEe--EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec-----CCEEE
Confidence 2233333444333344542221 23446666666632110 000010 111223345679999763 24588
Q ss_pred EEeeC--ChHhHHHHHHHHHHHHHHhh
Q 038416 360 IAFAA--EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 360 i~~~~--~~e~~~~~~~~l~~~~~~~~ 384 (387)
+++.. ++++++++++.+.++++++.
T Consensus 428 l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 428 MAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99854 99999999999999998874
No 316
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=2.3e-16 Score=148.74 Aligned_cols=350 Identities=14% Similarity=0.058 Sum_probs=207.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC---CCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK---LSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~---~~~~~i~~~~g~~~a 85 (387)
.+++..-|.-.....+ .+|.+.++++++++.-.. .....-..+.+..+++.+....+.. .+-+.+++++++++|
T Consensus 65 ~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEA 141 (472)
T PRK08742 65 RYLDAVSSWWTNLFGH-AEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAG 141 (472)
T ss_pred EEEEcCccHHhccCCC-CCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHH
Confidence 4555544432222222 578899999998864211 1111111244556666655433211 123589999999999
Q ss_pred HHHHHHhhcC-------C-CCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCC--CccC-------
Q 038416 86 IEISLSVLAR-------P-GANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEK--RWEV------- 136 (387)
Q Consensus 86 ~~~~~~~l~~-------~-g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--~~~~------- 136 (387)
++.+++.... + ..+|+....+|++....+. +..+. ++..+|.+... .++.
T Consensus 142 vE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gal-s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 220 (472)
T PRK08742 142 VEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGAL-AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220 (472)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhh-hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHH
Confidence 9999998631 2 2689999999998654433 01111 11112211100 0011
Q ss_pred -ChhhHHHhhc--cCceEEEEeCC--CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCc
Q 038416 137 -DLDGVEALAD--ENTVAIVIINP--GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV 210 (387)
Q Consensus 137 -~~~~l~~~~~--~~~~~v~l~~p--~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (387)
+++.+++.++ ++..+.++..| ++..|. .+|++.++++.++|++||+++|.||++.+|...|..+.. ..++...
T Consensus 221 ~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~-e~~gv~P 299 (472)
T PRK08742 221 QAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFAC-EQAGVMP 299 (472)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHH-HhcCCCC
Confidence 2455666664 23445566666 566677 467788999999999999999999999998766653322 1222222
Q ss_pred cEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh-------hhccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 211 PVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC-------LNAASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
. |-+++|.+ .+| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+..+++.+.+
T Consensus 300 D---iv~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~ 367 (472)
T PRK08742 300 D---LLCLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIA 367 (472)
T ss_pred C---EEEEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHH
Confidence 2 33567995 456 4899999976 666655321 12456788999998888887655544444
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc--CCC-c---HHHHHHHHHHhcCeEEEcCCccCCCC
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE--DIG-D---DLEFCLKLAKEESVIILPGRTVGMKN 356 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~ 356 (387)
+.+++.+..+.+.+.++++|.+.. ...-|.++-+.+...... ... + ...+... +.++||.+.+. .+
T Consensus 368 ~~~~~g~~l~~~~~~~~~~~~i~d--vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~-----g~ 439 (472)
T PRK08742 368 RNQPTAARMTQLAAQIGEHPHVAD--VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRA-ALARGVVLRPL-----GD 439 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeee--EeccceEEEEEeccCccccccCCchhHHHHHHHHH-HHHCCeEEEec-----CC
Confidence 444444333334444555554332 234566666666321110 000 0 1233343 45679999874 36
Q ss_pred eEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 357 WLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 357 ~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+|+.+. .+++++++++++|.+++++.
T Consensus 440 vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 440 VLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8999994 68999999999999999875
No 317
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=2.8e-17 Score=153.14 Aligned_cols=281 Identities=16% Similarity=0.116 Sum_probs=200.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-----C---
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-----P--- 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~--- 96 (387)
.+++.+.+++...+..+ ........+..++++.+..++.+.++.+ ....=.+|+|+|+++..++.+... .
T Consensus 73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 46667777777777654 3233334467899999999999988765 444567899999999988887531 1
Q ss_pred C------CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceE--EEEeCCCCCccccCCHH
Q 038416 97 G------ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA--IVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 97 g------~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--v~l~~p~nptG~~~~~~ 168 (387)
+ .+|+++.-.|+++...+. .+|++...+++.+. ++.+|++++++++++++.. |+-+.++.++|.+ +
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~--~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---D 224 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAAR--YLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---D 224 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHH--HhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---C
Confidence 1 169999999999999999 99999999998765 6799999999999988877 8888889999999 7
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|.++|+++++++++|.+++++...-........+.-..-.-+..+++|. +..-+.+||++.+|++ .+.+
T Consensus 225 di~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~ 297 (460)
T COG0076 225 DIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE------ALRR 297 (460)
T ss_pred CHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccc-cCCCCCceEEEEECHH------Hhhh
Confidence 79999999999999999999999876421111111011111112344589999 6777889999999853 2333
Q ss_pred HHHh--hhh-------c--cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 249 SIKG--CLN-------A--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 249 ~~~~--~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
.+.. +.. + .++-+.....+....+...+.+.+.+..++..++++.+.+.|++.+.++.+..|. .+.+.
T Consensus 298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~ 376 (460)
T COG0076 298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVA 376 (460)
T ss_pred hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEE
Confidence 3321 110 0 1111121333344445555568889999999999999999999997788775564 55666
Q ss_pred EecC
Q 038416 318 VKLN 321 (387)
Q Consensus 318 ~~~~ 321 (387)
++++
T Consensus 377 fr~~ 380 (460)
T COG0076 377 FRLK 380 (460)
T ss_pred EEcC
Confidence 6664
No 318
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3e-16 Score=147.73 Aligned_cols=332 Identities=16% Similarity=0.139 Sum_probs=192.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.+... ........+.+..+++.+.+.. +...+.+++++++++|++.+++... ....+|+..
T Consensus 70 ~~p~i~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~ 145 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQH--SMIGYTHSERAIRVAEKLAEIS--PIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAF 145 (457)
T ss_pred CCHHHHHHHHHHHHhccc--cccCccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEE
Confidence 677899999999875311 1111111233344555554432 2223689999999999999998864 233679999
Q ss_pred CCCCcchHHHhhccCCC--------c-----eeeeeccCCCCC--cc----CCh--------hhHHHhh-----ccCceE
Q 038416 104 RPGYPLYEIHAAGSNNN--------L-----EARHYDLLPEKR--WE----VDL--------DGVEALA-----DENTVA 151 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g--------~-----~~~~~~~~~~~~--~~----~~~--------~~l~~~~-----~~~~~~ 151 (387)
..+|++....+. +..+ . ++..+|.+.... +. .+. +.+++.+ .++..+
T Consensus 146 ~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iA 224 (457)
T PRK05639 146 IGAYHGQTLGAT-SVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVA 224 (457)
T ss_pred CCCcCCccHHHH-HHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceE
Confidence 999988654322 0111 1 122333221100 00 012 2344433 133445
Q ss_pred EEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccc
Q 038416 152 IVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 152 v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
.++..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+.. .....+| ++ .++|.+ .+|++
T Consensus 225 AvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD---iv--~~gK~l-~gG~p 298 (457)
T PRK05639 225 ALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPD---LI--IFGKGV-ASGMG 298 (457)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCC---EE--Eechhh-cCCCc
Confidence 556666 6666774 56778999999999999999999999987655543221 1122222 32 378996 45789
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCC
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCI 304 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~ 304 (387)
+|.+++++ ++.+........++..++...+++.+.|+...++.+ .+...++-+++++.|++ .+-+
T Consensus 299 i~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~ 367 (457)
T PRK05639 299 LSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLEIIEEENL---LKNALKVGEFIKKRLLEMKESFEVI 367 (457)
T ss_pred ceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHccH---HHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 99999976 555522111123556788888887777775443322 23333344444444443 4322
Q ss_pred CCCCCCCceEEEEEecCccc-ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSM-LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
.. ...-|.++.+.+..+. .+.......+... +.++|+.+.+... ..+.+|+.+. +++++++++++.|.++++
T Consensus 368 ~~--VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~g~--~~~~lr~~Ppl~it~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 368 GD--VRGKGLMIGVEIVKENGKPDPELTGKICWR-AFELGLILPSYGM--FGNVIRITPPLVITKEIAEKGLEIMERAIK 442 (457)
T ss_pred Ee--eccceeEEEEEEecCCCCCCHHHHHHHHHH-HHhCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 21 2344666666653211 1100012234444 4567999876421 1478999994 689999999999999998
Q ss_pred Hhh
Q 038416 382 RHA 384 (387)
Q Consensus 382 ~~~ 384 (387)
+..
T Consensus 443 ~~~ 445 (457)
T PRK05639 443 DAL 445 (457)
T ss_pred HHH
Confidence 764
No 319
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.79 E-value=5.9e-17 Score=133.98 Aligned_cols=324 Identities=14% Similarity=0.145 Sum_probs=208.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC--------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS--------PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~--------~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
-++++.++|+.+.-..=....|- .-+-...+.+.+++|+ .-|.+-+|+|+.++=++++++++++
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~ 99 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE 99 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence 47888888877754321000010 0112345667788888 4588899999999999999999999
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-------CceEEEEeCCCCCccccCCHHH
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-------NTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~l~~p~nptG~~~~~~~ 169 (387)
||.|++...+|+.....+. +.|+++..+|-.....+.++++...+.++. .+.+.+++++...-|.+ .+
T Consensus 100 gd~vV~D~~aHYttyvAAE--ragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~D 174 (382)
T COG1103 100 GDWVVVDSLAHYTTYVAAE--RAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---AD 174 (382)
T ss_pred CCEEEEcCcchHHHHHHHH--hcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hh
Confidence 9999999999998888888 999999999865555688898876665532 35667888887667777 56
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
-+.++++|++++++++...+|.. |..+.+......+ ++++|-+|++ .+..++|.+-.+. +|.+.
T Consensus 175 akkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~~~e--------E~ae~ 238 (382)
T COG1103 175 AKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLAMSE--------EWAEI 238 (382)
T ss_pred hHHHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEeehh--------HHHHH
Confidence 89999999999999999999986 4445555556555 9999999995 5666899998865 56655
Q ss_pred HHhhhhccC--------CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 250 IKGCLNAAS--------HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 250 ~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
.-+.....+ +.+..+.-.+..+-....-...-++++.--+..+.+.+.|+.+.|+... ....-..-.+.|.
T Consensus 239 V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~ql-G~rPk~HdLm~Fe 317 (382)
T COG1103 239 VLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQL-GERPKNHDLMKFE 317 (382)
T ss_pred HHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHh-CCCCcccceeeec
Confidence 543221000 0111111111111111000111222223334555677788887655533 2111112223333
Q ss_pred cccccCCC----c-HHHHHHHHHHhcCeE-EEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHHHHh
Q 038416 322 VSMLEDIG----D-DLEFCLKLAKEESVI-ILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 322 ~~~~~~~~----~-~~~~~~~ll~~~gi~-v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+.+-.++ . ..-+..+| +++||. +.|| ...+|.+|+ +.+.|+++..++.++++++++
T Consensus 318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CchHHHHHHhCcCCceeeHHHH-HhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 32211000 0 11134444 677876 4455 368999999 789999999999999998875
No 320
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.79 E-value=1e-15 Score=140.25 Aligned_cols=307 Identities=16% Similarity=0.123 Sum_probs=196.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH-hhccCCCcee
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH-AAGSNNNLEA 123 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~-~~~~~~g~~~ 123 (387)
.|.....+.+|++.+++++ ..+.++.|++++.|+.++....+++||.| +...|...... .. ..|..+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~--~~Ga~f 140 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQE--LNGGIF 140 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHH--hCCcEE
Confidence 4777778899999999999 34679999999999999877778999964 55555544333 55 667754
Q ss_pred eeeccC--------CCCCccCChhhHHHhhccC----ceEEEEeCCCCCc-cccCCHHHHHHHHHHHHhcCcEEeecccc
Q 038416 124 RHYDLL--------PEKRWEVDLDGVEALADEN----TVAIVIINPGNPC-GNVFSYQHLQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 124 ~~~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~l~~p~npt-G~~~~~~~~~~l~~~~~~~~~~li~D~~~ 190 (387)
..+..+ ...++.+|++.+++++++. +..+.+.+++|.. |+..|.++++++.++|++||+.||+|.++
T Consensus 141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAr 220 (460)
T PRK13237 141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATR 220 (460)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcc
Confidence 444211 1234679999999998753 3456777777766 79999999999999999999999999998
Q ss_pred ccc----c------cCCCCCc----cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-
Q 038416 191 NHL----A------FGSTPYV----PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN- 255 (387)
Q Consensus 191 ~~~----~------~~~~~~~----~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~- 255 (387)
..- . +.+.... .+.++. ...+.|++|.++.+- .|++++++ +++.++++...-
T Consensus 221 a~gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~ 287 (460)
T PRK13237 221 CVENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVV 287 (460)
T ss_pred hhcChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccc
Confidence 732 1 2221111 011121 266778999976542 37777765 468888876631
Q ss_pred ---c-c-CCcchHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc--ccccC
Q 038416 256 ---A-A-SHPVTFIQAAVPRIVDE-TNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV--SMLED 327 (387)
Q Consensus 256 ---~-~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 327 (387)
+ + ++.+.--..+++..|.+ ..+.++..+.+ +.+++.+.|.+. |+.++ .|.+|.-++++... +.+|.
T Consensus 288 ~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~----~~~~l~~~L~~~-Gvpv~-~p~ggH~v~vda~~~lph~~~ 361 (460)
T PRK13237 288 YEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVG----QVRYLGEKLLAA-GVPIV-EPVGGHAVFLDARRFLPHLPQ 361 (460)
T ss_pred cCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHH----HHHHHHHHHHHC-CCcee-cCCCceEEEEEhHHhCCCCCc
Confidence 1 1 11112123333333332 22344444444 455666777666 78745 78888888775432 11111
Q ss_pred -CCcHHHHHHHHHHhcCeEEE-cCCcc-CC-----------CCeEEEEee---CChHhHHHHHHHHHHHHHH
Q 038416 328 -IGDDLEFCLKLAKEESVIIL-PGRTV-GM-----------KNWLRIAFA---AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 328 -~~~~~~~~~~ll~~~gi~v~-~g~~~-~~-----------~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~ 382 (387)
--....++.+|..+.||-.. -|+.. +. -..+|+.+. -+.+.++...++|..+.++
T Consensus 362 ~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 362 DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 11456778888888888654 22221 11 146999993 3788888888888776654
No 321
>PLN02452 phosphoserine transaminase
Probab=99.78 E-value=2.1e-16 Score=143.96 Aligned_cols=334 Identities=15% Similarity=0.041 Sum_probs=213.0
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--------HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
+++++||. ..+|+.|++++++.+.+- ..+++++ ...++-+.+.+.+++.++.+-+.+-++++.|
T Consensus 8 ~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gs 79 (365)
T PLN02452 8 VFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFLQGG 79 (365)
T ss_pred eEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEEeCc
Confidence 45677873 378999999999875431 0223332 3445555555666655554333344567788
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcc--hHHHhhccCCCceeeeeccCC-CCCccCChhhHHHhhccCceEEEEeCCC
Q 038416 82 CSQAIEISLSVLARPGANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLP-EKRWEVDLDGVEALADENTVAIVIINPG 158 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 158 (387)
+|.+++++...|+.+|+++++...+.++ +.+.++ ..|...+...... .....+++++++ .+++.+.|.+++..
T Consensus 80 gt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~--~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnE 155 (365)
T PLN02452 80 ASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAK--KYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANE 155 (365)
T ss_pred cHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH--HhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCC
Confidence 9999999999999999999988888775 345556 6665333321111 111234555542 24567888888888
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
..||+.+++ +.++. ++++|+|.+.+.. ..+.++..++ +...|..|.+|++| +|++++++..
T Consensus 156 TstGv~~~~--~~~i~------~~~lvVDa~Ss~g----~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~~~ 216 (365)
T PLN02452 156 TIHGVEFKD--YPDVG------NVPLVADMSSNFL----SKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRKDL 216 (365)
T ss_pred CCCcEecCc--ccccC------CCeEEEECCcccc----CcccCHHHcC-----EEEEecccccCCCC--eEEEEEcHHH
Confidence 899996432 44443 3899999999852 2233333333 33469999999888 7888887521
Q ss_pred Ccc---cchhHHHHHH--hhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC-
Q 038416 239 GIL---QNSGFVDSIK--GCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCP-VKP- 310 (387)
Q Consensus 239 ~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~- 310 (387)
.-. ..|.+.+.-. +..+...+|+.+..+++..+|+...++ .++.+.++.+++++++++.|++.+|+... ..+
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 000 0011111110 111233578888888888888876554 78999999999999999999987676211 111
Q ss_pred -CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 311 -QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 311 -~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
...+.+.+.++.. ....++... ++++|+...+|...-. .+|+|+ +.+.++++++++.+++.-++
T Consensus 297 ~rs~~~vsF~~~~~-----~~~~~f~~~-~~~~g~~~~~G~r~~g--g~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 297 VRSLMNVPFTLGGS-----ELEAEFVKE-AAKAGMVQLKGHRSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred HhCCeEEEEEcCCc-----hhHHHHHHH-HHHCCCcccCCccccC--ceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1333444444431 134455555 5788999999875432 399999 56889999999998887665
No 322
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=9.9e-18 Score=137.70 Aligned_cols=165 Identities=18% Similarity=0.132 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH-HHhhccCCCceeeeeccCCC
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE-IHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~-~~~~~~~~g~~~~~~~~~~~ 131 (387)
.++++.+++++. .+.+++++++|+++++..++.++.+++++|+++.++|++.. ..+. ..|.++..++.+..
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~~ 74 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAE--LAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHH--hcCCEEEEeccCCC
Confidence 578889998883 46789999999999999999999888999999999999888 7778 89999999987644
Q ss_pred CCccCChhhHHHhh-ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCc
Q 038416 132 KRWEVDLDGVEALA-DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV 210 (387)
Q Consensus 132 ~~~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (387)
.....+.+.+++.. .++++++++++++|++|...+ +++|.++|+++|+++|+|++|..+...... ... ...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~---~~~~ 147 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-VLI---PEGG 147 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-ccc---cccc
Confidence 33333333554433 467889999999999999987 488888899999999999999986654321 111 1122
Q ss_pred cEEEEecCcccccccccceEEEEe
Q 038416 211 PVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
..+++.|++|.++. .++|++++
T Consensus 148 ~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 148 ADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CCEEEEEcccccCC--CceEEEEe
Confidence 34888999999765 67899876
No 323
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.78 E-value=3.4e-16 Score=147.39 Aligned_cols=341 Identities=13% Similarity=0.087 Sum_probs=196.9
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
..|+|.+-|.-... ++ .+|.+.+++++++..... +.. ..+++..+++.+.+..+ ..+.+.+++++++|+
T Consensus 99 ~~yiD~~~g~g~~~--lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~ 168 (474)
T PLN02482 99 NEYIDYVGSWGPAI--IGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEAC 168 (474)
T ss_pred CEEEEecccccccc--cCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHH
Confidence 35556544432111 23 568999999999986432 222 12455566666655432 247999999999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhh-ccCCCceee------eeccCCC-----CCccCChhhHHHhhcc--Cce
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAA-GSNNNLEAR------HYDLLPE-----KRWEVDLDGVEALADE--NTV 150 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~------~~~~~~~-----~~~~~~~~~l~~~~~~--~~~ 150 (387)
+.+++... ...++|+....+|+++...+. .+..+.... .++.... -.+ -|++.+++.++. +..
T Consensus 169 e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~i 247 (474)
T PLN02482 169 MGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGEI 247 (474)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCce
Confidence 99998864 223689989999998653221 000111000 0000000 001 167888887753 334
Q ss_pred EEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccc
Q 038416 151 AIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 151 ~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
+.++..| ....|.+. +++.++++.++|++||+++|+||++.++. .+... ....++.... +.+++|.++ +|++
T Consensus 248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR-~g~~g-a~~~~gv~PD---i~t~gK~lg-gG~P 321 (474)
T PLN02482 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFR-IAYGG-AQEYFGITPD---LTTLGKVIG-GGLP 321 (474)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCee-cCcch-HhHHhCCCCC---EEEecchhh-CCCc
Confidence 5556666 56677765 46789999999999999999999998873 33221 1111222111 347899965 7799
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-- 302 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 302 (387)
+|.+++++ ++.+.+... ...+++.+++...++.+.|+...+. ...+++.++-+++++.|+++.
T Consensus 322 igav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~ 390 (474)
T PLN02482 322 VGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKK 390 (474)
T ss_pred eEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998875 677776521 1234557888888877777654321 234444445555555554420
Q ss_pred -CCCCCCCCCceEEEEEecCcccc--------cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHH
Q 038416 303 -CITCPVKPQGAMFVMVKLNVSML--------EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGL 373 (387)
Q Consensus 303 -~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~ 373 (387)
++........+++ .+.+..... ++......+...+ .++||.+.|... +.+ -+++.++++|+++++
T Consensus 391 ~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~---~~~-~psl~ht~~dId~~l 464 (474)
T PLN02482 391 AGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQF---EAG-FTSLAHTEEDIDFTI 464 (474)
T ss_pred cCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCC---CCC-cCCCCCCHHHHHHHH
Confidence 2221111222332 222321100 0000112344444 567999987421 111 156678999999999
Q ss_pred HHHHHHHHH
Q 038416 374 ERIKAFCQR 382 (387)
Q Consensus 374 ~~l~~~~~~ 382 (387)
+++.+++++
T Consensus 465 ~al~~~l~~ 473 (474)
T PLN02482 465 AAAERVLAR 473 (474)
T ss_pred HHHHHHHHh
Confidence 999998875
No 324
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=4e-16 Score=145.74 Aligned_cols=346 Identities=14% Similarity=0.037 Sum_probs=196.8
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.+++..-|.-.. .++ .+|.+.+++++++.......+. .+.+.++++.+.+..+ ...+.+++++++++|++
T Consensus 54 ~yiD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~e 124 (433)
T PRK00615 54 TFIDFCGSWGSL--IHGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGTEATM 124 (433)
T ss_pred EEEEcccchhcc--ccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHH
Confidence 455554443211 233 6889999999998764321211 2334445555544322 22368999999999999
Q ss_pred HHHHhhcC-CC-CeEEEcCCCCcchHHH-h-hccCCCce---e-eeeccCC-CCC-c---cCChhhHHHhhcc--CceEE
Q 038416 88 ISLSVLAR-PG-ANILIPRPGYPLYEIH-A-AGSNNNLE---A-RHYDLLP-EKR-W---EVDLDGVEALADE--NTVAI 152 (387)
Q Consensus 88 ~~~~~l~~-~g-~~vl~~~p~~~~~~~~-~-~~~~~g~~---~-~~~~~~~-~~~-~---~~~~~~l~~~~~~--~~~~v 152 (387)
.+++.... .| .+|+....+|+++... . ..+..+.. . ......+ ... . .-|++.+++.+.. +..+.
T Consensus 125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aa 204 (433)
T PRK00615 125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAG 204 (433)
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEE
Confidence 99997642 23 6788889999886422 1 10011100 0 0000000 000 0 0157788887742 23345
Q ss_pred EEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
++..| ....|... +++.+++|.++|++||+++|+||++.++. .|.. .....++.... + .+++|.++ .|+++|
T Consensus 205 vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~-ga~~~~gv~PD-i--~~~gK~lg-gG~p~~ 278 (433)
T PRK00615 205 VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQG-GAAAIYHVKPD-I--TVYGKILG-GGLPAA 278 (433)
T ss_pred EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHh-HHHHhcCCCCC-e--EEEccccc-CCccee
Confidence 55666 55567754 56779999999999999999999998773 3321 11111221112 2 25899964 568899
Q ss_pred EEEeeCCCCcccchhHHHHHHhhh----hccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGCL----NAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
++++++ ++.+.+.... ..+++.++...+++.+.|+...++ .+++..+.-...++.+.+.+.+. ++.
T Consensus 279 av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~-g~~ 349 (433)
T PRK00615 279 AVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQ-GFP 349 (433)
T ss_pred eeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 999976 6777764321 234556888888888877754322 22222233333333334444442 222
Q ss_pred CCCCCCceEEEEEecCcccccCC--------CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDI--------GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIK 377 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~ 377 (387)
+. ....|.++.+.+.......+ .....+..++ .++||.+.|... +. .=++...++++++++++.+.
T Consensus 350 v~-~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~---~~-~~ls~~ht~~did~~~~a~~ 423 (433)
T PRK00615 350 VS-LVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPF---EA-SFLSSAHSMENLDYAQNVLI 423 (433)
T ss_pred eE-EEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccc---cc-cceecCCCHHHHHHHHHHHH
Confidence 11 11246666666643211000 0112344444 567999987532 11 23566789999999999999
Q ss_pred HHHHHhh
Q 038416 378 AFCQRHA 384 (387)
Q Consensus 378 ~~~~~~~ 384 (387)
+++++..
T Consensus 424 ~~~~~~~ 430 (433)
T PRK00615 424 DSLEKVF 430 (433)
T ss_pred HHHHHHh
Confidence 9998764
No 325
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.77 E-value=3.3e-16 Score=147.81 Aligned_cols=329 Identities=14% Similarity=0.074 Sum_probs=197.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++..... ........+.+..+++.+.+.. +...+.+++++++++|++.+++.... +|
T Consensus 64 ~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r 139 (466)
T PRK07030 64 ANPRINQRIKDQVDQLEH--VILAGFSHEPVIELSERLVKIT--PPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRK 139 (466)
T ss_pred CCHHHHHHHHHHHHhcCC--ccccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCC
Confidence 567899999999875311 1111112244455555554432 22346899999999999999988631 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCC--CccC--------ChhhHHHhhcc--CceEEE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEK--RWEV--------DLDGVEALADE--NTVAIV 153 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--~~~~--------~~~~l~~~~~~--~~~~v~ 153 (387)
.+|+....+|++....+. +..+. .+..+|.+... .++. +++.+++.++. +..+.+
T Consensus 140 ~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAv 218 (466)
T PRK07030 140 KRFVTLTNSYHGETLAAM-SVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAV 218 (466)
T ss_pred cEEEEECCCcCcccHHHH-hccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 578999999988653333 01111 11122211100 0011 24556666642 344555
Q ss_pred EeCC--CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cce
Q 038416 154 IINP--GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRL 229 (387)
Q Consensus 154 l~~p--~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~ 229 (387)
+..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+.. ..++.... +-+++|.++ +| +++
T Consensus 219 i~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~-~~~gv~PD---iv~~gKgl~-gG~~Pi 293 (466)
T PRK07030 219 IVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFAC-EQAGIRPD---FLCLSKALT-GGYLPL 293 (466)
T ss_pred EEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHH-HhcCCCCC---EEeeehhcc-CCcccc
Confidence 6666 5666774 66778999999999999999999999998766643221 12222222 335689954 67 599
Q ss_pred EEEEeeCCCCcccchhHHHHHHh-------h-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKG-------C-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE- 300 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 300 (387)
|.+++++ ++.+.+.. . ...+++.++++++++.+.|+...++.+ .++.++.-+++.+.|++
T Consensus 294 ~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l---~~~~~~~G~~l~~~L~~l 362 (466)
T PRK07030 294 AAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNV---IENNRALARRMAEATAHL 362 (466)
T ss_pred eEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHH
Confidence 9999976 67666632 1 124567889999988888876544333 23333334444444433
Q ss_pred --CCCCCCCCCCCceEEEEEecCcccc--cCCC-c---HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHH
Q 038416 301 --IPCITCPVKPQGAMFVMVKLNVSML--EDIG-D---DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 301 --~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~ 370 (387)
.|.+.. ...-|.++.+.+..... .... + ...+... +.++|+.+.+. .+.+|+.+ .+++++++
T Consensus 363 ~~~~~v~~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~-----g~~i~~~Ppl~it~~eid 434 (466)
T PRK07030 363 ADHPHVAE--VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQH-ALERGALLRPL-----GSVVYFLPPYVITPEQID 434 (466)
T ss_pred hcCCCEEE--eEeceeEEEEEeccCccccccCcchhHHHHHHHHH-HHHCCeEEEec-----CCEEEEECCccCCHHHHH
Confidence 443331 23446676666632110 0000 1 1234444 45679999773 25789886 46899999
Q ss_pred HHHHHHHHHHHHh
Q 038416 371 DGLERIKAFCQRH 383 (387)
Q Consensus 371 ~~~~~l~~~~~~~ 383 (387)
.+++++.++++++
T Consensus 435 ~~~~~l~~al~~~ 447 (466)
T PRK07030 435 FLAEVASEGIDIA 447 (466)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 326
>PRK07036 hypothetical protein; Provisional
Probab=99.77 E-value=8.6e-16 Score=145.14 Aligned_cols=331 Identities=17% Similarity=0.179 Sum_probs=195.2
Q ss_pred CcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc------C-C-
Q 038416 26 DSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA------R-P- 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~-~- 96 (387)
.+|.+.+++++++..... ..+. ....+.+..+++.+....+ ..-+.+++++++++|++.+++... + .
T Consensus 68 ~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~ 143 (466)
T PRK07036 68 GREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAP--GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPA 143 (466)
T ss_pred CCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCC
Confidence 578899999998875311 1111 0123445566666654332 224689999999999999998752 1 2
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCC--CCccCC--------hhhHHHhhc---cCceE
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPE--KRWEVD--------LDGVEALAD---ENTVA 151 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~--~~~~~~--------~~~l~~~~~---~~~~~ 151 (387)
..+|+....+|++....+. +..+. .+..++.+.. ..++.+ ++.+++.+. ++..+
T Consensus 144 r~~Ii~~~~~YHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iA 222 (466)
T PRK07036 144 KKHIITRGDAYHGSTYLTA-SLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIA 222 (466)
T ss_pred ccEEEEEcCccCCccHhhh-cccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceE
Confidence 2688988999988654433 01111 1222222110 011111 233444442 23444
Q ss_pred EEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cc
Q 038416 152 IVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WR 228 (387)
Q Consensus 152 v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r 228 (387)
.++..| +...|.. +|++.++++.++|++||+++|+||++.+|...|..+..-..++.... |.+++|.+ .+| ++
T Consensus 223 avi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD---ivt~gK~l-~gG~~P 298 (466)
T PRK07036 223 AFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD---IITFAKGL-TSGYQP 298 (466)
T ss_pred EEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC---EEEEcccc-ccCccc
Confidence 555555 6666775 56777999999999999999999999988655543222111222212 34678996 456 58
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh-------h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC-------L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+|.+++++ ++.+.+... . ..+++.++++.+++.+.|+...++. ..+..+++.+++++.|+.
T Consensus 299 i~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~---l~~~~~~~g~~l~~~L~~ 367 (466)
T PRK07036 299 LGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREG---LCEHVREVGPYFEERLAS 367 (466)
T ss_pred cEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHH
Confidence 99999976 677766421 1 1356778999888888887643322 333344444444444443
Q ss_pred ---CCCCCCCCCCCceEEEEEecCcccc-cCC-C-c---HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhH
Q 038416 301 ---IPCITCPVKPQGAMFVMVKLNVSML-EDI-G-D---DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATL 369 (387)
Q Consensus 301 ---~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~ 369 (387)
+|.+.. ...-|.++.+.+..... .+. . + ...+.. .+.++||.+.+. .+.+|+++. ++++++
T Consensus 368 l~~~~~v~~--vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~-----~~~~~l~Ppl~it~~~i 439 (466)
T PRK07036 368 LRELPLVGD--VRGDHLMACVECVADKGSKALLPEDIAIGQRIDR-HCQERGLLVRPL-----EHLCVLSPPLIITRAQI 439 (466)
T ss_pred hccCCCEEE--EEeeceEEEEEEccCccccCCCCchhHHHHHHHH-HHHHCCcEEeec-----CCEEEEeCCCcCCHHHH
Confidence 332221 22346666776643111 000 0 1 123334 456779999774 256889874 599999
Q ss_pred HHHHHHHHHHHHHhh
Q 038416 370 EDGLERIKAFCQRHA 384 (387)
Q Consensus 370 ~~~~~~l~~~~~~~~ 384 (387)
+++++++.++++++.
T Consensus 440 d~~~~~l~~al~~~~ 454 (466)
T PRK07036 440 DEIVAILRAAIEETA 454 (466)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887763
No 327
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.77 E-value=5.4e-16 Score=145.55 Aligned_cols=323 Identities=15% Similarity=0.085 Sum_probs=190.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.......+. .+.+..+++.+.+..+ ..+.+++++++++|++.+++... ....+|+..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~ 141 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKF 141 (428)
T ss_pred CCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 5688999999998864321221 2334555555544322 24689999999999999998754 223688888
Q ss_pred CCCCcchHHHhhccCCCceee--------eeccCCCCC-c---cCChhhHHHhhcc--CceEEEEeCC-CCCcccc-CCH
Q 038416 104 RPGYPLYEIHAAGSNNNLEAR--------HYDLLPEKR-W---EVDLDGVEALADE--NTVAIVIINP-GNPCGNV-FSY 167 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~-~---~~~~~~l~~~~~~--~~~~v~l~~p-~nptG~~-~~~ 167 (387)
..+|++....+. +..+.... .++.....+ . .-|++.+++.++. +..+.++..| ++..|.. .|+
T Consensus 142 ~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~ 220 (428)
T PRK12389 142 AGCYHGHSDLVL-VAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKP 220 (428)
T ss_pred CCCcCCChHHHH-HhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCH
Confidence 999988654333 01111100 000000000 0 1167888887753 2334455555 6667875 467
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+.++++.++|++||+++|+||++.+|.. +.... ......+| +.+++|.+ .+|+++|.+++++ ++
T Consensus 221 ~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~~a~~~~gv~PD-----ivt~gK~l-ggG~Pi~av~~~~--------~i 285 (428)
T PRK12389 221 GFLEAVNELAHEAGALVIYDEVITAFRF-MYGGAQDLLGVEPD-----LTALGKII-GGGLPIGAYGGRK--------DI 285 (428)
T ss_pred HHHHHHHHHHHHcCCEEEEEcccccccc-CcchhhHHhCCCCC-----eeeechhh-cCCCceeEEeEHH--------HH
Confidence 7799999999999999999999998732 21111 11122222 34788996 5679999998875 67
Q ss_pred HHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEE
Q 038416 247 VDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 247 ~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~~~~ 318 (387)
.+.+... ...+++.++++.+++.+.|+...++. ..++++++-+++++.|++ +|.+..+ ....|+ +.+
T Consensus 286 ~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~v-~r~~g~-~gi 360 (428)
T PRK12389 286 MEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKHGITITI-NRLKGA-LTV 360 (428)
T ss_pred HhhhccCCCcccccCCccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EecCcE-EEE
Confidence 7766421 12356788888888888887643322 333444444444444443 4321111 122333 233
Q ss_pred ecCccccc--------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 319 KLNVSMLE--------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 319 ~~~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.+...... +......+.. .+.++||.+.+.. .+.+.+++.+++++++++++.+.+++++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 361 YFTDEKVTNYDQAERSDGEAFGKFFK-LMLNQGINLAPSK----YEAWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EEeCCCCCChhhhcccCHHHHHHHHH-HHHHCCcEeecCC----CCCeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 33221100 0001123444 4466799998752 2335666678999999999999998865
No 328
>PRK06917 hypothetical protein; Provisional
Probab=99.77 E-value=1.6e-15 Score=142.68 Aligned_cols=352 Identities=14% Similarity=0.097 Sum_probs=205.0
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
..+++..-|.-.. .++ .+|.+.+++++++..... .+.. .-..+.+..+++.+....+ ...+.+++++++++|+
T Consensus 31 ~~ylD~~~g~~~~--~lGh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAv 104 (447)
T PRK06917 31 NKYFDGSSGAVTA--GIGHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEAN 104 (447)
T ss_pred CEEEECchhHHhc--cCCCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHH
Confidence 3456654443211 233 489999999999886322 1111 1112444555555554332 2235799999999999
Q ss_pred HHHHHhhcC-------CC-CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC--ccC--------
Q 038416 87 EISLSVLAR-------PG-ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR--WEV-------- 136 (387)
Q Consensus 87 ~~~~~~l~~-------~g-~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~~-------- 136 (387)
+.+++...+ +| .+|+....+|+++...+. +..+. .+..++.+.... +..
T Consensus 105 e~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 183 (447)
T PRK06917 105 ETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGAL-SMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLA 183 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHH
Confidence 999998621 23 679999999998654433 01111 111112111000 000
Q ss_pred ChhhHHHhhcc---CceEEEEeCC-CC-Cccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCC
Q 038416 137 DLDGVEALADE---NTVAIVIINP-GN-PCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSI 209 (387)
Q Consensus 137 ~~~~l~~~~~~---~~~~v~l~~p-~n-ptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~ 209 (387)
+++.+++.++. +..+.++..| +. ..|. .+|++.++++.++|++||+++|+||++.+|...|..+.. .....+|
T Consensus 184 ~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PD 263 (447)
T PRK06917 184 CATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPD 263 (447)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCC
Confidence 23456666642 2345566666 43 3455 467888999999999999999999999987655543321 1122232
Q ss_pred ccEEEEecCccccccccc-ceEEEEeeCCCCcccchhHHHHHHhh----h-hccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 210 VPVITLGSISKRWIVPGW-RLGWLVTSDPNGILQNSGFVDSIKGC----L-NAASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 210 ~~~~~i~s~sK~~~~~g~-r~G~i~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+.+++|.+ ..|+ ++|.+++++ ++.+.+... . ..+++.++++.+++.+.|+...++. .
T Consensus 264 -----i~~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~---l 326 (447)
T PRK06917 264 -----IMTLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHN---L 326 (447)
T ss_pred -----EEEeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCC---H
Confidence 34678995 4564 899999976 676666431 1 2356778888888888887543322 2
Q ss_pred HHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEEecCcccc--cCCCc----HHHHHHHHHHhcCeEEEcCCc-c
Q 038416 284 IGLLKETADICYERIKE----IPCITCPVKPQGAMFVMVKLNVSML--EDIGD----DLEFCLKLAKEESVIILPGRT-V 352 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g~~-~ 352 (387)
.+++.++-+++++.|++ .|.+.. ...-|.++.+.+..... ..... ...+... +.++||.+.+... .
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 327 PEKAAEKGEYLIKGLQKVQQQSTIIGD--VRGKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAGQ 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEE--EeecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEeccccc
Confidence 33344444444444443 432221 23446666666632100 00001 2234444 4667999987421 0
Q ss_pred -C-CCCeEEEEee--CChHhHHHHHHHHHHHHHHhhhc
Q 038416 353 -G-MKNWLRIAFA--AEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 353 -~-~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+ ..+.+|+++. +++++++.+++++.++++++.++
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1468999985 79999999999999999887543
No 329
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.77 E-value=6.5e-16 Score=145.89 Aligned_cols=330 Identities=14% Similarity=0.140 Sum_probs=196.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++.+-.. ........+.+..+++.+.... +..-+.+++++++++|++.+++.... +|
T Consensus 73 ~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr 148 (460)
T PRK06916 73 QVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKK 148 (460)
T ss_pred CCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 678899999999886211 1110111233445555554432 22236899999999999999987542 33
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCC--Ccc--------CChhhHHHhhcc--CceEEE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEK--RWE--------VDLDGVEALADE--NTVAIV 153 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--~~~--------~~~~~l~~~~~~--~~~~v~ 153 (387)
.+|+....+|++....+. +..+. .+..+|.+... .+. .+++.+++.++. +..+.+
T Consensus 149 ~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv 227 (460)
T PRK06916 149 QRFVTLKNAYHGDTIGAV-SVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAI 227 (460)
T ss_pred cEEEEECCcCCcccHHhH-hccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 689999999988654333 01121 11222221100 001 134556666642 344555
Q ss_pred EeCC--CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cce
Q 038416 154 IINP--GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRL 229 (387)
Q Consensus 154 l~~p--~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~ 229 (387)
+..| +...|.. +|++.++++.++|++||+++|+||++.++...|..+. ...++-... |.+++|.++ +| +++
T Consensus 228 i~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a-~~~~gv~PD---iv~~gK~l~-gG~~Pi 302 (460)
T PRK06916 228 IVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFA-CEHENVTPD---IMTAGKGLT-GGYLPI 302 (460)
T ss_pred EEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhH-HHhcCCCCC---eeeeehhhh-cCcccc
Confidence 5555 6666775 6888899999999999999999999998765554322 112222222 335789964 56 599
Q ss_pred EEEEeeCCCCcccchhHHHHHHh-------h-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKG-------C-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE- 300 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 300 (387)
|.+++++ ++.+.+.. . ...+++.++++..++.+.|+...++. ..++++++-+++.+.|++
T Consensus 303 ~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 303 AITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTN---LIEQVARKTEYVATQLEDL 371 (460)
T ss_pred ceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHh
Confidence 9999976 66665532 1 12356678888888888776543322 334444444455555544
Q ss_pred --CCCCCCCCCCCceEEEEEecCcccc-c-CCC---c-HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHH
Q 038416 301 --IPCITCPVKPQGAMFVMVKLNVSML-E-DIG---D-DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 301 --~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~---~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~ 370 (387)
.+.+.. ...-|.++-+.+..... . ... . ...+... +.++||.+.+. .+.+|+.+ .+++++++
T Consensus 372 ~~~~~v~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~-----g~~l~~~Ppl~it~~~id 443 (460)
T PRK06916 372 FALKHVGD--IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKR-SRELGMLTRPL-----GNTIVFMPPLASTIDELD 443 (460)
T ss_pred hcCCCeEE--eecCCceeeEEeecccccccCCCchhhHHHHHHHH-HHHCCeEEEec-----CCEEEEeCCcccCHHHHH
Confidence 332221 22335565555532110 0 000 1 1234444 46679999874 25788886 46899999
Q ss_pred HHHHHHHHHHHHhh
Q 038416 371 DGLERIKAFCQRHA 384 (387)
Q Consensus 371 ~~~~~l~~~~~~~~ 384 (387)
+++++|.++++++-
T Consensus 444 ~~~~~l~~~l~~~~ 457 (460)
T PRK06916 444 EMLRILYKAISDVT 457 (460)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998753
No 330
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=1.2e-15 Score=142.69 Aligned_cols=321 Identities=15% Similarity=0.071 Sum_probs=196.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP-----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
+.++.+.+++.+.+.......|.. ..-+..+++.+++++ +.++.+++++++.|+..++.++ .+||+
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gde 167 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGKE 167 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCCE
Confidence 588999999999886532112211 111357788888887 3356788888999999988665 78999
Q ss_pred EEEcCCCCcc------hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC--cc--ccCCHHH
Q 038416 100 ILIPRPGYPL------YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP--CG--NVFSYQH 169 (387)
Q Consensus 100 vl~~~p~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np--tG--~~~~~~~ 169 (387)
|+++...+.. +...+. ..|++++.++... ..++++++++++++|++|++++++|+ +| ...+
T Consensus 168 VIvs~~e~~~~ggs~~i~~~~~--~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d--- 238 (464)
T PRK04311 168 VIVSRGELVEIGGAFRIPDVMR--QAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS--- 238 (464)
T ss_pred EEEcchhhhhcCcchhhHHHHH--HCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---
Confidence 9998765441 223456 7899988886532 34789999999999999999999998 45 3334
Q ss_pred HHHHHHHHHhcCcEEeecccccccc----cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLA----FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
+++|+++|++||+++|+|..++.+. +.-.....+......+-.++++|.+|.++.+ ..|++++++ +
T Consensus 239 l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~ 308 (464)
T PRK04311 239 LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------E 308 (464)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--------H
Confidence 8999999999999999999654321 1100011111111112348899999996544 589998875 6
Q ss_pred HHHHHHhhh-hccCCcchHHHHHHHHHhhhc---c--------HHHHHHHHHHHHHHHHHHHHHhhcCC--CC--CCCCC
Q 038416 246 FVDSIKGCL-NAASHPVTFIQAAVPRIVDET---N--------EAFFAKIIGLLKETADICYERIKEIP--CI--TCPVK 309 (387)
Q Consensus 246 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---~--------~~~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~~~~ 309 (387)
+++++++.. ............++.+.+... . ...+....+++.++++.+.+.|+..+ ++ ++...
T Consensus 309 li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~ 388 (464)
T PRK04311 309 LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPS 388 (464)
T ss_pred HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEc
Confidence 777776421 111222333333444333311 1 12244555777778888888887653 11 11100
Q ss_pred ---CCceE-------EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHH
Q 038416 310 ---PQGAM-------FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKA 378 (387)
Q Consensus 310 ---~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~ 378 (387)
..+|. ...+.+.... .+..++...| ++....+..- -..+.+.+.+ +..++|++.++++|++
T Consensus 389 ~~~~gggs~p~~~~~~~~v~~~~~~----~~~~~l~~~l-r~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~ 460 (464)
T PRK04311 389 FSQVGGGSLPVDRLPSAAVTLTPKD----RSLEALAARL-RLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLE 460 (464)
T ss_pred cCccCCCCCcCCCCCeEEEEEeCCC----CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 01111 1122222111 1344555544 6644433331 1257778888 5688999999999887
Q ss_pred HHH
Q 038416 379 FCQ 381 (387)
Q Consensus 379 ~~~ 381 (387)
++.
T Consensus 461 ~~~ 463 (464)
T PRK04311 461 ALN 463 (464)
T ss_pred Hhh
Confidence 753
No 331
>PRK07480 putative aminotransferase; Validated
Probab=99.77 E-value=6.4e-16 Score=145.60 Aligned_cols=334 Identities=16% Similarity=0.121 Sum_probs=194.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++....... .......+.+..+++.+....+ ...+.+++++++++|++.+++.... +|
T Consensus 67 ~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r 143 (456)
T PRK07480 67 GRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQK 143 (456)
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 47889999999987532111 0001123445555555544332 2346899999999999999987532 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCce------------eeeeccCC--CCCccCC--------hhhHHHhhc---cCceEE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLE------------ARHYDLLP--EKRWEVD--------LDGVEALAD---ENTVAI 152 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~------------~~~~~~~~--~~~~~~~--------~~~l~~~~~---~~~~~v 152 (387)
.+|+....+|++...... +..|.. +..++.+. ...+..+ ++.+++.+. ++..+.
T Consensus 144 ~~ii~~~~~yHG~tl~a~-s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAA 222 (456)
T PRK07480 144 KVIISRKNGYHGSTVAGA-SLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAA 222 (456)
T ss_pred cEEEEECCCcCCcchhhh-hccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 578888888887543222 011111 11111110 0000011 245554442 233444
Q ss_pred EEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cce
Q 038416 153 VIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRL 229 (387)
Q Consensus 153 ~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~ 229 (387)
++..| +...|.. .|.+.++++.++|++||+++|+||++.+|...|..+.. ..++.... +.+++|.++ +| +++
T Consensus 223 vi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv~PD---iv~~gK~l~-gG~~Pi 297 (456)
T PRK07480 223 FIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGS-QHFGIKPD---LMTIAKGLT-SGYIPM 297 (456)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhh-hhcCCCCC---eeeeehhhc-cCCccc
Confidence 55555 6566775 56677999999999999999999999988655543221 12222112 346789954 56 489
Q ss_pred EEEEeeCCCCcccchhHHHHHHh----h-hhccCCcchHHHHHHHHHhhhccHHHHHHHH--HHHHHHHHHHHHHhhcCC
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKG----C-LNAASHPVTFIQAAVPRIVDETNEAFFAKII--GLLKETADICYERIKEIP 302 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 302 (387)
|.+++++ ++.+.+.. . ...+++.++++.+++.+.|+...++.+.+.. +.-...++.+.+ +++.|
T Consensus 298 ~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~-l~~~~ 368 (456)
T PRK07480 298 GAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRE-LADHP 368 (456)
T ss_pred eEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hhcCC
Confidence 9999976 67666631 1 1246778899999998888764433332222 222333333333 34443
Q ss_pred CCCCCCCCCceEEEEEecCcccc--cCCCc---HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC--ChHhHHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSML--EDIGD---DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA--EPATLEDGLER 375 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~--~~e~~~~~~~~ 375 (387)
.+..+ ..-|.++-+.+..... ..+.+ ....+...+.++||.+.+. .+.+|+++.. +++++++++++
T Consensus 369 ~i~~v--rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~~~l~~~Ppl~it~~eid~~~~~ 441 (456)
T PRK07480 369 LVGEV--RGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----GDRMIISPPLVITHAEIDELVEK 441 (456)
T ss_pred CeeeE--EeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----CCEEEEECCCCCCHHHHHHHHHH
Confidence 22212 3446666666632110 00101 1123333456679998763 3679999954 89999999999
Q ss_pred HHHHHHHhh
Q 038416 376 IKAFCQRHA 384 (387)
Q Consensus 376 l~~~~~~~~ 384 (387)
|.++++++.
T Consensus 442 l~~al~~~~ 450 (456)
T PRK07480 442 ARKALDATA 450 (456)
T ss_pred HHHHHHHHH
Confidence 999998764
No 332
>PRK07481 hypothetical protein; Provisional
Probab=99.76 E-value=3.7e-15 Score=140.48 Aligned_cols=334 Identities=14% Similarity=0.102 Sum_probs=192.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+|+++++......... .....+.+..+++.+....+ +..-+.+++++++++|++.+++.... +|
T Consensus 59 ~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r 136 (449)
T PRK07481 59 NREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPER 136 (449)
T ss_pred CCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 5678899999998763211100 01122444555555554332 11235899999999999999997541 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCC--Ccc-CChhh--------HHHhhc---cCceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEK--RWE-VDLDG--------VEALAD---ENTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--~~~-~~~~~--------l~~~~~---~~~~~ 151 (387)
.+|+....+|++....+. +..+. .+..++.+... .+. .|+++ +++.+. ++..+
T Consensus 137 ~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iA 215 (449)
T PRK07481 137 TKFISLKQGYHGTHFGGA-SVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIA 215 (449)
T ss_pred cEEEEECCCcCCcchhhh-ccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 579999999998654333 01111 11222211000 011 13333 333332 23345
Q ss_pred EEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cc
Q 038416 152 IVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WR 228 (387)
Q Consensus 152 v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r 228 (387)
.++..| +...|.. +|++.++++.++|++||+++|.||++.+|...|..+.. ..++-... |-+++|.+ .+| ++
T Consensus 216 AviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv~PD---iv~~gKgl-~gG~~P 290 (449)
T PRK07481 216 AFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGS-RGWGVKPD---IMCLAKGI-TSGYVP 290 (449)
T ss_pred EEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHh-hhcCCCCC---EEEEeecc-cCCCcC
Confidence 555566 6566775 57777999999999999999999999998665543221 12222222 33567995 456 59
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHH-HHHHHHHHHHHHHHHHHhh
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFF-AKIIGLLKETADICYERIK 299 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 299 (387)
+|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++.+ ++..+.-...++.+.+..+
T Consensus 291 i~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 362 (449)
T PRK07481 291 LGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKE 362 (449)
T ss_pred ceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999976 676666431 124567788888888888876443332 2222222233333332222
Q ss_pred cCCCCCCCCCCCceEEEEEecCcccc-cCCC----c-HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHH
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSML-EDIG----D-DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLED 371 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~----~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~ 371 (387)
++|.+.. ...-|.++.+.+..... .... . ...+... +.++|+.+.+.. +.+|+++. .+++++++
T Consensus 363 ~~~~i~~--vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~g-----~~i~l~Ppl~it~~eid~ 434 (449)
T PRK07481 363 RFELVGD--VRGKGLMLALDLVADKATREPIDPSKGYANAVADV-ARENGVLVRPSG-----TKIILSPPLVIQREDVDR 434 (449)
T ss_pred cCCCeEE--EeecceEEEEEecccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC-----CEEEEECCCCCCHHHHHH
Confidence 3432221 22346666666632110 0000 1 1233343 466799998742 45899974 58999999
Q ss_pred HHHHHHHHHHHh
Q 038416 372 GLERIKAFCQRH 383 (387)
Q Consensus 372 ~~~~l~~~~~~~ 383 (387)
+++.+.++++++
T Consensus 435 ~~~~l~~~l~~~ 446 (449)
T PRK07481 435 IVDALDAGLSAV 446 (449)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 333
>PRK06149 hypothetical protein; Provisional
Probab=99.76 E-value=2e-15 Score=154.63 Aligned_cols=344 Identities=15% Similarity=0.126 Sum_probs=198.2
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNC-YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~-y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
+.|.+..-|. ..++ .+|.+.+++++++....... +. .....++.+.+++++ +...+.++++++|++|
T Consensus 585 ~~ylD~~~~~----~~lGh~hp~v~~Ai~~q~~~l~~~~~~~-~~~~~elae~L~~~~------p~~~~~v~f~~SGsEA 653 (972)
T PRK06149 585 RSYLDMVNNV----TVLGHGHPRLAAAAARQWSLLNTNSRFH-YAAVAEFSERLAALA------PDGLDTVFLVNSGSEA 653 (972)
T ss_pred CEEEECCCCc----cccCCCCHHHHHHHHHHHHhcccccccc-CHHHHHHHHHHHHhC------CCCcCEEEEeCCchHH
Confidence 3455554332 2466 78999999999987532211 21 112234444444443 2234689999999999
Q ss_pred HHHHHHhhc--CCCCeEEEcCCCCcchHHHhh-c--cCC-Cc--------eeeeeccCCC--CCcc-CC-----hhhHHH
Q 038416 86 IEISLSVLA--RPGANILIPRPGYPLYEIHAA-G--SNN-NL--------EARHYDLLPE--KRWE-VD-----LDGVEA 143 (387)
Q Consensus 86 ~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~-~--~~~-g~--------~~~~~~~~~~--~~~~-~~-----~~~l~~ 143 (387)
++.+++... ....+|+....+|++...... . +.. +. .+..++.... ..+. .+ .+.+++
T Consensus 654 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 733 (972)
T PRK06149 654 NDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVA 733 (972)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHH
Confidence 999998542 223678888888887542221 0 000 00 0122221110 0111 01 133333
Q ss_pred hhc-----cCceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEe
Q 038416 144 LAD-----ENTVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLG 216 (387)
Q Consensus 144 ~~~-----~~~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 216 (387)
.++ .+..+.+++.| +...|. .+|++.++++.++|++||+++|+||++.+|+..|..+..+..++.... |-
T Consensus 734 ~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD---iv 810 (972)
T PRK06149 734 QLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD---II 810 (972)
T ss_pred HHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC---EE
Confidence 321 23445566666 444554 567778999999999999999999999988665543222222222222 33
Q ss_pred cCcccccccccceEEEEeeCCCCcccchhHHHHHHh--hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Q 038416 217 SISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG--CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADIC 294 (387)
Q Consensus 217 s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 294 (387)
+++|.++ +|.++|.+++++ ++.+.+.. ....+++.++.+.+++.+.|+...++.+ .+..++.-+++
T Consensus 811 t~gK~lg-~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l---~~~~~~~G~~l 878 (972)
T PRK06149 811 TMAKGMG-NGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKL---QENARRVGDHL 878 (972)
T ss_pred Eeccccc-CCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 7889964 679999999976 67776653 1123457788888888888876443333 23333333344
Q ss_pred HHHhh----cCCCCCCCCCCCceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CC
Q 038416 295 YERIK----EIPCITCPVKPQGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AE 365 (387)
Q Consensus 295 ~~~l~----~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~ 365 (387)
++.|+ +.|.+..+ ..-|.++-+.+.... .+.......+...+ .++||.+.+... ..+.+|+.+. ++
T Consensus 879 ~~~L~~l~~~~~~i~~v--rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~--~~~vl~~~Ppl~it 953 (972)
T PRK06149 879 KARLEALADRHPLIGAV--HGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGD--HLNILKIKPPLCLD 953 (972)
T ss_pred HHHHHHHHHhCCCeEEE--eecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCC--CCCEEEEECCCcCC
Confidence 44443 34433312 344666666652110 01000123444444 567999987421 1367999884 79
Q ss_pred hHhHHHHHHHHHHHHHH
Q 038416 366 PATLEDGLERIKAFCQR 382 (387)
Q Consensus 366 ~e~~~~~~~~l~~~~~~ 382 (387)
+++++.++++|.+++++
T Consensus 954 ~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 954 RESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999875
No 334
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.76 E-value=2.5e-15 Score=141.81 Aligned_cols=353 Identities=14% Similarity=0.072 Sum_probs=201.2
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEc-CChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLT-LGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~-~g~~~a~ 86 (387)
.+.|..-|.-.....+ .+|.+.+++++++.+....... ....+.+..+++.+....+.... .+.++++ +++++|+
T Consensus 64 ~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAv 140 (464)
T PRK06938 64 QFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAV 140 (464)
T ss_pred EEEEccCCccccccCC-CCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHH
Confidence 4555544432222222 5778999999998643211111 11124444555555432221111 1357665 7899999
Q ss_pred HHHHHhhc-CC-CCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCC--cc--------CChhhHH
Q 038416 87 EISLSVLA-RP-GANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKR--WE--------VDLDGVE 142 (387)
Q Consensus 87 ~~~~~~l~-~~-g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~--------~~~~~l~ 142 (387)
+.+++... .. ..+|+....+|++....+. +..+. ++..++.+.... +. .+++.++
T Consensus 141 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 141 EAALKLVKTATGRSTVLSFQGGYHGMSQGAL-SLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHHHHHHhhCCCeEEEECCccCCccHHHH-hhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 99998764 22 3688988999988654433 01110 122233221100 00 1256677
Q ss_pred Hhhcc-----CceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEE
Q 038416 143 ALADE-----NTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITL 215 (387)
Q Consensus 143 ~~~~~-----~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i 215 (387)
+.+.. ...+.++..| +...|.. +|.+.++++.++|++||+++|.||++.+|...|..+. ...++.... |
T Consensus 220 ~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~e~~gv~PD---i 295 (464)
T PRK06938 220 NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFA-FEHAGIIPD---V 295 (464)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHH-HHhcCCCCC---E
Confidence 77653 1345556666 5556775 5688899999999999999999999999875554222 112222222 3
Q ss_pred ecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHH-HHHHHHHHH
Q 038416 216 GSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKII-GLLKETADI 293 (387)
Q Consensus 216 ~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ 293 (387)
.+++|.++ +|+++|.+++++ + ++.+... ...+++.++++.+++.+.|+...++.+.++. +.-...++.
T Consensus 296 v~~gKglg-gG~PlsAv~~~~--------~-~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~ 365 (464)
T PRK06938 296 VVLSKAIG-GSLPLAVVVYRE--------W-LDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREH 365 (464)
T ss_pred EEeecccc-CCCceEEEeehh--------H-hhccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 35679964 679999999875 3 2333222 2246778899988888888765443333333 222233333
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEEecCcccc-cC-------CCc-HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--
Q 038416 294 CYERIKEIPCITCPVKPQGAMFVMVKLNVSML-ED-------IGD-DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-- 362 (387)
Q Consensus 294 ~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~-------~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-- 362 (387)
+.+..+++|.+.. ...-|.++.+.+..... +. ... ...+... +.++|+.+.++.. ..+.+|+.+
T Consensus 366 L~~l~~~~~~i~~--VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g~--~~~~l~~~Ppl 440 (464)
T PRK06938 366 LRQLQRDYPQLGD--VRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRE-CLRRGLILELGGR--HGSVVRFLPPL 440 (464)
T ss_pred HHHHHHhCCCeee--eeccceEEEEEeccCcccccccccCCccHHHHHHHHHH-HHHCCeEEeecCC--CCCEEEEECCC
Confidence 3332233543321 23446676776632110 00 001 1233444 4567999887532 147899987
Q ss_pred eCChHhHHHHHHHHHHHHHHhh
Q 038416 363 AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 363 ~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+++++++.+++++.+++++.-
T Consensus 441 ~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 441 IITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred ccCHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999998754
No 335
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.75 E-value=7.5e-16 Score=140.35 Aligned_cols=312 Identities=14% Similarity=0.034 Sum_probs=196.5
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCCeEEEcCCCCc
Q 038416 30 AEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGANILIPRPGYP 108 (387)
Q Consensus 30 v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~~vl~~~p~~~ 108 (387)
..+++++.+-. .+++++ ...++-+.+.+.+++.++.+.+.+-++++.|+|.++++++.+++ ++|++|++.. .|.
T Consensus 19 ~~~~~~~~~~~--~~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLG--RSHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhcc--cCcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 66666654432 124443 44566666666666666533333346779999999999999998 5888888754 333
Q ss_pred c-hH-HHhhccCCCce-eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 109 L-YE-IHAAGSNNNLE-ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 109 ~-~~-~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
. +. ++++ ..|.+ +..+.. +.+..+++++++. + +.|.+++....||+..|. ++++..+ ++.++|
T Consensus 94 ~r~~~eia~--~~g~~~v~~l~~--~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lli 159 (374)
T TIGR01365 94 KGWVTDVTK--QLKLPDVRVLEA--EYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTI 159 (374)
T ss_pred HHHHHHHHH--hcCCCCcEEEcC--CCCCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEE
Confidence 2 34 7778 88984 676654 3455778888873 1 226688888899999884 4444322 489999
Q ss_pred ecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh-------------
Q 038416 186 ADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG------------- 252 (387)
Q Consensus 186 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~------------- 252 (387)
+|.+.+.. +. +..+.. -.+++.|..|.+++|+ .+++++.++. -+++...
T Consensus 160 VDavSs~g---~~-~l~~d~-----iDv~~tgsQK~L~~pp-Gls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~ 221 (374)
T TIGR01365 160 CDATSAAF---AQ-DLDYHK-----LDVVTFSWQKVLGGEG-AHGMLILSPR--------AVARLESYTPAWPLPKIFRL 221 (374)
T ss_pred EEccchhc---CC-CCChhH-----CcEEEEechhccCCCC-ceEEEEECHH--------HHHHHhhcCCCCCChhhhcc
Confidence 99999852 22 222322 2377889999987543 2677777652 2222110
Q ss_pred ----------h-hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCc-eE-EEE
Q 038416 253 ----------C-LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCPVK-PQG-AM-FVM 317 (387)
Q Consensus 253 ----------~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~-g~-~~~ 317 (387)
. .++.++++.+...++..+++...+ +.++.+.++++++++.+++.+++++.+..... +.. .+ ...
T Consensus 222 ~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~ 301 (374)
T TIGR01365 222 TKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVC 301 (374)
T ss_pred ccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEE
Confidence 0 123345555566666666654334 36999999999999999999999943553421 211 21 233
Q ss_pred EecCcccccCCC-c-----HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIG-D-----DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAF 379 (387)
Q Consensus 318 ~~~~~~~~~~~~-~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~ 379 (387)
+.++.+...... + ..++...+ +++||.+.+|..-..++.|||+. ..+.++++.+++.|.=+
T Consensus 302 v~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 302 LKVVDPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred EEeCCccccccccchhhHHHHHHHHHH-HHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 344332110000 1 34455544 67799999887655568999999 46899999999988543
No 336
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.75 E-value=1.5e-15 Score=142.22 Aligned_cols=323 Identities=15% Similarity=0.105 Sum_probs=193.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++........... ..+....+++.+.+.. +..-+.+++++++++|++.+++.... +|
T Consensus 62 ~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~--~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r 137 (427)
T TIGR00508 62 NHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMT--PNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNR 137 (427)
T ss_pred CCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhC--CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCc
Confidence 678899999998875321111100 1122334444443322 22236899999999999999987541 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCCce-------------eeeeccCCCCCc-----cCChhhHHHhhcc--CceEEEEeCC
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLE-------------ARHYDLLPEKRW-----EVDLDGVEALADE--NTVAIVIINP 157 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~-----~~~~~~l~~~~~~--~~~~v~l~~p 157 (387)
.+|+....+|++....+. +..+.. ...++.+ ...+ .-+++++++.+.. +..+.+++.|
T Consensus 138 ~~il~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEP 215 (427)
T TIGR00508 138 QKFLTIRSGYHGDTFGAM-SVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELHSDEIAAVILEP 215 (427)
T ss_pred cEEEEEcCCcCCccHhhh-cccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhcCCcEEEEEEec
Confidence 679999999987543333 011210 0111111 0101 0135666666642 3445566666
Q ss_pred --CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccc-cceEEE
Q 038416 158 --GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPG-WRLGWL 232 (387)
Q Consensus 158 --~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i 232 (387)
++..|. .++.+.+++|.++|++||+++|+||++.+++..|..+.. ...+.++ ++ +++|.+ .+| .+++.+
T Consensus 216 v~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD---i~--~~gK~l-~gG~~p~~a~ 289 (427)
T TIGR00508 216 IVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD---IL--CVGKAL-TGGYMTLSAT 289 (427)
T ss_pred hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC---EE--Eechhh-hcCcccceEE
Confidence 555565 457888999999999999999999999887666644322 2223332 33 479997 466 478888
Q ss_pred EeeCCCCcccchhHHHHHHhh------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGC------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
+.++ ++.+.+... ...++..++++.+++.+.|+...++ +..++++++.+++++.|+++.....
T Consensus 290 ~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~ 358 (427)
T TIGR00508 290 VTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPV 358 (427)
T ss_pred EEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 8865 677777542 1124456788888888777743322 2345666666666666665521110
Q ss_pred C-CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 307 P-VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 307 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
+ .....|.++.+.+... .+...+...+ .++||.+.+. ...+|+++. +++++++++++.+.+++++
T Consensus 359 i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 359 VKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 1 0112255555555321 1234555555 5669999764 247999885 7899999999999998864
No 337
>PRK07483 hypothetical protein; Provisional
Probab=99.75 E-value=1.9e-15 Score=142.03 Aligned_cols=339 Identities=19% Similarity=0.172 Sum_probs=197.3
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++++++.+....... ....+.+..+++.+....+ ...+.+++++++++|++.+++.... +|
T Consensus 47 ~~p~v~~av~~ql~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r 122 (443)
T PRK07483 47 SHPRVIAAIHAQIDRLAYAHTS--FFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQR 122 (443)
T ss_pred CCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 6788999999998863211111 1113444556665554322 2336899999999999999987531 33
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCCc---cCC--------hhhHHHhhc---cCceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKRW---EVD--------LDGVEALAD---ENTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~---~~~--------~~~l~~~~~---~~~~~ 151 (387)
.+|+....+|++...... +..+- .+..++.....+. ..+ ++++++++. ++..+
T Consensus 123 ~~Ii~~~~~YHG~t~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iA 201 (443)
T PRK07483 123 RHFIARRQSYHGNTLGAL-AIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVA 201 (443)
T ss_pred cEEEEECCCcCCcCHHHh-hhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 578888999987643332 01111 1112221100000 000 245665453 23345
Q ss_pred EEEeCC-CC-Cccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccccccc-
Q 038416 152 IVIINP-GN-PCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGW- 227 (387)
Q Consensus 152 v~l~~p-~n-ptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~- 227 (387)
.++..| +. ..|. .+|++.++++.++|++||+++|+||++.+|...|..+.. ..++.... |-+++|.+ ..|+
T Consensus 202 AvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~-~~~gv~PD---iv~~gK~l-~gG~~ 276 (443)
T PRK07483 202 AFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFAC-EEDGVAPD---LVTIAKGL-GAGYQ 276 (443)
T ss_pred EEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHH-hhcCCCCC---eeeehhhh-ccCcc
Confidence 555666 43 3465 567788999999999999999999999998765543221 11222212 33578995 5675
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHhh-----hhccCCcchHHHHHHHHHhhhccHHHH-HHHHHHHHHHHHHHHHHhhcC
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKGC-----LNAASHPVTFIQAAVPRIVDETNEAFF-AKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 301 (387)
++|.+++++ ++.+.+... ...+++.++++.+++.+.|+..+++.+ ++..+.-...++.+.+.++++
T Consensus 277 Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 348 (443)
T PRK07483 277 PIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQH 348 (443)
T ss_pred ccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999976 666666431 124667889998888888876443332 222222233334443333445
Q ss_pred CCCCCCCCCCceEEEEEecCccc---cc---CCCcHHHHHHHHHHhcCeEEEcCCcc--C-CCCeEEEEe--eCChHhHH
Q 038416 302 PCITCPVKPQGAMFVMVKLNVSM---LE---DIGDDLEFCLKLAKEESVIILPGRTV--G-MKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 302 ~~~~~~~~~~~g~~~~~~~~~~~---~~---~~~~~~~~~~~ll~~~gi~v~~g~~~--~-~~~~~Ri~~--~~~~e~~~ 370 (387)
|.+.. ...-|.++-+.+.... .+ .......+... +.++|+++.+.... + .++.+|+.+ ..++++++
T Consensus 349 ~~i~~--vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid 425 (443)
T PRK07483 349 PHVGD--IRGRGLFVGVELVADRATKAPFDPALKLHARIKRE-AMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425 (443)
T ss_pred CCeee--EeecccEEEEEEeecccccCCCCchhhHHHHHHHH-HHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHH
Confidence 43321 2344666666653211 00 00001234444 45679999764211 1 146899988 46899999
Q ss_pred HHHHHHHHHHHHhhh
Q 038416 371 DGLERIKAFCQRHAK 385 (387)
Q Consensus 371 ~~~~~l~~~~~~~~~ 385 (387)
+++++|.+++++...
T Consensus 426 ~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 426 EIVERLGDAIDAALA 440 (443)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 338
>PRK06148 hypothetical protein; Provisional
Probab=99.74 E-value=4.5e-15 Score=152.12 Aligned_cols=335 Identities=14% Similarity=0.067 Sum_probs=197.5
Q ss_pred CC-CcHHHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCe
Q 038416 24 LS-DSTVAEDAVVDALRTAHYN-CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGAN 99 (387)
Q Consensus 24 ~~-~~~~v~~a~~~~~~~~~~~-~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~ 99 (387)
++ .+|.+.+++++++...+.+ .|. .+.+..+++.+....+ ..-+.++++++|++|++.+++... ....+
T Consensus 636 lGH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ 708 (1013)
T PRK06148 636 VGHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEANSLALRLARAHTGQRD 708 (1013)
T ss_pred cCCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCe
Confidence 44 6889999999998753221 121 2344555555544332 123678999999999999999864 22367
Q ss_pred EEEcCCCCcchHHHhhccCCCc------------eeeeeccC--CCCCccC-C-------hhhHHHhhc-----cCceEE
Q 038416 100 ILIPRPGYPLYEIHAAGSNNNL------------EARHYDLL--PEKRWEV-D-------LDGVEALAD-----ENTVAI 152 (387)
Q Consensus 100 vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~--~~~~~~~-~-------~~~l~~~~~-----~~~~~v 152 (387)
|+....+|++....+. +..+. .+..++.+ ....+.. + .+.+++.++ .+..+.
T Consensus 709 ii~~~~~YHG~t~~a~-s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAA 787 (1013)
T PRK06148 709 AIVLDHAYHGTTTELI-DLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAF 787 (1013)
T ss_pred EEEEcCCccCCCcchh-hcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEE
Confidence 8999999987643322 01110 11111111 0001110 1 133444442 133455
Q ss_pred EEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE
Q 038416 153 VIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 153 ~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
++..| +...|. .+|++.++++.++|+++|+++|+||++.+|+..|..+.....++-. .-|.+++|.+ .+|+++|
T Consensus 788 vI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~---PDivt~gK~l-ggG~Plg 863 (1013)
T PRK06148 788 FIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVV---PDIVTMGKPI-GNGHPMG 863 (1013)
T ss_pred EEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCC---cceeeecccc-cCCcceE
Confidence 66666 444565 4677889999999999999999999999987665422222222221 2244678996 5689999
Q ss_pred EEEeeCCCCcccchhHHHHHHhh--hhccCCcchHHHHHHHHHhhhccHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 231 WLVTSDPNGILQNSGFVDSIKGC--LNAASHPVTFIQAAVPRIVDETNEAFFA-KIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
.+++++ ++.+.+... ...+++.++++++++.+.|+...++.+. +..+.-...++.+.+..+++|.+..
T Consensus 864 av~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~- 934 (1013)
T PRK06148 864 AVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGD- 934 (1013)
T ss_pred EEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceE-
Confidence 999976 677666432 2246778899999888888764433322 2222223333333333333443221
Q ss_pred CCCCceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 308 VKPQGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
....|.++-+.+.... .+.......+... +.++||.+.+... ..+.+||.+ .+++++++.+++.|.+++++
T Consensus 935 -VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 935 -VRGMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred -EeeeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 2344666666663211 0000012234444 4667999976422 147788888 46899999999999999987
Q ss_pred h
Q 038416 383 H 383 (387)
Q Consensus 383 ~ 383 (387)
+
T Consensus 1011 ~ 1011 (1013)
T PRK06148 1011 A 1011 (1013)
T ss_pred H
Confidence 5
No 339
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=8.4e-16 Score=130.58 Aligned_cols=321 Identities=16% Similarity=0.187 Sum_probs=205.0
Q ss_pred CcHHHHHHHHHHhcCCCCC---CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc------C-
Q 038416 26 DSTVAEDAVVDALRTAHYN---CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA------R- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~---~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~- 95 (387)
.+|.+.+++++++..-+.. .|.. ...+..+-+++++ ..+.++-++.+.+|.+.++.... +
T Consensus 76 chpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ 145 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGAEAVETACKLARKWGYRKKN 145 (427)
T ss_pred CCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------CcceeeecccchhHHHHHHHHHHHHHHhhcc
Confidence 7899999999988753221 2332 3345666666665 34677777778999999988754 1
Q ss_pred -CC--CeEEEcCCCCcchHHHhhccCCCceeeee----ccCCC-CC--ccCChhhHHHhhccCceEEEEeCC-CCCcccc
Q 038416 96 -PG--ANILIPRPGYPLYEIHAAGSNNNLEARHY----DLLPE-KR--WEVDLDGVEALADENTVAIVIINP-GNPCGNV 164 (387)
Q Consensus 96 -~g--~~vl~~~p~~~~~~~~~~~~~~g~~~~~~----~~~~~-~~--~~~~~~~l~~~~~~~~~~v~l~~p-~nptG~~ 164 (387)
|. ..|+....+|++-...+. ..+-+...+ |..|. .+ .-=|.++|+.+++....+.++..| +...|++
T Consensus 146 ip~nka~il~~~~nFhGrT~~ai--s~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVv 223 (427)
T KOG1402|consen 146 IPKNKAKILSAENNFHGRTLGAI--SLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVV 223 (427)
T ss_pred CCccceeEEEecccccCceeeeE--EecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceE
Confidence 22 245555666654222222 111111000 00000 00 001789999999876666677777 8899997
Q ss_pred CCH-HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 165 FSY-QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 165 ~~~-~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
.|+ .-+++..++|++||+++|.||++.++...|+-..- .++. ...++. +.|+++..-++++.+++++
T Consensus 224 vP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~--d~env~PDivi---lgKalSGG~~Pvsavl~~~------ 292 (427)
T KOG1402|consen 224 VPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLAC--DYENVRPDIVI---LGKALSGGVYPVSAVLADD------ 292 (427)
T ss_pred eCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEe--ehhhcCCCeEE---EeccccCCeeeeEEEEecH------
Confidence 554 45999999999999999999999998877752211 1111 122444 4599766668899999876
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC----CCCCCCCCCceEEEE
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP----CITCPVKPQGAMFVM 317 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~g~~~~ 317 (387)
+++-.+....+ .+++.++++...+.++|+-..++-+ .++.+..-+.++..|.+++ .+... ...-|.++.
T Consensus 293 --~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL---~era~~lG~~l~~~L~~l~~~~p~~v~~-VRGrGl~~a 366 (427)
T KOG1402|consen 293 --DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKL---VERAAKLGEILRDQLNKLQKKFPHVVKE-VRGRGLLNA 366 (427)
T ss_pred --HHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhccccccchhhe-eeccceEEE
Confidence 66665554433 4678899999988888876444444 4444455556666666653 22212 334577777
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~ 381 (387)
+.+.....++. +++..+..+ ++.|++.-|.. ++.||+.+ .++++|+++.++.|.+++.
T Consensus 367 i~i~~~~~~~~-~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 367 IVINPSKTSGQ-DAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred EEeccccccch-hHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 76653322222 455666654 77798887753 57899999 5799999999999988764
No 340
>PLN02263 serine decarboxylase
Probab=99.74 E-value=2e-14 Score=132.92 Aligned_cols=298 Identities=14% Similarity=0.011 Sum_probs=200.9
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--CCCeEEEcCCCCcchHHHhhccCCCceeeeecc
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDL 128 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~ 128 (387)
...++++.+.+|+.+.++.+-....=++|+|||+++..++.+..+ +...+++++.+|+++...+. .+|++++.+|+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~--llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR--MYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHH--hcCCcceEecc
Confidence 467899999999999888643222357899999999999888754 23478889999999999999 99999999998
Q ss_pred CCCCCccCChhhHHHhhccCc---eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCc-----EEeecccccccccCCC-C
Q 038416 129 LPEKRWEVDLDGVEALADENT---VAIVIINPGNPCGNVFSYQHLQKIARTARNLGI-----IVIADEVYNHLAFGST-P 199 (387)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~~~~---~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~-----~li~D~~~~~~~~~~~-~ 199 (387)
+ .++.+|+++|++++..++ .+|+.+.++.++|.+ +++++|+++|+++|+ |+++|.+|+++...-. .
T Consensus 208 d--~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 208 L--VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred C--CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 5 456899999999887654 345556678899999 779999999999996 9999999998654211 1
Q ss_pred CccccccCCCccEEEEecCcccccccccceEEEEeeCCCC--cccchhHHHHHHhhhhccCCcchHH--HHHHHHHhhhc
Q 038416 200 YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG--ILQNSGFVDSIKGCLNAASHPVTFI--QAAVPRIVDET 275 (387)
Q Consensus 200 ~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~ 275 (387)
...+. +... -.=+..+.+|+ +.....+|.++.+++.. +..+++ .+... ..+...+... ...+-..|...
T Consensus 283 ~~~~d-f~~~-vDSIsvD~HK~-l~~P~~cgvll~R~~~~~~~~~~~~---Yl~~~-d~ti~gSR~g~~al~lW~~L~~~ 355 (470)
T PLN02263 283 APKVT-FKKP-IGSVSVSGHKF-VGCPMPCGVQITRMEHINVLSSNVE---YLASR-DATIMGSRNGHAPIFLWYTLNRK 355 (470)
T ss_pred ccccC-CCcC-ccEEEECCccc-cCCCcCEEEEEEehhhHhhhccChH---hhCCC-CCCcCCCCCcHHHHHHHHHHHHh
Confidence 11111 1111 11234579999 45558899999986210 000111 11111 1111122222 23333445555
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCC
Q 038416 276 NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMK 355 (387)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 355 (387)
+.+.+.+..++..++++++.+.|++. ++..+..|.....+| +-+ .. .. ..+|..+.+- +
T Consensus 356 G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f-~~p--------~~-~~-----~~~gW~L~~~-----~ 414 (470)
T PLN02263 356 GYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF-ERP--------KD-EE-----FVRRWQLACQ-----G 414 (470)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE-ecC--------ch-HH-----hhcceEEccC-----C
Confidence 67889999999999999999999988 566565666443333 222 11 11 1246666542 3
Q ss_pred CeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 356 NWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 356 ~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.++|++ ..+.+.+++.++.|++..+.+
T Consensus 415 ~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 415 NIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 5688888 357899999999998887754
No 341
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.73 E-value=5.3e-15 Score=133.29 Aligned_cols=333 Identities=14% Similarity=0.023 Sum_probs=210.5
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC-C-------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA-H-------YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~-~-------~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
.+++++|.- .+|+.|++++++.+.+. . .+++++ ...++-+.+.+.+++.++.+.+.+-++++.|
T Consensus 5 ~~nF~aGPa------~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg 76 (364)
T PRK12462 5 QLNFSGGPG------ALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQGG 76 (364)
T ss_pred cceecCCCc------CCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEecc
Confidence 456667633 68899999998777652 1 234433 4456666666666666665433434456677
Q ss_pred hHHHHHHHHHhhcCCCCeEE-EcCCCCcc--hHHHhhccCCCceeeeeccCCCC--CccCChhhHHHhhccCceEEEEeC
Q 038416 82 CSQAIEISLSVLARPGANIL-IPRPGYPL--YEIHAAGSNNNLEARHYDLLPEK--RWEVDLDGVEALADENTVAIVIIN 156 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~~vl-~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~ 156 (387)
+|.+++++...|+++|++++ +...++++ +...++ .+| ++..+...... +..++++++ .++++.+.|.+++
T Consensus 77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~--~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~ 151 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEAS--RVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVS 151 (364)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHH--hcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEcc
Confidence 99999999999999998665 55566654 345555 566 44443221111 223445554 2344678888888
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
-...||+.++ ++.+.+++++|+|.+.+.+. .+..+..+ .++..+..|.+|.+| ++.++.++
T Consensus 152 NETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~ 212 (364)
T PRK12462 152 NETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRR 212 (364)
T ss_pred CCCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECH
Confidence 8889999986 22223689999999988532 22333333 377778899999887 67777765
Q ss_pred CCCcc---cchhHHHHHHhh--hhccCCcchHHHHHHHHHhhhccHH--HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-C
Q 038416 237 PNGIL---QNSGFVDSIKGC--LNAASHPVTFIQAAVPRIVDETNEA--FFAKIIGLLKETADICYERIKEIPCITCP-V 308 (387)
Q Consensus 237 ~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 308 (387)
...-. .-|.+.+..... .....+|+.+..+++...++...++ .++.+.++.++.++.+++.+++.+++... .
T Consensus 213 ~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~ 292 (364)
T PRK12462 213 ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHA 292 (364)
T ss_pred HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 21100 012222211111 1234578888888888888876555 89999999999999999999998644422 1
Q ss_pred CCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 309 KPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 309 ~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
.+. +.+-+.+++.... -..+|+.. ++++|+.-..|... .+.+|+|+ +.+.|.++++++-+++.-++
T Consensus 293 ~~~~RS~mnv~f~~~~~~-----l~~~f~~~-a~~~gl~~lkGhr~--vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 293 HRAARSTMNVAFRFRQPR-----LDTLFKEQ-STEAGFCGLSGHRS--IGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ChhhcCcceEEEEcCCHH-----HHHHHHHH-HHHCCCccccCCcc--cCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 222 2333344444321 13445554 57889988776532 46699999 56889999888888777654
No 342
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.73 E-value=8.4e-15 Score=136.77 Aligned_cols=316 Identities=16% Similarity=0.083 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP-----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
+.++.+.+++.+.+.......|.. ..-+..+++.++++++ .+..+++++++.|+..++.+ +.+||+
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gde 162 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGKE 162 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcCE
Confidence 578999999999887421111211 1123678888888883 34566778888899988855 578999
Q ss_pred EEEcCCCCc---c---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc--cc--cCCHHH
Q 038416 100 ILIPRPGYP---L---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC--GN--VFSYQH 169 (387)
Q Consensus 100 vl~~~p~~~---~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt--G~--~~~~~~ 169 (387)
|++++..|. + +...++ ..|+++..++.+. ..++++++++++++|++|++.+++|++ |. ..+
T Consensus 163 VIvs~~e~v~~ggs~~i~~~~~--~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d--- 233 (454)
T TIGR00474 163 VIVSRGELVEIGGSFRIPDVME--QSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS--- 233 (454)
T ss_pred EEECCChhhhhcchhhHHHHHH--HcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---
Confidence 999887642 1 234556 7899998886532 247899999999999999999999985 53 444
Q ss_pred HHHHHHHHHhcCcEEeecccccccccC---CCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFG---STPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~---~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
+++|+++|+++|+++++|...+.+.-. +-...+ +......+-.+++.|.+|+++.+ ..|++++++ +
T Consensus 234 l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~ 303 (454)
T TIGR00474 234 IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------E 303 (454)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH--------H
Confidence 899999999999999999864432110 000111 11111112238899999996544 479998875 5
Q ss_pred HHHHHHhhh-hccCCcchHHHHHHHHHhhhc---c--------HHHHHHHHHHHHHHHHHHHHHhhcC--CCCCC--CCC
Q 038416 246 FVDSIKGCL-NAASHPVTFIQAAVPRIVDET---N--------EAFFAKIIGLLKETADICYERIKEI--PCITC--PVK 309 (387)
Q Consensus 246 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---~--------~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~--~~~ 309 (387)
+++++++.. ............++...+... . -..+..+.+++.++++.+.+.|+.. +++.. ...
T Consensus 304 ~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~ 383 (454)
T TIGR00474 304 LIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPG 383 (454)
T ss_pred HHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEc
Confidence 666554321 000111222222222222211 1 1234445566677777777777653 22211 100
Q ss_pred C---CceE-------EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHH
Q 038416 310 P---QGAM-------FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERI 376 (387)
Q Consensus 310 ~---~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l 376 (387)
+ .+|. ...+.+... + .+..++... +++....+..-. .++.+.+.+ +..++|++.+++.|
T Consensus 384 ~~~~ggg~~p~~~l~~~~v~~~~~---~-~~~~~l~~~-lr~~~~~ii~r~---~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 384 LSQVGGGSLPDERLPSYAVTLTPD---G-LSAEKLEAR-LRELPPPIIGRI---EDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CCcccCCCCcCCCCCeEEEEEecC---C-CCHHHHHHH-HhcCCCCEEEEE---ECCEEEEEeCcCCHHHHHHHHHHh
Confidence 0 1111 111222211 1 134455554 466564443311 256777777 56788888877765
No 343
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.72 E-value=1.4e-15 Score=127.23 Aligned_cols=319 Identities=15% Similarity=0.058 Sum_probs=199.1
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 21 VSLLSDSTVAEDAVVDALRTAHYN------CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 21 ~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
|..+..+|++.++-+++++.-... -.+...-...|++.||++. ..++.++.+++-.|+..++.+++
T Consensus 77 YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh--------~rED~ilypscfdANag~feail 148 (417)
T KOG1359|consen 77 YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH--------GREDTILYPSCFDANAGAFEAIL 148 (417)
T ss_pred cccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh--------CCCceEEeccccccchHHHHHhc
Confidence 457789999999999999852110 0011112356778888887 56888999999999999999999
Q ss_pred CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHH----hhccCceEEEEeCCCCCccccCCHHHH
Q 038416 95 RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA----LADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
.|.|.|....-.|-++.+..+ ... ... .+|+..++. +.+.+.++|+--..-+..|.+.| +
T Consensus 149 ~pedAvfSDeLNhASIIdGir--Lck-ry~----------h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP---l 212 (417)
T KOG1359|consen 149 TPEDAVFSDELNHASIIDGIR--LCK-RYR----------HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP---L 212 (417)
T ss_pred ChhhhhhccccccchhhhhhH--HHh-hhc----------cchhHHHHHHHHHhhhheEEEEEecceeccCCCccc---H
Confidence 999999999889988776666 433 111 123444443 33334444544444668899977 7
Q ss_pred HHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
++|.+++++||.++++||+|+.+.++..+...-..+.. .+-.+..++++|++| |.-.||..+++ .++.-
T Consensus 213 ~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~--------~li~l 282 (417)
T KOG1359|consen 213 EEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPK--------PLISL 282 (417)
T ss_pred HHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCCh--------hHHHH
Confidence 88888888999999999999987666444333222221 123477789999965 44459999987 57776
Q ss_pred HHhhhh--ccCCcchHHHH-HHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 250 IKGCLN--AASHPVTFIQA-AVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 250 ~~~~~~--~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+++... .+++.-|++.. ...+++.-... -.+..++++.+-+++++.++.- |+.+. ... -+.+-+.+...
T Consensus 283 lrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~a-GftIs-g~~-hPI~pv~lGda--- 354 (417)
T KOG1359|consen 283 LRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAA-GFTIS-GAS-HPICPVMLGDA--- 354 (417)
T ss_pred HHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhc-Cceec-CCC-CCccceecccH---
Confidence 665532 22333332221 12222211111 2345566666777777776654 66632 211 11222222211
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.-+.++.+++++. ||.|..-+..-. ...+|+.++ +++|+++++++++.++.+-+.
T Consensus 355 --~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 355 --RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred --HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 1245677888765 999876443222 245777774 689999999999998877553
No 344
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=5.3e-15 Score=129.74 Aligned_cols=345 Identities=15% Similarity=0.128 Sum_probs=207.4
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC-CC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA-HY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
..|++.+-++-..-++.. .|++.+++.+.+..- +. +.|... ....+.+.+.+.+.+ -.++.|++++++|+|
T Consensus 56 ~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k~~hs~~~~~t~-eav~l~~~l~~~~~~-----~~~~rvff~nsGTeA 128 (433)
T KOG1401|consen 56 KEYIDFTSSWAVTILGHA-NPEVARALAEQAKKLGHSSNGYFTL-EAVELEEVLSAVLGK-----GSAERVFFCNSGTEA 128 (433)
T ss_pred ceeeeeccceeccccCCC-CHHHHHHHHHHHhhheeccCccccH-HHHHHHHHHHhcccC-----CCccEEEEecCCcHH
Confidence 456666555544444555 888888888887752 22 222221 134555555555432 267899999999999
Q ss_pred HHHHHHhhcCC--------CCeEEEcCCCCcchHHHhhccCCCceeeeeccCC---C--CCccCChhhHHHhhccCc---
Q 038416 86 IEISLSVLARP--------GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP---E--KRWEVDLDGVEALADENT--- 149 (387)
Q Consensus 86 ~~~~~~~l~~~--------g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~---~--~~~~~~~~~l~~~~~~~~--- 149 (387)
++.++....+. ..+++....+|++-...+. +..+...+..|.++ + ...--|+.++++.++.+.
T Consensus 129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgal-s~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~I 207 (433)
T KOG1401|consen 129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGAL-SVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEI 207 (433)
T ss_pred HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHH-HhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCce
Confidence 99999886421 1249999999986332222 01222222222111 1 001126888999887665
Q ss_pred eEEEEeCCCCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCccccccccc
Q 038416 150 VAIVIINPGNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGW 227 (387)
Q Consensus 150 ~~v~l~~p~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~ 227 (387)
.+||+...+...|.. ..++++..|.+.|+++++++|.||++.+|...|..... .....+ .|.++.|.+ ..|+
T Consensus 208 aAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~P-----DI~t~aK~L-~gGl 281 (433)
T KOG1401|consen 208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTP-----DITTVAKPL-GGGL 281 (433)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCC-----cceeehhhc-cCCc
Confidence 344444447778876 57788999999999999999999999997766543221 111222 256788995 6779
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHhhh----hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKGCL----NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIP 302 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (387)
++|..++++ ++.+.+..-. ..+++.+++++.+....|.... .+++++....-...++.+.+.+.+.+
T Consensus 282 PigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 282 PIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTP 353 (433)
T ss_pred eeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999987 6666665331 2567889999999888887644 45556666666677777777777654
Q ss_pred CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe------eCChHhHHHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF------AAEPATLEDGLERI 376 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~------~~~~e~~~~~~~~l 376 (387)
..... ....++++.+.+..+. ..+.+. .+..+.++.++..-.....+|+.+ .+++|.++++++.+
T Consensus 354 ~~i~g-~~grgl~ig~~~~~p~-------~~~~d~-~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~ 424 (433)
T KOG1401|consen 354 NSICG-GVGRGLVIGFEFEGPV-------YKFADA-AREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTIL 424 (433)
T ss_pred Cceee-eeeeEEEEEEEEeech-------hhhhhh-hhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHH
Confidence 32212 2334555554443321 111111 122222222221111122344444 34589999999999
Q ss_pred HHHHHHh
Q 038416 377 KAFCQRH 383 (387)
Q Consensus 377 ~~~~~~~ 383 (387)
.+.++++
T Consensus 425 ~~~l~~~ 431 (433)
T KOG1401|consen 425 EKVLSAL 431 (433)
T ss_pred HHHHHHh
Confidence 8888764
No 345
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=2.3e-14 Score=135.25 Aligned_cols=352 Identities=15% Similarity=0.083 Sum_probs=198.0
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~ 86 (387)
.++++.-|.-... ++ .+|.+.+++++++......... ....+.+..+++.+....+..... ..+++++++++|+
T Consensus 59 ~ylD~~~g~~~~~--lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAv 134 (459)
T PRK06931 59 QYLDCLAGAGTLA--LGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAV 134 (459)
T ss_pred EEEEcccchhhcc--CCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHH
Confidence 4555544432122 23 6778999999988742211111 112355566666665533211011 2346668999999
Q ss_pred HHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCC-------------ceeeeeccCCCCC--cc----CChhhH----
Q 038416 87 EISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNN-------------LEARHYDLLPEKR--WE----VDLDGV---- 141 (387)
Q Consensus 87 ~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~--~~----~~~~~l---- 141 (387)
+.+++... ...++|+....+|++....+. ... .++..++.+.... +. -+.+.+
T Consensus 135 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~al--s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06931 135 EAAIKLAKTYTGRSNVISFSGGYHGMTHGAL--AVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212 (459)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHH--hhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence 99998753 233689999999998654443 211 1122222211000 00 112222
Q ss_pred HHhhc-----cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEE
Q 038416 142 EALAD-----ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVIT 214 (387)
Q Consensus 142 ~~~~~-----~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (387)
++.++ ....+.++..| +...|.. .|++.++++.++|++||+++|.||++.+|...|..+. ...++-...
T Consensus 213 ~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a-~~~~gv~PD--- 288 (459)
T PRK06931 213 ENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA-FEHAGIEPD--- 288 (459)
T ss_pred HHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH-hhhcCCCCC---
Confidence 33332 12345555666 5556765 5778899999999999999999999999875554222 112222212
Q ss_pred EecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHH-HHHHHHHHHHHH
Q 038416 215 LGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFF-AKIIGLLKETAD 292 (387)
Q Consensus 215 i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 292 (387)
|.+++|.+ .+|+++|.++.++ + ++.+... ...+++.++++.+++.+.|+...++.+ .+..+.-...++
T Consensus 289 ivt~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~ 358 (459)
T PRK06931 289 IIVMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKA 358 (459)
T ss_pred EEEecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34678996 4579999888754 2 3433222 224667889998888888876443322 222222233333
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEEecCcccc--------cCCCc-HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee
Q 038416 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNVSML--------EDIGD-DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA 363 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~ 363 (387)
.+.+..++.|.+.. ....|.++.+.+..... +.... ...+.. .+.++|+.+.++.. ..+.+|+.+.
T Consensus 359 ~L~~l~~~~~~i~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~~~--~~~~l~~~Pp 433 (459)
T PRK06931 359 QLAELQKRYPCIGN--VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQK-ACFENGLLLERGGR--NGNVVRLLPP 433 (459)
T ss_pred HHHHHHHhCCCeEe--EecCceEEEEEEccCcccccccccCCccHHHHHHHHH-HHHHCCcEEeecCC--CCCEEEEECC
Confidence 44333334543331 23446666666632110 00001 123333 34567999876432 2467898884
Q ss_pred --CChHhHHHHHHHHHHHHHHhhh
Q 038416 364 --AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 364 --~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.++++++++++++.++++++-+
T Consensus 434 l~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 434 LLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999999987654
No 346
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.72 E-value=1.1e-14 Score=136.99 Aligned_cols=328 Identities=15% Similarity=0.132 Sum_probs=181.3
Q ss_pred CcHHHHH--HHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------
Q 038416 26 DSTVAED--AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------- 95 (387)
Q Consensus 26 ~~~~v~~--a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------- 95 (387)
.+|.+.+ ++++++..-.........-..+....+++.+.+..+ +-.-+.+++++||++|++.+++...+
T Consensus 62 ~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~ 140 (443)
T PRK08297 62 NHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGALAVENALKVAFDWKSRKNEA 140 (443)
T ss_pred CChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccc
Confidence 5677778 888887642110000000112233334444433221 11346999999999999999998631
Q ss_pred C------CCeEEEcCCCCcchHHHhhccCCCcee-e----------eeccCCC----CCcc---------CChhhHHHhh
Q 038416 96 P------GANILIPRPGYPLYEIHAAGSNNNLEA-R----------HYDLLPE----KRWE---------VDLDGVEALA 145 (387)
Q Consensus 96 ~------g~~vl~~~p~~~~~~~~~~~~~~g~~~-~----------~~~~~~~----~~~~---------~~~~~l~~~~ 145 (387)
. ..+|+....+|++....+. +..+... . .++.... .+.. -+++++++.+
T Consensus 141 ~g~~~~~r~kii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 219 (443)
T PRK08297 141 RGIDPALGTKVLHLRGAFHGRSGYTL-SLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAF 219 (443)
T ss_pred cCCCCCCCceEEEECCCcCCcchhhh-hhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Confidence 1 2579999999998654433 0111110 0 0110000 0000 0234455555
Q ss_pred cc--CceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccc
Q 038416 146 DE--NTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKR 221 (387)
Q Consensus 146 ~~--~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~ 221 (387)
.. +..+.++..| +...|.. +|++.++++.++|++||+++|.||++.+|...|..+.. ..++....++ +++|.
T Consensus 220 ~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv~PDiv---~~gK~ 295 (443)
T PRK08297 220 ERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAY-QQLGVRPDIV---AFGKK 295 (443)
T ss_pred HhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHH-HhcCCCCCEE---Eeccc
Confidence 42 3344455566 5556664 77788999999999999999999999988666543221 1122111223 57898
Q ss_pred ccccccceEEEEeeCCCCcccchhHHHHH----H--hhhhccCCcchHHHHHHHHHhhhccHHH-HHHHHHHHHHHHHHH
Q 038416 222 WIVPGWRLGWLVTSDPNGILQNSGFVDSI----K--GCLNAASHPVTFIQAAVPRIVDETNEAF-FAKIIGLLKETADIC 294 (387)
Q Consensus 222 ~~~~g~r~G~i~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~ 294 (387)
++ +|.++..+ ++.+.+ . .....+++.++++..++.+.|+...+.. +++..+.-...++.+
T Consensus 296 l~-----~~a~l~~~--------~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 362 (443)
T PRK08297 296 TQ-----VCGIMAGR--------RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARL 362 (443)
T ss_pred cc-----ccceecch--------HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 52 23333332 221111 1 0122456678888888888777543322 233333333333344
Q ss_pred HHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHH
Q 038416 295 YERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDG 372 (387)
Q Consensus 295 ~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~ 372 (387)
.+..++.|.+. ......|.++.+.++.. .....+...+ .++||.+.|+. .+.+|+++ .+++++++.+
T Consensus 363 ~~l~~~~~~~~-~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~~ 431 (443)
T PRK08297 363 EELAAEFPAVV-SNVRGRGLMCAFDLPTT-----ADRDEVIRRL-WEEGVLVLPCG----ERSIRFRPALTVTTEEIDAA 431 (443)
T ss_pred HHHHHHCCCcc-eeeeccceEEEEEecCH-----HHHHHHHHHH-HHCCEEEecCC----CCeEEEECCccCCHHHHHHH
Confidence 33333344332 01223467777777531 0123455555 46799998753 35789976 5689999999
Q ss_pred HHHHHHHHHHh
Q 038416 373 LERIKAFCQRH 383 (387)
Q Consensus 373 ~~~l~~~~~~~ 383 (387)
+++|.++++++
T Consensus 432 l~~l~~~l~~~ 442 (443)
T PRK08297 432 IDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHhh
Confidence 99999998765
No 347
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.71 E-value=1.4e-14 Score=137.60 Aligned_cols=268 Identities=15% Similarity=0.112 Sum_probs=173.9
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC----------C-CCCCEEEcCChHHHHHHHHHhhcC-------
Q 038416 34 VVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK----------L-SPEDVYLTLGCSQAIEISLSVLAR------- 95 (387)
Q Consensus 34 ~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~----------~-~~~~i~~~~g~~~a~~~~~~~l~~------- 95 (387)
+...+.. +...+.......++++.+.+|+.+..+.. . +...-++|+|||+|+..++.+..+
T Consensus 110 l~~~lN~-n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 110 LMVALNQ-NLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHhcC-CcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 4443332 33345555677899999999998765310 0 112357789999998887766421
Q ss_pred -------------------CCCeEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhc----cCc
Q 038416 96 -------------------PGANILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALAD----ENT 149 (387)
Q Consensus 96 -------------------~g~~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~----~~~ 149 (387)
++..|+++.-.|+++...+. ..|+ +++.+|++ .++.+|+++|+++++ .++
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~--~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~ 264 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAAD--VLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNI 264 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHH--HcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCC
Confidence 12468889999999998888 8887 67888875 345899999999885 355
Q ss_pred eEEEEe--CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccc
Q 038416 150 VAIVII--NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPG 226 (387)
Q Consensus 150 ~~v~l~--~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g 226 (387)
+.+.++ ..++.||.+-| +++|+++|+++|+++++|.+|++...-..... .+..+. .-..+..|.+|+++. .
T Consensus 265 ~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle--~aDSit~d~HK~l~~-P 338 (522)
T TIGR03799 265 KPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIE--RADSVTIDAHKQLYV-P 338 (522)
T ss_pred CcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCch--hCCEEEEChhhcCCc-C
Confidence 555444 55779999966 89999999999999999999986432111111 122221 112667799997433 3
Q ss_pred cceEEEEeeCCCCcccchhHHHHHHh---hh---------hccCCcchH-HHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Q 038416 227 WRLGWLVTSDPNGILQNSGFVDSIKG---CL---------NAASHPVTF-IQAAVPRIVDETNEAFFAKIIGLLKETADI 293 (387)
Q Consensus 227 ~r~G~i~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 293 (387)
..+|.++.+++. ..+.+.. +. ..+...+.. ....+...++......+.++.++..+++++
T Consensus 339 ~g~G~llvr~~~-------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~ 411 (522)
T TIGR03799 339 MGAGMVLFKDPA-------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKY 411 (522)
T ss_pred cccEEEEEeCHH-------HHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 558999887632 2222221 00 000111111 112344445555567889999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEEec
Q 038416 294 CYERIKEIPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 294 ~~~~l~~~~~~~~~~~~~~g~~~~~~~ 320 (387)
+.+.|++.|+++++..|.-+. +.+++
T Consensus 412 l~~~L~~~~~~el~~~p~l~i-v~Fr~ 437 (522)
T TIGR03799 412 FADLIQQQPDFELVTEPELCL-LTYRY 437 (522)
T ss_pred HHHHHhhCCCeEEecCCCccE-EEEEE
Confidence 999999999999775555543 34443
No 348
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.71 E-value=1.7e-14 Score=125.67 Aligned_cols=322 Identities=18% Similarity=0.139 Sum_probs=205.5
Q ss_pred CcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCC-CeEE
Q 038416 26 DSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPG-ANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g-~~vl 101 (387)
.+|.+.+++.+++..- +...|... -..++.+.+++.+ +-+-..+++++|+++|++++++... .-| -.++
T Consensus 67 chP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsGsEANelal~mar~Yt~~~diI 139 (442)
T KOG1404|consen 67 CHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSGSEANELALKMARLYTGNLDII 139 (442)
T ss_pred CChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCCchHHHHHHHHHHHhcCCceEE
Confidence 6788888888887541 22344432 2357777777776 4455678999999999999998753 222 4677
Q ss_pred EcCCCCcchHHHhhccCCCceeeeeccCCC-------------CC-ccC---------ChhhHHHhh---ccCceEEEEe
Q 038416 102 IPRPGYPLYEIHAAGSNNNLEARHYDLLPE-------------KR-WEV---------DLDGVEALA---DENTVAIVII 155 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~-~~~---------~~~~l~~~~---~~~~~~v~l~ 155 (387)
....+|++...... +..+......+++.. .+ |+= -.+++++.+ .+.+.+.++.
T Consensus 140 a~r~~YHG~t~~t~-glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafia 218 (442)
T KOG1404|consen 140 ARRNSYHGNTLYTL-GLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIA 218 (442)
T ss_pred EeeccccCCchhhc-ccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEe
Confidence 77888876543333 123332222111100 00 000 124455544 2355666666
Q ss_pred CC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE
Q 038416 156 NP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 156 ~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
.+ +.-.|++ +|+.-+++..++|+++|.++|.||++++|...| .+..++..+-+..|-|++|.. .+|+++|.++
T Consensus 219 EtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG----~~wgfe~h~v~PDIvTmAKgi-GnG~Pl~AVv 293 (442)
T KOG1404|consen 219 ETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG----HMWGFESHGVVPDIVTMAKGI-GNGFPLGAVV 293 (442)
T ss_pred ehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc----ccccccccCCCccHHHHHhhc-cCCCcceeee
Confidence 66 5556765 677789999999999999999999999988776 344555555556677999995 6779999999
Q ss_pred eeCCCCcccchhHHHHHHhhh-h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGCL-N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCP 307 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 307 (387)
... ++.+.+.+.. . .+++.+|.+.++..+.|+-.+++.+.++...+- .++.+.|.+ .|.+-.+
T Consensus 294 tt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG---~yl~~~l~~l~d~h~iIGdV 362 (442)
T KOG1404|consen 294 TTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVG---SYLLEKLAALKDKHPIIGDV 362 (442)
T ss_pred cCH--------HHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHH---HHHHHHHHHHhhcCCceeec
Confidence 875 8888887765 2 467888999888888888766666555544433 344444443 3433312
Q ss_pred CCCCceEEEEEecCccc----ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHH
Q 038416 308 VKPQGAMFVMVKLNVSM----LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERI 376 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l 376 (387)
..-|.++-+.+-... .|.. ....++.+-+++.|+++.-|..++ +.|||++ +.+++|++.+++..
T Consensus 363 --RG~GLm~GvE~V~dk~~~~pp~~-~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 363 --RGRGLMLGVELVSDKSEPKPPAT-AEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred --ccceeEEEEEEecccCCCCCcch-HHHHHHHHHHHHhCeeeecccccc--eEEEecCCeeccHHHHHHHHHHH
Confidence 233556555542211 1111 123455566788999997776654 4899999 67999997666644
No 349
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.70 E-value=3.7e-14 Score=133.25 Aligned_cols=341 Identities=14% Similarity=0.098 Sum_probs=183.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHH--HHHHHHhcCCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAE--DAVVDALRTAHYNCYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
+.+++..-|.......+ .+|.+. +++++++.......... ...... ...+++.+.+..+ +-..+.++++++|++
T Consensus 38 ~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~~v~f~~sGsE 114 (431)
T TIGR03251 38 RRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLG-DPALPHLFFIEGGAL 114 (431)
T ss_pred CChhhcccChhhcCCCC-CChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcC-CCCcCEEEEeCCcHH
Confidence 44556544432222222 556666 88888877532111111 112223 3334433333221 113468999999999
Q ss_pred HHHHHHHhhcC--------C------CCeEEEcCCCCcchHHHhhccCCCce-ee--eecc--------C----C--CCC
Q 038416 85 AIEISLSVLAR--------P------GANILIPRPGYPLYEIHAAGSNNNLE-AR--HYDL--------L----P--EKR 133 (387)
Q Consensus 85 a~~~~~~~l~~--------~------g~~vl~~~p~~~~~~~~~~~~~~g~~-~~--~~~~--------~----~--~~~ 133 (387)
|++.+++...+ . +.+|+....+|++....+. +..|.. .. ..+. . + ...
T Consensus 115 Ave~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 193 (431)
T TIGR03251 115 AVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTL-SLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN 193 (431)
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhh-hccCCccccccCCCCCCCccCCCCcccCCccccc
Confidence 99999988631 1 3679999999987654333 011211 00 0010 0 0 000
Q ss_pred cc-------CChhhHHHhhc---cCceEEEEeCCCCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 134 WE-------VDLDGVEALAD---ENTVAIVIINPGNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 134 ~~-------~~~~~l~~~~~---~~~~~v~l~~p~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
.. -+++++++.+. .+.-++++...+...|.. .|++.+++|.++|++||+++|+||+++++...|..+..
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~ 273 (431)
T TIGR03251 194 LDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAY 273 (431)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHH
Confidence 00 12334445553 234444544446667765 67788999999999999999999999988766542211
Q ss_pred -ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH-Hh--hhhccCCcchHHHHHHHHHhhhccHH
Q 038416 203 -MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI-KG--CLNAASHPVTFIQAAVPRIVDETNEA 278 (387)
Q Consensus 203 -~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~l~~~~~~ 278 (387)
...+.++ ++ +++|.+ +. .|++...+ +. ++.+.. .. ....+++.++.+..++.+.|+...+.
T Consensus 274 ~~~gv~PD--i~---~~gK~~--~~--~g~~~~~~---i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 338 (431)
T TIGR03251 274 QQLGVQPD--IV---AFGKKT--QV--CGIMAGRR---VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEE 338 (431)
T ss_pred HhcCCCCC--EE---EecccC--cc--ceEEecch---HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1122222 23 478984 21 35554321 00 111111 10 11234667888888888887754333
Q ss_pred HH-HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCe
Q 038416 279 FF-AKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNW 357 (387)
Q Consensus 279 ~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 357 (387)
.+ ++..+...+.++.+.+..++.+++... ....|.++.+.++.. .....+...+ .++||.+.+.. .+.
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~g----~~~ 407 (431)
T TIGR03251 339 RLVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPST-----ADRDEVIRQL-YREGVLLLGCG----ERS 407 (431)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCH-----HHHHHHHHHH-HhCCeEEecCC----CCe
Confidence 32 344444444444554433445423212 223466767777531 0123455555 56799998753 366
Q ss_pred EEEEe--eCChHhHHHHHHHHHH
Q 038416 358 LRIAF--AAEPATLEDGLERIKA 378 (387)
Q Consensus 358 ~Ri~~--~~~~e~~~~~~~~l~~ 378 (387)
+|+++ .+++++++++++.|.+
T Consensus 408 lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 408 IRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEEECCccCCHHHHHHHHHHHHh
Confidence 89888 4689999999999865
No 350
>PRK15029 arginine decarboxylase; Provisional
Probab=99.69 E-value=3.7e-14 Score=138.46 Aligned_cols=229 Identities=10% Similarity=0.022 Sum_probs=145.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 131 (387)
..+.++.+|+.++ ....-++++|+|.++.+++.+++++||+|+++.+||-+....+. ..|+.+++++...
T Consensus 207 I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~--L~ga~Pvyl~P~~- 276 (755)
T PRK15029 207 FGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLI--LTGAKPVYMVPSR- 276 (755)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH--HcCCeEEEecccc-
Confidence 4556666666662 23466789999999999999999999999999999999999999 9999998885322
Q ss_pred CCc----cCC-----hhhHHHhhcc--Cce--------EEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 132 KRW----EVD-----LDGVEALADE--NTV--------AIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 132 ~~~----~~~-----~~~l~~~~~~--~~~--------~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
+.+ .++ ++.+++++.. ..+ ++++++|+. -|++++ +++|+++|++++++|++||+|+.
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGa 352 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECcccc
Confidence 222 234 8888888754 234 899999974 788866 89999999999999999999985
Q ss_pred c-ccCCCCCcccccc-----C-CCccEEEEecCcccccccccceEEEEeeCCCC-cccchhHHHHHHhhhh--ccCCcch
Q 038416 193 L-AFGSTPYVPMGVF-----G-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNG-ILQNSGFVDSIKGCLN--AASHPVT 262 (387)
Q Consensus 193 ~-~~~~~~~~~~~~~-----~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 262 (387)
+ .|.. .+.....+ . ....++++.|.||. ++++.-|.++.-+... .. -.++++.... .+.+|+-
T Consensus 353 h~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~i----d~~r~~~~l~~~qSTSPSY 425 (755)
T PRK15029 353 YARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAI----NFSRFNQAYMMHATTSPLY 425 (755)
T ss_pred ccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCcccc----CHHHHHHHHHHHcCCCcHH
Confidence 3 3432 22211222 1 11235899999998 5666555554432111 11 1234544433 2344444
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038416 263 FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
+..+.+..+........-.+..++..+.+..+++.+.++
T Consensus 426 ~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 444433333322111122333444444555555555544
No 351
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.68 E-value=1.5e-15 Score=138.35 Aligned_cols=234 Identities=16% Similarity=0.183 Sum_probs=143.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 131 (387)
..+.++.+|+.++ .....++++|+|.++.+++.+++++||+|+++..+|-+....+. ..|+.+++++.. .
T Consensus 68 I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~ali--l~ga~Pvyi~p~-~ 137 (417)
T PF01276_consen 68 IKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALI--LSGAIPVYIPPE-D 137 (417)
T ss_dssp HHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHH--HHTEEEEEEEEE-E
T ss_pred HHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH--HcCCeEEEecCC-c
Confidence 4566777777773 23456788999999999999999999999999999999998888 999999888654 2
Q ss_pred CCc----cCCh-----hhHHHhhcc--CceE---EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccccc-ccC
Q 038416 132 KRW----EVDL-----DGVEALADE--NTVA---IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHL-AFG 196 (387)
Q Consensus 132 ~~~----~~~~-----~~l~~~~~~--~~~~---v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~-~~~ 196 (387)
+.+ .+++ +.++++++. ..+. +++++|+. -|++++ +++|+++|++++++|++||+|+.. .|.
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCC
Confidence 222 3466 888888864 3344 89999974 788866 899999999999999999999953 343
Q ss_pred CCCCccccccC----CCccEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHH
Q 038416 197 STPYVPMGVFG----SIVPVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVP 269 (387)
Q Consensus 197 ~~~~~~~~~~~----~~~~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 269 (387)
..+.+...+. .+..++++.|++|. ++++. .+++...+... . -.+++.+... .+.+|+-+..+.+.
T Consensus 214 -~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~-v----~~~~~~~~l~~~~TTSPSY~lmASlD 285 (417)
T PF01276_consen 214 -PLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRI-V----DHERVNEALSMHQTTSPSYPLMASLD 285 (417)
T ss_dssp -GGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCC-T----THHHHHHHHHHHS-SS--HHHHHHHH
T ss_pred -CCccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCc-c----cHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 2222222222 13457999999999 45554 45555554210 1 2344444332 24455555444444
Q ss_pred HHhhhccHHHHHHHHHHHHHHHHHHHHHh---hcCCCCCCC
Q 038416 270 RIVDETNEAFFAKIIGLLKETADICYERI---KEIPCITCP 307 (387)
Q Consensus 270 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~ 307 (387)
.+........=++..++..++++.+++.+ ++++.+.++
T Consensus 286 ~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~ 326 (417)
T PF01276_consen 286 VARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVL 326 (417)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence 44332212222334444445555555555 555555544
No 352
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.67 E-value=4.5e-14 Score=132.69 Aligned_cols=335 Identities=13% Similarity=0.061 Sum_probs=179.8
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.++++.-|.-... ++ .+|.+.+|+++++.... .+... ...+-.+++.+.+..+ ..+.+++++++++|++
T Consensus 49 ~ylD~~~g~~~~~--lGh~~p~v~~Ai~~q~~~~~--~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e 118 (431)
T PRK06209 49 EYIEYGMGLRAVG--LGHAYPPVVEAVREALQDGC--NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSDATS 118 (431)
T ss_pred EEEEccccccchh--cCCCCHHHHHHHHHHHHhCc--CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHHHHH
Confidence 4555544432122 33 57889999999988643 23221 1222233444433221 2368999999999999
Q ss_pred HHHHhhc-CCC-CeEEEc-CCCCcchHHHhhc---cCCCce--eeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCC
Q 038416 88 ISLSVLA-RPG-ANILIP-RPGYPLYEIHAAG---SNNNLE--ARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINP 157 (387)
Q Consensus 88 ~~~~~l~-~~g-~~vl~~-~p~~~~~~~~~~~---~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p 157 (387)
.+++... -.| .+|+.. ..+|+++...... ...+.. ......... .-|++++++.++. +..+.+++.|
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~~aavi~Ep 195 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHPGRIACVILEP 195 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCCCCEEEEEEcc
Confidence 9999753 123 456554 3344332111000 011110 000000000 1167888887753 3445566666
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
. .|...+.+.+++|.++|++||+++|+||++.++.+.+..........++ +.+++|.++ .|+++|.+++++
T Consensus 196 v--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD-----i~t~gK~lg-gG~p~~av~~~~- 266 (431)
T PRK06209 196 A--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD-----LSCFGKALG-NGFAVSALAGKR- 266 (431)
T ss_pred c--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc-----eeeehhhhc-CCcccEEEEEHH-
Confidence 4 2447778899999999999999999999998765432111111122222 457899975 568899999975
Q ss_pred CCcccchhHHHH--HHh---h----hhccCCcchHHHHHHHHHhhhccHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 238 NGILQNSGFVDS--IKG---C----LNAASHPVTFIQAAVPRIVDETNEAF-FAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 238 ~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
++.+. +.. . ...++++++...+++.+.|+...++. +++..+.....++.+.+...+++ +...
T Consensus 267 -------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~-~~~~ 338 (431)
T PRK06209 267 -------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHG-LQDH 338 (431)
T ss_pred -------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCC-CCeE
Confidence 56654 211 1 12345567777777777776543322 33333333334444433333342 2211
Q ss_pred CCCCceEEEEEec---CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 308 VKPQGAMFVMVKL---NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 308 ~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
....|.+..+.+ .....+...-...+..++ .++|+.+.| ++|+..+++++++++++.+.+++++.+
T Consensus 339 -vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 339 -VRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQET-IRRGVLMPS---------LVVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred -EEeecceEEEEEecCCcccCCcHHHHHHHHHHH-HHCCccccc---------ccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 111122222211 110000000011344444 556987622 567767799999999999999998764
No 353
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.67 E-value=1.1e-13 Score=137.27 Aligned_cols=331 Identities=17% Similarity=0.135 Sum_probs=196.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----------
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR---------- 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~---------- 95 (387)
.+|++.+|+++++.+- .++....-..+....+|+.+.+..+ .-.-+.|+++++|++|++.+++...+
T Consensus 383 ~~p~I~~Ai~~Qa~rl--~hv~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~ 459 (817)
T PLN02974 383 LQPELARAVAYAAGRY--GHVMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE 459 (817)
T ss_pred CCHHHHHHHHHHHhhC--CccccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5899999999999762 2222211223445566666654111 00135899999999999999887521
Q ss_pred -----------CCCeEEEcCCCCcchHHHhhccCCCc---------e-----eeeeccC-------------CCC--C--
Q 038416 96 -----------PGANILIPRPGYPLYEIHAAGSNNNL---------E-----ARHYDLL-------------PEK--R-- 133 (387)
Q Consensus 96 -----------~g~~vl~~~p~~~~~~~~~~~~~~g~---------~-----~~~~~~~-------------~~~--~-- 133 (387)
...+|+....+|++....+. +..+. . ...++.+ +.. +
T Consensus 460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAm-s~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~ 538 (817)
T PLN02974 460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAM-EAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGL 538 (817)
T ss_pred ccccccccccCCCCEEEEECCCcCCCCHHHH-hhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccc
Confidence 12469999999987443333 01110 0 0001000 000 0
Q ss_pred ------cc-----CC------------hhhHHHhhc-------cCceEEEEeCC--CCCcccc-CCHHHHHHHHHHHHhc
Q 038416 134 ------WE-----VD------------LDGVEALAD-------ENTVAIVIINP--GNPCGNV-FSYQHLQKIARTARNL 180 (387)
Q Consensus 134 ------~~-----~~------------~~~l~~~~~-------~~~~~v~l~~p--~nptG~~-~~~~~~~~l~~~~~~~ 180 (387)
|. .+ .+.+++.++ ++..+.++..| +...|.. ++++.++++.++|++|
T Consensus 539 ~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~ 618 (817)
T PLN02974 539 EGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR 618 (817)
T ss_pred cccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh
Confidence 00 00 134555553 23455666777 5667876 4677799999999999
Q ss_pred CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHh------h
Q 038416 181 GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKG------C 253 (387)
Q Consensus 181 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~------~ 253 (387)
|+++|.||++.+|+..|..+.. ..++.... |-.++|.+ .+| +++|.+++++ ++.+.+.. .
T Consensus 619 gilLI~DEV~TGfGRtG~~fa~-e~~gv~PD---Ii~~gKgL-tgG~~Plaa~l~~~--------~I~~~f~~~~~~~~~ 685 (817)
T PLN02974 619 KIPVIFDEVFTGLWRLGVESAW-ELLGCKPD---IACYAKLL-TGGLVPLAATLATE--------EVFEAFRGPSKLDAL 685 (817)
T ss_pred CCEEEEeecccCCCcccchhhH-HhcCCCCC---EEeecccc-cCCCCccEEEEEcH--------HHHHhhccccccCCc
Confidence 9999999999999877754332 22222222 34677995 466 6999999976 67776642 1
Q ss_pred -hhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHH----HHhhcCCCCCCCCCCCceEEEEEecCcccc-c
Q 038416 254 -LNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICY----ERIKEIPCITCPVKPQGAMFVMVKLNVSML-E 326 (387)
Q Consensus 254 -~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~-~ 326 (387)
...+++.++++++++.+.|+..++. ......+...+..+.+. +.+.++|.+..+ ..-|.++.+.+..... .
T Consensus 686 ~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V--Rg~Gl~~~iel~~~~~~~ 763 (817)
T PLN02974 686 LHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV--VSLGTVLALELDAEGSGS 763 (817)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--EeeeeEEEEEEecCCccc
Confidence 1256788999999998888764432 22222333333333333 344445544322 3346676666643211 0
Q ss_pred CCC--cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 327 DIG--DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 327 ~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
++. ....+...+..++|+.+.|. .+.+|+.+ .+++++++++++.|.+.+
T Consensus 764 ~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 764 GYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 110 12234444432789999884 36788765 468999999999998765
No 354
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=2.7e-17 Score=144.81 Aligned_cols=191 Identities=16% Similarity=0.153 Sum_probs=134.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP 105 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p 105 (387)
++|.+.++|.++...+. .|+......+|++.+++++ ..+..++++++|.++.+++++++++++.|++..+
T Consensus 7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 78899999966665543 5888778899999999999 4467789999999999999999999999999999
Q ss_pred CCcchHHH---hhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCC-ccccCCHHHHHHHHH
Q 038416 106 GYPLYEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNP-CGNVFSYQHLQKIAR 175 (387)
Q Consensus 106 ~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~np-tG~~~~~~~~~~l~~ 175 (387)
+|....+. .. ..|.++..++-. ++..+++++|++.+.. ++++|.+.+|+|. .|+++|.+++++|.+
T Consensus 77 aHi~~~E~ga~~~--~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~ 152 (290)
T PF01212_consen 77 AHIHFDETGAIEE--LSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISE 152 (290)
T ss_dssp EHHHHSSTTHHHH--HTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHH
T ss_pred ceeeeeccchhhH--hcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHH
Confidence 88643322 23 478888887753 3257999999998854 5789999999884 599999999999999
Q ss_pred HHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 176 TARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
+|+++|++++.|.+--.-... ....++..+..... .+..|++|.+++++ |.+++-
T Consensus 153 ~a~~~gl~lhmDGARl~~a~~-~~~~~~~e~~~~~D-~v~~~~tK~~g~~~---Gavl~~ 207 (290)
T PF01212_consen 153 LAREHGLPLHMDGARLANAAA-ALGVSLAEIAAGAD-SVSFGGTKNGGAPG---GAVLAG 207 (290)
T ss_dssp HHHHHT-EEEEEETTHHHHHC-HHHHHHHHHHTTSS-EEEEETTSTT-SSS---EEEEEE
T ss_pred HHHhCceEEEEehhhHHHhhh-cccccHHHHhhhCC-EEEEEEEccccccc---ceEEEe
Confidence 999999999999885421110 00011222222222 44456999876665 555443
No 355
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.65 E-value=5.5e-14 Score=131.69 Aligned_cols=341 Identities=13% Similarity=0.060 Sum_probs=183.6
Q ss_pred ccccCCCCCCCCCCCCCC-CcHHHHHHHHHH-hcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 8 ETRHSPWPRRPLGVSLLS-DSTVAEDAVVDA-LRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~-~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
..++|..-|.... .++ .+|.+.++++++ .... +...+.. ....++.+.+++.+.... +..-+.++++++++
T Consensus 58 ~~ylD~~sg~~~~--~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~--p~~~~~v~f~~SGs 132 (464)
T TIGR00699 58 NRLLDLYSQISSI--PIGYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVA--PKGQDQVWTGMSGS 132 (464)
T ss_pred CEEEEccCCHhhh--cCCCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhC--CCCcCEEEEeCCcH
Confidence 3556654443211 123 678889999874 2221 1111221 112334444433222222 12336899999999
Q ss_pred HHHHHHHHhhcC--------------------------CC---CeEEEcCCCCcchHHHhhccCCCce-----------e
Q 038416 84 QAIEISLSVLAR--------------------------PG---ANILIPRPGYPLYEIHAAGSNNNLE-----------A 123 (387)
Q Consensus 84 ~a~~~~~~~l~~--------------------------~g---~~vl~~~p~~~~~~~~~~~~~~g~~-----------~ 123 (387)
+|++.+++.... .| .+|+....+|++....+. +..+.. .
T Consensus 133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~al-s~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSL-STTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHH-HhcCCccccccCCCCCCc
Confidence 999999998631 11 279999999987644333 011111 1
Q ss_pred eeeccCCC-CCc-----------cCChhhHHHhhcc--CceEEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeec
Q 038416 124 RHYDLLPE-KRW-----------EVDLDGVEALADE--NTVAIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 124 ~~~~~~~~-~~~-----------~~~~~~l~~~~~~--~~~~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D 187 (387)
..+|.+.. ..+ .-+++.++++++. +..+.++..| +...|... +++.++++.++|++||+++|+|
T Consensus 212 ~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~D 291 (464)
T TIGR00699 212 PQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVD 291 (464)
T ss_pred eecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 11121110 000 0134556666643 2334455555 66678765 6788999999999999999999
Q ss_pred ccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh-hhhccCCcchHHH
Q 038416 188 EVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG-CLNAASHPVTFIQ 265 (387)
Q Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (387)
|++.++...|..+.. ...+..... +.+++|.++..| +++..+ ....... ....++..++.+.
T Consensus 292 EV~tGfGrtG~~fa~e~~gv~~~PD---i~t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp~~~ 355 (464)
T TIGR00699 292 EVQTGVGATGKFWAHEHWNLDDPPD---MVTFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDPSRA 355 (464)
T ss_pred eeeeCCCCCcchhHHHhcCCCCCCC---EEEehhhhccCC----ccccch---------hccCCCCcccccCCCCCHHHH
Confidence 999988665542221 111220111 346789864444 333321 1111111 1224567788888
Q ss_pred HHHHHHhhhccHHHHHHHH-HHHHHHHHHHHHHhhcCC-CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcC
Q 038416 266 AAVPRIVDETNEAFFAKII-GLLKETADICYERIKEIP-CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEES 343 (387)
Q Consensus 266 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (387)
+++.+.|+...++.+-+.. +.-...++.+.+..+++| .+..+.....|.++-+.++.. .....+...+ .++|
T Consensus 356 aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----~~~~~i~~~~-~~~G 429 (464)
T TIGR00699 356 LILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----AKRDKLLKKA-RNNG 429 (464)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----HHHHHHHHHH-HHCC
Confidence 8888777654333222222 222233333333323354 222121114566766666421 0123455544 5669
Q ss_pred eEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 344 VIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 344 i~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
+.+.+. ..+.+|+.+ .+++++++.++++|.+++
T Consensus 430 vl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 430 VNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred cEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 998764 147899999 468999999999998763
No 356
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.65 E-value=6.2e-14 Score=128.64 Aligned_cols=282 Identities=15% Similarity=0.098 Sum_probs=177.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-----CCCEEEcCChHHHHHHHHHhhcC----
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-----PEDVYLTLGCSQAIEISLSVLAR---- 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~---- 95 (387)
+.+..+...+....-+.+...+...+...++++.+.+|+.+.+|.+.. ...=++|+|+|+++..++.+..+
T Consensus 50 ~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~ 129 (373)
T PF00282_consen 50 PSPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALP 129 (373)
T ss_dssp -CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhh
Confidence 344454444444444444545655556789999999999998887621 24568899999999888866531
Q ss_pred ----CC------CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---C--ce-EEEEeCCCC
Q 038416 96 ----PG------ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---N--TV-AIVIINPGN 159 (387)
Q Consensus 96 ----~g------~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~--~~-~v~l~~p~n 159 (387)
.| -.|++.+-+|+++...+. ..|++++.+|+++ ++.+|+++|+++++. + +. +|+.+..+.
T Consensus 130 ~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~--~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt 205 (373)
T PF00282_consen 130 RSKAKGVEEIPKPVIYVSEQAHYSIEKAAR--ILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTT 205 (373)
T ss_dssp HHHHHTTTHCSSEEEEEETTS-THHHHHHH--HTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-T
T ss_pred hhhhcccccccccccccccccccHHHHhcc--eeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCc
Confidence 12 256778889999999999 9999999999865 557999999998753 2 23 455566788
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
.+|.+ +++++|+++|+++++|+++|.+|++..+-...... ...+..- . =+..+++|+++ ....+|+++.+++.
T Consensus 206 ~~Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~a-d-Sit~d~HK~l~-~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 206 NTGAI---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERA-D-SITIDPHKWLG-VPYGCGVLLVRDKS 279 (373)
T ss_dssp TTSBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGE-S-EEEEETTTTTS--SSS-EEEEESSGG
T ss_pred ccccc---cCHHHHhhhccccceeeeecccccccccccccccccccccccc-c-ccccchhhhhc-CCccceeEEeeccc
Confidence 89999 88999999999999999999999983322222222 1122211 1 23347999964 44789999998744
Q ss_pred Cccc----chhHHHHH-------HhhhhccCCcch-HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038416 239 GILQ----NSGFVDSI-------KGCLNAASHPVT-FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITC 306 (387)
Q Consensus 239 ~~~~----~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 306 (387)
.+.. +++++... ......+...+. .....+-..++..+.+.+.+..++..++++++.+.|++.+++++
T Consensus 280 ~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el 359 (373)
T PF00282_consen 280 DLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFEL 359 (373)
T ss_dssp GHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred chHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 2110 01111100 000011112222 12222333344455688899999999999999999999988997
Q ss_pred CCCCCceEEE
Q 038416 307 PVKPQGAMFV 316 (387)
Q Consensus 307 ~~~~~~g~~~ 316 (387)
+..|.-+..+
T Consensus 360 ~~~~~~~~vc 369 (373)
T PF00282_consen 360 VNEPDLNIVC 369 (373)
T ss_dssp SSTTSSSEEE
T ss_pred EcCCCceEEE
Confidence 7656655443
No 357
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.65 E-value=5.7e-13 Score=134.37 Aligned_cols=307 Identities=16% Similarity=0.089 Sum_probs=190.8
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcC-ChHHHHHHHHHhh----cCCCC----eEEEcCCCCcchHHHhhccCCCc
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTL-GCSQAIEISLSVL----ARPGA----NILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l----~~~g~----~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
|..++...+.+|+.+..|. +++.+.. +++++..+.+.++ .++|+ +|+++...|++....+. ..|+
T Consensus 539 G~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~--~~G~ 612 (954)
T PRK05367 539 GYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAV--MAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHH--HCCC
Confidence 4556777777777776553 3566655 4555553433332 24554 59999999988888888 8999
Q ss_pred eeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
+++.++.+. +..+|+++|++++++ ++.+|++++|++-++...+ +++|+++|+++|+++++|.++......
T Consensus 613 ~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~-- 685 (954)
T PRK05367 613 KVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG-- 685 (954)
T ss_pred EEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC--
Confidence 999998853 347899999999865 3567788888875433334 899999999999999999999742211
Q ss_pred CCccccccCCCccEEEEecCccccc----ccccceEEEEeeCCCCcccchhHHHHHHhh------h---hccCCcchH--
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPNGILQNSGFVDSIKGC------L---NAASHPVTF-- 263 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~-- 263 (387)
......+..| +++.|.+|+|+ .+|..+|.+.+++. +...+-.. . ......++.
T Consensus 686 -l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~ 753 (954)
T PRK05367 686 -LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGS 753 (954)
T ss_pred -CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHH
Confidence 1112223333 88889999975 34455888887641 11111100 0 000111222
Q ss_pred --HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEEecCcccccCCCcHHHHHHHHH
Q 038416 264 --IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG--AMFVMVKLNVSMLEDIGDDLEFCLKLA 339 (387)
Q Consensus 264 --~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll 339 (387)
....+..++...+.+.+.+..+....+++++.+.|++...+.+. .|.+ ..-+.+++.....+...+..++..+|
T Consensus 754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~-~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL- 831 (954)
T PRK05367 754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYT-GANGRVAHECILDLRPLKESTGITVDDIAKRL- 831 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-CCCCCcccceEEEeecccccCCCCHHHHHHHH-
Confidence 11122233444456778888888888999999999774233311 1111 11122333211100011345676766
Q ss_pred HhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 340 KEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.++|+.... ..|...+.+||++ ..+++|++++++.++.+.++..+
T Consensus 832 ~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 832 IDYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 777998655 3344578899999 46789999999999888877654
No 358
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.64 E-value=2.6e-13 Score=121.13 Aligned_cols=315 Identities=17% Similarity=0.144 Sum_probs=207.3
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc----C-CC---CeEEEcCCCCcchHHHhhccCCC
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA----R-PG---ANILIPRPGYPLYEIHAAGSNNN 120 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~-~g---~~vl~~~p~~~~~~~~~~~~~~g 120 (387)
.++...+.+++.+++...++.+ ....=..|+|+|+++.++..... + +| ..++++...+-.+...++ ..+
T Consensus 115 fp~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~--yf~ 191 (491)
T KOG1383|consen 115 FPVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAAR--YFE 191 (491)
T ss_pred cchhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHh--hEE
Confidence 3466788888888888877755 22333567888888666655532 1 23 367888888888999999 999
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHh-cCcEEeecccccccccC-CC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN-LGIIVIADEVYNHLAFG-ST 198 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~-~~~~li~D~~~~~~~~~-~~ 198 (387)
+++..+|+++ .++.+|+....+.+++||.+++.+-|+.|+|.. +++++|.++..+ +++++++|.+-++|... +.
T Consensus 192 v~l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~ 267 (491)
T KOG1383|consen 192 VELREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGY 267 (491)
T ss_pred EEEEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccc
Confidence 9999999975 678999999999999999999999999999999 889999999888 99999999999998753 11
Q ss_pred CCccccccCCCc-cEEEE-ecCcccccccccceEEEEeeCCCCccc----chhHHHHHHhhhhccC-CcchHHHHHHHHH
Q 038416 199 PYVPMGVFGSIV-PVITL-GSISKRWIVPGWRLGWLVTSDPNGILQ----NSGFVDSIKGCLNAAS-HPVTFIQAAVPRI 271 (387)
Q Consensus 199 ~~~~~~~~~~~~-~~~~i-~s~sK~~~~~g~r~G~i~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 271 (387)
. ....++-.. .+..+ .+-+|. |+.-...||++-++...+.. +.++...+....+..+ .+.....++-+++
T Consensus 268 ~--~~~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~ 344 (491)
T KOG1383|consen 268 L--NEEEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAAL 344 (491)
T ss_pred c--CccccccCCCCceeEeecccee-eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHH
Confidence 1 111111111 12222 345566 66556689999887553221 1122221111111111 1222222222233
Q ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc
Q 038416 272 VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT 351 (387)
Q Consensus 272 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 351 (387)
+. ..++...+..+.+.++...+++.+++++++..+..|.-.... +....+ +..++-+ ++++.|-.+....
T Consensus 345 ~~-lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~---~~s~~~----~i~elsd-~l~~~GW~lnalq- 414 (491)
T KOG1383|consen 345 MS-LGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFIL---FGSNDV----NIFELSD-LLRKKGWILNALQ- 414 (491)
T ss_pred HH-hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEE---ccCCcc----chhhhhH-HHHhcCcCccccC-
Confidence 33 455667788888999999999999999888866555433222 332211 4445544 4577798775533
Q ss_pred cCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhhh
Q 038416 352 VGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 352 ~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ +..+.|++. ..++-.++++..|+++++++.+
T Consensus 415 ~--P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 415 F--PAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred C--CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 2 335666663 3455567788888888887764
No 359
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.64 E-value=6e-13 Score=132.08 Aligned_cols=313 Identities=12% Similarity=0.033 Sum_probs=193.1
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--------CCCCeEEEcCCCCcchHHHhhccCCCc
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--------RPGANILIPRPGYPLYEIHAAGSNNNL 121 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~g~~vl~~~p~~~~~~~~~~~~~~g~ 121 (387)
+|..++...+..|+.+..|.+ . .-+..++++++..+.+.+.. ...+.|+++...|+.....+. ..|+
T Consensus 526 qG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~--~~G~ 600 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAA--MAGM 600 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHH--HCCC
Confidence 356677777777777766644 2 22334555655554443332 123578899999987777788 8999
Q ss_pred eeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 122 EARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
+++.++.+ .+..+|+++|++.+++ ++++|++++|+| +|.+-+ ++++|+++|+++|.++++|.++.....
T Consensus 601 ~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al~--- 672 (939)
T TIGR00461 601 QVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQV--- 672 (939)
T ss_pred EEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhCC---
Confidence 99999875 3447999999999974 789999999999 788732 299999999999999999999964111
Q ss_pred CCccccccCCCccEEEEecCccccc----ccccceEEEEeeCCCCcccch--hHHHH---------HHhhhhccCCcchH
Q 038416 199 PYVPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPNGILQNS--GFVDS---------IKGCLNAASHPVTF 263 (387)
Q Consensus 199 ~~~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~ 263 (387)
.......+..| ++++|.+|+|+ .+|..+|.+.+++.- ...-| .+.+. ++...+ ....+..
T Consensus 673 ~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~L-~~~lPg~~v~~t~d~~greq~Iga~s~-~~~g~a~ 747 (939)
T TIGR00461 673 GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSHL-IPFLPKHDVVSMITGIGGSKSIGSVSA-APYGSAS 747 (939)
T ss_pred CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhhc-hhhcCCCcccccccCCCCccccccccc-cccCcHH
Confidence 11222334444 88899999765 355668999887411 00000 00000 000000 0111222
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-ceE---EEEEecCcccccCCCcHHHHHHHHH
Q 038416 264 IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-GAM---FVMVKLNVSMLEDIGDDLEFCLKLA 339 (387)
Q Consensus 264 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~---~~~~~~~~~~~~~~~~~~~~~~~ll 339 (387)
....+...|.....+.+.+..+....+++++.++|++. .+.. .+. .+. =+.++++........+..++..+|
T Consensus 748 ~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l-~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL- 823 (939)
T TIGR00461 748 ILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPIL-FVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRL- 823 (939)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Cccc-ccCCCCceeEEEEEeccchhhhcCCCHHHHHHHH-
Confidence 22333334444556788888888889999999999873 3423 322 222 133455421100012456777776
Q ss_pred HhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 340 KEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.++|+.... ..|...+.+-|.+ ..++++||+.++.+.++.++..+
T Consensus 824 ~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 824 QDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 566987543 3343445555555 56889999999888777766543
No 360
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.63 E-value=6.2e-13 Score=131.18 Aligned_cols=305 Identities=11% Similarity=0.049 Sum_probs=186.9
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcC-ChHHHHHHHHHhhcC-------C-CCeEEEcCCCCcchHHHhhccCC
Q 038416 49 TLGVPSARRGIADYLNRDLPYKLSPEDVYLTL-GCSQAIEISLSVLAR-------P-GANILIPRPGYPLYEIHAAGSNN 119 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l~~-------~-g~~vl~~~p~~~~~~~~~~~~~~ 119 (387)
.+|+-++-.++.+++.+..| -+.+-+-. +++++..+++.++.. + .++|+++.-.|+.....+. ..
T Consensus 538 sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~--~~ 611 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITG----FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQ--MA 611 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHC----CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHH--HC
Confidence 45666666666666665444 23344444 456566555555431 2 3678888888866556677 78
Q ss_pred CceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccC
Q 038416 120 NLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG 196 (387)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~ 196 (387)
|++++.++.+. +..+|+++|++.++ +++.+|.+++|++-++.. +++++|+++|+++|+++++|.++....
T Consensus 612 GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~~~a~-- 684 (954)
T PRK12566 612 GMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGANLNAQ-- 684 (954)
T ss_pred CCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeChhhc--
Confidence 99999999863 33799999999987 567778888888755442 669999999999999999999997311
Q ss_pred CCCCccccccCCCccEEEEecCccccc----ccccceEEEEeeCCCCcccchhHHHHHHhh------------hhccC--
Q 038416 197 STPYVPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPNGILQNSGFVDSIKGC------------LNAAS-- 258 (387)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------------~~~~~-- 258 (387)
........++.| +++++.+|+|+ .+|.-+|.+.+.+ .+...+... ...+.
T Consensus 685 -~~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~ga~S~~~ 752 (954)
T PRK12566 685 -VGLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNGAVSAAP 752 (954)
T ss_pred -cCCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCCceeecc
Confidence 122222345444 88999999885 2344456655443 111111110 11101
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE-E--EEEecCc-ccccCCCcHHHH
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM-F--VMVKLNV-SMLEDIGDDLEF 334 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-~--~~~~~~~-~~~~~~~~~~~~ 334 (387)
..+.....++..++.....+ +.+.......+++++.+.|.+..++. . .+..+. + +.+++.. +...+ .+..++
T Consensus 753 ~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g-~~~~dv 828 (954)
T PRK12566 753 WGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTG-ISEEDV 828 (954)
T ss_pred cchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccC-CCHHHH
Confidence 11111122333334433445 66666666778889999997743444 2 222122 1 2223321 11111 245667
Q ss_pred HHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 335 CLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
...|+ ++||.... ..|...+++|+++ ..++++++++++.++.+.++..
T Consensus 829 akRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 829 AKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred HHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 77776 78987654 3444578999999 4689999999999988887754
No 361
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.61 E-value=3.7e-13 Score=130.24 Aligned_cols=166 Identities=13% Similarity=0.146 Sum_probs=116.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH-hhccCCCceeeeeccCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH-AAGSNNNLEARHYDLLP 130 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~-~~~~~~g~~~~~~~~~~ 130 (387)
..+.++.+|+.++ ....-++++|+|.++.+++.+++++||.|+++.+||-+.... +. ..|+.++++....
T Consensus 176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLi--LsGa~PVYl~P~~ 246 (720)
T PRK13578 176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALI--QAGATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH--HcCCeEEEeeccc
Confidence 3455566666662 234567889999999999999999999999999999998874 77 8999998886433
Q ss_pred CCCcc----CChhh-----HHHhhccC----------ceEEEEeCCCCCccccCCHHHHHHHHHH-HHhcCcEEeecccc
Q 038416 131 EKRWE----VDLDG-----VEALADEN----------TVAIVIINPGNPCGNVFSYQHLQKIART-ARNLGIIVIADEVY 190 (387)
Q Consensus 131 ~~~~~----~~~~~-----l~~~~~~~----------~~~v~l~~p~nptG~~~~~~~~~~l~~~-~~~~~~~li~D~~~ 190 (387)
+.++ +++++ +++++..+ .+++++++|+- -|++++ +++|+++ ++.++ +|++||+|
T Consensus 247 -n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAh 320 (720)
T PRK13578 247 -NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAW 320 (720)
T ss_pred -cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcc
Confidence 2333 35444 78777554 47889999874 788877 7888887 56777 99999999
Q ss_pred cccc-cCCC--CCccc-cccCC-CccEEEEecCcccccccccceEEEEe
Q 038416 191 NHLA-FGST--PYVPM-GVFGS-IVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 191 ~~~~-~~~~--~~~~~-~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
.... |... ...++ ..... +..++++.|.||. ++++.-+.++.
T Consensus 321 gah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LH 367 (720)
T PRK13578 321 VGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIH 367 (720)
T ss_pred hhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhh
Confidence 8643 3321 01111 12222 3457999999998 56665555443
No 362
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=9.7e-14 Score=123.02 Aligned_cols=319 Identities=12% Similarity=0.103 Sum_probs=202.4
Q ss_pred CCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 23 LLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
..+..+.+.+++.+.--.. ....-+......++++.+|+|++ .++.+++..| -..+.+.+.+|+.||.-|
T Consensus 153 ~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLI 224 (519)
T KOG1357|consen 153 VGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLI 224 (519)
T ss_pred CCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCcce
Confidence 4567777777777654321 11112222334567777777773 4567777776 556777788899999999
Q ss_pred EEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-------cC-----ceEEEEeCC-CCCccccCCH
Q 038416 101 LIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-------EN-----TVAIVIINP-GNPCGNVFSY 167 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-----~~~v~l~~p-~nptG~~~~~ 167 (387)
+..+-.|.++...++ ..|+.+.....+ |...||+.++ +. .+.+++... ...-|.+
T Consensus 225 iSDelNHaSi~~GaR--LSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i--- 292 (519)
T KOG1357|consen 225 ISDELNHASLITGAR--LSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI--- 292 (519)
T ss_pred eeccccchheecccc--ccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---
Confidence 999999999999999 899888877653 3344444432 21 234444433 3455666
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
..+.++++++++|..+++.||+|+....+ |.....+...++.+-.+.+++|+|+|+..| |++.+++ +
T Consensus 293 v~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~ 361 (519)
T KOG1357|consen 293 VDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------E 361 (519)
T ss_pred cccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--------H
Confidence 44899999999999999999999964432 222333334445556788999999998888 9999877 7
Q ss_pred HHHHHHhhhh---c-cCCcchHHHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce--EE
Q 038416 246 FVDSIKGCLN---A-ASHPVTFIQAAVPRIVDE----TNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA--MF 315 (387)
Q Consensus 246 ~~~~~~~~~~---~-~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~ 315 (387)
+++.++.... . +.-+++..|..... ++. ......++..+++.+++.+++..++.. ++.+. ..... ..
T Consensus 362 lid~lrt~s~~~~yat~~sppvaqq~~ss-l~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~dSpVvp 438 (519)
T KOG1357|consen 362 LIDYLRTPSPSALYATSLSPPVAQQILTS-VKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNNDSPVVP 438 (519)
T ss_pred HHhhhccCCCceeecccCChHHHHHHHHH-HHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCCCCcce
Confidence 8888776532 1 22334444444332 222 123556788899999999999999887 54422 22222 11
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-C--CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-M--KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~--~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.+-.+. ....+-++++++ +|.+...++.. . ....|++.+ .+.|+++.+++.+.+.-+..
T Consensus 439 lll~~~~-------k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 439 LLLYGPA-------KIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred eeecCcc-------cccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchhh
Confidence 2222222 223455566554 65554433221 1 356788884 57899999999987765443
No 363
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=2.3e-12 Score=124.67 Aligned_cols=164 Identities=16% Similarity=0.092 Sum_probs=116.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 131 (387)
..+.++.+|+.++ ....-++++|+|.++.+++.+++.+||.|++..+||-+....+. ..|+.+++++...
T Consensus 197 i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLi--lsga~PVYl~P~r- 266 (714)
T PRK15400 197 HKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMM--MSDVTPIYFRPTR- 266 (714)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH--HcCCeEEEecccc-
Confidence 3455666666662 22356788999999999999999999999999999999988888 9999999886432
Q ss_pred CCcc----CC-----hhhHHHhhccC--ce---EEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc-cC
Q 038416 132 KRWE----VD-----LDGVEALADEN--TV---AIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA-FG 196 (387)
Q Consensus 132 ~~~~----~~-----~~~l~~~~~~~--~~---~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~-~~ 196 (387)
+.++ ++ .+.+++++..+ .+ .+++++|+ --|++++ +++|+++|..++ +++||+|.... |.
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~ 340 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFS 340 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccC
Confidence 2332 34 78888888543 23 68888985 5899977 677777887776 78999998643 33
Q ss_pred CCC--Ccccccc-CCCccEEEEecCcccccccccceEEEE
Q 038416 197 STP--YVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 197 ~~~--~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
..- ..++... +.++.++++.|.||. ++++.-+.++
T Consensus 341 p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~L 378 (714)
T PRK15400 341 PIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMI 378 (714)
T ss_pred cccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHH
Confidence 211 1222211 112456999999998 5666555544
No 364
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.56 E-value=5.7e-12 Score=114.36 Aligned_cols=333 Identities=16% Similarity=0.133 Sum_probs=199.6
Q ss_pred CCCCCCC-CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-C
Q 038416 19 LGVSLLS-DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-P 96 (387)
Q Consensus 19 ~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~ 96 (387)
.+++... +++.+.++|.. .+ -.|..+.....|++.+++++ ..+.++.|..+..+..+++..+++ +
T Consensus 47 rSDTgT~apS~~m~aAM~~---GD--D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 47 LTDSGTGAVTQSMQAAMMR---GD--EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred ccCCCCCCCCHHHHHHHHc---CC--cccccCchHHHHHHHHHHHh--------CCceEEECCCCchHHHHHHHhhcccc
Confidence 3454553 78888888886 22 24777778899999999999 446788998889999999999987 6
Q ss_pred CCeEEEcCC-------CCcc-hHHHhhccCCCceeeeeccC--------CCCCccCChhhHHHhhcc----CceEEEEeC
Q 038416 97 GANILIPRP-------GYPL-YEIHAAGSNNNLEARHYDLL--------PEKRWEVDLDGVEALADE----NTVAIVIIN 156 (387)
Q Consensus 97 g~~vl~~~p-------~~~~-~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~----~~~~v~l~~ 156 (387)
|+.+++..+ .|+. ....+. ..|..+..++.+ ...+..+|++.+++++++ +...+...-
T Consensus 114 g~e~g~~~~~~~v~hn~~fett~g~a~--l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tl 191 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTTQGHSQ--INGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATI 191 (467)
T ss_pred cccccccccccccceEEEEecchHHHH--HcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeE
Confidence 776664332 2222 234566 678777665321 122347899999999974 222221111
Q ss_pred C-CCCccccCCHHHHHHHHHHHHhcCcEEeecccccc--c--------ccCCCCCcccc-ccCCCccEEEEecCcccccc
Q 038416 157 P-GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH--L--------AFGSTPYVPMG-VFGSIVPVITLGSISKRWIV 224 (387)
Q Consensus 157 p-~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~--~--------~~~~~~~~~~~-~~~~~~~~~~i~s~sK~~~~ 224 (387)
. |.-.|+.+|.+.++++.++|++||+.++.|.+--. . .+.+.....+. .+.... ..+..|+||.++.
T Consensus 192 t~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~a-Dsvt~slsKglgA 270 (467)
T TIGR02617 192 TCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYA-DMLAMSAKKDAMV 270 (467)
T ss_pred EEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccC-CEEEEEcCCCCCC
Confidence 1 33579999999999999999999999999986532 1 12222222111 101111 1455689999766
Q ss_pred cccce-EEEEeeCCCCcccchhHHHHHHhhh----h--ccCCcchHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHH
Q 038416 225 PGWRL-GWLVTSDPNGILQNSGFVDSIKGCL----N--AASHPVTFIQAAVPRIVDE-TNEAFFAKIIGLLKETADICYE 296 (387)
Q Consensus 225 ~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 296 (387)
| + |++++++ ..++ ++.++.+... . +.++.+.--..+++.-|.+ ..+.++..+...++... +
T Consensus 271 p---vGg~Lag~d-~~~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~----~ 339 (467)
T TIGR02617 271 P---MGGLLCFKD-DSFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLV----N 339 (467)
T ss_pred c---ccceEEecc-hhHH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHH----H
Confidence 5 4 4555544 2000 2333333321 1 1123344444454444443 23566666666665544 5
Q ss_pred HhhcCCCCCCCCCCCceEEEEEecCc--cccc--CCCcHHHHHHHHHHhcCeEEE-cCCcc-CC-----------CCeEE
Q 038416 297 RIKEIPCITCPVKPQGAMFVMVKLNV--SMLE--DIGDDLEFCLKLAKEESVIIL-PGRTV-GM-----------KNWLR 359 (387)
Q Consensus 297 ~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~--~~~~~~~~~~~ll~~~gi~v~-~g~~~-~~-----------~~~~R 359 (387)
.|.+. |+.++ . .+|.-++++-.. +.+| .+ ....++.+|-.+.||-.. -|+.. +. -..+|
T Consensus 340 ~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~f-pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~R 415 (467)
T TIGR02617 340 GLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQF-PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLR 415 (467)
T ss_pred HHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhhC-cHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceee
Confidence 55555 67644 4 666666664322 1111 12 456778888888888744 23321 11 14699
Q ss_pred EEee---CChHhHHHHHHHHHHHHHH
Q 038416 360 IAFA---AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 360 i~~~---~~~e~~~~~~~~l~~~~~~ 382 (387)
+.+. -+.+.++...+++..+.++
T Consensus 416 laipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 416 LTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eccccccccHhHHHHHHHHHHHHHhh
Confidence 9993 3788888888888776654
No 365
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.55 E-value=1.5e-11 Score=119.12 Aligned_cols=163 Identities=17% Similarity=0.102 Sum_probs=113.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 131 (387)
..+.++.+|+.++ ....-++++|+|.++.+++.+++.+||.|++..+||-+....+. ..|+.+++++...
T Consensus 197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLi--lsga~PVYl~P~~- 266 (713)
T PRK15399 197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLM--MSDVVPIWLKPTR- 266 (713)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH--HcCCeeEEecccc-
Confidence 3455566666662 22356788999999999999999999999999999999888888 9999999886432
Q ss_pred CCcc----CCh-----hhHHHhhccC-----ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE-eecccccccc-c
Q 038416 132 KRWE----VDL-----DGVEALADEN-----TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV-IADEVYNHLA-F 195 (387)
Q Consensus 132 ~~~~----~~~-----~~l~~~~~~~-----~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l-i~D~~~~~~~-~ 195 (387)
+.++ +++ +.+++++..+ ++.+++++|+ --|++++ +++|++.| |+.+ ++||+|.... |
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F 339 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHF 339 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhc
Confidence 2232 344 8888887543 2578889985 5899987 56666666 5655 6999999643 3
Q ss_pred CCCCCcccccc----CCCccEEEEecCcccccccccceEEEEe
Q 038416 196 GSTPYVPMGVF----GSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 196 ~~~~~~~~~~~----~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
.. .+.+...+ ..+.-++++.|.||. ++++.-+.++.
T Consensus 340 ~p-~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iH 379 (713)
T PRK15399 340 HP-IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIH 379 (713)
T ss_pred Cc-ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeee
Confidence 22 12212222 223345678999998 56665555543
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=7.9e-13 Score=115.28 Aligned_cols=330 Identities=15% Similarity=0.125 Sum_probs=202.9
Q ss_pred CCCCCCCcHHHHHHHHHHhcCC------CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 20 GVSLLSDSTVAEDAVVDALRTA------HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.+.++...+.+.+.....++.- -..-|+.......+++.||++++ .++-++-+-+-+++..++.++
T Consensus 103 NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivYs~gF~ti~S~ipaf 174 (467)
T KOG1358|consen 103 NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVYSYGFSTIESAIPAF 174 (467)
T ss_pred hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeeeccccchhhhcchhh
Confidence 3445778888888888887751 12347776677899999999993 344455555677899999999
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------------C-ceEEEEeCCCCC
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------------N-TVAIVIINPGNP 160 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~-~~~v~l~~p~np 160 (387)
+++||.|.+.+-..+.+...++ ...-.+.+...+ |.+.++..+.+ . .+.+++..-.-+
T Consensus 175 sKrGDIi~~de~~nfaIq~Glq--lSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N 245 (467)
T KOG1358|consen 175 SKRGDIIFVDEAVNFAIQKGLQ--LSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN 245 (467)
T ss_pred hccCcEEEEehhhhHHHHHHHh--hhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence 9999999998888877776666 555555555432 45555554422 1 223444444557
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
+|.+.| +.+|+++.++|...+|.|+.++....+ |++.......+..+-.++++|+.-++...| |++.++.
T Consensus 246 ~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~-- 317 (467)
T KOG1358|consen 246 TGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKS-- 317 (467)
T ss_pred CCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecce--
Confidence 999977 788888888999999999999954433 333333333333344588888888865554 6766643
Q ss_pred CcccchhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 239 GILQNSGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
.. -..+++... +.++...++....++..++.. +++-.++.+.++.....+...|+...++.+...+. .....
T Consensus 318 ~i----~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~-SPi~h 390 (467)
T KOG1358|consen 318 FI----ADHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPE-SPIIH 390 (467)
T ss_pred ee----EeeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceEEecCcC-Cceee
Confidence 00 011112111 113333344444444444432 33345566677776667777777765666443333 44556
Q ss_pred EecCcccccCCCcH----HHHHHHHHHhcCeEEEcCCc------cCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 318 VKLNVSMLEDIGDD----LEFCLKLAKEESVIILPGRT------VGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 318 ~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~g~~------~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.+....... .+. .++++..+.+ ++.+..... +..+..+||++ +.++|+++++.+.|++....+
T Consensus 391 l~l~~~~~s~-e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 391 LQLERSYGSR-EKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred eeecccccch-HHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 6665432211 111 2344444444 766654322 22356899999 458999999999998876543
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.52 E-value=1.3e-11 Score=124.13 Aligned_cols=308 Identities=15% Similarity=0.107 Sum_probs=187.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCC-----C----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTL-----G----VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~-----~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
.-.|+.+.+++.+..+. +..|++.+ | ..+++..+++++ +.+.+++.++.++|.+.++++.++.
T Consensus 115 ~~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~ 186 (993)
T PLN02414 115 THVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNN 186 (993)
T ss_pred ccCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHh
Confidence 34677777777765542 22344422 2 456677788887 6788999999999999999887763
Q ss_pred -CCC--CeEEEcCCCCcchHHHhh--ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 -RPG--ANILIPRPGYPLYEIHAA--GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 -~~g--~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++| ++|++++..|+.+...++ -...|+++..++.... + ........+++..|+ .+|.+.+
T Consensus 187 ~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v~d--- 251 (993)
T PLN02414 187 ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEVLD--- 251 (993)
T ss_pred cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEEcC---
Confidence 433 789999999998755443 0046888888875321 1 111133344444554 4999965
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc---cccccceEEEEeeCCCCcccch-h
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW---IVPGWRLGWLVTSDPNGILQNS-G 245 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~---~~~g~r~G~i~~~~~~~~~~~~-~ 245 (387)
+++|+++|+++|+++++ .++.. ... ...+...+..| +++++.+|+. |..|...|++.+++.... .-| .
T Consensus 252 v~~I~~~ah~~GaL~iV-aad~l-al~--~l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~~~r-~~Pgr 323 (993)
T PLN02414 252 YAEFVKNAHANGVKVVM-ATDLL-ALT--MLKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQEYKR-LMPGR 323 (993)
T ss_pred HHHHHHHHHHcCCEEEE-EECHH-Hhc--CCCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHHHHh-hCCCc
Confidence 89999999999999999 44432 111 12234445554 8899999985 235566899998762110 011 0
Q ss_pred HHHH---------H------Hhh--hhccCCcchHHHHHHHHHhh-----hccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 246 FVDS---------I------KGC--LNAASHPVTFIQAAVPRIVD-----ETNEAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 246 ~~~~---------~------~~~--~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
++.+ + +.. +.-..+.+.-+..++.+.+. ......+++..+++.++..++++.|+.. |
T Consensus 324 iVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G 402 (993)
T PLN02414 324 IIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-G 402 (993)
T ss_pred ccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-C
Confidence 1100 0 000 00011233322222222222 1233567888888999999999999876 6
Q ss_pred CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHH
Q 038416 304 ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIK 377 (387)
Q Consensus 304 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~ 377 (387)
++....+..+ .+.++++ +..++...| .++||.+.... .+.+|+|++ ++++||+.+++.|.
T Consensus 403 ~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 403 FQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred CccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHc
Confidence 7754333222 2333443 345566665 56699776432 467999994 68999999999986
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.51 E-value=1.8e-11 Score=123.75 Aligned_cols=270 Identities=14% Similarity=0.114 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CC--CCeEEEcCCCCcchHHH----hhccCCCceeee
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RP--GANILIPRPGYPLYEIH----AAGSNNNLEARH 125 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~--g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~ 125 (387)
.++++.+++++ +.+..++.+..++|.+.+.++.++. ++ +++|++++..|+.+... ++ ..|++++.
T Consensus 124 ~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~--~~G~ev~~ 195 (954)
T PRK05367 124 LNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAE--PLGIEVVV 195 (954)
T ss_pred HHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHH--hCCCEEEE
Confidence 44556677776 5788899999999999998888863 34 48999999999876644 45 68999988
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++... +.+ +.++.++++.+| |.+|.+.+ +++|+++|+++|+++++|....-+.. ..+...
T Consensus 196 ~~~~~------d~~------~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~----l~~pge 255 (954)
T PRK05367 196 GDAAK------ALD------HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTL----LTPPGE 255 (954)
T ss_pred ecCcc------CCC------cccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC----CCChhh
Confidence 87632 111 224555556666 46999965 99999999999999999985532221 112344
Q ss_pred cCCCccEEEEecCccc-----ccccccceEEEEeeCCCCcccchhHHHHHHhh-------------------------hh
Q 038416 206 FGSIVPVITLGSISKR-----WIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC-------------------------LN 255 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~-----~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~-------------------------~~ 255 (387)
+..| +++++.+|+ ||.| -.|++.+++ ++.+.+.-. +.
T Consensus 256 ~GaD---i~vgs~qkfg~P~g~GGP--~aGflavr~--------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRr 322 (954)
T PRK05367 256 MGAD---IAVGSAQRFGVPMGFGGP--HAAYFAVRD--------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRR 322 (954)
T ss_pred cCCC---EEEeeCcccCCCCCCCCC--CEEEEEECH--------HHHhhCCCCeeeeecccCCCcccccccccccccccc
Confidence 5554 889999998 4444 489988875 232222100 00
Q ss_pred ccCCcchHHH---HHHHHH--hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCc
Q 038416 256 AASHPVTFIQ---AAVPRI--VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGD 330 (387)
Q Consensus 256 ~~~~~~~~~~---~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 330 (387)
-..+++.-.. .++.+. +.-.....++++.++...++.++++.|+.. |+...+.+..+ .+.++++. +
T Consensus 323 ekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~~f~-~~~~~~~~-------~ 393 (954)
T PRK05367 323 EKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDSFFD-TLTVEVGG-------D 393 (954)
T ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCCCC-eEEEeCCC-------C
Confidence 0011111111 111111 122345678888899999999999999874 77744332222 22333321 4
Q ss_pred HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 331 DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
..++...+ .++||.+..- .++.+|+|+ ..++++|+.+++.|.
T Consensus 394 ~~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 394 AAAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 55666666 5669887332 156799999 468999999999996
No 369
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.51 E-value=1e-12 Score=119.58 Aligned_cols=234 Identities=17% Similarity=0.184 Sum_probs=141.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------C-CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------R-PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~-~g 97 (387)
.+|.+.+++++++..... ........+.+.++++.+.+..+ -..+.+++++++++|++.+++... . ..
T Consensus 33 ~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r 108 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGR 108 (339)
T ss_dssp T-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTT
T ss_pred CccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhcccccccccCC
Confidence 457888999998876422 22122334556667776666553 245799999999999999999866 2 23
Q ss_pred CeEEEcCCCCcchHHHhhccCCC------------ceeeeeccCCCCC---ccCChhhHHHh---hccCceEEEEeCC-C
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNN------------LEARHYDLLPEKR---WEVDLDGVEAL---ADENTVAIVIINP-G 158 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~---~~~~~~~l~~~---~~~~~~~v~l~~p-~ 158 (387)
.+|+....+|++...... +..+ ..+..+|.+.... .......+++. ..++..+.++..| +
T Consensus 109 ~~il~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~ 187 (339)
T PF00202_consen 109 RKILAFEGSYHGRTLGAL-SLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQ 187 (339)
T ss_dssp TEEEEETTTB-TSSHHHH-HHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSB
T ss_pred ceEEEeeeeeeccCcccc-cccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccc
Confidence 789999999987443222 0111 1123333321000 00001112222 2233344555555 5
Q ss_pred CCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 159 NPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 159 nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
...|.. ++++.+++|.++|++||+++|+||++.++...|..+. ...++-...++ +++|.+ ..|+++|.+++++
T Consensus 188 g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a-~~~~gv~PDiv---~~gK~l-~gG~p~sav~~~~- 261 (339)
T PF00202_consen 188 GEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFA-SEHYGVDPDIV---TFGKGL-GGGLPISAVLGSE- 261 (339)
T ss_dssp TTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSG-HHHHTSSSSEE---EEEGGG-GTTSSEEEEEEEH-
T ss_pred cccCccccccchhhehcccccccccceecccccccccccCCccc-eecccccCccc---ccccch-hhhhhcccccccc-
Confidence 555654 5677799999999999999999999999876665432 22222222233 456996 4559999999986
Q ss_pred CCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccH
Q 038416 238 NGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNE 277 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 277 (387)
++.+.+.... ..++..++++..++.+.|+..++
T Consensus 262 -------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~ 295 (339)
T PF00202_consen 262 -------EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEE 295 (339)
T ss_dssp -------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH
T ss_pred -------hhhccccccccccccccchHhhhhhhhHHHhhcc
Confidence 5666553332 25667788888888888876444
No 370
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.45 E-value=1.9e-10 Score=110.63 Aligned_cols=276 Identities=15% Similarity=0.092 Sum_probs=169.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC--------
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP-------- 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-------- 96 (387)
+.++.+...+....-+.+...+........+++.+.+++.+.+|++. ..=.+|+|||.|+..++....+.
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~ 171 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMK 171 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhh
Confidence 45555555444444444444555556778999999999999888653 33447889998888766553210
Q ss_pred --------------------------------------------C------CeEEEcCCCCcchHHHhhccCCCce---e
Q 038416 97 --------------------------------------------G------ANILIPRPGYPLYEIHAAGSNNNLE---A 123 (387)
Q Consensus 97 --------------------------------------------g------~~vl~~~p~~~~~~~~~~~~~~g~~---~ 123 (387)
| -+++++...|+++...+. ..|+. +
T Consensus 172 ~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~--ilGlG~~~v 249 (608)
T TIGR03811 172 EVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAAD--IIGIGLDQV 249 (608)
T ss_pred hccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHH--HcCCCcccE
Confidence 0 057888888999999999 88885 7
Q ss_pred eeeccCCCCCccCChhhHHHhhcc----C--ceEEEEeCCCCCccccCCHHHHHHHHHHH---HhcCc--EEeecccccc
Q 038416 124 RHYDLLPEKRWEVDLDGVEALADE----N--TVAIVIINPGNPCGNVFSYQHLQKIARTA---RNLGI--IVIADEVYNH 192 (387)
Q Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~~----~--~~~v~l~~p~nptG~~~~~~~~~~l~~~~---~~~~~--~li~D~~~~~ 192 (387)
+.+|++ +++.+|++.|+++++. + +-+|+-+..+..+|.+=| +++|+++| +++|+ ++++|.+|++
T Consensus 250 v~VpvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~~l~~~~~~~gl~~~lHVDAAyGG 324 (608)
T TIGR03811 250 IPVPVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIVALRNKLMKEGIYFYLHVDAAYGG 324 (608)
T ss_pred EEeecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHHHHHHHHHHcCCceeEeeeccccc
Confidence 888875 4568999999998853 2 234565667888999945 55555555 77887 6999999998
Q ss_pred cc---cCCC--CCcc----------------------------ccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 193 LA---FGST--PYVP----------------------------MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 193 ~~---~~~~--~~~~----------------------------~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
+. +... .+.+ +..+..- .=+..++||+ +.....+|.++.+++.
T Consensus 325 ~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~A--DSItvDpHK~-g~~Py~~G~ll~Rd~~- 400 (608)
T TIGR03811 325 YGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEA--ESVTIDPHKM-GYIPYSAGGIVIQDIR- 400 (608)
T ss_pred hhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCc--eEEEeCcccc-cccCCCeEEEEEeCHH-
Confidence 53 1110 0000 1111111 1233479999 5666889999998742
Q ss_pred cccchhHHHHHHh---hhh------------ccCCcchHHHHHHH--HHhhhc--cHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 240 ILQNSGFVDSIKG---CLN------------AASHPVTFIQAAVP--RIVDET--NEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 240 ~~~~~~~~~~~~~---~~~------------~~~~~~~~~~~~~~--~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
+.+.+.. +.. .....+.++..++. ..++.. ..+.+.+..++..+.++++.+.|+.
T Consensus 401 ------~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 401 ------MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred ------HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222211 100 01112222222222 222222 4567888888999999999999887
Q ss_pred C------CCCCC--CCCCCceEEEEEec
Q 038416 301 I------PCITC--PVKPQGAMFVMVKL 320 (387)
Q Consensus 301 ~------~~~~~--~~~~~~g~~~~~~~ 320 (387)
+ +.+++ +..|.-. .+.+++
T Consensus 475 ~~~~~~~~~~el~~~~~pdln-iV~Fr~ 501 (608)
T TIGR03811 475 LEFKVGDKEIEVHPLTKPDFN-MVDYVF 501 (608)
T ss_pred cccccCCCCeeEEecCCCCcc-eEEEEE
Confidence 3 34553 3345433 344444
No 371
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.44 E-value=1e-10 Score=99.97 Aligned_cols=287 Identities=13% Similarity=0.074 Sum_probs=181.2
Q ss_pred CCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 70 KLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 70 ~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
+..+.+++++.+++--++.++.+.. ++|++||+++-.-++...+.. .--.++.....+ -...+.+++++++++.
T Consensus 90 GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a--~g~~~~~~~~~~--~~~~~~P~~~~~~~~d 165 (407)
T COG3844 90 GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIA--EGLADLLGIGYD--LEGVIAPRALEEAITD 165 (407)
T ss_pred cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhh--cchhhhhccccc--ceeeeChHHHHHhhcc
Confidence 4678899999999888888887765 458888888766655544433 111112111111 1124567899999998
Q ss_pred CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccc
Q 038416 148 NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPG 226 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g 226 (387)
++-+|++++.+.-||+.+. +.+|-++++++|++++-|-+|+- |.-+..+...+ -.+-|++..|.+ +.||
T Consensus 166 d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~g---aDfaigcsyKYLNgGPG 235 (407)
T COG3844 166 DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAG---ADFAIGCSYKYLNGGPG 235 (407)
T ss_pred ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhccc----CCcceeecccC---CCeeeeeeceeccCCCC
Confidence 9999999999999999976 88999999999999999999985 22222232222 338888888987 3677
Q ss_pred cceEEEEeeCCCCcccchhHHHHHHhhhh----------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHH
Q 038416 227 WRLGWLVTSDPNGILQNSGFVDSIKGCLN----------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKET 290 (387)
Q Consensus 227 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 290 (387)
...|.-+.++..+.+. |.+..++...+. .-++++..+..++...|.-...-.+.+.+++--..
T Consensus 236 apa~l~v~~~h~e~~~-~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaL 314 (407)
T COG3844 236 APAGLFVAPRHRERSW-PPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLAL 314 (407)
T ss_pred CceeEEeccccccccc-cccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHH
Confidence 7666666554332211 111111111000 01233334444555555433333455666666667
Q ss_pred HHHHHHHhhcC-C--CCCCCCCCC----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee
Q 038416 291 ADICYERIKEI-P--CITCPVKPQ----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA 363 (387)
Q Consensus 291 ~~~~~~~l~~~-~--~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~ 363 (387)
..++++.++.. + ++++. .|. -|..+.+..+ ...+..++| .++||.. .|..++.+|++++
T Consensus 315 Td~fieLvEa~~~~~~l~l~-tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rGVig----D~R~P~vlRfgft 380 (407)
T COG3844 315 TDYFIELVEARCEYYGLTLV-TPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRGVIG----DFREPDVLRFGFT 380 (407)
T ss_pred HHHHHHHHHhccccCCcEEe-ccchhhhccceeeEecC--------cHHHHHHHH-HHcCccc----cccCCCeeeecCc
Confidence 77777777652 2 45544 443 2445555554 455666665 6679863 3445789999994
Q ss_pred ---CChHhHHHHHHHHHHHHHHhhh
Q 038416 364 ---AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 364 ---~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+-+|+-.+++.|.+++....-
T Consensus 381 PlY~~~~DVw~AV~~L~evL~t~a~ 405 (407)
T COG3844 381 PLYVSFVDVWDAVDALEEVLDTLAW 405 (407)
T ss_pred cceechhHHHHHHHHHHHHHHhhcc
Confidence 5789999999999999987653
No 372
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.9e-10 Score=99.70 Aligned_cols=336 Identities=15% Similarity=0.099 Sum_probs=206.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEc-CChHHHHHHHHHhhcCCCC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSPEDVYLT-LGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~-~g~~~a~~~~~~~l~~~g~ 98 (387)
++..|.+|+-+.+.+...-+|+. ..-..+++....+..-+-++..-.++.|-+. -+++.|++.+..++++|++
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~ 131 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHE 131 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCC
Confidence 56677777777777654334443 2223344333333333334433334444332 3456789999999999999
Q ss_pred eEE---EcCCCCcc--hHHHhh-ccC--CCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCH-H
Q 038416 99 NIL---IPRPGYPL--YEIHAA-GSN--NNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSY-Q 168 (387)
Q Consensus 99 ~vl---~~~p~~~~--~~~~~~-~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~-~ 168 (387)
+|. +|+-+|-+ |..-.+ .|. .=.+-.++.+++..+ -+|.+.||+.... ++++++ +..+ .++. =
T Consensus 132 RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~ii-aG~S-----aY~R~~ 204 (477)
T KOG2467|consen 132 RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLII-AGTS-----AYSRLI 204 (477)
T ss_pred eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEEE-eccc-----cchhhc
Confidence 886 34444422 211111 000 011223345555555 6899999986544 455554 3322 1222 2
Q ss_pred HHHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCccc----c
Q 038416 169 HLQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ----N 243 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~----~ 243 (387)
+.+++.++|.+.|++++.|-+|. +++-.+.-+.|+..- .|+.++.+|+ +.|.|.|.|..++...-.+ +
T Consensus 205 DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g~ 277 (477)
T KOG2467|consen 205 DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQGK 277 (477)
T ss_pred cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc-----ceeecccccc--ccCCcceeEEEeccCCcCCCCCCC
Confidence 36778888889999999999987 455555444554322 2888899997 7899989988875321111 0
Q ss_pred h---hHHHHHHhhh--hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEE
Q 038416 244 S---GFVDSIKGCL--NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 244 ~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~ 318 (387)
+ ++-+++...- ..-++|.+....+++.+|++.....+....+++.+|++.+.+.|.+. |..+++.......+.+
T Consensus 278 ~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLv 356 (477)
T KOG2467|consen 278 EILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLV 356 (477)
T ss_pred cceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEE
Confidence 0 2333333221 12346777888888888888776778889999999999999999988 7776756666667777
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-----CCeEEEEe-e-----CChHhHHHHHHHHHHHHH
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-----KNWLRIAF-A-----AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~Ri~~-~-----~~~e~~~~~~~~l~~~~~ 381 (387)
++...++ + ..-++..++.-+|.++-...++. ++.+||+. + ..++||++..+-|.++++
T Consensus 357 DLr~~G~----d-GarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 357 DLRPKGV----D-GARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eccccCC----c-hHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 7765443 2 23445555655666554333332 67899998 2 357888888877776654
No 373
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.43 E-value=2.2e-10 Score=106.86 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=147.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP 130 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~ 130 (387)
..+..+.+|+.+ .++ .-++++|++.++.+++.+++++||.|+++.++|-+....+. ..|+.++++....
T Consensus 72 i~eAqe~aA~~f--------gAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gli--laGa~Pvyl~p~~ 141 (557)
T COG1982 72 IKEAQELAARVF--------GADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLI--LAGATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHHHHh--------CCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHH--HcCCceEEecCCC
Confidence 456666666666 334 66788999999999999999999999999999999888888 8999988875432
Q ss_pred CC--C--ccCChhhHHHhhcc--Cc-eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc
Q 038416 131 EK--R--WEVDLDGVEALADE--NT-VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 131 ~~--~--~~~~~~~l~~~~~~--~~-~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
.. + .+++.+.+.+++.. .. +++++++|+. -|++++ .+++++.+..+++|+.+|+++....- -.+..+-
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~-~~~~l~~ 216 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFD-FSPMLPE 216 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccccc-ccccCcc
Confidence 22 1 36788999887643 34 7889999874 788877 77888888899999999999985321 1111111
Q ss_pred cccCCCccEEEEecCcccccccccceEEEE-eeCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHH---hhhccH
Q 038416 204 GVFGSIVPVITLGSISKRWIVPGWRLGWLV-TSDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRI---VDETNE 277 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---l~~~~~ 277 (387)
... ....++++.|.+|. ++++..+.++ ..+. .. --.+++..... .+.+|+-+..+.+..+ ......
T Consensus 217 ~~~-~~~~~~~tqS~HK~--l~alSQaS~iHv~~~-~~----~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~ 288 (557)
T COG1982 217 SAL-NGGADFVTQSTHKL--LAALSQASMIHVKDG-RA----VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGR 288 (557)
T ss_pred hhh-hcCceEEEechhhh--hhhhhhhHHHhhCCC-cc----CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhH
Confidence 111 13457999999998 4555444444 4321 11 12344444432 2333333333333221 111112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
.-..+..+..-..++.+++.++.++++.++
T Consensus 289 ~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~ 318 (557)
T COG1982 289 ELWQEVIDEAIDFRKALRRLINEIGFFPVL 318 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 222333445555666666666666555544
No 374
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.33 E-value=3e-10 Score=96.03 Aligned_cols=332 Identities=13% Similarity=0.086 Sum_probs=192.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---CCCCeEEE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA---RPGANILI 102 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~g~~vl~ 102 (387)
.+|++.+|..+.+...+.+...- ..+|-+....+... + + .-+-+++++++++|+.++++... +..| |++
T Consensus 62 chp~VV~A~~kQmat~~tN~RFl---hd~lv~cA~~l~st-l--P-eLsvc~F~NSGSEANDLALRLAR~ftkhqD-vIt 133 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATISTNNRFL---HDELVQCARTLTST-L--P-ELSVCFFVNSGSEANDLALRLARNFTKHQD-VIT 133 (452)
T ss_pred CCHHHHHHHHHHHhHhcccchhh---HHHHHHHHHHHhhc-C--C-CceEEEEecCCchhhHHHHHHHHhhcccCc-eEE
Confidence 67888888888777543322222 23443333333321 1 1 23567899999999999998853 3445 455
Q ss_pred cCCCCcchHHHhh-ccCC----Cc---eeeee---ccCCCCC--c-----------cCChhhHHHhhc----cCc-eEEE
Q 038416 103 PRPGYPLYEIHAA-GSNN----NL---EARHY---DLLPEKR--W-----------EVDLDGVEALAD----ENT-VAIV 153 (387)
Q Consensus 103 ~~p~~~~~~~~~~-~~~~----g~---~~~~~---~~~~~~~--~-----------~~~~~~l~~~~~----~~~-~~v~ 153 (387)
.+..|++...... .|-+ |. ++.++ |.++.-+ + ..-.+.+++.+. ++. .+.+
T Consensus 134 ldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAf 213 (452)
T KOG1403|consen 134 LDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAF 213 (452)
T ss_pred EechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHH
Confidence 5666665332222 1111 11 11111 2211100 0 011123333332 222 2223
Q ss_pred Ee-CCCCCccccCCHHH-HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 154 II-NPGNPCGNVFSYQH-LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 154 l~-~p~nptG~~~~~~~-~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
+- +-++-.|+++|+.. .+.+++..+.+|-+.|.||++.+|..-|..+..+..++.- .-|-++.|. ..+|.+++.
T Consensus 214 iAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fi---PDIVtmgKp-mGNGhPVa~ 289 (452)
T KOG1403|consen 214 IAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFI---PDIVTMGKP-MGNGHPVAA 289 (452)
T ss_pred HHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccc---cchheeccc-CCCCCeeeE
Confidence 33 33777888877666 7999999999999999999999988777766665555432 223466799 578999999
Q ss_pred EEeeCCCCcccchhHHHHHHhh---hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGC---LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCP 307 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~ 307 (387)
++..+ ++.+.+... +..+++.+|.++++..+.+...+.+.+.+..+++-+..+.+...++. .+.+..
T Consensus 290 Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD- 360 (452)
T KOG1403|consen 290 VATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGD- 360 (452)
T ss_pred EeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceec-
Confidence 99876 788888753 12357889999999888888766666766666666555545445443 322321
Q ss_pred CCCCceEEEEEecCcccccCC---CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHH
Q 038416 308 VKPQGAMFVMVKLNVSMLEDI---GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~ 381 (387)
....|.|+-+++-+...... ..+...+..+-+.++|+++.-+. ..+.+.|-+ +.++++.++.+..|.++|.
T Consensus 361 -vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 361 -VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred -cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 23446676666533222221 12334566677778898875321 134555555 4466666666666666554
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=7.7e-10 Score=98.77 Aligned_cols=249 Identities=17% Similarity=0.111 Sum_probs=164.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHH-HHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEE--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSAR-RGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANIL-- 101 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr-~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl-- 101 (387)
..++.+.+++..+.....-..|.-..+.-.-| ..++..+. + ....+.++++++.+.|+..+..++.+++..|+
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~ 113 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSR 113 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhccCCeEEEEc
Confidence 67888999999988764222443322211111 13333332 2 33578999999999999999999987544443
Q ss_pred ---EcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCcccc--CCHHHHHHHHHH
Q 038416 102 ---IPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNV--FSYQHLQKIART 176 (387)
Q Consensus 102 ---~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~--~~~~~~~~l~~~ 176 (387)
++ ++++++.+..+ ..|.+.+.+.... .....+++.++.+++.+++-++.+|- |.. ++ .++++++
T Consensus 114 g~lV~-gg~~~v~d~~~--~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~l~---~~~l~~i 182 (395)
T COG1921 114 GELVE-GGAFRVPDIIR--LAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNY-GFTGMLS---EEELVEI 182 (395)
T ss_pred ccccc-CCCCChhHHHH--HcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeeccc-ccccccc---HHHHHHH
Confidence 23 58888999999 9999998875422 35788999999999999887777653 332 33 6778899
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-h
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-N 255 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~ 255 (387)
|+++|+++++|.+.....-.......+..+..+ .+++|-.|. +.|.+.|.|++++ ++++++++.- .
T Consensus 183 a~~~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKl--lgGPqaGii~GkK--------elI~~lq~~~l~ 249 (395)
T COG1921 183 AHEKGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKL--LGGPQAGIIVGKK--------ELIEKLQSHPLK 249 (395)
T ss_pred HHHcCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchh--cCCCccceEechH--------HHHHHHHhhhhh
Confidence 999999999999997654322222223333333 888899998 5678899999987 8998887652 3
Q ss_pred ccCCcchHHHHHHHHHhhhccH----HHHHHHHHHHHHHHHHHHHHhhcC
Q 038416 256 AASHPVTFIQAAVPRIVDETNE----AFFAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
+.........+++..+|+.... .........+.+-.+.+.+..+.+
T Consensus 250 Ralrv~K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l 299 (395)
T COG1921 250 RALRVDKETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLAQAGRL 299 (395)
T ss_pred hhhhcCcHhHHHHHHHHHHHcCchhhhhhhHHHHhhccHHHHHHHHhhhh
Confidence 4556667777777777765332 222333333334444444444433
No 376
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.23 E-value=3.5e-09 Score=92.77 Aligned_cols=177 Identities=18% Similarity=0.267 Sum_probs=107.8
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcCCCCeEEEc-CCCCcchHHHhh------c--cCCCcee
Q 038416 56 RRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLARPGANILIP-RPGYPLYEIHAA------G--SNNNLEA 123 (387)
Q Consensus 56 r~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~~~~~~------~--~~~g~~~ 123 (387)
|+.+-+-+.+.++ .++.++ -.|+|+|+..++..+++|||+++.. ..-|.......- + ..+|+..
T Consensus 56 Rd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y 131 (403)
T PF06838_consen 56 RDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKY 131 (403)
T ss_dssp HHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EE
T ss_pred HHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCcee
Confidence 4444444444333 344444 2568999999999999999999864 444443333332 1 1456667
Q ss_pred eeeccCCCCCccCChhhHHHhhccCceEEEEeCC-CCCccccCCHHHHHHHHHHHHhc--CcEEeecccccccccCCCCC
Q 038416 124 RHYDLLPEKRWEVDLDGVEALADENTVAIVIINP-GNPCGNVFSYQHLQKIARTARNL--GIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p-~nptG~~~~~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~~~~ 200 (387)
..+++. ++..+|++.+++++++++++|++.-. ...+=..++.++++++++..++. ++.+++|.+|++|.-... +
T Consensus 132 ~~v~L~--~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E-P 208 (403)
T PF06838_consen 132 REVPLT--EDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE-P 208 (403)
T ss_dssp EE--B---TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS--G
T ss_pred EEEeec--CCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC-c
Confidence 777775 34478999999999999999998865 33344458889999999998864 789999999999873321 2
Q ss_pred ccccccCCCccEEEEecCcccccccc--cceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 201 VPMGVFGSIVPVITLGSISKRWIVPG--WRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~~~g--~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
.. ...| +..+|+=|.-| .| .--||++++. +++++.....
T Consensus 209 ~~---vGAD---l~aGSLIKNpG-GgiAptGGYIaGr~--------~lVe~~a~RL 249 (403)
T PF06838_consen 209 TE---VGAD---LMAGSLIKNPG-GGIAPTGGYIAGRK--------DLVERAAYRL 249 (403)
T ss_dssp GG---GT-S---EEEEETTSGGG-TTT-SS-EEEEESH--------HHHHHHHHHH
T ss_pred cc---cchh---heeccceeCCC-CCccCcCCEEechH--------HHHHHHHhhh
Confidence 22 2333 88999999853 22 3468999876 7888776544
No 377
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.18 E-value=1.6e-10 Score=91.54 Aligned_cols=82 Identities=23% Similarity=0.406 Sum_probs=71.1
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 22 SLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLP--YKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
+++.+++.+.+++.+. ..|.+..|..+||+++|+|+.+.++ ..+++++|++|+|+++++..++.+++++||.
T Consensus 70 ~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~ 143 (153)
T PLN02994 70 ADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDA 143 (153)
T ss_pred cccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCE
Confidence 4777777777766663 2477778999999999999999877 5678999999999999999999999999999
Q ss_pred EEEcCCCCcc
Q 038416 100 ILIPRPGYPL 109 (387)
Q Consensus 100 vl~~~p~~~~ 109 (387)
|+++.|+|++
T Consensus 144 VlVp~P~Y~~ 153 (153)
T PLN02994 144 FLVPTPYYAA 153 (153)
T ss_pred EEEeCCCCCC
Confidence 9999999963
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.17 E-value=3.3e-08 Score=88.79 Aligned_cols=322 Identities=11% Similarity=0.040 Sum_probs=188.2
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCC-------CCCCEEEcCChHHHHHHHHHhhc-------CCC-----------C-eEEE
Q 038416 49 TLGVPSARRGIADYLNRDLPYKL-------SPEDVYLTLGCSQAIEISLSVLA-------RPG-----------A-NILI 102 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~~~-------~~~~i~~~~g~~~a~~~~~~~l~-------~~g-----------~-~vl~ 102 (387)
.+-..+|+..+.+|+.+.++.+. .+..=++..+++++...++.+.. +.+ + .+.+
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 34568999999999988776431 12223344445555555554421 111 1 3446
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCc-----eEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT-----VAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
.+.+|.+....+. ..+.++..++.+. +++++.+.|.++++++. ..+++.+. .-||.+ .-+++.+|..+|
T Consensus 188 SDqahssveka~~--i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~c-a~D~l~elg~Vc 261 (511)
T KOG0628|consen 188 SDQAHSSVEKACL--IAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSC-AFDELEELGPVC 261 (511)
T ss_pred cCcccchHHHhHh--hcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccc-ccccHHHhcchh
Confidence 7889999999888 8899988888753 88999999999996531 22222222 224433 237899999999
Q ss_pred HhcCcEEeecccccccccCCCCCcccc-ccCCCccEEEEecCcccccccccceEEEEeeCCCCcc----cchhHHHHHHh
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMG-VFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL----QNSGFVDSIKG 252 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~----~~~~~~~~~~~ 252 (387)
+++|+|+++|.+|++-.+....+..+. .++.-+ -+-...||+ ++--+.+..+-..+...+. -+|.+.+.-..
T Consensus 262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred hhcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhh
Confidence 999999999999997555443333321 111111 112345666 3444555554444321110 01222111111
Q ss_pred hhh----ccCCcchHHHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 253 CLN----AASHPVTFIQAAVPRI--VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 253 ~~~----~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
... ...-|..-....+..+ +....-+.+.+..++..+.++.+.+.+.+-+.+++.....-|. +++++...+
T Consensus 339 ~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~N-- 415 (511)
T KOG0628|consen 339 GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL-VCFRLKGDN-- 415 (511)
T ss_pred ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce-eEEeecCCc--
Confidence 000 0001111111222222 2222346677777777888888877777777888664455554 444554321
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.....++.++-....|.+.|... ...-.+|++++ ++.++++.+.+.|.+....+..
T Consensus 416 --~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 416 --EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred --HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 13457777776777788887542 22346899984 4678999999999988877543
No 379
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.14 E-value=6.9e-08 Score=96.67 Aligned_cols=309 Identities=14% Similarity=0.122 Sum_probs=175.2
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCC-----C----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTL-----G----VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~-----~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
.-.|+.+.+.+.+.-+ .+..|.|.+ | .-++...++++. +.+..+.-+..++|.+.++++.+..
T Consensus 76 ~~~p~~i~r~v~~~p~--~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~ 147 (939)
T TIGR00461 76 TILPPVIQRNLLENPG--WYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFN 147 (939)
T ss_pred CcCChHHHHHHHhCch--hhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHH
Confidence 3356666654443211 133455432 3 234455566666 4566788888888888887776642
Q ss_pred ---CCCCeEEEcCCCCcchHHHhh--ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 ---RPGANILIPRPGYPLYEIHAA--GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 ---~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+++++|++++..|+.+...++ ....|++++.++ +++|++.+ ++.++++.+|+. .|.+ ++
T Consensus 148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed 211 (939)
T TIGR00461 148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYPAT-DGSI---LD 211 (939)
T ss_pred hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECCCC-CeEE---ec
Confidence 234789999999987663333 115677777653 34565555 467778888875 8888 46
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc----cccceEEEEeeCCCCc-----
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV----PGWRLGWLVTSDPNGI----- 240 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~----~g~r~G~i~~~~~~~~----- 240 (387)
+++|++++++.|.+++++.-...+. ...+...+..| |++++-.+ ||. +|.-.|++.+++.-..
T Consensus 212 ~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~~q~-fg~p~g~GGP~aG~~a~~~~l~r~lPgr 283 (939)
T TIGR00461 212 YKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGSSQR-FGVPMGYGGPHAAFFAVKDEYNRKMPGR 283 (939)
T ss_pred HHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeCCCc-cCCCCCCCCCceeeeeecHhhHhhCCCC
Confidence 9999999999999999854333221 11222233333 44553322 232 3444666665441100
Q ss_pred --------ccchhHH-------HHHHhhhhcc-CCcchHHHHH-HHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 241 --------LQNSGFV-------DSIKGCLNAA-SHPVTFIQAA-VPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 241 --------~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
.+++.+. ..+++.+.++ .+.+....+. +...+.-+..+.++++.++...++.++.+.|++. |
T Consensus 284 ivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G 362 (939)
T TIGR00461 284 IVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-P 362 (939)
T ss_pred ceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 0000000 0011111111 1111112221 1112333456789999999999999999999885 7
Q ss_pred CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHH
Q 038416 304 ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIK 377 (387)
Q Consensus 304 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~ 377 (387)
++... +....-+.++++. .+..++...+ .++||.+... ..+.+++|+ .+++++++.+++.+.
T Consensus 363 ~~~~~-~~fF~~~~v~~~~------~~~~~i~~~~-~~~gi~l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 363 HELIN-KTWFDTLTVKVGN------GISSELLKAA-EEFNINLRAV----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CcccC-CCccceEEEEeCC------CCHHHHHHHH-HHCCCeeeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 88553 3111122333321 1345666665 5569987653 246899999 468999999999884
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.08 E-value=1.1e-07 Score=85.03 Aligned_cols=315 Identities=16% Similarity=0.078 Sum_probs=187.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC-hHHHHHHH---HHhh-cCCC----CeEEEcCCCCcchHHHhhccCCC
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLG-CSQAIEIS---LSVL-ARPG----ANILIPRPGYPLYEIHAAGSNNN 120 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~a~~~~---~~~l-~~~g----~~vl~~~p~~~~~~~~~~~~~~g 120 (387)
+|+.++-..+.+|+.+.-| -|.|-+.+. ++++=.+- ++.. ...| +.+++++..|....-.+. ..|
T Consensus 105 qG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAa--m~G 178 (496)
T COG1003 105 QGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAA--MAG 178 (496)
T ss_pred HHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHh--hcC
Confidence 4777888888889877433 355655432 23333322 2232 2222 589999999987777788 899
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPY 200 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~ 200 (387)
++++.++.+. +..+|+++|++.+.+++.++.+++|+. .|+. .+.+++|+++.+++|..|..|.+--....+-..+
T Consensus 179 ~~VV~V~~~~--~G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP 253 (496)
T COG1003 179 FKVVVVKCDE--NGNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLARP 253 (496)
T ss_pred ceEEEEecCC--CCCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhccccc
Confidence 9999999864 347899999999999999999999985 6665 4669999999999999999999877544332222
Q ss_pred ccccccCCCccEEEEecCccccc----ccccceEEEEeeCCC-Ccccchh----HHH---H-HHh--h-hhccCCcchHH
Q 038416 201 VPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPN-GILQNSG----FVD---S-IKG--C-LNAASHPVTFI 264 (387)
Q Consensus 201 ~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~-~~~~~~~----~~~---~-~~~--~-~~~~~~~~~~~ 264 (387)
..+ ..+ ++=.-++|.|. ..|...|-+.+...- ...-.|. ..+ . -.. . ....+..+...
T Consensus 254 Gd~---G~D---V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i 327 (496)
T COG1003 254 GDM---GFD---VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI 327 (496)
T ss_pred ccc---ccc---eEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH
Confidence 222 221 22234666663 334445555442100 0000000 000 0 000 0 00011122222
Q ss_pred HHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 265 QAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 265 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
.......+.-...+.+++.-+...-+++++.++|+.. ..+...+. ...=+.+.......+......+++.+| -++
T Consensus 328 l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrL-lD~ 404 (496)
T COG1003 328 LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRL-LDY 404 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHH-Hhc
Confidence 2223333333456778888888889999999999962 22121222 122223333321111112556777776 567
Q ss_pred CeEEEcCCccC--CCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 343 SVIILPGRTVG--MKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 343 gi~v~~g~~~~--~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
|+.- |-..|. ..+.+-|=+. -+++++++.++++.++.++.++
T Consensus 405 GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 405 GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9875 334454 3677777773 4678999999998888777654
No 381
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.06 E-value=1.2e-07 Score=87.01 Aligned_cols=282 Identities=18% Similarity=0.181 Sum_probs=142.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---CCCCeEEEcCCCCcchHHHhh--ccCCCceeeeecc
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA---RPGANILIPRPGYPLYEIHAA--GSNNNLEARHYDL 128 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~ 128 (387)
++...++++. +.+..+.-+-.+++.+-++++.+.. +++++|+++...|+.+...++ ....|++++.++.
T Consensus 114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~ 187 (429)
T PF02347_consen 114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL 187 (429)
T ss_dssp HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence 4455555555 3333445566677766666655542 334699999999998876433 1157888888877
Q ss_pred CCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC
Q 038416 129 LPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208 (387)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 208 (387)
.... ..| ++++.+|++.+|+. .|.+ +++++|.++++++|.++++ .+.- ....+ ..+-..+..
T Consensus 188 ~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad~-~aL~~--l~~Pge~GA 249 (429)
T PF02347_consen 188 DEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GADP-NALGG--LKSPGEYGA 249 (429)
T ss_dssp BTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGGC-CGCCT--C--GGGGT-
T ss_pred cccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecCH-HHHhC--cCChhhcCc
Confidence 5332 223 56889999999986 7888 5599999999999998886 3322 11111 222233443
Q ss_pred CccEEEEecCccccc----ccccceEEEEeeCCCCcc--------------cchhH-------HHHHHhhhhcc-CCcch
Q 038416 209 IVPVITLGSISKRWI----VPGWRLGWLVTSDPNGIL--------------QNSGF-------VDSIKGCLNAA-SHPVT 262 (387)
Q Consensus 209 ~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~--------------~~~~~-------~~~~~~~~~~~-~~~~~ 262 (387)
| +++++ +|.|| .+|.-+|++.+++.- .. +++.+ -..+++.+.++ .+.+.
T Consensus 250 D---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l-~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnq 324 (429)
T PF02347_consen 250 D---IVVGE-HQTFGIPMGFGGPGAGFFAVREDL-VRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQ 324 (429)
T ss_dssp S---EEEEC-CTTTT---CCC-S--EEEEE-GGG-GGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-
T ss_pred c---EEeeC-CCCCcccCCCCCCCeeeEEEhhhh-hhhCCCceecccccccccceeeeccccccccccccchhhhhhhhH
Confidence 3 55665 66665 345667888776521 00 00000 00112222111 12222
Q ss_pred HHH-HHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHh
Q 038416 263 FIQ-AAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKE 341 (387)
Q Consensus 263 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (387)
... .++...+.....+.+.+..+....++.++.+.|+++.+.. +..+.---++....+ . ....++++
T Consensus 325 aL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~~~~~f~e~v~~~~~---------~-~~~~~l~~- 392 (429)
T PF02347_consen 325 ALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-FDNPFFFEFVVVFSK---------D-KEVEELLK- 392 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-SSSSSBSSEEEEESS-----------HHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cCCCCceeeeeecCC---------c-HHHHHHHH-
Confidence 222 2233344445678899999999999999999999863444 212222222222221 1 22222322
Q ss_pred cCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHH
Q 038416 342 ESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERI 376 (387)
Q Consensus 342 ~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l 376 (387)
+++.-.-+..+...+++-+++. .++++++++++.+
T Consensus 393 ~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 393 RGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp TT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 2333221111222458888883 5789999998764
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.05 E-value=1.4e-07 Score=82.25 Aligned_cols=313 Identities=16% Similarity=0.136 Sum_probs=189.2
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-----CCCeEEEcCCCCcch-HHHhhccC
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-----PGANILIPRPGYPLY-EIHAAGSN 118 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~g~~vl~~~p~~~~~-~~~~~~~~ 118 (387)
.|..+.++..|+.++.+.++ -+.++.|.-+..|=++.+..+++ ||.+.+++.+.|+.. +...+ .
T Consensus 74 AYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~--~ 143 (471)
T COG3033 74 AYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ--I 143 (471)
T ss_pred hhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH--h
Confidence 57777788888888888772 36777787777777777776664 455666666777654 44455 5
Q ss_pred CCceeeeeccCCCCC--------ccCChhhHHHhhcc----CceEEEEeC-CCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 119 NNLEARHYDLLPEKR--------WEVDLDGVEALADE----NTVAIVIIN-PGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~--------~~~~~~~l~~~~~~----~~~~v~l~~-p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
.|..+..++++...+ ..+|++.|++.+++ +...|+++- .|...|+..|.+.+++..++|++|+++++
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv 223 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVV 223 (471)
T ss_pred cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEE
Confidence 677777666543221 24688999998864 344454443 35588999999999999999999999999
Q ss_pred ecccccc-cccC----CCCCc--cc-------cccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 186 ADEVYNH-LAFG----STPYV--PM-------GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 186 ~D~~~~~-~~~~----~~~~~--~~-------~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
.|.+-.- -.|- ..++. ++ .++.+ -.+.|..|. ++..+ .|++...|++ .+ ++....+
T Consensus 224 ~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD----~~~mS~KKD-~lvnm-GGfl~~~D~~-~f---Dvy~~~~ 293 (471)
T COG3033 224 MDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD----GCTMSAKKD-GLVNM-GGFLCFKDDS-FF---DVYEECR 293 (471)
T ss_pred eehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh----hheeecccc-ceecc-ccEEEecCcc-HH---HHHHHHH
Confidence 9976431 1110 01111 11 11111 345577787 54433 2666666532 11 3444444
Q ss_pred hhh---h---ccCCcchHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc-
Q 038416 252 GCL---N---AASHPVTFIQAAVPRIVDE-TNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS- 323 (387)
Q Consensus 252 ~~~---~---~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~- 323 (387)
... . ..++.+.-...+++.-|.+ ....|+..++.+++.. .+.|.+. |+.++ .|.+|.-++++..+.
T Consensus 294 ~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL----~~~l~~~-GVpi~-~paGGHavfvda~~~l 367 (471)
T COG3033 294 TLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYL----ADGLEEA-GVPIV-QPAGGHAVFVDAGKFL 367 (471)
T ss_pred hheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHH----HHHHHhc-CCeeE-ecCCCceEEeehhhhc
Confidence 321 1 1122233334444444443 2357777777666654 4566666 77634 788888888765331
Q ss_pred -ccc-CCCcHHHHHHHHHHhcCeEEEcCCccCC-------------CCeEEEEee---CChHhHHHHHHHHHHHHHHh
Q 038416 324 -MLE-DIGDDLEFCLKLAKEESVIILPGRTVGM-------------KNWLRIAFA---AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 324 -~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~ 383 (387)
..| +--.+..++.+|.++.||-..--+.|.. -.-+|+.+- -+.+-++-.++.++++.+.-
T Consensus 368 phip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 368 PHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred CCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 111 1113567788888899998764333321 146999993 37788888888887776554
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.01 E-value=5.9e-10 Score=98.67 Aligned_cols=251 Identities=17% Similarity=0.146 Sum_probs=54.4
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCc-----HHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGV-----PSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~-----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
+.++.+.+++.+...+-.-..|.-..|. ..+.+.++... ..++.+++++...|+..++.++.. |..
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la~-~~E 87 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLAK-GKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccccccccccccc-ccc
Confidence 6778888888877653111123221111 22233333332 567888888889999999998863 556
Q ss_pred EEEcCC------CCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC--ccccCCHHHHH
Q 038416 100 ILIPRP------GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP--CGNVFSYQHLQ 171 (387)
Q Consensus 100 vl~~~p------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np--tG~~~~~~~~~ 171 (387)
|++..- +-+.+.+.++ ..|.+++.+-... ...+++.+++++++|.+++..+++|- .|..-. -.++
T Consensus 88 vIvsRGelVeiGgsFRip~vm~--~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~ 160 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMR--QSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLE 160 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc--ccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHH
Confidence 665432 2223556777 7888888775422 34678889999999999999998774 332211 2489
Q ss_pred HHHHHHHhcCcEEeecccccccc----cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLA----FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++++++|++++++|...+.+. +.-.....+..+-..+-.+++.|-.|. +.|.+.|.+++.+ +++
T Consensus 161 el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKl--LGGPQaGiI~Gkk--------~lI 230 (367)
T PF03841_consen 161 ELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKL--LGGPQAGIIVGKK--------ELI 230 (367)
T ss_dssp HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSS--SSS-S-EEEEEEH--------HHH
T ss_pred HHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCc--CCCCCeEEEEeCH--------HHH
Confidence 99999999999999998875432 111112223333333334888888898 5567789999987 899
Q ss_pred HHHHhhh-hccCCcchHHHHHHHHHhhhccH-----------HHHHHHHHHHHHHHHHHHHHhhcC
Q 038416 248 DSIKGCL-NAASHPVTFIQAAVPRIVDETNE-----------AFFAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
+++++.. ............++.+.|+.+.. ..+....+.++.+++.+...|+..
T Consensus 231 ~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 231 EKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred HHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 9998752 34556677777777776664321 234455566666666666666653
No 384
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.96 E-value=4.5e-07 Score=79.74 Aligned_cols=317 Identities=13% Similarity=0.069 Sum_probs=178.4
Q ss_pred CCcHHHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 25 SDSTVAEDAVVDALRTAH--------YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
-.|+++++..++-+.+-. .+|.+. ....+-+...+.+++.++++-+.+=+++-.|++....++...|+.+
T Consensus 15 ~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk--~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~ 92 (365)
T COG1932 15 ALPPEVLQQAQKELLDWNGLGMSVMEISHRSK--EFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGK 92 (365)
T ss_pred cCCHHHHHHHHHHHhhhccCCcceeeeccccH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcc
Confidence 467777777776655421 122222 2233334444445555565544433445566799999999999865
Q ss_pred CCe--EEEcCCCCcchHHHhhccCCCceeeeec-cCCCCCcc--CChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 97 GAN--ILIPRPGYPLYEIHAAGSNNNLEARHYD-LLPEKRWE--VDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 97 g~~--vl~~~p~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~--~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
+.. |..-...-.++. .++ ..+.++.... ...+.+++ ++++.+. +.++..-|.+|+-..-+|+-++. ..
T Consensus 93 ~~~~yv~~g~Ws~~a~~-eA~--~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~--~p 165 (365)
T COG1932 93 RGTDYVDTGAWSEFAIK-EAK--KVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPE--LP 165 (365)
T ss_pred cCceeEeeeehhHhHHH-HHH--HhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccC--CC
Confidence 432 433333333333 233 3443221111 11122222 2222222 33343337777767788988762 11
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
.+.. +.++|+|.+..-+. ...++..++ ++-.+..|.+|..| ++.++.++ +.+++..
T Consensus 166 ~~~~-----~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~--------~~l~r~~ 221 (365)
T COG1932 166 DIGS-----DGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP--------DLLERAE 221 (365)
T ss_pred CCCC-----CceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH--------HHHhccc
Confidence 1111 27889998877543 223343343 66678999999998 88888876 4555554
Q ss_pred hh------------h--hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC--Cce
Q 038416 252 GC------------L--NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCP-VKP--QGA 313 (387)
Q Consensus 252 ~~------------~--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~g 313 (387)
.. . ....+|+.+..+.+...++... +..++...++-+..++.+.+.+++- ++... ..+ .+-
T Consensus 222 ~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~ 300 (365)
T COG1932 222 SYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSR 300 (365)
T ss_pred ccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-Cccccccchhhccc
Confidence 32 0 1234667777776666665533 4667778888888888898888875 33211 112 233
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+-+.+++.... -+..++.++ +++|+...-|. ...+.+|+++. .+.++++.+++-++.+.+++
T Consensus 301 mnV~f~~~~~~-----ld~~fv~ea-e~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 301 MNVTFTLVDAE-----LDKGFVAEA-EAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eeEEEEcCcHH-----HHHHHHHHH-HHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 34444554321 123455544 66788877772 23456999994 57899999999888877654
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.91 E-value=1.6e-07 Score=84.20 Aligned_cols=288 Identities=14% Similarity=0.123 Sum_probs=143.3
Q ss_pred CCEEEcCChH-HHHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCC-ccCChhhHHHhhcc--
Q 038416 74 EDVYLTLGCS-QAIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKR-WEVDLDGVEALADE-- 147 (387)
Q Consensus 74 ~~i~~~~g~~-~a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~-- 147 (387)
...++++-+| ..+.+.+.++. ..++.|+.+.-.+.+....+. ..|++++.++...+.+ ...|.+.+++.+++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~--~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G 152 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIE--RAGLEPVVVENVLEGDELITDLEAIEAKIEELG 152 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHH--HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHC
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHH--hcCCeEEEeeccCCCCeeeccHHHHHHHHHHhC
Confidence 3455554433 33444444453 456899999888888888888 8999999988543333 34467777777643
Q ss_pred -CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC-CCCccccccCCCccEEEEecCccccccc
Q 038416 148 -NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS-TPYVPMGVFGSIVPVITLGSISKRWIVP 225 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~sK~~~~~ 225 (387)
...+.+++.++---+.. ++++++|+++|++||++.|+..+|+.=...- +.......... -.+++.|.-|.|..|
T Consensus 153 ~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GR--vda~vqS~dkNF~VP 228 (389)
T PF05889_consen 153 ADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGR--VDAFVQSTDKNFMVP 228 (389)
T ss_dssp GGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHST--CSEEEEEHHHHHCEE
T ss_pred CCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCC--cceeeeecCCCEEec
Confidence 45666777664333333 1459999999999999999999998400000 00000000000 016788999998644
Q ss_pred ccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh----cC
Q 038416 226 GWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK----EI 301 (387)
Q Consensus 226 g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~ 301 (387)
..-+.|.+.+ |.++..+.+.+..-... .+.......++.-+. ..+............++.+.|+ +.
T Consensus 229 -vGgai~As~~-------~~~i~~vs~~YpGRas~-sp~ld~~itLl~LG~-~g~~~ll~~r~~~f~~l~erl~~~aee~ 298 (389)
T PF05889_consen 229 -VGGAIMASFD-------PSGILAVSKEYPGRASA-SPSLDLFITLLSLGC-TGYGALLKERKASFPYLKERLKKWAEEV 298 (389)
T ss_dssp -SSHEEEEESS-------HHHHHHHHHTSHSHBTS-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEecC-------HHHHHHHHHHhhhhhhc-ccchHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2224444433 56888777765311112 222333333333222 1222222222222222222222 22
Q ss_pred CCCCCCCCCCceEEEEEecCcccccCC--CcHHHHHHHHHHhcCeE----EEcCCcc-------CCCCeEEEEe--eCCh
Q 038416 302 PCITCPVKPQGAMFVMVKLNVSMLEDI--GDDLEFCLKLAKEESVI----ILPGRTV-------GMKNWLRIAF--AAEP 366 (387)
Q Consensus 302 ~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~----v~~g~~~-------~~~~~~Ri~~--~~~~ 366 (387)
+-.+...|..-..+.+.++. +... .+...+..+ |..+||. +.++... ....++-++. +.++
T Consensus 299 -~e~ll~~p~N~is~a~tl~~--l~~~~~k~~~~lgs~-Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ 374 (389)
T PF05889_consen 299 -GERLLETPRNHISMAFTLDT--LYEISQKDGTFLGSM-LFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTR 374 (389)
T ss_dssp -TEEBSSSTT-SSEEEEE-TT--CCTCCSSHHHHHHHH-HHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--H
T ss_pred -hhhhcCCCCCCeeEEEECcc--chhhccchhhhHHHH-HHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCH
Confidence 11112234333333444442 1111 123344444 4666764 2232211 1136777744 6799
Q ss_pred HhHHHHHHHHHHHHH
Q 038416 367 ATLEDGLERIKAFCQ 381 (387)
Q Consensus 367 e~~~~~~~~l~~~~~ 381 (387)
||++..+++|+++++
T Consensus 375 eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 375 EEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999875
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.90 E-value=1e-07 Score=84.77 Aligned_cols=320 Identities=12% Similarity=0.079 Sum_probs=175.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------CCC-----CeEE-EcCCCCcc
Q 038416 43 YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------RPG-----ANIL-IPRPGYPL 109 (387)
Q Consensus 43 ~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~~g-----~~vl-~~~p~~~~ 109 (387)
..-|...++....++.+-+...+..|+....|.|+.-.|+..-+.++..+-- ..| +-|+ +.+-+|++
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 3355554554455555555555555655554555554444444444333311 122 2333 46789999
Q ss_pred hHHHhhccCCCce---eeeeccCCCCCccCChhhHHHhhccC--ceEE-EEeCC---CCCccccCCHHHHHHHHHHHHhc
Q 038416 110 YEIHAAGSNNNLE---ARHYDLLPEKRWEVDLDGVEALADEN--TVAI-VIINP---GNPCGNVFSYQHLQKIARTARNL 180 (387)
Q Consensus 110 ~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v-~l~~p---~nptG~~~~~~~~~~l~~~~~~~ 180 (387)
+...++ .+|+. ++.++.+ ...++++++||+.+-.. ...+ ++.+. +.--|.. +++..++++|++|
T Consensus 210 i~kaAa--~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~ 282 (510)
T KOG0629|consen 210 IKKAAA--FLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKH 282 (510)
T ss_pred HHHHHH--HhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhc
Confidence 999999 88854 5555654 33489999999976431 1111 22333 4455655 6699999999999
Q ss_pred CcEEeecccccccc-cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh------
Q 038416 181 GIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC------ 253 (387)
Q Consensus 181 ~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------ 253 (387)
++|+++|.++++.. .+.....-+......+ -+..+.+|.. ...++++..+.+..+ +..+-.+.
T Consensus 283 ~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~~-gaplqCsa~l~r~~g-------ll~~Cn~~~A~YLF 352 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKLM-GAPLQCSAFLTREEG-------LLQRCNQMSAIYLF 352 (510)
T ss_pred CEEEEeecccccccccChhhHhhccCccccC--ceeecHHHhh-cCcchhhHHHHHHHH-------HHHhhcccchhhhh
Confidence 99999999998622 2211111122222211 3345889995 445788888776522 11111110
Q ss_pred -----hhccC-CcchHHHH-----HHHH--HhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CCceEEEEE
Q 038416 254 -----LNAAS-HPVTFIQA-----AVPR--IVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK--PQGAMFVMV 318 (387)
Q Consensus 254 -----~~~~~-~~~~~~~~-----~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~g~~~~~ 318 (387)
+..+. +..-..|- +..- +++......+++.++++-++++++.+.|++-++...+.. |+..++.+-
T Consensus 353 q~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw 432 (510)
T KOG0629|consen 353 QQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFW 432 (510)
T ss_pred ccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeec
Confidence 00000 11111110 1111 122233567889999999999999999999877555544 454444443
Q ss_pred ecCcccccCCCcHH-----------HHHHHHHHhcCeEEEcCCccC-CCCeEEEEee---CChHhHHHHHHHHHHHHH
Q 038416 319 KLNVSMLEDIGDDL-----------EFCLKLAKEESVIILPGRTVG-MKNWLRIAFA---AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 319 ~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~g~~~~-~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~ 381 (387)
..|.. +.+..... .+-.+++++ |-.-......+ .++.||+.++ .+.++++-+++.|..+-+
T Consensus 433 ~vp~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 433 YVPPS-LRGWQENPERDSRLVKVAPKIKERMMKK-GTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred cCchH-hccCcccchhhhHHHhhCcHHHHHHHhc-cceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 33331 22222211 223334343 54433322222 2578999994 367899999998876543
No 387
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.86 E-value=1.5e-06 Score=75.71 Aligned_cols=213 Identities=14% Similarity=0.091 Sum_probs=116.2
Q ss_pred hhHHHhhcc-----CceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCc
Q 038416 139 DGVEALADE-----NTVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIV 210 (387)
Q Consensus 139 ~~l~~~~~~-----~~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~ 210 (387)
+++|+.+.. ++++.+++.| ++..|. -.|++..+.|.++|++|++.+|+||++.+.+-.|.-+.. ...++..
T Consensus 256 ~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P- 334 (484)
T KOG1405|consen 256 AEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP- 334 (484)
T ss_pred HHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC-
Confidence 455555532 4667777888 666776 589999999999999999999999999986655542221 2223332
Q ss_pred cEEEEecCcccccccccceEEEEeeCCCCcccchhHHH-HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHH
Q 038416 211 PVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD-SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKE 289 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 289 (387)
.-+-+|||-|-.+ ||..-. +++- ...+..+ ++-..|.-...+.++++...++-+-.. .+.
T Consensus 335 --pD~vTFSKK~q~g----Gffh~~---------~frpn~pYrifN-TWmGdP~k~lll~~vv~~I~~~~Ll~n---~~~ 395 (484)
T KOG1405|consen 335 --PDVVTFSKKFQTG----GFFHDE---------EFRPNEPYRIFN-TWMGDPSKNLLLEEVVQEIKREDLLNN---VAH 395 (484)
T ss_pred --ccceehhhhhhcC----ccccCc---------ccCCCchHHHhh-hhcCChHHHHHHHHHHHHHhHHHHHHH---HHH
Confidence 2344799997544 443321 1111 0111222 222333333334444443222323222 222
Q ss_pred HHHHHHHHhh----cCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-
Q 038416 290 TADICYERIK----EIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA- 364 (387)
Q Consensus 290 ~~~~~~~~l~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~- 364 (387)
.-+.+...|. +.|+.-.. ...-|-|+..+++.. ...+.+...++..|+.+...+ ...+|+.++.
T Consensus 396 vG~~l~~gL~~Lq~~~p~~~~~-~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GGCg----~~siRfRPsLv 464 (484)
T KOG1405|consen 396 VGKALLKGLLELQAKYPGKINN-LRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGGCG----DKSIRFRPSLV 464 (484)
T ss_pred HHHHHHHHHHHHHHhCchhhhc-ccccceEEEEeCCCh------HHHHHHHHHHHHcCceecccc----cceeeecccee
Confidence 2333333333 35553312 333455766677753 223334445577798775542 4567777753
Q ss_pred -ChHhHHHHHHHHHHHHHH
Q 038416 365 -EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 365 -~~e~~~~~~~~l~~~~~~ 382 (387)
.+.-.+-.++++.+.+..
T Consensus 465 f~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 465 FRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ehhhhHHHHHHHHHHHhcc
Confidence 566666677777776654
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.79 E-value=2.6e-07 Score=78.53 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=108.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCC-CCcchHHHhh------cc--CCC
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP-GYPLYEIHAA------GS--NNN 120 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p-~~~~~~~~~~------~~--~~g 120 (387)
.|...|.+.-|+-+ +.....-+..+.+ +|+|+.+++..+++|||..+...- -|....+..- .| ..|
T Consensus 65 ~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 65 LGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred cchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 35455555555554 3222222444555 689999999999999999876433 3332233222 11 344
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC-CccccCCHHHHHHHHHHHHhc--CcEEeecccccccccCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN-PCGNVFSYQHLQKIARTARNL--GIIVIADEVYNHLAFGS 197 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n-ptG~~~~~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~ 197 (387)
+....+|+. .+.++|.+.+..+++++||+|.+..... ..--.++.++++++++..++. |+++++|.+|++|.-..
T Consensus 140 i~Y~~v~Lt--~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~ 217 (416)
T COG4100 140 IKYKAVPLT--ADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK 217 (416)
T ss_pred cceeecccc--cCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence 555556664 3448999999999999999998876521 111237889999999998865 68999999999987432
Q ss_pred CCCccccccCCCccEEEEecCccccccccc--ceEEEEeeC
Q 038416 198 TPYVPMGVFGSIVPVITLGSISKRWIVPGW--RLGWLVTSD 236 (387)
Q Consensus 198 ~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~--r~G~i~~~~ 236 (387)
.+..+ .. .+..+|+-|. ...|+ --||+.+..
T Consensus 218 -EPt~v---Ga---DliAGSLIKN-pGGgiaktGGYiaGk~ 250 (416)
T COG4100 218 -EPTHV---GA---DLIAGSLIKN-PGGGIAKTGGYIAGKA 250 (416)
T ss_pred -Ccccc---ch---hhhccceeeC-CCCceeeccceeechH
Confidence 22222 11 2566788887 22221 247777654
No 389
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.76 E-value=4.8e-05 Score=68.46 Aligned_cols=287 Identities=17% Similarity=0.138 Sum_probs=160.2
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---CCCCeEEEcCCCCcchHHHhhcc--CCCceeeeeccCC
Q 038416 56 RRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA---RPGANILIPRPGYPLYEIHAAGS--NNNLEARHYDLLP 130 (387)
Q Consensus 56 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~g~~vl~~~p~~~~~~~~~~~~--~~g~~~~~~~~~~ 130 (387)
...++++. +.+-.+.-+-.++|.+-++++.+.. ++.++++++..+|+.+...++-. -.|.++..++.+
T Consensus 126 Qtlv~dLT------Gm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~- 198 (450)
T COG0403 126 QTLVADLT------GLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD- 198 (450)
T ss_pred HHHHHHHh------CCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-
Confidence 44555555 3444555566677766666666653 33589999999999887777611 234455544432
Q ss_pred CCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee--cccccccccCCCCCccccccCC
Q 038416 131 EKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA--DEVYNHLAFGSTPYVPMGVFGS 208 (387)
Q Consensus 131 ~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~--D~~~~~~~~~~~~~~~~~~~~~ 208 (387)
|.+.+++..+.++.++++..|+. .|.. ..+++++++.+++++.++++ |-..-.+ ..+-..+..
T Consensus 199 ------d~~~l~~~~~~~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~L------L~pPGe~GA 263 (450)
T COG0403 199 ------DLDDLESADDGDVFGVLVQYPNT-FGIV--EEDLRALIEAAHSAGALVIVAADPLALGL------LKPPGEFGA 263 (450)
T ss_pred ------hhhhhhhccccCeEEEEEecCCC-CCcc--chhHHHHHHHHhhcCCEEEEEechhHhhc------cCCccccCC
Confidence 67777877334778899999985 5632 26699999999999987764 2222111 112223333
Q ss_pred CccEEEEecCccc---ccccccceEEEEeeCCC-------------CcccchhHHHH-------HHhhhhcc-CCcchHH
Q 038416 209 IVPVITLGSISKR---WIVPGWRLGWLVTSDPN-------------GILQNSGFVDS-------IKGCLNAA-SHPVTFI 264 (387)
Q Consensus 209 ~~~~~~i~s~sK~---~~~~g~r~G~i~~~~~~-------------~~~~~~~~~~~-------~~~~~~~~-~~~~~~~ 264 (387)
| |++++.... ++.+|..+||..+.+.- +..+++.+.-. +|+.+.++ -+.+...
T Consensus 264 D---IvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaL 340 (450)
T COG0403 264 D---IVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQAL 340 (450)
T ss_pred c---eEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHH
Confidence 3 777776654 23456778887765411 11111211111 11111111 1111111
Q ss_pred HH-HHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 265 QA-AVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 265 ~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
.+ ++...+.-+..+.+.++.++..+...++.+.|++.. +++.+ ....-.-+.++++. .....++.+ ....
T Consensus 341 lA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~-~~~fFdt~~v~~~~------~~~~~l~~~-~~~~ 412 (450)
T COG0403 341 LALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV-FDHFFDTFTVRVPE------EVAEALLAA-AIAG 412 (450)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec-cccceeeEEEecch------hHHHHHHHH-HHhc
Confidence 11 111122224568899999999999999999999653 46633 22222223334431 012222232 3445
Q ss_pred CeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHH
Q 038416 343 SVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAF 379 (387)
Q Consensus 343 gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~ 379 (387)
|+.+..-. ...+-+++ .+++++++.+++.+...
T Consensus 413 G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 413 GINLRRVD----ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CCceeeec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 77665422 34566666 35789999999887654
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.40 E-value=0.00023 Score=71.64 Aligned_cols=269 Identities=13% Similarity=0.123 Sum_probs=143.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHhh---cCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVL---ARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l---~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
.+-.+.-+-.++|.+-++++.+. ..+..+|+++...|+.+...++ ....|++++. +++++.+
T Consensus 139 m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~ 205 (954)
T PRK12566 139 LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLA 205 (954)
T ss_pred chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcC
Confidence 33344445555555444433333 2224689999999988776555 0034444442 3334445
Q ss_pred ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEec---Ccccc
Q 038416 146 DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGS---ISKRW 222 (387)
Q Consensus 146 ~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s---~sK~~ 222 (387)
+.++.+|++.+|+. .|.+ ++++++++++++.|.++|+ .+.- +... ...+-..+..| |++++ |.=-+
T Consensus 206 ~~~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~--ll~~Pge~GAD---I~vG~~Q~fGvp~ 274 (954)
T PRK12566 206 AHAVFGALLQYPDT-HGEI---RDLRPLIDQLHGQQALACV-AADL-LSLL--VLTPPGELGAD---VVLGSTQRFGVPM 274 (954)
T ss_pred CCCEEEEEEECCCC-ceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHh--CCCChhhcCCc---EEeeCCCcCCCCC
Confidence 55788888999985 7887 5699999999999987653 2211 1111 11112233333 55653 22333
Q ss_pred cccccceEEEEeeCCC-------------CcccchhHH-------HHHHhhhhcc-CCcchHHHHHHHHH-hhhccHHHH
Q 038416 223 IVPGWRLGWLVTSDPN-------------GILQNSGFV-------DSIKGCLNAA-SHPVTFIQAAVPRI-VDETNEAFF 280 (387)
Q Consensus 223 ~~~g~r~G~i~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~-l~~~~~~~~ 280 (387)
+.+|.-.|++.+++.- +..+++.+. ..+++.+.++ -+.+....+.++.+ +.-+..+.+
T Consensus 275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl 354 (954)
T PRK12566 275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGL 354 (954)
T ss_pred CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHH
Confidence 4456667888775410 000001010 0111111111 11111112222221 122346778
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEE
Q 038416 281 AKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRI 360 (387)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri 360 (387)
+++.++...++.++.+.|.+. |++.... .+|--+.+... ....++... +.+.||-++--. .+.+.|
T Consensus 355 ~~ia~~~~~~a~~l~~~l~~~-g~~~~~~---~fF~~~~v~~~-----~~~~~~~~~-a~~~~~n~r~~~----~~~~~~ 420 (954)
T PRK12566 355 KRIAQRVHRLTAILAAGLEAK-GIKRLNR---HFFDTLTLEVG-----GAQAAIIES-AEAARINLRILG----RGRLGV 420 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCccccC---CccceEEEEcc-----CCHHHHHHH-HHHCCCeeEEeC----CCeEEE
Confidence 999999999999999999884 7774422 33322222210 023344444 455688776532 456788
Q ss_pred Ee--eCChHhHHHHHHHHH
Q 038416 361 AF--AAEPATLEDGLERIK 377 (387)
Q Consensus 361 ~~--~~~~e~~~~~~~~l~ 377 (387)
|+ .++.+++..++..+.
T Consensus 421 s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 421 SLDETCDEATVARLFDIFL 439 (954)
T ss_pred EeCCCCCHHHHHHHHHHhc
Confidence 88 467899999988883
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.93 E-value=0.0074 Score=52.27 Aligned_cols=305 Identities=10% Similarity=0.008 Sum_probs=161.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC---CeEEEcCCCCcc----hHHHhhccCCCce
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG---ANILIPRPGYPL----YEIHAAGSNNNLE 122 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g---~~vl~~~p~~~~----~~~~~~~~~~g~~ 122 (387)
.+.+..-..++..+ +...++|.++++-|.-+..++.++.+|- -+|+++.-.|++ +....+ .-|..
T Consensus 111 ~~De~il~l~~~iV------GA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~--lhG~~ 182 (465)
T KOG3846|consen 111 SIDEPILPLLAPIV------GAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCK--LHGIS 182 (465)
T ss_pred ecchhhhhhhhhhc------cCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhh--hcCCC
Confidence 34455556666666 4577899999999988998888887653 468877666653 455555 56655
Q ss_pred eeee--ccCC-CCCccCChhhHHHhhccCc---eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccC
Q 038416 123 ARHY--DLLP-EKRWEVDLDGVEALADENT---VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG 196 (387)
Q Consensus 123 ~~~~--~~~~-~~~~~~~~~~l~~~~~~~~---~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~ 196 (387)
+... -+.+ +....+..+++.+.++.+. .+|+++..+.-||+.++ +.+|-..-...|.++=.|-+|+.
T Consensus 183 ~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv---- 255 (465)
T KOG3846|consen 183 PENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV---- 255 (465)
T ss_pred hHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----
Confidence 4322 1222 2334556777888776653 33455566889999988 66666655667889989988884
Q ss_pred CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh----------h-----c---cC
Q 038416 197 STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL----------N-----A---AS 258 (387)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~----------~-----~---~~ 258 (387)
|.-+..+ ..++-.+.++.--|....+.-.+|-+..-....--..|.+..++.... . . -+
T Consensus 256 gNVpL~L---HdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiS 332 (465)
T KOG3846|consen 256 GNVPLQL---HDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRIS 332 (465)
T ss_pred cCCceEE---eecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccC
Confidence 2212222 222223555544465322112234443322111111123333332110 0 0 11
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-----------CCCCCCCC----CceEEEEEecCcc
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-----------CITCPVKP----QGAMFVMVKLNVS 323 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~----~~g~~~~~~~~~~ 323 (387)
+|+.....++..-|+-..+-.++..+++--....++...++... -+++. .| +.|.-+.+.|+.
T Consensus 333 NPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~Ii-TP~~~~erGcQLsl~Fss- 410 (465)
T KOG3846|consen 333 NPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTII-TPTSTDERGCQLSLYFSS- 410 (465)
T ss_pred CCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEe-CCcccccccceEEEEeCC-
Confidence 23333334444444432222233333222222222222222111 12211 22 235555555653
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhhh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+.....++| .++|+..-.- .++.+|+.+. .+-.|+-..++.|.+++..+..
T Consensus 411 ------p~~~vfqeL-~krGv~~DkR----~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 411 ------PTPKVFQEL-HKRGVIGDKR----RPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred ------CchHHHHHH-HHcCeecccc----CCCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence 233455555 7779875432 3688999983 4678999999999888877653
No 392
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.79 E-value=0.0032 Score=53.80 Aligned_cols=330 Identities=15% Similarity=0.095 Sum_probs=175.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEc
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH--------YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLT 79 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~ 79 (387)
+.++++.+|.. -+|+.|+..+++-+-+-. .++.+ .....+-+.....+++.++++-..+-+++.
T Consensus 6 ~~vvnFaaGPA------klp~~VL~e~qkdl~n~~g~GisV~EmSHRs--k~f~kii~~tes~lreLlniPdn~~vlf~Q 77 (370)
T KOG2790|consen 6 ERVVNFAAGPA------KLPESVLLEAQKDLLNFNGSGISVMEMSHRS--KDFAKIINDTESLLRELLNIPDNYKVLFLQ 77 (370)
T ss_pred cceeecCCCcc------cCCHHHHHHHHHHhhccCCCcceEEEecccc--hhHHHHHHHHHHHHHHHHcCCCceeEEEEe
Confidence 44556666532 456666666666554311 11222 233344444444555555555444455667
Q ss_pred CChHHHHHHHHHhhc--CCC---CeEEEcCCCCcchHHHhhccCCCce-eeeeccCCCC-CccCChhhHHHhhccCceEE
Q 038416 80 LGCSQAIEISLSVLA--RPG---ANILIPRPGYPLYEIHAAGSNNNLE-ARHYDLLPEK-RWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~--~~g---~~vl~~~p~~~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v 152 (387)
.|+|+-+.++...|+ +.| |-|++-...--.+.+.-+ +|.. .+..++.... +.-+|.+.++ .+++.+.|
T Consensus 78 GGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk---~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yv 152 (370)
T KOG2790|consen 78 GGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK---YGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYV 152 (370)
T ss_pred CCCcccccccchhhhccccCCccceEEeccccHHHHHHHHh---hCCceEEeccccccccCcCCChhhcc--cCCCccEE
Confidence 777887887777776 444 455554444444444444 4433 2333322111 1223444433 34556678
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
.+|.-..-.|+-++.-. +-..++..+|.|-+...+. .+..+..+ -++.....|.+|++|. -.+
T Consensus 153 yyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG~--Tvv 215 (370)
T KOG2790|consen 153 YYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAGV--TVV 215 (370)
T ss_pred EEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCcccc--EEE
Confidence 88876666677554211 1225578888887665422 12222222 2556678899898884 555
Q ss_pred EeeCCCCcccchhHHHHHHhh-------------hhccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHh
Q 038416 233 VTSDPNGILQNSGFVDSIKGC-------------LNAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l 298 (387)
+.++ +++...... .....+++.++.+++...++... ...+..+.+.-.+.++.+.+.+
T Consensus 216 ivr~--------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~i 287 (370)
T KOG2790|consen 216 IVRK--------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAI 287 (370)
T ss_pred EEeh--------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 5555 233222211 11223455556555554444322 3556666666777788888998
Q ss_pred hcCCCCC-CCCCCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHH
Q 038416 299 KEIPCIT-CPVKPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGL 373 (387)
Q Consensus 299 ~~~~~~~-~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~ 373 (387)
.+..|+. ++..|. +-+-+.+++.+.. -..+|+.+.+++ +..-.-|.. .-+.+|-|+ +.+-++.++++
T Consensus 288 D~s~gfy~cpVe~~~RS~MNV~Fri~~d~-----Le~eFLkeA~~~-~mv~LKGhR--SVGGiRASlYNAisv~~~q~L~ 359 (370)
T KOG2790|consen 288 DNSNGFYRCPVEPSVRSRMNVPFRIEKDE-----LEAEFLKEAAKE-HMVQLKGHR--SVGGIRASLYNAISVEEVQKLA 359 (370)
T ss_pred HhcCCeEEcccchhhhhhcccceeecchH-----HHHHHHHHHHHh-hhhcccccc--ccccchhhhhccccHHHHHHHH
Confidence 8754433 222332 2333344454321 134666665444 444333321 246799999 56889999988
Q ss_pred HHHHHHHHHh
Q 038416 374 ERIKAFCQRH 383 (387)
Q Consensus 374 ~~l~~~~~~~ 383 (387)
+-+++..+.+
T Consensus 360 ~~m~~F~k~h 369 (370)
T KOG2790|consen 360 AFMKEFQKKH 369 (370)
T ss_pred HHHHHHHHhc
Confidence 8888877654
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.39 E-value=0.0013 Score=55.56 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=84.5
Q ss_pred HHHHHHhhc--CCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC-CccCChhhHHHhhcc-CceEEEEeCCCCC
Q 038416 86 IEISLSVLA--RPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK-RWEVDLDGVEALADE-NTVAIVIINPGNP 160 (387)
Q Consensus 86 ~~~~~~~l~--~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~np 160 (387)
+...+.++. +|. .-|+...-.--+...... ..|.+++.+.-..+. ....|++.+++.+.. +...++..+....
T Consensus 89 lslc~~s~r~krpkakyiiw~ridqks~~ksi~--~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~stts 166 (432)
T KOG3843|consen 89 LSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSII--HAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTS 166 (432)
T ss_pred HHHHHHHHhhcCCcccEEEEEecchHHHHHHHH--hcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeeccc
Confidence 444444553 344 344444433334444445 688887776543332 233478888877754 3444433333332
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc-cCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV-FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
.=..-+++.+++|+.+|..|+++-|+..+|+.-.-. -..-+.. -....-..++.|+-|.|..|- .|.+++.=
T Consensus 167 cfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~f--- 239 (432)
T KOG3843|consen 167 CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAF--- 239 (432)
T ss_pred ccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHh---
Confidence 333345688999999999999999999999842110 0000000 001011245678999987652 23344321
Q ss_pred cccchhHHHHHHhhh
Q 038416 240 ILQNSGFVDSIKGCL 254 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~ 254 (387)
+..++..+.+.+
T Consensus 240 ---k~n~iq~iak~y 251 (432)
T KOG3843|consen 240 ---KDNFIQEIAKMY 251 (432)
T ss_pred ---HHHHHHHHHHhC
Confidence 124666665554
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.25 E-value=0.21 Score=48.13 Aligned_cols=310 Identities=14% Similarity=0.064 Sum_probs=162.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC-hHHHH---HHHHHhh-cCCCC---e-EEEcCCCCcchHHHhhccCCC
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLG-CSQAI---EISLSVL-ARPGA---N-ILIPRPGYPLYEIHAAGSNNN 120 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~a~---~~~~~~l-~~~g~---~-vl~~~p~~~~~~~~~~~~~~g 120 (387)
+|+.++-..+.+++-.. +.-|.+-+.++ +.++- ..++++. ..+|+ + -++|...|......+. ..|
T Consensus 578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~--Mag 651 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAA--MAG 651 (1001)
T ss_pred hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHH--hcC
Confidence 57777777777776442 23466666533 22222 2233333 33442 3 3567778876667777 899
Q ss_pred ceeeeeccCCCCCccCChhhHHHhhccC---ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC
Q 038416 121 LEARHYDLLPEKRWEVDLDGVEALADEN---TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197 (387)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~ 197 (387)
++++.+..+ .+..+|..+|.+..+++ -.++.++-|+. -|+. .+.++++.++.++||-.|..|.+-.....+-
T Consensus 652 mkvvpV~~~--~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 652 MKVVPVGCD--ANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGL 726 (1001)
T ss_pred CEEEEeecc--CCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCccceecc
Confidence 999988875 34478999999877654 34567777764 4555 2459999999999999999998766432221
Q ss_pred CCCccccccCCCccEEEEecCccccc----ccccceEEEEeeCCC-CcccchhHHHHHH--hhh------h--ccCCcch
Q 038416 198 TPYVPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPN-GILQNSGFVDSIK--GCL------N--AASHPVT 262 (387)
Q Consensus 198 ~~~~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~-~~~~~~~~~~~~~--~~~------~--~~~~~~~ 262 (387)
..+. .+..+ +.=--++|.|. .+|..+|-|.+.+.- .....-.++.-.+ ... . +++..--
T Consensus 727 c~pG---d~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL 800 (1001)
T KOG2040|consen 727 CRPG---DIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALIL 800 (1001)
T ss_pred cCCc---ccccc---ceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceee
Confidence 1111 12222 22223455552 233334554432100 0000000111000 000 0 0000111
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 263 FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG--AMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
+..++...++.. ..+.+.-+...-+++++.++|+..=.+-+. .+.+ +.-+.+++...+.....+..+++.+| .
T Consensus 801 pISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~hYkil~~-~~~~~vaHEFIlD~r~fK~~agieavDvAKRL-~ 875 (1001)
T KOG2040|consen 801 PISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESHYKILFR-GENGLVAHEFILDLRPFKKTAGIEAVDVAKRL-M 875 (1001)
T ss_pred hhHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhccceeEe-cCCcceeeeeeeechhhccccCCcHHHHHHHH-H
Confidence 123333334432 456666666777889999999873112211 1211 11223344332221112455666655 7
Q ss_pred hcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 341 EESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 341 ~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
++|... |-..+...+++-|-+. -+++++++..+++-.+-++
T Consensus 876 DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 876 DYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred hccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 888765 3344455678888873 3567888877766544443
No 395
>PLN02672 methionine S-methyltransferase
Probab=95.79 E-value=0.45 Score=49.84 Aligned_cols=193 Identities=13% Similarity=0.079 Sum_probs=115.6
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC---CCeEEEcCCCC
Q 038416 31 EDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP---GANILIPRPGY 107 (387)
Q Consensus 31 ~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~---g~~vl~~~p~~ 107 (387)
+..+...+.+..+.-|.++.|...+|+.||.|++..++++..+++|++.++-..|++.+++.+.-. -|.- +...-.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 485 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEH-LTRWLP 485 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhh-hhccCC
Confidence 445566666666677888899999999999999999999999999999999999999999886311 0111 111112
Q ss_pred cchHHHhhccCCC--------ceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 108 PLYEIHAAGSNNN--------LEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 108 ~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
..|...+. ..| -.+..+..+.. .+.+.+.++. ++.+|+..-... -..+....+.|.+.++
T Consensus 486 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 554 (1082)
T PLN02672 486 KKWLTSLA--IENATSDSKSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNVTA 554 (1082)
T ss_pred HHHHhHhh--hhcccccCccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHHHH
Confidence 22333332 222 11222211111 1233333333 344454333332 2234466899999999
Q ss_pred hcCcEEeecccccc-cccCCCCCcccccc---CCCccEEEEecCcccccccccceEEEEee
Q 038416 179 NLGIIVIADEVYNH-LAFGSTPYVPMGVF---GSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 179 ~~~~~li~D~~~~~-~~~~~~~~~~~~~~---~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
+.|..++.|.+-.. +.-......-+..+ ....+..++..+-|.-..+.+-+.+++.-
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1082)
T PLN02672 555 EIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISE 615 (1082)
T ss_pred hhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecC
Confidence 99999999976542 11000011112111 11234566777888877899999999864
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.80 E-value=4.4 Score=39.59 Aligned_cols=265 Identities=14% Similarity=0.153 Sum_probs=125.7
Q ss_pred CCEEEcCChHHHHHHHHHhh-cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 74 EDVYLTLGCSQAIEISLSVL-ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
.+.-+-.-+|.|-+++..+. ..++.+.++...+|+.....++-...+..+. +.+ .|+++... -.++...+
T Consensus 181 aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~-------~~~~~~~~-s~~~v~gv 251 (1001)
T KOG2040|consen 181 ANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVV-------SDIKEADY-SSKDVSGV 251 (1001)
T ss_pred cchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccccccee-EEe-------cCHHHhhc-cccceeEE
Confidence 34444444444444444443 2455679999999998776666112222222 111 12332221 12345566
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec-ccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD-EVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
++.-|.. -|.+.+ ..++++.+++.+.++++- |--+. . -..+-..+.. .|.++|-..+ |+| +||
T Consensus 252 lvQYP~t-~G~i~d---~~el~~~a~~~~s~vv~atDLLaL-t----iLrpPgefGa---DIavGSsQRF-GVP---lGY 315 (1001)
T KOG2040|consen 252 LVQYPDT-EGSVLD---FDELVELAHANGSLVVMATDLLAL-T----ILRPPGEFGA---DIAVGSSQRF-GVP---LGY 315 (1001)
T ss_pred EEEcCCC-CCcccC---HHHHHHHhhccCceEEEeehhhHH-H----ccCChhhcCc---eeeecccccc-Ccc---ccC
Confidence 6667754 566655 667777777888766542 22111 1 0111122322 3667766554 332 333
Q ss_pred E-------EeeC-------------CCCcccchhHHHHHHhhh---hcc-CCcchHHHHHHHHHhhh-----ccHHHHHH
Q 038416 232 L-------VTSD-------------PNGILQNSGFVDSIKGCL---NAA-SHPVTFIQAAVPRIVDE-----TNEAFFAK 282 (387)
Q Consensus 232 i-------~~~~-------------~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~l~~-----~~~~~~~~ 282 (387)
- .+++ ..+..+++.+.-.+.... ... .+.+.-...|+.+.+.. +....+.+
T Consensus 316 GGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~ 395 (1001)
T KOG2040|consen 316 GGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKE 395 (1001)
T ss_pred CCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHH
Confidence 1 1100 001112222221111000 000 11121111121111111 23466888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe
Q 038416 283 IIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF 362 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~ 362 (387)
+.+++......+...|++. +-++++.+ +|=.+++... .+.+++....+ +++|-+.-- .++.+-+++
T Consensus 396 IArrvh~~T~~l~~~l~~a-ghel~~k~---fFDTLkI~~~-----~s~~~~l~rA~-~~~iNlr~~----ed~tigvsl 461 (1001)
T KOG2040|consen 396 IARRVHNLTLILAEGLKNA-GHELQHKP---FFDTLKIRCG-----CSAEEVLDRAA-KRQINLRLV----EDGTIGVSL 461 (1001)
T ss_pred HHHHHHHHHHHHHHHHhhc-chhhcccc---ccceEEEEec-----CcHHHHHHHHH-hhcCceEEe----ecCceEEee
Confidence 8888888888888888876 44533222 3333333221 03455555554 445655432 146677777
Q ss_pred --eCChHhHHHHHHHHH
Q 038416 363 --AAEPATLEDGLERIK 377 (387)
Q Consensus 363 --~~~~e~~~~~~~~l~ 377 (387)
..+++|++.++..+.
T Consensus 462 DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 462 DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cccccHHHHHHHHHHHc
Confidence 457889999988775
No 397
>PRK10595 SOS cell division inhibitor; Provisional
Probab=89.52 E-value=5.3 Score=32.01 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=57.7
Q ss_pred hcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCC-CCCccccCCHHHHH
Q 038416 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINP-GNPCGNVFSYQHLQ 171 (387)
Q Consensus 93 l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p-~nptG~~~~~~~~~ 171 (387)
+...+.-|+...|-+..+...+. ..|+....+-.....+..-.+...|++++.+...+++... .. ++.++++
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~--~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~-----l~~~~~R 124 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQ--ASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDE-----LTEEEHA 124 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHH--HcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCccc-----CCHHHHH
Confidence 34556678778888888888998 8998765543321111122456778888888877777774 23 5668899
Q ss_pred HHHHHHHhcCcEE
Q 038416 172 KIARTARNLGIIV 184 (387)
Q Consensus 172 ~l~~~~~~~~~~l 184 (387)
+|--.|++.+.+.
T Consensus 125 RLQlAAe~g~~l~ 137 (164)
T PRK10595 125 RLVDAAQEGNAMG 137 (164)
T ss_pred HHHHHHHhCCCEE
Confidence 9988888776543
No 398
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=88.30 E-value=6.5 Score=31.53 Aligned_cols=84 Identities=11% Similarity=0.028 Sum_probs=57.4
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeC-CCCCccccCCHHHHHH
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIIN-PGNPCGNVFSYQHLQK 172 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~-p~nptG~~~~~~~~~~ 172 (387)
...+.-++...|-+..+...+. ..|++...+-+.......-.+...|++++.++..++++. |+. ++.+++++
T Consensus 57 s~~~Rwlv~IaPP~~~~~~~L~--~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR 129 (168)
T TIGR00623 57 GQQSRWQLWLTPQQKLSKEWVQ--SSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK 129 (168)
T ss_pred cccCceEEEECCCCccCHHHHH--HcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence 3456677777787778888888 899876555322111112246788889988888777887 533 66688888
Q ss_pred HHHHHHhcCcEE
Q 038416 173 IARTARNLGIIV 184 (387)
Q Consensus 173 l~~~~~~~~~~l 184 (387)
|--.++.-+.+.
T Consensus 130 LqlAA~~G~al~ 141 (168)
T TIGR00623 130 LVRAAEEGNAMG 141 (168)
T ss_pred HHHHHHhCCCeE
Confidence 888887766543
No 399
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=83.27 E-value=13 Score=33.26 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=39.0
Q ss_pred CccCChhhHHHhhc---c---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 133 RWEVDLDGVEALAD---E---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 133 ~~~~~~~~l~~~~~---~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
+..++.+++++.++ . ...+| +.+.+=|.| ++.+...+|++.|++.|+.+++|.....+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~V-vlsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIV-VLSGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEE-EEeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 44556666555432 1 22333 344444666 66788999999999999999999887654
No 400
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=77.03 E-value=11 Score=34.05 Aligned_cols=105 Identities=16% Similarity=0.209 Sum_probs=68.5
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEc-CCCCcc-----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEE
Q 038416 81 GCSQAIEISLSVLARPGANILIP-RPGYPL-----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVI 154 (387)
Q Consensus 81 g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 154 (387)
|=|+.+.-+.+-+.+.|.+|++. .-+|.. ...+.+ +.|.+++.-+ ...+.-.+-.++++.+...+..+|++
T Consensus 151 GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~e--r~gv~vI~~~-~G~DpAaVafDAi~~Akar~~Dvvli 227 (340)
T COG0552 151 GKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGE--RLGVPVISGK-EGADPAAVAFDAIQAAKARGIDVVLI 227 (340)
T ss_pred chHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHH--HhCCeEEccC-CCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 34778888888888889777764 444432 344555 6677766532 11111112234566666678888877
Q ss_pred eCC---CCCccccCCHHHHHHHHHHHHhcC------cEEeeccccc
Q 038416 155 INP---GNPCGNVFSYQHLQKIARTARNLG------IIVIADEVYN 191 (387)
Q Consensus 155 ~~p---~nptG~~~~~~~~~~l~~~~~~~~------~~li~D~~~~ 191 (387)
-.. ||-+... +++++|.+++++.. ++++.|..-+
T Consensus 228 DTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 228 DTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred eCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 765 7777666 88999999999765 6777787765
No 401
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=74.25 E-value=35 Score=28.79 Aligned_cols=98 Identities=19% Similarity=0.275 Sum_probs=62.3
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeE--------------EEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhh
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANI--------------LIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~v--------------l~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 140 (387)
-+++-+||-..+.++..++. .|..| -...|...-....++ ..|+++.......+ .....++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae--~~gi~l~~~~~~g~--~e~eve~ 77 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAE--AMGIPLVTFDTSGE--EEREVEE 77 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHH--hcCCceEEEecCcc--chhhHHH
Confidence 35677888888777777763 34222 111222222345556 67888777765331 2335677
Q ss_pred HHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 141 VEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 141 l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
|.++++. +...|+ +|.+.+..+..++-.+|++.|+.+
T Consensus 78 L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 78 LKEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 7777653 334554 799999999999999999998753
No 402
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=73.00 E-value=24 Score=30.01 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=50.2
Q ss_pred hHHHHHHHHHhhcCCCCeEE-EcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 82 CSQAIEISLSVLARPGANIL-IPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~~vl-~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
|..+ ..++.+|.+++-.|. +..+.-......++ ..|.+++..++ -|.+.|.++++ +...|+++.+...
T Consensus 8 G~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~--~~g~~vv~~d~-------~~~~~l~~al~-g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 8 GNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQ--ALGAEVVEADY-------DDPESLVAALK-GVDAVFSVTPPSH 76 (233)
T ss_dssp SHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHH--HTTTEEEES-T-------T-HHHHHHHHT-TCSEEEEESSCSC
T ss_pred cHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhh--cccceEeeccc-------CCHHHHHHHHc-CCceEEeecCcch
Confidence 4444 344444544664443 34444222334445 67887765443 27899999887 5555555555332
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
....+....+++.|++.|+..++
T Consensus 77 ---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 77 ---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp ---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred ---hhhhhhhhhHHHhhhccccceEE
Confidence 12235678899999998875553
No 403
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=72.69 E-value=16 Score=32.62 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=35.5
Q ss_pred ChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 137 DLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-++.++++.+.+.+.+++..... +.++-++|.++++++|+.++==.+.+
T Consensus 78 v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 46777777777888877666543 24545689999999999888655554
No 404
>PRK04296 thymidine kinase; Provisional
Probab=72.51 E-value=29 Score=28.66 Aligned_cols=95 Identities=14% Similarity=0.187 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCc---chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYP---LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIIN 156 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~ 156 (387)
+.++..+.+. ...|.+|++..|.+. .....+. ..|.++..+.. ...+++.+.+. .+..+|++-.
T Consensus 17 T~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~--~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDE 86 (190)
T PRK04296 17 TELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVS--RIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDE 86 (190)
T ss_pred HHHHHHHHHH-HHcCCeEEEEeccccccccCCcEec--CCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEc
Confidence 4444444444 456788887766432 2233444 55544332211 12333333332 2566777777
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
.+ .++.+++.++.+.+++.|+.+|+=.-...
T Consensus 87 aq-----~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 87 AQ-----FLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred cc-----cCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 64 46777788999998889998887655554
No 405
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=72.46 E-value=41 Score=30.86 Aligned_cols=109 Identities=11% Similarity=0.058 Sum_probs=58.9
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeE--EEcCCCCc------chHHHhhccCCCceeeeeccCCCCCccCChhhHHHh
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANI--LIPRPGYP------LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEAL 144 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~v--l~~~p~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 144 (387)
.|.++..|||-....++..+...-|.++ +..++.+. .....+. ..|.+...+.. +++.+.+.
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~--~lgvd~~~i~~--------d~~~~~~l 129 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIK--KLGFDLHTITI--------NPETFRKL 129 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHH--HcCCCeEEEeC--------CHHHHHHH
Confidence 5667778888766666533322234443 34566664 2344445 57777766543 34444333
Q ss_pred hccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC
Q 038416 145 ADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197 (387)
Q Consensus 145 ~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~ 197 (387)
...... +..+|..... ......+.++|+++|+.+|+..-...-.++|
T Consensus 130 ~~~~~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 130 QRAYFK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHHHHh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 221111 2222322221 1235677889999999999887776544443
No 406
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=71.13 E-value=64 Score=28.65 Aligned_cols=108 Identities=20% Similarity=0.231 Sum_probs=62.2
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCC--eEEEc--CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGA--NILIP--RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN 148 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 148 (387)
..+|++|.|.+..+...+....++|. +|++. .|.+.+..........|++...++ | .++-+.+.+-
T Consensus 162 snEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~MsrV 231 (353)
T KOG1465|consen 162 SNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSRV 231 (353)
T ss_pred cCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhhc
Confidence 46899999988888877777766653 45554 344444222222223555544442 2 3444445544
Q ss_pred ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccc
Q 038416 149 TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 149 ~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~ 190 (387)
.|+|+-.+.--+-|-+..+.-...++..|+.|-+++++=.-.
T Consensus 232 nKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~ 273 (353)
T KOG1465|consen 232 NKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPM 273 (353)
T ss_pred ceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecch
Confidence 555555554333333444455677888888998888765443
No 407
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=67.74 E-value=72 Score=28.49 Aligned_cols=103 Identities=18% Similarity=0.135 Sum_probs=57.8
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCC--eEEE--cCCCCcchH--HHhhccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGA--NILI--PRPGYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~--~~p~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
...++++|.+-+.+...++....+.|. +|++ ..|.+.+.. ..++ ..|.++..+. |.. .-..+
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~--~~gI~~~~I~---------Dsa-~~~~~ 185 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELR--QSGIPVTVIV---------DSA-VGAFM 185 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHH--HcCCceEEEe---------chH-HHHHH
Confidence 456899998887777777777777775 5555 367776543 3344 6787776653 111 11122
Q ss_pred ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 146 DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 146 ~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.-.++++=...--.-|.+.+.----.|+..|++.++++++
T Consensus 186 ~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 186 SRVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HhCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 22222222112211223444433345677788888887754
No 408
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=65.88 E-value=32 Score=30.57 Aligned_cols=141 Identities=19% Similarity=0.144 Sum_probs=71.7
Q ss_pred CCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
+..+-+++|.||...=..+..-+.+.|.++++-+-.-.+..+..+ ....| +++.+.++-.+. -++.++.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 345667788777776666776778888766554333333333332 00335 666666554322 133444444433
Q ss_pred CceEEEEeCCC---CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc
Q 038416 148 NTVAIVIINPG---NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV 224 (387)
Q Consensus 148 ~~~~v~l~~p~---nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~ 224 (387)
+..-|+++|.. .-..--.+++++++..++-- . +.|.. -..+.|-..-..++.++.|.|..-.++.
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~----~-------~~f~t-~kaFLP~M~~~~~GHIV~IaS~aG~~g~ 180 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT----I-------AHFWT-TKAFLPKMLENNNGHIVTIASVAGLFGP 180 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHHhh----H-------HHHHH-HHHHhHHHHhcCCceEEEehhhhcccCC
Confidence 34456667663 22333467788888776422 1 11111 1112221111234567777777666666
Q ss_pred cc
Q 038416 225 PG 226 (387)
Q Consensus 225 ~g 226 (387)
+|
T Consensus 181 ~g 182 (300)
T KOG1201|consen 181 AG 182 (300)
T ss_pred cc
Confidence 65
No 409
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=65.63 E-value=12 Score=34.18 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=41.7
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..++++..+.+.+..+|.+..+...++-..... .....+.|-.++.+++++|++.|+++||-||-
T Consensus 29 ~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 29 LYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 677777777776555565544443332211110 11223456679999999999999999998874
No 410
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=65.52 E-value=47 Score=27.55 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=66.2
Q ss_pred CChHHHHHHHHHhhcCCCCeEEEcCCCCcch---HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----CceE
Q 038416 80 LGCSQAIEISLSVLARPGANILIPRPGYPLY---EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NTVA 151 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~ 151 (387)
+|=|+-+-..++.+...|.+|++..|....- ..... +.|......... +..++-+.+.. .+.+
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~S--r~G~~~~A~~i~-------~~~~i~~~i~~~~~~~~~~~ 85 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSS--RIGLSSEAVVIP-------SDTDIFDEIAALHEKPPVDC 85 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeee--ccCCcccceecC-------ChHHHHHHHHhcccCCCcCE
Confidence 4546656666666667788999988877542 22222 566555444432 12223332221 2567
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
|++-..+. ++.+.+..+.+++.+.|++||+=.--.+|. +.++.+
T Consensus 86 v~IDEaQF-----~~~~~v~~l~~lad~lgi~Vi~~GL~~DFr--gepFe~ 129 (201)
T COG1435 86 VLIDEAQF-----FDEELVYVLNELADRLGIPVICYGLDTDFR--GEPFEG 129 (201)
T ss_pred EEEehhHh-----CCHHHHHHHHHHHhhcCCEEEEeccccccc--cCCCcc
Confidence 77777775 777889999999999999999866655533 544443
No 411
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=65.35 E-value=26 Score=31.13 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=35.5
Q ss_pred ChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 137 DLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
-++.++++.+.+.+.+++..... +..+.++|.++|+++|+.++==.+.+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~girilGPNc~Gi 125 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRLIGPNCPGI 125 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCceE
Confidence 35677777777888877766543 333458899999999998875555543
No 412
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=64.81 E-value=12 Score=33.59 Aligned_cols=64 Identities=27% Similarity=0.524 Sum_probs=41.1
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..++++..+.+.+..+|.+..+..-++.+.... .++ .+.|-.++.+++++|++.|+++|+-||-
T Consensus 27 ~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 27 RYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 677777777776555565554443333221111 112 2345589999999999999999998774
No 413
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=61.70 E-value=67 Score=30.53 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=79.1
Q ss_pred CCCcHHHHHHHHHHHhhcCCC-----------CCCCCCEEEcCChHHHHHHHHHhhcCCCC--eEEE--cCCCCcchH--
Q 038416 49 TLGVPSARRGIADYLNRDLPY-----------KLSPEDVYLTLGCSQAIEISLSVLARPGA--NILI--PRPGYPLYE-- 111 (387)
Q Consensus 49 ~~~~~~lr~~ia~~~~~~~~~-----------~~~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~--~~p~~~~~~-- 111 (387)
....++|.+.|-+|+...... .+...++++|-|.+..++.++.-..+.|. +|++ ..|.+.+-.
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~l 403 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLL 403 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHH
Confidence 345567777777777654431 23456888888887777777766544442 4444 466666532
Q ss_pred HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 112 IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 112 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
..+. ..|+++.|+-.+. ++. ...+-+++++-++.--.-|.+|+..--..++-+++.+|++||+=
T Consensus 404 r~Lv--~~GinctYv~I~a-----~sy-----im~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 404 RRLV--DRGINCTYVLINA-----ASY-----IMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred HHHH--HcCCCeEEEEehh-----HHH-----HHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 2333 5788888775421 111 11224666655565444588888887888888999999988754
No 414
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=61.04 E-value=11 Score=37.39 Aligned_cols=33 Identities=27% Similarity=0.321 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCC
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGST 198 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~ 198 (387)
++++++++++.|++.||-||+|=+++.|.-++.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 569999999999999999999999998776554
No 415
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=60.62 E-value=92 Score=28.13 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=52.8
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCC--CeEEEc--CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPG--ANILIP--RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g--~~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
...++++|.|-+.....++....+.| -+|++. .|...+....-.....|+++..++- ..+-..+.
T Consensus 119 ~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D----------sav~~~m~- 187 (310)
T PRK08535 119 RDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD----------SAVRYFMK- 187 (310)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh----------hHHHHHHH-
Confidence 34567777775555555555554444 355554 4444442211112257877776641 11122222
Q ss_pred CceEEEEe-CCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 148 NTVAIVII-NPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 148 ~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
+...|++- ..-...|.+.+.---..++-.|+.+++++++=
T Consensus 188 ~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 188 DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 23333332 22223444444444566777888999887753
No 416
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=60.61 E-value=1.2e+02 Score=26.55 Aligned_cols=100 Identities=17% Similarity=0.077 Sum_probs=54.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEc--CCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCce
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIP--RPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV 150 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~--~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 150 (387)
+++++|-|.+..+...+.. .+++.+|++. .|.+.+. ..+. ....|+++..++ | ..+-..+. +..
T Consensus 87 ~dvILT~s~S~~v~~~l~~-~~~~~~V~v~ESrP~~eG~-~~a~~L~~~GI~vtli~---------D-sa~~~~m~-~vd 153 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISS-SEKIKSVYILESRPMLEGI-DMAKLLVKSGIDVVLLT---------D-ASMCEAVL-NVD 153 (253)
T ss_pred CCEEEEeCCcHHHHHHHHh-cCCCCEEEEecCCCchHHH-HHHHHHHHCCCCEEEEe---------h-hHHHHHHH-hCC
Confidence 4788888877777766644 2344567665 4555543 2222 225677776553 1 11122222 333
Q ss_pred EEEEe-CCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 151 AIVII-NPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 151 ~v~l~-~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.|++- ..-...|.+++.---..++-.|+.+++++++
T Consensus 154 ~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 154 AVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred EEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 33332 2222344455444456677788999999887
No 417
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=60.46 E-value=1.1e+02 Score=26.97 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCC--eEEEc--CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGA--NILIP--RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
...++++|.+-+.....+++...+.|. +|++. .|.+.+....-.+...|+++..+. ++ ....+.+
T Consensus 108 ~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~---Ds----a~~~~m~---- 176 (275)
T PRK08335 108 DDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVIT---DA----QLGLFAK---- 176 (275)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEe---cc----HHHHHHH----
Confidence 345677776644444444444444443 56654 466655433222225677777653 11 1222222
Q ss_pred CceEEEEe-CCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 148 NTVAIVII-NPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 148 ~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+...|++- ..-...|.+...----.++-.|+.|++++++
T Consensus 177 ~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 177 EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 23233221 1111122222222234566678899998876
No 418
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=60.09 E-value=97 Score=27.84 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=50.7
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCC--eEEEc--CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGA--NILIP--RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN 148 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 148 (387)
..++++|.|-+.....+++...+.|. +|++. .|.+.+....-.....|+++..++- ..+-..+. +
T Consensus 115 ~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~D----------sa~~~~m~-~ 183 (301)
T TIGR00511 115 DGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVD----------SAVRYFMK-E 183 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEeh----------hHHHHHHH-h
Confidence 45677776655444445555444443 45553 4555442212123367777776641 11122222 2
Q ss_pred ceEEEE-eCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 149 TVAIVI-INPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 149 ~~~v~l-~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
...|++ ...-...|.+++.---..++-.|+.+++++++=
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 333322 122223344444444556777888899887653
No 419
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=59.85 E-value=15 Score=33.08 Aligned_cols=58 Identities=17% Similarity=0.366 Sum_probs=37.4
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..++++..+.+.+..+|.+.....-++.... ..|-.++.+++++|++.|+++||-||-
T Consensus 29 ~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 29 SVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 6777777776655555554433322211101 135579999999999999999998773
No 420
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=59.41 E-value=49 Score=27.93 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=38.3
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
++.++++++...+++-+-.-+..+-.. .+..+++.++|++|++.+|+++-..
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 788889998777777665555433332 4667899999999999998886554
No 421
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=58.31 E-value=14 Score=33.94 Aligned_cols=60 Identities=20% Similarity=0.342 Sum_probs=40.3
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..++++..+.+.+..+|.+......++..... ...|-.++.+++++|++.|+++||-||-
T Consensus 29 ~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga---------~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 29 YNKLNVLHWHITDSQSFPLESPSYPELSKKGA---------YSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HhCCcEEEEeEEcCCCceEeeCCCchhhhccC---------cCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 67777777777655566565444443222111 1235678999999999999999998874
No 422
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=56.97 E-value=1.5e+02 Score=26.77 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=36.3
Q ss_pred cCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 135 EVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 135 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
.+|...+.+.+.....+-++..+..+ +..++.+.++++.+..++.--++|+|..-.
T Consensus 160 ~~~~~~l~~~~~~~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p~~ 215 (322)
T TIGR03815 160 RLPAGALRDALPRRGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLPRR 215 (322)
T ss_pred CcCHHHHHHhCCCcCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCCCC
Confidence 35666676666443344456655443 344677788888888776656889998754
No 423
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=56.87 E-value=54 Score=28.88 Aligned_cols=83 Identities=19% Similarity=0.254 Sum_probs=58.5
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
|...+.-.|-|....+..+ ..+.+...+.+++. .-.+++.++++...+.+++..-+ .|..+..++.+.
T Consensus 44 gG~~~~g~PVf~tV~EA~~--~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEg------IP~~D~~~~~~~ 111 (293)
T COG0074 44 GGQTILGLPVFNTVEEAVK--ETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEG------IPVLDMLELKRY 111 (293)
T ss_pred CceEEcCccHHHHHHHHHH--hhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCC------CCHHHHHHHHHH
Confidence 3455666888888888888 77777555544332 35677888888777776655544 566889999999
Q ss_pred HHhcCcEEeeccccc
Q 038416 177 ARNLGIIVIADEVYN 191 (387)
Q Consensus 177 ~~~~~~~li~D~~~~ 191 (387)
+++.++.+|==++-.
T Consensus 112 a~~~g~~iiGPncpG 126 (293)
T COG0074 112 AREKGTRLIGPNCPG 126 (293)
T ss_pred HHhcCCEEECCCCCc
Confidence 999998877555544
No 424
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=56.69 E-value=29 Score=31.41 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=50.7
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
.-.|.+|.+.+. ....++++++...... .+-..-++. +.|-|++.-|- .++.++.++|.+.|++.| .
T Consensus 58 ~k~y~syEeLak--d~~vDvVyi~~~~~qH----~evv~l~l~-~~K~VL~EKPl-----a~n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 58 PKAYGSYEELAK--DPEVDVVYISTPNPQH----YEVVMLALN-KGKHVLCEKPL-----AMNVAEAEEIVEAAEARG-V 124 (351)
T ss_pred CccccCHHHHhc--CCCcCEEEeCCCCccH----HHHHHHHHH-cCCcEEecccc-----cCCHHHHHHHHHHHHHcC-c
Confidence 447889999999 8888999987643222 222222332 34446555553 367799999999999988 5
Q ss_pred Eeecccccc
Q 038416 184 VIADEVYNH 192 (387)
Q Consensus 184 li~D~~~~~ 192 (387)
++.|..+.-
T Consensus 125 ~~meg~~~R 133 (351)
T KOG2741|consen 125 FFMEGLWWR 133 (351)
T ss_pred EEEeeeeee
Confidence 666666553
No 425
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=56.50 E-value=1.5e+02 Score=26.68 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=50.6
Q ss_pred CCCEEEcCChH--------HHHHHHHHhhcCCC--CeEEEc--CCCCcch---HHHhhccCCCceeeeeccCCCCCccCC
Q 038416 73 PEDVYLTLGCS--------QAIEISLSVLARPG--ANILIP--RPGYPLY---EIHAAGSNNNLEARHYDLLPEKRWEVD 137 (387)
Q Consensus 73 ~~~i~~~~g~~--------~a~~~~~~~l~~~g--~~vl~~--~p~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~ 137 (387)
..++++|.|-+ .....+++...+.| -+|++. .|...+. ...+. ..|+++..++-
T Consensus 118 ~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~--~~gI~vtlI~D--------- 186 (303)
T TIGR00524 118 DGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELM--QDGIDVTLITD--------- 186 (303)
T ss_pred CCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHH--HCCCCEEEECh---------
Confidence 45677776644 22223333433344 355554 5666652 23333 57777776531
Q ss_pred hhhHHHhhcc-CceEEEEe-CCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 138 LDGVEALADE-NTVAIVII-NPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 138 ~~~l~~~~~~-~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
..+-..+.. +...|++- ..-...|-+.+.----.++-.|+.+++++++=
T Consensus 187 -sa~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 187 -SMAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred -hHHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 112222221 33333332 22223344444444556777788899888754
No 426
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=54.50 E-value=49 Score=21.96 Aligned_cols=61 Identities=10% Similarity=0.170 Sum_probs=36.5
Q ss_pred chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC-HHHHHHHHHHHHhcCcEEeec
Q 038416 109 LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS-YQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 109 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~-~~~~~~l~~~~~~~~~~li~D 187 (387)
.+...++ ..|.++..+.. ..+.+. .....+++.+|... ++ ++++++|.++.++-|-++|+|
T Consensus 9 a~~~~L~--~~g~~v~~~~~--------~~~~l~----~~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLE--EQGVKVERWRK--------PYEALE----ADDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHH--HCCCeeEEecc--------cHHHhC----CCCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 3455566 66777765432 233332 23334556666521 44 488999999999877777765
No 427
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=53.93 E-value=71 Score=28.43 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=61.9
Q ss_pred CcHHHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 26 DSTVAEDAVVDALRTAHYNC------YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
.-..+.+.+++.+....... |....+..+.-..+++.+. ...-+++++.|+..+..+. ..+... --
T Consensus 12 ~~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~------~~~~DlIi~~gt~aa~~~~-~~~~~~-iP 83 (294)
T PF04392_consen 12 ALDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLK------AQKPDLIIAIGTPAAQALA-KHLKDD-IP 83 (294)
T ss_dssp HHHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHC------CTS-SEEEEESHHHHHHHH-HH-SS--S-
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHh------cCCCCEEEEeCcHHHHHHH-HhcCCC-cE
Confidence 34556667777766532222 2223444444455555552 2345788888877655543 343321 23
Q ss_pred EEE---cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHH---hhccC-ceEEEEeCCCCCccccCCHHHHHH
Q 038416 100 ILI---PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA---LADEN-TVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 100 vl~---~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~---~~~~~-~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
|++ .+|...+...... ..|..+.-+-- ..+.+.-.+ .+-|+ .++.++.+++.+.+ ....+.
T Consensus 84 VVf~~V~dp~~~~l~~~~~--~~~~nvTGv~~------~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~ 151 (294)
T PF04392_consen 84 VVFCGVSDPVGAGLVDSLD--RPGKNVTGVSE------RPPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQ 151 (294)
T ss_dssp EEEECES-TTTTTS-S-SS--S--SSEEEEEE---------HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHH
T ss_pred EEEEeccChhhhhcccccc--CCCCCEEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHH
Confidence 332 2444433332222 22333333321 123333222 22344 34446667765432 245778
Q ss_pred HHHHHHhcCcEEe
Q 038416 173 IARTARNLGIIVI 185 (387)
Q Consensus 173 l~~~~~~~~~~li 185 (387)
+.+.++++|+-++
T Consensus 152 ~~~~a~~~g~~l~ 164 (294)
T PF04392_consen 152 LRKAAKKLGIELV 164 (294)
T ss_dssp HHHHHHHTT-EEE
T ss_pred HHHHHHHcCCEEE
Confidence 8888889998665
No 428
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=51.77 E-value=2.2e+02 Score=26.99 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhcCCCCeEEEc-CCCCc--c---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---c--CceE
Q 038416 83 SQAIEISLSVLARPGANILIP-RPGYP--L---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---E--NTVA 151 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~-~p~~~--~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~--~~~~ 151 (387)
|+.+..+...+.+.|.+|.+. .-.|. . +..++. ..|+++... .+++++.+++. . +...
T Consensus 255 TTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae--~lgipv~v~---------~d~~~L~~aL~~lk~~~~~Dv 323 (436)
T PRK11889 255 TTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVK--TIGFEVIAV---------RDEAAMTRALTYFKEEARVDY 323 (436)
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhh--hcCCcEEec---------CCHHHHHHHHHHHHhccCCCE
Confidence 555555555566667555433 22332 1 222333 344443322 14555555552 1 3567
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHH---HhcCcEEeeccccc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTA---RNLGIIVIADEVYN 191 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~---~~~~~~li~D~~~~ 191 (387)
|++-.+.... -+.+.+.++.++. ..+.+++++|....
T Consensus 324 VLIDTaGRs~---kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 324 ILIDTAGKNY---RASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EEEeCccccC---cCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 7776663211 1223344444444 44567778886544
No 429
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=51.56 E-value=42 Score=30.53 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=42.3
Q ss_pred CCeEEEcCCCCc-chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeC-CCCCccccCCHHHHHHHH
Q 038416 97 GANILIPRPGYP-LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIIN-PGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 97 g~~vl~~~p~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~-p~nptG~~~~~~~~~~l~ 174 (387)
+.+|++.+-+.- ++.+.+. ..|.++..+|.+ .+.+++.+ -+++.|+|+| |.+|.-.. ..+..+.
T Consensus 179 ~~~Vv~iD~GvK~nIlr~L~--~rg~~vtVVP~~------t~~eeIl~---~~pDGiflSNGPGDP~~~~---~~i~~ik 244 (368)
T COG0505 179 GKHVVVIDFGVKRNILRELV--KRGCRVTVVPAD------TSAEEILA---LNPDGIFLSNGPGDPAPLD---YAIETIK 244 (368)
T ss_pred CcEEEEEEcCccHHHHHHHH--HCCCeEEEEcCC------CCHHHHHh---hCCCEEEEeCCCCChhHHH---HHHHHHH
Confidence 345665555443 5566666 788888888763 35666554 3788898887 68884333 3355555
Q ss_pred HHHHh
Q 038416 175 RTARN 179 (387)
Q Consensus 175 ~~~~~ 179 (387)
++...
T Consensus 245 ~l~~~ 249 (368)
T COG0505 245 ELLGT 249 (368)
T ss_pred HHhcc
Confidence 55443
No 430
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=51.34 E-value=31 Score=26.20 Aligned_cols=49 Identities=22% Similarity=0.392 Sum_probs=27.0
Q ss_pred CChhhH-HHhhccCceEEEEeCCCCCcccc-CCHHHH---HHHHHHHHhcCcEEe
Q 038416 136 VDLDGV-EALADENTVAIVIINPGNPCGNV-FSYQHL---QKIARTARNLGIIVI 185 (387)
Q Consensus 136 ~~~~~l-~~~~~~~~~~v~l~~p~nptG~~-~~~~~~---~~l~~~~~~~~~~li 185 (387)
+++.++ ..++..+...+++.+-| |+|.. +|.+++ ++|.+.|+..++.++
T Consensus 51 v~~R~I~~~al~~~A~~vIl~HNH-PsG~~~PS~~D~~~T~~L~~~~~~l~I~ll 104 (123)
T PF04002_consen 51 VDPREIFRRALRLNASSVILAHNH-PSGDPEPSDADIALTRRLKKAARLLGIELL 104 (123)
T ss_dssp CSHHHHHHHHHHTT-SEEEEEEE--TTS--S--HHHHHHHHHHHHHHHHHT-EEE
T ss_pred ccHHHHHHHHHhhCCceEEEEEEc-CCCCCCCCHhHHHHHHHHHHHHHHcCCeee
Confidence 355544 45666676666655422 55654 566666 788888888877553
No 431
>PRK08265 short chain dehydrogenase; Provisional
Probab=50.67 E-value=1.4e+02 Score=25.72 Aligned_cols=54 Identities=19% Similarity=-0.002 Sum_probs=30.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~ 129 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++..+..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D 60 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA--SLGERARFIATD 60 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCeeEEEEec
Confidence 456666665555555666677788888775443332333444 445455555543
No 432
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=50.61 E-value=90 Score=29.30 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=64.0
Q ss_pred CCCCCCCCEEEcC-----ChHHHHHHHHHhhcCCCCeEEEcCCCC--cchHHHhhccCCCceeeeeccCCCCCccCChhh
Q 038416 68 PYKLSPEDVYLTL-----GCSQAIEISLSVLARPGANILIPRPGY--PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140 (387)
Q Consensus 68 ~~~~~~~~i~~~~-----g~~~a~~~~~~~l~~~g~~vl~~~p~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 140 (387)
|.++-+..+++-. |=++.+..+...+.+.+ +|++..-.= ..+...+. ++|.....+.+..+ .+++.
T Consensus 87 GGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~--RL~~~~~~l~l~aE----t~~e~ 159 (456)
T COG1066 87 GGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRAD--RLGLPTNNLYLLAE----TNLED 159 (456)
T ss_pred cCCcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHH--HhCCCccceEEehh----cCHHH
Confidence 3345555555433 33667777777777777 666543322 23455555 67755444444433 36788
Q ss_pred HHHhhcc-CceEEEEeCCC--------CCcccc-CCHHHHHHHHHHHHhcCcEEee
Q 038416 141 VEALADE-NTVAIVIINPG--------NPCGNV-FSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 141 l~~~~~~-~~~~v~l~~p~--------nptG~~-~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.+.++. ++.++++-+-+ +..|.+ .-.+=-.+|.++|++.|+.+++
T Consensus 160 I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 160 IIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 8887754 56666555442 122332 2223356788899999987653
No 433
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=50.19 E-value=1.7e+02 Score=25.48 Aligned_cols=26 Identities=8% Similarity=0.229 Sum_probs=10.9
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
.+.+....+.....+++++.+.-||+
T Consensus 153 ~eri~~i~~~~~gfiy~vs~~G~TG~ 178 (256)
T TIGR00262 153 DERLKQIAEKSQGFVYLVSRAGVTGA 178 (256)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 34444443333334444333445555
No 434
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=50.00 E-value=1.3e+02 Score=24.24 Aligned_cols=90 Identities=18% Similarity=0.126 Sum_probs=48.0
Q ss_pred EEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEe
Q 038416 76 VYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 76 i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 155 (387)
|+++.++-..=..++..|++.|-+|......-..... ..+.++...++ .|++.+.+++. +...|+.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~ 67 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHA 67 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEEC
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeee-------hhhhhhhhhhh-hcchhhhh
Confidence 3444433333344555666667666554333222221 24444443322 37788888887 45555555
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
.+.++. .....+.+++.|++.++
T Consensus 68 ~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 68 AGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp CHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhcc----ccccccccccccccccc
Confidence 443322 14667888888887654
No 435
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=47.90 E-value=77 Score=29.53 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=57.4
Q ss_pred CChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCcc-CChhhHHHhhc---cCceEEEE
Q 038416 80 LGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWE-VDLDGVEALAD---ENTVAIVI 154 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~l~~~~~---~~~~~v~l 154 (387)
.|--++-..+...+...+ +.-++.++++.... -.+....+-++..++. ++.+. .+.+.|.+.++ ++.+++++
T Consensus 73 vG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~-K~Rv~s~nQQllRvD~--Ee~~~~~~~~~ll~~~~~~l~~~~~vVL 149 (467)
T COG2870 73 VGKDEAGKALIELLKANGIDSDLLRDKNRPTIV-KLRVLSRNQQLLRLDF--EEKFPIEDENKLLEKIKNALKSFDALVL 149 (467)
T ss_pred eccchhHHHHHHHHHhcCcccceEeecCCCcee-eeeeecccceEEEecc--cccCcchhHHHHHHHHHHHhhcCCEEEE
Confidence 333333333343443322 44455566554321 1221134455655543 43332 33444554443 36677877
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
+.-. -|++.+ .+.++++|++.|+++++|---.+
T Consensus 150 SDY~--KG~L~~---~q~~I~~ar~~~~pVLvDPKg~D 182 (467)
T COG2870 150 SDYA--KGVLTN---VQKMIDLAREAGIPVLVDPKGKD 182 (467)
T ss_pred eccc--cccchh---HHHHHHHHHHcCCcEEECCCCcc
Confidence 6644 566644 89999999999999999944443
No 436
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=46.96 E-value=1.4e+02 Score=26.55 Aligned_cols=87 Identities=20% Similarity=0.260 Sum_probs=54.6
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCC--ceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC-
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNN--LEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF- 165 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~- 165 (387)
++.-|.+.|..|++|=-+-.......+ ..| .++.+.+.+. .|.+++.+++....++|=++.-..+|+..-
T Consensus 77 vvnklak~GSQviiPyR~d~~~~r~lk--vmGdLGQvl~~~fd~-----~DedSIr~vvk~sNVVINLIGrd~eTknf~f 149 (391)
T KOG2865|consen 77 VVNKLAKMGSQVIIPYRGDEYDPRHLK--VMGDLGQVLFMKFDL-----RDEDSIRAVVKHSNVVINLIGRDYETKNFSF 149 (391)
T ss_pred HHHHHhhcCCeEEEeccCCccchhhee--ecccccceeeeccCC-----CCHHHHHHHHHhCcEEEEeeccccccCCccc
Confidence 344466789999998544443333444 333 2566665543 478999998876666665555556676541
Q ss_pred ---CHHHHHHHHHHHHhcCc
Q 038416 166 ---SYQHLQKIARTARNLGI 182 (387)
Q Consensus 166 ---~~~~~~~l~~~~~~~~~ 182 (387)
...--++|+.+|++-|+
T Consensus 150 ~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 150 EDVNVHIAERLARICKEAGV 169 (391)
T ss_pred ccccchHHHHHHHHHHhhCh
Confidence 12224889999999886
No 437
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=46.69 E-value=42 Score=27.39 Aligned_cols=110 Identities=16% Similarity=0.233 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHhhcCCCCeEEEcCCCCcc-h--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeC
Q 038416 80 LGCSQAIEISLSVLARPGANILIPRPGYPL-Y--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIIN 156 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 156 (387)
+|=|+-+...+..+...|.+|++..|.... + ..... +.|...... ... .-++.++.+.+..+..+|++-.
T Consensus 12 sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~~~~I~s--~~g~~~~~~-~~~----~~~~~~~~~~~~~~~dvI~IDE 84 (176)
T PF00265_consen 12 SGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYGEDKIVS--HDGISLEAI-VDP----IDNLFEIIDILENDYDVIGIDE 84 (176)
T ss_dssp SSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCCSSEEEH--TTSCEEEEE-SSE----ESSGGGGGGGCCTTCSEEEESS
T ss_pred ChhHHHHHHHHHHHHhCCCeEEEEEecccCcCCCCeEEe--cCCCccccc-ccc----hhhHHHHHHHhccCCCEEEEec
Confidence 444444444455555677888887765532 1 12333 556555444 110 1134555555555678888877
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
.|. ++ +++.++++.+...|+.|++=.--.+ |.+.++.+..
T Consensus 85 aQF-----f~-~~i~~l~~~~~~~g~~Vi~~GL~~d--f~~~~F~~~~ 124 (176)
T PF00265_consen 85 AQF-----FD-EQIVQLVEILANKGIPVICAGLDTD--FRGEPFGGSP 124 (176)
T ss_dssp GGG-----ST-TTHHHHHHHHHHTT-EEEEEEESB---TTSSB-TTHH
T ss_pred hHh-----hH-HHHHHHHHHHHhCCCeEEEEeeCCc--cccCcchhHH
Confidence 665 56 6788899998899999998766665 3466665543
No 438
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=46.38 E-value=43 Score=25.92 Aligned_cols=58 Identities=28% Similarity=0.343 Sum_probs=40.1
Q ss_pred cCChhhHHHhhcc-CceEEEEeCCCCCccccCC-HHHHHHHHHHHHhc--CcEE-eecccccc
Q 038416 135 EVDLDGVEALADE-NTVAIVIINPGNPCGNVFS-YQHLQKIARTARNL--GIIV-IADEVYNH 192 (387)
Q Consensus 135 ~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~-~~~~~~l~~~~~~~--~~~l-i~D~~~~~ 192 (387)
..+++.|.+.+++ +...+++-.|-+..|..-+ ...++++++..++. +++| .+||.++.
T Consensus 37 ~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 5688999998865 5778888889776666432 34466666655443 7766 78998874
No 439
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=46.20 E-value=94 Score=28.12 Aligned_cols=78 Identities=10% Similarity=0.077 Sum_probs=49.5
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHH-HhcC
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTA-RNLG 181 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~-~~~~ 181 (387)
-.|+|.+..+... ..+.+...+-+++ ..-++.++++++.+.+.+++..-.. +..+..++.+++ ++++
T Consensus 73 Gvpvy~sv~ea~~--~~~~D~avI~VPa----~~v~dai~Ea~~aGI~~~ViiteGf------pe~d~~~l~~~~~~~~g 140 (317)
T PTZ00187 73 GLPVFATVKEAKK--ATGADASVIYVPP----PHAASAIIEAIEAEIPLVVCITEGI------PQHDMVKVKHALLSQNK 140 (317)
T ss_pred CccccCCHHHHhc--ccCCCEEEEecCH----HHHHHHHHHHHHcCCCEEEEECCCC------chhhHHHHHHHHhhcCC
Confidence 6789999888888 6455544443322 2347788888888888877766553 223344555555 4588
Q ss_pred cEEeecccccc
Q 038416 182 IIVIADEVYNH 192 (387)
Q Consensus 182 ~~li~D~~~~~ 192 (387)
+.+|==.+...
T Consensus 141 ~rliGPNc~Gi 151 (317)
T PTZ00187 141 TRLIGPNCPGI 151 (317)
T ss_pred CEEECCCCceE
Confidence 88775555543
No 440
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=46.04 E-value=62 Score=24.13 Aligned_cols=49 Identities=20% Similarity=0.378 Sum_probs=29.3
Q ss_pred CChhh-HHHhhccCceEEEEeCCCCCcccc-CCHHHH---HHHHHHHHhcCcEEe
Q 038416 136 VDLDG-VEALADENTVAIVIINPGNPCGNV-FSYQHL---QKIARTARNLGIIVI 185 (387)
Q Consensus 136 ~~~~~-l~~~~~~~~~~v~l~~p~nptG~~-~~~~~~---~~l~~~~~~~~~~li 185 (387)
+++.+ +..++..+...+++.+- .|+|.. +|.+++ ++|.+.|+.-|+.++
T Consensus 46 v~~R~i~~~aL~~~A~~vil~HN-HPsG~~~PS~~D~~~T~~l~~~~~~l~i~ll 99 (113)
T cd08071 46 VHPREIFKEALRHNAAAIILAHN-HPSGDPTPSREDIELTKRLKEAGELLGIRLL 99 (113)
T ss_pred cCHHHHHHHHHHHhhheEEEEee-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEe
Confidence 34444 44567667666666553 367776 455554 566777777776543
No 441
>smart00642 Aamy Alpha-amylase domain.
Probab=45.60 E-value=26 Score=28.26 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
.++++++++.|+++|+.||.|-+...
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 48999999999999999999999875
No 442
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=45.53 E-value=37 Score=25.92 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=23.6
Q ss_pred hhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 139 DGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 139 ~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.+++.+..++.+++++.... . -+.+.+.|++++++++.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~~-----~----p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGLE-----P----PPELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcCC-----C----CHHHHHHHHHhCCcEEE
Confidence 345666677888999887552 2 36677788899998764
No 443
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=45.00 E-value=1.5e+02 Score=28.47 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=37.6
Q ss_pred ChhhHHHhhccCceEEEEeCCCC-CccccCCHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 137 DLDGVEALADENTVAIVIINPGN-PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p~n-ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
-++.++++.+.+.+.+++..... .+|.- ..+.-+++.+.|+++|+.++--.+.....
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~ 134 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIIN 134 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEec
Confidence 35666777777888776665433 33321 11224789999999999999888766543
No 444
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.40 E-value=1.9e+02 Score=27.46 Aligned_cols=132 Identities=11% Similarity=0.142 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhh-cCCCCCC---CCCEEEc----CChHHHHHHHHHhhcCCCCeEEE-cCCCCcc-hHHHhhccCCCcee
Q 038416 54 SARRGIADYLNR-DLPYKLS---PEDVYLT----LGCSQAIEISLSVLARPGANILI-PRPGYPL-YEIHAAGSNNNLEA 123 (387)
Q Consensus 54 ~lr~~ia~~~~~-~~~~~~~---~~~i~~~----~g~~~a~~~~~~~l~~~g~~vl~-~~p~~~~-~~~~~~~~~~g~~~ 123 (387)
-+.+++.++++. ...+... |.-|+++ +|=|+...-+...|.+.|.+|++ ..-.|-+ -.+.++ .++-+
T Consensus 77 iV~eELv~llG~~~~~~~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~RpAA~eQL~--~La~q- 153 (451)
T COG0541 77 IVYEELVKLLGGENSELNLAKKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRPAAIEQLK--QLAEQ- 153 (451)
T ss_pred HHHHHHHHHhCCCCcccccCCCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCChHHHHHHH--HHHHH-
Confidence 345666677763 2222222 2334443 55566666666777777766654 4444532 223333 33322
Q ss_pred eeeccCCCCCccCChhhHH-----HhhccCceEEEEeCCC--CCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 124 RHYDLLPEKRWEVDLDGVE-----ALADENTVAIVIINPG--NPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 124 ~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~v~l~~p~--nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
+.+|+.+. +..-|+-++. .+-.....++++-... .---..+ +|+++|.+..+.+.+++|+|..-+
T Consensus 154 ~~v~~f~~-~~~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~ide~Lm--~El~~Ik~~~~P~E~llVvDam~G 225 (451)
T COG0541 154 VGVPFFGS-GTEKDPVEIAKAALEKAKEEGYDVVIVDTAGRLHIDEELM--DELKEIKEVINPDETLLVVDAMIG 225 (451)
T ss_pred cCCceecC-CCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccccHHHH--HHHHHHHhhcCCCeEEEEEecccc
Confidence 12222222 2133444443 3323345666665542 1111111 567778888888899999998765
No 445
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=43.90 E-value=64 Score=28.96 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=47.5
Q ss_pred EEcCCCCcchHHHhhccC--CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC-CccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPLYEIHAAGSN--NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN-PCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n-ptG~~~~~~~~~~l~~~~ 177 (387)
+.-.|+|.+..+... . -.+-++.+|. ..-++.++++.+.+.+.+++..... .+| ..+.+.+++
T Consensus 52 i~G~~~y~sv~dlp~--~~~~DlAvI~vPa------~~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~a 117 (300)
T PLN00125 52 HLGLPVFNTVAEAKA--ETKANASVIYVPP------PFAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALN 117 (300)
T ss_pred EcCeeccCCHHHHhh--ccCCCEEEEecCH------HHHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHHH
Confidence 345677777666655 3 2333343432 1246778888888888777766543 333 245556678
Q ss_pred HhcCcEEeecccccc
Q 038416 178 RNLGIIVIADEVYNH 192 (387)
Q Consensus 178 ~~~~~~li~D~~~~~ 192 (387)
+++++.++==.+.+.
T Consensus 118 r~~girviGPNc~Gi 132 (300)
T PLN00125 118 RQSKTRLIGPNCPGI 132 (300)
T ss_pred hhcCCEEECCCCcee
Confidence 899998875555543
No 446
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.66 E-value=1.2e+02 Score=21.71 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=41.2
Q ss_pred cchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 108 PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
..|...+. ..|.+.... ...++..-....|++.+. ++++|++..-. .+-.-...+.+.|+++|++++.=
T Consensus 13 ~~~~~~~~--~~G~~~~~h--g~~~~~~~~~~~l~~~i~-~aD~VIv~t~~------vsH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 13 RRYKRILE--KYGGKLIHH--GRDGGDEKKASRLPSKIK-KADLVIVFTDY------VSHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHH--HcCCEEEEE--ecCCCCccchhHHHHhcC-CCCEEEEEeCC------cChHHHHHHHHHHHHcCCcEEEE
Confidence 35777888 889887776 112222223334777665 44555443221 22244788888999999987653
No 447
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=43.33 E-value=2.3e+02 Score=24.89 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=47.4
Q ss_pred HHHHHHHhhcCCC-CeEEEcCCCCc---chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 85 AIEISLSVLARPG-ANILIPRPGYP---LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 85 a~~~~~~~l~~~g-~~vl~~~p~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
+++..+.-+.+.| |.|++++--+. .+...++ ..|+..+.+-. +. -+.+.++...+.....|++++....
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~--~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~Gv 179 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCN--LYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGV 179 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHH--HcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCC
Confidence 3444444445555 67777664443 2334445 56666554421 11 1345555554444445555555556
Q ss_pred ccccCC-HHHHHHHHHHHHhc-CcEEee
Q 038416 161 CGNVFS-YQHLQKIARTARNL-GIIVIA 186 (387)
Q Consensus 161 tG~~~~-~~~~~~l~~~~~~~-~~~li~ 186 (387)
||+.-. .++++++++..+++ +.++.+
T Consensus 180 TG~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 180 TGLKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCCCccccHHHHHHHHHHHHhcCCCEEE
Confidence 776311 24466666666654 444443
No 448
>PLN02460 indole-3-glycerol-phosphate synthase
Probab=42.84 E-value=23 Score=32.14 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=50.6
Q ss_pred eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
.|++....|.+..+.++ ........+|+. ..+|-+|+.++.++-.-+..+|+|+. .++++++++++.+.|+
T Consensus 157 SVLTd~~~F~Gs~e~L~--~vr~~~v~lPvL-rKDFIID~yQI~eAr~~GADAVLLIa------aiL~~~~L~~l~~~A~ 227 (338)
T PLN02460 157 SVLTDEKYFQGSFENLE--AIRNAGVKCPLL-CKEFIVDAWQIYYARSKGADAILLIA------AVLPDLDIKYMLKICK 227 (338)
T ss_pred EEecCcCcCCCCHHHHH--HHHHcCCCCCEe-eccccCCHHHHHHHHHcCCCcHHHHH------HhCCHHHHHHHHHHHH
Confidence 35554555555444443 211111344554 46788999999887655667776543 3467789999999999
Q ss_pred hcCcEEee
Q 038416 179 NLGIIVIA 186 (387)
Q Consensus 179 ~~~~~li~ 186 (387)
+.|+-.++
T Consensus 228 ~LGme~LV 235 (338)
T PLN02460 228 SLGMAALI 235 (338)
T ss_pred HcCCeEEE
Confidence 99987766
No 449
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=42.20 E-value=1.4e+02 Score=26.26 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhcCCCCeEEEcC-CCCcc-----hHHHhhccCCCceeeeeccCCCCCccCChh-----hHHHhhccCceE
Q 038416 83 SQAIEISLSVLARPGANILIPR-PGYPL-----YEIHAAGSNNNLEARHYDLLPEKRWEVDLD-----GVEALADENTVA 151 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~-p~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~ 151 (387)
|+....+...+.+.|.+|++.+ -.|.. ...++. ..|.++..... ..|+. .++.+...+...
T Consensus 86 TTt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~--~~~i~~~~~~~------~~dp~~~~~~~l~~~~~~~~D~ 157 (272)
T TIGR00064 86 TTTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAK--RLGVDVIKQKE------GADPAAVAFDAIQKAKARNIDV 157 (272)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHH--hCCeEEEeCCC------CCCHHHHHHHHHHHHHHCCCCE
Confidence 4444444445566776665443 22321 233445 56654432221 12333 233333456777
Q ss_pred EEEeCCCC-CccccCCHHHHHHHHHHHH------hcCcEEeecccc
Q 038416 152 IVIINPGN-PCGNVFSYQHLQKIARTAR------NLGIIVIADEVY 190 (387)
Q Consensus 152 v~l~~p~n-ptG~~~~~~~~~~l~~~~~------~~~~~li~D~~~ 190 (387)
|++-.|.. +. ...-.++++++.+.+. ..++++++|...
T Consensus 158 ViIDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 158 VLIDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred EEEeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 77777643 32 1222256777777777 677888888863
No 450
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=42.06 E-value=67 Score=27.28 Aligned_cols=46 Identities=17% Similarity=0.333 Sum_probs=29.9
Q ss_pred hhHHHhhccCceEEEEeCCCCCcccc-CCHHHH---HHHHHHHHhcCcEEe
Q 038416 139 DGVEALADENTVAIVIINPGNPCGNV-FSYQHL---QKIARTARNLGIIVI 185 (387)
Q Consensus 139 ~~l~~~~~~~~~~v~l~~p~nptG~~-~~~~~~---~~l~~~~~~~~~~li 185 (387)
+-+..++..+...|++++-| |+|.. +|.+++ +++.+.|+-.|+.++
T Consensus 150 eI~~~Al~~~A~~vIlaHNH-PSG~~~PS~~Di~~T~~l~~a~~~lgI~ll 199 (218)
T TIGR00608 150 EIFKEALKLSASALILAHNH-PSGEPSPSQEDILITERLRKAAELLGIELL 199 (218)
T ss_pred HHHHHHHHhhCCeEEEEeec-CCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 34556777777777766533 77775 566665 567777777776543
No 451
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=41.74 E-value=45 Score=31.84 Aligned_cols=69 Identities=20% Similarity=0.404 Sum_probs=41.8
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCc---------eEEE--E-eCC--CCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENT---------VAIV--I-INP--GNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~v~--l-~~p--~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
..++.+..+.+.+..+|.+.++..-++.+... ..+. . ..+ ..+.+-.++.+++++|++.|+++||-
T Consensus 33 ~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~rgI~ 112 (445)
T cd06569 33 AYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKARHIE 112 (445)
T ss_pred HhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHHcCCE
Confidence 67777777777666666665544433221100 0010 0 011 12345678999999999999999998
Q ss_pred Eee
Q 038416 184 VIA 186 (387)
Q Consensus 184 li~ 186 (387)
||-
T Consensus 113 VIP 115 (445)
T cd06569 113 VIP 115 (445)
T ss_pred EEE
Confidence 773
No 452
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=41.73 E-value=86 Score=27.72 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCCCCEEEcCChHHHHHHHHHhhcCCCC--eEEEc--CCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHh
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVLARPGA--NILIP--RPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEAL 144 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~--~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 144 (387)
....++++|.|-+..+..++....+.|. +|++. .|...+ ....+. ..|.++..++- ..+-..
T Consensus 105 I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~--~~gi~v~~i~d----------~~~~~~ 172 (282)
T PF01008_consen 105 INDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELA--EAGIPVTLIPD----------SAVGYV 172 (282)
T ss_dssp C-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHH--HTT-EEEEE-G----------GGHHHH
T ss_pred ccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhh--hcceeEEEEec----------hHHHHH
Confidence 3556788887776666666666555553 44443 454444 222333 57888777642 222333
Q ss_pred hccCceEEEEe-CCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 145 ADENTVAIVII-NPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 145 ~~~~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
+......|++- ..--+.|.+...---..++-.|+.+++++++=
T Consensus 173 m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 173 MPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp HHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred HHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 33213333222 11112232222222456667888999988654
No 453
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=41.10 E-value=1.1e+02 Score=27.69 Aligned_cols=22 Identities=23% Similarity=0.129 Sum_probs=15.6
Q ss_pred HHHHHHHhcCeEEEcCCccCCC
Q 038416 334 FCLKLAKEESVIILPGRTVGMK 355 (387)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~~ 355 (387)
-+..++.+.||.-.+|.+|...
T Consensus 269 ~~~~~a~~~g~i~k~g~w~~~~ 290 (321)
T TIGR02012 269 EIIDLAVELDIIKKAGSWYSYG 290 (321)
T ss_pred HHHHHHHhCCcEEcccCEEEEC
Confidence 3344567889999898877553
No 454
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.92 E-value=1e+02 Score=23.01 Aligned_cols=45 Identities=18% Similarity=0.361 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 331 DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
..+++..+.+++||.+ +++-.-.++|+-...++.|..+++++..+
T Consensus 106 TNEl~~ylvR~k~iPi-----------LelkYP~s~Eea~~~VnkI~~FL~sLe~~ 150 (152)
T COG4050 106 TNELCVYLVRRKGIPI-----------LELKYPRSEEEAIDFVNKIANFLKSLEAQ 150 (152)
T ss_pred cchHHHHHhhhcCCce-----------EEEeCCCcHHHHHHHHHHHHHHHHhhhhh
Confidence 3467777778888765 45556678888899999999999998764
No 455
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=40.63 E-value=66 Score=23.87 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=31.5
Q ss_pred cHHHHHHHHHHhcCeEEE---cCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIIL---PGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~---~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
++..+..+| .++|+.+. .-+.|...+..-+=++.+++++++.++.|++.+++
T Consensus 12 Da~~l~~~L-~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 12 DADDLSDAL-NENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHH-HHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH--
T ss_pred hHHHHHHHH-HHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhcC
Confidence 444555555 55687755 22334444444455578899999999999998764
No 456
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4.1.1.48 from EC) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (5.3.1.24 from EC) (PRAI) activity (see IPR001240 from INTERPRO), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (2.4.2 from EC) (GATase) N-terminal domain (see IPR000991 from INTERPRO). A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand []. ; GO: 0004425 indole-3-glycerol-phosphate synthase activity; PDB: 1VC4_A 1PII_A 1JCM_P 1I4N_B 1J5T_A 3TSM_B 4FB7_A 3QJA_A 1JUL_A 2C3Z_A ....
Probab=40.33 E-value=33 Score=29.88 Aligned_cols=50 Identities=18% Similarity=0.334 Sum_probs=36.2
Q ss_pred CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 132 KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
.+|-+|+.++.++-.-+..+|+++. ..++.+.++++.+.|++.|+-.++.
T Consensus 115 KDFIid~~QI~eA~~~GADaVLLI~------~~L~~~~l~~l~~~a~~lGle~lVE 164 (254)
T PF00218_consen 115 KDFIIDPYQIYEARAAGADAVLLIA------AILSDDQLEELLELAHSLGLEALVE 164 (254)
T ss_dssp ES---SHHHHHHHHHTT-SEEEEEG------GGSGHHHHHHHHHHHHHTT-EEEEE
T ss_pred ccCCCCHHHHHHHHHcCCCEeehhH------HhCCHHHHHHHHHHHHHcCCCeEEE
Confidence 5788999999998777788877654 3467788999999999999877654
No 457
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=40.11 E-value=3.1e+02 Score=27.10 Aligned_cols=108 Identities=14% Similarity=0.079 Sum_probs=66.2
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCc-------chHHHhhccCCCcee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP-------LYEIHAAGSNNNLEA 123 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~-------~~~~~~~~~~~g~~~ 123 (387)
..+.|++.+++...- +.|+.|+++.|+.+=...+...+++.|..+-+..+.|. ...+.++ .....+
T Consensus 9 ~n~~l~~wv~e~~~l-----~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k~~~~~~~rsdp~DvAR--ve~rTf 81 (601)
T PRK04210 9 KNPKLLEWVAEVAEL-----TQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEKRPNSFLARSDPSDVAR--VEDRTF 81 (601)
T ss_pred CCHHHHHHHHHHHHh-----hCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCCCCceeeccCChhhhhh--cccceE
Confidence 446888888887753 68999999999999888888888888865555433332 2345566 555555
Q ss_pred eeecc----CCCCCccCChhhHHHhhcc-------CceEEEEeCCCCCccccCC
Q 038416 124 RHYDL----LPEKRWEVDLDGVEALADE-------NTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 124 ~~~~~----~~~~~~~~~~~~l~~~~~~-------~~~~v~l~~p~nptG~~~~ 166 (387)
+..+- .+.++ -+++++..+.+.. ..-+.++.-.-.|.|..++
T Consensus 82 I~s~~~~dagp~nn-w~~p~e~~~~l~~lf~G~M~GRTMyVipfsmGP~gSp~s 134 (601)
T PRK04210 82 ICSEKEEDAGPTNN-WMDPAEMRETLKGLFKGCMRGRTMYVVPFSMGPLGSPFA 134 (601)
T ss_pred EecCchhhcCCccC-cCCHHHHHHHHHHhcCCccCCCeEEEeeeeeCCCCCCcc
Confidence 44422 12233 3577777776632 2223333333446665543
No 458
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=39.77 E-value=93 Score=28.31 Aligned_cols=116 Identities=13% Similarity=0.009 Sum_probs=64.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCC--CCeEEEcCCCCcchHHHhhcc-CCCceeeeeccCCCCCccCChhhHHHhhccCce
Q 038416 74 EDVYLTLGCSQAIEISLSVLARP--GANILIPRPGYPLYEIHAAGS-NNNLEARHYDLLPEKRWEVDLDGVEALADENTV 150 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 150 (387)
..+.++.|..+.-.--+..|++. +-.+++.+..|.......... ...-..-..++. .+.-.+++..+++++....
T Consensus 96 ~~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~vi--aGNV~T~e~a~~Li~aGAD 173 (343)
T TIGR01305 96 QNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIM--AGNVVTGEMVEELILSGAD 173 (343)
T ss_pred ceEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEE--EecccCHHHHHHHHHcCCC
Confidence 36677777766555555566544 434555555554322221100 111000001111 1224678888888887777
Q ss_pred EEEEe-CC------CCCcccc-CCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 151 AIVII-NP------GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 151 ~v~l~-~p------~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
+|.+. -| .-.+|+- ....-+.++++.++.+++++|.|.-..
T Consensus 174 ~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr 222 (343)
T TIGR01305 174 IVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCT 222 (343)
T ss_pred EEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcC
Confidence 77654 22 2245555 455557888888888899999997544
No 459
>PRK00024 hypothetical protein; Reviewed
Probab=39.29 E-value=71 Score=27.28 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=30.0
Q ss_pred hhHHHhhccCceEEEEeCCCCCcccc-CCHHHH---HHHHHHHHhcCcEEe
Q 038416 139 DGVEALADENTVAIVIINPGNPCGNV-FSYQHL---QKIARTARNLGIIVI 185 (387)
Q Consensus 139 ~~l~~~~~~~~~~v~l~~p~nptG~~-~~~~~~---~~l~~~~~~~~~~li 185 (387)
+-+..++..+...|++++-| |+|.. +|.+++ ++|.+.|+--|+.++
T Consensus 156 ei~~~Al~~~A~~iIl~HNH-PSG~~~PS~~D~~~T~~l~~a~~~l~I~ll 205 (224)
T PRK00024 156 EIVKRALKLNAAALILAHNH-PSGDPEPSQADILITKRLKEAGELLGIRLL 205 (224)
T ss_pred HHHHHHHHhhccceEEEecC-CCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 34555777777777776633 77775 566665 566777777776543
No 460
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=38.93 E-value=21 Score=30.98 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=49.4
Q ss_pred eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
.|++..+.|.+-.+.++ .. .....+|+. ..+|-+|+.++.++-.-+..+|+++- ..++.++++++.+.|+
T Consensus 84 SVLTd~~~F~Gs~e~L~--~v-~~~v~~PvL-~KDFiiD~yQI~~Ar~~GADavLLI~------~~L~~~~l~el~~~A~ 153 (254)
T COG0134 84 SVLTDPKYFQGSFEDLR--AV-RAAVDLPVL-RKDFIIDPYQIYEARAAGADAVLLIV------AALDDEQLEELVDRAH 153 (254)
T ss_pred EEecCccccCCCHHHHH--HH-HHhcCCCee-eccCCCCHHHHHHHHHcCcccHHHHH------HhcCHHHHHHHHHHHH
Confidence 34454444444444443 11 122334443 45788999999987655666664432 2477788999999999
Q ss_pred hcCcEEeec
Q 038416 179 NLGIIVIAD 187 (387)
Q Consensus 179 ~~~~~li~D 187 (387)
++|+-+++.
T Consensus 154 ~LGm~~LVE 162 (254)
T COG0134 154 ELGMEVLVE 162 (254)
T ss_pred HcCCeeEEE
Confidence 999866653
No 461
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=38.32 E-value=3.6e+02 Score=25.67 Aligned_cols=50 Identities=6% Similarity=0.147 Sum_probs=25.0
Q ss_pred hhHHHhhcc--CceEEEEeCCCCCccccCCHHHHHHHHHHHH----hcCcEEeeccccc
Q 038416 139 DGVEALADE--NTVAIVIINPGNPCGNVFSYQHLQKIARTAR----NLGIIVIADEVYN 191 (387)
Q Consensus 139 ~~l~~~~~~--~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~----~~~~~li~D~~~~ 191 (387)
+++.+.+.. +...|++-.|.... .....+.++.++.. ...++++++....
T Consensus 288 ~~l~~~l~~~~~~DlVlIDt~G~~~---~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~~ 343 (424)
T PRK05703 288 KELAKALEQLRDCDVILIDTAGRSQ---RDKRLIEELKALIEFSGEPIDVYLVLSATTK 343 (424)
T ss_pred HhHHHHHHHhCCCCEEEEeCCCCCC---CCHHHHHHHHHHHhccCCCCeEEEEEECCCC
Confidence 444444432 46777777764322 22233444444443 2345677776554
No 462
>PLN00191 enolase
Probab=38.23 E-value=1.6e+02 Score=28.27 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=58.2
Q ss_pred ChHHHHHHHHHhhcCCCCeEEEcCCCCcc-hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC
Q 038416 81 GCSQAIEISLSVLARPGANILIPRPGYPL-YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 81 g~~~a~~~~~~~l~~~g~~vl~~~p~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 159 (387)
++.+++...- .|.++-+-+.+++|.... +..+.+ .... ..+++-.++.+..+++.+.+.++.+..-+++.-++.
T Consensus 296 s~~e~i~~~~-~L~~~y~I~~IEDPl~~~D~eg~~~--Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q 370 (457)
T PLN00191 296 SGDELIDLYK-EFVSDYPIVSIEDPFDQDDWEHWAK--LTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ 370 (457)
T ss_pred CHHHHHHHHH-HHhhcCCcEEEECCCCcccHHHHHH--HHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc
Confidence 3444444433 444444567889998653 333333 2111 223332223333568899988877665556666665
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
.|.+ .+..+++++|+.+|+.+++-.
T Consensus 371 -iGGI---Tea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 371 -IGTV---TESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred -cCCH---HHHHHHHHHHHHCCCEEEeCC
Confidence 3434 467889999999999887644
No 463
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=37.79 E-value=37 Score=31.12 Aligned_cols=63 Identities=17% Similarity=0.396 Sum_probs=36.4
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..+++...+.+.+..+|.+....+.++-.... ..++.+ |..++.+++++|++.|+.+||-||-
T Consensus 29 ~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 29 YYKLNVLHLHLSDDQGFRLESKSYPELTEKGA-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HcCCcEEEEEEecCCCCccccCCCccccccCc-----cccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 67777777777655555554433322211100 000002 3489999999999999999998774
No 464
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=37.45 E-value=52 Score=24.44 Aligned_cols=64 Identities=17% Similarity=0.131 Sum_probs=30.4
Q ss_pred hcCCC-CeEEEcCCCCc--------chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCC
Q 038416 93 LARPG-ANILIPRPGYP--------LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPG 158 (387)
Q Consensus 93 l~~~g-~~vl~~~p~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~ 158 (387)
+.+.| ++||.-.|... .....++ ..|+..+++|+....-..-+++.+.++++. ...+++.|..+
T Consensus 23 la~~GfktVInlRpd~E~~~qp~~~~~~~~a~--~~Gl~y~~iPv~~~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG 96 (110)
T PF04273_consen 23 LAAQGFKTVINLRPDGEEPGQPSSAEEAAAAE--ALGLQYVHIPVDGGAITEEDVEAFADALESLPKPVLAHCRSG 96 (110)
T ss_dssp HHHCT--EEEE-S-TTSTTT-T-HHCHHHHHH--HCT-EEEE----TTT--HHHHHHHHHHHHTTTTSEEEE-SCS
T ss_pred HHHCCCcEEEECCCCCCCCCCCCHHHHHHHHH--HcCCeEEEeecCCCCCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 44456 67777655432 2456778 899999999986542212233444445543 34566777644
No 465
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=37.19 E-value=1.1e+02 Score=22.54 Aligned_cols=69 Identities=13% Similarity=0.229 Sum_probs=38.9
Q ss_pred CCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 106 GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 106 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
.|.++.+.+. ....+.+.+-.+.. .-.+-+.++++.+. -|++.-|-- .+.++.++|.+.++++|..+.
T Consensus 50 ~~~~~~~ll~--~~~~D~V~I~tp~~----~h~~~~~~~l~~g~-~v~~EKP~~-----~~~~~~~~l~~~a~~~~~~~~ 117 (120)
T PF01408_consen 50 VYTDLEELLA--DEDVDAVIIATPPS----SHAEIAKKALEAGK-HVLVEKPLA-----LTLEEAEELVEAAKEKGVKVM 117 (120)
T ss_dssp EESSHHHHHH--HTTESEEEEESSGG----GHHHHHHHHHHTTS-EEEEESSSS-----SSHHHHHHHHHHHHHHTSCEE
T ss_pred chhHHHHHHH--hhcCCEEEEecCCc----chHHHHHHHHHcCC-EEEEEcCCc-----CCHHHHHHHHHHHHHhCCEEE
Confidence 3444555555 55555555544321 12344444454333 455555542 456888888888888887665
Q ss_pred e
Q 038416 186 A 186 (387)
Q Consensus 186 ~ 186 (387)
+
T Consensus 118 V 118 (120)
T PF01408_consen 118 V 118 (120)
T ss_dssp E
T ss_pred E
Confidence 4
No 466
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=36.84 E-value=1.7e+02 Score=21.56 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=50.8
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCcc
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCG 162 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG 162 (387)
+.+..++..|.+.|=++..+. +....++ ..|+++..+.-..+.+ + .++.+.+.. +..-+++..|. +.-
T Consensus 12 ~~~~~~a~~l~~~G~~i~AT~----gTa~~L~--~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~ 80 (112)
T cd00532 12 AMLVDLAPKLSSDGFPLFATG----GTSRVLA--DAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRR 80 (112)
T ss_pred HHHHHHHHHHHHCCCEEEECc----HHHHHHH--HcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCc
Confidence 334444444445565555443 3445556 6777766553222211 2 445556655 45445555553 111
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
..-...+-..|.+.|.+++++++.+-.
T Consensus 81 ~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 81 DRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred ccccCCChHHHHHHHHHcCCCEEECHH
Confidence 011224467888889999999987743
No 467
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=36.47 E-value=97 Score=23.58 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=36.7
Q ss_pred cCChhhHHHhhccCceEEEE--eCC---CCCccccCCHHHHHHHHHHHHhcCc
Q 038416 135 EVDLDGVEALADENTVAIVI--INP---GNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 135 ~~~~~~l~~~~~~~~~~v~l--~~p---~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
.+|+..+.+++..+.+.|++ |.| +...|...-...++.+.++..+.|+
T Consensus 39 rv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 39 RVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred ccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 68999999999888777766 344 4578888877778888777776653
No 468
>PF00154 RecA: recA bacterial DNA recombination protein; InterPro: IPR013765 The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response []. In homologous recombination, the protein functions as a DNA-dependent ATPase, promoting synapsis, heteroduplex formation and strand exchange between homologous DNAs []. RecA also acts as a protease cofactor that promotes autodigestion of the lexA product and phage repressors. The proteolytic inactivation of the lexA repressor by an activated form of recA may cause a derepression of the 20 or so genes involved in the SOS response, which regulates DNA repair, induced mutagenesis, delayed cell division and prophage induction in response to DNA damage []. RecA is a protein of about 350 amino-acid residues. Its sequence is very well conserved [, , ] among eubacterial species. It is also found in the chloroplast of plants []. RecA-like proteins are found in archaea and diverse eukaryotic organisms, like fission yeast, mouse or human. In the filament visualised by X-ray crystallography, beta-strand 3, the loop C-terminal to beta-strand 2, and alpha-helix D of the core domain form one surface that packs against alpha-helix A and beta-strand 0 (the N-terminal domain) of an adjacent monomer during polymerisation []. The core ATP-binding site domain is well conserved, with 14 invariant residues. It contains the nucleotide binding loop between beta-strand 1 and alpha-helix C. The Escherichia coli sequence GPESSGKT matches the consensus sequence of amino acids (G/A)XXXXGK(T/S) for the Walker A box (also referred to as the P-loop) found in a number of nucleoside triphosphate (NTP)-binding proteins. Another nucleotide binding motif, the Walker B box is found at beta-strand 4 in the RecA structure. The Walker B box is characterised by four hydrophobic amino acids followed by an acidic residue (usually aspartate). Nucleotide specificity and additional ATP binding interactions are contributed by the amino acid residues at beta-strand 2 and the loop C-terminal to that strand, all of which are greater than 90% conserved among bacterial RecA proteins.; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair; PDB: 2IN0_A 1MO3_A 3IFJ_A 2IN8_A 2IMZ_B 1G18_A 1MO4_A 3IGD_A 2L8L_A 2IN9_A ....
Probab=36.22 E-value=97 Score=28.13 Aligned_cols=31 Identities=10% Similarity=-0.009 Sum_probs=15.8
Q ss_pred hcCCCCeEEEcCCCCcchHHHhhccCCCceeee
Q 038416 93 LARPGANILIPRPGYPLYEIHAAGSNNNLEARH 125 (387)
Q Consensus 93 l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~ 125 (387)
+.+.|..++..++.+.-...+++ ..|.++..
T Consensus 77 ~q~~g~~~a~ID~e~~ld~~~a~--~lGvdl~r 107 (322)
T PF00154_consen 77 AQKQGGICAFIDAEHALDPEYAE--SLGVDLDR 107 (322)
T ss_dssp HHHTT-EEEEEESSS---HHHHH--HTT--GGG
T ss_pred hhcccceeEEecCcccchhhHHH--hcCccccc
Confidence 33456666666777766667777 77775533
No 469
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=35.93 E-value=2.6e+02 Score=23.28 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=19.2
Q ss_pred ceEEEEeC-CCCCccccCCHHHHHHHHHHHHh
Q 038416 149 TVAIVIIN-PGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 149 ~~~v~l~~-p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
..-++++. ..|+||+.+. +-..++++|.+
T Consensus 136 ~VdvVlSDMapnaTGvr~~--Dh~~~i~LC~s 165 (232)
T KOG4589|consen 136 PVDVVLSDMAPNATGVRIR--DHYRSIELCDS 165 (232)
T ss_pred cccEEEeccCCCCcCcchh--hHHHHHHHHHH
Confidence 33345554 4799998764 35678888864
No 470
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional
Probab=35.66 E-value=94 Score=26.97 Aligned_cols=55 Identities=18% Similarity=0.291 Sum_probs=41.4
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.+|+. ..++-+|+.++.++..-+..+|+++.. .++.++++++.+.|++.|+-.++
T Consensus 102 ~~PvL-~KDFIid~~QI~ea~~~GADavLLI~~------~L~~~~l~~l~~~a~~lGle~LV 156 (247)
T PRK13957 102 KIPVL-RKDFILDEIQIREARAFGASAILLIVR------ILTPSQIKSFLKHASSLGMDVLV 156 (247)
T ss_pred CCCEE-eccccCCHHHHHHHHHcCCCEEEeEHh------hCCHHHHHHHHHHHHHcCCceEE
Confidence 34543 457789999999977667777766543 35667899999999999987665
No 471
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=35.48 E-value=1.1e+02 Score=28.20 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=31.4
Q ss_pred ChhhHHHhhccCceEEEEeCC-CCCccc--cCCHHHHHHHHHHHHhcCc
Q 038416 137 DLDGVEALADENTVAIVIINP-GNPCGN--VFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p-~nptG~--~~~~~~~~~l~~~~~~~~~ 182 (387)
+++.+..++.....+|++..+ -+-.+. .++.+++++.++.|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 567777777766777776655 333333 3777888888888888876
No 472
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=35.41 E-value=2.8e+02 Score=23.64 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=58.5
Q ss_pred EEEcCChHHHHHHHHHhhcCCCCeEE--E--cCCC----Cc-----chHHHhhccCCCceeeeeccCCCCCccCChhhHH
Q 038416 76 VYLTLGCSQAIEISLSVLARPGANIL--I--PRPG----YP-----LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE 142 (387)
Q Consensus 76 i~~~~g~~~a~~~~~~~l~~~g~~vl--~--~~p~----~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 142 (387)
++..|||-....++.+++.+ -+.+. . +... |+ -....+. ..|++.+.++.... ..--.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~--algipl~~~~~~~~--~e~~~e~l~ 78 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAE--SIGIPLIKLYTEGT--EEDEVEELK 78 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHH--HcCCCeEEeecCCC--ccHHHHHHH
Confidence 45668888888888887665 33221 1 1111 11 2345566 77888766554322 122345565
Q ss_pred Hhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 143 ALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 143 ~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
++++. +...++ +|.+.+......+-++|.+.|+..
T Consensus 79 ~~l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 79 GILHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEE
Confidence 55543 344444 789999888889999999988753
No 473
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=35.35 E-value=3.5e+02 Score=25.20 Aligned_cols=111 Identities=20% Similarity=0.213 Sum_probs=55.1
Q ss_pred CCCCCCEEEc-----CChHHHHHHHHHhhcCCCCeEEEcCCCCc--chHHHhhccCCCceeeeeccCCCCCccCChhhHH
Q 038416 70 KLSPEDVYLT-----LGCSQAIEISLSVLARPGANILIPRPGYP--LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE 142 (387)
Q Consensus 70 ~~~~~~i~~~-----~g~~~a~~~~~~~l~~~g~~vl~~~p~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 142 (387)
+..+..+++- .|=|..+..++..+.+.|.+|++....-. .....+. ..|.....+.+.. ..+++.+.
T Consensus 78 Gi~~GslvLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi~~Ra~--rlg~~~~~l~l~~----e~~le~I~ 151 (372)
T cd01121 78 GLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQIKLRAD--RLGISTENLYLLA----ETNLEDIL 151 (372)
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHHHHHHH--HcCCCcccEEEEc----cCcHHHHH
Confidence 4555555543 22255555555555566666765432221 1222233 4554333332221 23577777
Q ss_pred Hhhcc-CceEEEEeCCCCCc-----cccCCHH----HHHHHHHHHHhcCcEEee
Q 038416 143 ALADE-NTVAIVIINPGNPC-----GNVFSYQ----HLQKIARTARNLGIIVIA 186 (387)
Q Consensus 143 ~~~~~-~~~~v~l~~p~npt-----G~~~~~~----~~~~l~~~~~~~~~~li~ 186 (387)
+.+.. +++.|++-+-++-. +..-+.. -+.+|.++++++++.+|+
T Consensus 152 ~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 152 ASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred HHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 77654 56666665543311 1111122 245678889999986643
No 474
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=34.87 E-value=3.6e+02 Score=26.88 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=59.2
Q ss_pred cCChHHHHHHHHHhhcCCCCeEEEc-CCCCcch------HHHhhccCCCce-e-eeeccCCCCCccCChhhHHHhhccCc
Q 038416 79 TLGCSQAIEISLSVLARPGANILIP-RPGYPLY------EIHAAGSNNNLE-A-RHYDLLPEKRWEVDLDGVEALADENT 149 (387)
Q Consensus 79 ~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~------~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~ 149 (387)
-.+-..|...+..++.+ +.+|++. +..-.++ ...++ ..|.+ + .++|--..++|+++.+.+++....+.
T Consensus 52 l~~m~~a~~ri~~ai~~-~e~I~I~gDyD~DGitstail~~~L~--~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~ 128 (575)
T PRK11070 52 LSGIEKAVELLYNALRE-GTRIIVVGDFDADGATSTALSVLALR--SLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGA 128 (575)
T ss_pred hhCHHHHHHHHHHHHHC-CCEEEEEEecCccHHHHHHHHHHHHH--HcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCC
Confidence 46677777777777654 4555443 3333322 23344 66763 4 34443235789999999998877677
Q ss_pred eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccc
Q 038416 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 150 ~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~ 190 (387)
++++.+... .. =.+-++.|++.|+-+|+=|-|
T Consensus 129 ~LiItvD~G----i~-----~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 129 QLIVTVDNG----IS-----SHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred CEEEEEcCC----cC-----CHHHHHHHHHCCCCEEEECCC
Confidence 777666532 22 133445677889866654444
No 475
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=34.74 E-value=4e+02 Score=25.21 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=55.7
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceE
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA 151 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 151 (387)
..++++- |+.+-...++..|.+.| ..|.+.+-++......+. ..|.++. .++++.+.+. ..++
T Consensus 178 ~~~vlvI-GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~--~~~~~~~------------~l~el~~~l~-~~Dv 241 (414)
T COG0373 178 DKKVLVI-GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAK--KLGAEAV------------ALEELLEALA-EADV 241 (414)
T ss_pred cCeEEEE-cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH--HhCCeee------------cHHHHHHhhh-hCCE
Confidence 3344433 33344667777787777 888898989988788888 7773333 4556666554 3444
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
|+.+ .+.|+ -+++.+.+++..+.=+ + ++++|=+
T Consensus 242 Viss-Tsa~~-~ii~~~~ve~a~~~r~--~-~livDia 274 (414)
T COG0373 242 VISS-TSAPH-PIITREMVERALKIRK--R-LLIVDIA 274 (414)
T ss_pred EEEe-cCCCc-cccCHHHHHHHHhccc--C-eEEEEec
Confidence 4433 22222 2355566665554222 3 7888854
No 476
>PRK09354 recA recombinase A; Provisional
Probab=34.49 E-value=1.8e+02 Score=26.81 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=18.3
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeee
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARH 125 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~ 125 (387)
.+.|..+++.+..+......++ ..|..+..
T Consensus 85 ~~~G~~~~yId~E~s~~~~~a~--~lGvdld~ 114 (349)
T PRK09354 85 QKAGGTAAFIDAEHALDPVYAK--KLGVDIDN 114 (349)
T ss_pred HHcCCcEEEECCccchHHHHHH--HcCCCHHH
Confidence 3456666666666665556666 67765433
No 477
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=34.27 E-value=1e+02 Score=26.98 Aligned_cols=57 Identities=19% Similarity=0.285 Sum_probs=41.8
Q ss_pred eeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecc
Q 038416 125 HYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
.+|+.. .++-+++.++.++...+..+|.+... .++.+.++++++.|++.|..+++|-
T Consensus 111 ~iPvl~-kdfi~~~~qi~~a~~~GAD~VlLi~~------~l~~~~l~~li~~a~~lGl~~lvev 167 (260)
T PRK00278 111 SLPVLR-KDFIIDPYQIYEARAAGADAILLIVA------ALDDEQLKELLDYAHSLGLDVLVEV 167 (260)
T ss_pred CCCEEe-eeecCCHHHHHHHHHcCCCEEEEEec------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 344432 45778888988888777777765432 2345789999999999999888873
No 478
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=34.25 E-value=1.8e+02 Score=22.59 Aligned_cols=57 Identities=7% Similarity=-0.007 Sum_probs=36.8
Q ss_pred HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc
Q 038416 111 EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL 180 (387)
Q Consensus 111 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~ 180 (387)
...++ ..|.+++++-. ...++++.+++. .++.+|.++..... ....++++.+.+++.
T Consensus 24 ~~~lr--~~G~eVi~LG~------~vp~e~i~~~a~~~~~d~V~lS~~~~~-----~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 24 DRALT--EAGFEVINLGV------MTSQEEFIDAAIETDADAILVSSLYGH-----GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHH--HCCCEEEECCC------CCCHHHHHHHHHHcCCCEEEEcCcccc-----CHHHHHHHHHHHHhc
Confidence 44556 78999888753 356788777654 46777776554432 234577777777765
No 479
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=34.12 E-value=3.3e+02 Score=24.01 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=46.0
Q ss_pred hcCCCCeEEEcCCCCcc-hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHH
Q 038416 93 LARPGANILIPRPGYPL-YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 93 l~~~g~~vl~~~p~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
|.+.|-.|.+....... ..+.++ ..|.++..++- ..++..|.+++.+.++. ++.++++.+.+ ++.+..
T Consensus 27 l~~~g~~v~f~~~~~~~~~~~~i~--~~g~~v~~~~~--~~~~~~d~~~~~~~l~~~~~d~vV~D~y~------~~~~~~ 96 (279)
T TIGR03590 27 LHAQGAEVAFACKPLPGDLIDLLL--SAGFPVYELPD--ESSRYDDALELINLLEEEKFDILIVDHYG------LDADWE 96 (279)
T ss_pred HHHCCCEEEEEeCCCCHHHHHHHH--HcCCeEEEecC--CCchhhhHHHHHHHHHhcCCCEEEEcCCC------CCHHHH
Confidence 43456555443333322 345666 78888776653 22344577777777765 56777776653 343434
Q ss_pred HHHHHHHHhcC-cEEeecccc
Q 038416 171 QKIARTARNLG-IIVIADEVY 190 (387)
Q Consensus 171 ~~l~~~~~~~~-~~li~D~~~ 190 (387)
+.+.+ .+ .++++||..
T Consensus 97 ~~~k~----~~~~l~~iDD~~ 113 (279)
T TIGR03590 97 KLIKE----FGRKILVIDDLA 113 (279)
T ss_pred HHHHH----hCCeEEEEecCC
Confidence 44332 23 456667653
No 480
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=33.82 E-value=34 Score=30.35 Aligned_cols=28 Identities=32% Similarity=0.463 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+.||.|-+.....
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 4899999999999999999998887543
No 481
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=33.74 E-value=1.6e+02 Score=26.89 Aligned_cols=116 Identities=15% Similarity=0.048 Sum_probs=62.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcC--CCCeEEEcCCCCcchHHHhhcc-CCCceeeeeccCCCCCccCChhhHHHhhccCce
Q 038416 74 EDVYLTLGCSQAIEISLSVLAR--PGANILIPRPGYPLYEIHAAGS-NNNLEARHYDLLPEKRWEVDLDGVEALADENTV 150 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 150 (387)
..+.++.|..+.-.--+..|.+ +|-.+++.+..|........+. ......-.+++. .+.-.+.+..+++++....
T Consensus 97 ~~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vI--aGNV~T~e~a~~Li~aGAD 174 (346)
T PRK05096 97 KHVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTIC--AGNVVTGEMVEELILSGAD 174 (346)
T ss_pred ceEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEE--EecccCHHHHHHHHHcCCC
Confidence 4677777766554445555554 5644555555554322222100 111111011111 2224577888887776665
Q ss_pred EEE-------EeCCCCCccccCCH-HHHHHHHHHHHhcCcEEeeccccc
Q 038416 151 AIV-------IINPGNPCGNVFSY-QHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 151 ~v~-------l~~p~nptG~~~~~-~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
++- +|...-.+|+=.|+ ..+.+.++.++++|+++|.|.=..
T Consensus 175 ~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~ 223 (346)
T PRK05096 175 IVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCT 223 (346)
T ss_pred EEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcc
Confidence 552 23333456665443 337778888899999999996543
No 482
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=33.60 E-value=2.9e+02 Score=23.16 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=53.1
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceE
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA 151 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 151 (387)
....|++..||..|...+- .|++.|-.|.+..|....-...+. ..| ++..+.- . ...+.+ . +..
T Consensus 8 ~gk~vlVvGgG~va~rk~~-~Ll~~ga~VtVvsp~~~~~l~~l~--~~~-~i~~~~~----~--~~~~dl----~-~~~- 71 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKAR-LLLKAGAQLRVIAEELESELTLLA--EQG-GITWLAR----C--FDADIL----E-GAF- 71 (205)
T ss_pred CCCeEEEECcCHHHHHHHH-HHHHCCCEEEEEcCCCCHHHHHHH--HcC-CEEEEeC----C--CCHHHh----C-CcE-
Confidence 4457888888888877664 455667677777776653322222 233 3443321 1 122222 1 233
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE-eecccc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIV-IADEVY 190 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l-i~D~~~ 190 (387)
+++..++++ +--.++.+.|++.++++ ++|+..
T Consensus 72 lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 72 LVIAATDDE-------ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred EEEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 344444442 22467888999999887 455543
No 483
>PLN03244 alpha-amylase; Provisional
Probab=33.55 E-value=64 Score=33.05 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=29.7
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeeccccccccc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF 195 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~ 195 (387)
|+-..-++++++++++.|++.|+-||.|-++..+.-
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 444444679999999999999999999999987653
No 484
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=33.42 E-value=1.8e+02 Score=24.65 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=51.1
Q ss_pred EEEcCChHHHHHHHHHhhcCCCCe--EEEc---CCC---Cc-----chHHHhhccCCCceeeeeccCCCCCccCChhhHH
Q 038416 76 VYLTLGCSQAIEISLSVLARPGAN--ILIP---RPG---YP-----LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE 142 (387)
Q Consensus 76 i~~~~g~~~a~~~~~~~l~~~g~~--vl~~---~p~---~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 142 (387)
+++-|||-....++.+++.+ -+. +++. ... |+ -....+. ..|++.+.+++.... .--.+++.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~--algipl~~~~~~g~~--~~~~~~l~ 78 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAE--ALGIPLIEIPTSGDE--EDYVEDLK 78 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHH--HHT--EEEEEE---C--CCHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHH--HCCCCEEEEEccCcc--chhhHHHH
Confidence 45678888888887777655 321 1111 111 11 2355666 788888877764222 12356666
Q ss_pred Hhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 143 ALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 143 ~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
++++. +...++ +|.+.+......+-++|.+.|+..+
T Consensus 79 ~~l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 79 EALKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHHCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 66653 233333 6888888888888889999887543
No 485
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=33.17 E-value=3.2e+02 Score=24.40 Aligned_cols=83 Identities=12% Similarity=0.187 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 82 CSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
..+++..+-++. +.| |.|++..|.|....+-.. .. -...+.++. ++..++++.+|..
T Consensus 81 t~~ai~~a~~A~-~~Gad~v~v~pP~y~~~~~~~l--------~~-----------~f~~ia~a~-~~lpv~iYn~P~~- 138 (294)
T TIGR02313 81 HDETLELTKFAE-EAGADAAMVIVPYYNKPNQEAL--------YD-----------HFAEVADAV-PDFPIIIYNIPGR- 138 (294)
T ss_pred HHHHHHHHHHHH-HcCCCEEEEcCccCCCCCHHHH--------HH-----------HHHHHHHhc-cCCCEEEEeCchh-
Confidence 345655555543 345 888888888865311000 00 012222222 1345666666664
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecc
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
||..++.+.+.+|++.+ .++.-|=|.
T Consensus 139 tg~~l~~~~l~~L~~~~--pnv~giK~s 164 (294)
T TIGR02313 139 AAQEIAPKTMARLRKDC--PNIVGAKES 164 (294)
T ss_pred cCcCCCHHHHHHHHhhC--CCEEEEEeC
Confidence 78888877666666422 255555554
No 486
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=33.14 E-value=1.3e+02 Score=28.59 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=26.0
Q ss_pred ccCceEEEEeCCCC-CccccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 146 DENTVAIVIINPGN-PCGNVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 146 ~~~~~~v~l~~p~n-ptG~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
..+...|++-.|.. +.- ..-..++.++.+.+....+++|+|..
T Consensus 180 ~~~~DvVIIDTaGr~~~d-~~l~~eL~~i~~~~~p~e~lLVvda~ 223 (428)
T TIGR00959 180 ENGFDVVIVDTAGRLQID-EELMEELAAIKEILNPDEILLVVDAM 223 (428)
T ss_pred hcCCCEEEEeCCCccccC-HHHHHHHHHHHHhhCCceEEEEEecc
Confidence 44566777776642 210 11125566667777777889999965
No 487
>cd04751 Commd3 COMM_Domain containing protein 3. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several family members have been shown to bind and inhibit NF-kappaB.
Probab=32.88 E-value=78 Score=22.76 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.8
Q ss_pred EEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 359 RIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 359 Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
++.|.++.+++..++..|+++.+.+.+
T Consensus 66 ~i~f~c~~e~L~~Li~~Lk~A~~~~e~ 92 (95)
T cd04751 66 DINFTCTLEQLQDLVNKLKDAAKNIER 92 (95)
T ss_pred eEEEEeCHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999887764
No 488
>PRK15452 putative protease; Provisional
Probab=32.83 E-value=1.2e+02 Score=28.90 Aligned_cols=24 Identities=8% Similarity=-0.053 Sum_probs=11.6
Q ss_pred EEEEe-eCChHhHHHHHHHHHHHHH
Q 038416 358 LRIAF-AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 358 ~Ri~~-~~~~e~~~~~~~~l~~~~~ 381 (387)
+||=. ..+.+.+...++.-++++.
T Consensus 285 ~KIEgR~ks~~yv~~vv~~YR~ald 309 (443)
T PRK15452 285 LKIEGRTKSFYYVARTAQVYRKAID 309 (443)
T ss_pred EEEEeeeCCHHHHHHHHHHHHHHHH
Confidence 44444 2345555555555555443
No 489
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=32.20 E-value=43 Score=23.39 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=19.7
Q ss_pred HHHHHHHHHhcCcEEeecccccc
Q 038416 170 LQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
-.+|.++++++|++++.|..-+.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LAr 51 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLVD 51 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHHH
Confidence 67888999999999999977664
No 490
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=31.98 E-value=3.2e+02 Score=24.55 Aligned_cols=85 Identities=16% Similarity=0.103 Sum_probs=46.8
Q ss_pred CCCCC-EEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc--hHHHhhccCCCceeeeeccCCCCC-ccCChhhHHHhhc
Q 038416 71 LSPED-VYLTLGCSQAIEISLSVLARPGANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKR-WEVDLDGVEALAD 146 (387)
Q Consensus 71 ~~~~~-i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~ 146 (387)
+++.. |+=.+++..++..++.+-. .|-++++.-|.-.+ ....++ .+|++++.+|.. .+ ..--.+.+++...
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~--a~GAevi~t~~~--~g~~~~a~~~a~el~~ 133 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLR--ALGAEVILTPGA--PGNMKGAIERAKELAA 133 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHH--HcCCEEEEcCCC--CCchHHHHHHHHHHHH
Confidence 45554 4445666777777766643 46665555555444 456777 899999988762 22 1112333333444
Q ss_pred cCce-EEEEeCCCCC
Q 038416 147 ENTV-AIVIINPGNP 160 (387)
Q Consensus 147 ~~~~-~v~l~~p~np 160 (387)
..+. +++...-.||
T Consensus 134 ~~p~~~~~~~Qf~Np 148 (300)
T COG0031 134 EIPGYAVWLNQFENP 148 (300)
T ss_pred hCCCceEchhhcCCC
Confidence 4444 6655443443
No 491
>PRK06194 hypothetical protein; Provisional
Probab=31.89 E-value=3.4e+02 Score=23.66 Aligned_cols=67 Identities=18% Similarity=-0.011 Sum_probs=33.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
..+++|.++..-=..+...|.+.|.+|++....-........ ....+.++..+..+. -|.+++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~ 74 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALA 74 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHH
Confidence 356666655544455556677788887765543222222222 002244555555432 2455555544
No 492
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=31.58 E-value=48 Score=33.14 Aligned_cols=27 Identities=37% Similarity=0.577 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
.++++++++.|++.|+-||.|-++...
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 488999999999999999999999864
No 493
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=31.47 E-value=35 Score=22.54 Aligned_cols=24 Identities=29% Similarity=0.451 Sum_probs=19.3
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcC
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
..-|.|.+ +.+.++.|++++++|+
T Consensus 14 ~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 14 IRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 34466877 7799999999999987
No 494
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=31.40 E-value=1.7e+02 Score=20.27 Aligned_cols=47 Identities=11% Similarity=0.079 Sum_probs=28.8
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
.++..++++.+ .++|++.+- .++.-.+.+..+|+.++++++.-..-.
T Consensus 16 ~~~v~kai~~gkaklViiA~D-------~~~~~~~~i~~~c~~~~Vp~~~~~s~~ 63 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAED-------ADPRLTEKVEALANEKGVPVSKVDSMK 63 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECC-------CCHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 35556666654 445554332 222337889999999999886554433
No 495
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=31.37 E-value=1.5e+02 Score=25.85 Aligned_cols=67 Identities=19% Similarity=0.232 Sum_probs=37.2
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc-cCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
.+.-+.+.-|+..+.+ +.+.+++.+. +-.++ ++.|. .|. ..-.+.+++|.++++..++++++|.=--
T Consensus 75 sYsPdLIVHP~l~~~~---av~~i~k~L~-Rlhav-VIGPG--LGRdp~~~k~i~~iley~~~~dvP~VIDaDGL 142 (306)
T KOG3974|consen 75 SYSPDLIVHPVLDQEN---AVDIIEKLLQ-RLHAV-VIGPG--LGRDPAILKEIAKILEYLRGKDVPLVIDADGL 142 (306)
T ss_pred hcCCceeecccccCCc---hHhHHHHHHh-heeEE-EECCC--CCCCHHHHHHHHHHHHHHhcCCCcEEEcCCce
Confidence 4444444444432222 4455565454 22333 33442 222 1223668999999999999999997543
No 496
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=31.34 E-value=1.7e+02 Score=25.98 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=33.4
Q ss_pred CccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEee
Q 038416 133 RWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVIA 186 (387)
Q Consensus 133 ~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li~ 186 (387)
+..+|.+.+++.++ .+...+++ ..++.=+..++.+|.+++++.+.+. +++||+
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~v-~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALFA-AGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEE-CcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 45788888887654 34455543 3344445668888888888876553 355553
No 497
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=31.31 E-value=1.9e+02 Score=22.68 Aligned_cols=56 Identities=21% Similarity=0.207 Sum_probs=38.2
Q ss_pred CChhhHHHhhcc-CceEEEEeCCCCCccccCCHH-HHHHHHHHHH-hcCcEE-eeccccc
Q 038416 136 VDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQ-HLQKIARTAR-NLGIIV-IADEVYN 191 (387)
Q Consensus 136 ~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~-~~~~l~~~~~-~~~~~l-i~D~~~~ 191 (387)
.+++.|.+.+.+ +...|++--|.|..|...+.. ..+++++..+ +.++++ +.||-.+
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 488888887755 677888889998888876644 3666666554 345544 4566554
No 498
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=31.28 E-value=2.2e+02 Score=21.19 Aligned_cols=63 Identities=17% Similarity=0.166 Sum_probs=37.0
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.|+.+..++..+.++ + .++.+.+..+..-+++..|. |.|......+-..|.+.|-+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 577666663322222 2 44666666555555555543 324333245678999999999998764
No 499
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=31.28 E-value=2.4e+02 Score=23.89 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=62.4
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEE----c---CChHHHHHHHHHhhcCCCCeEEEcC-CCCcchHHHhhccCCCce
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYL----T---LGCSQAIEISLSVLARPGANILIPR-PGYPLYEIHAAGSNNNLE 122 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~----~---~g~~~a~~~~~~~l~~~g~~vl~~~-p~~~~~~~~~~~~~~g~~ 122 (387)
...++++.+...+.+ -+.-+-+ . +....++..++..|.+.|--.+=.. -...-....++ ..|.+
T Consensus 72 ~~~~i~~~l~~al~~------vp~a~GvnNhmGS~~T~~~~~m~~vl~~l~~~gl~FvDS~T~~~s~a~~~A~--~~gvp 143 (213)
T PF04748_consen 72 SEEEIRKRLEAALAR------VPGAVGVNNHMGSRFTSDREAMRWVLEVLKERGLFFVDSRTTPRSVAPQVAK--ELGVP 143 (213)
T ss_dssp -HHHHHHHHHHHHCC------STT-SEEEEEE-CCHHC-HHHHHHHHHHHHHTT-EEEE-S--TT-SHHHHHH--HCT--
T ss_pred CHHHHHHHHHHHHHH------CCCcEEEecCCCccccCCHHHHHHHHHHHHHcCCEEEeCCCCcccHHHHHHH--HcCCC
Confidence 456777777777743 1222111 1 2235567777777776664443122 12223456677 78888
Q ss_pred eeeeccCCCCCccCChhhHHHhh-------ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALA-------DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
.....+.-++ ..+.+.+.+.+ +.+-.+|.+.+|+..| .+.++++..-.++.|+-++
T Consensus 144 ~~~rdvfLD~--~~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 144 AARRDVFLDN--DQDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp EEE-SEETTS--T-SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred EEeeceecCC--CCCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 7665554333 25666655543 3467788888887543 3557777766667777654
No 500
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=31.13 E-value=55 Score=30.23 Aligned_cols=28 Identities=29% Similarity=0.586 Sum_probs=24.0
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
+.|-.++.+++++|++.|+++||-||-.
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VIPE 105 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVIPE 105 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 4566899999999999999999987743
Done!