Query 038416
Match_columns 387
No_of_seqs 125 out of 1896
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 18:46:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 2.7E-50 9.1E-55 379.6 36.5 372 9-385 55-426 (427)
2 1b5p_A Protein (aspartate amin 100.0 7.8E-49 2.7E-53 364.8 35.6 349 9-381 32-383 (385)
3 1bw0_A TAT, protein (tyrosine 100.0 2.3E-48 7.7E-53 365.5 37.8 373 8-385 33-415 (416)
4 3h14_A Aminotransferase, class 100.0 7.7E-47 2.6E-51 352.2 35.0 350 8-385 31-384 (391)
5 1j32_A Aspartate aminotransfer 100.0 1E-46 3.6E-51 350.9 35.8 354 9-383 31-387 (388)
6 3b46_A Aminotransferase BNA3; 100.0 6.5E-47 2.2E-51 358.4 31.2 354 8-378 57-442 (447)
7 3fvs_A Kynurenine--oxoglutarat 100.0 5.7E-47 1.9E-51 356.6 30.7 358 8-382 28-421 (422)
8 3dzz_A Putative pyridoxal 5'-p 100.0 5.1E-46 1.7E-50 346.6 36.1 354 9-384 28-390 (391)
9 3nra_A Aspartate aminotransfer 100.0 1.6E-46 5.4E-51 351.9 32.8 356 10-384 41-406 (407)
10 1gd9_A Aspartate aminotransfer 100.0 7.9E-46 2.7E-50 345.1 37.0 354 9-383 27-386 (389)
11 2x5d_A Probable aminotransfera 100.0 3.6E-46 1.2E-50 350.0 34.5 358 9-385 38-400 (412)
12 3ele_A Amino transferase; RER0 100.0 4.4E-46 1.5E-50 347.9 34.4 353 6-384 33-397 (398)
13 3jtx_A Aminotransferase; NP_28 100.0 6.1E-46 2.1E-50 346.7 34.6 345 8-380 30-395 (396)
14 3kax_A Aminotransferase, class 100.0 7.9E-46 2.7E-50 344.3 34.8 353 6-380 22-382 (383)
15 2o1b_A Aminotransferase, class 100.0 2.3E-46 7.9E-51 350.2 31.1 351 9-383 48-403 (404)
16 3fdb_A Beta C-S lyase, putativ 100.0 2.3E-46 8E-51 347.2 30.8 349 8-383 23-376 (377)
17 1c7n_A Cystalysin; transferase 100.0 1.8E-45 6.2E-50 343.9 36.7 356 8-385 31-395 (399)
18 3aow_A Putative uncharacterize 100.0 9.6E-46 3.3E-50 350.0 34.4 353 9-385 77-447 (448)
19 3e2y_A Kynurenine-oxoglutarate 100.0 4.8E-46 1.6E-50 349.0 31.3 355 8-378 23-408 (410)
20 3tcm_A Alanine aminotransferas 100.0 1.6E-45 5.4E-50 352.9 35.4 352 26-385 107-496 (500)
21 1u08_A Hypothetical aminotrans 100.0 1.7E-45 5.9E-50 342.5 34.1 348 9-378 31-385 (386)
22 1o4s_A Aspartate aminotransfer 100.0 2.4E-45 8.1E-50 341.8 34.8 344 9-381 42-387 (389)
23 2dou_A Probable N-succinyldiam 100.0 8.1E-46 2.8E-50 343.5 30.8 346 9-380 26-375 (376)
24 4dq6_A Putative pyridoxal phos 100.0 6.3E-45 2.2E-49 339.2 36.7 350 8-380 32-390 (391)
25 1d2f_A MALY protein; aminotran 100.0 7.6E-45 2.6E-49 338.6 36.2 354 8-384 28-390 (390)
26 3ihj_A Alanine aminotransferas 100.0 1.1E-45 3.6E-50 353.5 31.1 352 27-386 103-496 (498)
27 3ezs_A Aminotransferase ASPB; 100.0 8.6E-46 2.9E-50 343.3 29.6 340 9-383 24-375 (376)
28 2o0r_A RV0858C (N-succinyldiam 100.0 2.3E-45 8E-50 344.4 31.6 355 9-384 26-397 (411)
29 3l8a_A METC, putative aminotra 100.0 2.2E-45 7.4E-50 345.6 31.3 352 8-381 61-420 (421)
30 1yiz_A Kynurenine aminotransfe 100.0 2.5E-45 8.7E-50 346.1 31.2 357 9-381 38-427 (429)
31 3qgu_A LL-diaminopimelate amin 100.0 9.4E-45 3.2E-49 344.2 32.6 353 8-382 69-439 (449)
32 1xi9_A Putative transaminase; 100.0 1.6E-44 5.3E-49 338.3 33.0 362 9-385 39-405 (406)
33 2r2n_A Kynurenine/alpha-aminoa 100.0 9.5E-44 3.3E-48 334.7 34.3 321 44-383 72-424 (425)
34 2z61_A Probable aspartate amin 100.0 1.8E-43 6.3E-48 327.0 35.4 336 9-381 30-369 (370)
35 3ei9_A LL-diaminopimelate amin 100.0 8.9E-44 3E-48 335.8 33.3 350 9-381 57-426 (432)
36 1v2d_A Glutamine aminotransfer 100.0 7.4E-44 2.5E-48 330.9 32.0 340 9-385 26-373 (381)
37 1vp4_A Aminotransferase, putat 100.0 5.7E-44 2E-48 336.3 30.3 354 9-385 44-420 (425)
38 2gb3_A Aspartate aminotransfer 100.0 6E-43 2.1E-47 327.7 36.0 350 9-385 44-404 (409)
39 3ffh_A Histidinol-phosphate am 100.0 3.3E-43 1.1E-47 324.4 33.3 333 6-379 30-362 (363)
40 3g0t_A Putative aminotransfera 100.0 1.6E-43 5.4E-48 334.7 31.5 350 9-382 45-436 (437)
41 3k7y_A Aspartate aminotransfer 100.0 1.6E-43 5.4E-48 328.9 30.8 346 8-382 29-404 (405)
42 2zc0_A Alanine glyoxylate tran 100.0 6.5E-43 2.2E-47 327.4 34.9 354 9-385 35-406 (407)
43 2x5f_A Aspartate_tyrosine_phen 100.0 6.7E-44 2.3E-48 336.4 27.0 348 9-383 48-429 (430)
44 1iay_A ACC synthase 2, 1-amino 100.0 9.2E-43 3.1E-47 328.5 34.6 346 26-383 49-427 (428)
45 3ly1_A Putative histidinol-pho 100.0 6.8E-43 2.3E-47 321.2 32.6 334 7-382 15-351 (354)
46 3get_A Histidinol-phosphate am 100.0 4.6E-43 1.6E-47 323.7 30.6 332 8-380 30-364 (365)
47 3op7_A Aminotransferase class 100.0 4.7E-43 1.6E-47 324.8 29.3 326 33-385 47-373 (375)
48 3euc_A Histidinol-phosphate am 100.0 2.7E-42 9.1E-47 318.8 33.3 330 9-381 31-366 (367)
49 3rq1_A Aminotransferase class 100.0 7.3E-43 2.5E-47 328.2 29.7 351 6-385 36-417 (418)
50 2zyj_A Alpha-aminodipate amino 100.0 8.3E-43 2.8E-47 325.6 29.7 346 10-384 34-394 (397)
51 3piu_A 1-aminocyclopropane-1-c 100.0 3E-42 1E-46 325.6 33.8 351 24-385 49-434 (435)
52 3t18_A Aminotransferase class 100.0 1.9E-42 6.4E-47 324.9 30.2 348 6-385 35-412 (413)
53 4f4e_A Aromatic-amino-acid ami 100.0 1.4E-42 4.8E-47 326.4 27.6 345 9-380 50-419 (420)
54 1fg7_A Histidinol phosphate am 100.0 1.2E-41 4.1E-46 313.0 31.3 321 9-378 30-353 (356)
55 3asa_A LL-diaminopimelate amin 100.0 5.6E-42 1.9E-46 320.3 29.5 342 9-383 34-393 (400)
56 3fsl_A Aromatic-amino-acid ami 100.0 2.8E-42 9.5E-47 322.0 27.2 345 8-379 26-396 (397)
57 1lc5_A COBD, L-threonine-O-3-p 100.0 2.9E-41 9.9E-46 311.5 33.5 334 9-384 25-361 (364)
58 3d6k_A Putative aminotransfera 100.0 6.7E-43 2.3E-47 328.7 22.7 344 10-385 34-420 (422)
59 3b1d_A Betac-S lyase; HET: PLP 100.0 4.3E-46 1.5E-50 347.2 0.0 351 9-381 32-391 (392)
60 7aat_A Aspartate aminotransfer 100.0 1.2E-41 3.9E-46 318.3 26.9 348 7-380 27-400 (401)
61 3ppl_A Aspartate aminotransfer 100.0 3.9E-42 1.3E-46 324.0 23.5 348 8-384 33-421 (427)
62 3ftb_A Histidinol-phosphate am 100.0 1.6E-40 5.4E-45 306.2 33.2 332 7-381 25-359 (361)
63 3f6t_A Aspartate aminotransfer 100.0 1.1E-40 3.8E-45 321.2 31.2 348 23-385 114-527 (533)
64 1ajs_A Aspartate aminotransfer 100.0 2.8E-41 9.6E-46 316.8 26.3 346 9-383 31-411 (412)
65 3ez1_A Aminotransferase MOCR f 100.0 1.5E-41 5.2E-46 319.7 24.1 344 9-384 26-416 (423)
66 3g7q_A Valine-pyruvate aminotr 100.0 6.1E-41 2.1E-45 315.0 27.9 355 8-386 31-416 (417)
67 1yaa_A Aspartate aminotransfer 100.0 3.7E-41 1.3E-45 315.9 25.0 345 9-382 30-410 (412)
68 3if2_A Aminotransferase; YP_26 100.0 3.3E-40 1.1E-44 312.6 30.8 355 9-386 32-443 (444)
69 2zy4_A L-aspartate beta-decarb 100.0 5.4E-40 1.8E-44 316.4 31.5 351 11-384 107-523 (546)
70 3cq5_A Histidinol-phosphate am 100.0 1.7E-39 5.9E-44 300.2 32.9 330 11-381 33-366 (369)
71 2q7w_A Aspartate aminotransfer 100.0 8E-41 2.7E-45 312.1 22.9 346 9-379 27-395 (396)
72 3meb_A Aspartate aminotransfer 100.0 1E-39 3.6E-44 308.9 28.3 358 5-383 46-444 (448)
73 3fkd_A L-threonine-O-3-phospha 100.0 1.1E-39 3.8E-44 299.3 27.3 324 8-382 15-341 (350)
74 4eu1_A Mitochondrial aspartate 100.0 1.9E-40 6.5E-45 310.8 22.6 342 7-380 40-408 (409)
75 3hdo_A Histidinol-phosphate am 100.0 9.4E-39 3.2E-43 294.2 31.9 327 9-383 27-355 (360)
76 3p1t_A Putative histidinol-pho 100.0 3.2E-38 1.1E-42 288.0 34.3 308 23-380 27-334 (337)
77 3bwn_A AT1G70560, L-tryptophan 100.0 2E-40 6.7E-45 308.4 18.4 327 9-383 23-387 (391)
78 2ay1_A Aroat, aromatic amino a 100.0 1.1E-39 3.7E-44 304.2 23.1 340 9-379 27-392 (394)
79 2hox_A ALLIIN lyase 1; cystein 100.0 4.4E-40 1.5E-44 309.0 18.7 329 9-382 57-424 (427)
80 4h51_A Aspartate aminotransfer 100.0 8.3E-38 2.8E-42 290.4 26.9 350 10-385 46-419 (420)
81 1uu1_A Histidinol-phosphate am 100.0 1.3E-37 4.3E-42 283.8 27.5 314 10-379 21-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 8.3E-36 2.8E-40 278.3 30.3 335 9-384 44-393 (398)
83 1vjo_A Alanine--glyoxylate ami 100.0 7.2E-35 2.5E-39 271.5 26.8 319 24-380 43-392 (393)
84 2dr1_A PH1308 protein, 386AA l 100.0 2.4E-34 8.2E-39 267.2 28.5 322 25-384 30-380 (386)
85 1t3i_A Probable cysteine desul 100.0 1.7E-34 5.9E-39 271.2 26.8 333 10-385 29-415 (420)
86 1e5e_A MGL, methionine gamma-l 100.0 1.2E-33 4E-38 263.7 31.4 310 20-384 26-396 (404)
87 1kmj_A Selenocysteine lyase; p 100.0 4.9E-34 1.7E-38 266.9 25.7 320 25-383 34-405 (406)
88 1eg5_A Aminotransferase; PLP-d 100.0 4.1E-34 1.4E-38 265.4 24.5 324 25-385 12-378 (384)
89 3tqx_A 2-amino-3-ketobutyrate 100.0 3.6E-33 1.2E-37 260.5 29.8 333 9-384 44-397 (399)
90 2huf_A Alanine glyoxylate amin 100.0 1.3E-33 4.3E-38 263.1 26.2 321 24-385 28-385 (393)
91 2z9v_A Aspartate aminotransfer 100.0 2.8E-33 9.6E-38 260.6 27.9 322 24-384 18-372 (392)
92 1bs0_A Protein (8-amino-7-oxon 100.0 7.9E-33 2.7E-37 256.9 27.6 325 9-379 40-383 (384)
93 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 5.2E-34 1.8E-38 263.5 19.0 316 23-383 18-370 (371)
94 2w8t_A SPT, serine palmitoyltr 100.0 2.7E-32 9.3E-37 256.7 30.2 334 9-385 65-417 (427)
95 1elu_A L-cysteine/L-cystine C- 100.0 3.3E-33 1.1E-37 259.9 23.4 319 24-378 26-387 (390)
96 2bwn_A 5-aminolevulinate synth 100.0 1.1E-32 3.9E-37 257.3 26.8 322 23-383 58-400 (401)
97 1iug_A Putative aspartate amin 100.0 5.9E-33 2E-37 254.6 24.4 318 24-384 10-349 (352)
98 3lvm_A Cysteine desulfurase; s 100.0 1.5E-32 5E-37 258.4 27.6 322 25-385 33-401 (423)
99 3zrp_A Serine-pyruvate aminotr 100.0 1.6E-32 5.5E-37 254.6 27.5 319 24-384 11-364 (384)
100 4eb5_A Probable cysteine desul 100.0 2.2E-32 7.4E-37 253.6 27.9 328 25-385 11-375 (382)
101 2ch1_A 3-hydroxykynurenine tra 100.0 1.6E-32 5.4E-37 255.9 27.1 321 24-384 27-384 (396)
102 3f9t_A TDC, L-tyrosine decarbo 100.0 6.7E-32 2.3E-36 251.5 30.1 323 23-381 39-396 (397)
103 3nnk_A Ureidoglycine-glyoxylat 100.0 3.3E-32 1.1E-36 254.9 27.5 321 24-384 22-391 (411)
104 1fc4_A 2-amino-3-ketobutyrate 100.0 2.4E-32 8E-37 255.2 26.2 330 9-384 46-398 (401)
105 4hvk_A Probable cysteine desul 100.0 1.7E-31 6E-36 247.3 30.2 328 24-385 10-375 (382)
106 2yrr_A Aminotransferase, class 100.0 1.1E-32 3.9E-37 252.6 21.8 318 24-382 9-352 (353)
107 3kgw_A Alanine-glyoxylate amin 100.0 2.8E-32 9.7E-37 253.8 24.8 322 24-386 32-391 (393)
108 3isl_A Purine catabolism prote 100.0 1E-31 3.4E-36 252.0 27.9 321 24-384 20-391 (416)
109 3kki_A CAI-1 autoinducer synth 100.0 2.7E-31 9.3E-36 248.6 29.5 318 22-383 70-404 (409)
110 1v72_A Aldolase; PLP-dependent 100.0 7.6E-32 2.6E-36 247.6 24.6 318 24-384 18-354 (356)
111 3f0h_A Aminotransferase; RER07 100.0 2E-31 6.9E-36 246.6 27.4 321 24-382 28-373 (376)
112 1sff_A 4-aminobutyrate aminotr 100.0 1.6E-32 5.6E-37 258.3 20.0 329 26-384 58-425 (426)
113 1m32_A 2-aminoethylphosphonate 100.0 9.4E-32 3.2E-36 247.8 24.2 329 10-382 5-364 (366)
114 3cai_A Possible aminotransfera 100.0 1.2E-31 4.2E-36 250.7 25.2 318 25-378 37-404 (406)
115 2aeu_A Hypothetical protein MJ 100.0 3.8E-31 1.3E-35 244.3 26.5 332 4-385 24-373 (374)
116 3ffr_A Phosphoserine aminotran 100.0 3.8E-31 1.3E-35 243.4 26.1 318 24-380 13-361 (362)
117 1svv_A Threonine aldolase; str 100.0 3.1E-31 1.1E-35 243.7 24.9 319 25-383 25-358 (359)
118 1b9h_A AHBA synthase, protein 100.0 3.3E-30 1.1E-34 239.6 31.4 321 21-382 6-387 (388)
119 4adb_A Succinylornithine trans 100.0 1.4E-31 4.8E-36 250.3 22.1 322 26-385 56-402 (406)
120 2eh6_A Acoat, acetylornithine 100.0 3.2E-31 1.1E-35 245.2 24.2 324 9-379 29-374 (375)
121 2dkj_A Serine hydroxymethyltra 100.0 7.4E-31 2.5E-35 245.5 24.8 334 9-382 24-387 (407)
122 2ord_A Acoat, acetylornithine 100.0 1.6E-31 5.4E-36 249.2 19.7 314 26-382 57-396 (397)
123 1jg8_A L-ALLO-threonine aldola 100.0 5.7E-31 1.9E-35 241.0 22.2 314 25-383 15-346 (347)
124 1s0a_A Adenosylmethionine-8-am 100.0 2.6E-30 8.8E-35 243.5 26.0 339 9-385 44-426 (429)
125 2rfv_A Methionine gamma-lyase; 100.0 6.2E-30 2.1E-34 238.4 28.2 313 12-378 24-395 (398)
126 3i4j_A Aminotransferase, class 100.0 1.2E-30 4.3E-35 245.7 23.5 337 26-384 46-429 (430)
127 2bkw_A Alanine-glyoxylate amin 100.0 9.2E-31 3.1E-35 242.9 22.1 320 24-383 14-384 (385)
128 3ruy_A Ornithine aminotransfer 100.0 2.4E-30 8.1E-35 240.9 24.5 308 26-380 53-391 (392)
129 2eo5_A 419AA long hypothetical 100.0 5.7E-30 1.9E-34 240.3 26.8 321 27-383 61-418 (419)
130 3vax_A Putative uncharacterize 100.0 1.9E-31 6.3E-36 249.0 16.3 326 25-382 31-399 (400)
131 1vef_A Acetylornithine/acetyl- 100.0 3E-30 1E-34 240.4 23.8 318 26-380 62-394 (395)
132 1zod_A DGD, 2,2-dialkylglycine 100.0 1E-30 3.5E-35 246.6 20.6 332 26-383 60-432 (433)
133 3mc6_A Sphingosine-1-phosphate 100.0 1.1E-29 3.8E-34 243.6 28.1 335 24-385 74-439 (497)
134 3mad_A Sphingosine-1-phosphate 100.0 1.9E-29 6.4E-34 242.8 29.5 312 45-385 130-471 (514)
135 2oga_A Transaminase; PLP-depen 100.0 1.2E-29 3.9E-34 236.7 27.0 314 27-385 43-398 (399)
136 2pb2_A Acetylornithine/succiny 100.0 4.7E-30 1.6E-34 240.8 24.0 317 26-384 74-419 (420)
137 3a9z_A Selenocysteine lyase; P 100.0 7.5E-30 2.6E-34 240.6 25.4 322 25-385 29-430 (432)
138 2po3_A 4-dehydrase; external a 100.0 4.4E-29 1.5E-33 234.7 30.3 329 12-384 20-387 (424)
139 4ffc_A 4-aminobutyrate aminotr 100.0 2.5E-30 8.5E-35 244.8 21.5 338 26-386 81-452 (453)
140 2ez2_A Beta-tyrosinase, tyrosi 100.0 2.5E-29 8.5E-34 238.7 28.4 325 25-384 55-432 (456)
141 3dxv_A Alpha-amino-epsilon-cap 100.0 1.4E-29 4.7E-34 239.2 26.2 345 9-384 44-426 (439)
142 3nx3_A Acoat, acetylornithine 100.0 9.7E-30 3.3E-34 237.0 24.1 316 26-382 53-394 (395)
143 3ndn_A O-succinylhomoserine su 100.0 3.8E-29 1.3E-33 233.2 27.0 288 51-380 82-413 (414)
144 3lws_A Aromatic amino acid bet 100.0 3E-30 1E-34 237.1 19.2 299 44-380 41-356 (357)
145 3l44_A Glutamate-1-semialdehyd 100.0 1.2E-29 4E-34 239.3 23.4 327 26-386 72-433 (434)
146 2c0r_A PSAT, phosphoserine ami 100.0 4.1E-30 1.4E-34 236.7 19.8 316 24-383 13-361 (362)
147 1w23_A Phosphoserine aminotran 100.0 2.2E-30 7.6E-35 238.2 17.9 313 25-382 13-359 (360)
148 3pj0_A LMO0305 protein; struct 100.0 1.1E-30 3.6E-35 240.3 15.6 316 24-379 25-358 (359)
149 2c81_A Glutamine-2-deoxy-scyll 100.0 3.7E-28 1.2E-32 228.0 32.4 325 23-385 10-416 (418)
150 1ibj_A CBL, cystathionine beta 100.0 2E-29 7E-34 238.0 23.3 326 10-382 91-461 (464)
151 3n5m_A Adenosylmethionine-8-am 100.0 1.2E-29 4.3E-34 240.3 21.2 332 26-382 66-451 (452)
152 1z7d_A Ornithine aminotransfer 100.0 7.4E-29 2.5E-33 233.4 25.4 320 23-385 78-431 (433)
153 4a6r_A Omega transaminase; tra 100.0 2.7E-29 9.1E-34 238.4 22.6 334 26-385 67-451 (459)
154 1mdo_A ARNB aminotransferase; 100.0 1.8E-28 6.1E-33 228.3 27.1 314 26-383 18-386 (393)
155 3gju_A Putative aminotransfera 100.0 8.5E-29 2.9E-33 235.0 25.1 337 26-385 68-458 (460)
156 2oat_A Ornithine aminotransfer 100.0 3.9E-28 1.3E-32 228.8 29.1 328 9-382 77-438 (439)
157 1ax4_A Tryptophanase; tryptoph 100.0 1.3E-28 4.6E-33 234.3 25.7 330 28-384 55-442 (467)
158 1qz9_A Kynureninase; kynurenin 100.0 1.3E-28 4.5E-33 230.9 24.9 310 25-383 39-402 (416)
159 3n0l_A Serine hydroxymethyltra 100.0 2.7E-28 9.3E-33 228.8 26.4 327 25-383 36-389 (417)
160 3a8u_X Omega-amino acid--pyruv 100.0 1.3E-28 4.5E-33 233.1 24.2 328 27-383 68-447 (449)
161 3oks_A 4-aminobutyrate transam 100.0 8.3E-29 2.8E-33 234.3 21.6 334 26-382 78-450 (451)
162 3uwc_A Nucleotide-sugar aminot 100.0 2.9E-28 1E-32 225.3 24.8 312 25-383 17-371 (374)
163 3k28_A Glutamate-1-semialdehyd 100.0 6.6E-29 2.3E-33 233.8 20.4 325 26-384 70-428 (429)
164 3dod_A Adenosylmethionine-8-am 100.0 1.2E-28 4.1E-33 233.2 22.2 330 26-385 61-445 (448)
165 2fnu_A Aminotransferase; prote 100.0 1.9E-27 6.6E-32 219.8 29.2 315 24-384 9-373 (375)
166 1rv3_A Serine hydroxymethyltra 100.0 2.8E-28 9.6E-33 232.2 24.1 337 25-382 55-430 (483)
167 3tfu_A Adenosylmethionine-8-am 100.0 1.1E-28 3.8E-33 233.4 21.0 324 26-385 92-455 (457)
168 1gc0_A Methionine gamma-lyase; 100.0 2.2E-27 7.7E-32 221.0 29.3 280 50-378 65-396 (398)
169 2cb1_A O-acetyl homoserine sul 100.0 1.2E-26 3.9E-31 217.2 33.9 312 19-377 27-410 (412)
170 2dgk_A GAD-beta, GADB, glutama 100.0 3.1E-27 1.1E-31 223.7 30.1 338 24-385 52-436 (452)
171 1cs1_A CGS, protein (cystathio 100.0 4.5E-27 1.6E-31 218.2 30.3 285 50-384 52-384 (386)
172 3qhx_A Cystathionine gamma-syn 100.0 1.3E-27 4.3E-32 222.0 26.5 284 50-380 66-391 (392)
173 3i5t_A Aminotransferase; pyrid 100.0 4.7E-28 1.6E-32 230.3 24.0 329 26-385 71-456 (476)
174 3ecd_A Serine hydroxymethyltra 100.0 5E-27 1.7E-31 220.7 30.6 323 26-383 44-397 (425)
175 3ri6_A O-acetylhomoserine sulf 100.0 3E-27 1E-31 220.9 27.7 290 50-380 82-429 (430)
176 2epj_A Glutamate-1-semialdehyd 100.0 4.1E-28 1.4E-32 228.8 21.9 336 9-384 57-432 (434)
177 1qgn_A Protein (cystathionine 100.0 6.4E-27 2.2E-31 219.3 29.6 284 51-382 115-444 (445)
178 3acz_A Methionine gamma-lyase; 100.0 7.7E-27 2.6E-31 216.6 29.6 281 50-381 59-387 (389)
179 2cy8_A D-phgat, D-phenylglycin 100.0 1E-27 3.5E-32 227.2 23.8 332 9-385 58-437 (453)
180 3e9k_A Kynureninase; kynurenin 100.0 4.4E-28 1.5E-32 230.6 20.8 296 51-385 112-463 (465)
181 1wyu_B Glycine dehydrogenase s 100.0 1.6E-27 5.4E-32 226.9 24.5 322 26-382 78-440 (474)
182 3fq8_A Glutamate-1-semialdehyd 100.0 4.1E-28 1.4E-32 228.3 20.2 323 26-382 69-426 (427)
183 3hmu_A Aminotransferase, class 100.0 1.2E-27 4.1E-32 227.1 23.5 330 26-384 72-453 (472)
184 3dr4_A Putative perosamine syn 100.0 2.4E-27 8.3E-32 220.5 24.5 323 10-380 24-390 (391)
185 3hbx_A GAD 1, glutamate decarb 100.0 9.8E-27 3.3E-31 222.6 28.7 341 24-385 66-446 (502)
186 2e7u_A Glutamate-1-semialdehyd 100.0 2E-27 6.9E-32 223.3 23.0 331 9-379 53-423 (424)
187 2fyf_A PSAT, phosphoserine ami 100.0 4E-27 1.4E-31 219.5 24.4 314 24-382 49-397 (398)
188 1pff_A Methionine gamma-lyase; 100.0 2E-26 6.9E-31 209.3 28.0 278 54-378 2-329 (331)
189 3h7f_A Serine hydroxymethyltra 100.0 4.7E-27 1.6E-31 222.1 24.7 328 26-383 57-414 (447)
190 2cjg_A L-lysine-epsilon aminot 100.0 1.3E-27 4.5E-32 226.0 20.1 317 26-383 71-448 (449)
191 1n8p_A Cystathionine gamma-lya 100.0 7.9E-27 2.7E-31 216.6 24.5 212 50-303 55-276 (393)
192 3frk_A QDTB; aminotransferase, 100.0 4.3E-27 1.5E-31 217.4 22.6 313 25-383 14-368 (373)
193 2fq6_A Cystathionine beta-lyas 100.0 7E-26 2.4E-30 210.9 30.4 214 50-304 82-303 (415)
194 3cog_A Cystathionine gamma-lya 100.0 5.9E-26 2E-30 211.4 29.7 283 50-384 67-399 (403)
195 2vi8_A Serine hydroxymethyltra 100.0 5E-27 1.7E-31 219.3 22.2 320 27-384 36-388 (405)
196 4e77_A Glutamate-1-semialdehyd 100.0 3.5E-27 1.2E-31 222.0 21.1 327 26-382 70-428 (429)
197 2okj_A Glutamate decarboxylase 100.0 7.3E-26 2.5E-30 217.2 30.5 330 32-383 111-502 (504)
198 3gbx_A Serine hydroxymethyltra 100.0 9.7E-27 3.3E-31 218.4 23.9 329 26-383 42-396 (420)
199 2oqx_A Tryptophanase; lyase, p 100.0 2.5E-27 8.7E-32 225.5 19.4 329 28-384 53-443 (467)
200 3ke3_A Putative serine-pyruvat 100.0 3.7E-27 1.3E-31 218.2 19.6 300 54-385 35-378 (379)
201 3nyt_A Aminotransferase WBPE; 100.0 1.8E-26 6.2E-31 212.7 24.0 304 25-378 13-359 (367)
202 2qma_A Diaminobutyrate-pyruvat 99.9 1.1E-25 3.6E-30 215.7 28.7 337 24-383 110-496 (497)
203 3ju7_A Putative PLP-dependent 99.9 2.3E-26 8E-31 212.2 23.0 318 20-383 8-375 (377)
204 1js3_A DDC;, DOPA decarboxylas 99.9 5.1E-26 1.7E-30 217.4 26.1 333 27-385 87-476 (486)
205 3vp6_A Glutamate decarboxylase 99.9 2.5E-25 8.7E-30 213.1 29.4 336 28-383 110-505 (511)
206 1o69_A Aminotransferase; struc 99.9 3.1E-25 1.1E-29 206.4 28.8 312 26-382 10-386 (394)
207 3nmy_A Xometc, cystathionine g 99.9 1.5E-25 5.2E-30 207.9 25.0 285 51-381 68-397 (400)
208 2a7v_A Serine hydroxymethyltra 99.9 4.3E-25 1.5E-29 208.4 26.8 334 25-382 65-440 (490)
209 3k40_A Aromatic-L-amino-acid d 99.9 9.4E-25 3.2E-29 207.4 26.5 342 28-387 88-475 (475)
210 2jis_A Cysteine sulfinic acid 99.9 6.6E-24 2.3E-28 204.0 31.8 334 26-382 120-514 (515)
211 4e1o_A HDC, histidine decarbox 99.9 1.3E-24 4.4E-29 207.0 25.7 332 27-385 92-480 (481)
212 2ctz_A O-acetyl-L-homoserine s 99.9 5.4E-24 1.9E-28 199.4 28.1 291 51-380 59-420 (421)
213 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.4E-23 4.7E-28 197.9 30.5 311 25-381 40-434 (437)
214 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.1E-25 3.9E-30 212.1 15.7 286 51-383 58-353 (446)
215 1wyu_A Glycine dehydrogenase ( 99.9 1.1E-23 3.9E-28 198.5 26.7 313 23-380 75-437 (438)
216 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.1E-24 7.1E-29 204.3 20.3 298 53-380 132-455 (456)
217 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.9E-22 6.4E-27 187.4 30.0 307 25-376 12-389 (390)
218 3jzl_A Putative cystathionine 99.9 6.7E-23 2.3E-27 189.9 25.3 241 28-305 32-304 (409)
219 3e77_A Phosphoserine aminotran 99.9 5.9E-23 2E-27 187.4 23.6 327 23-383 21-375 (377)
220 3hvy_A Cystathionine beta-lyas 99.9 9.2E-23 3.2E-27 189.6 24.8 240 28-305 47-321 (427)
221 1ohv_A 4-aminobutyrate aminotr 99.9 1.4E-23 4.7E-28 199.3 19.6 338 9-383 64-471 (472)
222 2yky_A Beta-transaminase; tran 99.9 1.9E-26 6.6E-31 216.4 0.0 318 26-384 117-461 (465)
223 3i16_A Aluminum resistance pro 99.9 1.4E-22 4.7E-27 188.4 25.3 255 28-321 46-340 (427)
224 1c4k_A Protein (ornithine deca 99.9 3.3E-22 1.1E-26 196.9 26.8 311 50-384 173-567 (730)
225 3qm2_A Phosphoserine aminotran 99.9 8.7E-23 3E-27 187.4 20.6 323 24-383 36-385 (386)
226 3m5u_A Phosphoserine aminotran 99.9 3.3E-22 1.1E-26 181.9 22.5 322 9-383 5-360 (361)
227 3ht4_A Aluminum resistance pro 99.9 6.1E-22 2.1E-26 185.0 23.9 226 56-305 67-310 (431)
228 2vyc_A Biodegradative arginine 99.9 4E-21 1.4E-25 190.9 27.2 306 52-383 207-605 (755)
229 4ao9_A Beta-phenylalanine amin 99.8 1.1E-18 3.9E-23 162.6 25.7 319 26-385 104-448 (454)
230 3n75_A LDC, lysine decarboxyla 99.8 1.3E-18 4.4E-23 170.0 25.7 228 50-301 195-442 (715)
231 4e3q_A Pyruvate transaminase; 99.8 1.6E-17 5.6E-22 156.0 25.7 349 9-385 68-470 (473)
232 4atq_A 4-aminobutyrate transam 99.8 2.6E-17 8.8E-22 154.1 24.3 336 26-383 81-455 (456)
233 3ou5_A Serine hydroxymethyltra 99.8 1.7E-16 5.9E-21 143.7 28.2 337 25-381 65-439 (490)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 3E-16 1E-20 142.8 24.6 307 59-386 122-464 (501)
235 4a0g_A Adenosylmethionine-8-am 99.7 1.7E-17 5.7E-22 166.1 16.2 330 27-383 399-828 (831)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 8.8E-16 3E-20 141.7 23.4 317 52-386 96-446 (450)
237 1ofu_X SULA, hypothetical prot 88.7 3.8 0.00013 29.9 9.0 103 75-184 6-113 (119)
238 1oft_A SULA, hypothetical prot 88.4 5.4 0.00018 30.8 10.0 103 75-184 48-155 (161)
239 3gh5_A HEX1, beta-hexosaminida 70.3 22 0.00076 33.4 9.4 110 71-186 128-274 (525)
240 3e2i_A Thymidine kinase; Zn-bi 68.1 11 0.00038 30.7 6.0 102 83-202 43-147 (219)
241 4fgs_A Probable dehydrogenase 65.7 19 0.00066 30.5 7.4 96 74-176 30-133 (273)
242 3rwb_A TPLDH, pyridoxal 4-dehy 61.0 35 0.0012 28.1 8.2 96 74-176 7-110 (247)
243 3tpc_A Short chain alcohol deh 59.8 48 0.0017 27.3 9.0 96 74-176 8-115 (257)
244 4g81_D Putative hexonate dehyd 58.4 55 0.0019 27.3 8.9 100 72-176 8-116 (255)
245 2gjx_A Beta-hexosaminidase alp 56.9 32 0.0011 32.2 7.8 27 160-186 207-233 (507)
246 4gkb_A 3-oxoacyl-[acyl-carrier 56.8 60 0.002 27.1 8.9 99 71-176 5-112 (258)
247 3m1a_A Putative dehydrogenase; 56.8 42 0.0014 28.2 8.2 94 75-175 7-108 (281)
248 4dqx_A Probable oxidoreductase 56.6 41 0.0014 28.3 8.0 97 73-176 27-131 (277)
249 3guy_A Short-chain dehydrogena 56.6 53 0.0018 26.5 8.5 95 75-176 3-102 (230)
250 3ged_A Short-chain dehydrogena 54.7 64 0.0022 26.8 8.6 94 75-176 4-105 (247)
251 3tsm_A IGPS, indole-3-glycerol 54.0 52 0.0018 27.8 8.0 50 133-188 127-176 (272)
252 3rd5_A Mypaa.01249.C; ssgcid, 53.9 25 0.00085 29.9 6.2 68 73-147 16-83 (291)
253 4e6p_A Probable sorbitol dehyd 53.0 47 0.0016 27.5 7.8 95 74-175 9-111 (259)
254 3tzq_B Short-chain type dehydr 52.1 81 0.0028 26.2 9.2 96 73-175 11-116 (271)
255 3mwd_B ATP-citrate synthase; A 51.6 28 0.00095 30.5 6.1 77 104-192 64-142 (334)
256 2yvq_A Carbamoyl-phosphate syn 51.2 74 0.0025 23.7 9.4 104 75-187 26-131 (143)
257 3gvc_A Oxidoreductase, probabl 51.2 45 0.0015 28.1 7.3 96 74-176 30-133 (277)
258 2o23_A HADH2 protein; HSD17B10 51.1 90 0.0031 25.6 9.3 66 74-146 13-78 (265)
259 4hp8_A 2-deoxy-D-gluconate 3-d 50.4 58 0.002 27.0 7.7 99 71-176 7-109 (247)
260 1i4n_A Indole-3-glycerol phosp 50.1 19 0.00066 30.1 4.6 51 133-189 108-158 (251)
261 3h7a_A Short chain dehydrogena 50.1 86 0.0029 25.8 8.9 97 73-175 7-112 (252)
262 4a29_A Engineered retro-aldol 49.4 13 0.00046 31.0 3.5 78 100-187 82-159 (258)
263 3grp_A 3-oxoacyl-(acyl carrier 48.9 48 0.0016 27.7 7.1 96 73-175 27-130 (266)
264 3ppi_A 3-hydroxyacyl-COA dehyd 48.8 49 0.0017 27.7 7.3 65 74-145 31-95 (281)
265 2yv2_A Succinyl-COA synthetase 48.1 26 0.00089 30.1 5.3 50 137-192 84-133 (297)
266 4eso_A Putative oxidoreductase 47.9 59 0.002 26.9 7.5 96 73-176 8-112 (255)
267 3ecs_A Translation initiation 47.3 98 0.0034 26.8 8.8 105 72-187 120-229 (315)
268 2q5c_A NTRC family transcripti 47.1 67 0.0023 25.5 7.3 71 78-159 34-105 (196)
269 2qlc_A DNA repair protein RADC 46.9 36 0.0012 24.9 5.2 48 136-184 54-106 (126)
270 1jak_A Beta-N-acetylhexosamini 46.9 30 0.001 32.4 5.9 25 162-186 225-249 (512)
271 2j9r_A Thymidine kinase; TK1, 46.2 47 0.0016 26.9 6.3 102 83-202 43-147 (214)
272 3op4_A 3-oxoacyl-[acyl-carrier 46.2 62 0.0021 26.5 7.4 95 74-175 10-112 (248)
273 2nu8_A Succinyl-COA ligase [AD 46.0 21 0.00071 30.6 4.4 49 137-191 77-125 (288)
274 3l6e_A Oxidoreductase, short-c 45.9 60 0.002 26.4 7.2 95 75-176 5-107 (235)
275 1hdc_A 3-alpha, 20 beta-hydrox 45.9 1.1E+02 0.0037 25.1 8.9 95 74-175 6-108 (254)
276 2ew8_A (S)-1-phenylethanol deh 45.8 1.2E+02 0.0041 24.7 9.4 95 74-175 8-111 (249)
277 1now_A Beta-hexosaminidase bet 45.7 63 0.0022 30.2 7.9 25 162-186 214-238 (507)
278 3n74_A 3-ketoacyl-(acyl-carrie 45.1 76 0.0026 26.1 7.8 95 74-175 10-113 (261)
279 3ak4_A NADH-dependent quinucli 43.7 1.3E+02 0.0046 24.6 9.2 95 74-175 13-115 (263)
280 1oi7_A Succinyl-COA synthetase 43.1 23 0.0008 30.3 4.2 49 138-192 78-126 (288)
281 2yv1_A Succinyl-COA ligase [AD 42.8 17 0.0006 31.2 3.4 49 138-192 84-132 (294)
282 3pxx_A Carveol dehydrogenase; 42.1 57 0.002 27.3 6.7 96 74-176 11-127 (287)
283 1bqc_A Protein (beta-mannanase 41.9 47 0.0016 28.3 6.1 23 166-188 63-85 (302)
284 1x1t_A D(-)-3-hydroxybutyrate 41.6 1.4E+02 0.0049 24.4 9.0 96 75-175 6-112 (260)
285 1hxh_A 3BETA/17BETA-hydroxyste 41.6 1.3E+02 0.0043 24.7 8.6 95 74-175 7-109 (253)
286 4b79_A PA4098, probable short- 41.3 1E+02 0.0036 25.4 7.8 91 75-176 13-106 (242)
287 1nff_A Putative oxidoreductase 40.3 1.4E+02 0.0048 24.5 8.8 95 74-175 8-110 (260)
288 4ibo_A Gluconate dehydrogenase 40.3 1.2E+02 0.0041 25.2 8.4 100 72-176 25-133 (271)
289 4fn4_A Short chain dehydrogena 40.2 1.1E+02 0.0036 25.5 7.8 96 74-176 8-115 (254)
290 3gem_A Short chain dehydrogena 40.0 98 0.0034 25.6 7.7 44 72-115 26-69 (260)
291 2fp4_A Succinyl-COA ligase [GD 39.5 20 0.0007 30.9 3.3 50 138-193 85-135 (305)
292 4dyv_A Short-chain dehydrogena 39.4 94 0.0032 25.9 7.5 95 75-176 30-133 (272)
293 2pnf_A 3-oxoacyl-[acyl-carrier 39.3 1.3E+02 0.0045 24.2 8.4 98 73-175 7-114 (248)
294 3ai3_A NADPH-sorbose reductase 38.5 1.4E+02 0.0047 24.5 8.4 31 74-104 8-38 (263)
295 4fc7_A Peroxisomal 2,4-dienoyl 38.3 1.3E+02 0.0045 25.0 8.4 98 74-176 28-135 (277)
296 3r1i_A Short-chain type dehydr 38.0 1.7E+02 0.006 24.3 9.3 100 72-176 31-139 (276)
297 3rjz_A N-type ATP pyrophosphat 38.0 1.6E+02 0.0054 24.2 8.3 99 75-185 7-120 (237)
298 3t7c_A Carveol dehydrogenase; 38.0 1.8E+02 0.0062 24.5 9.3 32 73-104 28-59 (299)
299 3f9i_A 3-oxoacyl-[acyl-carrier 37.6 66 0.0023 26.2 6.2 76 72-154 13-90 (249)
300 2d59_A Hypothetical protein PH 37.5 1.1E+02 0.0036 22.8 6.8 43 139-191 92-134 (144)
301 3uve_A Carveol dehydrogenase ( 37.4 1.2E+02 0.004 25.4 7.9 31 73-103 11-41 (286)
302 1vl8_A Gluconate 5-dehydrogena 37.4 1.4E+02 0.0047 24.7 8.3 98 74-176 22-129 (267)
303 4gqr_A Pancreatic alpha-amylas 37.2 22 0.00077 32.7 3.5 29 166-194 75-103 (496)
304 3bzy_B ESCU; auto cleavage pro 36.5 21 0.00073 24.0 2.3 22 170-191 29-50 (83)
305 3rih_A Short chain dehydrogena 36.4 1.9E+02 0.0066 24.3 9.2 99 73-176 41-149 (293)
306 3l77_A Short-chain alcohol deh 36.4 1.3E+02 0.0046 24.0 7.9 97 75-176 4-110 (235)
307 3lyl_A 3-oxoacyl-(acyl-carrier 35.9 1.3E+02 0.0046 24.3 7.9 95 74-175 6-111 (247)
308 1uls_A Putative 3-oxoacyl-acyl 35.6 1.8E+02 0.006 23.6 9.0 94 74-176 6-107 (245)
309 1vb5_A Translation initiation 35.5 1.3E+02 0.0043 25.5 7.6 118 54-186 94-216 (276)
310 1xx6_A Thymidine kinase; NESG, 35.5 1E+02 0.0034 24.3 6.6 103 83-202 22-127 (191)
311 2yl5_A Beta-N-acetylhexosamini 35.3 31 0.0011 31.6 4.0 28 159-186 86-113 (442)
312 1pii_A N-(5'phosphoribosyl)ant 35.1 41 0.0014 30.9 4.7 50 132-187 114-163 (452)
313 2a4k_A 3-oxoacyl-[acyl carrier 35.0 1.4E+02 0.0049 24.5 8.0 66 74-146 7-72 (263)
314 2b8t_A Thymidine kinase; deoxy 34.9 83 0.0028 25.6 6.2 95 83-192 26-127 (223)
315 3o63_A Probable thiamine-phosp 34.7 39 0.0013 28.1 4.1 52 138-190 46-105 (243)
316 1c7s_A Beta-N-acetylhexosamini 34.6 88 0.003 31.3 7.2 27 160-186 392-418 (858)
317 2jah_A Clavulanic acid dehydro 34.4 1.5E+02 0.0053 24.0 8.0 97 74-175 8-113 (247)
318 3pff_A ATP-citrate synthase; p 34.3 62 0.0021 32.3 6.1 77 104-192 550-628 (829)
319 1hjs_A Beta-1,4-galactanase; 4 34.0 1.4E+02 0.0048 25.9 7.9 55 136-192 30-84 (332)
320 3tfo_A Putative 3-oxoacyl-(acy 33.9 1.5E+02 0.0051 24.5 7.9 97 75-176 6-111 (264)
321 3tjr_A Short chain dehydrogena 33.9 1.5E+02 0.0052 25.0 8.1 97 74-175 32-137 (301)
322 3gaf_A 7-alpha-hydroxysteroid 33.9 1.3E+02 0.0043 24.7 7.4 96 73-175 12-117 (256)
323 1geg_A Acetoin reductase; SDR 33.9 1.4E+02 0.0047 24.4 7.6 96 75-175 4-108 (256)
324 3sju_A Keto reductase; short-c 33.5 1.4E+02 0.0048 24.9 7.7 95 75-176 26-131 (279)
325 3rkr_A Short chain oxidoreduct 33.4 1.7E+02 0.0058 24.0 8.2 97 74-175 30-136 (262)
326 4dmm_A 3-oxoacyl-[acyl-carrier 33.3 1.2E+02 0.0041 25.2 7.2 98 72-176 27-136 (269)
327 3qlj_A Short chain dehydrogena 33.3 1.5E+02 0.0052 25.3 8.1 31 74-104 28-58 (322)
328 2cfc_A 2-(R)-hydroxypropyl-COM 33.1 1.3E+02 0.0043 24.4 7.3 67 75-146 4-72 (250)
329 3qja_A IGPS, indole-3-glycerol 32.8 79 0.0027 26.7 5.8 49 133-187 120-168 (272)
330 3nyw_A Putative oxidoreductase 32.4 1E+02 0.0035 25.2 6.6 33 74-106 8-40 (250)
331 2wsb_A Galactitol dehydrogenas 32.4 1.6E+02 0.0054 23.9 7.8 96 73-175 11-114 (254)
332 1zk4_A R-specific alcohol dehy 32.0 1.8E+02 0.0061 23.5 8.0 31 74-104 7-37 (251)
333 3sx2_A Putative 3-ketoacyl-(ac 31.9 1.7E+02 0.0057 24.2 8.0 31 74-104 14-44 (278)
334 3tsc_A Putative oxidoreductase 31.6 1.4E+02 0.0047 24.9 7.3 31 73-103 11-41 (277)
335 2yl6_A Beta-N-acetylhexosamini 31.6 31 0.0011 31.5 3.3 27 160-186 84-110 (434)
336 3awd_A GOX2181, putative polyo 31.6 1.9E+02 0.0064 23.5 8.1 77 73-156 13-98 (260)
337 3pgx_A Carveol dehydrogenase; 31.5 1.5E+02 0.0053 24.6 7.7 32 73-104 15-46 (280)
338 2ae2_A Protein (tropinone redu 31.3 2.1E+02 0.0071 23.4 8.4 97 74-175 10-116 (260)
339 2rhc_B Actinorhodin polyketide 31.2 1.7E+02 0.0059 24.2 7.9 97 74-175 23-128 (277)
340 3s55_A Putative short-chain de 31.1 2.3E+02 0.0077 23.5 8.9 31 74-104 11-41 (281)
341 1fmc_A 7 alpha-hydroxysteroid 31.0 2.1E+02 0.0071 23.1 8.6 98 73-175 11-116 (255)
342 3ozo_A N-acetylglucosaminidase 31.0 53 0.0018 31.2 4.8 25 162-186 250-274 (572)
343 2es9_A Putative cytoplasmic pr 30.9 3.5 0.00012 28.0 -2.3 82 28-111 10-98 (115)
344 3qfe_A Putative dihydrodipicol 30.8 2.6E+02 0.0088 24.1 9.3 53 53-108 63-118 (318)
345 3v2h_A D-beta-hydroxybutyrate 30.8 2.1E+02 0.0071 23.8 8.4 98 74-176 26-134 (281)
346 4imr_A 3-oxoacyl-(acyl-carrier 30.7 2.3E+02 0.0079 23.5 8.8 99 72-175 32-138 (275)
347 3io5_A Recombination and repai 30.6 1.5E+02 0.0052 25.8 7.3 101 83-189 43-171 (333)
348 1g94_A Alpha-amylase; beta-alp 30.5 33 0.0011 31.4 3.3 28 167-194 64-91 (448)
349 3a28_C L-2.3-butanediol dehydr 30.3 1.5E+02 0.0052 24.2 7.3 94 75-175 4-110 (258)
350 3v7e_A Ribosome-associated pro 30.3 1.2E+02 0.0041 20.0 5.5 48 138-192 16-64 (82)
351 2vt1_B Surface presentation of 30.3 30 0.001 23.8 2.3 22 170-191 29-50 (93)
352 1iuk_A Hypothetical protein TT 30.2 58 0.002 24.2 4.1 42 140-191 86-127 (140)
353 4egf_A L-xylulose reductase; s 30.2 1.9E+02 0.0067 23.7 8.0 98 74-176 21-128 (266)
354 3e48_A Putative nucleoside-dip 30.1 1.7E+02 0.0057 24.3 7.7 93 76-182 3-98 (289)
355 2c07_A 3-oxoacyl-(acyl-carrier 29.9 2.4E+02 0.0082 23.4 8.8 95 74-175 45-150 (285)
356 3lkv_A Uncharacterized conserv 29.7 2.5E+02 0.0086 23.6 9.2 145 24-189 19-177 (302)
357 3zu3_A Putative reductase YPO4 29.6 3.1E+02 0.011 24.6 10.9 54 50-103 24-78 (405)
358 1fob_A Beta-1,4-galactanase; B 29.6 1.7E+02 0.0059 25.3 7.7 55 136-192 30-84 (334)
359 3ruf_A WBGU; rossmann fold, UD 29.5 2.4E+02 0.0082 24.1 8.8 103 72-182 24-143 (351)
360 3is3_A 17BETA-hydroxysteroid d 29.5 1.3E+02 0.0043 25.0 6.7 96 74-176 19-126 (270)
361 1wjw_A Phosphoacetylglucosamin 29.5 1.3E+02 0.0045 21.2 5.8 40 343-385 58-98 (112)
362 2zcu_A Uncharacterized oxidore 29.4 2.2E+02 0.0076 23.3 8.4 93 76-182 2-96 (286)
363 4exb_A Putative uncharacterize 29.2 1.9E+02 0.0064 24.5 7.7 143 26-189 68-237 (292)
364 3imf_A Short chain dehydrogena 29.0 2.3E+02 0.008 23.0 9.2 98 74-176 7-113 (257)
365 1iy8_A Levodione reductase; ox 28.8 2.1E+02 0.0073 23.4 8.0 31 74-104 14-44 (267)
366 3t7y_A YOP proteins translocat 28.6 29 0.00099 24.1 2.0 22 170-191 44-65 (97)
367 1x7f_A Outer surface protein; 28.6 78 0.0027 28.3 5.2 28 167-194 73-100 (385)
368 2z1n_A Dehydrogenase; reductas 28.5 2.4E+02 0.0082 23.0 8.7 31 74-104 8-38 (260)
369 2uvd_A 3-oxoacyl-(acyl-carrier 28.4 2.3E+02 0.0077 22.9 8.0 96 75-175 6-111 (246)
370 3ucx_A Short chain dehydrogena 28.3 2E+02 0.0067 23.7 7.7 99 73-176 11-119 (264)
371 3sc4_A Short chain dehydrogena 28.3 2.6E+02 0.0088 23.3 9.5 97 73-176 9-123 (285)
372 3l5o_A Uncharacterized protein 28.3 93 0.0032 26.2 5.4 73 96-180 140-212 (270)
373 1ae1_A Tropinone reductase-I; 28.3 2.5E+02 0.0086 23.1 8.5 97 74-175 22-128 (273)
374 1ht6_A AMY1, alpha-amylase iso 27.8 46 0.0016 29.9 3.8 28 167-194 68-95 (405)
375 3ftp_A 3-oxoacyl-[acyl-carrier 27.7 2.4E+02 0.0082 23.3 8.2 98 74-176 29-135 (270)
376 3tl3_A Short-chain type dehydr 27.7 1.1E+02 0.0037 25.1 5.9 62 74-145 10-71 (257)
377 1lwj_A 4-alpha-glucanotransfer 27.6 52 0.0018 29.9 4.1 28 167-194 69-96 (441)
378 3bk2_A RNAse J, metal dependen 27.5 1.7E+02 0.0057 27.7 7.8 77 95-182 337-423 (562)
379 3qiv_A Short-chain dehydrogena 27.5 2.4E+02 0.0083 22.7 8.2 68 73-145 9-77 (253)
380 3c01_E Surface presentation of 27.4 31 0.0011 24.0 2.0 22 170-191 29-50 (98)
381 3cxt_A Dehydrogenase with diff 27.4 2.1E+02 0.0072 24.0 7.8 98 73-175 34-140 (291)
382 1mxg_A Alpha amylase; hyperthe 27.2 48 0.0016 30.2 3.8 28 167-194 86-113 (435)
383 2ya0_A Putative alkaline amylo 27.1 41 0.0014 33.0 3.5 28 167-194 254-281 (714)
384 2pju_A Propionate catabolism o 27.0 2.5E+02 0.0086 22.7 9.6 50 75-128 40-90 (225)
385 2gjh_A Designed protein; oblig 26.9 99 0.0034 18.0 4.5 28 356-383 2-30 (62)
386 1y81_A Conserved hypothetical 26.9 1.6E+02 0.0055 21.6 6.1 42 140-191 85-126 (138)
387 1ud2_A Amylase, alpha-amylase; 26.9 43 0.0015 30.9 3.5 27 167-193 80-106 (480)
388 1tks_A 3,4-dihydroxy-2-butanon 26.8 98 0.0033 24.8 5.0 36 148-186 159-194 (204)
389 3ijr_A Oxidoreductase, short c 26.7 2.8E+02 0.0096 23.2 9.8 96 74-176 48-156 (291)
390 2e8y_A AMYX protein, pullulana 26.6 31 0.0011 33.9 2.5 28 167-194 315-342 (718)
391 1hvx_A Alpha-amylase; hydrolas 26.5 44 0.0015 31.2 3.5 28 167-194 81-108 (515)
392 3bh4_A Alpha-amylase; calcium, 26.4 44 0.0015 30.9 3.5 27 167-193 78-104 (483)
393 1gcy_A Glucan 1,4-alpha-maltot 26.3 57 0.002 30.6 4.3 28 167-194 92-119 (527)
394 1spx_A Short-chain reductase f 26.3 1.6E+02 0.0055 24.3 6.8 30 75-104 8-37 (278)
395 3kvo_A Hydroxysteroid dehydrog 26.2 3.2E+02 0.011 23.7 10.4 95 74-175 46-158 (346)
396 3nl6_A Thiamine biosynthetic b 26.2 84 0.0029 29.6 5.3 49 138-188 28-76 (540)
397 3oec_A Carveol dehydrogenase ( 25.9 3E+02 0.01 23.3 8.8 30 74-103 47-76 (317)
398 3flu_A DHDPS, dihydrodipicolin 25.9 1.9E+02 0.0065 24.6 7.2 71 116-186 5-81 (297)
399 1wpc_A Glucan 1,4-alpha-maltoh 25.8 46 0.0016 30.8 3.5 27 167-193 82-108 (485)
400 1w6u_A 2,4-dienoyl-COA reducta 25.8 2.4E+02 0.0083 23.5 8.0 32 74-105 27-58 (302)
401 2guy_A Alpha-amylase A; (beta- 25.7 52 0.0018 30.3 3.8 28 167-194 97-124 (478)
402 1pq4_A Periplasmic binding pro 25.7 1.5E+02 0.0052 25.1 6.5 54 96-158 189-246 (291)
403 2yxb_A Coenzyme B12-dependent 25.6 1.1E+02 0.0039 23.2 5.2 58 111-181 39-97 (161)
404 3edm_A Short chain dehydrogena 25.5 2.7E+02 0.0094 22.7 9.2 96 73-176 8-117 (259)
405 3v8b_A Putative dehydrogenase, 25.3 2.9E+02 0.01 22.9 8.7 98 74-176 29-136 (283)
406 1xq1_A Putative tropinone redu 25.3 2.6E+02 0.0089 22.7 8.0 97 74-175 15-121 (266)
407 1yxm_A Pecra, peroxisomal tran 25.2 3E+02 0.01 23.0 8.8 31 74-104 19-49 (303)
408 3l21_A DHDPS, dihydrodipicolin 25.2 1.8E+02 0.0061 24.9 6.9 64 123-186 20-89 (304)
409 2aaa_A Alpha-amylase; glycosid 25.0 62 0.0021 29.9 4.2 28 167-194 97-124 (484)
410 1vhx_A Putative holliday junct 25.0 1.7E+02 0.006 21.9 6.0 59 134-192 40-102 (150)
411 3dmy_A Protein FDRA; predicted 25.0 96 0.0033 28.7 5.3 73 104-189 21-94 (480)
412 1yb1_A 17-beta-hydroxysteroid 24.9 2E+02 0.0069 23.7 7.2 32 73-104 31-62 (272)
413 3ezl_A Acetoacetyl-COA reducta 24.9 2.6E+02 0.0088 22.6 7.8 95 74-175 14-120 (256)
414 2z1k_A (NEO)pullulanase; hydro 24.8 55 0.0019 30.1 3.8 28 167-194 96-123 (475)
415 3dii_A Short-chain dehydrogena 24.8 2.8E+02 0.0094 22.4 8.5 94 75-176 4-105 (247)
416 3v2g_A 3-oxoacyl-[acyl-carrier 24.7 3E+02 0.01 22.7 8.7 98 72-176 30-139 (271)
417 3gdg_A Probable NADP-dependent 24.6 2.1E+02 0.0072 23.4 7.3 97 72-175 19-130 (267)
418 1xkq_A Short-chain reductase f 24.5 2.6E+02 0.009 23.1 7.9 31 74-104 7-37 (280)
419 3ry0_A Putative tautomerase; o 24.5 1.3E+02 0.0044 18.5 4.7 29 357-385 2-32 (65)
420 4aie_A Glucan 1,6-alpha-glucos 24.5 49 0.0017 31.0 3.5 28 166-193 78-105 (549)
421 1edo_A Beta-keto acyl carrier 24.5 2.7E+02 0.0092 22.2 8.0 96 75-175 3-108 (244)
422 1wzu_A Quinolinate synthetase 24.5 61 0.0021 27.8 3.6 78 75-160 121-200 (300)
423 1wza_A Alpha-amylase A; hydrol 24.5 59 0.002 30.1 3.9 27 167-193 81-107 (488)
424 3asu_A Short-chain dehydrogena 24.4 1.9E+02 0.0067 23.4 6.9 92 76-175 3-104 (248)
425 1xp8_A RECA protein, recombina 24.4 2.5E+02 0.0084 24.8 7.8 18 337-354 292-309 (366)
426 2kfp_A Pspto_3016 protein; alp 24.4 99 0.0034 22.4 4.4 39 335-375 71-111 (125)
427 3ff4_A Uncharacterized protein 24.4 1.2E+02 0.0041 21.9 4.8 39 138-186 72-110 (122)
428 1ua7_A Alpha-amylase; beta-alp 24.3 55 0.0019 29.6 3.6 29 166-194 73-101 (422)
429 3u9l_A 3-oxoacyl-[acyl-carrier 24.3 2.9E+02 0.0098 23.7 8.2 29 75-103 7-35 (324)
430 1yht_A DSPB; beta barrel, hydr 24.2 55 0.0019 29.1 3.5 66 118-186 44-113 (367)
431 3afn_B Carbonyl reductase; alp 24.2 2.8E+02 0.0095 22.3 8.8 97 74-175 8-115 (258)
432 3qvo_A NMRA family protein; st 24.2 2.3E+02 0.008 22.6 7.3 91 75-181 25-116 (236)
433 2v9d_A YAGE; dihydrodipicolini 23.9 3.6E+02 0.012 23.5 9.4 51 54-108 84-138 (343)
434 1jae_A Alpha-amylase; glycosid 23.9 45 0.0015 30.8 3.0 28 167-194 74-101 (471)
435 3o38_A Short chain dehydrogena 23.8 2.2E+02 0.0077 23.2 7.2 99 73-176 22-131 (266)
436 3cpr_A Dihydrodipicolinate syn 23.7 2.2E+02 0.0074 24.4 7.1 53 132-185 30-89 (304)
437 3pk0_A Short-chain dehydrogena 23.6 3E+02 0.01 22.4 8.9 98 73-175 10-117 (262)
438 3tha_A Tryptophan synthase alp 23.5 2.3E+02 0.0079 23.5 6.9 94 86-186 105-204 (252)
439 3dhu_A Alpha-amylase; structur 23.5 55 0.0019 29.9 3.5 29 166-194 82-110 (449)
440 1xhl_A Short-chain dehydrogena 23.3 2.7E+02 0.0092 23.4 7.8 31 74-104 27-57 (297)
441 2b4q_A Rhamnolipids biosynthes 23.3 2.7E+02 0.0093 23.0 7.7 32 74-105 30-61 (276)
442 1xky_A Dihydrodipicolinate syn 23.3 2.5E+02 0.0084 23.9 7.4 53 132-185 26-85 (301)
443 1wzl_A Alpha-amylase II; pullu 23.2 58 0.002 31.0 3.7 29 166-194 218-246 (585)
444 2orv_A Thymidine kinase; TP4A 23.1 3.1E+02 0.011 22.4 9.4 102 83-205 34-138 (234)
445 3dm5_A SRP54, signal recogniti 23.0 2.4E+02 0.0082 25.7 7.5 101 83-191 114-225 (443)
446 2ehd_A Oxidoreductase, oxidore 23.0 2.8E+02 0.0097 21.9 7.9 30 75-104 7-36 (234)
447 3rcn_A Beta-N-acetylhexosamini 22.9 64 0.0022 30.4 3.8 114 70-186 83-242 (543)
448 3m5v_A DHDPS, dihydrodipicolin 22.9 1.4E+02 0.0047 25.6 5.7 54 132-186 21-82 (301)
449 1j0h_A Neopullulanase; beta-al 22.8 62 0.0021 30.8 3.8 29 166-194 221-249 (588)
450 2dh2_A 4F2 cell-surface antige 22.7 67 0.0023 29.1 3.9 28 167-194 81-108 (424)
451 2bgk_A Rhizome secoisolaricire 22.6 3.2E+02 0.011 22.3 8.0 31 74-104 17-47 (278)
452 2ki0_A DS119; beta-alpha-beta, 22.6 55 0.0019 16.9 1.8 19 166-184 13-31 (36)
453 3i6i_A Putative leucoanthocyan 22.6 1.2E+02 0.0041 26.2 5.5 97 74-186 11-116 (346)
454 3daq_A DHDPS, dihydrodipicolin 22.5 1.8E+02 0.0063 24.6 6.4 52 54-109 55-110 (292)
455 3mfq_A TROA, high-affinity zin 22.3 66 0.0023 27.3 3.5 75 98-185 164-242 (282)
456 2ohw_A YUEI protein; structura 22.2 1.8E+02 0.0062 21.4 5.4 44 139-188 53-97 (133)
457 2whl_A Beta-mannanase, baman5; 22.2 60 0.002 27.5 3.3 24 166-189 62-85 (294)
458 3enk_A UDP-glucose 4-epimerase 22.1 2.7E+02 0.0091 23.6 7.6 103 75-182 7-121 (341)
459 3hr8_A Protein RECA; alpha and 22.0 1.3E+02 0.0046 26.4 5.5 17 170-186 177-193 (356)
460 3t4x_A Oxidoreductase, short c 22.0 3.3E+02 0.011 22.3 8.4 98 73-175 10-114 (267)
461 1iv0_A Hypothetical protein; r 22.0 97 0.0033 21.4 3.7 57 135-191 37-96 (98)
462 3eb2_A Putative dihydrodipicol 21.8 3.4E+02 0.012 23.0 8.0 54 53-109 56-112 (300)
463 3a11_A Translation initiation 21.7 3.3E+02 0.011 23.7 7.9 97 72-187 140-249 (338)
464 2jl1_A Triphenylmethane reduct 21.6 3.3E+02 0.011 22.2 9.5 96 75-182 2-99 (287)
465 3m5v_A DHDPS, dihydrodipicolin 21.6 3.7E+02 0.013 22.8 8.3 53 53-109 59-116 (301)
466 3oid_A Enoyl-[acyl-carrier-pro 21.5 3.3E+02 0.011 22.2 9.1 95 75-176 6-112 (258)
467 2q2v_A Beta-D-hydroxybutyrate 21.5 3.2E+02 0.011 22.0 10.6 94 75-175 6-108 (255)
468 3v7q_A Probable ribosomal prot 21.5 1.4E+02 0.0047 20.6 4.5 43 138-187 24-67 (101)
469 2ioj_A Hypothetical protein AF 21.5 1.5E+02 0.0051 21.7 5.0 39 139-186 64-103 (139)
470 2wkj_A N-acetylneuraminate lya 21.4 2.3E+02 0.008 24.1 6.9 54 132-186 25-85 (303)
471 1o5k_A DHDPS, dihydrodipicolin 21.4 3.8E+02 0.013 22.8 9.1 53 53-109 64-120 (306)
472 2ya1_A Putative alkaline amylo 21.4 59 0.002 33.4 3.4 28 167-194 561-588 (1014)
473 3e03_A Short chain dehydrogena 21.3 3.4E+02 0.012 22.3 9.6 32 73-104 6-37 (274)
474 4f21_A Carboxylesterase/phosph 21.1 3.3E+02 0.011 22.0 9.3 126 50-179 108-242 (246)
475 3osu_A 3-oxoacyl-[acyl-carrier 21.1 3.3E+02 0.011 21.9 9.0 94 75-175 6-111 (246)
476 1yo6_A Putative carbonyl reduc 21.1 3.1E+02 0.011 21.7 10.0 94 75-175 5-111 (250)
477 1y80_A Predicted cobalamin bin 20.8 2.4E+02 0.0083 22.3 6.6 58 111-181 109-167 (210)
478 2yxg_A DHDPS, dihydrodipicolin 20.7 3.6E+02 0.012 22.6 7.9 52 53-108 52-107 (289)
479 3si9_A DHDPS, dihydrodipicolin 20.7 1.5E+02 0.0053 25.5 5.6 53 53-109 74-130 (315)
480 3kux_A Putative oxidoreductase 20.7 2.4E+02 0.0081 24.5 7.0 68 107-186 56-123 (352)
481 2p0o_A Hypothetical protein DU 20.7 41 0.0014 29.9 1.8 55 167-234 49-103 (372)
482 3pzt_A Endoglucanase; alpha/be 20.6 55 0.0019 28.4 2.7 23 167-189 104-126 (327)
483 3tox_A Short chain dehydrogena 20.6 3.7E+02 0.012 22.3 8.5 98 74-176 9-116 (280)
484 3dz1_A Dihydrodipicolinate syn 20.6 1.9E+02 0.0064 24.9 6.1 54 132-186 22-81 (313)
485 3sxp_A ADP-L-glycero-D-mannohe 20.6 4.1E+02 0.014 22.8 11.2 105 73-185 10-134 (362)
486 3p19_A BFPVVD8, putative blue 20.5 3.3E+02 0.011 22.4 7.6 31 74-104 17-47 (266)
487 3ohs_X Trans-1,2-dihydrobenzen 20.4 2.3E+02 0.0079 24.3 6.8 71 107-189 55-125 (334)
488 1nu0_A Hypothetical protein YQ 20.4 87 0.003 23.3 3.4 58 135-192 39-100 (138)
489 3jug_A Beta-mannanase; TIM-bar 20.4 68 0.0023 28.2 3.3 26 166-191 85-110 (345)
490 1ea9_C Cyclomaltodextrinase; h 20.3 68 0.0023 30.5 3.5 29 166-194 217-245 (583)
491 1b93_A Protein (methylglyoxal 20.3 1.6E+02 0.0056 22.2 4.9 95 84-190 24-122 (152)
492 3on1_A BH2414 protein; structu 20.3 1.4E+02 0.0047 20.6 4.3 42 138-186 23-65 (101)
493 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.2 3.3E+02 0.011 22.1 7.6 31 74-104 22-52 (274)
494 1m53_A Isomaltulose synthase; 20.2 76 0.0026 30.1 3.8 29 166-194 91-119 (570)
495 2bd0_A Sepiapterin reductase; 20.2 2.7E+02 0.0093 22.2 6.9 96 75-175 4-115 (244)
496 2x9g_A PTR1, pteridine reducta 20.2 2.5E+02 0.0085 23.3 6.8 31 74-104 24-54 (288)
497 3gi1_A LBP, laminin-binding pr 20.1 2.2E+02 0.0075 24.0 6.4 75 96-185 178-255 (286)
498 3j21_Z 50S ribosomal protein L 20.1 1.4E+02 0.0049 20.4 4.3 42 138-186 20-62 (99)
499 3cpq_A 50S ribosomal protein L 20.1 1.6E+02 0.0055 20.6 4.7 41 138-185 26-67 (110)
500 1zja_A Trehalulose synthase; s 20.1 77 0.0026 29.9 3.8 28 167-194 79-106 (557)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.7e-50 Score=379.58 Aligned_cols=372 Identities=37% Similarity=0.711 Sum_probs=320.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.|.....+++++.+.+++.+.+.......|++..+..++|+.+++++... +.++++++|++|+|+++|+..
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~ 133 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDL 133 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHH
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHH
Confidence 3577888887555568999999999999988765568988889999999999999765 556788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|.++...++ ..|.++..+++.++.++.+|+++++++++++++++++++|+||||..+|.+
T Consensus 134 ~~~~l~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~ 211 (427)
T 3dyd_A 134 CLAVLANPGQNILVPRPGFSLYKTLAE--SMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKR 211 (427)
T ss_dssp HHHHHCCTTCEEEEEESCCTHHHHHHH--HTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHH--HcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHH
Confidence 999999999999999999999999999 999999999987767788999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++|+++|+|++|+++.+++..+.++..+..+.++++++|+||.|+++|+|+||++++++.... .+++.+
T Consensus 212 ~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~ 290 (427)
T 3dyd_A 212 HLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRD 290 (427)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhh-HHHHHH
Confidence 9999999999999999999999999988877777777777677899999999999999999999998532111 124666
Q ss_pred HHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 249 SIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
.+.......++++++.+.++..+|+...+.++.++.++++++++.+.+.|+++|++. +..|.+|+|+|+.++....++.
T Consensus 291 ~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~ 369 (427)
T 3dyd_A 291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEF 369 (427)
T ss_dssp HHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTC
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCC
Confidence 666554345788999999999999865678889999999999999999999998888 4478999999998875433333
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++++
T Consensus 370 ~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~~ 426 (427)
T 3dyd_A 370 ENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHYH 426 (427)
T ss_dssp SSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHHHHHHhhc
Confidence 356788888887889999999999889999999999999999999999999988763
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=7.8e-49 Score=364.82 Aligned_cols=349 Identities=22% Similarity=0.386 Sum_probs=298.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
..++++.|.+ ++++++.+.+++.+.+... ..+|++..|..++|+.+++++...++..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~ 106 (385)
T 1b5p_A 32 DLVALTAGEP----DFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFN 106 (385)
T ss_dssp CCEECCCSSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHH
T ss_pred CEEEecCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHH
Confidence 3567777766 7788899999999988654 3478887789999999999999888877888999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|..+...++ ..|.+++.+++++++++.+|++++++++++++++|++++|+||||.++|.+
T Consensus 107 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~ 184 (385)
T 1b5p_A 107 LFQAILDPGDEVIVLSPYWVSYPEMVR--FAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKE 184 (385)
T ss_dssp HHHHHCCTTCEEEEEESCCTHHHHHHH--HTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHH--HcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHH
Confidence 999999999999999999999999999 999999999987556778999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++|+++|+|++|+.+.+++ ...++..+.. +++++++|+||.|+++|+|+||+++++ ++++
T Consensus 185 ~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~--------~~~~ 254 (385)
T 1b5p_A 185 VLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPK--------EVIK 254 (385)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCH--------HHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCH--------HHHH
Confidence 99999999999999999999999988876 4455555544 679999999999999999999999865 6888
Q ss_pred HHHhhhh-ccCCcchHHHHHHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 249 SIKGCLN-AASHPVTFIQAAVPRIVDET--NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
.+..... ...+++.+.|.++..+++.. ...++++..++++++++.+.+.|+++ ++. +..|.+++++|+.++...
T Consensus 255 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~- 331 (385)
T 1b5p_A 255 AMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLK-AVRPSGAFYVLMDTSPIA- 331 (385)
T ss_dssp HHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSBTTEEEEECTTTC-
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEecCCCC-
Confidence 7776543 34577888999888888641 24668888999999999999999988 787 447888889998885311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++...++ ++||.+.||..|+.++++||+++.+++++++++++|+++++
T Consensus 332 ---~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 332 ---PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp ---SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC-
T ss_pred ---CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 14667777776 77999999999877889999999889999999999987764
No 3
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.3e-48 Score=365.52 Aligned_cols=373 Identities=32% Similarity=0.585 Sum_probs=308.5
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhh------cCCCCCCCCCEEEcCC
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNR------DLPYKLSPEDVYLTLG 81 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~------~~~~~~~~~~i~~~~g 81 (387)
+.+++++.|.|..++++++++.+.+++.+.+.......|++..+..++|+.+++++.+ ..+.++++++|++|+|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g 112 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG 112 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence 4567888888866667899999999999998765455788777899999999999982 2455577899999999
Q ss_pred hHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 82 CSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|+++|+++++++++++++++|+|||
T Consensus 113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~npt 190 (416)
T 1bw0_A 113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCK--AYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPC 190 (416)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHH--HTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHH--HcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCC
Confidence 9999999999999999999999999999999999 99999999988655567789999999998889999999999999
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC----CCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST----PYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
|.++|.+++++|+++|+++|+++|+|++|+++.+++. ...++..+....++++++|+||.|+++|+|+||++++++
T Consensus 191 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 191 GSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCc
Confidence 9999999999999999999999999999999888775 455565555555789999999999999999999999763
Q ss_pred CCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 238 NGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
..+. ..+...++......++++++.+.++..+|+...+.++++..++++++++.+.+.|+++|++. +..|.+|+|+|
T Consensus 271 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~ 347 (416)
T 1bw0_A 271 HGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPRGAMYLM 347 (416)
T ss_dssp TCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEE
T ss_pred hhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEE
Confidence 1111 02333333322234578889999999988854567888999999999999999999988887 43677899999
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
++++....++..+..++...+++++||.+.||..|+.++++||+++.+++++++++++|.++++++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHBC
T ss_pred EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhc
Confidence 88864222111245677777777789999999988878899999998899999999999999987654
No 4
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=7.7e-47 Score=352.20 Aligned_cols=350 Identities=23% Similarity=0.358 Sum_probs=291.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++.|.+ ++++++.+.+++.+++... ..+|++..+..++|+.+++++.+.++.++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~ 105 (391)
T 3h14_A 31 RRIIHMEVGQP----GTGAPRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFL 105 (391)
T ss_dssp CCCEECCCSSC----SSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCeEEccCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHH
Confidence 35677878776 7888999999999998764 347888778999999999999988887888999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|.++...++ ..|.++..+++++++++.+|+++++++ ++++|++++|+||||.++|.
T Consensus 106 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~ 180 (391)
T 3h14_A 106 LAFTALFDSGDRVGIGAPGYPSYRQILR--ALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDH 180 (391)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHH--HTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHHHHH--HcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCH
Confidence 9999999999999999999999999999 999999999987666778899999887 78999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+|++|+++.+++... ++..+ .+++++++|+||.++++|+|+||+++++ +++
T Consensus 181 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~ 249 (391)
T 3h14_A 181 AAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMTGWRVGWMVVPE--------DQV 249 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCTTSCCEEEECCG--------GGH
T ss_pred HHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCccceeEEEEeCH--------HHH
Confidence 999999999999999999999999988876532 22222 3567999999999999999999999976 677
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+..... ...+++++.+.++.+++. .+.++++..++++++++.+.+.|++++ +..+..|.+++++|+.++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-- 324 (391)
T 3h14_A 250 RVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAG-FTRIAPPDGAFYVYADVSDLT-- 324 (391)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCBCCCCBTTEEEEECTTTC--
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcC-CCcccCCCeeEEEEEecCccC--
Confidence 77776643 456788889888888887 467889999999999999999999884 443447788899998886421
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++++..+
T Consensus 325 --~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 325 --DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQARGE 384 (391)
T ss_dssp --SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC--
T ss_pred --CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 25667888887778999999998876 5799999988999999999999999988765
No 5
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1e-46 Score=350.94 Aligned_cols=354 Identities=22% Similarity=0.409 Sum_probs=300.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++.+.+... ...|++..+..++|+.+++++.+.++..+++++|++|+|+++++..
T Consensus 31 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~ 105 (388)
T 1j32_A 31 DVCSFSAGEP----DFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFN 105 (388)
T ss_dssp CCEECCCSSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred CEEECCCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHH
Confidence 3567777766 6778899999999988654 3478887789999999999998877777788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++++++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|+++|++++++++++|++++|+||||.++|.+
T Consensus 106 ~~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 183 (388)
T 1j32_A 106 LMLAMIEPGDEVIIPAPFWVSYPEMVK--LAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPD 183 (388)
T ss_dssp HHHHHCCTTCEEEEESSCCTHHHHHHH--HTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHH--HcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999 899999999886545678899999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
++++|+++|+++|+++|+|++|+.+.+++.+..++..+.. .++++++.|+||.++++|+|+||+++++ ++
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------~~ 255 (388)
T 1j32_A 184 EVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV--------PL 255 (388)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH--------HH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCH--------HH
Confidence 9999999999999999999999998887765555555543 3568999999999999999999999875 67
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... .+.+++++.+.++..+++. .+.++++..++++++++.+.+.|+++|++.+. .|.+++++|+.++...
T Consensus 256 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~- 332 (388)
T 1j32_A 256 VKAATKIQGHSTSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFYMFPSIAKTG- 332 (388)
T ss_dssp HHHHHHHHHTTTCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCC-CCCBTTEECCBCGGGT-
T ss_pred HHHHHHHHhhcccCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHhhCCCCccc-CCCeeEEEEEecCCCC-
Confidence 777776543 3466778888888888864 34678888999999999999999998888844 6778888887775311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+++++||.+.||..|+.++++|++++.+++++++++++|+++++++
T Consensus 333 ---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 333 ---RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp ---CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 1456777777666799999998887788999999989999999999999998765
No 6
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-47 Score=358.43 Aligned_cols=354 Identities=23% Similarity=0.364 Sum_probs=297.3
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
..+++++.|.| ++++|+.+.+++.+++......+|++..|..+||+++++++.+.++.++++++|++|+|+++++.
T Consensus 57 ~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~ 132 (447)
T 3b46_A 57 RELINLGQGFF----SYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGIL 132 (447)
T ss_dssp SCCEECCCCSC----SSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHH
T ss_pred CCeEEccCCCC----CCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 35678888876 77889999999999987523457888789999999999999888887778889999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC----------CccCChhhHHHhhccCceEEEEeCC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK----------RWEVDLDGVEALADENTVAIVIINP 157 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~l~~p 157 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.+++.+++ ++.+|+++|++++++++++|++++|
T Consensus 133 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 210 (447)
T 3b46_A 133 SCLMGLLNAGDEVIVFEPFFDQYIPNIE--LCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210 (447)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHcCCCCEEEEeCCCchhHHHHHH--HcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence 9999999999999999999999999999 999999999886542 5789999999999888999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc--CCCccEEEEecCcccccccccceEEEEe-
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF--GSIVPVITLGSISKRWIVPGWRLGWLVT- 234 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~s~sK~~~~~g~r~G~i~~- 234 (387)
+||||.++|.+++++|+++|++||+++|+||+|+++.+++ ...++..+ +..++++++.|+||.|+++|+|+||+++
T Consensus 211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~ 289 (447)
T 3b46_A 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289 (447)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence 9999999999999999999999999999999999988876 33344444 1235789999999999999999999999
Q ss_pred eCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 235 SDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
++ ++++.+.... ...++++++.|.++..+|+... +.++++..++++++++.+.+.|+++ ++.+ ..|.+
T Consensus 290 ~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~ 359 (447)
T 3b46_A 290 NA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPY-TAPEG 359 (447)
T ss_dssp CH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCE-ECCSB
T ss_pred CH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCe
Confidence 65 6788777653 2456778889998888887542 4668888999999999999999988 7774 37888
Q ss_pred eEEEEEecCcccccC----------CCcHHHHHHHHHHhcCeEEEcCCccCC-------CCeEEEEeeCChHhHHHHHHH
Q 038416 313 AMFVMVKLNVSMLED----------IGDDLEFCLKLAKEESVIILPGRTVGM-------KNWLRIAFAAEPATLEDGLER 375 (387)
Q Consensus 313 g~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~~Ri~~~~~~e~~~~~~~~ 375 (387)
|+|+|++++....+. ..+..++...+++++||.+.||..|+. .+++||+++.+++++++++++
T Consensus 360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~ 439 (447)
T 3b46_A 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVER 439 (447)
T ss_dssp SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 999999886421111 124557777787778999999988753 579999999899999999999
Q ss_pred HHH
Q 038416 376 IKA 378 (387)
Q Consensus 376 l~~ 378 (387)
|++
T Consensus 440 l~~ 442 (447)
T 3b46_A 440 LKL 442 (447)
T ss_dssp GGG
T ss_pred HHH
Confidence 876
No 7
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=5.7e-47 Score=356.64 Aligned_cols=358 Identities=21% Similarity=0.377 Sum_probs=304.7
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH-YNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQA 85 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a 85 (387)
...++++.|.| ++++++.+.+++.+++.... ..+|++..+..++|+.+++++.+.++..+++ ++|++|+|++++
T Consensus 28 ~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a 103 (422)
T 3fvs_A 28 HDVVNLGQGFP----DFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA 103 (422)
T ss_dssp SCCEECCCSSC----SSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHH
T ss_pred CCceEeCCCCC----CCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHH
Confidence 35677778776 78999999999999988653 3578887889999999999999888877778 799999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC----------CCCccCChhhHHHhhccCceEEEEe
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP----------EKRWEVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~v~l~ 155 (387)
+..++.+++++||+|+++.|+|+++...+. ..|.+++.+++++ ..++.+|++++++++++++++|+++
T Consensus 104 ~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 181 (422)
T 3fvs_A 104 LFTAFQALVDEGDEVIIIEPFFDCYEPMTM--MAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 181 (422)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEcCCCchhhHHHHH--HcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEEC
Confidence 999999999999999999999999999999 9999999998865 2356789999999999899999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEe
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
+|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+++....++..+.. .++++++.|+||.|+++|+|+||+++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~ 261 (422)
T 3fvs_A 182 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG 261 (422)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEEC
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEe
Confidence 99999999999999999999999999999999999999988776666666543 46789999999999999999999998
Q ss_pred eCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 235 SDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDE------TNEAFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
++ ++++.+..... ..++++++.+.++..+++. ..+.++++..++++++++.+.+.|+++ ++.+
T Consensus 262 ~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 331 (422)
T 3fvs_A 262 PD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKP- 331 (422)
T ss_dssp CH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEE-
T ss_pred CH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCee-
Confidence 76 67887776543 4567788999998888874 124678889999999999999999998 7773
Q ss_pred CCCCceEEEEEecCcccccCCCc---------HHHHHHHHHHhcCeEEEcCCccCC-------CCeEEEEeeCChHhHHH
Q 038416 308 VKPQGAMFVMVKLNVSMLEDIGD---------DLEFCLKLAKEESVIILPGRTVGM-------KNWLRIAFAAEPATLED 371 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~~g~~~~~-------~~~~Ri~~~~~~e~~~~ 371 (387)
..|.+++|+|+.++..... ..+ ..++...+++++||.+.||..|+. .+++||+++.+++++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~ 410 (422)
T 3fvs_A 332 IIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQA 410 (422)
T ss_dssp EBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHH
T ss_pred cCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHH
Confidence 4789999999987642110 000 457788888888999999998853 68999999889999999
Q ss_pred HHHHHHHHHHH
Q 038416 372 GLERIKAFCQR 382 (387)
Q Consensus 372 ~~~~l~~~~~~ 382 (387)
++++|++++++
T Consensus 411 ~l~~l~~~l~~ 421 (422)
T 3fvs_A 411 MDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999998865
No 8
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=5.1e-46 Score=346.60 Aligned_cols=354 Identities=17% Similarity=0.252 Sum_probs=302.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+.|++ ++++++.+.+++.+++... ..+|++. ..++++.+++++.+.++.++++++|++|+|+++++..
T Consensus 28 ~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~ 100 (391)
T 3dzz_A 28 KELPMWIAEM----DFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA 100 (391)
T ss_dssp TCEECCSSCC----SSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred CceeccccCC----CCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence 5667777765 8899999999999998764 3466654 5899999999999888877888999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC-CCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCC
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL-PEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~ 166 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.++++ ...++.+|+++|+++++ +++++|++++|+||||.++|
T Consensus 101 ~~~~l~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 101 MVRQFTSPGDQILVQEPVYNMFYSVIE--GNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHHHSCTTCEEEECSSCCHHHHHHHH--HTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHhCCCCCeEEECCCCcHHHHHHHH--HcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence 999999999999999999999999999 999999999885 34456689999999997 78999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
.+++++|+++|+++|+++|+|++|+++.+.+....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 251 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P 251 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence 999999999999999999999999999888766666666543 4578999999999999999999999863 2
Q ss_pred hHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEecC
Q 038416 245 GFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 245 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++.+.+..... ..++++++.+.++..+++. .+.++++..++++++++.+.+.|++ +|++. +..+.+++++|+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 329 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDIS 329 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECG
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehh
Confidence 67777776532 3457888888888888875 4677889999999999999999998 88888 447888988998886
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCC--CeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMK--NWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
... .+..++...+++++||.+.||..|+.. +++||+++.+++++++++++|++++++++
T Consensus 330 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 330 ALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp GGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred hcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 421 146677777766789999999988764 89999999899999999999999998764
No 9
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.6e-46 Score=351.90 Aligned_cols=356 Identities=19% Similarity=0.235 Sum_probs=301.9
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~ 88 (387)
+++++.|++. .+++++.+++++.+++.......|++..+..++++.+++++.+.++..+++ ++|++|+|+++++..
T Consensus 41 ~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~ 117 (407)
T 3nra_A 41 PVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFL 117 (407)
T ss_dssp CEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred eeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 5677777652 378899999999999875433468777889999999999999888876666 799999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC----CCCccCChhhHHHhhccCceEEEEeCCCCCcccc
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP----EKRWEVDLDGVEALADENTVAIVIINPGNPCGNV 164 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~ 164 (387)
++.+++++||+|+++.|+|.++...++ ..|.+++.++++. ++++.+|+++++++++++++++++++|+||||.+
T Consensus 118 ~~~~l~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 195 (407)
T 3nra_A 118 AVAATVARGDKVAIVQPDYFANRKLVE--FFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVV 195 (407)
T ss_dssp HHHTTCCTTCEEEEEESCCTHHHHHHH--HTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCC
T ss_pred HHHHhCCCCCEEEEcCCcccchHHHHH--HcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcc
Confidence 999999999999999999999999999 9999999998743 3567899999999998889999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC--CCccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG--SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
+|.+++++|+++|++||+++|+|++|+.+.+++....++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus 196 ~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 269 (407)
T 3nra_A 196 YSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------ 269 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH------
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH------
Confidence 9999999999999999999999999999988877666666653 35678999999999999999999999865
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++++.+..... ...+++++.+.++..+++. .+.++++..++++++++.+.+.|++++++.. ..+.+++++|+.++
T Consensus 270 --~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~ 345 (407)
T 3nra_A 270 --AIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFA-RTPQAGSYLFPRLP 345 (407)
T ss_dssp --HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBC-CCCSBSSEECCBCC
T ss_pred --HHHHHHHHHHhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCeeEEEEEeCC
Confidence 78888776643 4556677888888877764 3456788888999999999999999988884 47888899998886
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
... .+..++...+++++||.+.||..|+ ..+++||+++.+++++++++++|++++++++
T Consensus 346 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 346 KLA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp CBS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 421 2466777777777899999998886 3689999998899999999999999998875
No 10
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=7.9e-46 Score=345.12 Aligned_cols=354 Identities=23% Similarity=0.427 Sum_probs=298.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED-VYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+.+... ..+|++..+..++|+.+++++.+.++..+++++ |++|+|+++++.
T Consensus 27 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (389)
T 1gd9_A 27 DVISLGIGEP----DFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFL 101 (389)
T ss_dssp SCEECCCCSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHH
T ss_pred CeEecCCCCC----CCCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHH
Confidence 4667777765 6678999999999998764 347887778999999999999887776677889 999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|++++++++++++++|++++|+||||.++|.
T Consensus 102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~ 179 (389)
T 1gd9_A 102 MGLSAFLKDGEEVLIPTPAFVSYAPAVI--LAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTK 179 (389)
T ss_dssp HHHTTTCCTTCEEEEEESCCTTHHHHHH--HHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHH--HCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCH
Confidence 9999999999999999999999999999 89999999998654567789999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+|++|+.+.+.+.+..++..+.. .++++++.|+||.++++|+|+||+++++ ++
T Consensus 180 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 251 (389)
T 1gd9_A 180 KDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS--------WI 251 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH--------HH
Confidence 99999999999999999999999998887654445555432 4578999999999989999999999975 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
++.+..... ..++++++.+.++..+|+... +.++++..++++++++.+.+.|+++ ++.+. .|.+++++|+.++...
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 329 (389)
T 1gd9_A 252 IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTV-KPKGAFYIFPRIRDTG 329 (389)
T ss_dssp HHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCC-CCCBTTEECCBCGGGT
T ss_pred HHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeec-CCCeeeEEEEeccCCC
Confidence 888876543 456778889999888887532 2378888999999999999999988 78744 6778888888875311
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++++.
T Consensus 330 ----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 330 ----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp ----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 14567777776578999999988764 67999999889999999999999998764
No 11
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.6e-46 Score=350.02 Aligned_cols=358 Identities=18% Similarity=0.298 Sum_probs=293.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+++.......|++..+..++|+.+++++.+.++.++++ ++|++|+|+++++.
T Consensus 38 ~~idl~~g~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~ 113 (412)
T 2x5d_A 38 DIIDLSMGNP----DGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLA 113 (412)
T ss_dssp CCEECSSCCC----CSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHH
T ss_pred CEEecCCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHH
Confidence 4567777766 677899999999998865434578777789999999999998777766777 79999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|++++++++++++++|++++|+||||.++|.
T Consensus 114 ~~~~~~~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~ 191 (412)
T 2x5d_A 114 HLMLATLDHGDTILVPNPSYPIHIYGAV--IAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVEL 191 (412)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHH--HHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHH--HcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCH
Confidence 9999999999999999999999999999 89999999998755466678999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+|++|+.+.+.+....++..+.. .++++++.|+||.++++|+|+||+++++ ++
T Consensus 192 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 263 (412)
T 2x5d_A 192 DFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP--------EL 263 (412)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH--------HH
Confidence 99999999999999999999999998887655555555532 4578999999999989999999999965 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... .+++++++.+.++..+|+.. +.++++..++++++++.+.+.|+++ ++.+ ..+.+|+|+|++++...
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~~~~~~~~- 339 (412)
T 2x5d_A 264 VSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREA-GWMV-ENPKASMYVWAKIPEPY- 339 (412)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHH-TCCC-CCCSBSSEEEEECCTTT-
T ss_pred HHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEe-cCCCeeeEEEEEcCCcc-
Confidence 887776543 35678889999988888753 4678888999999999999999988 7774 36778889999886311
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
. ..+..++...+++++||.+.||..|.. .+++||+++.+++++++++++|+++++++..
T Consensus 340 ~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 400 (412)
T 2x5d_A 340 A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRADGL 400 (412)
T ss_dssp G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcCC
Confidence 0 013567777777778999999988853 5799999988999999999999999987653
No 12
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=4.4e-46 Score=347.87 Aligned_cols=353 Identities=21% Similarity=0.396 Sum_probs=290.8
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC---CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH---YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
|.+.+++++.|+| ++++++.+.+++.+++.... ..+|++..+..++|+.+++++.+.++.++++++|++|+|+
T Consensus 33 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~ 108 (398)
T 3ele_A 33 GKENVYDFSIGNP----SIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGA 108 (398)
T ss_dssp CGGGCEECCSCCC----CSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSH
T ss_pred CCCCeEEeecCCC----CCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCH
Confidence 4456788888766 77889999999999987632 3578887899999999999999888888889999999999
Q ss_pred HHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 83 SQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
++++..++.+++++| |+|+++.|+|+++...++ ..|.+++.+++++ +++.+|+++|++++++++++|++++|+|||
T Consensus 109 ~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~p~npt 185 (398)
T 3ele_A 109 AASLSICFRALTSDAYDEFITIAPYFPEYKVFVN--AAGARLVEVPADT-EHFQIDFDALEERINAHTRGVIINSPNNPS 185 (398)
T ss_dssp HHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHH--HTTCEEEEECCCT-TTSSCCHHHHHHTCCTTEEEEEECSSCTTT
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHH--HcCCEEEEEecCC-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCC
Confidence 999999999999999 999999999999999999 9999999999864 367899999999999899999999999999
Q ss_pred cccCCHHHHHHHHHHHHh------cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 162 GNVFSYQHLQKIARTARN------LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~------~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
|.++|.+++++|+++|++ +|+++|+||+|+.+.+++........ ..+++++++|+||.++++|+|+||++++
T Consensus 186 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 263 (398)
T 3ele_A 186 GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK--YYDNTLVCYSYSKSLSLPGERIGYVLVP 263 (398)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG--TCSSEEEEEESTTTSSCTTTCCEEEECC
T ss_pred CCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh--hcCCeEEEEehhhcCCCccceeEEEEEc
Confidence 999999999999999999 99999999999998887654333322 2357899999999999999999999997
Q ss_pred CCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 038416 236 DPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA 313 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 313 (387)
+. ......+.+.+..... ...+++.+.+.++..+++... ..+.++++++.+.+.|+++ ++. +..|.++
T Consensus 264 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~ 333 (398)
T 3ele_A 264 DE--VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAYKENRDLLYEGLTRI-GYH-CFKPDGA 333 (398)
T ss_dssp TT--STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHHHHHHHHHHHHHHH-TCC-EECCSBS
T ss_pred ch--hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHc-CCe-ecCCCee
Confidence 62 1101113333433322 245667788888877776532 3566777888888888887 677 4478889
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+++|++++.. +..++...+ .++||.+.||..|+.++++||+++.+++++++++++|++++++++
T Consensus 334 ~~~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 334 FYMFVKALED------DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp SEEEEECSSS------CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCC------CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 8899988641 455666654 677999999999988899999999899999999999999998875
No 13
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.1e-46 Score=346.69 Aligned_cols=345 Identities=22% Similarity=0.341 Sum_probs=292.8
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCC-CEEEcCChHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPE-DVYLTLGCSQA 85 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~a 85 (387)
+.+++++.|.+ +++.++.+.+++.+.+.. ..+|++..+..++|+.+++++.+.++.. ++++ +|++|+|++++
T Consensus 30 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~a 103 (396)
T 3jtx_A 30 MEAVPLHIGEP----KHPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA 103 (396)
T ss_dssp CCCEECSCCSC----CSCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHH
T ss_pred CCeEEeCCcCC----CCCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHH
Confidence 45677778775 788999999999998863 4578888889999999999999888866 7788 99999999999
Q ss_pred HHHHHHhhcCCC-----CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 86 IEISLSVLARPG-----ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 86 ~~~~~~~l~~~g-----~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
+..++.+++++| |+|+++.|+|+++...+. ..|.+++.+++ .++++.+|+++++++++++++++++++|+||
T Consensus 104 l~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~--~~g~~~~~v~~-~~~g~~~d~~~l~~~~~~~~~~v~l~~p~np 180 (396)
T 3jtx_A 104 LFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATL--LGGGEIHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNNP 180 (396)
T ss_dssp HHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHH--HTTCEEEEEEC-CTTTCCCCGGGSCHHHHHTEEEEEEESSCTT
T ss_pred HHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHH--HcCCEEEEeec-CCCCCccCHHHHHHhhccCcEEEEEECCCCC
Confidence 999999999996 799999999999999999 99999999998 4567788999999999889999999999999
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccc---cC-CCccEEEEecCcccccccccceEEEEee
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGV---FG-SIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~---~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
||.++|.+++++|+++|+++|+++|+||+|+++.+++..+.+ +.. +. ..++++++.|+||.|+++|+|+||++++
T Consensus 181 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (396)
T 3jtx_A 181 SGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGD 260 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEEC
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeC
Confidence 999999999999999999999999999999998887632222 111 11 2467899999999999999999999986
Q ss_pred CCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 236 DPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
+ ++++.+..... .+++++++.+.++..+++. +.++.+..++++++++.+.+.|+++ +. +..|.+++
T Consensus 261 ~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~~~ 327 (396)
T 3jtx_A 261 A--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV--FD-VKLPDASF 327 (396)
T ss_dssp H--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT--SC-CCCCSSSS
T ss_pred H--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc--CC-ccCCCeeE
Confidence 5 78888876643 4567889999999888875 4678888999999999999999875 33 33678899
Q ss_pred EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--------CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 315 FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--------KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
++|+.++. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 328 ~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 328 YIWLKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp EEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred EEEEECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 99998874 14667888887888999999998864 47999999889999999999998764
No 14
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=7.9e-46 Score=344.35 Aligned_cols=353 Identities=17% Similarity=0.299 Sum_probs=300.3
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
|.+.+++++.|++ ++++++.+.+++.+++... ..+|+.. ..++++.+++++.+.++..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADM----DFEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSC----SSCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 4456777888765 8899999999999998764 3467654 5789999999999888877888999999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC-CccCChhhHHHhhccCceEEEEeCCCCCcccc
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK-RWEVDLDGVEALADENTVAIVIINPGNPCGNV 164 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~ 164 (387)
+..++.+++++||+|+++.|+|+++...++ ..|.++..+++++++ ++.+|++++++++++++++|++++|+||||.+
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~ 172 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVT--TNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRV 172 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHH--HTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHH--HcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcC
Confidence 999999999999999999999999999999 999999999886433 36689999999998899999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
+|.+++++|+++|+++|+++|+|++|+.+.+.+....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 173 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------ 246 (383)
T 3kax_A 173 WKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN------ 246 (383)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC------
T ss_pred cCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC------
Confidence 99999999999999999999999999999888766666666554 3678999999999999999999999853
Q ss_pred chhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEe
Q 038416 243 NSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 243 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~ 319 (387)
+++.+.+..... ..++++++.+.++..+++. .+.++++..++++++++.+.+.|++ +|++.+ ..+.+++++|+.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~ 323 (383)
T 3kax_A 247 -EKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSV-MKPEGSFLLWID 323 (383)
T ss_dssp -HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE-CCCSBSSEEEEE
T ss_pred -HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecCCceEEEEEE
Confidence 257777776543 2347888899998888875 4677888999999999999999998 788884 478888888888
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
++... .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 324 ~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 324 CSALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CGGGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred ccccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 87532 15667878776678999999988876 48999999989999999999998875
No 15
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.3e-46 Score=350.25 Aligned_cols=351 Identities=18% Similarity=0.279 Sum_probs=294.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+++.......|++..+..++|+.+++++.+.++.++++ ++|++|+|+++++.
T Consensus 48 ~~idl~~g~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~ 123 (404)
T 2o1b_A 48 PLINMAVGIP----DGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLV 123 (404)
T ss_dssp CCEECCCCSC----SSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHH
T ss_pred CEEecCCcCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHH
Confidence 3567777766 567889999999998864323468876789999999999998777766676 79999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.+++++ +++.+|+++|++++++++++|++++|+||||.++|.
T Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 124 AVPTCVINPGDYVLLPDPGYTDYLAGVL--LADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp HHHHHHCCTTCEEEEEESCCSSHHHHHH--HTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCchhHHHHHH--HCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence 9999999999999999999999999999 8999999998865 566789999999887788999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+||+|+.+.+++ ...++..+. ..++++++.|+||.++++|+|+||+++++ ++
T Consensus 201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~ 271 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK--------DM 271 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--------HH
Confidence 999999999999999999999999988765 233343332 23568999999999988999999999865 68
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ...+++++.+.++..+++.. +.++++..++++++++.+.+.|+++ ++. +..+.+++++|++++..
T Consensus 272 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~-- 346 (404)
T 2o1b_A 272 IQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKA-DLP-FVHAKGGIYVWLETPPG-- 346 (404)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCCBSSEEEEECCTT--
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhc-CCe-ecCCCcceEEEEeCCCC--
Confidence 888876543 45678889999998888764 6778889999999999999999988 777 43677888899988631
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++
T Consensus 347 ---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 347 ---YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp ---CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGGG
T ss_pred ---CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 14567778877778999999988864 68999999888899999999999887654
No 16
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.3e-46 Score=347.21 Aligned_cols=349 Identities=18% Similarity=0.271 Sum_probs=299.0
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++.|.+ ++++++.+.+++.+++... ..+|++ .+ .++|+.+++++.+.++..+++++|++|+|+++++.
T Consensus 23 ~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 23 QGVLPLWVAES----DFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLY 95 (377)
T ss_dssp TTSEECCSSCC----CSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred CCeeeecccCC----CCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHH
Confidence 35677777755 7889999999999998864 347887 66 89999999999988887788999999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.++++.+ +|+++++++++++++++++++|+||||.++|.
T Consensus 96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 96 IAIDHFTPAQSKVIVPTPAYPPFFHLLS--ATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp HHHHHHSCTTCCEEEEESCCTHHHHHHH--HHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHH--HcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999 89999999988643 89999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCC-CCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGS-TPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+|++|+.+.+.+ ....++..+...++++++.|+||.++++|+|+||+++.+ +++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~ 242 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD 242 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence 999999999999999999999999998877 555566555445678999999999999999999988743 267
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEecCccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
++.+..... .+++++++.+.++..+++.. +.++++..++++++++.+.+.|++ +|++.+ ..+.+++++|+.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~ 320 (377)
T 3fdb_A 243 AEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKI-TPMQATYLMWIDFRDTT 320 (377)
T ss_dssp HHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEE-CCCSBCSEEEEECTTSC
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecCCeeEEEEEECcccC
Confidence 777776543 45678889999988888753 577889999999999999999998 888884 47888888899887532
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
. ..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++++
T Consensus 321 ~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 321 I-----EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp C-----CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred C-----CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1 235677777778999999998875 68999999989999999999999988654
No 17
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.8e-45 Score=343.87 Aligned_cols=356 Identities=15% Similarity=0.213 Sum_probs=296.7
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++.+.+ ++++++.+.+++.+.+... ...|+.. ..++|+.+++++.+.++.++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADM----EFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSC----SSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 45677777765 6788999999999998653 3467764 799999999999877776678899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC-CccCChhhHHHhhc-cCceEEEEeCCCCCccccC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK-RWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~ 165 (387)
.++.+++++||+|+++.|+|+++...+. ..|.+++.+++++++ ++.+|+++|+++++ +++++|++++|+||||.++
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 181 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIK--NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHH--TTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHH--HcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCc
Confidence 9999999999999999999999999999 999999998875332 46689999999997 6889999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------- 254 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN------- 254 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------
Confidence 9999999999999999999999999998887765555655543 3578999999999998999999999864
Q ss_pred hhHHHHHHhhhh-cc-CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEec
Q 038416 244 SGFVDSIKGCLN-AA-SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 244 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~ 320 (387)
+++++.+..... .. .+++++.+.++..+++.. +.++++..++++++++.+.+.|++ +|++.. ..+.+++++|+++
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~ 332 (399)
T 1c7n_A 255 PDIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA-PLIEGTYLQWIDF 332 (399)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC-CCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE-ecCCceEEEEEEc
Confidence 247777776543 22 367888998888888753 577888899999999999999998 888884 4778888888888
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+... .+..++...+++++||.+.||..|+ .++++||+++..++++++++++|+++++++++
T Consensus 333 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 333 RALK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp GGGC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence 6421 1456777777667899999998886 36899999988889999999999999988764
No 18
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=9.6e-46 Score=349.98 Aligned_cols=353 Identities=22% Similarity=0.316 Sum_probs=295.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++++.|.|. +++.+++.+.+++.+++... ...+|++..|..+||+.+++++.+.++.+ ++++|++|+|+++++
T Consensus 77 ~~i~l~~g~p~--~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al 153 (448)
T 3aow_A 77 DIISLAGGLPN--PKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQAL 153 (448)
T ss_dssp SSEECCCCCCC--GGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHH
T ss_pred CcEeCCCCCCC--chhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHH
Confidence 45677777662 22347888999999888753 12478887899999999999997766765 788999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----c--CceEE-EEeCCCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----E--NTVAI-VIINPGN 159 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~--~~~~v-~l~~p~n 159 (387)
..++++++++||+|+++.|+|+++...++ ..|.+++.++++++ ++|+++|+++++ + ++++| ++++|+|
T Consensus 154 ~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N 228 (448)
T 3aow_A 154 DLIGRVFLNPGDIVVVEAPTYLAALQAFN--FYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228 (448)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHH--TTCCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred HHHHHHHcCCCCEEEEeCCChHHHHHHHH--HcCCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence 99999999999999999999999999999 99999999988542 489999999887 5 67887 5689999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
|||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..++..++++++.||||.++ +|+|+||+++++
T Consensus 229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--- 304 (448)
T 3aow_A 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--- 304 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH---
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH---
Confidence 9999999999999999999999999999999999888766666777766678999999999998 999999999975
Q ss_pred cccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhhc-CC-CCCCCCCCCceEE
Q 038416 240 ILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDET-NEAFFAKIIGLLKETADICYERIKE-IP-CITCPVKPQGAMF 315 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~g~~ 315 (387)
++++.+..... ...+++++.|.++..+|+.. .+.++++..+.++++++.+.+.|++ +| ++. +..|.+|+|
T Consensus 305 -----~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~ 378 (448)
T 3aow_A 305 -----GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMF 378 (448)
T ss_dssp -----HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSE
T ss_pred -----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEE
Confidence 78888876543 34567889999999888764 2567888889999999999999987 67 577 447888999
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+|++++.. .+..++...++++ ||.+.||..|.. .+++||+++. +++++++++++|++++++..+
T Consensus 379 ~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 379 IWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp EEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99998642 2456777777655 999999988843 5799999975 789999999999999988764
No 19
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=4.8e-46 Score=349.01 Aligned_cols=355 Identities=22% Similarity=0.345 Sum_probs=300.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~ 86 (387)
..+++++.|.| ++++++.+.+++++++......+|++..+..++|+.+++++.+.++..+++ ++|++|+|+++++
T Consensus 23 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 23 PSVVNLGQGFP----DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp TTSEECSSCCC----CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCeEEecCCCC----CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 45677777766 889999999999999976545578887789999999999999888877788 8999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC---------CCCccCChhhHHHhhccCceEEEEeCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP---------EKRWEVDLDGVEALADENTVAIVIINP 157 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~v~l~~p 157 (387)
..++.+++++||+|+++.|+|.++...+. ..|.+++.+++.+ ..++.+|++++++++++++++|++++|
T Consensus 99 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p 176 (410)
T 3e2y_A 99 FNSIQGLVDPGDEVIIMVPFYDCYEPMVR--MAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTP 176 (410)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHH--HcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCC
Confidence 99999999999999999999999999999 9999999988763 245678999999999889999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeC
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+||||.+++.+++++|+++|+++|+++|+|++|+++.+++....++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus 177 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 256 (410)
T 3e2y_A 177 HNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA 256 (410)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH
Confidence 99999999999999999999999999999999999998876665665554 34678999999999999999999999876
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDE------TNEAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
++++.+..... ..++++++.+.++..+++. ..+.++++..++++++++.+.+.|+++ ++. +..
T Consensus 257 --------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 326 (410)
T 3e2y_A 257 --------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIV 326 (410)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEB
T ss_pred --------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecC
Confidence 78888776643 4567888999998888873 224678888999999999999999988 777 347
Q ss_pred CCceEEEEEecCcccc--c----CCCcHHHHHHHHHHhcCeEEEcCCccCC-------CCeEEEEeeCChHhHHHHHHHH
Q 038416 310 PQGAMFVMVKLNVSML--E----DIGDDLEFCLKLAKEESVIILPGRTVGM-------KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~--~----~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
|.+++|+|+.+..... + +..++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l 406 (410)
T 3e2y_A 327 PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIF 406 (410)
T ss_dssp CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHH
T ss_pred CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHH
Confidence 8899999998764211 0 0011347777788888999999998864 4899999999999999999998
Q ss_pred HH
Q 038416 377 KA 378 (387)
Q Consensus 377 ~~ 378 (387)
++
T Consensus 407 ~~ 408 (410)
T 3e2y_A 407 RA 408 (410)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 20
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.6e-45 Score=352.90 Aligned_cols=352 Identities=21% Similarity=0.349 Sum_probs=290.1
Q ss_pred CcHHHHHHHHHHhcCC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-CCCCeEE
Q 038416 26 DSTVAEDAVVDALRTA---HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-RPGANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~g~~vl 101 (387)
.|+.+.+++.+.+... ....|++..|..++|+.+++++.++++.++++++|++|+|+++++..++.+++ ++||.|+
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 186 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGIL 186 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence 4555666667766652 45689998999999999999999888888899999999999999999999998 8999999
Q ss_pred EcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 102 IPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
++.|+|.++...++ ..|.+++.++++.+++|.+|+++|++++++ ++++|++++|+||||.++|.+++++|++
T Consensus 187 v~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~ 264 (500)
T 3tcm_A 187 VPIPQYPLYSASIA--LHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVK 264 (500)
T ss_dssp EEESCCTHHHHHHH--HTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EeCCCcHhHHHHHH--HcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHH
Confidence 99999999999999 999999999998877889999999999876 6889999999999999999999999999
Q ss_pred HHHhcCcEEeecccccccccCC-CCCcccc----cc---CCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhH
Q 038416 176 TARNLGIIVIADEVYNHLAFGS-TPYVPMG----VF---GSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+|+++|+++|+|++|+.+.+++ ....++. .+ ..+.++++++|+||.| |++|+|+||+++... ++++
T Consensus 265 la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~ 339 (500)
T 3tcm_A 265 FCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPV 339 (500)
T ss_dssp HHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESC-----CTTH
T ss_pred HHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCC-----CHHH
Confidence 9999999999999999988864 3344432 22 3334689999999998 899999999998310 1268
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhc---------cHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDET---------NEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
++.+.+......+++.++|.++..+++.. ....+.+..++++++++.+.+.|+++|++.+. .|++++|+|
T Consensus 340 ~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~ 418 (500)
T 3tcm_A 340 REQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN-EAEGAMYVF 418 (500)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTTEEC
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEEEEe
Confidence 88887766556778889999998888631 12456777888999999999999999899854 889999999
Q ss_pred EecCccc-------ccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 318 VKLNVSM-------LEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 318 ~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+++..+. ..+..++..++..+++++||.+.||..|+. ..+||++++.+++++++++++|+++++++.+
T Consensus 419 ~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 419 PQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp CEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHH
T ss_pred eeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 6654210 001112334456778888999999999874 3589999998899999999999999988765
No 21
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-45 Score=342.50 Aligned_cols=348 Identities=22% Similarity=0.352 Sum_probs=293.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+.+... ...|++..+..++|+.+++++.+.+|.+++++ +|++|+|+++++.
T Consensus 31 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 105 (386)
T 1u08_A 31 QAINLSQGFP----DFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALY 105 (386)
T ss_dssp TCEECCCSSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHH
T ss_pred CeEEecCCCC----CCCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHH
Confidence 4567777765 6778999999999998753 35788777899999999999988777777888 9999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.++++.+ ++.+|+++|++++++++++|++++|+||||.++|.
T Consensus 106 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 182 (386)
T 1u08_A 106 AAITALVRNGDEVICFDPSYDSYAPAIA--LSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ 182 (386)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHhCCCCCEEEEeCCCchhHHHHHH--HcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCH
Confidence 9999999999999999999999999999 99999999988643 56799999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++|+++|+++|+++|+|++|+.+.+++....++..+. ..++++++.|+||.++++|+|+||+++++ ++
T Consensus 183 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 254 (386)
T 1u08_A 183 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI 254 (386)
T ss_dssp HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HH
Confidence 9999999999999999999999999888776555554442 23568999999999999999999999875 67
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
++.+..... ..++++++.+.++..+|+.. +.++++..++++++++.+.+.|+++ ++. +..|.+|+++|++++...
T Consensus 255 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~- 330 (386)
T 1u08_A 255 SAEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS- 330 (386)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC-
T ss_pred HHHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC-
Confidence 787776543 35667788888888888754 5678889999999999999999988 777 436778899999886420
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEeeCChHhHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
..+..++...+++++||.+.||..|. .++++||+++.+++++++++++|++
T Consensus 331 --~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 331 --TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp --CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 01456777778777899999998775 3579999999899999999998854
No 22
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-45 Score=341.81 Aligned_cols=344 Identities=24% Similarity=0.411 Sum_probs=291.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++.+.+... ...|++..+..++|+.+++++.+.+|.++++++|++|+|+++++..
T Consensus 42 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~ 116 (389)
T 1o4s_A 42 DVINLTAGEP----DFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFN 116 (389)
T ss_dssp CCEECCCSSC----SSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHH
T ss_pred CEEEccCCCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHH
Confidence 3566667665 5677899999999998754 3478877789999999999998777766788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|+++|++++++++++|++++|+||||.++|.+
T Consensus 117 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 194 (389)
T 1o4s_A 117 AFMALLDPGDEVIVFSPVWVSYIPQII--LAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRRE 194 (389)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHH--HcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHH
Confidence 999999999999999999999999999 999999999986545678899999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++|+++|+|++|+.+.+++ ...++..+.. .++++++.|+||+++++|+|+||+++++ +++
T Consensus 195 ~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~--------~~~ 265 (389)
T 1o4s_A 195 FLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE--------KVA 265 (389)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH--------HHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH--------HHH
Confidence 99999999999999999999999988765 2334444432 4568999999999989999999999975 677
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+..... ...+++++.+.++..+|+.. +++..++++++++.+.+.|+++ ++.+. .|.+++++|+.++.
T Consensus 266 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~---- 335 (389)
T 1o4s_A 266 TAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKM-GVKFV-EPEGAFYLFFKVRG---- 335 (389)
T ss_dssp HHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT-TCCCC-CCSBSSEEEEECSS----
T ss_pred HHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc-CCeee-cCCcceEEEEeCCC----
Confidence 77776543 34567888888888888753 6777888889999999999988 78744 67788899988751
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+++++||.+.||..|+.++++||+++.+++++++++++|+++++
T Consensus 336 ---~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 336 ---DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp ---CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 4567777776577999999988877789999998899999999999988774
No 23
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=8.1e-46 Score=343.48 Aligned_cols=346 Identities=21% Similarity=0.273 Sum_probs=287.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+++.......|++..+..++|+.+++++.+.+|.+++++ +|++|+|+++++.
T Consensus 26 ~~idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (376)
T 2dou_A 26 GLIDLSIGST----DLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA 101 (376)
T ss_dssp CCEECSSCCC----CCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred CEEeccCCCC----CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 3567777766 6678999999999998654345787655789999999999987777666666 9999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.+++++.++||+|+++.|+|+++...++ ..|.+++.+++ .+++.+|++++++++++++++|++++|+||||.++|.
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 177 (376)
T 2dou_A 102 HLLLALTEPEDLLLLPEVAYPSYFGAAR--VASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADW 177 (376)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHHHHHH--HTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEECCCCcHhHHHHHH--HcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCH
Confidence 9999999999999999999999999999 89999999987 4566789999999887788999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|+++|+++|+++|+|++|+.+.+++.....+...+..++++++.|+||.++++|+|+||+++++ +++
T Consensus 178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 249 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------EAL 249 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------HHH
Confidence 999999999999999999999999988766332223222334578999999999989999999999865 788
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+..... .+.+++++.+.++..+++.. +.++++..+.++++++.+.+.|+++ +. +..+.+++++|++++..
T Consensus 250 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~--- 322 (376)
T 2dou_A 250 ARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG--- 322 (376)
T ss_dssp HHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT---
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC---
Confidence 88876543 44567888999998888753 6778889999999999999999886 55 33677888999988641
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
.+..++...++++ ||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 323 --~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 --VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp --CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred --CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 1456777777655 999999988864 68999999888999999999998764
No 24
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=6.3e-45 Score=339.20 Aligned_cols=350 Identities=20% Similarity=0.320 Sum_probs=297.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++.+.|++ ++++++.+.+++.+.+... ...|+. +..++++.+++++.+.++..+++++|++|+|+++++.
T Consensus 32 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~ 104 (391)
T 4dq6_A 32 NDLLPMWVADM----DFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAIS 104 (391)
T ss_dssp SCSEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred CCceeccccCC----CCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHH
Confidence 44567777765 8899999999999998764 335654 5589999999999988887788899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC--CCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL--PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
.++.+++++||+|+++.|+|+++...++ ..|.+++.++++ .+.++.+|++++++++++ ++++++++|+||||.++
T Consensus 105 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~ 181 (391)
T 4dq6_A 105 LLINELTKANDKIMIQEPVYSPFNSVVK--NNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVW 181 (391)
T ss_dssp HHHHHHSCTTCEEEECSSCCTHHHHHHH--HTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCC
T ss_pred HHHHHhCCCCCEEEEcCCCCHHHHHHHH--HcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCc
Confidence 9999999999999999999999999999 999999999987 345577899999999987 99999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
|.+++++|+++|+++|+++|+|++|+.+.+.+....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------- 254 (391)
T 4dq6_A 182 TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD------- 254 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------
T ss_pred CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------
Confidence 9999999999999999999999999999888776666666554 3678999999999999999999999864
Q ss_pred hhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEec
Q 038416 244 SGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 244 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~ 320 (387)
+++.+.+..... ..++++++.+.++..+++. .+.++++..++++++++.+.+.|++ +|++.+. .+.+++++|+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~ 332 (391)
T 4dq6_A 255 EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVR-KPEGTYLLWVDF 332 (391)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC-CCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEec-CCCccEEEEEEh
Confidence 257777766532 3447788888888888875 4567888999999999999999988 7888844 788888888888
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+... .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 333 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 333 SALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hhcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 6421 15667777776666999999988875 48999999999999999999998876
No 25
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=7.6e-45 Score=338.62 Aligned_cols=354 Identities=18% Similarity=0.234 Sum_probs=291.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHH-HHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPS-ARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~-lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
+.+++++.+.+ ++++++.+.+++.+.+... ...|+.. ..+ +|+.+++++.+.++..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDM----DFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCC----CCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 35677777765 6789999999999998653 3467764 578 99999999988788778889999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC-CccCChhhHHHhhcc-CceEEEEeCCCCCcccc
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK-RWEVDLDGVEALADE-NTVAIVIINPGNPCGNV 164 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~ 164 (387)
..++++++++||+|+++.|+|+++...++ ..|.+++.++++.++ +|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~ 178 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIE--GNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKV 178 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHH--HTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHH--HCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcC
Confidence 99999999999999999999999999999 899999999886543 466899999999975 78999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+|.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+....... +.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~ 250 (390)
T 1d2f_A 179 WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------S 250 (390)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------H
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------H
Confidence 9999999999999999999999999999888776555555554321013 9999999989999999999863 2
Q ss_pred hHHHHHHhhhh--cc-CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEec
Q 038416 245 GFVDSIKGCLN--AA-SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 245 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~ 320 (387)
++++.+..... .. .+++++.+.++..+++. .+.++++..++++++++.+.+.|++ +|++. +..+.+++++|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~ 328 (390)
T 1d2f_A 251 SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDL 328 (390)
T ss_dssp HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEEC
T ss_pred HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEc
Confidence 57777765543 23 36788888888888874 3567888899999999999999998 78887 44777888889888
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+... .+..++...+++++||.+.||..|+ .++++||+++.+++++++++++|++++++++
T Consensus 329 ~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~~ 390 (390)
T 1d2f_A 329 RPLN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 390 (390)
T ss_dssp GGGC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred cccC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhC
Confidence 6421 1456777777657899999998886 3679999998888999999999999988753
No 26
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=353.51 Aligned_cols=352 Identities=25% Similarity=0.428 Sum_probs=282.4
Q ss_pred cHHHHHHHHHHhcCC---CCCCCCCCCCcHHHHHHHHHHHhhcCC-CCCCCCCEEEcCChHHHHHHHHHhhcCCCC----
Q 038416 27 STVAEDAVVDALRTA---HYNCYSPTLGVPSARRGIADYLNRDLP-YKLSPEDVYLTLGCSQAIEISLSVLARPGA---- 98 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~ia~~~~~~~~-~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~---- 98 (387)
|..+.+++.+++... ....|++..|..++|+.+++++.++++ +++++++|++|+|+++++..++.+++++||
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d 182 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRT 182 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSE
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCC
Confidence 555556666666642 345799989999999999999998874 788899999999999999999999998875
Q ss_pred eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----CceEEEEeCCCCCccccCCHHHHHHH
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
.|+++.|+|..|...+. ..|.+++.++++++++|.+|+++|++++++ ++++|++++|+||||.++|.+++++|
T Consensus 183 ~Vlv~~p~y~~~~~~~~--~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i 260 (498)
T 3ihj_A 183 GVMIPIPQYPLYSAVIS--ELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDV 260 (498)
T ss_dssp EEEEEESCCTHHHHHHH--HTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred EEEEeCCCchhHHHHHH--HcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHH
Confidence 99999999999999999 999999999998777899999999999876 58999999999999999999999999
Q ss_pred HHHHHhcCcEEeecccccccccCCC-CCccccccC--------CCccEEEEecCcccc-cccccceEEEEeeCCCCcccc
Q 038416 174 ARTARNLGIIVIADEVYNHLAFGST-PYVPMGVFG--------SIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 174 ~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~ 243 (387)
+++|+++|+++|+||+|+.+.+++. .+.++..+. .+.++++++|+||.| |++|+|+||++... .+
T Consensus 261 ~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~-----~~ 335 (498)
T 3ihj_A 261 IHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVIN-----LH 335 (498)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEES-----CC
T ss_pred HHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEec-----CC
Confidence 9999999999999999999988754 445544331 234589999999999 78999999998411 01
Q ss_pred hhHHHHHHhhhhccCCcchHHHHHHHHHhhh------ccH---HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 244 SGFVDSIKGCLNAASHPVTFIQAAVPRIVDE------TNE---AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
+++++.+........+++.+.|.++..+++. ..+ ..+.+..++++++++.+.+.|+++|++.+. .|.+++
T Consensus 336 ~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~p~gg~ 414 (498)
T 3ihj_A 336 PEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCN-PLQGAM 414 (498)
T ss_dssp HHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBSS
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEec-CCCeEE
Confidence 3788888776655667888999998888863 111 234567788999999999999999899844 889999
Q ss_pred EEEEecCccc-------ccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 315 FVMVKLNVSM-------LEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 315 ~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
|+|++++.+. ..+..++..++..+++++||.+.||..|+. ..++|++++.+++++++++++|++++++++
T Consensus 415 ~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 415 YAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp EECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 9998764211 001212223367788888999999999874 358999999889999999999999999877
Q ss_pred hc
Q 038416 385 KK 386 (387)
Q Consensus 385 ~~ 386 (387)
++
T Consensus 495 ~~ 496 (498)
T 3ihj_A 495 EK 496 (498)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 27
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.6e-46 Score=343.32 Aligned_cols=340 Identities=19% Similarity=0.262 Sum_probs=286.4
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.|+.+.+++.+.+.. ..+|++..+..++|+.+++++.+.++.++++++|++|+|+++++..
T Consensus 24 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~ 97 (376)
T 3ezs_A 24 RGLDLGIGEP----QFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN 97 (376)
T ss_dssp CCCBCSSCCC----CSCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred CEEEeCCCCC----CCCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence 6778888776 778899999999988732 4578887889999999999998877777788999999999999999
Q ss_pred HHHhhcCC--CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 89 SLSVLARP--GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 89 ~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
++.+++++ ||+|+++.|+|+++...++ ..|.+++.+++++++++ ++ ++++++.++++++++++|+||||.++|
T Consensus 98 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v~~~~p~nptG~~~~ 172 (376)
T 3ezs_A 98 FPSFVLFDYQNPTIAYPNPFYQIYEGAAK--FIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLVILNSPNNPTGRTLS 172 (376)
T ss_dssp HHHHHTTTCSSCEEEEEESCCTHHHHHHH--HTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEEEECSSCTTTCCCCC
T ss_pred HHHHHcCCCCCCEEEEecCCcHhHHHHHH--HcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEEEEcCCCCCcCCCCC
Confidence 99999999 9999999999999999999 99999999998655443 33 666667678999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-----CCccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-----SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
.+++++|+++|+++|+++|+||+|+.+.+++.....+...+ ..++++++.|+||.++++|+|+||+++++
T Consensus 173 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~----- 247 (376)
T 3ezs_A 173 LEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS----- 247 (376)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH-----
T ss_pred HHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH-----
Confidence 99999999999999999999999999888763333222211 34678999999999999999999999865
Q ss_pred cchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEec
Q 038416 242 QNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKL 320 (387)
Q Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 320 (387)
++++.+..... ..++++++.+.++..+++. ..++++..++++++++.+.+.|+ ++. .|.+++++|+++
T Consensus 248 ---~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~~---~~~~~~~~~~~~ 316 (376)
T 3ezs_A 248 ---RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NTL---IYPYSFYVYLPV 316 (376)
T ss_dssp ---HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TCC---CCSBSSEEEEEC
T ss_pred ---HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CCC---CCCcceEEEEEC
Confidence 78888877654 4567889999999888875 35578888999999999998887 443 678899999988
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+ +..++...+++++||.+.||..|+ ..+++||+++.+++++++++++|+++++++
T Consensus 317 ~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 317 Q--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp S--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred C--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 6 356777877665899999999887 368999999889999999999999988654
No 28
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-45 Score=344.40 Aligned_cols=355 Identities=25% Similarity=0.398 Sum_probs=295.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~ 87 (387)
.+++++.|.+ +++.++.+.+++.+++... ...|++..+..++|+.+++++.+.+|.+++++ +|++|+|+++++.
T Consensus 26 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~ 100 (411)
T 2o0r_A 26 GAVNLGQGFP----DEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIA 100 (411)
T ss_dssp TCEESSCSSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHH
T ss_pred CeeeccCcCC----CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHH
Confidence 3567777665 6778999999999998763 45788877899999999999988777677788 9999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC-CCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE-KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
.++.+++++||+|+++.|+|+++...+. ..|.+++.++++.+ .++.+|+++|++++++++++|++++|+||||.++|
T Consensus 101 ~~~~~~~~~gd~Vl~~~~~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~ 178 (411)
T 2o0r_A 101 AAVLGLVEPGSEVLLIEPFYDSYSPVVA--MAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLS 178 (411)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHhcCCCCEEEEeCCCcHhHHHHHH--HcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCC
Confidence 9999999999999999999999999999 99999999987643 34678999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
.+++++|+++|+++|+++|+|++|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 250 (411)
T 2o0r_A 179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--------E 250 (411)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--------H
Confidence 999999999999999999999999998887765555555532 4578999999999999999999999865 6
Q ss_pred HHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 246 FVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
+++.+..... ..++.+++.+.++..+++.. +.++++..++++++++.+.+.|+++ ++.+ ..|.+++++|+.++...
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~~~~~~~~ 327 (411)
T 2o0r_A 251 LIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEI-GFAV-HDSYGTYFLCADPRPLG 327 (411)
T ss_dssp HHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHH-TCEE-CCCCBSSEEEEECGGGT
T ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCEe-cCCCeeEEEEEecCCCC
Confidence 7777766543 34566778888888888754 6778889999999999999999987 7773 36778889999886420
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccC-------------CCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVG-------------MKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+ .+..++...+++++||.+.||..|. ..+++||+++.+++++++++++|++++++.+
T Consensus 328 --~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 328 --Y-DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp --C-CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC---
T ss_pred --C-CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhccC
Confidence 0 1456777777777899999998772 2468999998889999999999988776554
No 29
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.2e-45 Score=345.59 Aligned_cols=352 Identities=18% Similarity=0.276 Sum_probs=300.5
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++.|.|++ +++.++.+.+++++.+... ...|+.. ..++++.+++++.+.++.++++++|++|+|+++|++
T Consensus 61 ~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~ 133 (421)
T 3l8a_A 61 PELLQMWVADM----DFLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAIS 133 (421)
T ss_dssp TTCEECCSSCC----CSCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred CCeeecccCCC----CCCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHH
Confidence 45677888765 8899999999999998764 3366653 389999999999988887788899999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC-CCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL-PEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~ 165 (387)
.+++++.++||+|+++.|+|+++...+. ..|.+++.+++. .+.++.+|+++|+++++ +++++|++++|+||||.++
T Consensus 134 ~a~~~~~~~gd~Vi~~~~~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~ 211 (421)
T 3l8a_A 134 IALQAFSEKGDAVLINSPVYYPFARTIR--LNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVW 211 (421)
T ss_dssp HHHHHHSCTEEEEEEEESCCHHHHHHHH--HTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHhcCCCCEEEECCCCcHHHHHHHH--HCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcC
Confidence 9999999999999999999999999999 999999999986 45557789999999997 7899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
+.+++++|+++|+++|+++|+||+|+++.+.+....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~------- 284 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN------- 284 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------
Confidence 9999999999999999999999999999988876667666543 4678999999999999999999999973
Q ss_pred hhHHHHHHhhh-h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 244 SGFVDSIKGCL-N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 244 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
+++.+.+.... . ..++++++++.++.++++. .++++++..++++++++++.+.|+++|++..+ .+.++++.|+.++
T Consensus 285 ~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~-~~~~~~~~~v~~~ 362 (421)
T 3l8a_A 285 ESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVM-EPEGTYLVWLDFS 362 (421)
T ss_dssp HHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEE-CCSBSSEEEEECG
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEe-CCCeeEEEEEecc
Confidence 26777776654 2 3457888999998888874 56778999999999999999999887788844 7888989999886
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.... +..++...+++++||.+.+|..|+. .+++||+++.+++++++++++|+++++
T Consensus 363 ~~~~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 363 AYAI----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GGTC----CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred ccCC----CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 5211 3457777777778999999988865 689999999999999999999998765
No 30
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.5e-45 Score=346.09 Aligned_cols=357 Identities=22% Similarity=0.362 Sum_probs=297.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a 85 (387)
.+++++.|.+ +++.++.+.+++.+++... ....|++..+..++|+.+++++.+.++.+++++ +|++|+|++++
T Consensus 38 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a 113 (429)
T 1yiz_A 38 KPLNLGQGFP----DYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEA 113 (429)
T ss_dssp CCEECCSSSC----SSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred CEEEecCCCC----CCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHH
Confidence 4667777765 6678999999999998752 234788777899999999999988777667888 99999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC--------CccCChhhHHHhhccCceEEEEeCC
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK--------RWEVDLDGVEALADENTVAIVIINP 157 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~l~~p 157 (387)
+..++++++++||+|+++.|+|+++...++ ..|.+++.++++.++ ++.+|+++|++++++++++|++++|
T Consensus 114 ~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 191 (429)
T 1yiz_A 114 LYATIQGHVDEGDEVIIIEPFFDCYEPMVK--AAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP 191 (429)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHH--HcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence 999999999999999999999999999999 899999999986543 5678999999999888999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeC
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+||||.++|.+++++|+++|+++|+++|+||+|+++.+++.+..++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 271 (429)
T 1yiz_A 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE 271 (429)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence 99999999999999999999999999999999999988776555555553 34678999999999998999999999975
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhh-----cc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDE-----TN-EAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
++++.+..... ..++.+++.+.++..+|+. .. +.++++..++++++++.+.+.|+++ ++. +..
T Consensus 272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 341 (429)
T 1yiz_A 272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTV 341 (429)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEE
T ss_pred --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC
Confidence 67887776543 4567888899888888876 31 4668888899999999999999987 677 336
Q ss_pred CCceEEEEEecCcccc-------cCCCcHHHHHHHHHHhcCeEEEcCCccCC-------CCeEEEEeeCChHhHHHHHHH
Q 038416 310 PQGAMFVMVKLNVSML-------EDIGDDLEFCLKLAKEESVIILPGRTVGM-------KNWLRIAFAAEPATLEDGLER 375 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~~Ri~~~~~~e~~~~~~~~ 375 (387)
|.+|+++|++++.... ++..+..++...+++++||.+.||..|.. .+++||+++.+++++++++++
T Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~ 421 (429)
T 1yiz_A 342 PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI 421 (429)
T ss_dssp CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHH
T ss_pred CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHH
Confidence 7788999998864210 00013456777777778999999987752 579999999899999999999
Q ss_pred HHHHHH
Q 038416 376 IKAFCQ 381 (387)
Q Consensus 376 l~~~~~ 381 (387)
|+++++
T Consensus 422 l~~~l~ 427 (429)
T 1yiz_A 422 LRKWKG 427 (429)
T ss_dssp HHHHSC
T ss_pred HHHhcc
Confidence 988764
No 31
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=9.4e-45 Score=344.17 Aligned_cols=353 Identities=16% Similarity=0.189 Sum_probs=287.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT----AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
+.+++++.|++ +++.++.+.+++.+++.. .....|++..+..+||+.+++++. ++.++++++|++|+|++
T Consensus 69 ~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~ 142 (449)
T 3qgu_A 69 AKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSK 142 (449)
T ss_dssp CCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHH
T ss_pred CCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHH
Confidence 35677778765 889999999999998874 234578887899999999999997 66677889999999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce----------eeeeccCCCCCccCChhhHHHhhccCceEEE
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE----------ARHYDLLPEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
+++..+ ..++++||+|+++.|+|.++...+. ..|.+ +..++++.++++..+++++ +++++|+
T Consensus 143 ~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~--~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~ 214 (449)
T 3qgu_A 143 CDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV--MMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIF 214 (449)
T ss_dssp HHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH--HHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEE
T ss_pred HHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH--HcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEE
Confidence 999998 8888999999999999999999999 88888 8888887655555565432 5789999
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
+++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.|+++|+|+||+
T Consensus 215 l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 294 (449)
T 3qgu_A 215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294 (449)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence 9999999999999999999999999999999999999999887765556655543 456899999999999999999999
Q ss_pred EeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ 311 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 311 (387)
++++.-.......+...+..... ...+++++++.++..++......++++..++++++++.+.+.|+++ ++.+. .+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~ 372 (449)
T 3qgu_A 295 VVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVY-GGD 372 (449)
T ss_dssp ECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-ESS
T ss_pred ecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeee-CCC
Confidence 99752100000001123333322 3457888999999888876445678889999999999999999988 77743 677
Q ss_pred ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 312 GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
+++++|+.++. .+..++...+++++||.+.||..|+. .+++||++..+++++++++++|++++++
T Consensus 373 ~~~~~~~~~~~------~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 373 DAPYIWVGFPG------KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp SSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CeeEEEEECCC------CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 89999998861 25678888888888999999988865 5899999988999999999999988754
No 32
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-44 Score=338.26 Aligned_cols=362 Identities=26% Similarity=0.461 Sum_probs=295.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+... +++.++.+.+++.+.+... ...|+...+..++|+.+++++...++.++++++|++|+|+++++..
T Consensus 39 ~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~ 116 (406)
T 1xi9_A 39 KVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQL 116 (406)
T ss_dssp CCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred CEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHH
Confidence 3556667655221 4677899999999988754 2468877788999999999998877777888999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|+++|++++++++++|++++|+||||.++|.+
T Consensus 117 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~ 194 (406)
T 1xi9_A 117 IFGALLDPGDEILVPGPSYPPYTGLVK--FYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKK 194 (406)
T ss_dssp HHHHHCCTTCEEEEEESCCHHHHHHHH--HTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhCCCCCEEEEcCCCCccHHHHHH--HcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHH
Confidence 999999999999999999999999999 899999999886545677899999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCcc-EEEEecCcccccccccceEEEE--eeCCCCcccchh
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLV--TSDPNGILQNSG 245 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~s~sK~~~~~g~r~G~i~--~~~~~~~~~~~~ 245 (387)
++++|+++|+++|+++|+|++|+.+.+++ ...++..++ .++ +++++|+||.++++|+|+||++ +++.. . .+
T Consensus 195 ~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~---~~ 268 (406)
T 1xi9_A 195 TLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK-L---SE 268 (406)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT-T---HH
T ss_pred HHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchh-H---HH
Confidence 99999999999999999999999988743 333444454 456 8999999999988999999999 54210 0 04
Q ss_pred HHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 246 FVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
+++.+.......++++++.+.++..+|+.. .+++++..++++++++.+.+.|+++|++.+. .|.+++++|+.++...
T Consensus 269 l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~- 345 (406)
T 1xi9_A 269 VREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIFPKIEVGP- 345 (406)
T ss_dssp HHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBSSEECCEECSCS-
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeee-cCCeeEEEEEecCccC-
Confidence 667676554322677888999998888643 3457888899999999999999998888843 6778888887775310
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++.+
T Consensus 346 -~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~~ 405 (406)
T 1xi9_A 346 -W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERLK 405 (406)
T ss_dssp -C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC--
T ss_pred -C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 1 14567777776678999999988865 6899999998899999999999999987643
No 33
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=9.5e-44 Score=334.73 Aligned_cols=321 Identities=20% Similarity=0.284 Sum_probs=270.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhc
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPYKLS-------PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAG 116 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~ 116 (387)
.+|++..|+.+||+++++++.+.++.... +++|++|+|+++++..++.+++++||+|+++.|+|+++...++
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~- 150 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH- 150 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHG-
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-
Confidence 36888899999999999999887776553 3799999999999999999999999999999999999999999
Q ss_pred cCCCceeeeeccCCCCCccCChhhHHHhhc------------cCceEEEE-eCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 117 SNNNLEARHYDLLPEKRWEVDLDGVEALAD------------ENTVAIVI-INPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 117 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~l-~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
..|.+++.++++.+ ++|+++|+++++ +++++|++ ++|+||||.++|.+++++|+++|++||++
T Consensus 151 -~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~ 226 (425)
T 2r2n_A 151 -PLGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226 (425)
T ss_dssp -GGTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCE
T ss_pred -HcCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 99999999987532 589999999886 35777765 68899999999999999999999999999
Q ss_pred EeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcch
Q 038416 184 VIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVT 262 (387)
Q Consensus 184 li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 262 (387)
+|+||+|+++.+++....++..++..+++++++|+||.++ +|+|+||+++++ ++++.+..... ...++++
T Consensus 227 li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~ 297 (425)
T 2r2n_A 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPST 297 (425)
T ss_dssp EEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSCH
T ss_pred EEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCCH
Confidence 9999999999888766666766766678999999999997 999999999986 78888877653 4567889
Q ss_pred HHHHHHHHHhhhcc----HHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHH
Q 038416 263 FIQAAVPRIVDETN----EAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLK 337 (387)
Q Consensus 263 ~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (387)
+.|.++..+|+... ..++++..+.++++++.+.+.|++ +|++..+..|.+|+|+|++++.. .+..+++..
T Consensus 298 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~~ 372 (425)
T 2r2n_A 298 FNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIEE 372 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHHT
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHHH
Confidence 99999998887522 356778888999999999999987 67763244788999999998642 134454445
Q ss_pred HHHhcCeEEEcCCccCC-----CCeEEEEee-CChHhHHHHHHHHHHHHHHh
Q 038416 338 LAKEESVIILPGRTVGM-----KNWLRIAFA-AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 338 ll~~~gi~v~~g~~~~~-----~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+.++||.+.||..|+. .+++||+++ .+++++++++++|++++++.
T Consensus 373 ~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 373 KAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp HHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 55778999999998864 479999997 78999999999999998764
No 34
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.8e-43 Score=326.95 Aligned_cols=336 Identities=24% Similarity=0.400 Sum_probs=283.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++.+.+... ...|++..+..++|+.+++++.+.++.++++++|++|+|+++++..
T Consensus 30 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (370)
T 2z61_A 30 KVIHLEIGEP----DFNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFF 104 (370)
T ss_dssp CCEECCCCSC----SSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHH
T ss_pred CEEEccCCCC----CCCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHH
Confidence 4566777766 5667899999999998754 3478877789999999999999888877888999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.++ +|+++|++++++++++|++++|+||||.++|.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~v~--------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 174 (370)
T 2z61_A 105 ALSSIIDDGDEVLIQNPCYPCYKNFIR--FLGAKPVFCD--------FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE 174 (370)
T ss_dssp HHHHHCCTTCEEEEESSCCTHHHHHHH--HTTCEEEEEC--------SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHH--HcCCEEEEeC--------CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH
Confidence 999999999999999999999999999 8999988876 589999999988899999999999999999966
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
|.++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+||.++++|+|+||+++++ +++
T Consensus 175 ----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 241 (370)
T 2z61_A 175 ----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND--------EII 241 (370)
T ss_dssp ----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH--------HHH
T ss_pred ----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH--------HHH
Confidence 89999999999999999999887663 33444442 34578999999999988999999999976 688
Q ss_pred HHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 248 DSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.+..... ..++++++.+.++..+|+...+.++++..++++++++.+.+.|+++ ++.+. .|.+++++|+.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~---- 315 (370)
T 2z61_A 242 EAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVN-NPIGAYYVFPNIGE---- 315 (370)
T ss_dssp HHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCC-CCCBTTEECCBCSS----
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeec-CCCcceEEEEecCC----
Confidence 87776543 4467888899988888874125678888999999999999999988 77743 67788888887763
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++
T Consensus 316 ---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 316 ---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp ---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 3567777776577999999988874 689999999899999999999988774
No 35
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=8.9e-44 Score=335.82 Aligned_cols=350 Identities=18% Similarity=0.229 Sum_probs=278.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC----CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT----AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
.++++|.|++ +++.++.+.+++++++.. ....+|++..+..+||+.+++|+.+ ++++++++|++|+|+++
T Consensus 57 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~ 130 (432)
T 3ei9_A 57 QVISLGIGDT----TEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDGAKC 130 (432)
T ss_dssp CCEECSSCCC----CSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESCHHH
T ss_pred CeEEccCCCC----CCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCChHH
Confidence 5678888866 789999999999998873 2234788778999999999999974 45667899999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
++..+ ..++++||.|+++.|+|+++...++ ..|. ++..++++.+.++..+++. .++++++
T Consensus 131 al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v 202 (432)
T 3ei9_A 131 DISRL-QVMFGSNVTIAVQDPSYPAYVDSSV--IMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDII 202 (432)
T ss_dssp HHHHH-HHHHCTTCCEEEEESCCTHHHHHHH--HHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEE
T ss_pred HHHHH-HHHcCCCCEEEEeCCCCHHHHHHHH--HcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCEE
Confidence 99975 6777899999999999999988877 5553 5777777655455555443 3578999
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.+. ++..+. ..++++++.|+||.|+++|+|+||
T Consensus 203 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~ 281 (432)
T 3ei9_A 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-SIFEIPGAEEVAMETASFSNYAGFTGVRLGW 281 (432)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS-SGGGSTTGGGTEEEEEESHHHHCTTTTCCEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC-ChhhcCCCCCeEEEEecchhccCCcccceEE
Confidence 999999999999999999999999999999999999999988765433 333332 245789999999999999999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+++++.........+.+.+..... ...+++++++.++..++......++++..++++++++++.+.|+++ ++.+. .+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 359 (432)
T 3ei9_A 282 TVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVY-GG 359 (432)
T ss_dssp EECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-EC
T ss_pred EEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cceec-CC
Confidence 999762100000012566655433 3456788899988888875445678899999999999999999988 77733 56
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.+++|+|+.++. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++.-+
T Consensus 360 ~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 360 KNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYK 426 (432)
T ss_dssp SSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred CcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhh
Confidence 778899998872 25667888888888999999998875 689999998899999999999987644
No 36
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=7.4e-44 Score=330.91 Aligned_cols=340 Identities=26% Similarity=0.421 Sum_probs=281.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++.+++.. ...|+...+..++|+.+++++ ++++++|++|+|+++++..
T Consensus 26 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a~~~ 93 (381)
T 1v2d_A 26 GAVNLGQGFP----SNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF------AVEPESVVVTSGATEALYV 93 (381)
T ss_dssp TCEECCCCSC----SSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH------TSCGGGEEEESSHHHHHHH
T ss_pred CeEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc------CCChhhEEEcCChHHHHHH
Confidence 3567777766 677899999999999875 457887778999999999998 5677899999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC--CCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL--PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
++.++.++||+|+++.|+|+++...++ ..|.+++.++++ + .++.+|+++|++++++++++|++++|+||||.++|
T Consensus 94 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~ 170 (381)
T 1v2d_A 94 LLQSLVGPGDEVVVLEPFFDVYLPDAF--LAGAKARLVRLDLTP-EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFG 170 (381)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHH--HTTCEEEEEECEEET-TEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHH--HcCCEEEEEeCCCCC-ccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccC
Confidence 999999999999999999999999988 899999999875 2 24678999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|+++|+++|+++|+|++|+++.+ +....++..+ ..+.++++.|+||.++++|+|+||+++++ ++
T Consensus 171 ~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------~~ 240 (381)
T 1v2d_A 171 ERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPK--------EF 240 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCT--------TT
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCH--------HH
Confidence 99999999999999999999999999877 4433444433 34578999999999999999999999965 57
Q ss_pred HHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 247 VDSIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
++.+..... ..++++++.+.++..+|+... +.++++..++++++++++.+.|++. ++.+. .+.+++++|++++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~- 317 (381)
T 1v2d_A 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVY-VPEGTYFLMAELPGW- 317 (381)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-CCSBSSEEEEECTTC-
T ss_pred HHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-CCCcceEEEEecChH-
Confidence 777765543 356778888888888887532 4567888899999999999999986 77744 677788999888631
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC----CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM----KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ +..+++++||.+.||..|.. .+++||+++.+++++++++++|++++++.+.
T Consensus 318 -----~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 318 -----D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp -----C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred -----h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 2 45566788999999988864 6799999988999999999999999887765
No 37
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.7e-44 Score=336.32 Aligned_cols=354 Identities=19% Similarity=0.248 Sum_probs=290.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCC-CCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYK-LSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~a 85 (387)
.+++++.|.|. +...+++.+.+++.+++... ....|++..+..++|+.+++++.++++.. +++++|++|+|++++
T Consensus 44 ~~idl~~g~~~--~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~a 121 (425)
T 1vp4_A 44 DAISFGGGVPD--PETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQA 121 (425)
T ss_dssp TCEECCCCSCC--GGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHH
T ss_pred CceeCCCCCCC--cccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHH
Confidence 45666666651 12346789999999988652 12478877789999999999997765655 678899999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--------CceEE-EEeC
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--------NTVAI-VIIN 156 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v-~l~~ 156 (387)
+..++.+++++||+|+++.|+|+++...++ ..|.+++.++++++ ++|+++|++++++ ++++| ++++
T Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 122 LDLIGKLFLDDESYCVLDDPAYLGAINAFR--QYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCHHHHHHHH--TTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHH--HcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 999999999999999999999999999999 99999999988542 4899999998875 67887 5789
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++..++++++.|+||.|+ +|+|+||+++++
T Consensus 197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~ 275 (425)
T 1vp4_A 197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSK 275 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCH
Confidence 9999999999999999999999999999999999998887765555655555567899999999998 999999999975
Q ss_pred CCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhhc-CC---CCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDET-NEAFFAKIIGLLKETADICYERIKE-IP---CITCPVKP 310 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~~---~~~~~~~~ 310 (387)
++++.+..... .+.+++++.+.++..+|+.. .+.++++..++++++++.+.+.|++ +| ++. +..|
T Consensus 276 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~-~~~~ 346 (425)
T 1vp4_A 276 --------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVK-WVKS 346 (425)
T ss_dssp --------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCE-ECCC
T ss_pred --------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE-EecC
Confidence 67787776543 34567888999999888764 2567788889999999999999987 45 577 3368
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEeeC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFAA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+|+|+|++++.. .+..++...++++ ||.+.||..|. ..+++||+++. +++++++++++|+++++++.+
T Consensus 347 ~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 347 EGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp SBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8899999998641 1344677777655 99999998875 35799999976 789999999999999987654
No 38
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6e-43 Score=327.75 Aligned_cols=350 Identities=24% Similarity=0.357 Sum_probs=290.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++ +.+... ...|++..+..++|+.+++++...++.++++++|++|+|+++++..
T Consensus 44 ~~i~l~~~~~----~~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~ 117 (409)
T 2gb3_A 44 RIHHLNIGQP----DLKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILF 117 (409)
T ss_dssp EEEECSSCCC----CSCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHH
T ss_pred CEEeccCCCC----CCCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHH
Confidence 3566777766 667788999999 887653 3478877789999999999999888877888999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+ +++|++++++++++|++++|+||||.++|.+
T Consensus 118 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 194 (409)
T 2gb3_A 118 SFAVIANPGDEILVLEPFYANYNAFAK--IAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKD 194 (409)
T ss_dssp HHHHHCCTTCEEEEEESCCTHHHHHHH--HHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHH--HcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCCCcCHH
Confidence 999999999999999999999999988 8999999998865345555 8999999888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++++|+++|+++|+++|+|++|+.+.+++.....+..+ .+++++++|+||.++++|+|+||+++++ +++++
T Consensus 195 ~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~l~~ 265 (409)
T 2gb3_A 195 EMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKKFSACGARVGCLITRN-------EELIS 265 (409)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSC--CTTEEEEEESTTTTTCGGGCCEEEECSC-------HHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccC--CCCEEEEecchhccCCccceEEEEEECc-------HHHHH
Confidence 99999999999999999999999988765322222211 2467999999999999999999999864 14677
Q ss_pred HHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 249 SIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
.+..... .. +++++.+.++..+|+. .+.++++..+++.++++.+.+.|+++ ++.++..|.+++++|++++.
T Consensus 266 ~l~~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~----- 337 (409)
T 2gb3_A 266 HAMKLAQGRL-APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELPV----- 337 (409)
T ss_dssp HHHHHHHHSC-CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECSS-----
T ss_pred HHHHHHhccC-CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeCC-----
Confidence 7766543 33 7788899988888865 36678888999999999999999988 77741468889999988861
Q ss_pred CCcHHHHHHHHHHh-----cCeEEEcCCccCC-----CCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 328 IGDDLEFCLKLAKE-----ESVIILPGRTVGM-----KNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 328 ~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..++...++++ +||.+.||..|+. .+++||+++.+++++++++++|+++++++++
T Consensus 338 -~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 338 -EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp -SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 2466777777666 5999999988753 5799999998999999999999999988754
No 39
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=3.3e-43 Score=324.39 Aligned_cols=333 Identities=19% Similarity=0.253 Sum_probs=279.9
Q ss_pred ccccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 6 GQETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 6 g~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
|.+.+++++.+.+ .+++++.+.+++.+.+.. ...|+. .+..++|+.+++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNEN----PLGTSKKVAAIQANSSVE--TEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSC----TTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCC----CCCCCHHHHHHHHHHHHH--hhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 3345667777655 688999999999987753 346654 57899999999999 4678899999999999
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
+..++.+++++||+|+++.|+|.++...++ ..|.+++.+++++ ++.+|++++++++++++++|++++|+||||.++
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~ 172 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNAL--IEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYI 172 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHH--HHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHH--HcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCc
Confidence 999999999999999999999999999999 9999999999864 568999999999998999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchh
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSG 245 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~ 245 (387)
|.+++.++++.|++ |+++|+|++|+++.+ +.....+......++++++.|+||.++++|+|+||+++++ +
T Consensus 173 ~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~ 242 (363)
T 3ffh_A 173 ELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------E 242 (363)
T ss_dssp CHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------H
T ss_pred CHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------H
Confidence 99999999998887 999999999998877 5444444444556789999999999999999999999965 7
Q ss_pred HHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 246 FVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
+++.+..... .++++++.+.++..+++. ..++++..++++++++.+.+.|++++++. + .+..++|+|++++.
T Consensus 243 ~~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~--- 314 (363)
T 3ffh_A 243 IIRQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI--- 314 (363)
T ss_dssp HHHHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS---
T ss_pred HHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC---
Confidence 8888877654 567889999999998874 47788899999999999999999966887 4 35557788988863
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+..++...+. ++||.+.+|..|+.++++||+++ ++++++++++.|+++
T Consensus 315 ----~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 315 ----EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp ----CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 4566767664 56999999999988899999998 889999999998875
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.6e-43 Score=334.67 Aligned_cols=350 Identities=18% Similarity=0.185 Sum_probs=291.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ ++++++.+.+++.+.+......+|++..+..++|+.+++++++.++..+++++|++|+|+++++..
T Consensus 45 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~ 120 (437)
T 3g0t_A 45 KFCRMEMGVP----GLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV 120 (437)
T ss_dssp CCEECCCCSC----CSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred CEEeccCcCC----CCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHH
Confidence 4677778776 678999999999999875443578887888999999999999888877889999999999999999
Q ss_pred HHHhhc--CCCC--eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh-ccCceEEEEeCCCCCccc
Q 038416 89 SLSVLA--RPGA--NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA-DENTVAIVIINPGNPCGN 163 (387)
Q Consensus 89 ~~~~l~--~~g~--~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~ 163 (387)
++.+++ ++|| +|+++.|+|.++...++ ..|.+++.++++ .+++.+|+++|++++ ++++++|++++|+||||.
T Consensus 121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~--~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~ 197 (437)
T 3g0t_A 121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCR--ILGQKFESFDLF-EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQ 197 (437)
T ss_dssp HHHHHTTSCTTCSCCEEEEESCCHHHHHHHH--HHTCCCEEEEGG-GGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCC
T ss_pred HHHHHhcCCCCCccEEEEeCCCcHhHHHHHH--HcCCEEEEEeec-CCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCC
Confidence 999998 9999 99999999999999999 999999999986 456678999999999 778999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc----cc-cccCC-CccEEEEecCcccccccccceEEEEeeCC
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV----PM-GVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~----~~-~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
++|.+++++|+++|+++|+++|+|++|+.+.+.+.... ++ ..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 198 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~- 276 (437)
T 3g0t_A 198 CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG- 276 (437)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH-
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH-
Confidence 99999999999999999999999999998877632211 11 33332 5678999999999999999999999975
Q ss_pred CCcccchhHHH-H-----------------HHhhhh-ccCCcchHHHHHHHHHhhhccHHH---HHHHHHHHHHHHHHHH
Q 038416 238 NGILQNSGFVD-S-----------------IKGCLN-AASHPVTFIQAAVPRIVDETNEAF---FAKIIGLLKETADICY 295 (387)
Q Consensus 238 ~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~ 295 (387)
++++ . +..... ...+++++.+.++..+++.. +.+ +++..++++++++.+.
T Consensus 277 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~ 348 (437)
T 3g0t_A 277 -------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-NDGEYNFRDSVIEYGRKARIMK 348 (437)
T ss_dssp -------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-HTTSCCHHHHHHHHHHHHHHHH
T ss_pred -------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-HhHHHHHHHHHHHHHHHHHHHH
Confidence 6666 5 555432 45678889999999888752 223 7888999999999999
Q ss_pred HHhhcCCCCCCCC-----CC-CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCC--CeEEEEeeC-Ch
Q 038416 296 ERIKEIPCITCPV-----KP-QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMK--NWLRIAFAA-EP 366 (387)
Q Consensus 296 ~~l~~~~~~~~~~-----~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~Ri~~~~-~~ 366 (387)
+.|+++ ++.+.. .| .+++++|+.++. .+..++...+. ++||.+.||..|+.. +++||+++. ++
T Consensus 349 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~ 420 (437)
T 3g0t_A 349 KMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPE 420 (437)
T ss_dssp HHHHTT-TEEESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCG
T ss_pred HHHHHc-CCEEeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCH
Confidence 999998 777330 24 789999998862 25667777775 459999999887653 789999975 89
Q ss_pred HhHHHHHHHHHHHHHH
Q 038416 367 ATLEDGLERIKAFCQR 382 (387)
Q Consensus 367 e~~~~~~~~l~~~~~~ 382 (387)
+++++++++|++++++
T Consensus 421 e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 421 SQFPDLEKRLQMLNAE 436 (437)
T ss_dssp GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988764
No 41
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-43 Score=328.91 Aligned_cols=346 Identities=13% Similarity=0.093 Sum_probs=270.8
Q ss_pred ccccCCCCCCC-CCCCCCCCcHHHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC--EEEcCChH
Q 038416 8 ETRHSPWPRRP-LGVSLLSDSTVAEDAVVDAL-RTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED--VYLTLGCS 83 (387)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~ 83 (387)
+.+++++.|.+ ..++++++++.+.++.. .. ......+|++..|.++||+++++|+.+..+..+++++ +++|.|++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~ 107 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGT 107 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchH
Confidence 45788989974 22345678999999987 54 3334568999999999999999999776655556665 58999999
Q ss_pred HHHHHHHHhhcC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCC-C
Q 038416 84 QAIEISLSVLAR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINP-G 158 (387)
Q Consensus 84 ~a~~~~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p-~ 158 (387)
+|+..++.++.. + |+|++++|+|.+|...++ ..|.+++.+++..++++++|++++++++++ .+++++++.| |
T Consensus 108 ~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~ 184 (405)
T 3k7y_A 108 GAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIE--SRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCY 184 (405)
T ss_dssp HHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHH--TTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSC
T ss_pred HHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHH--HcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 999999999987 8 999999999999999999 999999999985455689999999998864 5677777665 8
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC--Ccccccc-CCCccEEEEecCcccccccccceEEEEee
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP--YVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~--~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
||||.+++.+++++|+++|+++++++|+||+|.++.+++.. ..++..+ ...+++++++||||.|+++|+|+||+++.
T Consensus 185 NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~ 264 (405)
T 3k7y_A 185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIV 264 (405)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEE
Confidence 99999999999999999999999999999999998875421 1122222 22368999999999999999999999753
Q ss_pred CCCCcccchhHHHHHH----hhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhh----cC
Q 038416 236 DPNGILQNSGFVDSIK----GCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIK----EI 301 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~----~~ 301 (387)
.+ ++++++.+. ... .....++.++|.++..++.+.. .+.+.+..++++++++.+.+.|+ ++
T Consensus 265 ~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~ 339 (405)
T 3k7y_A 265 CK-----NQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKY 339 (405)
T ss_dssp CS-----SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred eC-----CHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 21 124554443 221 2334566788888888887531 23456667789999999999998 76
Q ss_pred C---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHH
Q 038416 302 P---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIK 377 (387)
Q Consensus 302 ~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~ 377 (387)
+ +|. +..|++|+|+|+.++. +++..| +++||.+.||. |||++ .++++++.++++|+
T Consensus 340 g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~ 399 (405)
T 3k7y_A 340 NLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG--------RINVSGITKNNVDYIADKIC 399 (405)
T ss_dssp TCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHH
T ss_pred CCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC--------eEEEeccCHHHHHHHHHHHH
Confidence 3 266 4478999999987642 344556 88899999973 99995 68999999999999
Q ss_pred HHHHH
Q 038416 378 AFCQR 382 (387)
Q Consensus 378 ~~~~~ 382 (387)
++++.
T Consensus 400 ~~~~~ 404 (405)
T 3k7y_A 400 LSLSQ 404 (405)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 98764
No 42
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=6.5e-43 Score=327.38 Aligned_cols=354 Identities=21% Similarity=0.335 Sum_probs=289.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++++.|.+. +...+++.+.+++.+++... ... |++..+..++|+.+++++.+.+|.++++++|++|+|+++++
T Consensus 35 ~~idl~~g~~~--~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~ 111 (407)
T 2zc0_A 35 KLISLAAGDPD--PELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGAL 111 (407)
T ss_dssp CCEECCSCCCC--TTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHH
T ss_pred ceEeCCCCCCC--chhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHH
Confidence 35566666651 12336789999999988753 234 87777899999999999987777667889999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----c--CceEE-EEeCCCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----E--NTVAI-VIINPGN 159 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~--~~~~v-~l~~p~n 159 (387)
..++.+++++||+|+++.|+|+++...+. ..|.+++.++++++ ++|+++|+++++ + ++++| ++++|+|
T Consensus 112 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~n 186 (407)
T 2zc0_A 112 DLLGRVLIDPGDVVITENPSYINTLLAFE--QLGAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186 (407)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHH--TTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHH--HcCCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCC
Confidence 99999999999999999999999999999 99999999987542 489999999887 5 67777 5778999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
|||.++|.+++++|+++|+++|+++|+|++|+.+.+.+....++..++..+++++++|+||.++ +|+|+||+++++
T Consensus 187 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--- 262 (407)
T 2zc0_A 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--- 262 (407)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH---
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCH---
Confidence 9999999999999999999999999999999998887665555666655567899999999998 999999999865
Q ss_pred cccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-H-HHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEE
Q 038416 240 ILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN-E-AFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMF 315 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~ 315 (387)
++++.+..... ...+++++.+.++..+++... + .++++..++++++++.+.+.|++ +|++.+. .|.++++
T Consensus 263 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~ 336 (407)
T 2zc0_A 263 -----EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFT-KPIAGMF 336 (407)
T ss_dssp -----HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBC-CCSBSSE
T ss_pred -----HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEe-cCCCcEE
Confidence 67887776543 345668888998888887642 3 56777888889999999999987 5777743 6788899
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEeeC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFAA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+|++++.. .+..++...+++++||.+.||..|. ..+++||+++. +++++++++++|+++++++.+
T Consensus 337 ~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 337 VMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp EEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred EEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99988641 1456777777666699999998875 35799999976 789999999999999987654
No 43
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=6.7e-44 Score=336.43 Aligned_cols=348 Identities=16% Similarity=0.212 Sum_probs=282.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHH--HHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC---EEEcCChH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVA--EDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED---VYLTLGCS 83 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~---i~~~~g~~ 83 (387)
.+++++.|.+. +++.++.+ .+++.+.+......+|++..|..++|+.+++++.+.. .++++++ |++|+|++
T Consensus 48 ~~i~l~~g~~~---~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~ 123 (430)
T 2x5f_A 48 TTYNATIGMAT---NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALT 123 (430)
T ss_dssp CSEECCCSSCE---ETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHH
T ss_pred CcEEeeeeecc---CCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCch
Confidence 45677777552 34445555 6666665543234588887789999999999997764 5667788 99999999
Q ss_pred HHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccC-CCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCC
Q 038416 84 QAIEISLSVLARPGANILIPRPGYPLYEIHAAGSN-NNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGN 159 (387)
Q Consensus 84 ~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~n 159 (387)
+++..++.+++++||+|+++.|+|+++...++ . .|.+++.++++.++ +.+|++++++++++ +++++++++|+|
T Consensus 124 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~--~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~n 200 (430)
T 2x5f_A 124 HGLSLVGDLFVNQDDTILLPEHNWGNYKLVFN--TRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNN 200 (430)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHHHHT--TTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred HHHHHHHHHHhCCCCEEEEcCCcCccHHHHHH--HhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence 99999999999999999999999999999999 8 99999999886533 67899999999876 789999999999
Q ss_pred CccccCCHHHHHHHHHHHHh-----cCcEEeecccccccccCCCCCcccc-ccCC-Ccc---EEEEecCcccccccccce
Q 038416 160 PCGNVFSYQHLQKIARTARN-----LGIIVIADEVYNHLAFGSTPYVPMG-VFGS-IVP---VITLGSISKRWIVPGWRL 229 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~-----~~~~li~D~~~~~~~~~~~~~~~~~-~~~~-~~~---~~~i~s~sK~~~~~g~r~ 229 (387)
|||.++|.+++++|+++|++ +|+++|+|++|+++.+++.+..++. .+.. .++ +++++|+||.|+++|+|+
T Consensus 201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 280 (430)
T 2x5f_A 201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRV 280 (430)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCe
Confidence 99999999999999999999 9999999999999888765444443 4432 456 899999999999999999
Q ss_pred EEEEe---eCCCCcccchhHHHHHHhhhh-----ccCCcchHHHHHHHHHhh-hcc-HHHHHHHHHHHHHHHHHHHHHhh
Q 038416 230 GWLVT---SDPNGILQNSGFVDSIKGCLN-----AASHPVTFIQAAVPRIVD-ETN-EAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 230 G~i~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
||+++ ++ ++++.+..... ..++++++.+.++..+|+ ... ...+++..++++++++.+.+.|+
T Consensus 281 G~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 281 GFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp EEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 54 67777765532 356788999999999987 631 22334488889999999999998
Q ss_pred ----cCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHH
Q 038416 300 ----EIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLE 374 (387)
Q Consensus 300 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~ 374 (387)
++ ++. +..+.+|+|+|+.++. .+..++...+++++||.+.|| ..+++||+++ .++++++++++
T Consensus 353 ~~~~~~-g~~-~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~ 420 (430)
T 2x5f_A 353 ADQYHS-HWQ-AYDFNSGYFMAIKVHD------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFD 420 (430)
T ss_dssp CGGGTT-TEE-ECCCCBSSEEEEEESS------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHH
T ss_pred hhCCCC-Cce-eeCCCceEEEEeCCCC------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHH
Confidence 55 676 4467888899998861 156678787766579999998 3679999997 78899999999
Q ss_pred HHHHHHHHh
Q 038416 375 RIKAFCQRH 383 (387)
Q Consensus 375 ~l~~~~~~~ 383 (387)
+|+++++++
T Consensus 421 ~l~~~l~~~ 429 (430)
T 2x5f_A 421 SIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998875
No 44
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=9.2e-43 Score=328.49 Aligned_cols=346 Identities=18% Similarity=0.331 Sum_probs=276.8
Q ss_pred CcHHHHHHHHHHhcC----------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCC--CCCCCEEEcCChHHHHHHHHHhh
Q 038416 26 DSTVAEDAVVDALRT----------AHYNCYSPTLGVPSARRGIADYLNRDLPYK--LSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~----------~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~--~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
.++.+.+++.+.... .....|++..|..++|+.+++++++.++.. +++++|++++|+++++..+++++
T Consensus 49 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~ 128 (428)
T 1iay_A 49 CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCL 128 (428)
T ss_dssp SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHh
Confidence 456888888754310 113478877789999999999998877754 67899999999999999999999
Q ss_pred cCCCCeEEEcCCCCcchHHHh-hccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCC
Q 038416 94 ARPGANILIPRPGYPLYEIHA-AGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~ 166 (387)
+++||+|+++.|+|+++...+ . ..|.+++.++++.++++.+|++++++++++ ++++|++++|+||||.++|
T Consensus 129 ~~~gd~Vl~~~p~y~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~ 206 (428)
T 1iay_A 129 ADPGDAFLVPSPYYPAFNRDLRW--RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLD 206 (428)
T ss_dssp CCTTCEEEEESSCCTTHHHHTTT--TTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC
T ss_pred CCCCCeEEEccCCCcchHHHHHH--hcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCC
Confidence 999999999999999987643 4 579999999886555678899999998863 6888999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--------CccEEEEecCcccccccccceEEEEeeCCC
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--------IVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
.+++++|+++|+++|+++|+||+|+++.+.+..+.++..+.. .++++++.|+||.|+++|+|+||+++++
T Consensus 207 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~-- 284 (428)
T 1iay_A 207 KDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN-- 284 (428)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC--
T ss_pred HHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCC--
Confidence 999999999999999999999999998876654444433332 3678999999999999999999999853
Q ss_pred CcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 038416 239 GILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFV 316 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 316 (387)
+++++.+..... .++.+++++.++..+++... +.++++..+++.++++.+.+.|+++ ++. +..+.+|+|+
T Consensus 285 -----~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~ 356 (428)
T 1iay_A 285 -----DDVVNCARKMSS-FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK-CLKNNAGLFC 356 (428)
T ss_dssp -----HHHHHHHHHHHT-TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCSSSSEE
T ss_pred -----HHHHHHHHHHHh-cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCCCeeEEE
Confidence 257777765543 35678889999998888632 3467888899999999999999988 777 4356689999
Q ss_pred EEecCccccc-CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEee-CChHhHHHHHHHHHHHHHHh
Q 038416 317 MVKLNVSMLE-DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFA-AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 317 ~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~ 383 (387)
|++++..... ...+..++...+++++||.+.+|..|+. ++++||+++ .+++++++++++|++++++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 357 WMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp EEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred EEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 9988642100 0012345667776667999999988765 579999997 78999999999999988754
No 45
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=6.8e-43 Score=321.18 Aligned_cols=334 Identities=18% Similarity=0.240 Sum_probs=282.1
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+.+++++.+.+ .+++++.+.+++.+.+.. ...|+. .+..++|+.+++++ ++++++|++|+|+++++
T Consensus 15 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a~ 81 (354)
T 3ly1_A 15 TDNPIRINFNEN----PLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSEGI 81 (354)
T ss_dssp SSSCEECSSCCC----SSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHHHH
T ss_pred CCceEEccCCCC----CCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHHHH
Confidence 345666767654 788999999999998875 456754 47789999999998 46788999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeCCCCCcccc
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIINPGNPCGNV 164 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~~ 164 (387)
..++.+++++||+|+++.|+|.++...++ ..|.+++.+++++ ++.+|+++++++++ +++++|++++|+||||.+
T Consensus 82 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~ 157 (354)
T 3ly1_A 82 RAAIEAYASLEAQLVIPELTYGDGEHFAK--IAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI 157 (354)
T ss_dssp HHHHHHHCCTTCEEEEESSSCTHHHHHHH--HTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC
T ss_pred HHHHHHHhCCCCeEEECCCCchHHHHHHH--HcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999 9999999998853 47899999999998 789999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCC-ccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI-VPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
+|.+++++|+++| ++|+++|+|++|+.+.+.+.....+...... +++++++|+||.++++|+|+||+++++
T Consensus 158 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------- 229 (354)
T 3ly1_A 158 TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP------- 229 (354)
T ss_dssp CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH-------
T ss_pred cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH-------
Confidence 9999999999999 8999999999999988776544444434444 678999999999999999999999865
Q ss_pred hhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcc
Q 038416 244 SGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVS 323 (387)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (387)
++++.+...... ++++++.+.++..+++. ..++++..++++++++.+.+.|+++ ++. + .+..|+|+|+.++.
T Consensus 230 -~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~- 301 (354)
T 3ly1_A 230 -TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV- 301 (354)
T ss_dssp -HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS-
T ss_pred -HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC-
Confidence 788888776553 68889999999998885 3778889999999999999999988 677 3 35567788988863
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
+..++...+ .++||.+. |..++.++++||+++ ++++++++++.|++++++
T Consensus 302 ------~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 ------PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ------CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 355676666 46799998 776667899999987 688999999999998875
No 46
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.6e-43 Score=323.66 Aligned_cols=332 Identities=16% Similarity=0.191 Sum_probs=278.1
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++.+.+ .+++++.+.+++.+.+.. ...|+...+ .++|+.+++++ ++++++|++|+|+++++.
T Consensus 30 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~~ 96 (365)
T 3get_A 30 KEVIKLASNEN----PFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVIE 96 (365)
T ss_dssp SCCEECSSCCC----TTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHHH
T ss_pred CceEEecCCCC----CCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHHH
Confidence 45667777655 688999999999999874 457877655 89999999999 457889999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
.++.+++++||+|+++.|+|.++...++ ..|.+++.+++ ..+++ +|++++++++++++++|++++|+||||.++|.
T Consensus 97 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 172 (365)
T 3get_A 97 FAIHSKLNSKNAFLQAGVTFAMYEIYAK--QCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDA 172 (365)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHH--HHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhCCCCEEEEeCCChHHHHHHHH--HcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence 9999999999999999999999999999 89999999987 34567 99999999999899999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeeccccccccc--CCCC-CccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAF--GSTP-YVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~--~~~~-~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
+++++++++| ++|+++|+|++|+.+.+ .+.. ...+...+..+++++++|+||.++++|+|+||+++++
T Consensus 173 ~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------- 243 (365)
T 3get_A 173 SEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA-------- 243 (365)
T ss_dssp HHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------
T ss_pred HHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------
Confidence 9999999999 57999999999998875 3322 2223333344678999999999999999999999965
Q ss_pred hHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 245 GFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
++++.+..... .++++++.+.++..+++. ..++++..++++++++.+.+.|+++ ++. + .+..+.|+|++++..
T Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~- 316 (365)
T 3get_A 244 NIISAFYKLRA-PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK- 316 (365)
T ss_dssp HHHHHHHHHSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS-
T ss_pred HHHHHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC-
Confidence 78888877654 356888999999999885 4778899999999999999999998 777 4 345566789888641
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+..++...+ .++||.+.+|..|+ ++++||+++ ++++++++++.|++++
T Consensus 317 -----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 -----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 455676666 45699999999888 899999998 7899999999998875
No 47
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=4.7e-43 Score=324.80 Aligned_cols=326 Identities=24% Similarity=0.388 Sum_probs=275.2
Q ss_pred HHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH
Q 038416 33 AVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI 112 (387)
Q Consensus 33 a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~ 112 (387)
++.+.+.... ..|++..+..++|+.+++++. .+++++|++|+|+++|+..++.+++++||+|+++.|+|+++..
T Consensus 47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 4445554443 478887899999999999873 3577899999999999999999999999999999999999999
Q ss_pred HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 113 HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 113 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
.+. ..|.+++.++++.++++.+|++++++++++++++|++++|+||||.++|.+++++|+++|++||+++|+|++|+.
T Consensus 121 ~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~ 198 (375)
T 3op7_A 121 IPK--SLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRS 198 (375)
T ss_dssp HHH--HTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCC
T ss_pred HHH--HcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 999 999999999987666778899999999998999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHH
Q 038416 193 LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRI 271 (387)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 271 (387)
+.+. +...+.. ..+++++++|+||.++++|+|+||+++++ ++++.++.... ...+++++.+.++..+
T Consensus 199 ~~~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (375)
T 3op7_A 199 FSEL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLA 266 (375)
T ss_dssp CSSS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHH
T ss_pred cccc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHH
Confidence 7765 2222222 23567999999999999999999999865 78888877654 4566778888888877
Q ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc
Q 038416 272 VDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT 351 (387)
Q Consensus 272 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 351 (387)
++. .+.++++..+.++++++.+.+.|++++++. +..|.+++++|+.++.. .+..+++..+++++||.+.||..
T Consensus 267 l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~ 339 (375)
T 3op7_A 267 LAH-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNR 339 (375)
T ss_dssp HHT-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGG
T ss_pred Hhc-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhh
Confidence 774 456678888888999999999999888887 44788888888877642 24667888887888999999999
Q ss_pred cCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 352 VGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 352 ~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
|+.++++|++++.+.+++++++++|.++++++.+
T Consensus 340 ~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 340 FERDGYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp GTCTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred hCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999988889999999999999988754
No 48
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.7e-42 Score=318.80 Aligned_cols=330 Identities=20% Similarity=0.277 Sum_probs=278.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCC-CCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKL-SPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a~~ 87 (387)
.+++++.+.+ +++.++.+.+++.+.+.......|+. .+..++|+.+++++ ++ ++++|++|+|+++++.
T Consensus 31 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a~~ 99 (367)
T 3euc_A 31 GLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEIIS 99 (367)
T ss_dssp TCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHHHH
T ss_pred CeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHHHH
Confidence 4556666554 78899999999999887433457776 47899999999998 34 6789999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~ 166 (387)
.++.+++++||+|+++.|+|.++...++ ..|.+++.+++++ ++.+|++++++++++ ++++|++++|+||||.+++
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 100 MLALAAARPGAKVMAPVPGFVMYAMSAQ--FAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHTCCTTCEEEEEESCSCCSCHHHH--TTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHcCCCCEEEEcCCCHHHHHHHHH--HcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999 9999999998864 568899999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHHhc--CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 167 YQHLQKIARTARNL--GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 167 ~~~~~~l~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
.+++++|+++|++| |+++|+|++|+.+...+ . ...+...++++++.|+||. +++|+|+||+++++
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~-------- 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP-------- 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH--------
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH--------
Confidence 99999999999999 99999999999866322 2 2233445678999999999 99999999999965
Q ss_pred hHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc
Q 038416 245 GFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM 324 (387)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (387)
++++.+..... .++++++.+.++..+++. ..++++..++++++++.+.+.|+++|++. + .+..++|+|+.++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 243 QWLEQLDKVRP-PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP--- 314 (367)
T ss_dssp HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence 78887776644 467889999999999886 67788999999999999999999998888 4 5667788898876
Q ss_pred ccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 325 LEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+ .++||.+.+|..|.. .+++||+++ ++++++++++.|+++++
T Consensus 315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 345666665 677999999987653 689999988 88999999999988753
No 49
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=7.3e-43 Score=328.18 Aligned_cols=351 Identities=16% Similarity=0.176 Sum_probs=279.1
Q ss_pred ccccccCCCCCCCC-CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 6 GQETRHSPWPRRPL-GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 6 g~~~~~~~~~~~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
|.+.+++++.|.|. .++++++++.+.+++.+..... ..+|++..|..++|+.+++++....+.. .+++|++|+|+++
T Consensus 36 g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~ 113 (418)
T 3rq1_A 36 GRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTG 113 (418)
T ss_dssp CGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHH
T ss_pred cCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChHHHHHHHHHHHhcccCcc-ccccEEECCchHH
Confidence 45567888899763 3447889999999987754322 2478887899999999999997644311 2339999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----Cce-EEEEeCC-C
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTV-AIVIINP-G 158 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~-~v~l~~p-~ 158 (387)
++..++.+++++||+|+++.|+|.++...+. ..|.+++.+++.+++ +.+|++++++++++ +++ ++++++| +
T Consensus 114 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~ 190 (418)
T 3rq1_A 114 GIHHLIHNYTEPGDEVLTADWYWGAYRVICS--DTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGN 190 (418)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCTHHHHHHH--HTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSC
T ss_pred HHHHHHHHhcCCCCEEEECCCCchhHHHHHH--HcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCC
Confidence 9999999999999999999999999999999 999999999986443 68899999998874 565 7888899 9
Q ss_pred CCccccCCHHHHHHHHHHHH------hcCcEEeecccccccccCCCCCccccc-cC-CCcc--EEEEecCcccccccccc
Q 038416 159 NPCGNVFSYQHLQKIARTAR------NLGIIVIADEVYNHLAFGSTPYVPMGV-FG-SIVP--VITLGSISKRWIVPGWR 228 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~------~~~~~li~D~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~i~s~sK~~~~~g~r 228 (387)
||||.+++.+++++|+++|+ ++|+++|+||+|.++.+.+....++.. .. ..++ +++++|+||.|+++|+|
T Consensus 191 NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 270 (418)
T 3rq1_A 191 NPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQR 270 (418)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCc
Confidence 99999999999999999999 899999999999998866532223221 11 1223 58899999999999999
Q ss_pred eEEEEe---eCCCCcccchhHHHHHHhhhh-----ccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHH
Q 038416 229 LGWLVT---SDPNGILQNSGFVDSIKGCLN-----AASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICY 295 (387)
Q Consensus 229 ~G~i~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~ 295 (387)
+||+++ ++ ++++.+..... ...+++.+++.++..++++.. ...+.+..+.++++++.+.
T Consensus 271 ~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (418)
T 3rq1_A 271 VGAMIGISDDE--------EIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFK 342 (418)
T ss_dssp CEEEEEEESSH--------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCH--------HHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 43 67777776532 124578888999888887632 1233456678888999999
Q ss_pred HHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHH
Q 038416 296 ERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLE 374 (387)
Q Consensus 296 ~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~ 374 (387)
+.|+++ ++.+ ..|.+++|+|+.++ +..++... +.++||.+.|| ++++||+++ .++++++++++
T Consensus 343 ~~L~~~-g~~~-~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~ 406 (418)
T 3rq1_A 343 QEAAQV-GLPM-LPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAE 406 (418)
T ss_dssp HHHHHH-TCCC-CCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHH
T ss_pred HHHHhc-CCCC-CCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecC-----CCCeEEEEecCCHHHHHHHHH
Confidence 999888 7874 47888999998764 45566664 57789999998 478999997 59999999999
Q ss_pred HHHHHHHHhhh
Q 038416 375 RIKAFCQRHAK 385 (387)
Q Consensus 375 ~l~~~~~~~~~ 385 (387)
+|+++++++.+
T Consensus 407 ~l~~~l~~~~~ 417 (418)
T 3rq1_A 407 KIYNAMKSLGK 417 (418)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhc
Confidence 99999987653
No 50
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=8.3e-43 Score=325.59 Aligned_cols=346 Identities=22% Similarity=0.297 Sum_probs=282.5
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+++++.|.+. +...+++.+.+++.+++... ....|++..+..++|+.+++++ ++++++|++|+|+++++.
T Consensus 34 ~i~l~~g~~~--~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~~~al~ 105 (397)
T 2zyj_A 34 ILSFAGGLPA--PELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI------GVRPEEVLITTGSQQALD 105 (397)
T ss_dssp CEEESSCCCC--GGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred ceecCCCCCC--chhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh------CCChhhEEEeccHHHHHH
Confidence 4556566541 12336789999999887642 1246877778999999999999 356789999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEE-EEeCCCCCccccC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAI-VIINPGNPCGNVF 165 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v-~l~~p~nptG~~~ 165 (387)
.++.++.++||+|+++.|+|+++...++ ..|.+++.++++++ ++|+++|++++++ ++++| ++++|+||||.++
T Consensus 106 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~---~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~ 180 (397)
T 2zyj_A 106 LVGKVFLDEGSPVLLEAPSYMGAIQAFR--LQGPRFLTVPAGEE---GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180 (397)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHH--TTCCEEEEEEEETT---EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBC
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHH--HcCCEEEecCcCCC---CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcC
Confidence 9999999999999999999999999999 99999999987542 4899999999876 77887 5789999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCC---ccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSI---VPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+ ++++++.|+||+++ +|+|+||+++++
T Consensus 181 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~------ 253 (397)
T 2zyj_A 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP------ 253 (397)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCH------
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCH------
Confidence 99999999999999999999999999988876655555555444 67899999999998 999999999975
Q ss_pred chhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CC-CCCCCCCCCceEEEEEe
Q 038416 243 NSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IP-CITCPVKPQGAMFVMVK 319 (387)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~g~~~~~~ 319 (387)
++++.+..... ...+.+++.+.++..+|+....+++++..++++++++.+.+.|++ +| ++. +..|.+|+++|++
T Consensus 254 --~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~ 330 (397)
T 2zyj_A 254 --EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVR-YTRPKGGMFVWME 330 (397)
T ss_dssp --HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEE
T ss_pred --HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-EccCCccEEEEEE
Confidence 67777776543 335568889999888888632256788888999999999999987 67 577 3367889999998
Q ss_pred cCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----CCCeEEEEeeC-ChHhHHHHHHHHHHHHHHhh
Q 038416 320 LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----MKNWLRIAFAA-EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~ 384 (387)
++.. .+..++...++++ ||.+.||..|. .++++||+++. +++++++++++|+++++++.
T Consensus 331 ~~~~-----~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 331 LPKG-----LSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp CSTT-----CCHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----CCHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8641 1456777777555 99999998875 35799999975 68999999999999998765
No 51
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3e-42 Score=325.65 Aligned_cols=351 Identities=21% Similarity=0.340 Sum_probs=281.5
Q ss_pred CCCcHHHHHHHHHHhcCCC-----------CCCCCCCCCcHHHHHHHHHHHhhcCC--CCCCCCCEEEcCChHHHHHHHH
Q 038416 24 LSDSTVAEDAVVDALRTAH-----------YNCYSPTLGVPSARRGIADYLNRDLP--YKLSPEDVYLTLGCSQAIEISL 90 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~~~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~ 90 (387)
....+.+.+++.+...... ..+|++..|..+||+.+++++.+.++ .++++++|++|+|+++++..++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~ 128 (435)
T 3piu_A 49 QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFI 128 (435)
T ss_dssp CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHH
T ss_pred cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHH
Confidence 3457778887777554221 13688888999999999999986544 4567899999999999999999
Q ss_pred HhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCcccc
Q 038416 91 SVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNV 164 (387)
Q Consensus 91 ~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~ 164 (387)
.+++++||.|+++.|+|.++...+. ...|.+++.++++++.++.+|+++|++++++ ++++|++++|+||||.+
T Consensus 129 ~~l~~~gd~vl~~~p~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~ 207 (435)
T 3piu_A 129 FCLADPGEAVLIPTPYYPGFDRDLK-WRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207 (435)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHTT-TTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC
T ss_pred HHhcCCCCeEEECCCccccHHHHHH-HhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC
Confidence 9999999999999999998876554 0378999999987666678999999999875 78899999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC----------CccEEEEecCcccccccccceEEEEe
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS----------IVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
+|.+++++|+++|++||+++|+||+|+.+.+.+..+.++..+.. .++++++.|+||.|+++|+|+||+++
T Consensus 208 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~ 287 (435)
T 3piu_A 208 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYS 287 (435)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEe
Confidence 99999999999999999999999999998888766555444322 46789999999999999999999998
Q ss_pred eCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 235 SDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
++ +++.+.+..... ....+++.+.++..++.... +.++.+..++++++++.+.+.|+++ ++.+. .+.+
T Consensus 288 ~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 357 (435)
T 3piu_A 288 ND-------DMVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCL-NGNA 357 (435)
T ss_dssp SC-------HHHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEC-CCCS
T ss_pred CC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCe
Confidence 54 246666655433 35667888888888887533 3466788889999999999999988 77743 6778
Q ss_pred eEEEEEecCcccccC-CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 313 AMFVMVKLNVSMLED-IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 313 g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
|+++|+.++...... ..+..++...+++++||.+.||..|+. ++++||+++. +++++++++++|+++++++++
T Consensus 358 g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~~ 434 (435)
T 3piu_A 358 GLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYYN 434 (435)
T ss_dssp SSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC-
T ss_pred eEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHhC
Confidence 899999987521100 002346777777777999999988754 6899999976 899999999999999988753
No 52
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.9e-42 Score=324.90 Aligned_cols=348 Identities=18% Similarity=0.210 Sum_probs=277.4
Q ss_pred ccccccCCCCCCCC-CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 6 GQETRHSPWPRRPL-GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 6 g~~~~~~~~~~~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
|.+.+++++.|++. ...++++++.+.+++.+..... ..+|++..|..++|+.+++++....+. .++++|++|+|+++
T Consensus 35 g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~la~~~~~~~~~-~~~~~i~~t~g~~~ 112 (413)
T 3t18_A 35 GREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYAPIEGEKDYRKIVIDTLFGPYKP-EGYISAIATPGGTG 112 (413)
T ss_dssp CGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCCCTTCCHHHHHHHHHHHHGGGCC-SSEEEEEEESHHHH
T ss_pred cccceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcCCCCCCHHHHHHHHHHHhcccCc-cccCcEEEcCccHH
Confidence 34567888898863 3347889999999988754322 247887789999999999998664432 24459999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----Cce-EEEEeCC-C
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTV-AIVIINP-G 158 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~-~v~l~~p-~ 158 (387)
++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++.+++ +.+|+++|++++++ +++ ++++++| |
T Consensus 113 al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~ 189 (413)
T 3t18_A 113 AIRSAIFSYLDEGDPLICHDYYWAPYRKICE--EFGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRDSDRIASLINSPGN 189 (413)
T ss_dssp HHHHHHHHHCCSSCEEEEESSCCTHHHHHHH--HHTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcccHHHHHH--HhCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhcCCCEEEEEeCCCC
Confidence 9999999999999999999999999999999 999999999985443 78999999998875 666 7788899 9
Q ss_pred CCccccCCHHHHHHHHHHHH------hcCcEEeecccccccccCCCCCccccc-cCC-Ccc--EEEEecCcccccccccc
Q 038416 159 NPCGNVFSYQHLQKIARTAR------NLGIIVIADEVYNHLAFGSTPYVPMGV-FGS-IVP--VITLGSISKRWIVPGWR 228 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~------~~~~~li~D~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~i~s~sK~~~~~g~r 228 (387)
||||.+++.+++++|+++|+ ++|+++|+||+|.++.+.+....++.. +.. .++ +++++|+||.|+++|+|
T Consensus 190 NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r 269 (413)
T 3t18_A 190 NPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLR 269 (413)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcC
Confidence 99999999999999999999 899999999999999887754444322 221 223 58889999999999999
Q ss_pred eEEEEe---eCCCCcccchhHHHHHHhhhh-----ccCCcchHHHHHHHHHhhhcc----HHHHHHHHHHHHHHHHHHHH
Q 038416 229 LGWLVT---SDPNGILQNSGFVDSIKGCLN-----AASHPVTFIQAAVPRIVDETN----EAFFAKIIGLLKETADICYE 296 (387)
Q Consensus 229 ~G~i~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~ 296 (387)
+||+++ ++ ++++.+..... ...+++.+++.++..++++.. ...+++..+.++++++.+.+
T Consensus 270 iG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 341 (413)
T 3t18_A 270 SGAAVGISSSK--------EIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVT 341 (413)
T ss_dssp CEEEEEEESCH--------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecCCH--------HHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 44 67777776532 124578888999888887532 23455677888999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHHHHH
Q 038416 297 RIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDGLER 375 (387)
Q Consensus 297 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~~~~ 375 (387)
.|+++ ++.+ ..|.+++|+|+.+. +..++...+ .++||.+.|| ++++||+++. +++++ +++
T Consensus 342 ~l~~~-g~~~-~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gv~v~~g-----~~~iRis~~~~~~~~~---l~~ 402 (413)
T 3t18_A 342 AAKEN-KLTM-IPYFGGFFTFIPTD--------KAFDIVKDL-EKENIFTIPS-----AKGIRVAICGVGEEKI---PKL 402 (413)
T ss_dssp HHHHT-TCCC-BCCCSSSCEEEECS--------CHHHHHHHH-HHTTEECEEC-----SSEEEECTTTSCGGGH---HHH
T ss_pred HHHHc-CCCc-cCCCceEEEEeCCC--------CHHHHHHHH-HhCCEEEecC-----CCceEEEEeeCCHHHH---HHH
Confidence 99988 7874 47888999998663 456676655 7789999997 5789999964 66777 888
Q ss_pred HHHHHHHhhh
Q 038416 376 IKAFCQRHAK 385 (387)
Q Consensus 376 l~~~~~~~~~ 385 (387)
|.++++++++
T Consensus 403 l~~~l~~~~~ 412 (413)
T 3t18_A 403 VQRLAFYTNK 412 (413)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 8888887764
No 53
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.4e-42 Score=326.36 Aligned_cols=345 Identities=17% Similarity=0.160 Sum_probs=272.6
Q ss_pred cccCCCCCCCCCCCCC--CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLL--SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE--DVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~ 84 (387)
.+++++.|.. .+|+. ++++.+.+++.+++.......|++..|..++|+.+++++....+..++++ +|++|+|+++
T Consensus 50 ~~i~l~~G~y-~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~ 128 (420)
T 4f4e_A 50 TKVNLGVGVY-TNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTG 128 (420)
T ss_dssp SCEECCCCSC-CCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CcEEeeeeee-ECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHH
Confidence 5678888832 12244 45599999999998875456888888999999999999976444333577 8999999999
Q ss_pred HHHHHH--HhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCC
Q 038416 85 AIEISL--SVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGN 159 (387)
Q Consensus 85 a~~~~~--~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~n 159 (387)
++..++ .+++++||+|+++.|+|.++...++ ..|.+++.+++...+++.+|++.+++.++ ++++++++++|+|
T Consensus 129 al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N 206 (420)
T 4f4e_A 129 ALKIGADFLRTLNPKAKVAISDPSWENHRALFD--MAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHN 206 (420)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHH--HTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHH--HcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 999995 4567899999999999999999999 99999999998544567899999999987 6788999999999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC-CCcccccc-CCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
|||..++.+++++|+++|+++|+++|+|++|+++.+++. ...++..+ ...++++++.|+||.|+++|+|+||+++..+
T Consensus 207 PtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~ 286 (420)
T 4f4e_A 207 PTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITD 286 (420)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcC
Confidence 999999999999999999999999999999999888642 22233332 2346789999999999999999999975321
Q ss_pred CCcccchhHHHH----HHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcC---CCC
Q 038416 238 NGILQNSGFVDS----IKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEI---PCI 304 (387)
Q Consensus 238 ~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~---~~~ 304 (387)
++++++. ++... ....+++.+.+.++..++.... +.++++..++++++++.+.+.|+++ +++
T Consensus 287 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 361 (420)
T 4f4e_A 287 -----SKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDF 361 (420)
T ss_dssp -----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred -----CHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 1244433 22222 2345567888888888777532 4567888899999999999999986 367
Q ss_pred CCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHHHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDGLERIKAFC 380 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~~~~l~~~~ 380 (387)
. +..|.+|+|+|+.++ . +.+..+++++||.+.|+. ||+++. +++++++++++|++++
T Consensus 362 ~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 362 S-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp T-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred e-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHHHh
Confidence 7 336888999997663 2 345666778899999863 999965 8888999999998876
No 54
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.2e-41 Score=312.98 Aligned_cols=321 Identities=17% Similarity=0.316 Sum_probs=260.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.+.+ .+++|+.+ ++ ....+|++. +..++|+.+++++ ++++++|++|+|+++++..
T Consensus 30 ~~i~l~~~~~----~~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~~ 90 (356)
T 1fg7_A 30 GDVWLNANEY----PTAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIEL 90 (356)
T ss_dssp CSEECSSCCC----SSCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHHH
T ss_pred ceEEeeCCCC----CCCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHHH
Confidence 3455655543 46666655 12 234678875 4899999999999 4677899999999999999
Q ss_pred HHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 89 SLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
++++++++| |+|+++.|+|+++...++ ..|.++..++++ +++.+|+++++++++ ++++|++++|+||||.++|.
T Consensus 91 ~~~~~~~~g~d~Vl~~~p~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~ 165 (356)
T 1fg7_A 91 LIRAFCEPGKDAILYCPPTYGMYSVSAE--TIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINP 165 (356)
T ss_dssp HHHHHCCTTTCEEEECSSSCTHHHHHHH--HHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHhCCCCCEEEEeCCChHHHHHHHH--HcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCH
Confidence 999999999 999999999999999999 899999988875 456789999999888 88999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++++++++|+ +|+++|+||+|+++.. + .++..+ ...++++++.|+||.|+++|+|+||+++++ ++
T Consensus 166 ~~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~ 232 (356)
T 1fg7_A 166 QDFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EV 232 (356)
T ss_dssp HHHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HH
T ss_pred HHHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HH
Confidence 99999999999 9999999999998652 1 122222 334578999999999999999999999965 78
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+..... .++++++.+.++.+++++....++++..++++++++.+.+.|++++++..+ .|..++|+|++++
T Consensus 233 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~----- 305 (356)
T 1fg7_A 233 INLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK----- 305 (356)
T ss_dssp HHHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET-----
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC-----
Confidence 888876644 346888899988888875332348888899999999999999988654323 5667889998885
Q ss_pred CCCcHHHHHHHHHHhcCeEEEc-CCccCCCCeEEEEeeCChHhHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILP-GRTVGMKNWLRIAFAAEPATLEDGLERIKA 378 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~ 378 (387)
+..++...+ .++||.+.+ |..|+.++++||+++ +++++++++++|++
T Consensus 306 ---~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 306 ---ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRA 353 (356)
T ss_dssp ---THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHh
Confidence 345677766 677999999 888877789999997 47889998888764
No 55
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=5.6e-42 Score=320.25 Aligned_cols=342 Identities=17% Similarity=0.209 Sum_probs=265.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA----HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
.+++++.|.+ ++++++.+.+++.+++... ....|++..+..++|+.+++++. ++. +++++|++|+|+++
T Consensus 34 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~ 106 (400)
T 3asa_A 34 TVINLSIGDT----TQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKV 106 (400)
T ss_dssp CCEECSSCCC----CCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHH
T ss_pred ceEeccCCCC----CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHH
Confidence 4566777665 6788999999999887641 23568776789999999999964 333 67889999999999
Q ss_pred HHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCce-eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc
Q 038416 85 AIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLE-ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN 163 (387)
Q Consensus 85 a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 163 (387)
++..++.. +++||+|+++.|+|+++...+. ..|.+ +..+++++++++..++++ + +++++|++++|+||||.
T Consensus 107 al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~l~~----~-~~~~~v~l~~p~nptG~ 178 (400)
T 3asa_A 107 DLFRLLSF-FGPNQTVAIQDPSYPAYLDIAR--LTGAKEIIALPCLQENAFFPEFPE----D-THIDILCLCSPNNPTGT 178 (400)
T ss_dssp HHHHHHHH-HCSSCEEEEEESCCHHHHHHHH--HTTCSEEEEEECCGGGTTCCCCCT----T-CCCSEEEEESSCTTTCC
T ss_pred HHHHHHHH-cCCCCEEEECCCCcHHHHHHHH--HcCCcceEecccchhcCcccChhh----c-cCccEEEEeCCCCCCCC
Confidence 99997654 5789999999999999998888 88998 888887654444444432 1 57889999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ 242 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~ 242 (387)
++|.+++++|+++|+++|+++|+|++|+++.+.+....++..++. .+++++++|+||.|+++|+|+||+++++
T Consensus 179 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~------ 252 (400)
T 3asa_A 179 VLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ------ 252 (400)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT------
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh------
Confidence 999999999999999999999999999988776543344544432 3468999999999999999999999875
Q ss_pred chhH-------HHHHHhh-h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 038416 243 NSGF-------VDSIKGC-L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA 313 (387)
Q Consensus 243 ~~~~-------~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 313 (387)
++ ++.+... . ....+++++.+.++..+++.. ++++..+.++++++.+.+.|+++ ++. +..+.++
T Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~ 325 (400)
T 3asa_A 253 --ELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GFE-VFGGEHA 325 (400)
T ss_dssp --TCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TCE-EEECSSS
T ss_pred --hhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCc
Confidence 33 3434322 1 123467888999888888753 56778888999999999999988 777 3356678
Q ss_pred EEEEEe-cCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 314 MFVMVK-LNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 314 ~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+|+|++ ++.. .+..++...+++++||.+.||..|+. ++++||++..+++++++++++|++++++.
T Consensus 326 ~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 326 PYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp SEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-----
T ss_pred eEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 899998 6531 13446777777778999999988763 57899998788999999999999888664
No 56
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=2.8e-42 Score=322.03 Aligned_cols=345 Identities=15% Similarity=0.144 Sum_probs=271.8
Q ss_pred ccccCCCCCCCCCCCC--CCCcHHHHHHHHH-HhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEcCCh
Q 038416 8 ETRHSPWPRRPLGVSL--LSDSTVAEDAVVD-ALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE--DVYLTLGC 82 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~--~~~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~ 82 (387)
+.+++++.|.. .+++ .+.++.+.+++.+ ++.......|++..|..++|+.+++++....+..++++ +|++|+|+
T Consensus 26 ~~~i~l~~g~y-~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~ 104 (397)
T 3fsl_A 26 SDKVNLSIGLY-YNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGG 104 (397)
T ss_dssp SCCEECSSCCC-CCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred CCeEEEeeeEE-ECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCc
Confidence 35678888832 1123 3455999999999 88764456888888999999999999976544334678 89999999
Q ss_pred HHHHHHHHH--hhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCC
Q 038416 83 SQAIEISLS--VLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINP 157 (387)
Q Consensus 83 ~~a~~~~~~--~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p 157 (387)
++++..+++ .++++||+|+++.|+|.++...++ ..|.+++.+++...+++.+|+++++++++ ++++++++++|
T Consensus 105 ~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p 182 (397)
T 3fsl_A 105 SGALKVGADFLKRYFPESGVWVSDPTWENHVAIFA--GAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCC 182 (397)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHH--HTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSS
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHH--HcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCC
Confidence 999999954 457899999999999999999999 99999999988545567899999999987 57788999999
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC-CCcccccc-CCCccEEEEecCcccccccccceEEEEee
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
+||||..++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+ ...+++++++|+||.++++|+|+||++++
T Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 183 HNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred CCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 99999999999999999999999999999999999887632 22233333 34567899999999999999999999864
Q ss_pred CCCCcccchhHHHHHHhh----h-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---
Q 038416 236 DPNGILQNSGFVDSIKGC----L-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP--- 302 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~--- 302 (387)
.. +++.++.+... . .....++.+++.++..++.... +.++++..++++++++.+.+.|++++
T Consensus 263 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 337 (397)
T 3fsl_A 263 CE-----DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPER 337 (397)
T ss_dssp CS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred cC-----CHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 21 12344433222 1 2344567788888888777532 46678888999999999999999864
Q ss_pred CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHHHHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDGLERIKAF 379 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~~~~l~~~ 379 (387)
++. +..|.+|+|+|+.++ . +.+..+++++||.+.||. ||+++. +++++++++++|+++
T Consensus 338 ~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 338 NFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred Cce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHhh
Confidence 576 336778999997664 2 345666788899999974 999965 888899999999875
No 57
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2.9e-41 Score=311.51 Aligned_cols=334 Identities=19% Similarity=0.260 Sum_probs=267.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|.+ +++.++.+.+++.+.+.. ...|+. .+..++|+.+++++ ++++++|++|+|+++++..
T Consensus 25 ~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 25 QLLDFSANIN----PLGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESIFT 91 (364)
T ss_dssp GSEECSSCCC----TTCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHHHH
T ss_pred ceEEeccccC----CCCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHHHH
Confidence 4667777654 567889999999998864 346765 47899999999999 4577899999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++.++ +||+|+++.|+|+++...++ ..|.+++.++++.++++.+ ++++.+.++++++++++++|+||||.++|.+
T Consensus 92 ~~~~~--~gd~vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~ 166 (364)
T 1lc5_A 92 VASGL--KPRRAMIVTPGFAEYGRALA--QSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP 166 (364)
T ss_dssp HHHHH--CCSEEEEEESCCTHHHHHHH--HTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHHHc--CCCeEEEeCCCcHHHHHHHH--HcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence 99998 67999999999999999999 8999999998865344444 5767776767889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE-eeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV-TSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~-~~~~~~~~~~~~~~ 247 (387)
++++|+++|+++|+++|+|++|+.+.+++... +..++..++++++.|+||.++++|+|+||++ +++ +++
T Consensus 167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~~~ 236 (364)
T 1lc5_A 167 LLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------AAM 236 (364)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------HHH
T ss_pred HHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------HHH
Confidence 99999999999999999999999887653222 2222334578999999999999999999999 754 677
Q ss_pred HHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 248 DSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
+.+..... .++++++.+.++..+++. ..++++..++++++++.+.+.|+++|++. + .+..|+|+|+.++.
T Consensus 237 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~----- 306 (364)
T 1lc5_A 237 ARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER----- 306 (364)
T ss_dssp HHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC-----
Confidence 77776543 567888999999998886 46788889999999999999999888887 4 34556788887753
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+..++...+. ++||.+.||..|.. ++++||+++. +++++++++.|+++++++.
T Consensus 307 --~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 307 --EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp --TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC----
T ss_pred --cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhccc
Confidence 2235666664 56999999988753 5799999864 6778888888888776653
No 58
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6.7e-43 Score=328.66 Aligned_cols=344 Identities=19% Similarity=0.168 Sum_probs=272.9
Q ss_pred ccCCCCCCCCCCCC---CCCcHHHHHHHHHHhc--C-CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 10 RHSPWPRRPLGVSL---LSDSTVAEDAVVDALR--T-AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 10 ~~~~~~~~~~~~~~---~~~~~~v~~a~~~~~~--~-~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
.++++.|.| + ++.++.+.+++.+.+. . ....+|++..|..+||+.+++++ ++++++|++|+|++
T Consensus 34 ~i~l~~g~~----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~ 103 (422)
T 3d6k_A 34 SLDLTRGKP----SAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSS 103 (422)
T ss_dssp CEECCCCSC----CHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCH
T ss_pred eEeCCCCCC----ChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchH
Confidence 678888877 5 7788788888776531 2 23568999889999999999999 46789999999999
Q ss_pred HHH--HHHHHhhcCC------------CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-C
Q 038416 84 QAI--EISLSVLARP------------GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-N 148 (387)
Q Consensus 84 ~a~--~~~~~~l~~~------------g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 148 (387)
+++ ..++.++..+ +|+|+++.|+|.++...++ ..|.+++.++++.+ ++|++++++++++ +
T Consensus 104 ~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~--~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~ 178 (422)
T 3d6k_A 104 LNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITE--HFGFEMINVPMTDE---GPDMGVVRELVKDPQ 178 (422)
T ss_dssp HHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH--HHTCEEEEEEEETT---EECHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHH--HcCCEEEecCCCCC---CCCHHHHHHHHhcCC
Confidence 997 6777777655 3479999999999999999 89999999998642 4899999999875 6
Q ss_pred ceEEE-EeCCCCCccccCCHHHHHHHHHHHH-hcCcEEeecccccc--cccCCCCCccccc----cCCCccEEEEecCcc
Q 038416 149 TVAIV-IINPGNPCGNVFSYQHLQKIARTAR-NLGIIVIADEVYNH--LAFGSTPYVPMGV----FGSIVPVITLGSISK 220 (387)
Q Consensus 149 ~~~v~-l~~p~nptG~~~~~~~~~~l~~~~~-~~~~~li~D~~~~~--~~~~~~~~~~~~~----~~~~~~~~~i~s~sK 220 (387)
+++|+ +++|+||||.++|.+++++|+++|+ ++|+++|+||+|+. +...+....++.. .+..+++++++||||
T Consensus 179 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 258 (422)
T 3d6k_A 179 VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK 258 (422)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTT
T ss_pred CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhh
Confidence 78877 6899999999999999999999999 99999999999986 4333323334422 234567999999999
Q ss_pred cccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHH
Q 038416 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN--EAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 221 ~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 297 (387)
. +++|+|+||+++++ ++++.+..... .+.+++++.|.++..+++... +.++++..+.++++++.+.+.
T Consensus 259 ~-~~~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (422)
T 3d6k_A 259 I-THAGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEI 329 (422)
T ss_dssp T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-cCcccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 89999999999875 78888876643 456788999999999887522 366777788888888888877
Q ss_pred hhc----CCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc-CCccC-----CCCeEEEEee-CCh
Q 038416 298 IKE----IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP-GRTVG-----MKNWLRIAFA-AEP 366 (387)
Q Consensus 298 l~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~~Ri~~~-~~~ 366 (387)
|++ ++++. +..|.+|+|+|++++.. +...+ ..++.++||.+.| |..|. ..+++||+++ .++
T Consensus 330 L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~ 401 (422)
T 3d6k_A 330 LDSRLSEYGVAK-WTSPTGGYFISVDVVPG------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPV 401 (422)
T ss_dssp HHHHHGGGTCEE-ECCCSBSSCEEEEESTT------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred HHHhcCcCCceE-EeCCCcceEEEEECCCC------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCH
Confidence 765 33355 34788899999998641 23344 4566788999999 45453 3579999998 689
Q ss_pred HhHHHHHHHHHHHHHHhhh
Q 038416 367 ATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 367 e~~~~~~~~l~~~~~~~~~ 385 (387)
+++++++++|+++++++.+
T Consensus 402 e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 402 AELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987653
No 59
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=4.3e-46 Score=347.22 Aligned_cols=351 Identities=18% Similarity=0.270 Sum_probs=290.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++++.|++ ++++++.+.+++.+++... ..+|++. ..++|+.+++++.+.++..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADM----DFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 5677788776 8889999999999988653 3467764 7899999999998877777788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCC-CccCChhhHHHhhc-cCceEEEEeCCCCCccccCC
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEK-RWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~ 166 (387)
++.++.++||+|+++.|+|+++...+. ..|.+++.+++.+++ +|.+|+++++++++ ++++++++++|+||||.+++
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVR--LNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWE 182 (392)
Confidence 999999999999999999999999888 899999988875333 46689999999887 67889999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC--CccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS--IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~------- 255 (392)
T 3b1d_A 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP------- 255 (392)
Confidence 999999999999999999999999999887755555555543 46789999999999999999999998651
Q ss_pred hHHHHHHhhhhcc--CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEEecC
Q 038416 245 GFVDSIKGCLNAA--SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 245 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++++.+....... .+++++.+.++..+++. .+.++++..+.++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~ 333 (392)
T 3b1d_A 256 TLCAQFKHQQLVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFS 333 (392)
Confidence 3666676654322 35678888888888874 3567888889999999999999988 78887 447888888888876
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
... .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++
T Consensus 334 ~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 334 DYG----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 421 13456777776678999999988863 578999998888999999999988775
No 60
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.2e-41 Score=318.29 Aligned_cols=348 Identities=14% Similarity=0.111 Sum_probs=270.0
Q ss_pred cccccCCCCCCCCCCC-CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChH
Q 038416 7 QETRHSPWPRRPLGVS-LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCS 83 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~ 83 (387)
.+.+++++.|.+.... ..+..+.+.+++.+........+|++..|.+++|+.+++++.+.++..+++++|++ |+|++
T Consensus 27 ~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~ 106 (401)
T 7aat_A 27 NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGT 106 (401)
T ss_dssp CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcch
Confidence 3456888898763222 23356789999888876433457888889999999999999877776667899987 99999
Q ss_pred HHHHHHHHhhc---CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCC
Q 038416 84 QAIEISLSVLA---RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINP 157 (387)
Q Consensus 84 ~a~~~~~~~l~---~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p 157 (387)
+++..++.++. ++||+|+++.|+|.++...++ ..|.++..++++..+++.+|++.+++.++ ++++++++++|
T Consensus 107 ~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p 184 (401)
T 7aat_A 107 GSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFR--DAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACA 184 (401)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHH--HTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSS
T ss_pred HHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHH--HcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCC
Confidence 99999887765 899999999999999999999 99999999998655567899997777664 57889999999
Q ss_pred CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC--CCcccccc-CCCccEEEEecCcccccccccceEEEEe
Q 038416 158 GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST--PYVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 158 ~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
|||||..++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ ...+++++++|+||.|+++|+|+||+++
T Consensus 185 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 185 HNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 99999999999999999999999999999999999887542 11222222 3346789999999999999999999997
Q ss_pred eCCCCcccchh----HHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 038416 235 SDPNGILQNSG----FVDSIKGCLN-AASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP-- 302 (387)
Q Consensus 235 ~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~-- 302 (387)
.... ++ +.+.+..... ...+++...+.++..++.+.. ..++.+..++++++++.+.+.|++++
T Consensus 265 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 339 (401)
T 7aat_A 265 ICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339 (401)
T ss_dssp ECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeCC-----HHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4211 13 3344444322 344556677777777776421 35577888899999999999998872
Q ss_pred -CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHHH
Q 038416 303 -CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAFC 380 (387)
Q Consensus 303 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~~ 380 (387)
++. +..|.+++++|+.++ .+.+..+++++||.+.|+ +||+++ .++++++++++.|++++
T Consensus 340 ~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 340 HNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp SCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence 355 336788999997553 245567778889999775 599995 56777999999998875
No 61
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.9e-42 Score=324.03 Aligned_cols=348 Identities=17% Similarity=0.131 Sum_probs=274.9
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHH--HHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAV--VDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCS 83 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 83 (387)
...+++..|.|. ...+|.++.+.+++ .+++... ...+|++..|..+||+.+++++ ++++++|++|+|++
T Consensus 33 ~~~i~~~~G~p~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~ 105 (427)
T 3ppl_A 33 NLKLDLTRGKPS-SEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDASS 105 (427)
T ss_dssp CCCEECCCCSCC-HHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSCH
T ss_pred CceEecCCCCCC-hHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCcH
Confidence 345778888771 11123344566666 5555432 3468988889999999999999 56889999999999
Q ss_pred HHH--HHHHHhhcC--C----------CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cC
Q 038416 84 QAI--EISLSVLAR--P----------GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-EN 148 (387)
Q Consensus 84 ~a~--~~~~~~l~~--~----------g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 148 (387)
+++ ..++.++++ + ||+|+++.|+|.++...++ ..|.+++.++++.+ ++|+++|+++++ ++
T Consensus 106 ~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~--~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~ 180 (427)
T 3ppl_A 106 LNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITE--RFGFEMISVPMNED---GPDMDAVEELVKNPQ 180 (427)
T ss_dssp HHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH--HTTCEEEEEEEETT---EECHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHH--HcCCEEEEeCCCCC---CCCHHHHHHHHhcCC
Confidence 999 588888876 6 8999999999999999999 99999999998643 489999999994 57
Q ss_pred ceEEEEe-CCCCCccccCCHHHHHHHHHHH-HhcCcEEeecccccccccCCCCCc--ccccc----CCCccEEEEecCcc
Q 038416 149 TVAIVII-NPGNPCGNVFSYQHLQKIARTA-RNLGIIVIADEVYNHLAFGSTPYV--PMGVF----GSIVPVITLGSISK 220 (387)
Q Consensus 149 ~~~v~l~-~p~nptG~~~~~~~~~~l~~~~-~~~~~~li~D~~~~~~~~~~~~~~--~~~~~----~~~~~~~~i~s~sK 220 (387)
+++|+++ +||||||.++|.+++++|+++| +++|+++|+||+|+.+.|.+.+.. ++..+ +..+++++++||||
T Consensus 181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 260 (427)
T 3ppl_A 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK 260 (427)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence 7887755 7799999999999999999999 999999999999999877765432 33332 24568999999999
Q ss_pred cccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHH
Q 038416 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDET--NEAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 221 ~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~ 297 (387)
. +++|+|+||+++++ ++++.+..... ...+++++.|.++..+++.. .+.++.+..+.++++++.+.+.
T Consensus 261 ~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
T 3ppl_A 261 I-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEI 331 (427)
T ss_dssp T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 89999999999875 78888877653 46778899999999988862 2466777788888888888777
Q ss_pred hhc----CCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc-CCccC-----CCCeEEEEeeC-Ch
Q 038416 298 IKE----IPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP-GRTVG-----MKNWLRIAFAA-EP 366 (387)
Q Consensus 298 l~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~~Ri~~~~-~~ 366 (387)
|++ ++++. +..|.+|+|+|++++.. +..++.. ++.++||.+.| |..|. ..+++||+++. ++
T Consensus 332 L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~ 403 (427)
T 3ppl_A 332 LDSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPV 403 (427)
T ss_dssp HHHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred HHHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCH
Confidence 754 33455 44788999999998742 3455554 45778999999 55553 35899999976 78
Q ss_pred HhHHHHHHHHHHHHHHhh
Q 038416 367 ATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 367 e~~~~~~~~l~~~~~~~~ 384 (387)
+++++++++|.+++++..
T Consensus 404 ~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 404 EELEVAMDGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-40 Score=306.18 Aligned_cols=332 Identities=19% Similarity=0.260 Sum_probs=269.0
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+.+++++.|.+ .+++++.+.+++.+.+.. ...|+. .+..++|+.+++++ ++++++|++|+|+++++
T Consensus 25 ~~~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~al 91 (361)
T 3ftb_A 25 GRELLDYSSNIN----PLGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEII 91 (361)
T ss_dssp ---CEETTCCCC----TTCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHHH
T ss_pred CCCEEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHHH
Confidence 345566767654 577899999999998875 346754 57899999999999 46788999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.++ |+|+++.|+|.++...++ ..|.+++.++++.+. .++++++++++++ ++++++++|+||||.++|
T Consensus 92 ~~~~~~~----d~vi~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 162 (361)
T 3ftb_A 92 ELSISLF----EKILIIVPSYAEYEINAK--KHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLIN 162 (361)
T ss_dssp HHHHTTC----SEEEEEESCCTHHHHHHH--HTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCC
T ss_pred HHHHHHc----CcEEEecCChHHHHHHHH--HcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCC
Confidence 9999988 899999999999999999 999999999986543 4677999999988 999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE-eeCCCCcccchh
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV-TSDPNGILQNSG 245 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~-~~~~~~~~~~~~ 245 (387)
.+++++|+++|+++|+++|+|++|+++.++ .....+......++++++.|+||.++++|+|+||++ .++ +
T Consensus 163 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~--------~ 233 (361)
T 3ftb_A 163 KEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK--------E 233 (361)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH--------H
T ss_pred HHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH--------H
Confidence 999999999999999999999999998876 333333334445678999999999999999999998 543 6
Q ss_pred HHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc
Q 038416 246 FVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML 325 (387)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (387)
+.+.++.... .++++++.+.++..+++. ..++++..++++++++.+.+.|+++|++..+ .+..|.++|+.++.
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~--- 306 (361)
T 3ftb_A 234 IAAKIKAKQN-PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRV-FSPHANFVLCRLEN--- 306 (361)
T ss_dssp HHHHHHTTSC-TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE-ECCSSSEEEEEESS---
T ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCcee-cCCCCeEEEEEcCC---
Confidence 8888876644 467888999999998885 5778899999999999999999998877612 34446678887764
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++...+.+ +||.+.||..|+. ++++||+++ ++++++++++.|+++.+
T Consensus 307 ---~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 307 ---ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp ---SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 145677777755 5999999988864 589999997 55566666666655544
No 63
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.1e-40 Score=321.24 Aligned_cols=348 Identities=19% Similarity=0.230 Sum_probs=270.5
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhc-CC-CCCC-CCCEEEcCChHHHHHHHHHh-----hc
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRD-LP-YKLS-PEDVYLTLGCSQAIEISLSV-----LA 94 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~-~~-~~~~-~~~i~~~~g~~~a~~~~~~~-----l~ 94 (387)
+++ ++.+.+++.+.+... ..|.+..|..++|+.+++++... .+ ..+. +++|++|+|+++++..++.+ ++
T Consensus 114 ~~~-~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~ 190 (533)
T 3f6t_A 114 GLN-RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLL 190 (533)
T ss_dssp CCC-HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred CcC-CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcc
Confidence 555 556666666666542 23336679999999999999665 23 3343 47999999999999999998 78
Q ss_pred CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC--CCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 95 RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP--EKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
++||+|+++.|+|.++...+. ..|.++..++++. ++++.+|+++|++++++++++|++++|+||||.++|.+++++
T Consensus 191 ~~gd~Viv~~p~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~ 268 (533)
T 3f6t_A 191 KKGDKIAINEPIFTPYLRIPE--LKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNA 268 (533)
T ss_dssp CTTCEEEEESSCCHHHHTSGG--GGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHH
T ss_pred CCcCEEEEcCCCcHHHHHHHH--HcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHH
Confidence 999999999999999999888 8899999888864 566889999999999989999999999999999999999999
Q ss_pred HHHHHH-hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH--
Q 038416 173 IARTAR-NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS-- 249 (387)
Q Consensus 173 l~~~~~-~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~-- 249 (387)
|+++|+ ++|+++|+|++|+++.++. .++.... .+++++++||||.++++|+|+||+++++..... .+++.
T Consensus 269 l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~---~li~~l~ 341 (533)
T 3f6t_A 269 IKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFD---DNIAHLD 341 (533)
T ss_dssp HHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSCHHH---HHHHTSC
T ss_pred HHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHHHHH---HHHHhcc
Confidence 999999 6899999999999887642 2332222 367899999999999999999999998631000 02221
Q ss_pred ------------------------------HHhhh-hccCCcchHHHHH----HHHHhh-----hccHHHHHHHHHHHHH
Q 038416 250 ------------------------------IKGCL-NAASHPVTFIQAA----VPRIVD-----ETNEAFFAKIIGLLKE 289 (387)
Q Consensus 250 ------------------------------~~~~~-~~~~~~~~~~~~~----~~~~l~-----~~~~~~~~~~~~~~~~ 289 (387)
++... ..+.+++++.|.+ +..++. ...+.++++..+.+++
T Consensus 342 ~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~ 421 (533)
T 3f6t_A 342 KVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSE 421 (533)
T ss_dssp HHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHH
T ss_pred hhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHH
Confidence 12222 2345677778877 334453 2345778899999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc-cc-C---------CCcHHHHHHHHHHhcCeEEEcCCccCC-CCe
Q 038416 290 TADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM-LE-D---------IGDDLEFCLKLAKEESVIILPGRTVGM-KNW 357 (387)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~-~~-~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~ 357 (387)
+++.+.+.|. + ++. +..|.+++|+|+.++... .+ + ..+..+++..+++++||.+.||..|+. .++
T Consensus 422 r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~ 498 (533)
T 3f6t_A 422 RYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGE 498 (533)
T ss_dssp HHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTE
T ss_pred HHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCE
Confidence 9999999997 6 566 447899999999875310 00 0 013557788888889999999998876 579
Q ss_pred EEEEee-CChHhHHHHHHHHHHHHHHhhh
Q 038416 358 LRIAFA-AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 358 ~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+|++++ .+++++++++++|.++++++.+
T Consensus 499 iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 499 LRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp EEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999997 5899999999999999988764
No 64
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2.8e-41 Score=316.81 Aligned_cols=346 Identities=15% Similarity=0.131 Sum_probs=273.7
Q ss_pred cccCCCCCCCC-CCCCCCCcHHHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChHH
Q 038416 9 TRHSPWPRRPL-GVSLLSDSTVAEDAVVDALRT-AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~-~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~ 84 (387)
.+++++.|.+. .....++++.+.+++.+.... .....|++..+..++|+.+++++...++..+++++|++ |+|+++
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~ 110 (412)
T 1ajs_A 31 RKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTG 110 (412)
T ss_dssp TCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHH
Confidence 46778888752 221245779999999998732 23457877789999999999999654554446789999 999999
Q ss_pred HHHHHHH--hhcCCC-----CeEEEcCCCCcchHHHhhccCCCce-eeeeccCCCCCccCChhhHHHhhcc---CceEEE
Q 038416 85 AIEISLS--VLARPG-----ANILIPRPGYPLYEIHAAGSNNNLE-ARHYDLLPEKRWEVDLDGVEALADE---NTVAIV 153 (387)
Q Consensus 85 a~~~~~~--~l~~~g-----~~vl~~~p~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~ 153 (387)
|+..+++ .++++| |+|+++.|+|+++...+. ..|.+ ++.+++.+++++.+|++++++++++ ++++++
T Consensus 111 a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~ 188 (412)
T 1ajs_A 111 ALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFT--TAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVL 188 (412)
T ss_dssp HHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHH--HTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHH--HcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEE
Confidence 9999965 445789 999999999999999999 89999 9999885446678999999998864 567888
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC--CCCccccccC-CCccEEEEecCcccccccccceE
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS--TPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLG 230 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~--~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G 230 (387)
+++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++ ....++..+. ..++++++.|+||.++++|+|+|
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 268 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVG 268 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceE
Confidence 89999999999999999999999999999999999999987764 1222333232 23578999999999999999999
Q ss_pred EEEe---eCCCCcccchh----HHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHH
Q 038416 231 WLVT---SDPNGILQNSG----FVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 231 ~i~~---~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~ 297 (387)
|+++ ++ + +++.+.... ....+++++.+.++..+|+... +.++++..++++++++.+.+.
T Consensus 269 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 340 (412)
T 1ajs_A 269 NLTVVAKEP--------DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRAR 340 (412)
T ss_dssp EEEEECSSH--------HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCH--------HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 43 4 444444422 2334468889999988888642 357788889999999999999
Q ss_pred hhcCC---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHH
Q 038416 298 IKEIP---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGL 373 (387)
Q Consensus 298 l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~ 373 (387)
|++++ ++.+. .|.+|+++|+.++ .+++..+++++||.+.|+ +||+++ .+++++++++
T Consensus 341 L~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~ 401 (412)
T 1ajs_A 341 LEALKTPGTWNHI-TDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVA 401 (412)
T ss_dssp HHHTTCSSCCHHH-HHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHH
T ss_pred HHhhCCCCCeeEE-cCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHH
Confidence 99874 36633 6778889887553 356666778889999875 599997 4899999999
Q ss_pred HHHHHHHHHh
Q 038416 374 ERIKAFCQRH 383 (387)
Q Consensus 374 ~~l~~~~~~~ 383 (387)
++|+++++++
T Consensus 402 ~~l~~~l~~~ 411 (412)
T 1ajs_A 402 TSIHEAVTKI 411 (412)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 65
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.5e-41 Score=319.69 Aligned_cols=344 Identities=20% Similarity=0.243 Sum_probs=275.1
Q ss_pred cccCCCCCCCCCCCC---CCCcHHHHHHHH--HHhcCC-CCCCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 9 TRHSPWPRRPLGVSL---LSDSTVAEDAVV--DALRTA-HYNCY-SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~---~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
..++++.|.| + +|.++.+.+++. +.+... ....| ++..|..+||+.+++++ ++++++|++|+|
T Consensus 26 ~~i~l~~g~p----~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G 95 (423)
T 3ez1_A 26 LNLNMQRGQP----ADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNN 95 (423)
T ss_dssp CCEESCCCCC----CHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSS
T ss_pred ceEecCCCCC----ChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCC
Confidence 4678888887 6 788888998886 555432 23688 77789999999999999 568899999999
Q ss_pred hHHHHH--HHHHhhcC--C---------CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh--c
Q 038416 82 CSQAIE--ISLSVLAR--P---------GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA--D 146 (387)
Q Consensus 82 ~~~a~~--~~~~~l~~--~---------g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~ 146 (387)
+++++. .++.++++ + ||+|+++.|+|.++...++ ..|.+++.++++.+ ++|+++|++++ .
T Consensus 96 ~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~v~~~~~---g~d~~~l~~~l~~~ 170 (423)
T 3ez1_A 96 SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQ--TLGFELLTVDMQSD---GPDVDAVERLAGTD 170 (423)
T ss_dssp CHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHH--HHTCEEEEEEEETT---EECHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHH--HcCCEEEeccCCCC---CCCHHHHHHHHhhC
Confidence 999998 88888877 7 5999999999999999999 99999999998643 58999999999 5
Q ss_pred cCceEEEEe-CCCCCccccCCHHHHHHHHHHH-HhcCcEEeecccccccccCC-C--CCcccccc----CCCccEEEEec
Q 038416 147 ENTVAIVII-NPGNPCGNVFSYQHLQKIARTA-RNLGIIVIADEVYNHLAFGS-T--PYVPMGVF----GSIVPVITLGS 217 (387)
Q Consensus 147 ~~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~-~~~~~~li~D~~~~~~~~~~-~--~~~~~~~~----~~~~~~~~i~s 217 (387)
+++++|+++ +|+||||.+++.+++++|+++| +++|+++|+||+|+.+.+.+ . ...++..+ +..+++++++|
T Consensus 171 ~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 250 (423)
T 3ez1_A 171 PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFAS 250 (423)
T ss_dssp TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEE
T ss_pred CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeC
Confidence 678888654 7899999999999999999999 99999999999999765544 2 22233332 34568999999
Q ss_pred CcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhh--cc-HHHHHHHHHHHHHHHHH
Q 038416 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDE--TN-EAFFAKIIGLLKETADI 293 (387)
Q Consensus 218 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~~~~~~~~ 293 (387)
+||. +++|+|+||+++++ ++++.+..... ...+++++.|.++..+++. .. +.++.+..+.++++++.
T Consensus 251 ~sK~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 321 (423)
T 3ez1_A 251 TSKI-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRA 321 (423)
T ss_dssp STTT-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHH
T ss_pred chhh-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 9999 78999999999976 78888877654 5577888999998888876 21 45677777777777777
Q ss_pred HHHHhhc----CC-CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc-CCccC-----CCCeEEEEe
Q 038416 294 CYERIKE----IP-CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP-GRTVG-----MKNWLRIAF 362 (387)
Q Consensus 294 ~~~~l~~----~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~~Ri~~ 362 (387)
+.+.|.+ ++ ++. +..|.+|+|+|+.++.. +...+ ..+++++||.+.| |..|. ..+++||++
T Consensus 322 l~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~ 393 (423)
T 3ez1_A 322 VDEVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADRV-VKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAP 393 (423)
T ss_dssp HHHHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHHH-HHHHHHTTEECCCTTTTSSTTCCSSSCEEEECC
T ss_pred HHHHHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHHH-HHHHHHCCcEEecCcccccCCCCCCCCeEEEEc
Confidence 7776654 42 255 44788999999998742 33444 4556788999999 66664 258999999
Q ss_pred eC-ChHhHHHHHHHHHHHHHHhh
Q 038416 363 AA-EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 363 ~~-~~e~~~~~~~~l~~~~~~~~ 384 (387)
+. +++++++++++|++++++..
T Consensus 394 ~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 394 TRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 75 89999999999999998765
No 66
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=6.1e-41 Score=314.99 Aligned_cols=355 Identities=19% Similarity=0.233 Sum_probs=266.7
Q ss_pred ccccCCCCCCCCCCCCCCC--cHHHHHHHHHHhcCCC----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC
Q 038416 8 ETRHSPWPRRPLGVSLLSD--STVAEDAVVDALRTAH----YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG 81 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~----~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g 81 (387)
..+++++.|.| +..+ .+.+.+++.+.+.+.. ...|++..|..++|+.+++++.+.++.++++++|++|+|
T Consensus 31 ~~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 106 (417)
T 3g7q_A 31 PGAIMLGGGNP----AHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNG 106 (417)
T ss_dssp -CCEECSCCCC----CCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESC
T ss_pred CCceEecCcCC----CCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCC
Confidence 45677878876 3322 2667777777765431 136888889999999999999888888889999999999
Q ss_pred hHHHHHHHHHhhcCCCC-----eEEEc-CCCCcchHHHhh----ccCCCceeeeeccCCCCCccCChhhHHHhhccCceE
Q 038416 82 CSQAIEISLSVLARPGA-----NILIP-RPGYPLYEIHAA----GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA 151 (387)
Q Consensus 82 ~~~a~~~~~~~l~~~g~-----~vl~~-~p~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 151 (387)
+++++..++++++++|| +|+++ .|+|+++...+. +...+..+..++.. ..++.+|+++++ +++++++
T Consensus 107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~l~--~~~~~~~ 183 (417)
T 3g7q_A 107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-QFKYHVDFEHLH--IGEETGM 183 (417)
T ss_dssp HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-EEEEECCGGGCC--CCTTEEE
T ss_pred cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-ccccccCHHHhc--cccCceE
Confidence 99999999999999987 89997 999998876543 00122333333321 124568999887 6778999
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEE
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW 231 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~ 231 (387)
+++++|+||||.++|.+++++|+++|++||+++|+|++|+.+.. +....... ....++++++.|+|| ++++|+|+||
T Consensus 184 v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~ 260 (417)
T 3g7q_A 184 ICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNPNIILCMSLSK-LGLPGSRCGI 260 (417)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESGG-GTCTTSCCEE
T ss_pred EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCCCEEEEEechh-ccCCCcceEE
Confidence 99999999999999999999999999999999999999985321 11111111 122467899999999 5999999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccH-HHHHH-HHHHHHHHHHHHHHHhhc-CCC--CC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNE-AFFAK-IIGLLKETADICYERIKE-IPC--IT 305 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~-~~~--~~ 305 (387)
+++++ ++++.+..... ...+++++.+.++..+++.... ....+ ..+.++++++.+.+.|++ +++ +.
T Consensus 261 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 332 (417)
T 3g7q_A 261 IIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCL 332 (417)
T ss_dssp EECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCE
T ss_pred EEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce
Confidence 99865 78888877654 4567788999999888876442 22333 566778888888888876 554 55
Q ss_pred CCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---------CCeEEEEeeCChHhHHHHHHHH
Q 038416 306 CPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---------KNWLRIAFAAEPATLEDGLERI 376 (387)
Q Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~~Ri~~~~~~e~~~~~~~~l 376 (387)
+..|.+|+++|+.++... .+..++...+ .++||.+.||..|.. .+++||+++.+++++++++++|
T Consensus 333 -~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l 406 (417)
T 3g7q_A 333 -IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKIL 406 (417)
T ss_dssp -EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHH
T ss_pred -eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHH
Confidence 446888999999887421 1456676666 677999999988754 4689999988999999999999
Q ss_pred HHHHHHhhhc
Q 038416 377 KAFCQRHAKK 386 (387)
Q Consensus 377 ~~~~~~~~~~ 386 (387)
+++++++.++
T Consensus 407 ~~~l~~~~~~ 416 (417)
T 3g7q_A 407 AEEIERAWRE 416 (417)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999887653
No 67
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=3.7e-41 Score=315.95 Aligned_cols=345 Identities=14% Similarity=0.134 Sum_probs=269.8
Q ss_pred cccCCCCCCCCC-CCCCCCcHHHHHHHHH-HhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChHH
Q 038416 9 TRHSPWPRRPLG-VSLLSDSTVAEDAVVD-ALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~ 84 (387)
.+++++.|.+.. ....++++.+.+++.+ .+......+|++..+..++|+.+++++...++..+++++|++ |+|+++
T Consensus 30 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~ 109 (412)
T 1yaa_A 30 TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTG 109 (412)
T ss_dssp SCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHh
Confidence 456788887521 2223678999999999 886544557877789999999999999765554456889999 999999
Q ss_pred HHHHHH--HhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC---ceEEEEeCCCC
Q 038416 85 AIEISL--SVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN---TVAIVIINPGN 159 (387)
Q Consensus 85 a~~~~~--~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~n 159 (387)
++..++ ..++++||+|+++.|+|+++...++ ..|.+++.+++...+++.+|+++++++++++ +.++++++|+|
T Consensus 110 a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~n 187 (412)
T 1yaa_A 110 ALHISAKFFSKFFPDKLVYLSKPTWANHMAIFE--NQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHN 187 (412)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHH--TTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHH--HcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 999984 3345699999999999999999999 9999999998732335789999999988653 44555699999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC--CCCccccccC-CCc---cEEEEecCcccccccccceEEEE
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS--TPYVPMGVFG-SIV---PVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~--~~~~~~~~~~-~~~---~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
|||.++|.+++++|+++|+++|+++|+|++|+++.+++ ....++..+. ... ++++++|+||.|+++|+|+||++
T Consensus 188 PtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 188 PTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEE
Confidence 99999999999999999999999999999999887754 1122232221 123 68999999999998899999998
Q ss_pred --e-----eCCCCcccchh----HHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHH
Q 038416 234 --T-----SDPNGILQNSG----FVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYE 296 (387)
Q Consensus 234 --~-----~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~ 296 (387)
+ ++ + +++++.... ....+++.+.+.++..+++... +.++++..++++++++.+.+
T Consensus 268 ~~~~~~~~~~--------~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (412)
T 1yaa_A 268 LALTKQAQNK--------TIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRD 339 (412)
T ss_dssp EECCSCTTHH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCH--------HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 32 4 666666533 3345668889999988888642 35788889999999999999
Q ss_pred HhhcCC---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHH
Q 038416 297 RIKEIP---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDG 372 (387)
Q Consensus 297 ~l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~ 372 (387)
.|++++ ++.+ ..|.+|+++|+.++ ... +..+++++||.+.+ ++||+++. ++++++++
T Consensus 340 ~L~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~-~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~ 400 (412)
T 1yaa_A 340 HLVKLGTPGNWDH-IVNQCGMFSFTGLT---------PQM-VKRLEETHAVYLVA--------SGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHTCSSCCTH-HHHCCSSEEECCCC---------HHH-HHHHHHHHCEECCT--------TSEEEGGGCCTTTHHHH
T ss_pred HHHhhCCCCCeee-eccCceEEEeeCCC---------HHH-HHHHHHhCCEEecc--------CcEEEEccCCHhHHHHH
Confidence 999874 3773 36778888886553 233 46677788999877 47999975 89999999
Q ss_pred HHHHHHHHHH
Q 038416 373 LERIKAFCQR 382 (387)
Q Consensus 373 ~~~l~~~~~~ 382 (387)
+++|+++++.
T Consensus 401 ~~~l~~~~~~ 410 (412)
T 1yaa_A 401 AKAIDEVVRF 410 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 68
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=3.3e-40 Score=312.55 Aligned_cols=355 Identities=21% Similarity=0.269 Sum_probs=272.8
Q ss_pred ccc-CCCCCCCCCCCCCCCc--HHHHHHHHHHhcC-------CC----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 038416 9 TRH-SPWPRRPLGVSLLSDS--TVAEDAVVDALRT-------AH----YNCYSPTLGVPSARRGIADYLNRDLPYKLSPE 74 (387)
Q Consensus 9 ~~~-~~~~~~~~~~~~~~~~--~~v~~a~~~~~~~-------~~----~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~ 74 (387)
.++ ++..|.| +.+++ +.+.+++.+.+.+ .. ...|++..+..++|+.+++|+.+.++.+++++
T Consensus 32 ~~i~~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~ 107 (444)
T 3if2_A 32 QPVNMLGGGNP----AKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE 107 (444)
T ss_dssp SCCEECSCCCC----CCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred hhhhccCCCCC----CcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH
Confidence 455 7777777 33222 5566777766655 21 24688888999999999999998888888999
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCC--------------eEEEc-CCCCcchHHH------hhccCCCceeeeeccCCCC-
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGA--------------NILIP-RPGYPLYEIH------AAGSNNNLEARHYDLLPEK- 132 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~--------------~vl~~-~p~~~~~~~~------~~~~~~g~~~~~~~~~~~~- 132 (387)
+|++|+|+++++..++.+++++|| +|+++ .|+|..+... +. ..|..+..++++.++
T Consensus 108 ~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g 185 (444)
T 3if2_A 108 NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFA--AVLPHIDEVTHDGEEG 185 (444)
T ss_dssp GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEE--ECCCEEEEEEETTEEE
T ss_pred HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhh--ccCceEEecccccccC
Confidence 999999999999999999998887 78875 9999988763 33 567777777765322
Q ss_pred --CccCChhhHHHh---hccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 133 --RWEVDLDGVEAL---ADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 133 --~~~~~~~~l~~~---~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
++.+|+++|+++ +++++++|++++|+||||.++|.+++++|+++|+++|+++|+|++|+.+.. +....... ..
T Consensus 186 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~ 263 (444)
T 3if2_A 186 FFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFP-NIIYSDAH-LN 263 (444)
T ss_dssp EEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CC
T ss_pred ccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccc-cccccccc-cc
Confidence 357899999998 677899999999999999999999999999999999999999999985321 11111111 12
Q ss_pred CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc-HHHHHH-HH
Q 038416 208 SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN-EAFFAK-II 284 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~ 284 (387)
..++++++.|+||. +++|+|+||+++++ ++++.+..... ...+++++.+.++..+++... .....+ ..
T Consensus 264 ~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 334 (444)
T 3if2_A 264 WDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIK 334 (444)
T ss_dssp CCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHH
T ss_pred CCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHH
Confidence 24578999999997 89999999999865 78888876643 456778889999888887643 222333 56
Q ss_pred HHHHHHHHHHHHHhhc-CCC--CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCC------
Q 038416 285 GLLKETADICYERIKE-IPC--ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMK------ 355 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~------ 355 (387)
+.++++++.+.+.|++ +++ +. +..|.+|+++|+.++... .+..++...+ .++||.+.||..|...
T Consensus 335 ~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~ 408 (444)
T 3if2_A 335 PFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----ISTLDLYERL-KAKGTLIVPSEYFFPGVDVSDY 408 (444)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SCHHHHHHHH-HHTTEECEEGGGSCTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CCHHHHHHHH-HHCCeEEecchhhcCCCCCccc
Confidence 6777788888887766 554 44 336788999999886421 1456676665 6779999999887532
Q ss_pred ----CeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 356 ----NWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 356 ----~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+++||+++.+++++++++++|+++++++.++
T Consensus 409 ~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 409 QHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp SGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHcc
Confidence 6899999889999999999999999887653
No 69
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=5.4e-40 Score=316.40 Aligned_cols=351 Identities=16% Similarity=0.223 Sum_probs=264.6
Q ss_pred cCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHH-hhcCCCCC---CCCCEEEcCChHHHH
Q 038416 11 HSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYL-NRDLPYKL---SPEDVYLTLGCSQAI 86 (387)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~-~~~~~~~~---~~~~i~~~~g~~~a~ 86 (387)
++.+.|.+ ++ +++.+.+++.+.+.. .+|++..|..++|+.+++++ .++++.+. ++++|++|+|+++++
T Consensus 107 i~l~~g~~----~~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal 178 (546)
T 2zy4_A 107 LSYVRDQL----GL-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAM 178 (546)
T ss_dssp HHHHHHTS----CC-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHH
T ss_pred hecccCCC----CC-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHH
Confidence 44444444 45 345666777776642 47998888899999877755 44443322 468999999999999
Q ss_pred HHHHHh-----hcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 87 EISLSV-----LARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 87 ~~~~~~-----l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
..++.+ ++++||+|+++.|+|++|...+.....|.+++.++++++++|.+|+++|++++++++++|++++|+|||
T Consensus 179 ~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPt 258 (546)
T 2zy4_A 179 AYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPP 258 (546)
T ss_dssp HHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSS
T ss_pred HHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCC
Confidence 999988 578999999999999999887551135688888888777778899999999888889999999999999
Q ss_pred cccCCHHHHHHHHHHH--HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 162 GNVFSYQHLQKIARTA--RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~--~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
|.+++.+++++|+++| +++|++||+||+|+++.++ ..++.... .++++++.||||.++++|+|+||+++++.
T Consensus 259 G~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-- 332 (546)
T 2zy4_A 259 SVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQ-- 332 (546)
T ss_dssp CBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESS--
T ss_pred CccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCH--
Confidence 9999999999999999 7899999999999988753 22333332 35789999999999999999999999762
Q ss_pred cccchhHHHHHHhh-------------h------------------------hccCCcchHHHHHH-----HHHhhhccH
Q 038416 240 ILQNSGFVDSIKGC-------------L------------------------NAASHPVTFIQAAV-----PRIVDETNE 277 (387)
Q Consensus 240 ~~~~~~~~~~~~~~-------------~------------------------~~~~~~~~~~~~~~-----~~~l~~~~~ 277 (387)
++++.+.+. . ..+.+.+.+.|.++ ..++.+ .+
T Consensus 333 -----~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~~ 406 (546)
T 2zy4_A 333 -----NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-AD 406 (546)
T ss_dssp -----CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-TC
T ss_pred -----HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-cH
Confidence 155544210 0 12235666777764 233432 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccc--ccC---------CCcHHHHHHHHHHhcCeEE
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSM--LED---------IGDDLEFCLKLAKEESVII 346 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~---------~~~~~~~~~~ll~~~gi~v 346 (387)
.+..+..+.++++++.+.+.|. + ++. ...+.+++|+|++++... .++ ..++.+++.+++.++||.+
T Consensus 407 ~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v 483 (546)
T 2zy4_A 407 EYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVL 483 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEE
Confidence 6778888889999998888885 4 344 336788999999875200 000 0023455667778889999
Q ss_pred EcCCccCC-CCeEEEEeeC-ChHhHHHHHHHHHHHHHHhh
Q 038416 347 LPGRTVGM-KNWLRIAFAA-EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 347 ~~g~~~~~-~~~~Ri~~~~-~~e~~~~~~~~l~~~~~~~~ 384 (387)
.||..|+. .+++||+++. +++++++++++|+++++++.
T Consensus 484 ~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 484 LPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp EESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred eCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999876 4689999976 78999999999999987765
No 70
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.7e-39 Score=300.18 Aligned_cols=330 Identities=18% Similarity=0.224 Sum_probs=266.2
Q ss_pred cCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 11 HSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
++++.|.+ +++.++.+.+++.+.+... ....|+...+ .++|+.+++++.+.++.++++++|++|+|+++++..
T Consensus 33 idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~ 107 (369)
T 3cq5_A 33 IRLNTNEN----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQ 107 (369)
T ss_dssp EECSSCCC----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred eeccCCCC----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHH
Confidence 44555444 5788999999999988642 2356776545 799999999998877777788999999999999999
Q ss_pred HHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCH
Q 038416 89 SLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~ 167 (387)
++.+++++||+|+++.|+|+++...++ ..|.+++.++.+ +++.+|++++++++++ ++++|++++|+||||.++|.
T Consensus 108 ~~~~l~~~gd~Vl~~~~~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~ 183 (369)
T 3cq5_A 108 LLQAFGGPGRTALGFQPSYSMHPILAK--GTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSL 183 (369)
T ss_dssp HHHHHCSTTCEEEEEESSCTHHHHHHH--HTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHH--HcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 999999999999999999999999999 899999998864 4567899999999987 88999999999999999997
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCc-cEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIV-PVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++.++++ .+++++|+|++|+.+.+. ...+...+..+ +++++.|+||.++++|+|+||+++++ ++
T Consensus 184 ~~l~~l~~---~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 249 (369)
T 3cq5_A 184 DDVERIIN---VAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AF 249 (369)
T ss_dssp HHHHHHHH---HCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HH
T ss_pred HHHHHHHH---hCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HH
Confidence 76666666 455999999999987643 11122223334 78999999999988999999999976 67
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+..... .++++++.+.++..+++. .+++++..++++++++.+.+.|++. ++... +..++|+|++++.
T Consensus 250 ~~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~---- 319 (369)
T 3cq5_A 250 IDAVMLVRL-PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYAVV--PSESNFVFFGDFS---- 319 (369)
T ss_dssp HHHHHTTSC-TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE--CCSSSEEEEECCS----
T ss_pred HHHHHHcCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC--CCCCeEEEEECCC----
Confidence 777776543 356888899988888875 4567888899999999999999885 67733 4556788887752
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+..++...+ .++||.+.|| +.++++||+++ ++++++++++.|+++++
T Consensus 320 ---~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 ---DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ---SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 456676666 5779999998 23689999998 78999999999988764
No 71
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=8e-41 Score=312.05 Aligned_cols=346 Identities=18% Similarity=0.179 Sum_probs=266.8
Q ss_pred cccCCCCCCCCCCCC--CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChHH
Q 038416 9 TRHSPWPRRPLGVSL--LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~ 84 (387)
.+++++.|.+ .+++ .++++.+.+++.+.+......+|++..+..++|+++++++....+..+++++|++ |+|+++
T Consensus 27 ~~i~l~~g~~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~ 105 (396)
T 2q7w_A 27 GKINLGIGVY-KDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG 105 (396)
T ss_dssp -CEESSCCSC-CCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred Cceecccccc-cCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence 4678888874 2223 4678999999999876434557877789999999999999654332245789998 999999
Q ss_pred HHHHHHHhhc--CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCC
Q 038416 85 AIEISLSVLA--RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGN 159 (387)
Q Consensus 85 a~~~~~~~l~--~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~n 159 (387)
++..+++++. .+||+|+++.|+|+++...++ ..|.+++.+++.+++++.+|++++++++++ +++++++++|+|
T Consensus 106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n 183 (396)
T 2q7w_A 106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFN--SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN 183 (396)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHH--HTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH--HcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 9999998763 699999999999999999999 899999999885445678999999998864 367788899999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC-CCCccccccCC-CccEEEEecCcccccccccceEEEEe--e
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS-TPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVT--S 235 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~--~ 235 (387)
|||.++|.+++++|+++|+++|+++|+||+|+++.+++ ....++..+.. .++++++.|+||.++++|+|+||+++ +
T Consensus 184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~ 263 (396)
T 2q7w_A 184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA 263 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence 99999999999999999999999999999999987653 11223332322 25789999999999999999999997 2
Q ss_pred CCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCCC
Q 038416 236 DPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP---CITC 306 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~ 306 (387)
++... .++++.+.... ....+++++.+.++..+++... +.++++..++++++++.+.+.|++++ ++.
T Consensus 264 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 339 (396)
T 2q7w_A 264 DSETV---DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFS- 339 (396)
T ss_dssp SHHHH---HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCT-
T ss_pred CHHHH---HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-
Confidence 21000 02444444332 2334558888998888887531 35677888899999999999999874 366
Q ss_pred CCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC-ChHhHHHHHHHHHHH
Q 038416 307 PVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA-EPATLEDGLERIKAF 379 (387)
Q Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~-~~e~~~~~~~~l~~~ 379 (387)
+..|.+|+++|+.++ . +.+..+++++||.+.|| +||+++. +++++++++++|+++
T Consensus 340 ~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 340 FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence 336788889887653 2 35566677889999885 5999975 899999999999875
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1e-39 Score=308.90 Aligned_cols=358 Identities=15% Similarity=0.121 Sum_probs=268.6
Q ss_pred cccccccCCCCCCCCCC-CCCCCcHHHHHHHHHHh--cCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--c
Q 038416 5 KGQETRHSPWPRRPLGV-SLLSDSTVAEDAVVDAL--RTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--T 79 (387)
Q Consensus 5 ~g~~~~~~~~~~~~~~~-~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~ 79 (387)
.+.+.+++++.|.+... ...+..+.+.+++.+.. .......|.+..|..++|+.+++++......++++++|++ |
T Consensus 46 ~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t 125 (448)
T 3meb_A 46 DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQS 125 (448)
T ss_dssp CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCccccCcCcEEEEEC
Confidence 45556788889877332 23446778888877665 2223457888889999999999998311100112689999 9
Q ss_pred CChHHHHHH--HHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeeccCCCC-CccCChhhHHHhhcc---CceE
Q 038416 80 LGCSQAIEI--SLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYDLLPEK-RWEVDLDGVEALADE---NTVA 151 (387)
Q Consensus 80 ~g~~~a~~~--~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~ 151 (387)
+|+++++.. .+..++.+||+|+++.|+|.++...++ ....|.+++.+++...+ ++.+|++++++++++ ++++
T Consensus 126 ~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~ 205 (448)
T 3meb_A 126 LSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIF 205 (448)
T ss_dssp SHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEE
Confidence 999999988 445667899999999999998865543 01468899999885444 678999999999874 5778
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC--CCcccccc-CCCccEEEEecCcccccccccc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST--PYVPMGVF-GSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r 228 (387)
+++++|+||||..++.+++++|+++|+++|+++|+|++|+++.+++. ...++..+ ....+++++.|+||.|+++|+|
T Consensus 206 v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 285 (448)
T 3meb_A 206 LFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGER 285 (448)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGC
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcccc
Confidence 88999999999999999999999999999999999999999887641 11222222 2345789999999999999999
Q ss_pred eEEE--Ee--------eCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHH
Q 038416 229 LGWL--VT--------SDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETAD 292 (387)
Q Consensus 229 ~G~i--~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~ 292 (387)
+||+ ++ +++... +++++.+.... ....+++.+++.++..++.... ...+++..++++++++
T Consensus 286 iG~l~~v~~~~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~ 362 (448)
T 3meb_A 286 IGCLHVVHAGVEGSVEKNKALS---AAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRS 362 (448)
T ss_dssp CEEEEEECCCCSSSHHHHHHHH---HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccccccCCHHHH---HHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 66 321000 03555555433 3445677889999888887632 1447788899999999
Q ss_pred HHHHHhhcC--CC------CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeC
Q 038416 293 ICYERIKEI--PC------ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAA 364 (387)
Q Consensus 293 ~~~~~l~~~--~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~ 364 (387)
.+.+.|+++ ++ +.. ..|.+++|+|+.++ .+++..+++++||.+.||.. |||++.
T Consensus 363 ~l~~~L~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~----------~~~~~~ll~~~gV~v~~G~g-------Ris~a~ 424 (448)
T 3meb_A 363 LLHASLAKRKTPGPGSKGTWDH-ILTAIGMFTFTGLT----------PEHVDYLKEKWSIYLVKAGG-------RMSMCG 424 (448)
T ss_dssp HHHHHHHHTTCCCSTTTCCCTH-HHHCCSSEEECCCC----------HHHHHHHHHHHCEEECSGGG-------EEEGGG
T ss_pred HHHHHHHhhCCCCcCcccccce-eCCCceEEEecCCC----------HHHHHHHHHhCCEEEeCCCc-------EEEEec
Confidence 999999886 55 553 36788999997663 35677777888999999752 999965
Q ss_pred -ChHhHHHHHHHHHHHHHHh
Q 038416 365 -EPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 365 -~~e~~~~~~~~l~~~~~~~ 383 (387)
+++++++++++|+++++++
T Consensus 425 ~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 425 LTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp CCTTTHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 8888999999999998854
No 73
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.1e-39 Score=299.32 Aligned_cols=324 Identities=16% Similarity=0.196 Sum_probs=257.2
Q ss_pred ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 8 ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+.+++++.+.+ .+++++.+.+++.+.+.. ...|+...+ .++|+.+++++ ++++++|++|+|+++++.
T Consensus 15 ~~~id~~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al~ 81 (350)
T 3fkd_A 15 SEIVNFSTTVW----TDGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAFY 81 (350)
T ss_dssp -CCEECSCCSC----CCSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHHH
T ss_pred ccEEEccCCCC----CCCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHHH
Confidence 45667767655 688999999999998843 457877655 89999999998 467889999999999999
Q ss_pred HHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeecc-CCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 88 ISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDL-LPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
.++.++. ||+|+++.|+|.++...++ ..|.+++.+++ +..++ +++ +++++|++++|+||||.++|
T Consensus 82 ~~~~~l~--gd~Vi~~~p~~~~~~~~~~--~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~ 147 (350)
T 3fkd_A 82 QIAQAFR--GSRSLIAIPSFAEYEDACR--MYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ 147 (350)
T ss_dssp HHHHHTT--TCEEEEEESCCHHHHHHHH--HTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHC--CCEEEEeCCCcHHHHHHHH--HcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence 9999998 9999999999999999999 99999999987 43333 333 57899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|++.|+++ ++|+|++|+.+.+.+.... ..++..++++++.|+||.++++|+|+||+++++ ++
T Consensus 148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~~ 215 (350)
T 3fkd_A 148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRP--ADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------DF 215 (350)
T ss_dssp HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCG--GGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHhCCCC--EEEEECchhhhccCcchhh--HHhhcCCCEEEEecCchhccCcchheEeEEeCH--------HH
Confidence 99999999988765 9999999998876654322 334455678999999999999999999999964 78
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+..... .++++++.+.++..+++... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|+.++..
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~--- 287 (350)
T 3fkd_A 216 MKRVAAFST-PWAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG--- 287 (350)
T ss_dssp HHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence 888877654 45788889999988887532 2333333333 78888889998888888 4 455677888887642
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
+..++...+++++||.+.||..|+. ++++||+++ ++++++++++.|++++++
T Consensus 288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 4567777776658999999998865 689999997 566777777777766654
No 74
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.9e-40 Score=310.80 Aligned_cols=342 Identities=18% Similarity=0.159 Sum_probs=262.2
Q ss_pred cccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE--EcCChHH
Q 038416 7 QETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVY--LTLGCSQ 84 (387)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~--~~~g~~~ 84 (387)
.+.+++++.|++ .+++.++.+.++++++.. ....+|.+..|..+||+++++++....+.++++++|. .+.++++
T Consensus 40 ~~~~i~l~~g~~---~d~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~g 115 (409)
T 4eu1_A 40 AKRKVNLSIGVY---RDDADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTG 115 (409)
T ss_dssp CSSCEECCCSSC---CCTTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHH
T ss_pred CcCceeeeeeEE---ECCCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchH
Confidence 345678888764 255566667777777733 3345888888999999999999853222112267884 4888888
Q ss_pred HHHHH---HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCC
Q 038416 85 AIEIS---LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPG 158 (387)
Q Consensus 85 a~~~~---~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~ 158 (387)
++..+ +.++.++||+|+++.|+|.++...++ ..|.+++.+++..++++.+|+++++++++ +.++++++++|+
T Consensus 116 a~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~ 193 (409)
T 4eu1_A 116 ALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFA--KAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAH 193 (409)
T ss_dssp HHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHH--HTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH--HcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCC
Confidence 88875 44556899999999999999999999 99999999998655678899999999885 345666779999
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCC--Ccccccc-CCCccEEEEecCcccccccccceEEE--E
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTP--YVPMGVF-GSIVPVITLGSISKRWIVPGWRLGWL--V 233 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~--~~~~~~~-~~~~~~~~i~s~sK~~~~~g~r~G~i--~ 233 (387)
||||.+++.+++++|+++|+++|+++|+||+|+++.+++.. ..++..+ +..+++++++|+||.|+++|+|+||+ +
T Consensus 194 NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v 273 (409)
T 4eu1_A 194 NPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHIS 273 (409)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEE
Confidence 99999999999999999999999999999999998876521 1222222 33457899999999999999999997 5
Q ss_pred eeCCCCcccchh----HHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 234 TSDPNGILQNSG----FVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 234 ~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
+.+ ++ +++.++... ....+++.+.+.++..+++... ...+++..++++++++.+.+.|++++.
T Consensus 274 ~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 346 (409)
T 4eu1_A 274 TAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGS 346 (409)
T ss_dssp CSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 543 24 555555543 2455677889999888887532 344778889999999999999998721
Q ss_pred ---CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHH
Q 038416 304 ---ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAF 379 (387)
Q Consensus 304 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~ 379 (387)
+. +..|.+++++|+.++ .+++..+++++||.+.|| .||+++ .+++++++++++|+++
T Consensus 347 ~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~--------~Ri~~~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 347 VHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLN--------GRAAVSGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp CSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCC--------CEEEEEecCHhhHHHHHHHHHHH
Confidence 55 336788999986553 245677778889999986 389995 5778899999999877
Q ss_pred H
Q 038416 380 C 380 (387)
Q Consensus 380 ~ 380 (387)
+
T Consensus 408 l 408 (409)
T 4eu1_A 408 T 408 (409)
T ss_dssp H
T ss_pred h
Confidence 5
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=9.4e-39 Score=294.24 Aligned_cols=327 Identities=16% Similarity=0.240 Sum_probs=260.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++++.+.+ ++++++.+.+++.+.+... ....|+.. +..++|+.+++++ ++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~~al 95 (360)
T 3hdo_A 27 SWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSDEVL 95 (360)
T ss_dssp TSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred ceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 4566777665 7899999999999998763 13467653 5699999999999 46788999999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..++.+++++||+|+++.|+|.++...++ ..|.+++.++++. ++.+ +++++.+ +++++++++|+||||.++|
T Consensus 96 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~ 167 (360)
T 3hdo_A 96 NNLIRAFAAEGEEIGYVHPSYSYYGTLAE--VQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSFP 167 (360)
T ss_dssp HHHHHHHCCTTCEEEEESSSCTHHHHHHH--HHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHhCCCCEEEEcCCChHHHHHHHH--HCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcC
Confidence 99999999999999999999999999999 9999999998843 3333 5544433 4679999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.++ +.++|+++|+++|+|++|+.+. +.....+ ....++++++.|+||.++++|+|+||+++++ ++
T Consensus 168 ~~~---l~~l~~~~~~~li~De~~~~~~--~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~ 232 (360)
T 3hdo_A 168 LEY---IDELARRCAGMLVLDETYAEFA--ESNALEL--VRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------EV 232 (360)
T ss_dssp HHH---HHHHHHHBSSEEEEECTTGGGS--SCCCTHH--HHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------HH
T ss_pred HHH---HHHHHHHCCCEEEEECChHhhC--CcchhHH--hccCCCEEEEecchHhhcCCccceeeEeeCH--------HH
Confidence 655 5556678999999999999863 3322222 2334678999999999999999999999865 78
Q ss_pred HHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 247 VDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
++.+..... .++++++.+.++..+++. ..++++..++++++++.+.+.|+++ ++. + .+..+.|+|+.++.
T Consensus 233 ~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~---- 302 (360)
T 3hdo_A 233 IAALDKIRD-HYNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPD---- 302 (360)
T ss_dssp HHHHHHHSC-SCCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTT----
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCC----
Confidence 888877654 467889999999998885 5678899999999999999999988 777 4 35566788877653
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+ .++||.+.++.....++++||+++ ++++++++++.|++..+.+
T Consensus 303 --~~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 303 --RDGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp --CCHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC--
T ss_pred --CCHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhccc
Confidence 1455666665 567999999876556789999998 7889999999888776543
No 76
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.2e-38 Score=288.00 Aligned_cols=308 Identities=16% Similarity=0.217 Sum_probs=246.8
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.+++++.+.+++.+.... ...|+. .+..++|+.+++++ ++++++|++|+|+++++..++.++ +||+|++
T Consensus 27 ~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~ 95 (337)
T 3p1t_A 27 PEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDECFDRISAEF--SSMRFVT 95 (337)
T ss_dssp CSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHS--TTSEEEE
T ss_pred CCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEE
Confidence 478999999999998865 456764 68899999999999 467889999999999999999998 8999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
+.|+|.++...++ ..|.+++.++++ .++.+|+++++++ .+++++++++|+||||.++|.+++.++ |+++++
T Consensus 96 ~~p~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l---~~~~~~ 166 (337)
T 3p1t_A 96 AWPGFDGYRARIA--VSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQL---RQRAGK 166 (337)
T ss_dssp ESSSCSHHHHHHT--TSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHH---HHHCSE
T ss_pred eCCCcHHHHHHHH--HcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHH---HHhCCc
Confidence 9999999999999 999999999874 3568899999886 468999999999999999997665555 557776
Q ss_pred EEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcch
Q 038416 183 IVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVT 262 (387)
Q Consensus 183 ~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (387)
+|+||+|+.+...+. .. ....+++++++|+||.|+++|+|+||+++++ ++++.+..... ..+++.
T Consensus 167 -~ivDea~~~~~~~~~--~~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~l~~~~~-~~~~~~ 231 (337)
T 3p1t_A 167 -LLIDETYVDYSSFRA--RG---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELIAAMKRKQW-FCNVGT 231 (337)
T ss_dssp -EEEECTTGGGSSCSS--SC---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHHHHHHTTSC-TTCSCH
T ss_pred -EEEECCChhhccccc--cc---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHHHHHHhhcC-CCCCCH
Confidence 666999998664332 11 1233568999999999999999999999875 78887776543 467788
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhc
Q 038416 263 FIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEE 342 (387)
Q Consensus 263 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (387)
+.+.++..+++. ...+.+..+++.++++.+.+.|+++ ++. +..+. +.|+|+..+ +..++. +++.++
T Consensus 232 ~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-~~~~~~~~~--------~~~~~~-~~l~~~ 297 (337)
T 3p1t_A 232 LDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSE-ANFVLVENA--------AGERTL-RFLRER 297 (337)
T ss_dssp HHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCS-SSEEEEECT--------TTHHHH-HHHHHT
T ss_pred HHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCC-CeEEEEEcC--------CHHHHH-HHHHHC
Confidence 889888888875 3346667777788889999999988 777 42444 456666654 233444 445778
Q ss_pred CeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 343 SVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 343 gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
||.+.||..|+.++++||+++ ++++++++++.|+++.
T Consensus 298 gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 298 GIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp TEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred CeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 999999999988899999998 5788888888887764
No 77
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=2e-40 Score=308.38 Aligned_cols=327 Identities=16% Similarity=0.154 Sum_probs=251.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhc--C-CCCCCCCCCCCc-----HHHHHHHHHHHhhcCCCCCCC-CCEEEc
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALR--T-AHYNCYSPTLGV-----PSARRGIADYLNRDLPYKLSP-EDVYLT 79 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~--~-~~~~~y~~~~~~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~~ 79 (387)
..++++.|.| +++.++.+.+++.+... . ....+|++..|. .+||+++++|++ .++..+.+ ++|++|
T Consensus 23 ~~i~l~~g~p----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t 97 (391)
T 3bwn_A 23 FVVNLDHGDP----TAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVG 97 (391)
T ss_dssp SCEECSSCCC----GGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEE
T ss_pred CeeEcCCCCC----CCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEe
Confidence 4567788877 67777777776644332 1 134579888888 999999999998 45666666 589999
Q ss_pred CChHHHHHHHHHhhcCCCC----eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEe
Q 038416 80 LGCSQAIEISLSVLARPGA----NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVII 155 (387)
Q Consensus 80 ~g~~~a~~~~~~~l~~~g~----~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 155 (387)
+|+++++..++.+++++|| +|+++.|+|.++...++ ..|.+++.++++.+ + +. .+++++|+++
T Consensus 98 ~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~--~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~ 164 (391)
T 3bwn_A 98 TGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETT--YVRSGMYKWEGDAW-G--FD--------KKGPYIELVT 164 (391)
T ss_dssp EHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHH--TTCBTTEEEEEEST-T--CC--------CCSCEEEEEE
T ss_pred CChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHH--HcCCeEEEecCCHH-H--cC--------CCCCEEEEEC
Confidence 9999999999999999999 99999999999999999 99999988887532 2 22 2578999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe-
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT- 234 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~- 234 (387)
+||||||.+++ +|++.++.+++++|+|++|.. + ...++.. ..+++++++||||.|+++|+|+||+++
T Consensus 165 ~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 232 (391)
T 3bwn_A 165 SPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALVK 232 (391)
T ss_dssp SSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEEC
T ss_pred CCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEec
Confidence 99999999986 344422223399999999973 1 2223332 345789999999999999999999997
Q ss_pred eCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc---------HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 235 SDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN---------EAFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
++ ++++.+..... ...+++.+.|.++..+|+... +.++++..+.++++++.+.+.|+++|++
T Consensus 233 ~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 233 DK--------EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp CH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred CH--------HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44 68888877654 346788899999999988642 4578889999999999999999988766
Q ss_pred CCCCCC-------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-CCeEEEEeeCChHhHH
Q 038416 305 TCPVKP-------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-KNWLRIAFAAEPATLE 370 (387)
Q Consensus 305 ~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~Ri~~~~~~e~~~ 370 (387)
.+. .| .+|+|+|++++. . +.+..+++++||.+.||..|+. .+++|||++.++++++
T Consensus 305 ~~~-~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~ 374 (391)
T 3bwn_A 305 TLP-KYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN 374 (391)
T ss_dssp ECC-CCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred ccc-cCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence 632 33 345588988863 1 2445566788999999999976 6899999988899999
Q ss_pred HHHHHHHHHHHHh
Q 038416 371 DGLERIKAFCQRH 383 (387)
Q Consensus 371 ~~~~~l~~~~~~~ 383 (387)
+++++|++++++.
T Consensus 375 ~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 375 VFLERLANMKLIK 387 (391)
T ss_dssp HHHHHHHSCC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999998877653
No 78
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.1e-39 Score=304.19 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=263.2
Q ss_pred cccCCCCCCCCC-CCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE--cCChHHH
Q 038416 9 TRHSPWPRRPLG-VSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL--TLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~a 85 (387)
.+++++.|.+.. ...+++++.+.+++.+.+.......|++..+..++|+++++++... +.++++|++ |+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~---~~~~~~v~~~~~~g~~~a 103 (394)
T 2ay1_A 27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD---GLKSETTATLATVGGTGA 103 (394)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG---GCCGGGEEEEEEEHHHHH
T ss_pred cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC---CCCcccEEEEecCCchhH
Confidence 467788887522 2234778999999999876434557888788999999999998431 226789999 9999999
Q ss_pred HHHHHHhhcC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC---ceEEEEeCCCCC
Q 038416 86 IEISLSVLAR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN---TVAIVIINPGNP 160 (387)
Q Consensus 86 ~~~~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~np 160 (387)
+..++.++.. +||+|+++.|+|+++...++ ..|.+++.+++.+++++.+|++++++++++. ++++++++|+||
T Consensus 104 ~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~np 181 (394)
T 2ay1_A 104 LRQALELARMANPDLRVFVSDPTWPNHVSIMN--FMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNP 181 (394)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCHHHHHHHH--HHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTT
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH--HcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999988754 89999999999999999999 8999999998865456789999999988653 567778999999
Q ss_pred ccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCC-CCccccccCC-CccEEEEecCcccccccccceEEEEe--eC
Q 038416 161 CGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGST-PYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVT--SD 236 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~--~~ 236 (387)
||.++|.+++++|+++|+++|+++|+||+|+++.+++. ...++..+.. .+++++++|+||.++++|+|+||+++ ++
T Consensus 182 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 261 (394)
T 2ay1_A 182 TGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCAD 261 (394)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCC
Confidence 99999999999999999999999999999998876431 1112222221 24689999999999999999999997 32
Q ss_pred CCCcccchhHH----HHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---C
Q 038416 237 PNGILQNSGFV----DSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP---C 303 (387)
Q Consensus 237 ~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~---~ 303 (387)
++++ +.+.... ....+++++.+.++..+++... +.++++..++++++++.+.+.|++++ +
T Consensus 262 -------~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 334 (394)
T 2ay1_A 262 -------AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDR 334 (394)
T ss_dssp -------HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST
T ss_pred -------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1333 3333222 2234458889988888887531 35678888999999999999998863 3
Q ss_pred CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHH
Q 038416 304 ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAF 379 (387)
Q Consensus 304 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~ 379 (387)
+. +..|.+|+|+|+.++ . +.+..+++++||.+.|| +||+++ .+++++++++++|+++
T Consensus 335 ~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 335 FG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp TT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred ee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence 66 335677999997664 2 34566677889999885 599996 4899999999999765
No 79
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=4.4e-40 Score=309.03 Aligned_cols=329 Identities=13% Similarity=0.138 Sum_probs=262.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC--CCCCCCC-C---cHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY--NCYSPTL-G---VPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~-~---~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
..++.+.|.| +++.++.+.+++.+.+..... ..|++.. | ..+||+++++|++...+..+++++|++|+|+
T Consensus 57 ~~i~l~~g~~----~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~ 132 (427)
T 2hox_A 57 CSADVASGDG----LFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGV 132 (427)
T ss_dssp CCEECCSCCC----GGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHH
T ss_pred ceEEecCcCC----CCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCH
Confidence 4566777766 677888999999888742222 3488877 8 8999999999998876666788999999999
Q ss_pred HHHHHHHHHhh--------cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEE
Q 038416 83 SQAIEISLSVL--------ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVI 154 (387)
Q Consensus 83 ~~a~~~~~~~l--------~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 154 (387)
++++..++.++ +++||+|+++.|+|..+...++ ..|.+++.+ .+|++.|+++++++++++++
T Consensus 133 ~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~--~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l 202 (427)
T 2hox_A 133 TQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK--YFDKKGYVW--------AGNAANYVNVSNPEQYIEMV 202 (427)
T ss_dssp HHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHH--HSCBTTEEE--------EEEGGGGTTCSCGGGEEEEE
T ss_pred HHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHH--HcCCeeeee--------cCCHHHHHHhhcCCceEEEE
Confidence 99999999999 8999999999999999999999 888887643 45788888888888999999
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
++|+||||.+++ +.+ + ++..+.|+++.+ +..++..+. .+++++++||||.++++|+|+||+++
T Consensus 203 ~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~ 265 (427)
T 2hox_A 203 TSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI 265 (427)
T ss_dssp ESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred cCCCCCcccccH-HHH-------c--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence 999999999999 422 2 456777776642 122333333 46789999999999999999999999
Q ss_pred eCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhcc----------HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 235 SDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETN----------EAFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
++ +++++++.+... ...+++.+.|.++..+|+... +.++.+..+.++++++.+.+.|+++++
T Consensus 266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 52 268888887654 346788889999888887532 245667788999999999999998866
Q ss_pred CCC--C-----------CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-CCeEEEEeeCChHhH
Q 038416 304 ITC--P-----------VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-KNWLRIAFAAEPATL 369 (387)
Q Consensus 304 ~~~--~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~Ri~~~~~~e~~ 369 (387)
+.+ . ..|.+|+|+|++++. +..++...+++++||.+.||..|+. ++++|||++.+++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l 411 (427)
T 2hox_A 339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF 411 (427)
T ss_dssp EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred ccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHH
Confidence 653 1 135569999999864 2345677777788999999998876 789999998899999
Q ss_pred HHHHHHHHHHHHH
Q 038416 370 EDGLERIKAFCQR 382 (387)
Q Consensus 370 ~~~~~~l~~~~~~ 382 (387)
++++++|++++++
T Consensus 412 ~~~l~~l~~~~~~ 424 (427)
T 2hox_A 412 DQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988754
No 80
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=8.3e-38 Score=290.39 Aligned_cols=350 Identities=15% Similarity=0.100 Sum_probs=255.2
Q ss_pred ccCCCCCCCCCCC-CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCC--EEEcCChHHHH
Q 038416 10 RHSPWPRRPLGVS-LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPED--VYLTLGCSQAI 86 (387)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~a~ 86 (387)
++|+++|-..... ..+..+.|++|.+.+........|.+..|.+++|+++++++... ....+. .+-|.|+|.|+
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~ 122 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAV 122 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHH
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCC---CccccccceeeecCchHHH
Confidence 6788898432211 23567899999988887665556999999999999999988432 222233 34578888887
Q ss_pred HHHHHhh----cCCCCeEEEcCCCCcchHHHhhccCCCce-eeeeccCCCCCccCChhhHHHhh---ccCceEEEEeCCC
Q 038416 87 EISLSVL----ARPGANILIPRPGYPLYEIHAAGSNNNLE-ARHYDLLPEKRWEVDLDGVEALA---DENTVAIVIINPG 158 (387)
Q Consensus 87 ~~~~~~l----~~~g~~vl~~~p~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~l~~p~ 158 (387)
..++..+ .++||.|++++|+|.+|...++ ..|.+ +..++....+++.+|.+.+.+.+ .++++++++++||
T Consensus 123 ~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~--~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~ 200 (420)
T 4h51_A 123 SLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVK--AAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAH 200 (420)
T ss_dssp HHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHH--HTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSC
T ss_pred HHHHHHHHHhcCCCCCEEEEecCCchhHHHHHH--HcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCC
Confidence 7666554 4799999999999999999999 99987 44555544556678888877765 3567788888999
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc---cccCCCccEEEEecCcccccccccceEEEEee
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM---GVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
||||..++.+++++|+++|+++++++|+|++|.+|.+++...... ...+...+++++.||||.|+++|+|+||+++.
T Consensus 201 NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~ 280 (420)
T 4h51_A 201 NPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLL 280 (420)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEec
Confidence 999999999999999999999999999999999998765322221 11233456899999999999999999999987
Q ss_pred CCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCCC
Q 038416 236 DPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETN-----EAFFAKIIGLLKETADICYERIKEIP---CITC 306 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~ 306 (387)
.+.. .....+..++.... ...+.++..++.++..++.+.. +..++.+.+++.++|+.+.+.|+++. .|..
T Consensus 281 ~~~~-~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~ 359 (420)
T 4h51_A 281 LKDK-TKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEH 359 (420)
T ss_dssp CSCH-HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTH
T ss_pred ccCH-HHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 5210 00001112222222 2456777888888888887632 34567778889999999999998862 2442
Q ss_pred CCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHHHHHhhh
Q 038416 307 PVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ .++.|+|.|+.++ . +.++ +|+++||.+.||+ |||++ .++++++.+.++|.+++++..+
T Consensus 360 i-~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 360 V-INQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG--------RANMAGLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp H-HHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC--------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred e-cCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC--------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence 3 5677999886553 2 3344 4588899988864 99995 6999999999999999988654
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.3e-37 Score=283.84 Aligned_cols=314 Identities=19% Similarity=0.258 Sum_probs=249.3
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEIS 89 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 89 (387)
++++..+.+ +++.++.+.+++.+.+......+|+.. +..++|+.+++++++. .+++++|++|+|+++++..+
T Consensus 21 ~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~ 92 (335)
T 1uu1_A 21 KTYLALNEN----PFPFPEDLVDEVFRRLNSDALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVM 92 (335)
T ss_dssp SEEESSCCC----SSCCCHHHHHHHHHTCCGGGGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHH
T ss_pred ceECCCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHH
Confidence 445555443 577899999999998843334567653 6899999999999542 25678999999999999999
Q ss_pred HHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 90 LSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 90 ~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++++ ||+|+++ |+|+++...++ ..|.++..++++ +++.+|++++ +++++|++++|+||||.++|.++
T Consensus 93 ~~~~---gd~Vl~~-p~y~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 93 MLMF---DRSVFFP-PTYSCYRIFAK--AVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHS---SEEEECS-SSCHHHHHHHH--HHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHh---CCcEEEC-CCcHHHHHHHH--HcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 9998 8999999 99999999988 899999988874 3457788776 57899999999999999999998
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++++++| | ++|+|++|+++... .. +..++..+++++++|+||.++++|+|+||+++++ ++++.
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHHH
Confidence 88888877 7 89999999986532 11 2223334578999999999999999999999965 67777
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
+..... .++++++.+.++..+++. .+++++..++++++++.+.+.|+++ ++. + .|.+++|+|++++. .
T Consensus 224 l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~------~ 291 (335)
T 1uu1_A 224 YNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEK------E 291 (335)
T ss_dssp HHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCT------H
T ss_pred HHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCC------C
Confidence 776543 357888999999998876 3568888899999999999999887 666 4 45667889988763 1
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
+..++...+. ++||.+.|+ ++++||+++. ++++++++++|+++
T Consensus 292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 3456666665 569999983 5799999965 57799988888653
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=8.3e-36 Score=278.30 Aligned_cols=335 Identities=13% Similarity=0.080 Sum_probs=255.5
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+++++.|.+ +++++++.+.+++.+.+... ....|....|..++++.+++++.+.++ .+++++|+|+++++
T Consensus 44 ~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~a~ 116 (398)
T 3a2b_A 44 RVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQSN 116 (398)
T ss_dssp EEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHHHH
T ss_pred eEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHHHH
Confidence 3556666644 36668999999999988642 122345556777888888888877655 25899999999999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEEeCCCCCcc
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVIINPGNPCG 162 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG 162 (387)
..++.+++++||.|+++.|+|..+...++ ..|.+++.++. .|+++|++++++ ++++|++++|+||||
T Consensus 117 ~~~~~~~~~~gd~V~~~~p~~~~~~~~~~--~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG 187 (398)
T 3a2b_A 117 LGPLSCLMGRNDYILLDERDHASIIDGSR--LSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG 187 (398)
T ss_dssp HHHHHHSSCTTCEEEEETTCCHHHHHHHH--HSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred HHHHHHHhCCCCEEEECCccCHHHHHHHH--HcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 99999999999999999999999999999 89999988875 478999998876 688999999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCcc-EEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVP-VITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
..++ +++|.++|+++|+++|+|++|+.+.++.........++..++ +++++|+||+++++| ||+++++
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~----- 256 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA----- 256 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH-----
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH-----
Confidence 9988 889999999999999999999977653211111111222233 599999999998777 9999865
Q ss_pred cchhHHHHHHhh-h-hccCCcchHHHH-HHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEE
Q 038416 242 QNSGFVDSIKGC-L-NAASHPVTFIQA-AVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 242 ~~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~ 318 (387)
++++.+... . ....+.+++.+. ++..+++.. .++++..++++++++.+.+.|+++ ++.+. .+. |+++|+
T Consensus 257 ---~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-g~~~~~ 328 (398)
T 3a2b_A 257 ---DVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATE-SPILPI 328 (398)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCC-SSEEEE
T ss_pred ---HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCC-CCEEEE
Confidence 677877664 2 222333444554 455667652 345678888999999999999988 77743 444 688898
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeC--ChHhHHHHHHHHHHHHHHhh
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAA--EPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~--~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.. .+..++...++++ ||.+.||..|.. .+++||+++. +++++++++++|+++++++.
T Consensus 329 ~~~~~-----~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 329 FIRSN-----EKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp ECCCH-----HHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred EcCCH-----HHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 88631 1345677776555 999999987753 5789999974 89999999999999987754
No 83
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=7.2e-35 Score=271.46 Aligned_cols=319 Identities=11% Similarity=0.088 Sum_probs=248.2
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.+.++.+.+++.+.... +|++ ...++++.+++++.+.+| .+++ ++++|+|+++|+..++.+++++||+|++
T Consensus 43 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~ 114 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLI 114 (393)
T ss_dssp CCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence 45788888888776542 4543 245677777777776655 3566 8999999999999999999999999999
Q ss_pred cCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 103 PRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 103 ~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
+.|+|++ +...++ ..|.+++.++++. ++.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++
T Consensus 115 ~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 187 (393)
T 1vjo_A 115 GVAGYFGNRLVDMAG--RYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCRE 187 (393)
T ss_dssp EESSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EcCChhHHHHHHHHH--HcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHH
Confidence 9999998 888888 8999999998854 456899999999987 8999999999999999987 7899999999
Q ss_pred cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh------
Q 038416 180 LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC------ 253 (387)
Q Consensus 180 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------ 253 (387)
+|+++|+|++|+. . . ....+. ..+..+++.|+||+++.++ |+||+++++ ++++.+...
T Consensus 188 ~~~~li~Dea~~~-g--~-~~~~~~---~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~ 251 (393)
T 1vjo_A 188 FGTLLLVDTVTSL-G--G-VPIFLD---AWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVAN 251 (393)
T ss_dssp HTCEEEEECTTTT-T--T-SCCCTT---TTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred cCCEEEEECCccc-c--C-cCCccc---ccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCc
Confidence 9999999999992 2 1 122222 2234588999999988887 999999976 666666431
Q ss_pred --------------hhccC-CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEE
Q 038416 254 --------------LNAAS-HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG---AMF 315 (387)
Q Consensus 254 --------------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---g~~ 315 (387)
..... +++.+.+.++..+++...+.++++..++++++++++.+.|+++ ++.+. .|.+ +.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~ 329 (393)
T 1vjo_A 252 WYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLH-VEKEYRLPTL 329 (393)
T ss_dssp STTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCGGGBCSSE
T ss_pred eecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCccccCCcE
Confidence 01122 6788888888888876444557888899999999999999988 77744 4543 346
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~ 380 (387)
+++.++.. .+..++...+.+++||.+.||..|..++++||++ + .+++++++++++|++++
T Consensus 330 ~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 330 TTVCIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 67766421 2456777777655699999998877789999995 3 46778999999998875
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.4e-34 Score=267.20 Aligned_cols=322 Identities=14% Similarity=0.097 Sum_probs=249.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
+.++.+.+++.+... .+|++ ...++++.+++++.+.+|.+ +++++++|+|+++|+..++.+++++||+|+++.
T Consensus 30 ~~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~ 102 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF----SHRSK--EYRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI 102 (386)
T ss_dssp CCCHHHHHHTTSCCC----CTTSH--HHHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcHHHHHHHhcccc----cccCH--HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence 567888887766553 24543 23577777777777766644 367799999999999999999999999999999
Q ss_pred CCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh--ccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc
Q 038416 105 PGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA--DENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL 180 (387)
Q Consensus 105 p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~ 180 (387)
|+|++ +...+. ..|.+++.++++. ++.+|+++|++++ .+++++|++++|+||||.+.+ +++|.++|+++
T Consensus 103 ~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 175 (386)
T 2dr1_A 103 IGAFGKRYKEVVE--SNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEH 175 (386)
T ss_dssp SSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHT
T ss_pred CCchhHHHHHHHH--HhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHc
Confidence 99998 888888 8999999998753 4568999999998 467899999999999999987 79999999999
Q ss_pred CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH---------
Q 038416 181 GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK--------- 251 (387)
Q Consensus 181 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~--------- 251 (387)
|+++|+|++|+.+.+. .++..+ +..+++.|+||+++.++ ++||+++++ ++++.+.
T Consensus 176 ~~~li~D~a~~~~~~~----~~~~~~---~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~ 239 (386)
T 2dr1_A 176 DKLVFVDAVSAMGGAD----IKFDKW---GLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYF 239 (386)
T ss_dssp TCEEEEECTTTBTTBC----CCTTTT---TCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTT
T ss_pred CCeEEEEccccccCcc----cccccc---CCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEE
Confidence 9999999999965431 122222 34589999999987652 389999976 5666552
Q ss_pred -------hh---hhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEE
Q 038416 252 -------GC---LNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKPQ---GAMFVM 317 (387)
Q Consensus 252 -------~~---~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~~~ 317 (387)
.. ....++++.+.+.++..+++...+. .+++..++++++++++.+.|+++ ++.+. .+. .+.++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~ 317 (386)
T 2dr1_A 240 DIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITA 317 (386)
T ss_dssp CHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEE
T ss_pred eHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEE
Confidence 11 1234567788888888888753333 47788899999999999999988 77744 443 367888
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+.++.. .+..++...+.++ ||.+.+|..+...+++||+++ .+++++++++++|+++++++.
T Consensus 318 ~~~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 318 VLTPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp EECCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 887631 1456777777555 999999987666789999997 689999999999999988754
No 85
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-34 Score=271.16 Aligned_cols=333 Identities=14% Similarity=0.164 Sum_probs=247.4
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCC------CCCCCC--CCCcHHHHHHHHHHHhhcCCCCC-CCCCEEEcC
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAH------YNCYSP--TLGVPSARRGIADYLNRDLPYKL-SPEDVYLTL 80 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~ 80 (387)
++++..+.+ + +.|+.+.+++.+.+.... ...|+. ..+..++|+.++++++ . +++++++|+
T Consensus 29 ~i~l~~~~~----~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~ 97 (420)
T 1t3i_A 29 LVYLDNAAT----S-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIVYTR 97 (420)
T ss_dssp CEECBTTTC----C-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEEES
T ss_pred eEEecCCcc----C-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEEcC
Confidence 344555555 3 678999999999887521 122332 2456888999999883 3 568999999
Q ss_pred ChHHHHHHHHHhh----cCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 81 GCSQAIEISLSVL----ARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 81 g~~~a~~~~~~~l----~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
|+++|+..++.++ +++||+|+++.|+|++ +...++ ..|.+++.++++ .++.+|++++++++++++++|
T Consensus 98 g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v 173 (420)
T 1t3i_A 98 NATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAA--KTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLV 173 (420)
T ss_dssp SHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH--HHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEE
T ss_pred ChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHH--hcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEE
Confidence 9999999999999 8999999999999998 556667 789999988875 455789999999998899999
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
++++|+||||..++ +++|.++|+++|+++|+|++|+.+.. ...+..+. ..+++.|+||.++++| +||+
T Consensus 174 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~~ 241 (420)
T 1t3i_A 174 TVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGFL 241 (420)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEEE
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEEE
Confidence 99999999999998 88999999999999999999985321 11222232 3588999999887777 8999
Q ss_pred EeeCCCCcccchhHHHHHHhhhh---------------------ccCCcchHHHHHHH-HHhhhccHHHHHHHHHHHHHH
Q 038416 233 VTSDPNGILQNSGFVDSIKGCLN---------------------AASHPVTFIQAAVP-RIVDETNEAFFAKIIGLLKET 290 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 290 (387)
++++ ++++.+..... +..+.+++.+.++. .+++...+..+++..++++++
T Consensus 242 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 313 (420)
T 1t3i_A 242 YGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVEL 313 (420)
T ss_dssp EECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9875 67666654321 11234444444433 345443334567888899999
Q ss_pred HHHHHHHhhcCCCCCCCCCCC-----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------CCCCe
Q 038416 291 ADICYERIKEIPCITCPVKPQ-----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV--------GMKNW 357 (387)
Q Consensus 291 ~~~~~~~l~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~ 357 (387)
++.+.+.|++++++.+. .+. .+.++++.++. .+..++.. .+.++||.+.+|..| +..++
T Consensus 314 ~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~~ 385 (420)
T 1t3i_A 314 THYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAG------LHASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASGS 385 (420)
T ss_dssp HHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETT------BCHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCCC
T ss_pred HHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECC------CCHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCCe
Confidence 99999999998888744 443 24455556652 13455655 457779999998543 33689
Q ss_pred EEEEeeC--ChHhHHHHHHHHHHHHHHhhh
Q 038416 358 LRIAFAA--EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 358 ~Ri~~~~--~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+||+++. ++++++.+++.|+++++.+++
T Consensus 386 iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 386 ARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999974 899999999999999887653
No 86
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.2e-33 Score=263.69 Aligned_cols=310 Identities=16% Similarity=0.138 Sum_probs=230.4
Q ss_pred CCCCCCCcHHHHHHHHHHhc---C-CCCCCCCCCCCcH---HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHh
Q 038416 20 GVSLLSDSTVAEDAVVDALR---T-AHYNCYSPTLGVP---SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSV 92 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~~~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~ 92 (387)
..|++++++.+.+++.+... + .....|+. .+.+ ++|+.++++++ . +++++++|+++++..++.+
T Consensus 26 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g~~ai~~~~~~ 96 (404)
T 1e5e_A 26 IPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSGMGAIAATVLT 96 (404)
T ss_dssp SCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHH
T ss_pred CCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCChHHHHHHHHHH
Confidence 34488888888877776654 2 22345776 4555 89999999983 2 4788888889999999999
Q ss_pred hcCCCCeEEEcCCCCcchHH----HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHH
Q 038416 93 LARPGANILIPRPGYPLYEI----HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 93 l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 168 (387)
++++||+|+++.|+|+++.. .++ ..|.++..+++. |++++++++++++++|++++|+||||.+++
T Consensus 97 l~~~gd~Vl~~~~~y~~~~~~~~~~~~--~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~-- 165 (404)
T 1e5e_A 97 ILKAGDHLISDECLYGCTHALFEHALT--KFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPTLKIID-- 165 (404)
T ss_dssp HCCTTCEEEEESCCCHHHHHHHHTHHH--HTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTTCCCCC--
T ss_pred HhCCCCEEEEeCCCchhHHHHHHHHHH--HcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCCCcccC--
Confidence 99999999999999998887 677 789999988763 789999999889999999999999999987
Q ss_pred HHHHHHHHHHh-cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhH
Q 038416 169 HLQKIARTARN-LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGF 246 (387)
Q Consensus 169 ~~~~l~~~~~~-~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~ 246 (387)
+++|+++|++ +|+++|+|++|+.+.+. .++ .+ +..+++.|+||+|+++|.|+ ||+++++ ++
T Consensus 166 -l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~--------~~ 228 (404)
T 1e5e_A 166 -MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA--------DL 228 (404)
T ss_dssp -HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred -HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--------HH
Confidence 8999999999 99999999999986643 122 22 35699999999999999998 9999976 66
Q ss_pred HH-HHHhhhhc--cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCCCCCC
Q 038416 247 VD-SIKGCLNA--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP--------------CITCPVK 309 (387)
Q Consensus 247 ~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~ 309 (387)
++ .+...... +...+++.++++...++. +..+.++...+.+.+.+.+++.+ ++.+. .
T Consensus 229 ~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 302 (404)
T 1e5e_A 229 LQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIA-K 302 (404)
T ss_dssp HHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHH-H
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHH-H
Confidence 66 67665442 456778888888777765 33444555556666656665443 22211 1
Q ss_pred C----CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------------------------C-CCeE
Q 038416 310 P----QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------------------------M-KNWL 358 (387)
Q Consensus 310 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------------------~-~~~~ 358 (387)
+ .++++.| +++. ..+....++++.|| +.+|..|+ . ++++
T Consensus 303 ~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~i 372 (404)
T 1e5e_A 303 KQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMI 372 (404)
T ss_dssp HHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEE
T ss_pred hhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeE
Confidence 1 1454444 6652 23445567788898 44544333 1 5799
Q ss_pred EEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 359 RIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 359 Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
|||++. |+++++++.|+++++...
T Consensus 373 Ris~g~--e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 373 RLSVGI--EDADELIADFKQGLDALL 396 (404)
T ss_dssp EEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred EEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 999988 889999999988887654
No 87
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=4.9e-34 Score=266.87 Aligned_cols=320 Identities=15% Similarity=0.146 Sum_probs=239.2
Q ss_pred CCcHHHHHHHHHHhcCCC--CCC------CCCCCCcHHHHHHHHHHHhhcCCCCC-CCCCEEEcCChHHHHHHHHHhh--
Q 038416 25 SDSTVAEDAVVDALRTAH--YNC------YSPTLGVPSARRGIADYLNRDLPYKL-SPEDVYLTLGCSQAIEISLSVL-- 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~--~~~------y~~~~~~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l-- 93 (387)
+.|+.+.+++.+.+.... ... |....+..++|+.++++++ . ++++|++|+|+++|+..++.++
T Consensus 34 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~~~~ 107 (406)
T 1kmj_A 34 QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELVFVRGTTEGINLVANSWGN 107 (406)
T ss_dssp CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEEESSHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEEeCChhHHHHHHHHHhhh
Confidence 578899999999887531 111 1123456788999999883 3 5689999999999999999999
Q ss_pred --cCCCCeEEEcCCCCcchH----HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 94 --ARPGANILIPRPGYPLYE----IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 94 --~~~g~~vl~~~p~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
+++||+|+++.|+|++.. ..++ ..|.+++.++++. ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 108 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~- 182 (406)
T 1kmj_A 108 SNVRAGDNIIISQMEHHANIVPWQMLCA--RVGAELRVIPLNP--DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENP- 182 (406)
T ss_dssp HHCCTTCEEEEETTCCGGGTHHHHHHHH--HHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC-
T ss_pred hcCCCCCEEEEecccchHHHHHHHHHHH--hCCCEEEEEecCC--CCCcCHHHHHHHhccCCeEEEEeCCCccccCcCC-
Confidence 899999999999997643 3456 6788999888753 4578999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|.++|+++|+++|+|++|+.+. ....+..+ +..+++.|+||.++++| +||+++++ +++
T Consensus 183 --l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~~---~~d~~~~s~~K~~g~~G--~G~~~~~~--------~~~ 243 (406)
T 1kmj_A 183 --LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGILYVKE--------ALL 243 (406)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHH---TCSEEEEEGGGTTSCTT--CEEEEECH--------HHH
T ss_pred --HHHHHHHHHHcCCEEEEEchhhcCC----CCCccccc---CCCEEEEEchhccCCCC--cEEEEEeH--------HHH
Confidence 8899999999999999999998632 11122222 34588999999988777 89999975 666
Q ss_pred HHHHhhhh----------------------ccCCcchHHHHH-HHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 248 DSIKGCLN----------------------AASHPVTFIQAA-VPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 248 ~~~~~~~~----------------------~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
+.+..... +..+.+++.+.+ +..+++...+.++++..++++++++++.+.|+++|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 323 (406)
T 1kmj_A 244 QEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_dssp HHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred hhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 66653321 112234444444 3355554333457788888999999999999998888
Q ss_pred CCCCCC--CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------CCCCeEEEEeeC--ChHhHHHH
Q 038416 305 TCPVKP--QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV--------GMKNWLRIAFAA--EPATLEDG 372 (387)
Q Consensus 305 ~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~~Ri~~~~--~~e~~~~~ 372 (387)
.+. .+ .++++ ++.++. .+..++... +.++||.+.+|..| +.++++||+++. ++++++++
T Consensus 324 ~~~-~~~~~~~~~-~~~~~~------~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~ 394 (406)
T 1kmj_A 324 TLY-GPQNRLGVI-AFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRL 394 (406)
T ss_dssp EEE-SCTTCCSEE-EEEETT------CCHHHHHHH-HHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHH
T ss_pred EEe-cCCCcCCEE-EEEECC------CCHHHHHHH-HhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHH
Confidence 744 55 55544 445542 144556654 46779999998743 346899999964 89999999
Q ss_pred HHHHHHHHHHh
Q 038416 373 LERIKAFCQRH 383 (387)
Q Consensus 373 ~~~l~~~~~~~ 383 (387)
++.|+++++.+
T Consensus 395 ~~~l~~~~~~l 405 (406)
T 1kmj_A 395 VTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988765
No 88
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=4.1e-34 Score=265.35 Aligned_cols=324 Identities=13% Similarity=0.084 Sum_probs=238.8
Q ss_pred CCcHHHHHHHHHHhcCCCCC-------CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---
Q 038416 25 SDSTVAEDAVVDALRTAHYN-------CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~-------~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--- 94 (387)
++++.+.+++.+.+...... .|....+..++|+.+++++ ++++++|++|+|+++++..++.++.
T Consensus 12 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~~~~~~ 85 (384)
T 1eg5_A 12 RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKTVAETF 85 (384)
T ss_dssp CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHHHHHHHHHHhhhhhc
Confidence 78999999999988752110 0111234578999999998 4567899999999999999999997
Q ss_pred -CCCCeEEEcCCCCcchHHHh---hccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHH
Q 038416 95 -RPGANILIPRPGYPLYEIHA---AGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 -~~g~~vl~~~p~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++||+|+++.|+|+++...+ . ..|.+++.++++. ++.+|+++|++++++++++|++++|+||||.+++ +
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~ 158 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLS--MKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---V 158 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHH--HTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---H
T ss_pred cCCCCEEEECCCCchHHHHHHHHHH--hcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcccccC---H
Confidence 79999999999999876655 6 6799999888753 4578999999999888999999999999999999 6
Q ss_pred HHHHHHHHhcC--cEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 171 QKIARTARNLG--IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 171 ~~l~~~~~~~~--~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++|.++|+++| +++|+|++|+. ... ...+..+ +..+++.|+||.++++| +||+++++.-. +..
T Consensus 159 ~~i~~l~~~~~~~~~li~Dea~~~---~~~-~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~~~~------~~~ 223 (384)
T 1eg5_A 159 EDVTRIVKKKNKETLVHVDAVQTI---GKI-PFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRKGVP------IRP 223 (384)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTT---TTS-CCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECTTSC------CCC
T ss_pred HHHHHHHHhcCCceEEEEEhhhhc---CCc-ccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcCCCc------ccc
Confidence 88889999999 99999999982 221 1122222 34588999999988888 79999976210 011
Q ss_pred HHHh----hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEEecCc
Q 038416 249 SIKG----CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG--AMFVMVKLNV 322 (387)
Q Consensus 249 ~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~~~ 322 (387)
.+.. .....++++.+.+.++..+++.. .+++++..++++++++.+.+.|++ +++.+...+.+ +.++++.++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~ 301 (384)
T 1eg5_A 224 LIHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPN 301 (384)
T ss_dssp SBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTT
T ss_pred ccccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCC
Confidence 1111 01134567888888888888753 346788889999999999999988 47774422221 2355555542
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++...+ .++||.+.+|..|.. .+++||+++ .+++++++++++|+++++
T Consensus 302 ------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 374 (384)
T 1eg5_A 302 ------IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS 374 (384)
T ss_dssp ------CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1455666665 678999999876642 368999997 689999999999999998
Q ss_pred Hhhh
Q 038416 382 RHAK 385 (387)
Q Consensus 382 ~~~~ 385 (387)
++++
T Consensus 375 ~~~~ 378 (384)
T 1eg5_A 375 FLDL 378 (384)
T ss_dssp HC--
T ss_pred HHHh
Confidence 7653
No 89
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.6e-33 Score=260.47 Aligned_cols=333 Identities=13% Similarity=0.068 Sum_probs=243.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC----CC--CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY----NC--YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~--y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
.+++.+.+++ .+++.++.+.+++.+.+..... .. |+......++|+.++++++ . ++.+++++|
T Consensus 44 ~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~--~~~i~~~sG 112 (399)
T 3tqx_A 44 EVLNFCANNY---LGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T--DDTILYSSC 112 (399)
T ss_dssp EEEECSSCCT---TSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C--SEEEEESCH
T ss_pred eEEEeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C--CcEEEECch
Confidence 4556656533 2345789999999988865110 11 2222336888999998883 2 234444556
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIIN 156 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~ 156 (387)
++++..++.+++++||.|+++.|+|.++...++ ..|.++..++. .|++++++++++ ++++|++++
T Consensus 113 t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 113 FDANGGLFETLLGPEDAIISDELNHASIIDGIR--LCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHH--SCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHH--HcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 889999999999999999999999999999999 99999988875 367788887765 789999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEee
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
|+||||.+++ +++|.++|+++|+++|+|++|+...+...........+ ..+..++++|+||+++ |.+.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999999 88999999999999999999973222222111121121 1234589999999987 4455999987
Q ss_pred CCCCcccchhHHHHHHhhh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 236 DPNGILQNSGFVDSIKGCL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
+ ++++.+.... ..+.++++..+.++...++... .+.++..++++++++++.+.|+++ ++.+. +..
T Consensus 259 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~ 326 (399)
T 3tqx_A 259 K--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV--PGN 326 (399)
T ss_dssp H--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC--CCS
T ss_pred H--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC--CCC
Confidence 6 6777777642 2344677777777777776422 557888899999999999999988 77733 445
Q ss_pred eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC---CCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG---MKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+.++|+.++.. .+..++...+++ +||.+.|+..+. ..+++|++++ .+++++++++++|+++++++.
T Consensus 327 ~~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 327 HPIIPVMLGDA-----QLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp SSEEEEEEECH-----HHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 66778777532 134567776654 699999865442 2368999995 689999999999999998753
No 90
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.3e-33 Score=263.06 Aligned_cols=321 Identities=14% Similarity=0.057 Sum_probs=242.7
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
+++++.+.+++.+.+.. +|.+ .....++|+.+++++ +++++ +|++|+|+++++..++.+++++||+|
T Consensus 28 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 97 (393)
T 2huf_A 28 SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGHGGMEATLCNLLEDGDVI 97 (393)
T ss_dssp CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence 57889999988776643 2322 235678888888888 34554 89999999999999999999999999
Q ss_pred EEcCCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+++.|+|+++ ...++ ..|.+++.++++. ++.+|++++++++++ ++++|++++|+||||..+| +++|.++|
T Consensus 98 l~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~~~ 170 (393)
T 2huf_A 98 LIGHTGHWGDRSADMAT--RYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG---LEGVGALC 170 (393)
T ss_dssp EEEESSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred EEECCCcchHHHHHHHH--HcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---HHHHHHHH
Confidence 9999999874 33445 6899999998753 346899999999987 8999999999999999998 78999999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHhhh--
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-- 254 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-- 254 (387)
+++|+++|+|++++.. .....+..+ +..+++.|+||++ +++|+ ||+++++ ++++.+....
T Consensus 171 ~~~~~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~sK~l~g~~G~--G~~~~~~--------~~~~~~~~~~~~ 233 (393)
T 2huf_A 171 HQHNCLLIVDTVASLG----GAPMFMDRW---EIDAMYTGSQKVLGAPPGI--TPVSFSH--------RAVERYKRRNTK 233 (393)
T ss_dssp HHTTCEEEEECTTTBT----TBCCCTTTT---TCSEEECCSSSTTCCCSSC--EEEEECH--------HHHHHHHTCSSC
T ss_pred HHcCCEEEEEcccccC----CCCcchhhc---CccEEEECCCcccccCCCe--EEEEECH--------HHHHHHhhcCCC
Confidence 9999999999998731 111122222 3458889999974 56775 9999865 6777665431
Q ss_pred --h--------------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-
Q 038416 255 --N--------------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ- 311 (387)
Q Consensus 255 --~--------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 311 (387)
. ...+++...+.++..+++...+..+++..++++++++++.+.|+++ ++.+. .+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 311 (393)
T 2huf_A 234 VKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELY-ADPK 311 (393)
T ss_dssp CSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCGG
T ss_pred CceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCcc
Confidence 0 1124556666666666665333457788889999999999999988 77744 442
Q ss_pred --ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHHHHhhh
Q 038416 312 --GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 312 --~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+.++++.++.. .+..++...|++++||.+.+|..+...+++||++ + .+++++++++++|++++++++.
T Consensus 312 ~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 312 DRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp GBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 244777777521 1456777777666799999998776678999999 5 4688999999999999987654
No 91
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=2.8e-33 Score=260.61 Aligned_cols=322 Identities=13% Similarity=0.048 Sum_probs=238.8
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.+.++.+.+++.+.+... . .+....+..++|+.+++++ +++++++++|+|+++++..++.+++++||+|+++
T Consensus 18 ~~~~~~v~~a~~~~~~~~-~-~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~ 89 (392)
T 2z9v_A 18 VNAYPEVLRGLGRTVLYD-Y-DPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEAAAASLISPDDVVLNL 89 (392)
T ss_dssp CCCCHHHHHHTTSCCCCT-T-SHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEE
T ss_pred cCCCHHHHHHHhcccccc-c-cHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEe
Confidence 468889999888766531 1 1111234578888888887 3467899999999999999999999999999999
Q ss_pred CCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 104 RPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 104 ~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
.|+|+++ ...+. ..|.+++.++++. ++.+|+++++++++ +++++|++++|+||||..++ +++|.++|++
T Consensus 90 ~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 162 (392)
T 2z9v_A 90 ASGVYGKGFGYWAK--RYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALVSA 162 (392)
T ss_dssp ESSHHHHHHHHHHH--HHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHHHH
T ss_pred cCCcccHHHHHHHH--HcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHHHH
Confidence 9999875 33445 5788999998753 33689999999984 57899999999999999998 7899999999
Q ss_pred cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHhhh----
Q 038416 180 LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL---- 254 (387)
Q Consensus 180 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~---- 254 (387)
+|+++|+|++|+.. .....+..+. ..+++.|+||++ +++| +||+++++ ++++.++...
T Consensus 163 ~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~~--------~~~~~l~~~~~g~~ 225 (392)
T 2z9v_A 163 HGAYLIVDAVSSFG----GMKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVSE--------RAWAKMKANPLAPR 225 (392)
T ss_dssp TTCEEEEECTTTBT----TBSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEECH--------HHHHHHHTCTTSCC
T ss_pred cCCeEEEEcccccC----Cccccccccc---ceEEEecCcccccCCCc--eeEEEECH--------HHHHHhhhccCCCC
Confidence 99999999999842 1111232222 348899999964 3455 59999875 6666664310
Q ss_pred -----------------hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ce
Q 038416 255 -----------------NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----GA 313 (387)
Q Consensus 255 -----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~g 313 (387)
...++++...+.++..+++...+..+++..++++++++++.+.|+++ ++.+. .|. .+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~ 303 (392)
T 2z9v_A 226 ASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVW-AASDSIASP 303 (392)
T ss_dssp SSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCT
T ss_pred ceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCCccccCC
Confidence 12234555566666666664333336788889999999999999888 77744 322 35
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHHHHhh
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++++.++.. .+..++...+.+++||.+.+|..+...+++||++ + .+++++++++++|+++++++.
T Consensus 304 ~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 304 TTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp TEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 6777777521 1456777777555699999988766678999996 4 689999999999999998765
No 92
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=7.9e-33 Score=256.89 Aligned_cols=325 Identities=12% Similarity=0.031 Sum_probs=240.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC-CC---CCCC--CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT-AH---YNCY--SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
.+++.+.|.+ +++++++.+.+++.+.+.. .. ...| +...+..++|+.++++++ ++ +.++++++
T Consensus 40 ~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~--~~i~~~sG 108 (384)
T 1bs0_A 40 QYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS--RALLFISG 108 (384)
T ss_dssp EEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS--EEEEESCH
T ss_pred eEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC--cEEEeCCc
Confidence 3455555432 3556889999999998865 21 1123 334567899999999983 32 45555556
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC---ceEEEEeCCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN---TVAIVIINPGN 159 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~n 159 (387)
++++..++.++.++||.|+++.|+|..+...++ ..|.+++.+|. .|+++++++++++ ++++++++|+|
T Consensus 109 t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 109 FAANQAVIAAMMAKEDRIAADRLSHASLLEAAS--LSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH--TSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHH--HcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 899999999999999999999999999998999 89999988873 3788999888653 77888899999
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
|||.+++ +++|.++|+++|+++|+|++|+.+.+. +... ...++. ...++++|+||+++++| ||+++++
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~- 249 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS--CWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS- 249 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH--HHHTTC-CCSEEEEESSSTTSSCC---EEEEECH-
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCch--HHhcCC-CCcEEEeeccchhhccC---cEEEeCH-
Confidence 9999998 788999999999999999999865432 2211 112221 22388999999998766 9999865
Q ss_pred CCcccchhHHHHHHhhh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 238 NGILQNSGFVDSIKGCL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
++++.+.... ..+.+++++.+.++.++++...+.+.++..++++++++.+.+.|+++ ++. + .+..++
T Consensus 250 -------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~ 319 (384)
T 1bs0_A 250 -------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSA 319 (384)
T ss_dssp -------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSS
T ss_pred -------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCC
Confidence 6777776542 22335778888877777765322256778889999999999999988 676 3 345566
Q ss_pred EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeC--ChHhHHHHHHHHHHH
Q 038416 315 FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAA--EPATLEDGLERIKAF 379 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~--~~e~~~~~~~~l~~~ 379 (387)
++|+.++.. .+..++...+. ++||.+.+|..++. .+++||+++. +++++++++++|+++
T Consensus 320 ~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 320 IQPLIVGDN-----SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp BCCEEEESH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCH-----HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 777777521 13456666665 45999999877643 3789999964 899999999998764
No 93
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=5.2e-34 Score=263.54 Aligned_cols=316 Identities=12% Similarity=0.078 Sum_probs=233.9
Q ss_pred CCCCcHHHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHH-HHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh
Q 038416 23 LLSDSTVAEDAVVDALRTAH--------YNCYSPTLGVPSARRG-IADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~lr~~-ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l 93 (387)
..++++.+.+++.+.+.... ...|.+..+..++|+. ++++++ .+ +|++|+|+++|+..++.++
T Consensus 18 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~~~~g~t~a~~~~~~~~ 89 (371)
T 2e7j_A 18 GGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VARVTNGAREAKFAVMHSL 89 (371)
T ss_dssp TCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEEEeCChHHHHHHHHHHH
Confidence 35688999999999876531 1123445788999999 999983 33 9999999999999999999
Q ss_pred cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-----cCceEEEEeCCCCCccccCCHH
Q 038416 94 ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-----ENTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~nptG~~~~~~ 168 (387)
+++||+|+++.|+|+++...++ ..|.+++.++.....++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~-- 165 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVAAE--RAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD-- 165 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHHHH--HTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC--
T ss_pred hCCCCEEEEccCcchHHHHHHH--HcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC--
Confidence 9999999999999999998888 89999999982113346889999999987 68899999999999999998
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|.++|+++|+++|+|++|+.+... .++..++. .+++.|+||+++.+ .|+||+++++ ++++
T Consensus 166 -~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~~~~~--------~~~~ 228 (371)
T 2e7j_A 166 -VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVMGMKE--------EWAE 228 (371)
T ss_dssp -HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEEEECT--------TTTT
T ss_pred -HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEEEEec--------hhhh
Confidence 688899999999999999999974421 12333332 38899999987655 4999999976 3444
Q ss_pred H-HHhhhh---c-----cCCcchHHHHHHHHHhhhccHHHHHHHHHHH--HHHHHHHHHHhhcCCCCCCCCCCC--ceEE
Q 038416 249 S-IKGCLN---A-----ASHPVTFIQAAVPRIVDETNEAFFAKIIGLL--KETADICYERIKEIPCITCPVKPQ--GAMF 315 (387)
Q Consensus 249 ~-~~~~~~---~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~--~g~~ 315 (387)
. +..... . .++++...+.++..+++...+ +..+++ +++++++.+.|+++ ++.+. .+. .+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~ 302 (371)
T 2e7j_A 229 IVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQL-GDNPHNHDL 302 (371)
T ss_dssp TTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEE-SSSSCCSSE
T ss_pred hhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEe-cCCCccCce
Confidence 4 333221 1 345566666666566654221 456667 78888899999888 77744 343 3567
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC------CCeEE-EEee---CChHhHHHHHHHHHHHHHHh
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM------KNWLR-IAFA---AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~R-i~~~---~~~e~~~~~~~~l~~~~~~~ 383 (387)
+|++++ +..++...+ .++||.+.| ..+.. ++++| ++++ .+++++++++++|+++++++
T Consensus 303 ~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 303 MFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 888774 244566655 477999888 43322 67899 9997 68999999999999988764
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=2.7e-32 Score=256.70 Aligned_cols=334 Identities=13% Similarity=0.059 Sum_probs=245.3
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC-CC-CCCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT-AH-YNCYSPTLG----VPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~~~~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
.+++++.+++ .++..++.+.+++.+++.. .. ...|....| ..++++.++++++ . ++.+++++|
T Consensus 65 ~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~sG 133 (427)
T 2w8t_A 65 DTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFSTG 133 (427)
T ss_dssp EEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEESCH
T ss_pred eEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEecCc
Confidence 3556666542 3556889999999998865 21 112222233 4788888888872 2 356667777
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----CceEEEEeCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----NTVAIVIINPG 158 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~ 158 (387)
++++..++.++.++||.|+++.|+|.++...++ ..|.+++.++. .|+++|++++++ ++++|++++++
T Consensus 134 s~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~--~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~ 204 (427)
T 2w8t_A 134 YMANLGIISTLAGKGEYVILDADSHASIYDGCQ--QGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY 204 (427)
T ss_dssp HHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHH--HSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHH--HcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence 789999999999999999999999999999988 88998887763 488999998865 68899999999
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCC
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
||||.+++ +++|.++|+++|+++|+||+|+.+.+..........++ ..+.++++.|+||+++++| ||+++++
T Consensus 205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~- 277 (427)
T 2w8t_A 205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH- 277 (427)
T ss_dssp TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC-
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH-
Confidence 99999988 88999999999999999999998776532211111122 1234688999999988666 9999875
Q ss_pred CCcccchhHHHHHHhhh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 038416 238 NGILQNSGFVDSIKGCL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM 314 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 314 (387)
++++.+.... ..+.++++..+.++..+++... .+++..++++++++++.+.|+++ ++.+...+..+.
T Consensus 278 -------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 347 (427)
T 2w8t_A 278 -------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSA 347 (427)
T ss_dssp -------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSS
T ss_pred -------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCC
Confidence 4555555431 2345566767666667776532 24677888889999999999887 676331332567
Q ss_pred EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEeeC--ChHhHHHHHHHHHHHHHHhhh
Q 038416 315 FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFAA--EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~~--~~e~~~~~~~~l~~~~~~~~~ 385 (387)
++|+.++.. .+..++...+++ +||.+.++..|.. .+++||+++. +++++++++++|+++++++.+
T Consensus 348 ~~~~~~~~~-----~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 348 IVAVMLEDQ-----EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp EEEEEESSH-----HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCH-----HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 888887531 134566666654 5999999876654 3589999974 899999999999999987653
No 95
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3.3e-33 Score=259.90 Aligned_cols=319 Identities=13% Similarity=0.093 Sum_probs=237.3
Q ss_pred CCCcHHHHHHHHHHhcCCC---CC---CCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cC
Q 038416 24 LSDSTVAEDAVVDALRTAH---YN---CYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-AR 95 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~ 95 (387)
.+.|+.+.+++.+.+.... .. .|+. ..+..++|+.+++++ ++++++|++|+|+++++..++.++ .+
T Consensus 26 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~~~~~ 99 (390)
T 1elu_A 26 GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITDNVTTGCDIVLWGLDWH 99 (390)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESSHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeCChHHHHHHHHhCCCCC
Confidence 3577889999998876421 01 2332 246788999999998 456789999999999999999999 79
Q ss_pred CCCeEEEcCCCCcchHHH----hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 96 PGANILIPRPGYPLYEIH----AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
+||+|+++.|+|+++... ++ ..|.+++.+++++.+++.+|++++++++++++++|++++|+||||.+++ ++
T Consensus 100 ~gd~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~ 174 (390)
T 1elu_A 100 QGDEILLTDCEHPGIIAIVQAIAA--RFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP---LA 174 (390)
T ss_dssp TTCEEEEETTCCHHHHHHHHHHHH--HHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC---HH
T ss_pred CCCEEEEecCcccHHHHHHHHHHH--HhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecC---HH
Confidence 999999999999987643 45 5788999998764356778999999999888999999999999999999 88
Q ss_pred HHHHHHH----hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 172 KIARTAR----NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 172 ~l~~~~~----~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+|.++|+ ++|+++|+|++|+... ....+.. ....+++.|++|+ ..+|.++||+++++ +++
T Consensus 175 ~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~~~---~~~d~~~~s~~K~-~~~~~g~G~~~~~~--------~~~ 238 (390)
T 1elu_A 175 EIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDFSR---LEVDYYAFTGHKW-FAGPAGVGGLYIHG--------DCL 238 (390)
T ss_dssp HHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCTTT---SCCSEEEEESSST-TCCCTTCEEEEECT--------TTG
T ss_pred HHHHHHhhhhhhcCcEEEEEcccccCC----cCCChhh---cCCCEEEcccccc-ccCCCceEEEEECH--------HhH
Confidence 8999999 9999999999998421 1112222 2345889999994 35566799999975 344
Q ss_pred HHHHhh-----------------------hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 248 DSIKGC-----------------------LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 248 ~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
+.+... ....++++...+.++..+++...+ .++++..++++++++.+.+.|+++++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 318 (390)
T 1elu_A 239 GEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPH 318 (390)
T ss_dssp GGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 443321 111245566677766666654332 24788889999999999999999878
Q ss_pred CCCCCC-CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 304 ITCPVK-PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 304 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+.++.. +..+.+++++++.. .+..++...+ .++||.+.+|. .++++||+++ .+++++++++++|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 319 VHCLATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp EEESCSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred cEEecCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 774421 22344555577421 1455677766 56799999875 3589999984 689999999998864
No 96
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.1e-32 Score=257.31 Aligned_cols=322 Identities=16% Similarity=0.100 Sum_probs=234.9
Q ss_pred CCCCcHHHHHHHHHHhcC-CC-----CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 23 LLSDSTVAEDAVVDALRT-AH-----YNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~-~~-----~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
.++.+|.+.+++.+.+.. .. ...|+...+..++|+.++++++ . +++|++++|++ ++..++..+.
T Consensus 58 ~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG~~-a~~~~~~~l~~~ 129 (401)
T 2bwn_A 58 GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSSAYN-ANDATLSTLRVL 129 (401)
T ss_dssp SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESCHHH-HHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECCcHH-HHHHHHHHHhcC
Confidence 345678899999998864 11 1134444567899999999983 2 46778877655 7777777654
Q ss_pred CCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHH
Q 038416 95 RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
++||.|+++.|+|+++...++ ..|.+++.++.+ |++++++.++ +++++|++++|+||||.+++ +
T Consensus 130 ~~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l 197 (401)
T 2bwn_A 130 FPGLIIYSDSLNHASMIEGIK--RNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP---I 197 (401)
T ss_dssp STTCEEEEETTCCHHHHHHHH--HSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---H
T ss_pred CCCCEEEECchhhHHHHHHHH--HcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC---H
Confidence 589999999999999988888 899999888752 6788888775 57899999999999999998 7
Q ss_pred HHHHHHHHhcCcEEeecccccccccCCCCCccccccCC-CccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS-IVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
++|.++|+++|+++|+|++|+...++..+...+..... ....++++|+||+++++| ||+++++ ++++.
T Consensus 198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~--------~~~~~ 266 (401)
T 2bwn_A 198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASA--------RMVDA 266 (401)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECH--------HHHHH
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCH--------HHHHH
Confidence 89999999999999999999954343221111111111 123588999999998887 9999864 67777
Q ss_pred HHhhh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 250 IKGCL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 250 ~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+.... ....+.+++.+.++..+++...+..+++..++++++++++.+.|+++ ++.+. .+.++ ++|+.++..
T Consensus 267 l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~-~~~~~~~~~--- 340 (401)
T 2bwn_A 267 VRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPII-DHGSH-IVPVVIGDP--- 340 (401)
T ss_dssp HHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSS-CEEEECCCH---
T ss_pred HHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCC-eEEEEeCCh---
Confidence 66432 22233445677777777765444445778888999999999999887 77744 55544 778877531
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCC---CeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMK---NWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+++++||.+.|+..|+.+ +++|++++ .+++++++++++|+++++++
T Consensus 341 --~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 341 --VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp --HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred --HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 134566667765779999998766543 58999996 58999999999999887653
No 97
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=5.9e-33 Score=254.57 Aligned_cols=318 Identities=15% Similarity=0.088 Sum_probs=235.8
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.++++.+.+++.+.+... ..+....+..++|+.+++++ +++++++++|+|+++++..++.++.++||+|+++
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 10 VRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp CCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 478899999998876531 11111234578899999998 3456899999999999999999999999999999
Q ss_pred CCCCcchH--HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc-
Q 038416 104 RPGYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL- 180 (387)
Q Consensus 104 ~p~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~- 180 (387)
.|+|+++. ..+. ..|.+++.++++. ++.+|++++++ +++++|++++|+||||.+++ +++|.++|+++
T Consensus 82 ~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 151 (352)
T 1iug_A 82 VYGKFSERFYEIAL--EAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKN 151 (352)
T ss_dssp ECSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred eCCchhHHHHHHHH--HcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence 99999865 4445 6899999998753 34678888876 57899999999999999988 78899999999
Q ss_pred -CcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH---------H
Q 038416 181 -GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS---------I 250 (387)
Q Consensus 181 -~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~---------~ 250 (387)
|+++|+|++|+.. .....+..+ +..+++.|+||+++.+ .++||+++++ +.++. +
T Consensus 152 ~~~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~ 215 (352)
T 1iug_A 152 PEGLVGADMVTSLL----VGEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDL 215 (352)
T ss_dssp TTCEEEEECTTTBT----TBCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCH
T ss_pred CCCEEEEECCcccc----Ccceecccc---CeeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeH
Confidence 9999999999731 111122222 2347889999954322 3479999865 44433 1
Q ss_pred H----hh--hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-ceEEEEEecCcc
Q 038416 251 K----GC--LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-GAMFVMVKLNVS 323 (387)
Q Consensus 251 ~----~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~~~~~~~~~ 323 (387)
. .. ....++++...+.++..+++...+. +++..++++++++++.+.|+++ ++.+. .+. .++++|+.++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 292 (352)
T 1iug_A 216 ARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPV-PKRFSPAVAAFYLPEG 292 (352)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSBCTTCEEEECCTT
T ss_pred HHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCccc-ccccCCeEEEEEcCCC
Confidence 1 11 1234566777777777777653333 7788889999999999999988 77744 453 566788877531
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+..++...+. ++||.+.+|..+...+++||+++ .+++++++++++|+++++++.
T Consensus 293 -----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 293 -----VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp -----CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred -----CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 14566777765 55999999875545689999996 478999999999999988764
No 98
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.5e-32 Score=258.38 Aligned_cols=322 Identities=15% Similarity=0.134 Sum_probs=233.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCC----------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPT----------LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~----------~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
++++.+.+++.+.+.......++.. ....++++.+++++ ++++++|++|+|+++|+..++.++.
T Consensus 33 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~~ggt~a~~~a~~~l~ 106 (423)
T 3lvm_A 33 PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVFTSGATESDNLAIKGAA 106 (423)
T ss_dssp CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCChHHHHHHHHHHHH
Confidence 6789999999988772111111111 13367788888887 4567899999999999999999887
Q ss_pred C----CCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 R----PGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 ~----~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+ +||+|+++.|+|+++...+. ....|.++..+++++ ++.+|+++|+++++++++++++++|+||||.+++
T Consensus 107 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~--- 181 (423)
T 3lvm_A 107 NFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD--- 181 (423)
T ss_dssp HHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred HhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCcEEEEEeCCCCCCccccC---
Confidence 4 79999999999998876663 005699999998754 5578999999999989999999999999999999
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++|+++|+|++|+... ....+..+ +..+++.|+||.++.+| +|++++++. ..+.
T Consensus 182 l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~--------~~~~ 244 (423)
T 3lvm_A 182 IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQL---KVDLMSFSGHKIYGPKG--IGALYVRRK--------PRVR 244 (423)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTTTS---CCSEEEEESTTTTSCSS--CEEEEECBT--------TBCC
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChhhc---CCCEEEechHHhcCCCC--eEEEEEecc--------ccCC
Confidence 7889999999999999999987522 11122222 23488999999877666 899998752 2222
Q ss_pred HHhhh--------hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEE
Q 038416 250 IKGCL--------NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG---AMFVMV 318 (387)
Q Consensus 250 ~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---g~~~~~ 318 (387)
+.... ....+++...+.++..++... +..+++..++++++++.+.+.|+++|++.+. .+.. +.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~ 322 (423)
T 3lvm_A 245 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIKDIEEVYLN-GDLEHGAPNILNV 322 (423)
T ss_dssp CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEE-SCSTTBCTTEEEE
T ss_pred CCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe-CCccccCCCeEEE
Confidence 22211 123455666776666666542 2347888899999999999999989888754 3332 234444
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHH
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIK 377 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~ 377 (387)
.++. .+..++...+ .+ |.+.+|..|.. .+++||+++ .++++++++++.|+
T Consensus 323 ~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~ 393 (423)
T 3lvm_A 323 SFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVR 393 (423)
T ss_dssp EETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHH
Confidence 4532 1455565555 44 88888876543 378999996 47899999999999
Q ss_pred HHHHHhhh
Q 038416 378 AFCQRHAK 385 (387)
Q Consensus 378 ~~~~~~~~ 385 (387)
++++++++
T Consensus 394 ~~~~~~~~ 401 (423)
T 3lvm_A 394 KSIGRLRD 401 (423)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhc
Confidence 99988764
No 99
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.6e-32 Score=254.63 Aligned_cols=319 Identities=14% Similarity=0.098 Sum_probs=238.5
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC--CCEEEcCChHHHHHHHHHhhcCCCCeEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP--EDVYLTLGCSQAIEISLSVLARPGANIL 101 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~g~~vl 101 (387)
.++++.+.+++.+.+... . .+.......++++.++++++ .++ +++++|+|+++++. ++..++++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~-~-~~~~~~~~~~~~~~la~~~~------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGF-T-SKEFVEALAYSLKGLRYVMG------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCT-T-SHHHHHHHHHHHHHHHHHHT------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhcccccc-c-cHHHHHHHHHHHHHHHHHhC------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 478889988887765421 1 11112345677777887773 444 78999999999999 9999999999999
Q ss_pred EcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHH
Q 038416 102 IPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTAR 178 (387)
Q Consensus 102 ~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~ 178 (387)
++.|+|++ +...+. ..|.+++.++++. ++.+|++++++++++ ++++|++++|+||||..++ +++|.++|+
T Consensus 82 ~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 154 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFK--RYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIR 154 (384)
T ss_dssp EECSSHHHHHHHHHHT--TSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred EecCCcchHHHHHHHH--HcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence 99999975 556667 8899999998854 446899999999987 7999999999999999998 788999999
Q ss_pred hcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH--------
Q 038416 179 NLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI-------- 250 (387)
Q Consensus 179 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~-------- 250 (387)
++|+++|+|++++.... ...+... +..+++.|+||+++. +.++|++++++ ++++.+
T Consensus 155 ~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~ 218 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAG 218 (384)
T ss_dssp GGEEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCC
T ss_pred hcCCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCc
Confidence 99999999999884221 1122222 234889999998642 24489999876 565555
Q ss_pred -----Hhhh----------hcc-CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---
Q 038416 251 -----KGCL----------NAA-SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--- 311 (387)
Q Consensus 251 -----~~~~----------~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 311 (387)
.... ... .+++...+.++..++....+..+++..++++++++++.+.|+++ ++.+. .+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~ 296 (384)
T 3zrp_A 219 YYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIV-ARRPES 296 (384)
T ss_dssp STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-CSSGGG
T ss_pred ccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEc-cCcccc
Confidence 1111 111 25566667766666665444557888899999999999999998 77744 444
Q ss_pred -ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 312 -GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 312 -~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+.++++.++. .+..++...+. ++||.+.+|..+.. +++||+++ .+++++++++++|+++++++.
T Consensus 297 ~~~~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 297 YSNTVTGVILKV------ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp BCSSEEEEECSS------SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCccEEEEECCC------CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 46677777764 14567777765 45999999874433 89999985 589999999999999998765
No 100
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.2e-32 Score=253.64 Aligned_cols=328 Identities=13% Similarity=0.066 Sum_probs=238.7
Q ss_pred CCcHHHHHHHHHHhcCCCC--C-CCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---
Q 038416 25 SDSTVAEDAVVDALRTAHY--N-CYSP----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~--~-~y~~----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--- 94 (387)
++++.+++++.+.+..... . .|.. .....++|+.+++++ +++++++++|+|+++|+..++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~~ 84 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMRN 84 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence 6899999999998874211 1 1321 124577888888887 3466799999999999999999998
Q ss_pred -CCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 95 -RPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 95 -~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
++||+|+++.|+|+++..... ....|.+++.++++. ++.+|+++|++++++++++|++++|+||||..++ +++
T Consensus 85 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~ 159 (382)
T 4eb5_A 85 ARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEE 159 (382)
T ss_dssp GGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHH
T ss_pred cCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHH
Confidence 899999999999998765553 014799999998853 4568999999999888999999999999999998 788
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHH-H
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI-K 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~-~ 251 (387)
|.++|+++|++ |+|++|+. +.....+..+ +..+++.|+||.++++| +|++++++...+. ...... .
T Consensus 160 i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~~ 226 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASV----GQIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGGQ 226 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTB----TTBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSCT
T ss_pred HHHHHHHCCCE-EEEcchhc----CCcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCCc
Confidence 99999999999 99999983 1111122222 23488999999977666 7999987631111 000000 0
Q ss_pred hhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEEecCcccccCC
Q 038416 252 GCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG---AMFVMVKLNVSMLEDI 328 (387)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~ 328 (387)
......++++...+.++..+++... +++++..++++++++.+.+.|+++|++.+. .+.+ +.++++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 298 (382)
T 4eb5_A 227 ENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY------ 298 (382)
T ss_dssp GGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT------
T ss_pred cccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccCCCCEEEEEeCC------
Confidence 0111234556666666666666433 357888899999999999999988887744 4431 4466666652
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..++...+ .++||.+.+|..|.. .+++||+++ .+++++++++++|+++++++++
T Consensus 299 ~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 299 IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1456677666 567999999875432 478999997 5899999999999999988765
No 101
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=1.6e-32 Score=255.87 Aligned_cols=321 Identities=12% Similarity=0.062 Sum_probs=242.4
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC-C-CCcHHHHHHHHHHHhhcCCCCCCCC-CEEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP-T-LGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~-~-~~~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
.++++.+.+++.+.... +|.+ . ....++|+.+++++ +.+++ +|++|+|+++++..++.+++++||+|
T Consensus 27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v 96 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 45778888877665432 3433 1 23688999999998 34666 79999999999999999999999999
Q ss_pred EEcCCCCcchH--HHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+++.|+|+++. ..++ ..|.+++.++++. ++.+|++++++++++ ++++|++++|+||||..++ +++|.++|
T Consensus 97 l~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~ 169 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSE--RYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQIC 169 (396)
T ss_dssp EEEESSHHHHHHHHHHH--HTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred EEEcCCcccHHHHHHHH--HcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHH
Confidence 99999999874 4667 7899999998753 557899999999987 8999999999999999998 78899999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh----
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC---- 253 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~---- 253 (387)
+++|+++|+|++|+.. . ....+..+. ..+++.|++|+++. +.++|++++++ +.++.+...
T Consensus 170 ~~~~~~li~Dea~~~g---~-~~~~~~~~~---~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~ 233 (396)
T 2ch1_A 170 HQHDCLLIVDAVASLC---G-VPFYMDKWE---IDAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKS 233 (396)
T ss_dssp HHTTCEEEEECTTTBT---T-BCCCTTTTT---CCEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCC
T ss_pred HHcCCEEEEEcccccc---C-CccchhhcC---cCEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcc
Confidence 9999999999999831 1 112222222 23667899997542 24469999875 555555321
Q ss_pred --------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-
Q 038416 254 --------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG- 312 (387)
Q Consensus 254 --------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 312 (387)
....++++...+.++..+++...+.++++..++++++++++.+.|+++ ++.+. .+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~ 311 (396)
T 2ch1_A 234 KVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIF-VKDPR 311 (396)
T ss_dssp SCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS-SCSGG
T ss_pred cceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeec-cCCcc
Confidence 112235667778877777776444567888899999999999999988 77744 4443
Q ss_pred ---eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHHHHhh
Q 038416 313 ---AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 313 ---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+.++++.++.. .+..++...|++++||.+.+|..+..++++||++ + .+++++++++++|+++++++.
T Consensus 312 ~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 312 HRLPTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp GBCTTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 23677777521 2466777777666799999987666678999999 4 378999999999999998765
No 102
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.7e-32 Score=251.46 Aligned_cols=323 Identities=15% Similarity=0.052 Sum_probs=235.4
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC------
Q 038416 23 LLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP------ 96 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~------ 96 (387)
..++++.+.+++.+.+.... .++....+..++++.+++++.+.++ .++++|++|+|+++++..++.++..+
T Consensus 39 ~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~ 115 (397)
T 3f9t_A 39 CSNVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRR 115 (397)
T ss_dssp CCCCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhh
Confidence 44677899999999887531 1222212345666666666665554 46789999999999999999998765
Q ss_pred -------CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHH
Q 038416 97 -------GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 97 -------g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~ 168 (387)
||+|+++.|+|+++...++ ..|.+++.++++. ++.+|+++|++++++ +++++++++|+||||.+.+
T Consensus 116 ~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~-- 189 (397)
T 3f9t_A 116 KGLSKNEHPKIIVPITAHFSFEKGRE--MMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN-- 189 (397)
T ss_dssp TTCCCCSSCEEEEETTCCTHHHHHHH--HHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC--
T ss_pred hcccCCCCeEEEECCcchhHHHHHHH--HcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC--
Confidence 8999999999999999999 8999999998853 467899999999988 8999999999999999977
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCC-------ccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPY-------VPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
+++|.++|++||+++|+|++|+.+.+..... .....+.. +..+++.|++|+ +.+|.++|+++++++
T Consensus 190 -l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~---- 262 (397)
T 3f9t_A 190 -IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI---- 262 (397)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG----
T ss_pred -HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCH----
Confidence 8889999999999999999999755422110 00011111 334788999998 567789999998752
Q ss_pred cchhHHHHHHhhhhcc---------CC---cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 242 QNSGFVDSIKGCLNAA---------SH---PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 242 ~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
.+.+.+....... .+ .+...+.++...+ ....+.+..+++.++++++.+.|+++ ++..+ .
T Consensus 263 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 334 (397)
T 3f9t_A 263 ---GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYL---GREGQRKIVNECMENTLYLYKKLKEN-NFKPV-I 334 (397)
T ss_dssp ---GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-S
T ss_pred ---HHHHhhccCCccccCCCccccccccccchHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-c
Confidence 2333332111100 11 2334444444444 34667888888899999999999998 77755 4
Q ss_pred CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
+..+.++++.++ +..++...+ .++||.+.++.. ++++||+++ .+++++++++++|+++++
T Consensus 335 ~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 335 EPILNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CCSSSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred CCCccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 445566677665 245666666 455999999763 589999996 589999999999988764
No 103
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=3.3e-32 Score=254.92 Aligned_cols=321 Identities=12% Similarity=-0.009 Sum_probs=240.1
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCC-EEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSPED-VYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
.++++.+.+++.+... .+|.+ .....++++.++++++ .+.++ +++++|+++++..++.+++++||+|
T Consensus 22 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V 91 (411)
T 3nnk_A 22 INADPRVLRAMSSQLI----GQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSRAGIEAILVSAIRPGDKV 91 (411)
T ss_dssp CCCCHHHHHHHTSCCC----CTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhhcccc----ccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence 4678888888776432 23322 1223566677777663 34444 7889999999999999999999999
Q ss_pred EEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+++.|+|++ +...+. ..|.+++.++++ .++.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|
T Consensus 92 l~~~~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 164 (411)
T 3nnk_A 92 LVPVFGRFGHLLCEIAR--RCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEIC 164 (411)
T ss_dssp EEEECSHHHHHHHHHHH--HTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred EEecCCchHHHHHHHHH--HcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHH
Confidence 999999987 888888 899999999874 3457899999999986 8999999999999999988 78899999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh---
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL--- 254 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~--- 254 (387)
+++|+++|+|++++... ....+... +..+++.|++|+++ ++.++|++++++ ++++.+....
T Consensus 165 ~~~~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l~-~~~g~g~~~~~~--------~~~~~~~~~~~~~ 228 (411)
T 3nnk_A 165 RRYDALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCLG-GPSGTSPITLSA--------RMEEAIRRRKCVE 228 (411)
T ss_dssp HHHTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTTC-CCSSEEEEEECH--------HHHHHHHTTCCCC
T ss_pred HHcCCEEEEECCcccCC----cccchhcc---CCcEEEecCccccC-CCCceEEEEECH--------HHHHHHhhccccc
Confidence 99999999999987422 11112222 23488999999742 234589999876 6776665432
Q ss_pred ----------------------------------hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 255 ----------------------------------NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 255 ----------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
...++++...+.++..+++...+..+++..+++.++++++.+.|++
T Consensus 229 ~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 308 (411)
T 3nnk_A 229 EGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA 308 (411)
T ss_dssp GGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1224556667777767666544444788889999999999999998
Q ss_pred CCCCCCCCCCCc---eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHH
Q 038416 301 IPCITCPVKPQG---AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLE 374 (387)
Q Consensus 301 ~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~ 374 (387)
+ ++.+. .+.+ +.++++.++.. .+..++...+++++||.+.+|.....++++||++ + .++++++++++
T Consensus 309 ~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~ 381 (411)
T 3nnk_A 309 M-GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLS 381 (411)
T ss_dssp T-TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred c-CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHH
Confidence 7 77744 3432 56777777531 2456777777777799999986555578999998 4 37899999999
Q ss_pred HHHHHHHHhh
Q 038416 375 RIKAFCQRHA 384 (387)
Q Consensus 375 ~l~~~~~~~~ 384 (387)
+|+++++++.
T Consensus 382 ~l~~~l~~~~ 391 (411)
T 3nnk_A 382 ALEAVLNYLK 391 (411)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 104
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=2.4e-32 Score=255.18 Aligned_cols=330 Identities=13% Similarity=0.065 Sum_probs=244.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcC-CCC---CCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRT-AHY---NCYS--PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~y~--~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
.+++.+.+++ ..+..++.+.+++.+.+.. ... ..|+ ...+..++|+.+++++ +.+ +.+ +++++
T Consensus 46 ~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i-~~~sG 114 (401)
T 1fc4_A 46 HVINFCANNY---LGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAI-LYSSC 114 (401)
T ss_dssp EEEECCCSCT---TSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEE-EESCH
T ss_pred cEEEeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEE-EeCCh
Confidence 4555655543 1123589999999998864 211 0121 1345788999999998 333 445 44556
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIIN 156 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~ 156 (387)
++++..++++++++||.|+++.|+|.++...++ ..|.+++.++. .|++++++++++ ++++|++++
T Consensus 115 s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 185 (401)
T 1fc4_A 115 FDANGGLFETLLGAEDAIISDALNHASIIDGVR--LCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDG 185 (401)
T ss_dssp HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHH--TSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEES
T ss_pred HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHH--HcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeC
Confidence 779999999999999999999999988888888 89999888763 378888888765 688999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc-cccc-CCCCCccccccCCCccEEEEecCcccc-cccccceEEEE
Q 038416 157 PGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN-HLAF-GSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLV 233 (387)
Q Consensus 157 p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~-~~~~-~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~ 233 (387)
|+||||.+++ +++|.++|+++|+++|+|++|+ ++.. .+........+.. +..++++|+||++ +++| ||++
T Consensus 186 ~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~~ 258 (401)
T 1fc4_A 186 VFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYTA 258 (401)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEEE
T ss_pred CcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEEE
Confidence 9999999998 8999999999999999999996 6653 3333222222222 3458899999998 5554 9999
Q ss_pred eeCCCCcccchhHHHHHHhhh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGCL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
+++ ++++.+.... ..+.+++++.+.++...++...+ .++..++++++++++.+.|+++ ++.+. +
T Consensus 259 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~ 325 (401)
T 1fc4_A 259 ARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAA-GFTLA--G 325 (401)
T ss_dssp ECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHT-TCCBC--C
T ss_pred cCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCccc--C
Confidence 865 6777776543 13557788888888887765221 3567788889999999999988 77733 6
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
..++++|+.++.. .+..++...+ .++||.+.+|..|+. .+++||+++ .+++++++++++|+++++++.
T Consensus 326 ~~~~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 326 ADHAIIPVMLGDA-----VVAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp SSSSEEEEEEECH-----HHHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcCCh-----HHHHHHHHHH-HHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 6788888887531 1345666666 455999999877654 358999996 689999999999999988764
No 105
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.7e-31 Score=247.34 Aligned_cols=328 Identities=13% Similarity=0.075 Sum_probs=233.0
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCC---------CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPT---------LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA 94 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~---------~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 94 (387)
.++++.+.+++.+.+... ..++.. ....++++.+++++ +++++++++|+|+++++..++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTES--FGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCHHHHHHHHHHHHTS--CCCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhh--cCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhh
Confidence 467899999999988752 122211 11236666666666 3567889999999999999999987
Q ss_pred ----CCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 95 ----RPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 95 ----~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
++||+|+++.++|+++..... ....|.++..++++ .++.+|+++|+++++++++++++++|+||||.+++
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~--- 156 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP--- 156 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---
Confidence 899999999999998766544 00369999999885 34578999999999989999999999999999988
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|.++|+++|+ +|+|++|+... ....+.... ..+++.|+||.++++| +|++++++..... +.+...
T Consensus 157 ~~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~--~~~~~~ 224 (382)
T 4hvk_A 157 VEEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ--PVILGG 224 (382)
T ss_dssp HHHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETTCCCC--CSSCSS
T ss_pred HHHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCccCcC--cccccC
Confidence 7788999999999 99999987421 111222222 3488999999876666 7888877532111 000000
Q ss_pred HHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEEecCccccc
Q 038416 250 IKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG---AMFVMVKLNVSMLE 326 (387)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---g~~~~~~~~~~~~~ 326 (387)
.........+++...+.++..++.. .+.++++..++++++++.+.+.|+++|++.+. .+.. +.++++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 298 (382)
T 4hvk_A 225 GQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY---- 298 (382)
T ss_dssp CTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT----
T ss_pred CCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEECC----
Confidence 0001112345566677777666653 34577888999999999999999998888744 3332 2355555542
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..++...+ .++||.+.+|..|.. .+++|++++ .++++++++++.|+++++++++
T Consensus 299 --~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 299 --IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp --CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1455666655 667999999876543 478999996 4789999999999999988765
No 106
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.1e-32 Score=252.61 Aligned_cols=318 Identities=15% Similarity=0.062 Sum_probs=235.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILI 102 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~ 102 (387)
.++|+.+.+++.+.+.. ..|+. ..+..++|+.++++++ .+.+++++++|+|+++++..++.++.+ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 47889999988877653 12221 2346788888888873 122467899999999999999999876 89999
Q ss_pred cCCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 103 PRPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 103 ~~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
+.++|+++ ...++ ..|.+++.++++. ++.+|++++++++++ ++++|++++|+||||..++ +++|.++|++
T Consensus 80 ~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~ 152 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAA--LHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKE 152 (353)
T ss_dssp EECSHHHHHHHHHHH--HTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred EcCCCchHHHHHHHH--HcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHH
Confidence 99999874 45556 7899999998853 456899999999987 8899999999999999998 7788999999
Q ss_pred cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHH-------
Q 038416 180 LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIK------- 251 (387)
Q Consensus 180 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~------- 251 (387)
+|+++|+|++|+.. . ...++..++. .+++.|++|++ +++| +||+++++ ++++.++
T Consensus 153 ~~~~li~D~a~~~~---~-~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~ 215 (353)
T 2yrr_A 153 AGALFFLDAVTTLG---M-LPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYL 215 (353)
T ss_dssp HTCEEEEECTTTTT---T-SCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTT
T ss_pred cCCeEEEEcCcccc---c-ccccccccCc---eEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccc
Confidence 99999999999632 1 1222333322 37888999964 4455 79999976 5555443
Q ss_pred ------h---hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEEec
Q 038416 252 ------G---CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFVMVKL 320 (387)
Q Consensus 252 ------~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~~~~~ 320 (387)
. .....++++...+.++..+++...+..+++..++++++++++.+.|+++ ++.+. .+. .++++++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~ 293 (353)
T 2yrr_A 216 DLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRP 293 (353)
T ss_dssp CHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEEC
T ss_pred cHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEEC
Confidence 0 1122345666777777677765434447788899999999999999988 77744 343 455667777
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHH-HHHHHHHHHHHH
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLE-DGLERIKAFCQR 382 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~-~~~~~l~~~~~~ 382 (387)
+.. .+..++...+. ++||.+.+|..|..++++|++++ .++++++ +++++|+++++.
T Consensus 294 ~~~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 294 PEG-----VDADRLVRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp CTT-----CCHHHHHHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred CCC-----CCHHHHHHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 521 14566777665 45999999987777789999993 5788888 999999988764
No 107
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=2.8e-32 Score=253.75 Aligned_cols=322 Identities=13% Similarity=0.036 Sum_probs=240.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHHHHHHhhcCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
.++++.+.+++.+.... ++.+ .....++++.+++++. .+. ++|++|+|+++++..++.++.++||+|
T Consensus 32 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMIG----HMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp CCCCHHHHHHTTCCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhcccccC----cccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 46788888877664321 2222 1234566777777763 333 359999999999999999999999999
Q ss_pred EEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+++.++|++ +...+. ..|.++..++++. ++.+|+++|++++++ ++++|++++|+||||..++ +++|.++|
T Consensus 102 l~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 174 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIAD--RIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELC 174 (393)
T ss_dssp EEEESSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred EEEeCCchhHHHHHHHH--HcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHH
Confidence 999988863 356677 7899999998753 346899999999987 8999999999999999988 78899999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccc-cccccceEEEEeeCCCCcccchhHHHHHHhhhh-
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRW-IVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN- 255 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~-~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~- 255 (387)
++||+++|+|++|+... ....+... +..+++.|+||++ +.+| +|++++++ ++++.+.....
T Consensus 175 ~~~~~~li~De~~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~g~~~~~~--------~~~~~~~~~~~~ 237 (393)
T 3kgw_A 175 HRYQCLLLVDSVASLGG----VPIYMDQQ---GIDIMYSSSQKVLNAPPG--ISLISFND--------KAKYKVYSRKTK 237 (393)
T ss_dssp HHTTCEEEEECTTTTTT----SCCCTTTT---TCCEEEEESSSTTCCCSS--CEEEEECH--------HHHHHHHTCSSC
T ss_pred HHcCCEEEEECCccccC----cccchhhc---CCCEEEecCcccccCCCc--eeEEEECH--------HHHHHHhccCCC
Confidence 99999999999987321 11111112 2347888999976 3444 89999876 67777654221
Q ss_pred -----------------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-
Q 038416 256 -----------------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ- 311 (387)
Q Consensus 256 -----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 311 (387)
..++++...+.++..++....+.++++..+++.++++.+.+.|+++ ++.+. .+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 315 (393)
T 3kgw_A 238 PVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDP 315 (393)
T ss_dssp CSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSG
T ss_pred CCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCCh
Confidence 1235566777777777765445567888999999999999999988 77743 232
Q ss_pred ---ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHHHHhhh
Q 038416 312 ---GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 312 ---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+.++++.++.. .+..++...+++++||.+.+|..+..++++||++ + .+++++++++++|+++++++.+
T Consensus 316 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 316 EIRLPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp GGBCSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred hhcCCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 245666776531 2456777777666699999998776788999998 5 3899999999999999988765
Q ss_pred c
Q 038416 386 K 386 (387)
Q Consensus 386 ~ 386 (387)
+
T Consensus 391 ~ 391 (393)
T 3kgw_A 391 N 391 (393)
T ss_dssp C
T ss_pred c
Confidence 3
No 108
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1e-31 Score=252.05 Aligned_cols=321 Identities=13% Similarity=0.042 Sum_probs=234.1
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCCCCEE-EcCChHHHHHHHHHhhcCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSP--TLGVPSARRGIADYLNRDLPYKLSPEDVY-LTLGCSQAIEISLSVLARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~~~i~-~~~g~~~a~~~~~~~l~~~g~~v 100 (387)
.+.++.+.+++.+ .....|+. .....++++.+++++ +.+++.++ +++|+++++..++.+++++||+|
T Consensus 20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~V 89 (416)
T 3isl_A 20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRAGIEAVLASVIEPEDDV 89 (416)
T ss_dssp CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHHHHHHHHHHhcCCCCEE
Confidence 3566666665544 22223332 122455666666666 34556565 88999999999999999999999
Q ss_pred EEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 101 LIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 101 l~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
+++.|+|++ +...++ ..|.+++.++++. ++.+|+++++++++ +++++|++++|+||||..++ +++|.++|
T Consensus 90 l~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 162 (416)
T 3isl_A 90 LIPIYGRFGYLLTEIAE--RYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEAC 162 (416)
T ss_dssp EEEESSHHHHHHHHHHH--HTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHH
T ss_pred EEecCCcccHHHHHHHH--hcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHH
Confidence 999999987 777788 8999999999853 34689999999997 68999999999999999988 88899999
Q ss_pred HhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh---
Q 038416 178 RNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL--- 254 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~--- 254 (387)
+++|+++|+|++++.... ...+... +..+++.|++|++ .++.++|++++++ ++++.+....
T Consensus 163 ~~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~l-~g~~g~g~~~~~~--------~~~~~~~~~~~~~ 226 (416)
T 3isl_A 163 RTEDALFIVDAVATIGGC----EVKVDEW---KIDAAIGGTQKCL-SVPSGMAPITYNE--------RVADVIAARKKVE 226 (416)
T ss_dssp HHTTCEEEEECTTTTTTS----CCCTTTT---TCSEEECCSSSTT-CCCSSEEEEEECH--------HHHHHHHTC----
T ss_pred HHcCCEEEEECCccccCC----Ccchhhc---CCCEEEecCcccc-CCCCCeEEEEECH--------HHHHHhhcccccc
Confidence 999999999999874221 1122222 2348899999973 2234589999875 5666555211
Q ss_pred -----------------------------------h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh
Q 038416 255 -----------------------------------N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 255 -----------------------------------~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (387)
. ..++++...+.++..+++...+..+++..+++.++++++.+.|
T Consensus 227 ~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (416)
T 3isl_A 227 RGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGI 306 (416)
T ss_dssp --------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1 1335566677777777765333337888999999999999999
Q ss_pred hcCCCCCCCCCCCc---eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHh-HHHH
Q 038416 299 KEIPCITCPVKPQG---AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPAT-LEDG 372 (387)
Q Consensus 299 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~-~~~~ 372 (387)
+++ ++.+. .+.. +.++++.++.. .+..++...+++++||.+.+|.....++++||+++ .++++ ++++
T Consensus 307 ~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~ 379 (416)
T 3isl_A 307 KAM-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFV 379 (416)
T ss_dssp HHT-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHH
T ss_pred HHc-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHH
Confidence 986 77744 4433 45777777531 24667878776666999999876556789999993 34555 9999
Q ss_pred HHHHHHHHHHhh
Q 038416 373 LERIKAFCQRHA 384 (387)
Q Consensus 373 ~~~l~~~~~~~~ 384 (387)
+++|+++++++.
T Consensus 380 ~~~l~~~~~~~~ 391 (416)
T 3isl_A 380 LAGLEAVLLRHN 391 (416)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999998753
No 109
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=2.7e-31 Score=248.61 Aligned_cols=318 Identities=12% Similarity=0.073 Sum_probs=232.8
Q ss_pred CCCCCcHHHHHHHHHHhcCCC--C----CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC
Q 038416 22 SLLSDSTVAEDAVVDALRTAH--Y----NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
.+++.+|.+.+++.+++.... . ..++......++++.++++++ .+..++++++++++..++.++++
T Consensus 70 l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sGt~a~~~~l~~~~~ 141 (409)
T 3kki_A 70 LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLSQSGWNANVGLLQTICQ 141 (409)
T ss_dssp TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCC
T ss_pred cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEecchHHHHHHHHHHhcC
Confidence 357788999999999987621 1 112222446788999999883 23455566678999999999999
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~ 174 (387)
+||.|+++.|+|.++...+. ..|.+++.++. .|+++|++++++ ++++|++++|+||||.+++ +++|.
T Consensus 142 ~gd~Vl~~~~~~~~~~~~~~--~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~---l~~l~ 209 (409)
T 3kki_A 142 PNTNVYIDFFAHMSLWEGAR--YANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP---LAELV 209 (409)
T ss_dssp TTCEEEEETTSCHHHHHHHH--HTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC---HHHHH
T ss_pred CCCEEEECCCcCHHHHHHHH--HcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC---HHHHH
Confidence 99999999999999988888 88999887754 479999998875 5899999999999999998 88999
Q ss_pred HHHHhcCcEEeecccccccccC--CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh
Q 038416 175 RTARNLGIIVIADEVYNHLAFG--STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG 252 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~ 252 (387)
++|++||+++|+||+|+.+.+. +.......... .+..+++.|+||+++++| ||+++++ ++++.+..
T Consensus 210 ~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~g---g~v~~~~--------~~~~~~~~ 277 (409)
T 3kki_A 210 NISKEFGCALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRA---GAIWCNN--------EVNRCVPF 277 (409)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSC---EEEEESS--------SGGGTHHH
T ss_pred HHHHHcCCEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCc---eEEEECH--------HHHHHHHH
Confidence 9999999999999999974432 22222111111 123488899999987664 9999876 45555544
Q ss_pred hh---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 253 CL---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 253 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
.. .++...++..+.++.+.++...+ .++..++++++++++.+.|+++ ++.+. ..++++|+.++.. .
T Consensus 278 ~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~-----~ 346 (409)
T 3kki_A 278 ISYPAIFSSTLLPYEAAGLETTLEIIES--ADNRRQHLDRMARKLRIGLSQL-GLTIR---SESQIIGLETGDE-----R 346 (409)
T ss_dssp HCHHHHHSBCCCHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHTT-TCCCC---CSSSEEEEEEESH-----H
T ss_pred hCcCccccCCCcHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCccC---CCCCEEEEEeCCH-----H
Confidence 31 23344566666666666654221 2567788889999999999988 66622 4677888877532 1
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCC---CCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGM---KNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~---~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+..++...+++ +||.+.++..+.. .+++|++++ .+++++++++++|+++++..
T Consensus 347 ~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 347 NTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 24456666655 4999987543322 468999996 58999999999999998763
No 110
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=7.6e-32 Score=247.55 Aligned_cols=318 Identities=12% Similarity=0.107 Sum_probs=221.6
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.++++.+.+++.+.... ....|+......++++.+++++ + .++++++|+|+++++..++.++.++||.|+++
T Consensus 18 ~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~ 89 (356)
T 1v72_A 18 AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAANALCLSAMTPPWGNIYCH 89 (356)
T ss_dssp CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHHHHHHHTSCCTTEEEEEC
T ss_pred cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHHHHHHHHhcCCCCEEEEc
Confidence 56789999999988642 1234544334455666666665 3 23469999999999999999999999999999
Q ss_pred CCCCcchHHH--hhccCC--CceeeeeccCCCCCccCChhhHHH-hhcc-------CceEEEEeCCCCCccccCCHHHHH
Q 038416 104 RPGYPLYEIH--AAGSNN--NLEARHYDLLPEKRWEVDLDGVEA-LADE-------NTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 104 ~p~~~~~~~~--~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
.|+|+++... +. .. |.+++.++.+ ++.+|+++|++ ++++ ++++|++++|+| ||.++|.++++
T Consensus 90 ~~~~~~~~~~~~~~--~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~ 163 (356)
T 1v72_A 90 PASHINNDECGAPE--FFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIE 163 (356)
T ss_dssp TTSHHHHSSTTHHH--HHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHH
T ss_pred CccchhhhhchHHH--HHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHH
Confidence 9999775544 55 55 8888888763 35789999999 8875 578999999986 99999999999
Q ss_pred HHHHHHHhcCcEEeecccccccc--cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLA--FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+|.++|++||+++|+|++|..+. +.+.....+ .+..... +++.|+||+ +.+ ...||+++++ +++++
T Consensus 164 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~~-~G~g~~~~~~--------~~~~~ 231 (356)
T 1v72_A 164 AIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GVL-AAEAIVLFNT--------SLATE 231 (356)
T ss_dssp HHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TCS-SCEEEEESSG--------GGHHH
T ss_pred HHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CCc-CccEEEEECH--------HHHhh
Confidence 99999999999999999998542 122222211 1111112 445689998 432 2234777754 56666
Q ss_pred HHhhhhccCC--c-chHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 250 IKGCLNAASH--P-VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 250 ~~~~~~~~~~--~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+......... . .......+...++. ..+.+..+++.++++++.+.|++++++.+. .|..++++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~----- 302 (356)
T 1v72_A 232 MSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGTEANILFCRLD----- 302 (356)
T ss_dssp HHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCCCSSEEEEEEC-----
T ss_pred HHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCCCccEEEEEcC-----
Confidence 6544221111 1 22222223333332 334456677788889999999888788744 5777888888764
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++...+ .++||.+.||. |+ .+++|++++ .+++++++++++|++++++..
T Consensus 303 -----~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 303 -----SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp -----HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred -----HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 2566666 56699999887 54 789999985 588999999999998877654
No 111
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=2e-31 Score=246.64 Aligned_cols=321 Identities=12% Similarity=0.086 Sum_probs=225.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.++|+.+.+++.+.... ++.+ ...++.+.+.+++.+.++.+.+.+.+++|+|+++++..++.+++++||+|+++
T Consensus 28 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~ 101 (376)
T 3f0h_A 28 VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVI 101 (376)
T ss_dssp CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEE
Confidence 47899999888775532 2322 22344445555554444433222445569999999999999999999999999
Q ss_pred CCCCcchH--HHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 104 RPGYPLYE--IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 104 ~p~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
.|+|++.. ..+. ..|.++..++.+ .++.+|+++++++++++++++++++|+||||.++| +++|.++|+++|
T Consensus 102 ~~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 174 (376)
T 3f0h_A 102 DGGSFGHRFVQLCE--IHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNN 174 (376)
T ss_dssp ESSHHHHHHHHHHH--HTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred eCChhhHHHHHHHH--HcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHHcC
Confidence 99887643 3456 678898888874 34678999999998889999999999999999999 899999999999
Q ss_pred cEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-----
Q 038416 182 IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN----- 255 (387)
Q Consensus 182 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~----- 255 (387)
+++|+|++++.+... ..+.... ..+++.|++|+++ ++| +|++++++ ++++.+.....
T Consensus 175 ~~li~D~~~~~~~~~----~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~~~ 237 (376)
T 3f0h_A 175 MFFVCDCVSAFLADP----FNMNECG---ADVMITGSQKVLACPPG--ISVIVLAP--------RGVERVEKSKVRTMYF 237 (376)
T ss_dssp CEEEEECTTTTTTSC----CCHHHHT---CSEEEEETTTTTCCCSS--CEEEEECH--------HHHHHHHTCCCCCSTT
T ss_pred CEEEEEcCccccCcc----ccccccC---ccEEEecCcccccCCCc--eEEEEECH--------HHHHHhhcCCCCceee
Confidence 999999999864321 1122222 2388899999987 555 67888765 66666653211
Q ss_pred -------------ccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE-EEEEec
Q 038416 256 -------------AASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM-FVMVKL 320 (387)
Q Consensus 256 -------------~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-~~~~~~ 320 (387)
...+++...+.++.++++...+. .+++..++..++++++.+.|+++ ++... .+.... ++.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~ 315 (376)
T 3f0h_A 238 DLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV-SESPANGVTSVHP 315 (376)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC-CSSBBTTEEEEEE
T ss_pred cHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC-ccccCceEEEEeC
Confidence 12234444445555555543333 57888889999999999999887 45533 332222 222222
Q ss_pred CcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 321 NVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
+. .+..++...+.+++||.+.+|.....++++|++++ .+++++++++++|++++++
T Consensus 316 ~~------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 316 TT------ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp SS------SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred CC------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 11 24567777776666999999854445789999994 5899999999999998864
No 112
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1.6e-32 Score=258.30 Aligned_cols=329 Identities=16% Similarity=0.102 Sum_probs=226.6
Q ss_pred CcHHHHHHHHHHhcCCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHH---hhcCCCCeE
Q 038416 26 DSTVAEDAVVDALRTAHY--NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLS---VLARPGANI 100 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~---~l~~~g~~v 100 (387)
.++.+.+++.+++..... ..|.+..+..+||+.+++++. + . .+++|++|+|+++|+..+++ .+.++| .|
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~v 131 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSEAVENAVKIARAATKRS-GT 131 (426)
T ss_dssp TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHHHHHHHHHHHHHHHTCC-EE
T ss_pred CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHHHHHHHHHHHHHhhCCC-eE
Confidence 688999999999875321 134445678899999999883 1 1 34899999999999999988 666776 89
Q ss_pred EEcCCCCcchHH-HhhccCCCce-------------eeeeccCC---CCCccCChhhHHHhhc-----cCceEEEEe-CC
Q 038416 101 LIPRPGYPLYEI-HAAGSNNNLE-------------ARHYDLLP---EKRWEVDLDGVEALAD-----ENTVAIVII-NP 157 (387)
Q Consensus 101 l~~~p~~~~~~~-~~~~~~~g~~-------------~~~~~~~~---~~~~~~~~~~l~~~~~-----~~~~~v~l~-~p 157 (387)
++++|+|+++.. ... ..|.+ +..++++. ..++.+|+++|+++++ +++++|++. ++
T Consensus 132 i~~~p~y~~~~~~~~~--~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~ 209 (426)
T 1sff_A 132 IAFSGAYHGRTHYTLA--LTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQ 209 (426)
T ss_dssp EEETTCCCCSSHHHHH--HSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBC
T ss_pred EEECCCcCCCchHhhh--hcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEeccc
Confidence 999999987543 333 33322 45555532 1123468999999886 345555553 34
Q ss_pred CCCcc-ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 158 GNPCG-NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 158 ~nptG-~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+| || ..+|.+++++|.++|++||+++|+||+|+++.+.+... .+...+. .+.+.|+||+++. |+|+||+++++
T Consensus 210 ~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~---~~di~s~sK~~~~-GlriG~~~~~~ 283 (426)
T 1sff_A 210 GE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGV---APDLTTFAKSIAG-GFPLAGVTGRA 283 (426)
T ss_dssp TT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTS---CCSEEEECGGGGT-SSCCEEEEEEH
T ss_pred CC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCC---CCCEEEEcccccC-CCceEEEEEcH
Confidence 67 99 78899999999999999999999999999876655321 1111211 1234499999987 99999999976
Q ss_pred CCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQ 311 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~ 311 (387)
++++.+.... ..+.+++++.+.++.++++...+. +..++++++++.+.+.|++ ++.+. ...+
T Consensus 284 --------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~- 350 (426)
T 1sff_A 284 --------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIG-DVRG- 350 (426)
T ss_dssp --------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEE-EEEE-
T ss_pred --------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeE-EEEE-
Confidence 5666655322 245567888888888777643221 3445566666666666655 33222 1123
Q ss_pred ceEEEEEecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 312 GAMFVMVKLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 312 ~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.|+++|+.+..... +...+..++...++ ++||.+.||..+ .+++||+++ .+++++++++++|++++++++
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 351 LGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 37788988853100 00013445666664 569999998753 589999984 689999999999999988763
No 113
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=9.4e-32 Score=247.77 Aligned_cols=329 Identities=15% Similarity=0.112 Sum_probs=238.3
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCC-C-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSP-T-LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
+++..+| | .+.++.+.+++.+.+. ..|+. . .+..++|+.++++++. +.+++++++|+|+++++.
T Consensus 5 ~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHHH
T ss_pred cccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHHH
Confidence 3556666 3 3588999988877432 12221 1 5778999999999841 122357999999999999
Q ss_pred HHHHhhcCCCCeEEEcC-CCCcc-hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEEEEeCCCCCccc
Q 038416 88 ISLSVLARPGANILIPR-PGYPL-YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAIVIINPGNPCGN 163 (387)
Q Consensus 88 ~~~~~l~~~g~~vl~~~-p~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~ 163 (387)
.++.+++++||+|++.. +.|.. +...+. ..|.++..++++. ++.+|+++|++++++ ++++|++++|+||||.
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~ 146 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGARMVEMAG--LMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGM 146 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHHHHHHHH--HHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred HHHHHhcCCCCeEEEEeCCCccHHHHHHHH--HhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCcce
Confidence 99999999999988776 45543 556667 7899999888753 456899999999875 4788999999999999
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
++| +++|.++|+++|+++|+|++|+.... ...+... +..+++.|+||+++. +.++||+++++
T Consensus 147 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~------- 208 (366)
T 1m32_A 147 LNP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE------- 208 (366)
T ss_dssp ECC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH-------
T ss_pred ecC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH-------
Confidence 998 78999999999999999999985321 1122222 234889999997532 23479999976
Q ss_pred hhHHHHHHhhh------------------h-ccCCcchHHHHHHHHHhhhccHHH-HHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 244 SGFVDSIKGCL------------------N-AASHPVTFIQAAVPRIVDETNEAF-FAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 244 ~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
++++.+.... . ..++++...+.++..+++...+.. +++..++++++++++.+.|+++ +
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~ 286 (366)
T 1m32_A 209 -QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-G 286 (366)
T ss_dssp -HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred -HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-C
Confidence 4544433210 0 124667777777777776533322 6778889999999999999988 7
Q ss_pred CCCCCCC---CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 304 ITCPVKP---QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 304 ~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+.+. .+ ..++++|+.++.. ++ .+..++...+. ++||.+.+|..| ..+++|++++ .+++++++++++|++
T Consensus 287 ~~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 287 FNTL-LDDELHSPIITAFYSPED--PQ-YRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp CCBS-SCGGGBCSSEEEEECCCC--TT-CCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred Ceec-cCchhcCceEEEEEcCcc--CC-CCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 7744 33 3566888887630 01 14566777665 559999998766 4689999996 478999999999988
Q ss_pred HHHH
Q 038416 379 FCQR 382 (387)
Q Consensus 379 ~~~~ 382 (387)
++++
T Consensus 361 ~~~~ 364 (366)
T 1m32_A 361 AMYW 364 (366)
T ss_dssp HCTT
T ss_pred HHHh
Confidence 8754
No 114
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-31 Score=250.73 Aligned_cols=318 Identities=12% Similarity=0.112 Sum_probs=232.5
Q ss_pred CCcHHHHHHHHHHhcCCCC---CCCC----CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---c
Q 038416 25 SDSTVAEDAVVDALRTAHY---NCYS----PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL---A 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~---~~y~----~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~ 94 (387)
+.++.+.+++.+.+..... ..|. ......++|+.+++++ ++++++|++|+|+++++..++.++ .
T Consensus 37 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~al~~~~~~l~~~~ 110 (406)
T 3cai_A 37 LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGADRAVLLSLLAEASSSRA 110 (406)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESCHHHHHHHHHHHTGGGG
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCChHHHHHHHHHHHhhcc
Confidence 6789999999998874211 1232 1235678889999988 456789999999999999999987 7
Q ss_pred CCCCeEEEcCCCCcchHHHhhc--cCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 95 RPGANILIPRPGYPLYEIHAAG--SNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
++||+|+++.|+|+++...+.. ...|.+++.++++++ ++.+|+++|++++++++++|++++|+||||.+++ +++
T Consensus 111 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~ 186 (406)
T 3cai_A 111 GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNSASGTLGGVTD---LRA 186 (406)
T ss_dssp BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC---CHH
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeCCcCCccccCC---HHH
Confidence 8999999999999986554440 026889999987633 4578999999999889999999999999999998 788
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceE-EEEeeCCCCcccchhHHHHHH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLG-WLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G-~i~~~~~~~~~~~~~~~~~~~ 251 (387)
|.++|+++|+++|+|++|+. +.....+..++ ..+++.|++|.++ ++ +| |+++++ ++++.++
T Consensus 187 i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~~--------~~~~~l~ 248 (406)
T 3cai_A 187 MTKLVHDVGALVVVDHSAAA----PYRLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRDP--------SVMNSFG 248 (406)
T ss_dssp HHHHHHHTTCEEEEECTTTT----TTCCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESCH--------HHHHTSC
T ss_pred HHHHHHHcCCEEEEEccccc----CCCCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEeh--------HHHhhcC
Confidence 99999999999999999984 21112222232 3488999999864 43 89 999865 5666554
Q ss_pred hhhh----------ccCCcchHHHHHHHHHhhhccH--------------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 252 GCLN----------AASHPVTFIQAAVPRIVDETNE--------------AFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 252 ~~~~----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
.... ..++++...+.++..+++...+ .++++..++++++++++.+.|++++++.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (406)
T 3cai_A 249 SVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLI 328 (406)
T ss_dssp CCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred CcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEc
Confidence 3321 1344566666555555543221 157788888999999999999998887743
Q ss_pred CCCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCC------ccCC---CCeEEEEeeC--ChHhHHHHHH
Q 038416 308 VKPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGR------TVGM---KNWLRIAFAA--EPATLEDGLE 374 (387)
Q Consensus 308 ~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~---~~~~Ri~~~~--~~e~~~~~~~ 374 (387)
.+. .+.++++.++. .+..++...+ .++||.+.+|. .++. .+++||+++. ++++++++++
T Consensus 329 -~~~~~~~~~~~~~~~~------~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~ 400 (406)
T 3cai_A 329 -GRPEAQIPVVSFAVHK------VPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVR 400 (406)
T ss_dssp -CCCSSBCSEEEEEETT------BCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHH
T ss_pred -CCccccCCEEEEEECC------cCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHH
Confidence 442 23366776652 1455666666 56799999986 3332 4789999964 7899999999
Q ss_pred HHHH
Q 038416 375 RIKA 378 (387)
Q Consensus 375 ~l~~ 378 (387)
+|++
T Consensus 401 ~l~~ 404 (406)
T 3cai_A 401 ALAS 404 (406)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8864
No 115
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=3.8e-31 Score=244.28 Aligned_cols=332 Identities=16% Similarity=0.074 Sum_probs=224.4
Q ss_pred cccc-ccccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh
Q 038416 4 RKGQ-ETRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGC 82 (387)
Q Consensus 4 ~~g~-~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 82 (387)
..|. +++ +.+.|.+ +.++++.+.+++. . |. +...+++.+++++.+.++.. +++++++++|+
T Consensus 24 ~~g~~~v~-~~~~~~~----~~~~~~~v~~a~~----~-----~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~~~gg 85 (374)
T 2aeu_A 24 EKGRDALY-DLSGLSG----GFLIDEKDKALLN----T-----YI---GSSYFAEKVNEYGLKHLGGD-ENDKCVGFNRT 85 (374)
T ss_dssp HTCGGGCE-ECSSCCC----CCCCCHHHHHHHT----S-----TT---HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred ccCcccee-eecccCC----CCCCCHHHHHHHH----H-----hc---CchHHHHHHHHHHHHHhCCC-CcceEEEEcCh
Confidence 3565 455 6555544 6789999999886 1 11 11344555665554444422 34789999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceE-EEEeCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVA-IVIINPG 158 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~l~~p~ 158 (387)
++++..++.++ +||+|+++.|+|+++.. .+. ..|.+++.+ .|+++++++ ++++++ |++++|+
T Consensus 86 t~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~--~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~ 151 (374)
T 2aeu_A 86 SSAILATILAL--KPKKVIHYLPELPGHPSIERSCK--IVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTM 151 (374)
T ss_dssp HHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHH--HTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCT
T ss_pred HHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHH--HcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCC
Confidence 99999999988 89999999998876433 566 788888776 278999988 778999 9999999
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeeccccccccc-CCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF-GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
||||. +..++++|.++|+++|+++|+|++|+.+.. ......++ ... ..+++.|+||+ ++|+|+||+++++
T Consensus 152 nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~---~di~~~S~sK~--l~g~~~G~~~~~~- 222 (374)
T 2aeu_A 152 DLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KLG---ADLVVTSTDKL--MEGPRGGLLAGKK- 222 (374)
T ss_dssp TSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HHT---CSEEEEETTSS--SSSCSCEEEEEEH-
T ss_pred CCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-ccC---CcEEEecCccc--ccCcceEEEEECH-
Confidence 99996 668899999999999999999999987531 01010011 122 24888999998 4578999999876
Q ss_pred CCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHH----HHHHHHHhhcC---CCCCCCCC
Q 038416 238 NGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKET----ADICYERIKEI---PCITCPVK 309 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~---~~~~~~~~ 309 (387)
++++.++.... .+.+++++.+.++...++....+.+.+..+..+.. ++.+.+.|..+ +++.+...
T Consensus 223 -------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~ 295 (374)
T 2aeu_A 223 -------ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERT 295 (374)
T ss_dssp -------HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEEC
T ss_pred -------HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeC
Confidence 78888876654 34456778888888887764332233333333332 45555555543 24442224
Q ss_pred CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-CCCeEEEEeeC-C--hHhHHHHHHHHHHHHHHhhh
Q 038416 310 PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-MKNWLRIAFAA-E--PATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~Ri~~~~-~--~e~~~~~~~~l~~~~~~~~~ 385 (387)
|.+.++.|..++... ...++.+++..+++++||.+.||..|. ..+++||+++. + +++++++.+.|+++++++.+
T Consensus 296 ~~g~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 296 PTGFVIKRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp SSEEEEEEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 555555554443100 000112366677788899999997763 35789999964 2 33588888888888887654
No 116
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.8e-31 Score=243.42 Aligned_cols=318 Identities=11% Similarity=0.035 Sum_probs=229.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.++|+.+.+++.+.+.+.....+.......++.+.+.+++.+.++.. ++++|++|+|+++++..++.++.++ +.+++.
T Consensus 13 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~ 90 (362)
T 3ffr_A 13 SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNCVEK-KSFHCV 90 (362)
T ss_dssp CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHHCSS-EEEEEE
T ss_pred cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhccCC-cEEEEc
Confidence 36788999888888876532111122233355555666665555533 5678999999999999999999877 444454
Q ss_pred CCCCc-chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc-C
Q 038416 104 RPGYP-LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL-G 181 (387)
Q Consensus 104 ~p~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~-~ 181 (387)
.+.|. .+...+. ..|.++..++.+ .++.+|+++++ +++++++|++++|+||||.+++ +++|.++|+++ |
T Consensus 91 ~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~ 161 (362)
T 3ffr_A 91 NGSFSKRFYEFAG--ELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---VEDINTFRDKNKD 161 (362)
T ss_dssp CSHHHHHHHHHHH--HTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTT
T ss_pred CcHHHHHHHHHHH--HhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCC
Confidence 54444 2344666 789999998874 34678999988 7788999999999999999998 77888899999 9
Q ss_pred cEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHHHHHhhhh-----
Q 038416 182 IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN----- 255 (387)
Q Consensus 182 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~----- 255 (387)
+++|+|++|+.+... ..+.. ..+++.|+||+++ ++| +|++++++ ++++++.....
T Consensus 162 ~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~~~~~~~~~gg~~~ 222 (362)
T 3ffr_A 162 ALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVIEKSKALLAKRKSI 222 (362)
T ss_dssp SEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHHHHHHHHHHTTCCC
T ss_pred CEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHHHHhhhccccCCCC
Confidence 999999999853311 11211 2388899999987 677 57777765 56666654321
Q ss_pred -----------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----CceE
Q 038416 256 -----------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP----QGAM 314 (387)
Q Consensus 256 -----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~g~ 314 (387)
...+++...+.++..+++...+..++++.+++.++++++.+.|+++|++... .+ ..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~ 301 (362)
T 3ffr_A 223 GTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFG-VEDAKLRSMT 301 (362)
T ss_dssp CSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEES-SSCGGGBCSS
T ss_pred cccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceec-cCChhhcCCc
Confidence 1455666777777776664333447888899999999999999999888744 32 2355
Q ss_pred EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 315 FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
++|+.++. +..++...+.+ +||.+.+|..+..++++||+++ .++++++++++.|++++
T Consensus 302 ~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 302 TIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 66766653 35677777655 4999999877666889999995 47899999999987753
No 117
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-31 Score=243.73 Aligned_cols=319 Identities=13% Similarity=0.088 Sum_probs=229.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
++++.+.+++.+.+. .|....+..++++.+++++.+.++ .++++|++|+|+++++..++.+++++||+|+++.
T Consensus 25 ~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 97 (359)
T 1svv_A 25 GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNLIACSLALRPWEAVIATQ 97 (359)
T ss_dssp CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEET
T ss_pred CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcc
Confidence 688999999999875 354445667788888888877665 5678899999999999999999999999999999
Q ss_pred CCCcchHH--HhhccCCCceeeeeccCCCCCccCChhhHHHhhccC-------ceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 105 PGYPLYEI--HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN-------TVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 105 p~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
|+|+++.. .++ ..|.+++.++.+ ++.+|+++|+++++++ +++|++++| ||||.++|.+++++|.+
T Consensus 98 ~~~~~~~~~~~~~--~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~ 171 (359)
T 1svv_A 98 LGHISTHETGAIE--ATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISA 171 (359)
T ss_dssp TSHHHHSSTTHHH--HTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHH
T ss_pred cchHHHHHHHHHh--cCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHH
Confidence 99998876 367 789999998863 5689999999998766 889999999 79999999999999999
Q ss_pred HHHhcCcEEeecccccccccCCCCCccccccC-CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 176 TARNLGIIVIADEVYNHLAFGSTPYVPMGVFG-SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
+|+++|+++|+|++|.++.+...+. ....+. .....+++.|.+|. +.+ ..+|++++++ ++++.+....
T Consensus 172 ~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--------~~~~~~~~~~ 240 (359)
T 1svv_A 172 SCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--------ALKPNARHLI 240 (359)
T ss_dssp HHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--------GGCTTHHHHH
T ss_pred HHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--------cHHHHHHHHH
Confidence 9999999999999996543222111 111100 00112677889997 333 4578888864 4444444331
Q ss_pred ---hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcH
Q 038416 255 ---NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDD 331 (387)
Q Consensus 255 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 331 (387)
......+......+..+++. ..+++..+++.++++++.+.| +.+++.+. .|.+++++|+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~-~~~~~~~~~~~~~---------- 305 (359)
T 1svv_A 241 KQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIRLA-WPSASNQLFPILE---------- 305 (359)
T ss_dssp HHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCCBS-SCCSSSEECBEEE----------
T ss_pred hcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeEEc-cCCccceEEEEcC----------
Confidence 11111122223333444543 345778888899999999999 55688744 5777888887653
Q ss_pred HHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 332 LEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++...+++++||.+.+. .....+++|++++ .+++++++++++|+++++++
T Consensus 306 ~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 306 NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 356677755559988431 1123568999885 58999999999999887654
No 118
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=3.3e-30 Score=239.60 Aligned_cols=321 Identities=14% Similarity=0.134 Sum_probs=231.7
Q ss_pred CCCCCC-c---HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cC
Q 038416 21 VSLLSD-S---TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-AR 95 (387)
Q Consensus 21 ~~~~~~-~---~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~ 95 (387)
.|+|++ | +.+.+++.+.+..... .|.+..+..++|+.++++++ .+ +.|++++ |++|+..++.++ ++
T Consensus 6 ~p~f~~~p~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~------~~-~~i~~~s-Gt~al~~~l~~l~~~ 76 (388)
T 1b9h_A 6 APEFPAWPQYDDAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHG------AA-HALAVTN-GTHALELALQVMGVG 76 (388)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTT------CS-EEEEESC-HHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhC------CC-eEEEeCC-HHHHHHHHHHHcCCC
Confidence 347776 6 9999999999976433 45555678999999999984 22 4566665 489999999999 89
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
+||+|+++.|+|+++...+. ..|.+++.++++++ ++.+|+++|++++++++++|+ |+||||.+.+ +++|.+
T Consensus 77 ~gd~Vi~~~~~~~~~~~~~~--~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~ 147 (388)
T 1b9h_A 77 PGTEVIVPAFTFISSSQAAQ--RLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAK 147 (388)
T ss_dssp TTCEEEEESSSCTHHHHHHH--HTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHH
T ss_pred CcCEEEECCCccHHHHHHHH--HcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHH
Confidence 99999999999999999999 99999999998643 467899999999987777766 8999999976 788899
Q ss_pred HHHhcCcEEeecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH--HHHHHh
Q 038416 176 TARNLGIIVIADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF--VDSIKG 252 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~--~~~~~~ 252 (387)
+|+++|+++|+|++|+. ..+.+. ++..+. .+.+.||||.++++|.++||+++++. .+ ++.+..
T Consensus 148 la~~~~~~li~D~a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~-------~~~~~~~~~~ 213 (388)
T 1b9h_A 148 ISADTGVPLLQDAAHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDG-------ETEKYETAFL 213 (388)
T ss_dssp HHHHHTCCBCEECTTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTT-------CHHHHHHHHH
T ss_pred HHHHcCCEEEEecchhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCH-------HHHHHHHHHH
Confidence 99999999999999985 333322 122222 37788999777677789999998752 14 454433
Q ss_pred hhhc----------------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CC
Q 038416 253 CLNA----------------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK-----PQ 311 (387)
Q Consensus 253 ~~~~----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~ 311 (387)
.... +...+....+++...+ +++++..++++++++++.+.|+++|++..... +.
T Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 288 (388)
T 1b9h_A 214 RHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRN 288 (388)
T ss_dssp HTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBC
T ss_pred HHhCCCCccCccceeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCcc
Confidence 2210 1113333333332222 33566777888889999999998888774321 34
Q ss_pred ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC----------------------C-------CCeEEEEe
Q 038416 312 GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG----------------------M-------KNWLRIAF 362 (387)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------------~-------~~~~Ri~~ 362 (387)
+++++|+.++... ..+..++...| .++||.+.++.... . .+.+|+++
T Consensus 289 ~~~~~~~~~~~~~---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 364 (388)
T 1b9h_A 289 SHYMAMFRIPGLT---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHH 364 (388)
T ss_dssp CCSEEEEECTTCC---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEG
T ss_pred ceEEEEEEeCCcC---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecC
Confidence 5788898886310 00344566666 45799998764311 0 13599999
Q ss_pred e--C-ChHhHHHHHHHHHHHHHH
Q 038416 363 A--A-EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 363 ~--~-~~e~~~~~~~~l~~~~~~ 382 (387)
+ . ++++++.+++.|++++++
T Consensus 365 ~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 365 RVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhh
Confidence 4 5 889999999999988764
No 119
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.4e-31 Score=250.33 Aligned_cols=322 Identities=17% Similarity=0.230 Sum_probs=225.6
Q ss_pred CcHHHHHHHHHHhcCCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------C
Q 038416 26 DSTVAEDAVVDALRTAHY--NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------P 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~ 96 (387)
.+|.+.+++.+++..... ..|+. ....++++.+++++ ..+++++|+|+++|+..++.++.. +
T Consensus 56 ~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 126 (406)
T 4adb_A 56 AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGAEANEAALKLARKFAHDRYGS 126 (406)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 589999999999875311 12222 23455555555554 345999999999999999998864 6
Q ss_pred C-CeEEEcCCCCcchHHHhhccCCCceeee-eccCC-CCCcc----CChhhHHHhhccCceEEEEeCCCCCccccC--CH
Q 038416 97 G-ANILIPRPGYPLYEIHAAGSNNNLEARH-YDLLP-EKRWE----VDLDGVEALADENTVAIVIINPGNPCGNVF--SY 167 (387)
Q Consensus 97 g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~----~~~~~l~~~~~~~~~~v~l~~p~nptG~~~--~~ 167 (387)
| |.|+++.|+|+++...+. ..+..... ....+ ..+.. .|+++|++++++++++|+++ |+||+|.++ +.
T Consensus 127 g~~~vi~~~~~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~ 203 (406)
T 4adb_A 127 HKSGIVAFKNAFHGRTLFTV--SAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGGVVPASN 203 (406)
T ss_dssp TCCEEEEETTCCCCSSHHHH--HHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCH
T ss_pred CCcEEEEECCCcCCCcHHHh--hccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCH
Confidence 6 999999999998754444 33322110 00000 01111 37999999998888888887 999999987 99
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|.++|++||+++|+||+|+++.+.+.... +...+...+++ |+||.++ +|+|+||+++++ +++
T Consensus 204 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~d~~---t~sK~~~-~G~r~G~~~~~~--------~~~ 270 (406)
T 4adb_A 204 AFLQGLRELCNRHNALLIFDEVQTGVGRTGELYA-YMHYGVTPDLL---TTAKALG-GGFPVGALLATE--------ECA 270 (406)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSH-HHHHTCCCSEE---EECGGGG-TTSCCEEEEECH--------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCccchhHH-HHhcCCCCCEE---Eechhhc-CCCCeEEEEEcH--------HHH
Confidence 9999999999999999999999998776654332 22222222333 6799998 899999999875 677
Q ss_pred HHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCCCceEEEEEecCc
Q 038416 248 DSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----PCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~g~~~~~~~~~ 322 (387)
+.+.... ..+++++++.+.++..+++...+ ++..++++++++.+.+.|+++ +.+. . .+..|.++++.++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~ 345 (406)
T 4adb_A 271 RVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFS-E-VRGLGLLIGCVLNA 345 (406)
T ss_dssp HTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEE-E-EEEETTEEEEEECT
T ss_pred hhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCce-E-EEEEEEEEEEEEeC
Confidence 7776543 24567888889888888775322 455666777777777777654 1111 1 22346678887764
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
... .+..++...+. ++||.+.++. .+++|+++ ..+++++++++++|+++++++++
T Consensus 346 ~~~---~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 346 DYA---GQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp TTT---TCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CcH---HHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 210 13556777665 5599999864 68999965 56899999999999999988764
No 120
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3.2e-31 Score=245.22 Aligned_cols=324 Identities=15% Similarity=0.155 Sum_probs=230.1
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCC--CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTA--HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
.+++.+.|.+. ..++ +++.+.+++.+.+... ....|+. .+..++++.+++++ ++ ++++++|+|++++
T Consensus 29 ~~ld~~~~~~~--~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~-~~~v~~~~g~t~a 98 (375)
T 2eh6_A 29 EYLDFVSGIGV--NSLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF------WT-EGKVFFANSGTES 98 (375)
T ss_dssp EEEESSHHHHT--CTTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS------SS-CEEEEEESSHHHH
T ss_pred EEEEcCCcccc--cccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc------CC-CCeEEEeCchHHH
Confidence 34455444321 1355 7899999999988642 1224643 45678888888876 33 3899999999999
Q ss_pred HHHHHHh---hc---CCC-CeEEEcCCCCcchHHHhhccCCCceee----eeccCCCCCcc----CChhhHHHhhccCce
Q 038416 86 IEISLSV---LA---RPG-ANILIPRPGYPLYEIHAAGSNNNLEAR----HYDLLPEKRWE----VDLDGVEALADENTV 150 (387)
Q Consensus 86 ~~~~~~~---l~---~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~----~~~~~l~~~~~~~~~ 150 (387)
+..++.+ +. ++| |+|++++|+|+.+...+. ..+.... ..++. .+.. .|+++|+++++++++
T Consensus 99 ~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~ 174 (375)
T 2eh6_A 99 VEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSL--SATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDEETA 174 (375)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHH--HHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCTTEE
T ss_pred HHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhh--hhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcCCeE
Confidence 9999975 34 678 999999999988765544 3222211 01111 0111 489999999988899
Q ss_pred EEEEeCCCCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce
Q 038416 151 AIVIINPGNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL 229 (387)
Q Consensus 151 ~v~l~~p~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~ 229 (387)
+|++++++||||.+ .+.+++++|.++|+++|+++|+|++|+++...+... ++..+....+++ |+||.++ +|+|+
T Consensus 175 ~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~-~g~~~ 249 (375)
T 2eh6_A 175 GIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG-GGVPI 249 (375)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG-TTSCC
T ss_pred EEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc-CCCCe
Confidence 99999999999998 568889999999999999999999999865443222 233333112222 7889987 68999
Q ss_pred EEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPV 308 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 308 (387)
||+++++ ++++.+.... ..+.+.+++.+.++.++|+.. .+..++++++++.+.+.|++++. . .
T Consensus 250 G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~-~-~- 313 (375)
T 2eh6_A 250 GAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELGK-G-K- 313 (375)
T ss_dssp EEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTS-S-E-
T ss_pred EEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhc-C-C-
Confidence 9999976 5666555421 234456777888777777642 16677888888999999988743 2 2
Q ss_pred CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHH
Q 038416 309 KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAF 379 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~ 379 (387)
.+..|+++|+.++. +..++...+. ++||.+.++. .+++|++++ .+++++++++++|+++
T Consensus 314 ~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 314 VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 34567888988863 3456767664 5799998863 689999984 5899999999999875
No 121
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.98 E-value=7.4e-31 Score=245.47 Aligned_cols=334 Identities=15% Similarity=0.071 Sum_probs=233.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCC---CcHH--HHH-----HHHHHHhhcCCCCCCCCCEEE
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTL---GVPS--ARR-----GIADYLNRDLPYKLSPEDVYL 78 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~~~--lr~-----~ia~~~~~~~~~~~~~~~i~~ 78 (387)
.+++.+.|.+ +.++.+.+++.+.+.+....+|+... |.+. +++ .+++++ +.+++++++
T Consensus 24 ~~i~~~~~~~------~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~------g~~~~~i~~ 91 (407)
T 2dkj_A 24 EGLELIASEN------FVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF------GAAWANVQP 91 (407)
T ss_dssp TSEECCTTCC------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEECCC
T ss_pred cceeeccCCC------CCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh------CCCcceEEe
Confidence 4455555544 23899999999988642233454321 3332 333 555555 234444555
Q ss_pred cCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH---HHhhccCCCceeeeeccCC-CCCccCChhhHHHhhcc-CceEEE
Q 038416 79 TLGCSQAIEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEARHYDLLP-EKRWEVDLDGVEALADE-NTVAIV 153 (387)
Q Consensus 79 ~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~---~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~ 153 (387)
++| ++++..++.+++++||+|+++.|+|+++. ..+. ..|.++..+++.. .+++.+|++++++++++ ++++|+
T Consensus 92 ~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 168 (407)
T 2dkj_A 92 HSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVN--FSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIV 168 (407)
T ss_dssp SSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTS--HHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred cch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHH--hcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEE
Confidence 655 56999999999999999999999998873 3444 4555444444421 23567899999999874 789999
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
+++|+|| ...+ +++|.++|+++|+++|+|++|+. +.+.+.....+ . ...+++.|+||+ ++|.|+||+
T Consensus 169 ~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~ 236 (407)
T 2dkj_A 169 AGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLI 236 (407)
T ss_dssp ECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEE
T ss_pred EeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEE
Confidence 8899997 4555 89999999999999999999997 54444322211 1 135889999996 558889999
Q ss_pred EeeCCCCcccchhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
++++ +++++.+..... ..++++.....++..+++...+.++++..++++++++++.+.|+++ ++.++..+
T Consensus 237 ~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 308 (407)
T 2dkj_A 237 LSND-------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGG 308 (407)
T ss_dssp EESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred EECC-------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCC
Confidence 9972 267777766542 2234444444455566664334667888999999999999999988 77744224
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc------CCCCeEEEEee------CChHhHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV------GMKNWLRIAFA------AEPATLEDGLERIKA 378 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~~Ri~~~------~~~e~~~~~~~~l~~ 378 (387)
..++++|+.++... .+..++...+ .++||.+.+|..+ ..++++|++++ .+++++++++++|++
T Consensus 309 ~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 309 TDNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp CSSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred CCceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 57888898886421 1345565555 6789999998753 23578999994 689999999999999
Q ss_pred HHHH
Q 038416 379 FCQR 382 (387)
Q Consensus 379 ~~~~ 382 (387)
++++
T Consensus 384 ~~~~ 387 (407)
T 2dkj_A 384 ALLE 387 (407)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9877
No 122
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.98 E-value=1.6e-31 Score=249.24 Aligned_cols=314 Identities=11% Similarity=0.130 Sum_probs=221.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC------C-CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR------P-GA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~------~-g~ 98 (387)
.++.+.+++.+++..... ++.. ...++++.+++.+.+.++ .+++++++|+++|+..++.++.. + ++
T Consensus 57 ~~~~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~ 129 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIH--CSNL-FWNRPQMELAELLSKNTF----GGKVFFANTGTEANEAAIKIARKYGKKKSEKKY 129 (397)
T ss_dssp TCHHHHHHHHHHHHHCSC--CCTT-SEEHHHHHHHHHHHHTTT----SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCHHHHHHHHHHHHhccc--Cccc-cCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCc
Confidence 689999999998875311 1110 112344444444444333 57999999999999999998863 5 47
Q ss_pred eEEEcCCCCcchHH-HhhccCCCce------------eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc-c
Q 038416 99 NILIPRPGYPLYEI-HAAGSNNNLE------------ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN-V 164 (387)
Q Consensus 99 ~vl~~~p~~~~~~~-~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~-~ 164 (387)
.|++++|+|++... .+. ..|.+ +..++. .|+++|++++++++++|++++|+||||. .
T Consensus 130 ~vi~~~~~yh~~~~~~~~--~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~~~~nptG~~~ 200 (397)
T 2ord_A 130 RILSAHNSFHGRTLGSLT--ATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSEDVCAVFLEPIQGESGIVP 200 (397)
T ss_dssp EEEEEBTCCCCSSHHHHH--HSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTTEEEEEECSEECTTTCEE
T ss_pred eEEEEcCCcCCCchhhhh--ccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcCeEEEEEecccCCCCccc
Confidence 89999999976443 555 55654 444432 2799999999888999999999999999 8
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
++.+++++|+++|+++|+++|+||+|+++.+.+.. .++..++...++ .|+||.++ +|+|+||+++++
T Consensus 201 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~---~s~sK~~~-~G~r~G~~~~~~-------- 267 (397)
T 2ord_A 201 ATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDV---LTTAKGLG-GGVPIGAVIVNE-------- 267 (397)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSE---EEECGGGG-TTSCCEEEEECS--------
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCe---eeeccccC-CCcCeEEEEEch--------
Confidence 99999999999999999999999999987665542 222222211122 27899987 899999999976
Q ss_pred hHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCC-CCCCceEEEEEecC
Q 038416 245 GFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP-CITCP-VKPQGAMFVMVKLN 321 (387)
Q Consensus 245 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~-~~~~~g~~~~~~~~ 321 (387)
+++ .+... ...+++++++.+.++.++|+...+ ++..++++++++++.+.|++++ ++..+ ..+..|.++++.++
T Consensus 268 ~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 343 (397)
T 2ord_A 268 RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR 343 (397)
T ss_dssp TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC
Confidence 333 34322 123456788888888888765332 3456777777888887777642 22211 02334667788775
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
.. .+..++...+++ +||.+.||. ++++|+++ ..+++++++++++|++++++
T Consensus 344 ~~-----~~~~~l~~~l~~-~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 344 EE-----VSNREVATKCFE-NKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TT-----SCHHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred Ch-----HHHHHHHHHHHH-CCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 31 135667777654 799999873 67999997 46899999999999988764
No 123
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.98 E-value=5.7e-31 Score=240.99 Aligned_cols=314 Identities=15% Similarity=0.142 Sum_probs=216.0
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
.+++.+++++.+..... ..|.+..+..+||+.++++++ .+++++++|+++++..++.+++++||+|+++.
T Consensus 15 ~p~~~~~~a~~~~~~~~--~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~ 84 (347)
T 1jg8_A 15 KPTEEMRKAMAQAEVGD--DVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVSIMAHTQRGDEVILEA 84 (347)
T ss_dssp CCCHHHHHHHHTCCCCC--GGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEET
T ss_pred CCCHHHHHHHhcCCCCC--cccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHHHHHHHhcCCCCEEEEcC
Confidence 46688888887654322 246555678899999999983 24678888889999999999999999999999
Q ss_pred CCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCc-cccCCHHHHHHHH
Q 038416 105 PGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPC-GNVFSYQHLQKIA 174 (387)
Q Consensus 105 p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~npt-G~~~~~~~~~~l~ 174 (387)
|+|..... .+. ..|.+++.+ .. .++.+|++++++++++ ++++|++++|+||| |.++|.+++++|+
T Consensus 85 ~~~~~~~~~~~~~~--~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~ 159 (347)
T 1jg8_A 85 DSHIFWYEVGAMAV--LSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEIC 159 (347)
T ss_dssp TCHHHHSSTTHHHH--HTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHH
T ss_pred cchhhhccccchhh--ccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHH
Confidence 99975332 456 678888877 32 2345799999999875 58999999999999 9999999999999
Q ss_pred HHHHhcCcEEeeccccccc--ccCCCCCccccccCCCccEEEEecCcccccccccceEE-EEeeCCCCcccchhHHHHHH
Q 038416 175 RTARNLGIIVIADEVYNHL--AFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGW-LVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~-i~~~~~~~~~~~~~~~~~~~ 251 (387)
++|+++|+++|+|++|... .+.+....++.. .. + .++.|+||+++++ +|+ ++.++ ++++++.
T Consensus 160 ~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~-d--~~~~s~sK~l~~~---~G~~~~~~~--------~~~~~~~ 224 (347)
T 1jg8_A 160 TIAKEHGINVHIDGARIFNASIASGVPVKEYAG-YA-D--SVMFCLSKGLCAP---VGSVVVGDR--------DFIERAR 224 (347)
T ss_dssp HHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH-TC-S--EEEEESSSTTCCS---SCEEEEECH--------HHHHHHH
T ss_pred HHHHHCCCEEEeehhhhhcchhhcCCChHHhcc-cc-c--EEEEecccccCCC---ceEEEEcCH--------HHHHHHH
Confidence 9999999999999987531 112222221111 11 1 3345899997643 575 44443 5777665
Q ss_pred hhhh-ccC--CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCC
Q 038416 252 GCLN-AAS--HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDI 328 (387)
Q Consensus 252 ~~~~-~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (387)
..+. ... ..+...+.+....++...+ .+ ++..++++.+.+.|+++ ++.+...+..++++|++++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~----~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~---- 294 (347)
T 1jg8_A 225 KARKMLGGGMRQAGVLAAAGIIALTKMVD-RL----KEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLK---- 294 (347)
T ss_dssp HHHHHHTCCCSSTHHHHHHHHHHHHHSST-TH----HHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSS----
T ss_pred HHHHHcCCchhHHHHHHHHHHHHHHHHHH-HH----HHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccccc----
Confidence 5432 222 2233344444444443211 12 22334567777888777 6653223445667888876311
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+..++...+. ++||.+.++. .+++|++++ .+++++++++++|+++++++
T Consensus 295 ~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 295 VNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 14567777774 5699998753 578999985 48999999999999988653
No 124
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=2.6e-30 Score=243.48 Aligned_cols=339 Identities=15% Similarity=0.105 Sum_probs=225.7
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCC---CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHY---NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
.+.+.+.+.+..+.++ .+|.+.+++.+++..... ..|+. ....++++.+++++ +.++++|++|+|+++|
T Consensus 44 ~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~ggtea 115 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSGSVA 115 (429)
T ss_dssp EEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSHHHH
T ss_pred EEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCHHHH
Confidence 3445544433222232 589999999999875321 12322 22355666666665 3577899999999999
Q ss_pred HHHHHHhhc---C----CCCeEEEcCCCCcchHHHhhccCCC-------------ceeeeeccCC---CCCc-cCChhhH
Q 038416 86 IEISLSVLA---R----PGANILIPRPGYPLYEIHAAGSNNN-------------LEARHYDLLP---EKRW-EVDLDGV 141 (387)
Q Consensus 86 ~~~~~~~l~---~----~g~~vl~~~p~~~~~~~~~~~~~~g-------------~~~~~~~~~~---~~~~-~~~~~~l 141 (387)
+..+++++. + +|++|+++.|+|+++..... +..+ .++..++.+. +..+ ..|+++|
T Consensus 116 ~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 194 (429)
T 1s0a_A 116 VEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAM-SVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGF 194 (429)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHH-TTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHH
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhh-hhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHH
Confidence 999998753 2 58999999999987644332 0111 1234444421 1123 4789999
Q ss_pred HHhhcc--CceEEEEeCC--CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEe
Q 038416 142 EALADE--NTVAIVIINP--GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLG 216 (387)
Q Consensus 142 ~~~~~~--~~~~v~l~~p--~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 216 (387)
++++++ ....+++++| +||||. .++.+++++|.++|++||+++|+||+|+++...+... .+.......+ +.
T Consensus 195 ~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d---~~ 270 (429)
T 1s0a_A 195 ARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPD---IL 270 (429)
T ss_dssp HHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EE
T ss_pred HHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCC---EE
Confidence 998863 2334455666 589996 5678889999999999999999999999876544321 2221221122 23
Q ss_pred cCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHH
Q 038416 217 SISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKE 289 (387)
Q Consensus 217 s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 289 (387)
|+||.++ +| +|+||+++++ ++++.+... ...+++++++++.++.++++...+ .+..+++++
T Consensus 271 t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~ 338 (429)
T 1s0a_A 271 CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVAD 338 (429)
T ss_dssp EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHH
T ss_pred Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHH
Confidence 7899976 58 9999999875 677777653 123456788888888888764222 234566677
Q ss_pred HHHHHHHHhhcC---CCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eC
Q 038416 290 TADICYERIKEI---PCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AA 364 (387)
Q Consensus 290 ~~~~~~~~l~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~ 364 (387)
+++++.+.|+++ |++. . .+..|.++|+.++.. .+..++...++ ++||.+.+. .+++||++ ..
T Consensus 339 ~~~~l~~~L~~l~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~~~ 405 (429)
T 1s0a_A 339 IEVQLREQLAPARDAEMVA-D-VRVLGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYII 405 (429)
T ss_dssp HHHHHHHHHGGGGGCTTEE-E-EEEETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCCEE-E-EEEeeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCCCC
Confidence 788888888765 4443 1 223456788887531 14556766665 679999874 37899997 46
Q ss_pred ChHhHHHHHHHHHHHHHHhhh
Q 038416 365 EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 365 ~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+++++++++++|++++++++.
T Consensus 406 t~e~i~~~~~~l~~~~~~~~~ 426 (429)
T 1s0a_A 406 LPQQLQRLTAAVNRAVQDETF 426 (429)
T ss_dssp CHHHHHHHHHHHHHHTSSGGG
T ss_pred CHHHHHHHHHHHHHHHHhhhc
Confidence 899999999999998876553
No 125
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=6.2e-30 Score=238.43 Aligned_cols=313 Identities=16% Similarity=0.136 Sum_probs=216.6
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhc---C-CCCCCCC--CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 12 SPWPRRPLGVSLLSDSTVAEDAVVDALR---T-AHYNCYS--PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~--~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
..|.+.| +++.++.+.+++.++.. + .....|+ ......++++.++++++ . ++.+++++++++
T Consensus 24 ~~~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a 91 (398)
T 2rfv_A 24 TGALSTP----IFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------G--EAGLATASGISA 91 (398)
T ss_dssp TCCSSCC----CCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHH
T ss_pred CCCcCCC----CcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------C--CcEEEECCHHHH
Confidence 4556555 77777777666666554 1 1122333 23456778888888772 2 256666667799
Q ss_pred HHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 86 IEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 86 ~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+..++.+++++||+|+++.|+|+++...+ . ..|.++..++.. |++++++++++++++|++++|+|||
T Consensus 92 ~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~npt 162 (398)
T 2rfv_A 92 ITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMP--KFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPT 162 (398)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHH--HTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTT
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHH--HcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCC
Confidence 99999999999999999999999887765 6 789998888752 7899999998899999999999999
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCc
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGI 240 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~ 240 (387)
|.+++ +++|.++|+++|+++|+|++|+.+.+.. ++ .+ +..+++.|+||+++.+|.|+ ||+++++
T Consensus 163 G~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~---- 227 (398)
T 2rfv_A 163 LSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ---- 227 (398)
T ss_dssp TBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH----
T ss_pred CcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH----
Confidence 99997 8999999999999999999999755421 22 22 24588999999999999998 9999875
Q ss_pred ccchhHHH-HHHhhhh-c-cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC--------------C
Q 038416 241 LQNSGFVD-SIKGCLN-A-ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP--------------C 303 (387)
Q Consensus 241 ~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~ 303 (387)
++++ .++.... . +.+.+++.++++...++. +..+.++..++++.+.+.|++.+ +
T Consensus 228 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~ 298 (398)
T 2rfv_A 228 ----EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQ 298 (398)
T ss_dssp ----HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTT
T ss_pred ----HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 5665 4554433 3 457788888888887764 23334445556666666666532 2
Q ss_pred CCCCCCC---CceEEEEEecCcccccCCCcHHHHHHHHHHh---cCeEEEcCCccC----------------------C-
Q 038416 304 ITCPVKP---QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKE---ESVIILPGRTVG----------------------M- 354 (387)
Q Consensus 304 ~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gi~v~~g~~~~----------------------~- 354 (387)
+.+. .| ..+.++++.++. .......++++ .|+.+.+|..+. .
T Consensus 299 ~~~~-~~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~ 369 (398)
T 2rfv_A 299 YELG-QRQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGIT 369 (398)
T ss_dssp HHHH-HHHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCC
T ss_pred HHHH-HhhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCC
Confidence 2211 11 235566667752 11222333333 377777775431 1
Q ss_pred CCeEEEEeeC--ChHhHHHHHHHHHH
Q 038416 355 KNWLRIAFAA--EPATLEDGLERIKA 378 (387)
Q Consensus 355 ~~~~Ri~~~~--~~e~~~~~~~~l~~ 378 (387)
++.+|+|++. ++++++++.+.|++
T Consensus 370 ~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 370 DGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 5799999975 45666666666544
No 126
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=1.2e-30 Score=245.71 Aligned_cols=337 Identities=14% Similarity=0.089 Sum_probs=212.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+++.+++... .+|....+..++++++++++.+.++ .+.++|++|+|+++++..+++.+++ ++
T Consensus 46 ~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~ 121 (430)
T 3i4j_A 46 GRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEATESAVKLARQYHVERGEPGR 121 (430)
T ss_dssp CCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3899999999988753 2333334455667777777766554 4567999999999999999998863 46
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc---------------eeeeeccCCCC-CccCChhhHHHhhcc---CceEEEEeCC-
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL---------------EARHYDLLPEK-RWEVDLDGVEALADE---NTVAIVIINP- 157 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~---------------~~~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~v~l~~p- 157 (387)
+.|++.+|+|+++...+. ..+. ++..++.+... ....|+++|+++++. ++.++++++|
T Consensus 122 ~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~ 199 (430)
T 3i4j_A 122 FKVITRVPSYHGASLGSL--AASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPV 199 (430)
T ss_dssp CEEEEETTC---------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSS
T ss_pred cEEEEEeCCcCCCCcccc--cccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 899999999998765544 3332 22223221100 012356888888862 4455566666
Q ss_pred CC-Cccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccccc-CCCccEEEEecCcccccccc-cceEEEE
Q 038416 158 GN-PCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF-GSIVPVITLGSISKRWIVPG-WRLGWLV 233 (387)
Q Consensus 158 ~n-ptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~s~sK~~~~~g-~r~G~i~ 233 (387)
+| ++|. .++.+++++|.++|++||+++|+||+|.++.+.+... .+..+ ....+ +.++||+++ +| +|+||++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~~~~~~~~~~d---i~t~sK~l~-~G~~r~G~~~ 274 (430)
T 3i4j_A 200 VGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-ALSRWSGVTPD---IAVLGKGLA-AGYAPLAGLL 274 (430)
T ss_dssp CCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTTCCCS---EEEECGGGT-TTSSCCEEEE
T ss_pred ccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhhhhcCCCCc---EEEEccccc-CCccccEEEE
Confidence 66 8887 5678889999999999999999999999887665422 22222 21112 336899987 49 9999999
Q ss_pred eeCCCCcccchhHHHHHHhh-----hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 234 TSDPNGILQNSGFVDSIKGC-----LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
+++ ++++.+... ...+++.+++++.++.++|+...+ ...++..+.....++.+.+.++.+|.+..+
T Consensus 275 ~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 275 AAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp ECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred ECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 976 788888763 234567889999998888875332 233444444444555555555456655522
Q ss_pred CCCCceEEEEEecCcccccC----CCcHHHHHHHHHHhcCeEEEcCCccC---CCCeEEEEee--CChHhHHHHHHHHHH
Q 038416 308 VKPQGAMFVMVKLNVSMLED----IGDDLEFCLKLAKEESVIILPGRTVG---MKNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+..|.|+++.+....... .....++...+ .++||.+.|+..+. .++++||+++ .+++++++++++|++
T Consensus 347 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 423 (430)
T 3i4j_A 347 --RGTGLLLGVVLGDLATGQAFETPGIASRIGAAA-LKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAG 423 (430)
T ss_dssp --EEETTEEEEEEC------------CHHHHHHHH-HHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred --EEEEEEEEEEeccccccCCCccHHHHHHHHHHH-HhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 334667777764210000 00124566665 46799999873221 1578999996 689999999999999
Q ss_pred HHHHhh
Q 038416 379 FCQRHA 384 (387)
Q Consensus 379 ~~~~~~ 384 (387)
+++++.
T Consensus 424 ~l~~~~ 429 (430)
T 3i4j_A 424 ALEDVL 429 (430)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 998754
No 127
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=9.2e-31 Score=242.94 Aligned_cols=320 Identities=14% Similarity=0.107 Sum_probs=230.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---CCCC
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA---RPGA 98 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~g~ 98 (387)
.++++.+.+++.+.... ++.+. ....++++.++++++... ++++++|++|+|+++++..++.++. ++||
T Consensus 14 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd 87 (385)
T 2bkw_A 14 IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLGWDIFASNFILSKAPNK 87 (385)
T ss_dssp CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHHHHHHHHHHSCTTCSCC
T ss_pred cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHHHHHHHHHHhccCCCCC
Confidence 46778888877665432 22221 135677888888886532 2456899999999999999999997 8999
Q ss_pred eEEEcC-CCCcch-HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 99 NILIPR-PGYPLY-EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 99 ~vl~~~-p~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
+|+++. +.|+.+ ...+. ..|.+++.+++. ..++.+|+++|++++++ ++++|++++|+||||.+++ +++|.+
T Consensus 88 ~vlv~~~~~~~~~~~~~~~--~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~ 161 (385)
T 2bkw_A 88 NVLVVSTGTFSDRFADCLR--SYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQ 161 (385)
T ss_dssp EEEEECSSHHHHHHHHHHH--HTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHH
T ss_pred eEEEEcCCcchHHHHHHHH--HcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC---HHHHHH
Confidence 998874 455544 35667 789999998872 23456899999999977 7899999999999999988 778999
Q ss_pred HHHhc--CcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHH-HHH
Q 038416 176 TARNL--GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVD-SIK 251 (387)
Q Consensus 176 ~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~-~~~ 251 (387)
+|+++ |+++|+|++|+... ...++..+ +..+++.|+||+++ ++| +||+++++ +.++ .++
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~--------~~~~~~l~ 224 (385)
T 2bkw_A 162 AIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS--------RFMDYALN 224 (385)
T ss_dssp HHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH--------HHHHHHTC
T ss_pred HHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH--------HHHHHHHh
Confidence 99999 99999999998421 11123222 23478899999654 566 59999875 4444 321
Q ss_pred ----------------------hhhh----ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh-hcCCCC
Q 038416 252 ----------------------GCLN----AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERI-KEIPCI 304 (387)
Q Consensus 252 ----------------------~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~ 304 (387)
.... ..++++...+.++..+++...+..+++..++++++++++.+.| +++ ++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~ 303 (385)
T 2bkw_A 225 DSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QL 303 (385)
T ss_dssp HHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC
T ss_pred hccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 1111 0135666777777777765333347778888999999999999 888 77
Q ss_pred CCCCCC-----CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-CCCeEEEE-ee-----CChHhHHHH
Q 038416 305 TCPVKP-----QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-MKNWLRIA-FA-----AEPATLEDG 372 (387)
Q Consensus 305 ~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~Ri~-~~-----~~~e~~~~~ 372 (387)
.++ .+ ..++++++.++ +..++...+ .++||.+.+|..+. ..+++||+ ++ .++++++++
T Consensus 304 ~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~ 373 (385)
T 2bkw_A 304 TSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNC 373 (385)
T ss_dssp EES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHH
T ss_pred eec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHH
Confidence 644 32 24677888775 245666666 56799999987643 25789999 65 488999999
Q ss_pred HHHHHHHHHHh
Q 038416 373 LERIKAFCQRH 383 (387)
Q Consensus 373 ~~~l~~~~~~~ 383 (387)
+++|+++++++
T Consensus 374 ~~~l~~~~~~~ 384 (385)
T 2bkw_A 374 FDLIKLALQRK 384 (385)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHHhc
Confidence 99999887543
No 128
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=2.4e-30 Score=240.89 Aligned_cols=308 Identities=16% Similarity=0.148 Sum_probs=223.5
Q ss_pred CcHHHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC--------
Q 038416 26 DSTVAEDAVVDALRTAHY-NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP-------- 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-------- 96 (387)
.+|.+.+++.+.+..... ..+.......++++.+++++ ..+++++++|+++|+..++..+..+
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~ 124 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVE 124 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCC
Confidence 589999999998875321 11112345677888888877 3679999999999999999987643
Q ss_pred --CCeEEEcCCCCcchHHHhhccCCCce-------------eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 97 --GANILIPRPGYPLYEIHAAGSNNNLE-------------ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 97 --g~~vl~~~p~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+|+|+++.|+|+++...+. ..+.. +..++. .|+++|++++++++++|++++|+|||
T Consensus 125 ~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~~~~npt 195 (392)
T 3ruy_A 125 ANRAEIIVCEDNFHGRTMGAV--SMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPNTAAFILEPIQGEA 195 (392)
T ss_dssp TTCCEEEEETTCCCCSSHHHH--HTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTTEEEEEECSSBSTT
T ss_pred CCCcEEEEEcCCcCCCCHhhh--hccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccCeEEEEEeCccCCC
Confidence 6799999999987654443 22211 222221 27999999999899999999999999
Q ss_pred cccCCHHH-HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCC
Q 038416 162 GNVFSYQH-LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNG 239 (387)
Q Consensus 162 G~~~~~~~-~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~ 239 (387)
|.+++.++ +++|.++|++||+++|+||+|+++.+.+.... ........++ .++||.++ +| +|+||+++++
T Consensus 196 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~d~---~~~SK~l~-gG~~~~G~~~~~~--- 267 (392)
T 3ruy_A 196 GINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFA-CDWDNVTPDM---YILGKALG-GGVFPISCAAANR--- 267 (392)
T ss_dssp TSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSE---EEECGGGG-TTTSCCEEEEECH---
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchh-hhccCCCCCE---EEEchhhh-CChhhhEEEEECH---
Confidence 99996555 99999999999999999999998776654332 2222221222 36789843 36 9999999975
Q ss_pred cccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCCCCceEEE
Q 038416 240 ILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI--PCITCPVKPQGAMFV 316 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~g~~~ 316 (387)
++++.+..... .+++++++.+.++..+++...+ ++..++++++++++.+.|+++ +.+. . .+..|.++
T Consensus 268 -----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~-~-~~~~g~~~ 337 (392)
T 3ruy_A 268 -----DILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMIT-E-VRGKGLFI 337 (392)
T ss_dssp -----HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEE-E-EEEETTEE
T ss_pred -----HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCce-E-EEeeeeEE
Confidence 66666655432 4567888899998888875322 567788888999999999886 2233 2 22335566
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFC 380 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~ 380 (387)
++.++. +..++...+ .++||.+.||. .+++|+++ ..+++++++++++|++++
T Consensus 338 ~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 338 GIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 666653 345676766 46799999875 68999996 468999999999998875
No 129
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=5.7e-30 Score=240.27 Aligned_cols=321 Identities=13% Similarity=0.134 Sum_probs=214.2
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-CCCeEEEcCC
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-PGANILIPRP 105 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~g~~vl~~~p 105 (387)
+|.+.+++.+++.... .|+...+..+++..+++.+.+.++... +++|++|+|+++++..+++.+.. +|++|++++|
T Consensus 61 ~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p 137 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLG 137 (419)
T ss_dssp CHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETT
T ss_pred CHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECC
Confidence 7999999999987532 222111222334444444444444222 68999999999999999987653 4899999999
Q ss_pred CCcchHHHhh-cc------C-----CCceeeeeccCCCC--Ccc------------CChhhHH-Hhhcc----CceEEEE
Q 038416 106 GYPLYEIHAA-GS------N-----NNLEARHYDLLPEK--RWE------------VDLDGVE-ALADE----NTVAIVI 154 (387)
Q Consensus 106 ~~~~~~~~~~-~~------~-----~g~~~~~~~~~~~~--~~~------------~~~~~l~-~~~~~----~~~~v~l 154 (387)
+|+++..... .. . ...++..++.+... +++ +|+++|+ +++++ ....+++
T Consensus 138 ~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi 217 (419)
T 2eo5_A 138 GFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIF 217 (419)
T ss_dssp CCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEE
T ss_pred CcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEE
Confidence 9986443221 00 0 11245566653211 112 3678998 88763 2345666
Q ss_pred eCCC-CCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEE
Q 038416 155 INPG-NPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGW 231 (387)
Q Consensus 155 ~~p~-nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~ 231 (387)
++|+ ||||. .++.+++++|.++|++||+++|+||+|.++.+.+... .+.......+ +.|+||.++. | +|+||
T Consensus 218 ~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d---~~t~sK~~~~-G~~riG~ 292 (419)
T 2eo5_A 218 FEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPD---VITLAKALGG-GIMPIGA 292 (419)
T ss_dssp ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGGT-TTSCCEE
T ss_pred EeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCC---EEEecccccC-CccceEE
Confidence 7775 57896 6688889999999999999999999999876655321 1222222222 2379999874 9 99999
Q ss_pred EEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ 311 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 311 (387)
+++++ +++ .+......+++.+++++.++.++++.. .+..++++++++++.+.|+++ +. . .+.
T Consensus 293 ~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~--~~-~-~~~ 354 (419)
T 2eo5_A 293 TIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL--AD-D-VRG 354 (419)
T ss_dssp EEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS--SS-E-EEE
T ss_pred EEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh--hh-h-eEe
Confidence 99976 444 441122345677889999988888752 226788888899999998876 33 2 234
Q ss_pred ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 312 GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.|+|+++.+.... .... +...++ ++||.+.|+. .+++||++ ..+++++++++++|+++++++
T Consensus 355 ~g~~~~i~~~~~~----~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 355 IGLAWGLEYNEKK----VRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ETTEEEEECSCHH----HHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred eeEEEEEEEecCc----cHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5778888873110 0233 556654 6799999864 57999987 468999999999999988764
No 130
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=1.9e-31 Score=248.98 Aligned_cols=326 Identities=15% Similarity=0.082 Sum_probs=213.5
Q ss_pred CCcHHHHHHHHHHhcCCCCC---CCCC----CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---
Q 038416 25 SDSTVAEDAVVDALRTAHYN---CYSP----TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~---~y~~----~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--- 94 (387)
++++.+.+++.+.+.....+ .|.. .....++++.+++++ ++++++|++|+|+++++..++.+++
T Consensus 31 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~~g~t~al~~~~~~l~~~~ 104 (400)
T 3vax_A 31 RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFTSGATESNNIALLGLAPYG 104 (400)
T ss_dssp SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEESCHHHHHHHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEeCCHHHHHHHHHHHHHHhh
Confidence 67899999999988632100 1111 112456666677666 3567899999999999999999998
Q ss_pred -CCCC-eEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 95 -RPGA-NILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 95 -~~g~-~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
++|| .|+++.++|+++..... ....|.++..++++. ++.+|+++|+++++++++++++++|+||||.+++ ++
T Consensus 105 ~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~ 179 (400)
T 3vax_A 105 ERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VA 179 (400)
T ss_dssp HHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred ccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HH
Confidence 8999 99999999988654444 114699999998753 5578999999999989999999999999999988 78
Q ss_pred HHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEE-eeCCCCcccchhHHHHH
Q 038416 172 KIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLV-TSDPNGILQNSGFVDSI 250 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~-~~~~~~~~~~~~~~~~~ 250 (387)
+|.++|+++|+++|+|++|+... ....+..+ ..+++.|++|.++.+| +|+++ +++.........+...+
T Consensus 180 ~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 249 (400)
T 3vax_A 180 ELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIM 249 (400)
T ss_dssp HHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSS
T ss_pred HHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCcee
Confidence 89999999999999999998421 11222222 2388999999866555 67777 76521100000010000
Q ss_pred H----hhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEEecCcc
Q 038416 251 K----GCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG---AMFVMVKLNVS 323 (387)
Q Consensus 251 ~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---g~~~~~~~~~~ 323 (387)
. .......+++...+.++..+++.. ..++++..++++++++++.+.|+ .+++.+. .+.. +.++++.++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~-~~~~~~~~~~~~~~~~~- 325 (400)
T 3vax_A 250 FGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN-GDQDHVVPHILNLSFED- 325 (400)
T ss_dssp CSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC-SCTTSBCTTEEEEECTT-
T ss_pred cCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe-CCcccCCCCEEEEEeCC-
Confidence 0 001123455666777666666532 34578888999999999999998 7788744 4433 3455655542
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCccCC-------------------CCeEEEEe-e--CChHhHHHHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRTVGM-------------------KNWLRIAF-A--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++...+ . +||.+.+|..|.. .+++||++ + .+++++++++++|+++++
T Consensus 326 -----~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 326 -----VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp -----CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred -----CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 1456676666 4 7999998865432 38999999 6 478999999999988876
Q ss_pred H
Q 038416 382 R 382 (387)
Q Consensus 382 ~ 382 (387)
+
T Consensus 399 ~ 399 (400)
T 3vax_A 399 S 399 (400)
T ss_dssp -
T ss_pred c
Confidence 4
No 131
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=3e-30 Score=240.42 Aligned_cols=318 Identities=16% Similarity=0.146 Sum_probs=220.9
Q ss_pred CcHHHHHHHHHHhcCCCC--CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEE
Q 038416 26 DSTVAEDAVVDALRTAHY--NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl 101 (387)
.++.+.+++.+++..... ..| ......++++.+++++ + +++++|++++|+++|+..+++++. .+|+.|+
T Consensus 62 ~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi 134 (395)
T 1vef_A 62 GNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSGTEANEAALKFARAHTGRKKFV 134 (395)
T ss_dssp TCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEE
T ss_pred CCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEE
Confidence 889999999999875311 112 1223445555555554 3 467899999999999999998864 5789999
Q ss_pred EcCCCCcch-HHHhhccCCCceeee---eccCCCCC--ccCChhhHHHhhccCceEEEEeCCCCCccccC-CHHHHHHHH
Q 038416 102 IPRPGYPLY-EIHAAGSNNNLEARH---YDLLPEKR--WEVDLDGVEALADENTVAIVIINPGNPCGNVF-SYQHLQKIA 174 (387)
Q Consensus 102 ~~~p~~~~~-~~~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~-~~~~~~~l~ 174 (387)
++.|+|++. ...+. ..|.+... .|+..+.. ...|++++++++++++++|+++.++||||..+ +.+++++|.
T Consensus 135 ~~~~~y~~~~~~~~~--~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~ 212 (395)
T 1vef_A 135 AAMRGFSGRTMGSLS--VTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAR 212 (395)
T ss_dssp EETTCCCCSSHHHHH--TCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHH
T ss_pred EEcCCcCCCchhhhh--hcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHH
Confidence 999999764 44555 56665321 12211100 01489999999988888877655678999764 688899999
Q ss_pred HHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 175 RTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
++|+++|+++|+|++|+++.+.+... ++.......+++ |+||+++. |+|+||+++++ ++++.+....
T Consensus 213 ~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~--------~~~~~l~~~~ 279 (395)
T 1vef_A 213 EITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE--------EVARSMPKGG 279 (395)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH--------HHHHTSCTTS
T ss_pred HHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH--------HHHhhhccCC
Confidence 99999999999999999765444321 111111111222 88999876 89999999976 5666655421
Q ss_pred -hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEEecCcccccCCCcHH
Q 038416 255 -NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP-VKPQGAMFVMVKLNVSMLEDIGDDL 332 (387)
Q Consensus 255 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (387)
..+.+++++.+.++..+++...+ .+..++++++++++.+.|++++. ..+ ..+..|+++|+.++. +..
T Consensus 280 ~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~~~~~~~~-------~~~ 348 (395)
T 1vef_A 280 HGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLMVGLELKE-------KAA 348 (395)
T ss_dssp SCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTEEEEEESS-------CSH
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEEEEEEEcC-------hHH
Confidence 23456778888888777765322 34567788888889899988732 211 123456788888763 245
Q ss_pred HHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 333 EFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
++...+++++||.+.++. .+++||+++ .+++++++++++|++++
T Consensus 349 ~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 349 PYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 677777636799999863 689999884 68999999999998875
No 132
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.97 E-value=1e-30 Score=246.55 Aligned_cols=332 Identities=14% Similarity=0.077 Sum_probs=217.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++.+++..... ++. ....+++..+++.+.+.++ .+.++|++|+|+++|+..+++.+. ..+++|++.
T Consensus 60 ~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~ 134 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLDH--LFS-EMLSRPVVDLATRLANITP--PGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGF 134 (433)
T ss_dssp TCHHHHHHHHHHHHHCCC--CCT-TCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHHHhCcc--ccc-ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEE
Confidence 589999999998875311 111 1222344455555544443 457899999999999999998753 235799999
Q ss_pred CCCCcchHHHhhccCC------------CceeeeeccCC--CCCc--------cCChhhHHHhhcc---CceEEEEeCC-
Q 038416 104 RPGYPLYEIHAAGSNN------------NLEARHYDLLP--EKRW--------EVDLDGVEALADE---NTVAIVIINP- 157 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~------------g~~~~~~~~~~--~~~~--------~~~~~~l~~~~~~---~~~~v~l~~p- 157 (387)
+|+|+++..... .. ...+..++++. ...+ .+|+++|+++++. ....+++++|
T Consensus 135 ~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~ 212 (433)
T 1zod_A 135 AQSWHGMTGAAA--SATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPI 212 (433)
T ss_dssp TTCCCCSSHHHH--HTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSE
T ss_pred CCCcCCCChhHH--hhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccc
Confidence 999987544322 11 01233333221 1111 2368999988863 3344556777
Q ss_pred CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 158 GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 158 ~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+||||. .++.+++++|.++|++||+++|+||+|+++.+.+... .+.......+ +.|+||.++. |+|+||+++++
T Consensus 213 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~sK~~~~-G~~ig~~~~~~ 287 (433)
T 1zod_A 213 LSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTLSKTLGA-GLPLAAIVTSA 287 (433)
T ss_dssp ETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEECHHHHT-TSSCEEEEECH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEecccccC-CCCeeEEEEhH
Confidence 588996 5778889999999999999999999999876554321 1111111112 3489999886 89999999976
Q ss_pred CCCcccchhHHHHHHhhh-h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCC
Q 038416 237 PNGILQNSGFVDSIKGCL-N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVK 309 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~ 309 (387)
++++.+.... . .+++.+++++.++.++++...+ ....++++++++.+++.|++ ++.+. . .
T Consensus 288 --------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-~-~ 354 (433)
T 1zod_A 288 --------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIG-D-V 354 (433)
T ss_dssp --------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEE-E-E
T ss_pred --------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeE-E-E
Confidence 6777776532 1 3566788888888887764322 12345555666666666654 34333 2 2
Q ss_pred CCceEEEEEecCccc---ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 310 PQGAMFVMVKLNVSM---LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 310 ~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
+..|.|+|+.++... .+......++...++ ++||.+.||..|+.++++||++ ..+++++++++++|+++++++
T Consensus 355 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 355 RGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 344667788775311 000012456666665 6799999987665558999987 468999999999999998764
No 133
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=243.57 Aligned_cols=335 Identities=13% Similarity=0.068 Sum_probs=242.9
Q ss_pred CCCcHHHHHHHHHHhcCC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-----
Q 038416 24 LSDSTVAEDAVVDALRTA---HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----- 95 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----- 95 (387)
++.++.+.+++.+++... +..+|....+..++++.+++++.+.+|.+.+++++++++|+++++..++.++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 74 YHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp SCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 345578888888877642 233455555678899999999988888665678999999999999999999864
Q ss_pred CC---CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 96 PG---ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 96 ~g---~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
+| +.|+++.|+|.++...+. ..|.+++.+++++ +++.+|+++|++++++++++|++++|+||||.+.+ +++
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~--~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~ 227 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAY--YFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEG 227 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHH--HSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTT
T ss_pred CCCCCceEEEeCCccHHHHHHHH--HcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHH
Confidence 56 899999999999999999 9999999999864 35689999999999999999999999999999977 788
Q ss_pred HHHHHHhcCcEEeecccccccccC-----CCCCc-cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 173 IARTARNLGIIVIADEVYNHLAFG-----STPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
|.++|+++|+++|+|++|+++... +.+.. ++. ....+..+++.|++|+ +.++.++|++++++ +.
T Consensus 228 i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~ 297 (497)
T 3mc6_A 228 LGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SD 297 (497)
T ss_dssp TTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HH
T ss_pred HHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HH
Confidence 999999999999999999965421 11111 111 1112234778899998 56778899999876 33
Q ss_pred HHHHHhhhhcc------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCce
Q 038416 247 VDSIKGCLNAA------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQGA 313 (387)
Q Consensus 247 ~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~g 313 (387)
........... ++.+.....++..++.......+.+..++..++++++.+.|++ +|++.++..|..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~ 377 (497)
T 3mc6_A 298 LRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS 377 (497)
T ss_dssp HHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS
T ss_pred HHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee
Confidence 33221111000 0111111222333333333466788889999999999999999 7898866445545
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee-CChHhHHHHHHHHHHHHHHhhh
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA-AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
. +++..+. .+..++...| .++||.+.++.. +..+|+++. .+++++++++++|++++++..+
T Consensus 378 ~-v~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 378 V-ISFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp E-EEEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred E-EEEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4 4444431 1456666666 556998876543 457899995 5789999999999999987754
No 134
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=1.9e-29 Score=242.81 Aligned_cols=312 Identities=13% Similarity=0.073 Sum_probs=229.5
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCE--EEcCChHHHHHHHHHhhcCCC--------CeEEEcCCCCcchHHHh
Q 038416 45 CYSPTLGVPSARRGIADYLNRDLPYKLSPEDV--YLTLGCSQAIEISLSVLARPG--------ANILIPRPGYPLYEIHA 114 (387)
Q Consensus 45 ~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~~~g--------~~vl~~~p~~~~~~~~~ 114 (387)
.|....+..++++.+++++.+.+|.+.+++++ ++|+|+++++..+++++.++| |+|+++.|+|.++...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 44444466788888888888877765555788 999999999999999998766 89999999999999999
Q ss_pred hccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 115 AGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 115 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+ ..|.+++.++++. ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+++.
T Consensus 210 ~--~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~ 282 (514)
T 3mad_A 210 Q--YFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFI 282 (514)
T ss_dssp H--HHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred H--HcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEeccccccc
Confidence 9 8999999999864 5678999999999999999999999999999987 7889999999999999999999765
Q ss_pred cC-----CCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh------------hcc
Q 038416 195 FG-----STPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL------------NAA 257 (387)
Q Consensus 195 ~~-----~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~------------~~~ 257 (387)
+. +.+..++. ....+..+++.|++|+ +.++.++|++++++ +......... ...
T Consensus 283 ~~~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
T 3mad_A 283 LPWAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFA 352 (514)
T ss_dssp HHHHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSC
T ss_pred chhHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccC
Confidence 41 22111221 1122235788899999 46778899999876 3322211100 001
Q ss_pred CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHH
Q 038416 258 SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLK 337 (387)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (387)
++.+.....++..++......++.+..+++.++++++.+.|++++++.++ .+..+ ++++..+. .+..++...
T Consensus 353 gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~~ 424 (514)
T 3mad_A 353 GSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVMEE 424 (514)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHHH
Confidence 12222223333344443345677888999999999999999998888855 34434 55655432 145667666
Q ss_pred HHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHHHhhh
Q 038416 338 LAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 338 ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+ .++||.+ +|.. .++++|+++. ++++++++++++|+++++++.+
T Consensus 425 L-~~~Gi~v-~g~~--~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 425 M-AGRGWRL-NGLH--RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp H-HTTTCBC-EEET--TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred H-HhcCCEe-ccCC--CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 4559987 4432 3578999995 3579999999999999988764
No 135
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=1.2e-29 Score=236.74 Aligned_cols=314 Identities=16% Similarity=0.158 Sum_probs=231.1
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcCC
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPRP 105 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~p 105 (387)
++.+.+++.+.+... .|....+..++|+.++++++ . +++++++|+++++..++.++ +++||+|+++.|
T Consensus 43 ~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~ 111 (399)
T 2oga_A 43 RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQLALRGLGIGPGDEVIVPSH 111 (399)
T ss_dssp HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHHHHHHHhCCCCcCEEEECCC
Confidence 489999999988653 45555677899999999983 2 36788888899999999999 899999999999
Q ss_pred CCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 106 GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 106 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
+|+++...++ ..|.+++.+++++ +++.+|++++++++++++++|+ ++||||...+ +++|.++|+++|+++|
T Consensus 112 ~~~~~~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l~~~~~~~li 182 (399)
T 2oga_A 112 TYIASWLAVS--ATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDALRELADRHGLHIV 182 (399)
T ss_dssp SCTHHHHHHH--HTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCEEC
T ss_pred ccHHHHHHHH--HCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHHHHHHHHcCCEEE
Confidence 9999999999 8999999998864 2467899999999988787766 5789999977 8889999999999999
Q ss_pred ecccccccc-cCCCCCccccccCCCccEEEEecC--cccccccccceEEEEeeCCCCcccchhHHHHHHhhhhc------
Q 038416 186 ADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSI--SKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA------ 256 (387)
Q Consensus 186 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~--sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~------ 256 (387)
+|++|+.+. +++. .+..+. .+++.|+ +|.++.+| ++|++++++ +++++.+......
T Consensus 183 ~Dea~~~g~~~~~~---~~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~~~~~l~~~~~~g~~~~~ 247 (399)
T 2oga_A 183 EDAAQAHGARYRGR---RIGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PELAERLRMLRNYGSRQKY 247 (399)
T ss_dssp EECTTCTTCEETTE---ETTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HHHHHHHHHHHBTTCSSTT
T ss_pred EECcccccCccCCe---eccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HHHHHHHHHHHhcCccccc
Confidence 999998653 3222 121111 3788888 79998878 899999863 2576666654321
Q ss_pred -------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 257 -------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 257 -------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
+...+++.+.++...++. +++..++.+++++++.+.|++++++.....|..+.++|+.++... .
T Consensus 248 ~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----~ 318 (399)
T 2oga_A 248 SHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT----E 318 (399)
T ss_dssp CCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC----S
T ss_pred cccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC----C
Confidence 123456666665555543 344556666778888889988878774434555666553333211 1
Q ss_pred cHHHHHHHHHHhcCeEEEcCCcc-----------CC------------CCeEEEEee--CChHhHHHHHHHHHHHHHHhh
Q 038416 330 DDLEFCLKLAKEESVIILPGRTV-----------GM------------KNWLRIAFA--AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~-----------~~------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+..++...| .++||.+.++... +. .+++||+++ .++++++++++.|++++++++
T Consensus 319 ~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 319 RRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp SHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 455666666 5679999875321 00 157999995 589999999999999988765
Q ss_pred h
Q 038416 385 K 385 (387)
Q Consensus 385 ~ 385 (387)
+
T Consensus 398 ~ 398 (399)
T 2oga_A 398 Q 398 (399)
T ss_dssp -
T ss_pred c
Confidence 4
No 136
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=4.7e-30 Score=240.76 Aligned_cols=317 Identities=14% Similarity=0.147 Sum_probs=220.9
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------CC-
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------PG- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~g- 97 (387)
.+|.+.+++.+++.... .++. ....++++.+++.+.+..+ .+++++++|+++|+..+++++.. +|
T Consensus 74 ~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~ 146 (420)
T 2pb2_A 74 CHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEANETAFKLARHYACVRHSPFK 146 (420)
T ss_dssp TCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC
Confidence 68999999999987531 1211 1123455555555555443 57999999999999999998865 67
Q ss_pred CeEEEcCCCCcchHHH-hhccCCCce------------eeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccc-
Q 038416 98 ANILIPRPGYPLYEIH-AAGSNNNLE------------ARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGN- 163 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~- 163 (387)
++|++++|+|+++... .. ..|.+ +..++. .|+++|++++++++++|++++++|++|+
T Consensus 147 ~~vi~~~~~yh~~~~~~~~--~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~~~~vi~~p~~~~gG~~ 217 (420)
T 2pb2_A 147 TKIIAFHNAFHGRSLFTVS--VGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDHTCAVVVEPIQGEGGVQ 217 (420)
T ss_dssp CEEEEETTCCCCSSHHHHH--HSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTTEEEEEECSEETTTTSE
T ss_pred CEEEEEeCCcCCcCHHHHH--hcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccCceEEEEeCCcCCCCee
Confidence 5999999999876433 33 34433 222221 2799999999888888888888888885
Q ss_pred cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 164 VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
.++.+++++|.++|++||+++|+||+|.++.+.+.... +..+....+++ |+||.++ +|+|+||+++++
T Consensus 218 ~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~-~~~~~~~~dii---t~sK~l~-~G~~iG~~~~~~------- 285 (420)
T 2pb2_A 218 AATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFA-YMHYGVTPDIL---TSAKALG-GGFPVSAMLTTQ------- 285 (420)
T ss_dssp ECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSH-HHHHTCCCSEE---EECGGGG-TTSCCEEEEECH-------
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHH-HHhcCCCCCeE---Eeccccc-CCCceEEEEEhH-------
Confidence 68999999999999999999999999998766554321 11122112233 7899987 899999999975
Q ss_pred hhHHHHHHhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCCCceEEEEE
Q 038416 244 SGFVDSIKGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----PCITCPVKPQGAMFVMV 318 (387)
Q Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~g~~~~~ 318 (387)
++++.+... ...+++++++++.++.++|+...+ ++..++++++++++.+.|+++ |.+. . .+..|.++++
T Consensus 286 -~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~v 359 (420)
T 2pb2_A 286 -EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFS-D-IRGMGLLIGA 359 (420)
T ss_dssp -HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEE-E-EEEETTEEEE
T ss_pred -HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecceEEEE
Confidence 555555432 123457788888888887775332 345566667777777777654 3322 1 1334667788
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhh
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.++.... .+..++...++ ++||.+.|+. ++++|+++ ..+++++++++++|+++++++.
T Consensus 360 ~~~~~~~---~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 360 ELKPKYK---GRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp EECGGGT---TCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCch---HHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 7764210 13456766664 5799999874 57999997 4689999999999999987653
No 137
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=7.5e-30 Score=240.57 Aligned_cols=322 Identities=14% Similarity=0.115 Sum_probs=214.4
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTL---------GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~---------~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~- 94 (387)
++|+.+.+++.+.+... ..|+... ...++|+.+++++ ++++++|++|+|+++++..++.++.
T Consensus 29 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 29 PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 67899999999988652 2333311 1358899999988 4567899999999999999999986
Q ss_pred -------CCCCeEEEcCCCCcch-----------------HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCce
Q 038416 95 -------RPGANILIPRPGYPLY-----------------EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV 150 (387)
Q Consensus 95 -------~~g~~vl~~~p~~~~~-----------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 150 (387)
++||+|+++.|+|+.+ ....+ ..|.+++.++++.+ ++.+|+++|+++++++++
T Consensus 101 ~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~--~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~ 177 (432)
T 3a9z_A 101 CFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVE--DQVAEVTFVPVSKV-NGQVEVEDILAAVRPTTC 177 (432)
T ss_dssp HHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHH--TTSCEEEEECCCTT-TSSCCHHHHHHTCCTTEE
T ss_pred hhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHH--hcCcEEEEEecCcc-cCCcCHHHHHHhccCCce
Confidence 5899999999999765 34445 57899999987642 346899999999988899
Q ss_pred EEEEeCCCCCccccCCHHHHHHHHHHHHhcC----------cEEeecccccccccCCCCCccccccCCCccEEEEecCcc
Q 038416 151 AIVIINPGNPCGNVFSYQHLQKIARTARNLG----------IIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISK 220 (387)
Q Consensus 151 ~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~----------~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK 220 (387)
+|++++|+||||.+++ +++|.++|++++ +++|+|++|+.+. ....+.....+ +++.|+||
T Consensus 178 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~~~~d---~~~~s~~K 247 (432)
T 3a9z_A 178 LVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVEDLGVD---FLTIVGHK 247 (432)
T ss_dssp EEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHHHCCS---EEEEEGGG
T ss_pred EEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhhcCCC---EEEEehhH
Confidence 9999999999999999 567888888998 9999999997532 22222223322 66899999
Q ss_pred cccccccceEEEEeeCCCCcccchhHHHHHHh--------hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Q 038416 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG--------CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETAD 292 (387)
Q Consensus 221 ~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 292 (387)
++ |.|+||+++++... ...+.. .....++++.+.+.++.++++.. +.++++..+++.++++
T Consensus 248 ~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~ 316 (432)
T 3a9z_A 248 FY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRD 316 (432)
T ss_dssp TT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred hc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 86 35699999975210 111111 01123456777777777777643 3467888899999999
Q ss_pred HHHHHhhcCCCCCCC-CCC-----CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------------
Q 038416 293 ICYERIKEIPCITCP-VKP-----QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV-------------- 352 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~-~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-------------- 352 (387)
++.+.|++++++.+. ..| ..+..+++.++... .+..++...+ .++.+.+|..+
T Consensus 317 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~ 389 (432)
T 3a9z_A 317 YLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLS 389 (432)
T ss_dssp HHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHH
T ss_pred HHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHh
Confidence 999999875444321 011 12223444444210 1233444432 26776666433
Q ss_pred -CC-----CCeEEEEeeC--ChHhHHHHHHHHHHHHHHhhh
Q 038416 353 -GM-----KNWLRIAFAA--EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 353 -~~-----~~~~Ri~~~~--~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+. .+++||+++. +++++++++++|+++++++++
T Consensus 390 ~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 390 CGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp TTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 21 3789999975 899999999999999887653
No 138
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=4.4e-29 Score=234.69 Aligned_cols=329 Identities=16% Similarity=0.139 Sum_probs=233.8
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHH
Q 038416 12 SPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSP-TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISL 90 (387)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 90 (387)
+.+.|.| +++.|+.+.+++.+.+... .|+. ..+..++|+.++++++ .+++++|+|+++++..++
T Consensus 20 ~l~~~~p----~~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l 84 (424)
T 2po3_A 20 PLLVGRP----NRIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLA 84 (424)
T ss_dssp CEETTCC----CCCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHH
T ss_pred cccccCC----CCCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHH
Confidence 3556555 8888999999999988753 4665 5678999999999993 358999999999999999
Q ss_pred HhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHH
Q 038416 91 SVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 91 ~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
.++. +||+|+++.|+|+++...+. ..|.+++.+++++ +++.+|+++|++++++++++|++++ |||...+ +
T Consensus 85 ~~l~-~gd~Vlv~~~~~~~~~~~~~--~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~---l 154 (424)
T 2po3_A 85 HAAG-LTGEVIMPSMTFAATPHALR--WIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCA---A 154 (424)
T ss_dssp HHHT-CCSEEEEESSSCTHHHHHHH--HTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCC---H
T ss_pred HHcC-CCCEEEECCCccHHHHHHHH--HcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCC---H
Confidence 9985 78999999999999999988 8999999999864 3567899999999988888888764 8998754 8
Q ss_pred HHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 171 QKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
++|.++|+++|+++|+|++|+ ++.+++. ++..+. + +++.|+||.++++|.|+||+++++ +++++.
T Consensus 155 ~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~-d---i~~~S~sk~K~l~~~~~G~~v~~~-------~~l~~~ 220 (424)
T 2po3_A 155 DQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG-D---AEVFSFHATKAVNAFEGGAVVTDD-------ADLAAR 220 (424)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECCTTSSSCCSSCEEEEESC-------HHHHHH
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECCe---eccccc-C---EEEEeCCCCCCccCCCCeEEEeCC-------HHHHHH
Confidence 899999999999999999999 5655542 222221 2 889999966667778999999873 257777
Q ss_pred HHhhhhccC----C------cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce----EE
Q 038416 250 IKGCLNAAS----H------PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA----MF 315 (387)
Q Consensus 250 ~~~~~~~~~----~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g----~~ 315 (387)
+........ . ...+.+.++...+.. ...+++..++..++++++.+.|++++++.+...+.++ .+
T Consensus 221 l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 298 (424)
T 2po3_A 221 IRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQY 298 (424)
T ss_dssp HHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCC
T ss_pred HHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEE
Confidence 765432111 0 001112222222221 2346667777888888898999888777744223333 23
Q ss_pred EEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--------------CC-------CeEEEEe--eCChHhHHHH
Q 038416 316 VMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--------------MK-------NWLRIAF--AAEPATLEDG 372 (387)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~~-------~~~Ri~~--~~~~e~~~~~ 372 (387)
+++.++.... + .+..++...+ .++||.+.+..... .+ ..+|+++ ..++++++++
T Consensus 299 ~~i~~~~~~~-~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~ 375 (424)
T 2po3_A 299 VIVEIDEATT-G-IHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRV 375 (424)
T ss_dssp EEEEECHHHH-S-SCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHH
T ss_pred EEEEECCccc-h-hhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHH
Confidence 3355542000 0 1345565544 67799998731100 01 1277774 4589999999
Q ss_pred HHHHHHHHHHhh
Q 038416 373 LERIKAFCQRHA 384 (387)
Q Consensus 373 ~~~l~~~~~~~~ 384 (387)
++.|++++++..
T Consensus 376 ~~~L~~~~~~~~ 387 (424)
T 2po3_A 376 ADLLRLCATRGR 387 (424)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhH
Confidence 999999887654
No 139
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.97 E-value=2.5e-30 Score=244.78 Aligned_cols=338 Identities=15% Similarity=0.091 Sum_probs=221.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--CCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--PGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~ 103 (387)
.+|.+.+++++++... .+|....+..+++..+++++.+..+.. ..++|++|+|+++|++.+++.+.. .++.|++.
T Consensus 81 ~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~ 157 (453)
T 4ffc_A 81 SHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAVENAIKVARLATGRPAVVAF 157 (453)
T ss_dssp TCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 4899999999998764 234433344566677777776655421 357999999999999999987652 45899999
Q ss_pred CCCCcchHHHhhccCCC--------------ceeeeeccCC--CCCccCC--------hhhHHHhhccCceEEEEeCCCC
Q 038416 104 RPGYPLYEIHAAGSNNN--------------LEARHYDLLP--EKRWEVD--------LDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g--------------~~~~~~~~~~--~~~~~~~--------~~~l~~~~~~~~~~v~l~~p~n 159 (387)
+++|+++...+. ..+ ..+..++.+. .+.++.+ ++.|++.+.+++.++++++|.|
T Consensus 158 ~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~ 235 (453)
T 4ffc_A 158 DNAYHGRTNLTM--ALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQ 235 (453)
T ss_dssp TTCCCCSSHHHH--HHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSB
T ss_pred cCccCCcchHHH--hhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCC
Confidence 999997654433 211 1334444321 1112233 3566666666677888888877
Q ss_pred Ccc--ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCC
Q 038416 160 PCG--NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDP 237 (387)
Q Consensus 160 ptG--~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~ 237 (387)
++| ..++.+.+++|.++|++||+++|+||+|.++...|... ....+.. ...+.++||.++. |+|+||+++++
T Consensus 236 ~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~---~pdi~t~sK~~~~-G~~~G~~~~~~- 309 (453)
T 4ffc_A 236 GEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGI---VPDIVTMAKGIAG-GMPLSAVTGRA- 309 (453)
T ss_dssp TTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTC---CCSEEEECGGGGT-TSSCEEEEEEH-
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCC---CcchHhhhhhhcC-CcCeEEEEECH-
Confidence 665 45577889999999999999999999999886655322 1111211 1224578999866 89999999976
Q ss_pred CCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 038416 238 NGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMF 315 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (387)
++++.+.... ..+++.+++++.++.++|+...+ ..+++..+.....++.+.+.++.+|.+. . .+..|.+
T Consensus 310 -------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~-~~~~g~~ 380 (453)
T 4ffc_A 310 -------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG-E-VRGRGAM 380 (453)
T ss_dssp -------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEE-E-EEEETTE
T ss_pred -------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE-E-EEeeceE
Confidence 6777666443 24677889999988888875322 2233333333444444544445565444 2 2344667
Q ss_pred EEEecCccc--ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhhc
Q 038416 316 VMVKLNVSM--LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 316 ~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
+++.+.... .+......++...+ .++||.+.|+..+ ++++|++++ .+++++++++++|+++++++.+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 381 LAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp EEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 887763210 00111234455555 5679999987543 478999874 58999999999999999987654
No 140
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=2.5e-29 Score=238.65 Aligned_cols=325 Identities=15% Similarity=0.112 Sum_probs=221.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
+.++.+.+++. .. ...|....+..+||+.++++++ .+++++|+|+++|+..++.+++++|| +++.
T Consensus 55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~ 119 (456)
T 2ez2_A 55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG 119 (456)
T ss_dssp CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence 45677776665 22 2356666678899999999993 35899999999999999999999999 7888
Q ss_pred CCC-cchHHHhhccCCCceeeeeccCCC----C----CccCChhhHHHhhccCc----eEEEEeCCCC-CccccCCHHHH
Q 038416 105 PGY-PLYEIHAAGSNNNLEARHYDLLPE----K----RWEVDLDGVEALADENT----VAIVIINPGN-PCGNVFSYQHL 170 (387)
Q Consensus 105 p~~-~~~~~~~~~~~~g~~~~~~~~~~~----~----~~~~~~~~l~~~~~~~~----~~v~l~~p~n-ptG~~~~~~~~ 170 (387)
|+| ..+...+. ..|.+++.+++... + ++.+|+++|++++++++ ++|++++|+| |||.+++.+++
T Consensus 120 ~~~~~~~~~~~~--~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l 197 (456)
T 2ez2_A 120 NMYFTTTRYHQE--KNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANM 197 (456)
T ss_dssp SSCCHHHHHHHH--HTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred ccccchhHHHHH--HcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHH
Confidence 999 66677888 89999998887631 2 36789999999987665 8889999998 99999999999
Q ss_pred HHHHHHHHhcCcEEeecccccc----------cccCCCCCcccc-ccCCCccEEEEecCcccccccccceEEEEeeCCCC
Q 038416 171 QKIARTARNLGIIVIADEVYNH----------LAFGSTPYVPMG-VFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNG 239 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~ 239 (387)
++|+++|++||+++|+|++|+. +.+.+....++. .+....+++++ |++|. +.+| +.||+++++
T Consensus 198 ~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~--- 271 (456)
T 2ez2_A 198 RAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND--- 271 (456)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC---
T ss_pred HHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC---
Confidence 9999999999999999999986 344443211110 01111234444 78887 4456 789999842
Q ss_pred cccchhHHHHHHhhhhc------cCCcchHHHHH-HHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 240 ILQNSGFVDSIKGCLNA------ASHPVTFIQAA-VPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 240 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
+++++.+...... ..+.+.....+ +...++... ....++..++.+.+.+.|++. ++.+. .|.+
T Consensus 272 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~~ 341 (456)
T 2ez2_A 272 ----DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAA-GVPIV-EPVG 341 (456)
T ss_dssp ----HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHT-TCCBC-SSCC
T ss_pred ----HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcC-CCccc-cCCC
Confidence 2577766544321 11122222222 222222111 234445555667777778775 67643 6777
Q ss_pred eEEEEEecCcccccCCCcHHHH-----HHHHHHhcCeEEEc-CCcc------------CCCCeEEEEee---CChHhHHH
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEF-----CLKLAKEESVIILP-GRTV------------GMKNWLRIAFA---AEPATLED 371 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gi~v~~-g~~~------------~~~~~~Ri~~~---~~~e~~~~ 371 (387)
++++|+.+.... ++. +..++ ...+++++||.+.+ |..| ...+++||+++ .+++++++
T Consensus 342 ~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~ 419 (456)
T 2ez2_A 342 GHAVFLDARRFC-EHL-TQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDV 419 (456)
T ss_dssp SSEEEEEHHHHT-TTS-CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHH
T ss_pred ceEEEEEhHHhc-CCC-ChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHH
Confidence 889998763200 011 12223 55555778998765 4322 11378999997 68999999
Q ss_pred HHHHHHHHHHHhh
Q 038416 372 GLERIKAFCQRHA 384 (387)
Q Consensus 372 ~~~~l~~~~~~~~ 384 (387)
++++|++++++..
T Consensus 420 ~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 420 VADGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHHHTGG
T ss_pred HHHHHHHHHhhhh
Confidence 9999999987654
No 141
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=1.4e-29 Score=239.22 Aligned_cols=345 Identities=12% Similarity=0.044 Sum_probs=225.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-CCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-EDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~ 87 (387)
.+++.+-+.+....++ .+|.+.+++.+++... .+|+...+..++++.+++++.+.++. .. +++++|+|+++|+.
T Consensus 44 ~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggsea~~ 118 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSDANE 118 (439)
T ss_dssp EEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHHHHH
T ss_pred EEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHHHHH
Confidence 3456555544333233 7899999999998764 34554456667888888888776542 33 69999999999999
Q ss_pred HHHHhh--cCCCCeEEEcCCCCcchHHHhhccCCCce---------------eeeeccCCCCCccC-----ChhhHHHhh
Q 038416 88 ISLSVL--ARPGANILIPRPGYPLYEIHAAGSNNNLE---------------ARHYDLLPEKRWEV-----DLDGVEALA 145 (387)
Q Consensus 88 ~~~~~l--~~~g~~vl~~~p~~~~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~-----~~~~l~~~~ 145 (387)
.+++++ ..+++.|++.+|+|+++...+. ..+.. +..++.+. .+.. |+++|++++
T Consensus 119 ~al~~~~~~~~~~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 119 AAYRAIVKATGRSGVIAFAGAYHGCTVGSM--AFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHSCCEEEEETTCCCCSSHHHH--CC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCCcHHHH--hhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHH
Confidence 999985 2356789999999987655444 33221 12233221 1111 689999988
Q ss_pred ----ccCceEEEEeCCCCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcc
Q 038416 146 ----DENTVAIVIINPGNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISK 220 (387)
Q Consensus 146 ----~~~~~~v~l~~p~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK 220 (387)
.+++++++++.++|++|.+. +.+++++|.++|++||+++|+||+|+++...+... .+..+....+ +.|+||
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-~~~~~~~~~d---i~s~sK 270 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-CFEHEGFVPD---ILVLGK 270 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-GGGGTTCCCS---EEEECG
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhcCCCCC---EEEEcc
Confidence 44566677666677888865 45559999999999999999999999876555322 1222222122 238999
Q ss_pred cccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 221 RWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 221 ~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
+++ +|+|+||+++++ ++++.+.... ..++ .+++++.++.++++...+ ++..++++++++.+++.|+
T Consensus 271 ~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~ 337 (439)
T 3dxv_A 271 GLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLS 337 (439)
T ss_dssp GGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 987 599999999976 6766665542 2345 788888888887764322 2233444444444444444
Q ss_pred ----cCCCCCCCCCCCceEEEEEecCcccc---cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHH
Q 038416 300 ----EIPCITCPVKPQGAMFVMVKLNVSML---EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 300 ----~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~ 370 (387)
.++.+. . .+..|.|+++.+..... +......++...++ ++||.+.|+..+ ++++||++ ..++++++
T Consensus 338 ~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~ 412 (439)
T 3dxv_A 338 ELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDIH 412 (439)
T ss_dssp HHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHHH
T ss_pred HHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHHH
Confidence 344433 2 34456677776621100 01112345666664 559999987532 48999987 45899999
Q ss_pred HHHHHHHHHHHHhh
Q 038416 371 DGLERIKAFCQRHA 384 (387)
Q Consensus 371 ~~~~~l~~~~~~~~ 384 (387)
+++++|+++++++.
T Consensus 413 ~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 413 KALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 142
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.97 E-value=9.7e-30 Score=236.98 Aligned_cols=316 Identities=14% Similarity=0.130 Sum_probs=216.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------CCCC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------RPGA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~~g~ 98 (387)
.+|.+.+++++++..... .+. ....++++.+++++.+..+ .+++++++|+++|+..+++.+. .+++
T Consensus 53 ~~p~v~~a~~~~~~~~~~-~~~--~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~ 125 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLH-TSN--LYYNENIAAAAKNLAKASA----LERVFFTNSGTESIEGAMKTARKYAFNKGVKGG 125 (395)
T ss_dssp SCHHHHHHHHHHHTTCSC-CCT--TSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhccc-ccc--ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCC
Confidence 589999999999875321 121 1223444555555544332 5799999999999999998875 3479
Q ss_pred eEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCcccc-
Q 038416 99 NILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNV- 164 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~- 164 (387)
+|+++.|+|+++..... ..+. ++..++. .|+++|+++++++++++++..++|++|..
T Consensus 126 ~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~ 196 (395)
T 3nx3_A 126 QFIAFKHSFHGRTLGAL--SLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNEKTCAIILESVQGEGGINP 196 (395)
T ss_dssp EEEEETTCCCCSSHHHH--TTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCTTEEEEEEESEECTTSCEE
T ss_pred EEEEEcCCcCCCCHHHH--hhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccCCeEEEEEeCccCCCCccc
Confidence 99999999988754444 3322 2222221 27899999998888888888777777776
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS 244 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~ 244 (387)
++.+++++|.++|++||+++|+||+|.++...+... ....++. ...+.|+||.++. |+|+||+++++
T Consensus 197 ~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~---~~d~~t~sK~~~~-G~~~G~~~~~~-------- 263 (395)
T 3nx3_A 197 ANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQI---LPDIMTSAKALGC-GLSVGAFVINQ-------- 263 (395)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTC---CCSEEEECGGGTT-TSCCEEEEECH--------
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCC---CCCEEEecccccC-CCceEEEEEch--------
Confidence 778889999999999999999999999876554322 1112221 1224578999875 89999999976
Q ss_pred hH-HHHHHhhh-hccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecC
Q 038416 245 GF-VDSIKGCL-NAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLN 321 (387)
Q Consensus 245 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 321 (387)
++ ++.+.... ..+++.+++++.++.++++... +...++..+.....++.+.+.+..+|.+. . .+..|.++++.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~ 341 (395)
T 3nx3_A 264 KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCK-K-RKGLGFMQGLSLD 341 (395)
T ss_dssp HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC
T ss_pred hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeE-E-EEeEEEEEEEEeC
Confidence 66 66665543 2456778888888888877432 22333333444444445544444455443 2 2345678888776
Q ss_pred cccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHH
Q 038416 322 VSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~ 382 (387)
.. .+..++...+ .++||.+.++. .+++||++ ..+++++++++++|++++++
T Consensus 342 ~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 342 KS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred Cc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 42 1355666666 56699999874 68999987 45899999999999998864
No 143
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.8e-29 Score=233.23 Aligned_cols=288 Identities=15% Similarity=0.126 Sum_probs=204.0
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh--ccCCCceeeeecc
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA--GSNNNLEARHYDL 128 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~--~~~~g~~~~~~~~ 128 (387)
...+|++.+++++ ..+++++++|+++|+..++.+++++||+|+++.|+|+++...+. ....|.++..++.
T Consensus 82 ~~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 4456677777766 23688999999999999999999999999999999999877665 0038999988876
Q ss_pred CCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCC
Q 038416 129 LPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGS 208 (387)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 208 (387)
+ |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .++ .+.
T Consensus 154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g- 217 (414)
T 3ndn_A 154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG- 217 (414)
T ss_dssp T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT-
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC-
Confidence 3 789999999999999999999999999977 888999999999999999999853221 112 122
Q ss_pred CccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHH-HHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHH
Q 038416 209 IVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVD-SIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIG 285 (387)
Q Consensus 209 ~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 285 (387)
..+++.|+||.++.+| +++|++++++ +.+. .++... ......++...+.+...++. +..+.+
T Consensus 218 --~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 282 (414)
T 3ndn_A 218 --VDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-----LAIRVQ 282 (414)
T ss_dssp --CSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred --CCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-----HHHHHH
Confidence 2388999999998888 8999999875 4444 444332 23444555554444444433 566677
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcC
Q 038416 286 LLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPG 349 (387)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 349 (387)
+..++++.+.+.|++.|.+..+..|. .|.++++.++............++..+ +..++.+..|
T Consensus 283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G 361 (414)
T 3ndn_A 283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLG 361 (414)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCS
T ss_pred HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCC
Confidence 77888888889998877655343443 467888888531000001233444443 5556666666
Q ss_pred CccC-----------------------CCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 350 RTVG-----------------------MKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 350 ~~~~-----------------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+.+. .++++|+|++. |+.+.+++.|.+++
T Consensus 362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 5431 14689999987 66666677776665
No 144
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=3e-30 Score=237.10 Aligned_cols=299 Identities=12% Similarity=0.064 Sum_probs=203.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCC--eEEEcCCCCcchHH---HhhccC
Q 038416 44 NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGA--NILIPRPGYPLYEI---HAAGSN 118 (387)
Q Consensus 44 ~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~~p~~~~~~~---~~~~~~ 118 (387)
..|+...+..+|++.++++++ . +..++++|+++++..++.++.++|| .|+++.+.|..... ... .
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~--~ 110 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKE--L 110 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHH--H
T ss_pred ccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhh--c
Confidence 356665688999999999983 2 3445557888999999999988887 56666665543322 334 4
Q ss_pred CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc-cccCCHHHHHHHHHHHHhcCcEEeecccccc--ccc
Q 038416 119 NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC-GNVFSYQHLQKIARTARNLGIIVIADEVYNH--LAF 195 (387)
Q Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt-G~~~~~~~~~~l~~~~~~~~~~li~D~~~~~--~~~ 195 (387)
.|.++..++. +++.+|+++++++. +++++++++|+||| |.+++.+++++|+++|++||+++|+|++|.. ..+
T Consensus 111 ~g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 185 (357)
T 3lws_A 111 HPIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPY 185 (357)
T ss_dssp SSCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHH
T ss_pred cCcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhh
Confidence 5778777763 34478999999874 48999999999998 9999999999999999999999999999872 111
Q ss_pred CCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCc--chHHHHHHHHHh
Q 038416 196 GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHP--VTFIQAAVPRIV 272 (387)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~l 272 (387)
.+.....+.. . .. +++.|+||+++.++ .||+++++ ++++.+..... ..... ....+.++...+
T Consensus 186 ~~~~~~~~~~--~-~d-~~~~s~sK~~~~~~--gg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 251 (357)
T 3lws_A 186 YEKTAAEIAG--L-FD-SIYISFYKGLGGIA--GAILAGPA--------AFCQTARIWKRRYGGDLISLYPYIVSADYYY 251 (357)
T ss_dssp HTCCHHHHHT--T-SS-EEEEESSSTTCCSS--CEEEEECH--------HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred cCCChHHHHh--c-CC-EEEEeccccCCCCc--eEEEEcCH--------HHHHHHHHHHHHhcCCcccchHHHHHHHHHH
Confidence 1222222211 1 11 44789999983332 29988865 67887765532 22121 222233333334
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc
Q 038416 273 DETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV 352 (387)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 352 (387)
+. +. +..+++.++++.+.+.|+++|++.+...|..++++|++++.... .+..++.. .+.++||.+.||..+
T Consensus 252 ~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~l~~~Gi~v~~g~~~ 322 (357)
T 3lws_A 252 EL----RK-DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKLEQ-VQEETGLGFVGYLVD 322 (357)
T ss_dssp HH----HT-TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHHHH-HHHHHCEESCSCCEE
T ss_pred HH----HH-HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHHHH-HHHhcCeEEeccccc
Confidence 32 22 23344567788889999998888852356778899998864210 01334444 457779999999766
Q ss_pred CC-CCeEEEEee-----CChHhHHHHHHHHHHHH
Q 038416 353 GM-KNWLRIAFA-----AEPATLEDGLERIKAFC 380 (387)
Q Consensus 353 ~~-~~~~Ri~~~-----~~~e~~~~~~~~l~~~~ 380 (387)
.. ..++|++++ .+.+++++++++|.+++
T Consensus 323 ~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 323 KDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp CSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 52 238999985 46789999999998764
No 145
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=1.2e-29 Score=239.33 Aligned_cols=327 Identities=12% Similarity=0.034 Sum_probs=211.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--CCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--PGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~ 103 (387)
.+|.+.+++++++.......|+. ....+|++.+++++ + +.++|++++|+++++..+++.+.. ++++|+++
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~ 143 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKF 143 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEE
Confidence 58999999999887643334443 34456667776665 2 578999999999999999998764 67899999
Q ss_pred CCCCcchHHHhhccCC-CceeeeeccCCCCCc------------cCChhhHHHhhcc--CceEEEEeCC-CCCccccC-C
Q 038416 104 RPGYPLYEIHAAGSNN-NLEARHYDLLPEKRW------------EVDLDGVEALADE--NTVAIVIINP-GNPCGNVF-S 166 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~~~v~l~~p-~nptG~~~-~ 166 (387)
.|+|+++...+. .. |............+. .-|+++|+++++. ...++++++| +|++|... +
T Consensus 144 ~~~yhg~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~ 221 (434)
T 3l44_A 144 AGCYHGHSDLVL--VAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPK 221 (434)
T ss_dssp TTCCCCSSGGGG--BC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCC
T ss_pred cCccCCCcHHHH--hhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCC
Confidence 999998665444 32 222111111100000 0178999988863 3344555555 55666655 8
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
++++++|.++|++||+++|+||+|.+| ..+... .+..+... ..+.++||.++ +|+|+||+++++ ++
T Consensus 222 ~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~---~di~t~sK~~~-~G~~iG~~~~~~--------~i 287 (434)
T 3l44_A 222 PGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVT---PDLTALGKVIG-GGLPIGAYGGKK--------EI 287 (434)
T ss_dssp TTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCC---CSEEEEEGGGG-TTSSCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCC---CCeeehhhhhc-CCcCeeeEEEcH--------HH
Confidence 888999999999999999999999987 444321 11112211 11457899987 799999998865 67
Q ss_pred HHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEE
Q 038416 247 VDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 247 ~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~~~~ 318 (387)
++.+... ...+++.+++++.++.++++...+ ++..++++++++.+++.|++ ++.+. . .+..|.++++
T Consensus 288 ~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~~ 362 (434)
T 3l44_A 288 MEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDI-T-LNRLKGALTV 362 (434)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCE-E-EEEETTEEEE
T ss_pred HHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCE-E-EEeeccEEEE
Confidence 7766552 123567888898888888774322 22333444444444444443 43222 1 2345667777
Q ss_pred ecCcccc--------cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhhc
Q 038416 319 KLNVSML--------EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 319 ~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
.+..... +......++...+ .++||.+.|+. .+.+|+++..+++++++++++|++++++++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 363 YFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGRAFAALADN 433 (434)
T ss_dssp EESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHHHHHHHHhc
Confidence 6632111 0000123455555 55699999874 35789987889999999999999999887653
No 146
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=4.1e-30 Score=236.65 Aligned_cols=316 Identities=12% Similarity=0.060 Sum_probs=220.7
Q ss_pred CCCcHHHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCC-C-EEEcCChHHHHHHHHHhh
Q 038416 24 LSDSTVAEDAVVDALRTAH--------YNCYSPTLGVPSARRGIADYLNRDLPYKLSPE-D-VYLTLGCSQAIEISLSVL 93 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~-~-i~~~~g~~~a~~~~~~~l 93 (387)
.++|+.+++++.+.+.+.. ..++. .+..++++.+.+.+.+.+|. +++ + +++|+|+++++..++.++
T Consensus 13 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~t~a~~~~~~~l 88 (362)
T 2c0r_A 13 AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGASTQFAMIPMNF 88 (362)
T ss_dssp CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCchHHHHHHHHhc
Confidence 5899999999999875320 11121 12344566666666665553 443 5 567899999999999999
Q ss_pred cCCCCeEEEcCCCCcch--HHHhhccCCCceeeeeccCCC--CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHH
Q 038416 94 ARPGANILIPRPGYPLY--EIHAAGSNNNLEARHYDLLPE--KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~--~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+++||+|+++.+.+++. ...++ ..| ++..++++.+ .+..+|.++++ +++++++|++++|+||||..++ +
T Consensus 89 ~~~gd~vl~~~~~~~~~~~~~~~~--~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~--~ 161 (362)
T 2c0r_A 89 LKEGQTANYVMTGSWASKALKEAK--LIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFK--A 161 (362)
T ss_dssp CCTTCEEEEEECSHHHHHHHHHHH--HHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETTTTEECS--S
T ss_pred CCCCCeEEEEecCcHhHHHHHHHH--HhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCccceecc--c
Confidence 99999999887776552 35566 678 8888887532 22234665543 6778999999999999999754 2
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++| +|+++|+|++|+.+.. ..++..+ .+++.|+||+++++| +||+++++ ++++.
T Consensus 162 l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~--------~~~~~ 216 (362)
T 2c0r_A 162 FPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE--------DLVAE 216 (362)
T ss_dssp CCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG--------GGSSS
T ss_pred cccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH--------HHHhh
Confidence 5554 7999999999986431 1223222 277889999998888 89999976 23222
Q ss_pred HHh-------------hhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCCCCC--Cc
Q 038416 250 IKG-------------CLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCI-TCPVKP--QG 312 (387)
Q Consensus 250 ~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~--~~ 312 (387)
+.. .....++++.+.+.++..+++...+. .++++.++++++++++.+.|++++++ .....+ ..
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 296 (362)
T 2c0r_A 217 SPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRS 296 (362)
T ss_dssp CCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBC
T ss_pred ccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcC
Confidence 221 11234577788888888888754343 67888999999999999999988535 532221 23
Q ss_pred eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.++++.++.. .+..++...| .++||.+.+|..+ .+++|||++ .++++++++++.|+++++++
T Consensus 297 ~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 297 DMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp SSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34566666521 1345666665 6679988887655 467999996 47899999999999988765
No 147
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=2.2e-30 Score=238.23 Aligned_cols=313 Identities=14% Similarity=0.084 Sum_probs=218.9
Q ss_pred CCcHHHHHHHHHHhcCC---CCCCCCC---CCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCCh-HHHHHHHHHhh
Q 038416 25 SDSTVAEDAVVDALRTA---HYNCYSP---TLG----VPSARRGIADYLNRDLPYKLSPEDVYLTLGC-SQAIEISLSVL 93 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~---~~~~y~~---~~~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~-~~a~~~~~~~l 93 (387)
++|+.+++++.+.+... ....|.. ..+ ..++|+.+++++ +.. ++++|++|+|+ ++|+..++.++
T Consensus 13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~~~g~gt~al~~~~~~l 87 (360)
T 1w23_A 13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILFLQGGASLQFTMLPMNL 87 (360)
T ss_dssp CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCcchHHHHHHHHHh
Confidence 78899999999987642 0111111 122 345566666655 322 35699999998 99999999998
Q ss_pred cCC---CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHH-hhccCceEEEEeCCCCCccccCCHHH
Q 038416 94 ARP---GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA-LADENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 94 ~~~---g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+.+ ||.|+++.++|..+ ..++ ..| +++.++++++++ .+|++++++ ++++++++|++++|+||||.+++ +
T Consensus 88 ~~~~~~g~~vi~~~~~~~~~-~~~~--~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~ 160 (360)
T 1w23_A 88 LTKGTIGNYVLTGSWSEKAL-KEAK--LLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--N 160 (360)
T ss_dssp CCTTCEEEEEECSHHHHHHH-HHHH--TTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--S
T ss_pred cCCCCcccEEEecchhHHHH-HHHH--HhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCCCCcceecc--c
Confidence 865 56677776666543 3456 789 999998864333 378899998 88888999999999999999987 3
Q ss_pred HHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+. +++|+++|+|++|+.+.. ..++..+ .+++.|+||.++++| +||+++++ +++++
T Consensus 161 i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~--------~~~~~ 215 (360)
T 1w23_A 161 FP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK--------DLLNT 215 (360)
T ss_dssp CC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH--------HHHCS
T ss_pred cc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH--------HHHhh
Confidence 32 279999999999986432 1223333 278999999988766 89999875 44443
Q ss_pred HHhhh-------------hccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCCCCC--Cc
Q 038416 250 IKGCL-------------NAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCI-TCPVKP--QG 312 (387)
Q Consensus 250 ~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~--~~ 312 (387)
+.... ....+++...+.++..+++...+. ++++..++++++++.+.+.|++++++ .....| .+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 295 (360)
T 1w23_A 216 KVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRS 295 (360)
T ss_dssp CCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBC
T ss_pred cccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhcc
Confidence 33211 112345666666666666643333 67888999999999999999988655 322123 23
Q ss_pred eEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 313 AMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
++++|+.++.. .+..++...+ .++||.+.+|..+ .+++|++++ .+++++++++++|++++++
T Consensus 296 ~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 296 LMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp SSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 55888887631 1234566664 6679999887653 578999996 4889999999999988764
No 148
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=1.1e-30 Score=240.29 Aligned_cols=316 Identities=14% Similarity=0.046 Sum_probs=214.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe--EE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN--IL 101 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~--vl 101 (387)
++++|.+.+++.+.... ..|.+..+..++|+.++++++ . +..++++|+++++..++.++.++||+ |+
T Consensus 25 ~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi 93 (359)
T 3pj0_A 25 VGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQQIALRIWADRKENRRVA 93 (359)
T ss_dssp HHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 45678888888774432 345555677899999999983 2 33355688889999999999888876 55
Q ss_pred EcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc-cccCCHHHHHHHHHHH
Q 038416 102 IPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC-GNVFSYQHLQKIARTA 177 (387)
Q Consensus 102 ~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt-G~~~~~~~~~~l~~~~ 177 (387)
++.+.|..... ... ..|.+++.++. +++.+|+++++++ .+++++|++++|+||+ |.+++.+++++|+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~--~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~ 167 (359)
T 3pj0_A 94 YHPLSHLEIHEQDGLKE--LQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYC 167 (359)
T ss_dssp ECTTCHHHHSSTTHHHH--HHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHH
T ss_pred EeccceeeehhcchHHH--hcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHH
Confidence 55555433221 223 45888887765 3457899999998 7789999999999988 7999999999999999
Q ss_pred HhcCcEEeecccccccc--cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhh
Q 038416 178 RNLGIIVIADEVYNHLA--FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLN 255 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (387)
++||+++|+|++|..+. +.+.....+. .... +++.|+||+++.++. |+++.++ ++++.++....
T Consensus 168 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~~--------~l~~~~~~~~~ 233 (359)
T 3pj0_A 168 HEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIAG--AILAGND--------DFVQEAKIWKR 233 (359)
T ss_dssp HHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSSC--EEEEECH--------HHHHHHHHHHH
T ss_pred HHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcce--EEEECCH--------HHHHHHHHHHH
Confidence 99999999999987533 1122222221 1111 455689998765532 7777754 78888876432
Q ss_pred -ccCCc--chHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHH
Q 038416 256 -AASHP--VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDL 332 (387)
Q Consensus 256 -~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (387)
..... ......+....++. .. +..+++.++++.+.+.|++++++.+...|..++++|+.++.... .+..
T Consensus 234 ~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~ 305 (359)
T 3pj0_A 234 RYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD---EIGA 305 (359)
T ss_dssp HTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH---HHHH
T ss_pred HhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc---hhHH
Confidence 22122 22222222233332 12 34455677888899999998888743246677788887764210 0233
Q ss_pred HHHHHHHHhcCeEEEcCCccCC--CCeEEEEee-----CChHhHHHHHHHHHHH
Q 038416 333 EFCLKLAKEESVIILPGRTVGM--KNWLRIAFA-----AEPATLEDGLERIKAF 379 (387)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~~-----~~~e~~~~~~~~l~~~ 379 (387)
++ .+.+.++||.+.||..|.. ..++|++++ .+.+++++++++|.+.
T Consensus 306 ~l-~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 306 IL-TKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HH-HHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 44 4445777999999977654 357999985 4678999999998765
No 149
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=3.7e-28 Score=228.00 Aligned_cols=325 Identities=15% Similarity=0.175 Sum_probs=225.9
Q ss_pred CCC-CcHHHHHHHHHHhcCCCCCCCCCCCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCC
Q 038416 23 LLS-DSTVAEDAVVDALRTAHYNCYSPTLG----VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARP 96 (387)
Q Consensus 23 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~ 96 (387)
+++ .++.+.+++.+++.......|++..| ..++++.+++++ + .+ ++++++++++++..++.++ +++
T Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g--~~--~~i~~~~gt~al~~~~~~~~~~~ 81 (418)
T 2c81_A 10 EWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----G--VP--YCVPTTSGSTALMLALEALGIGE 81 (418)
T ss_dssp CSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----T--CS--EEEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----C--CC--cEEEeCCHHHHHHHHHHHcCCCC
Confidence 444 58999999999987654434666556 456666666666 2 22 5777888899999999999 899
Q ss_pred CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 97 GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
||+|+++.|+|.++...+. ..|.+++.+++++ +++.+|++++++++++++++|+++ ||||...+ +++|.++
T Consensus 82 gd~Vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~ 152 (418)
T 2c81_A 82 GDEVIVPSLTWIATATAVL--NVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEI 152 (418)
T ss_dssp TCEEEEESSSCTHHHHHHH--HTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHH
T ss_pred cCEEEECCCccHhHHHHHH--HcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHH
Confidence 9999999999999999999 9999999998854 356899999999998888888764 47898754 8899999
Q ss_pred HHhcCcEEeecccccccc-cCCCCCccccccCCCccEEEEecC--cccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 177 ARNLGIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSI--SKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~--sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
|+++|+++|+|++|+.+. +++.. +..+. .+.+.|| +|.++. | ++||+++++ +++++.+...
T Consensus 153 ~~~~~~~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~ 216 (418)
T 2c81_A 153 AQEHNLFVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQL 216 (418)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHH
T ss_pred HHHCCCEEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHH
Confidence 999999999999999865 44322 22221 1667777 999877 7 999999853 2566666543
Q ss_pred hhcc-------------CC--c---c--------hHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 038416 254 LNAA-------------SH--P---V--------TFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCP 307 (387)
Q Consensus 254 ~~~~-------------~~--~---~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (387)
.... +. . . ...+.++.. . ..+.+++..++.+++++++.+.|+++|++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~--~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 292 (418)
T 2c81_A 217 RADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILL--D--QLQELDDKNAIREKNAMFLNDALSKIDGIKVM 292 (418)
T ss_dssp HBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHH--H--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred HHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccC
Confidence 3210 00 0 0 111222111 1 11235667777778888999999888888744
Q ss_pred CCCCc-eEEEE----EecCcccccCCCcHHHHHHHHHHhcCeE---EEcCCccC--------------------------
Q 038416 308 VKPQG-AMFVM----VKLNVSMLEDIGDDLEFCLKLAKEESVI---ILPGRTVG-------------------------- 353 (387)
Q Consensus 308 ~~~~~-g~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~~-------------------------- 353 (387)
..+.+ +...| +.++.....+ .+..++...|.+++||. +.+|....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (418)
T 2c81_A 293 KRPPQVSRQTYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWR 371 (418)
T ss_dssp CCCTTEEECCCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHH
T ss_pred CCCCCCcccccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccc
Confidence 34444 33222 4554210001 14566777775544999 88875210
Q ss_pred ---C-------CCeEEEEe--eC-ChHhHHHHHHHHHHHHHHhhh
Q 038416 354 ---M-------KNWLRIAF--AA-EPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 354 ---~-------~~~~Ri~~--~~-~~e~~~~~~~~l~~~~~~~~~ 385 (387)
. .+.+|+++ .. +++|++.+++.|++++++++.
T Consensus 372 ~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 372 GLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp TCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred cCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 0 14799999 46 899999999999999877643
No 150
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=2e-29 Score=238.00 Aligned_cols=326 Identities=14% Similarity=0.079 Sum_probs=219.2
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDAL---RTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAI 86 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~---~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 86 (387)
.+..+.| .++++++++.+.++..... .......|+. .+.+ +++.+++++.+.++ .+++++++|+++|+
T Consensus 91 ~i~l~~g---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~-~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt~al 161 (464)
T 1ibj_A 91 LVNLDNK---FDPFDAMSTPLYQTATFKQPSAIENGPYDYTR-SGNP-TRDALESLLAKLDK----ADRAFCFTSGMAAL 161 (464)
T ss_dssp HTCCCCS---SCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTT-TCCH-HHHHHHHHHHHHHT----CSEEEEESSHHHHH
T ss_pred EEECCCC---CCCCCCCCccHHhhhhhhhhcccccCCccccC-CCCH-HHHHHHHHHHHHhC----CCeEEEECCHHHHH
Confidence 3455565 1347888888887766431 1112335653 3444 67777777766554 24778888889999
Q ss_pred HHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCcc
Q 038416 87 EISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCG 162 (387)
Q Consensus 87 ~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG 162 (387)
..++. ++++||+|+++.|+|+++... ++ ..|.+++.+++. |++++++++++++++|++++|+||||
T Consensus 162 ~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~--~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~NptG 231 (464)
T 1ibj_A 162 SAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVP--RSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPRQ 231 (464)
T ss_dssp HHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSG--GGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTTC
T ss_pred HHHHH-HhCCCCEEEEECCCchhHHHHHHHHHH--HcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCCC
Confidence 98886 778999999999999988653 45 678898888752 78999999998999999999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~ 241 (387)
.+++ +++|+++|+++|+++|+|++|.... ...++. + +..+++.|+||+++. +|+++||+++++
T Consensus 232 ~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~----- 295 (464)
T 1ibj_A 232 QISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG----- 295 (464)
T ss_dssp CCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS-----
T ss_pred Eeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh-----
Confidence 9986 8899999999999999999998521 112222 2 346899999998864 489999999974
Q ss_pred cchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHH----------HHhhcCCCCCCCCCC
Q 038416 242 QNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICY----------ERIKEIPCITCPVKP 310 (387)
Q Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~~~~~~~~~ 310 (387)
+++++.+..... .+...+++.++++...++... ..+++..+......+++. +.|+++|++.+. .+
T Consensus 296 --~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~-~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~ 371 (464)
T 1ibj_A 296 --EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA-LRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-FS 371 (464)
T ss_dssp --HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-TT
T ss_pred --HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH-HHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-hc
Confidence 256677765543 345567778887777766421 112222222222222322 123333444422 23
Q ss_pred C---ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCC------------cc----------CC-CCeEEEEeeC
Q 038416 311 Q---GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGR------------TV----------GM-KNWLRIAFAA 364 (387)
Q Consensus 311 ~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------------~~----------~~-~~~~Ri~~~~ 364 (387)
. .|.++++.++. ......++..+ +..||.+.+|. .+ +. ++++|++++.
T Consensus 372 ~~~g~g~~~~~~l~~-----~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~ 445 (464)
T 1ibj_A 372 QAKGAGSVFSFITGS-----VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI 445 (464)
T ss_dssp TCSCCCSEEEEECSC-----HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS
T ss_pred cCCCCceEEEEEECC-----HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC
Confidence 2 35577777741 00122344444 55688888775 11 12 4689999988
Q ss_pred ChHhHHHHHHHHHHHHHH
Q 038416 365 EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 365 ~~e~~~~~~~~l~~~~~~ 382 (387)
|++++++++|++++++
T Consensus 446 --edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 446 --EDVDDLISDLDIAFKT 461 (464)
T ss_dssp --SCHHHHHHHHHHHHHS
T ss_pred --CCHHHHHHHHHHHHhh
Confidence 8999999999998865
No 151
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=1.2e-29 Score=240.34 Aligned_cols=332 Identities=14% Similarity=0.099 Sum_probs=213.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-----C---CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-----R---PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-----~---~g 97 (387)
.+|.+.+++.+++..... ....+..+++..+++++.+.++ ...+ |++|+|+++|++.+++.+. . ++
T Consensus 66 ~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~ 139 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHR 139 (452)
T ss_dssp CCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred CCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 479999999999875321 2223334555666666555443 3334 9999999999999999987 4 67
Q ss_pred CeEEEcCCCCcchHHHhhccCCCce-------------eeeeccCCCCCccC-C---------hhhHHHhhc----cCce
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLE-------------ARHYDLLPEKRWEV-D---------LDGVEALAD----ENTV 150 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~---------~~~l~~~~~----~~~~ 150 (387)
++|++..|+|+++..... ..+.. +..++......... | +++|+++++ ++++
T Consensus 140 ~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~ 217 (452)
T 3n5m_A 140 YKFMSRYRGYHGNTMATM--AATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIA 217 (452)
T ss_dssp CEEEEETTCCCCSSHHHH--HSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEE
T ss_pred CEEEEECCCcCCCCHHHH--hcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEE
Confidence 999999999998654444 22221 22222110000000 1 788998886 4556
Q ss_pred EEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-c
Q 038416 151 AIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-W 227 (387)
Q Consensus 151 ~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~ 227 (387)
++++..+ +| ||..+ +.+++++|.++|++||+++|+||+|.++...|.... ...++.. ..+.++||+++. | +
T Consensus 218 ~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~-~~~~~~~---~di~t~sK~l~~-G~~ 291 (452)
T 3n5m_A 218 AFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFG-FMNYDVK---PDIITMAKGITS-AYL 291 (452)
T ss_dssp EEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTCC---CSEEEECGGGGT-TSS
T ss_pred EEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccch-hhhcCCC---CCEEeecccccC-CCc
Confidence 6666666 79 99765 778899999999999999999999999876654221 2222211 223468999876 8 9
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHh---h----hhccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhh
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKG---C----LNAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
|+||+++++ ++++.+.. . ...+++.++++++++.++|+...+ ..+++..+.....++.+.+.++
T Consensus 292 ~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 363 (452)
T 3n5m_A 292 PLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIG 363 (452)
T ss_dssp CCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999976 67777743 1 124567888999998888875332 2233333333334444444444
Q ss_pred cCCCCCCCCCCCceEEEEEecCcccccC--C--CcHHHHHHHHHHhcCeEEEcCCccCC--CCeEEEEe--eCChHhHHH
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSMLED--I--GDDLEFCLKLAKEESVIILPGRTVGM--KNWLRIAF--AAEPATLED 371 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~Ri~~--~~~~e~~~~ 371 (387)
++|.+.. .+..|.++++.+....... . ....++...+ .++||.+.|+..|.. .+++||++ ..+++++++
T Consensus 364 ~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~ 440 (452)
T 3n5m_A 364 EHPLVGD--IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAF 440 (452)
T ss_dssp TCTTEEE--EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHH
T ss_pred cCCCeEE--EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHH
Confidence 4554432 2334556666653211000 0 0013455555 566999999875532 57999986 468999999
Q ss_pred HHHHHHHHHHH
Q 038416 372 GLERIKAFCQR 382 (387)
Q Consensus 372 ~~~~l~~~~~~ 382 (387)
++++|++++++
T Consensus 441 ~l~~l~~~l~~ 451 (452)
T 3n5m_A 441 VIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 152
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=7.4e-29 Score=233.42 Aligned_cols=320 Identities=13% Similarity=0.132 Sum_probs=210.7
Q ss_pred CCC-CcHHHHHHHHHHhcCCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-----
Q 038416 23 LLS-DSTVAEDAVVDALRTAHYN--CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA----- 94 (387)
Q Consensus 23 ~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----- 94 (387)
.++ .+|.+.+++.+++...... .|. .....++++.+++++ ..+++++++|+++|+..+++.+.
T Consensus 78 ~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGseA~~~al~~a~~~~~~ 148 (433)
T 1z7d_A 78 NQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL--------GYDKVLMMNTGAEANETAYKLCRKWGYE 148 (433)
T ss_dssp TTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc--------CCCeEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 466 8899999999998763211 121 122345566666655 25799999999999999998864
Q ss_pred ----CCC-CeEEEcCCCCcchHHH-hhccCCC------------ceeeeeccCCCCCccCChhhHHHhh-ccCceEEEEe
Q 038416 95 ----RPG-ANILIPRPGYPLYEIH-AAGSNNN------------LEARHYDLLPEKRWEVDLDGVEALA-DENTVAIVII 155 (387)
Q Consensus 95 ----~~g-~~vl~~~p~~~~~~~~-~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~ 155 (387)
.+| ++|++++|+|+++... +. ..| .++..++. .|+++|++++ ++++++|++.
T Consensus 149 ~~g~~~gr~~vi~~~~~yhg~~~~~~~--~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~~~~~~vi~e 219 (433)
T 1z7d_A 149 VKKIPENMAKIVVCKNNFSGRTLGCIS--ASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKDPNVCAFIVE 219 (433)
T ss_dssp TSCCCTTCCEEEEETTC----------------------------CEEEECT-------TCHHHHHHHHTSTTEEEEEEC
T ss_pred ccCCCCCCCeEEEEeCCcCCcchhhhc--ccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCCCCEEEEEEE
Confidence 367 9999999999876433 22 223 12333332 2789999998 4566655544
Q ss_pred CCCCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEE
Q 038416 156 NPGNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLV 233 (387)
Q Consensus 156 ~p~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~ 233 (387)
..++++|.. ++.+++++|.++|++||+++|+||+|.++...+.... +..+....+ +.|+||.++ +| +|+||++
T Consensus 220 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~-~~~~~~~~d---i~t~sK~l~-~G~~~~G~v~ 294 (433)
T 1z7d_A 220 PIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC-VHHYNVKPD---VILLGKALS-GGHYPISAVL 294 (433)
T ss_dssp SSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG-GGGGTCCCS---EEEECGGGG-TTSSCCEEEE
T ss_pred CCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchh-hHhcCCCCC---EEEECcccc-CCCCCeEEEE
Confidence 346779975 6888999999999999999999999998765553221 111221112 238999987 78 8999999
Q ss_pred eeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCC-CCC
Q 038416 234 TSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI-PCITCP-VKP 310 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~-~~~ 310 (387)
+++ ++++.+.... ..+++.++++++++.++++...+ .+..++++++++++.+.|+++ .++..+ ..+
T Consensus 295 ~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~ 363 (433)
T 1z7d_A 295 AND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVR 363 (433)
T ss_dssp ECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred ECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 976 5666555432 24567788888888877765322 234556666777777777653 122211 123
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
..|.++++.++... .+..++...++ ++||.+.|+. .+++|++++ .+++++++++++|+++++++..
T Consensus 364 ~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 364 GKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIVKTVKFFDE 431 (433)
T ss_dssp EETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred eeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45678888876321 13556777665 5699998852 579999884 5899999999999999887653
No 153
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.97 E-value=2.7e-29 Score=238.38 Aligned_cols=334 Identities=12% Similarity=0.042 Sum_probs=219.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+++.+++..... +|....+..++++++++++.+.++ .+.++|++++|+++|+..+++.+.+ ++
T Consensus 67 ~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~ 143 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEK 143 (459)
T ss_dssp CCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 479999999999876421 333333445667777777766554 4567999999999999999999875 46
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCC--C-CCccCC--------hhhHHHhhcc---Cce
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLP--E-KRWEVD--------LDGVEALADE---NTV 150 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~--------~~~l~~~~~~---~~~ 150 (387)
+.|++..|+|+++...+. ..+. ++..++.+. . +++ .| +++|+++++. +..
T Consensus 144 ~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~ 220 (459)
T 4a6r_A 144 KTLIGRWNGYHGSTIGGA--SLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKV 220 (459)
T ss_dssp CEEEEETTCCCCSSHHHH--HHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CEEEEECCCcCCccHHHH--hhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCE
Confidence 899999999998764443 2211 222333211 0 111 34 6788887752 445
Q ss_pred EEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccc
Q 038416 151 AIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 151 ~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
++++++| ++++|. .++.+++++|.++|++||+++|+||+|.+|...|.... ...++...+ +.++||+++.+|+|
T Consensus 221 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~-~~~~~~~pd---i~t~sK~l~gg~~~ 296 (459)
T 4a6r_A 221 AAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFG-HQHFGFQPD---LFTAAKGLSSGYLP 296 (459)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSH-HHHHTCCCS---EEEECGGGGTTSSC
T ss_pred EEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccch-HhhcCCCCC---eeehhhhhcCCCCC
Confidence 5666666 455565 55889999999999999999999999999876664221 112222112 33688997666699
Q ss_pred eEEEEeeCCCCcccchhHHHHHH---hhh-hccCCcchHHHHHHHHHhhhccH-HHHHHHH-HHHHHHHHHHHHHhhcCC
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIK---GCL-NAASHPVTFIQAAVPRIVDETNE-AFFAKII-GLLKETADICYERIKEIP 302 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~~ 302 (387)
+|++++++ ++++.+. ... ..+++.+++++.++.++|+...+ ..+++.. +.....++.+.+.|++++
T Consensus 297 lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 368 (459)
T 4a6r_A 297 IGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFE 368 (459)
T ss_dssp CEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCT
T ss_pred ccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999976 7888776 222 24567889999998888875332 2333333 344444444445555555
Q ss_pred CCCCCCCCCceEEEEEecCccccc------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLE------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLE 374 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~ 374 (387)
.+.. .+..|.|+++.+...... ......++...+ .++||.+.|+. +++||++ ..++++++++++
T Consensus 369 ~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~~l~ 440 (459)
T 4a6r_A 369 HVDD--VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DHIVSAPPLVMTRAEVDEMLA 440 (459)
T ss_dssp TEEE--EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TEEEECCCTTCCHHHHHHHHH
T ss_pred CeEE--EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CEEEEECCCCCCHHHHHHHHH
Confidence 4442 234466777766432100 000134555555 45699999863 8999996 568999999999
Q ss_pred HHHHHHHHhhh
Q 038416 375 RIKAFCQRHAK 385 (387)
Q Consensus 375 ~l~~~~~~~~~ 385 (387)
+|++++++..+
T Consensus 441 ~l~~~l~~~~~ 451 (459)
T 4a6r_A 441 VAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 154
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=1.8e-28 Score=228.26 Aligned_cols=314 Identities=11% Similarity=0.074 Sum_probs=225.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIPR 104 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~~ 104 (387)
.|+.+.+++.+.+.... |.+..+..++|+.++++++ .+++++++|+++|+..++.++ +++||+|+++.
T Consensus 18 ~~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~ 86 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEGDEVITPS 86 (393)
T ss_dssp CCHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CCHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCC
Confidence 34788899999887542 3334578899999999993 248999999999999999999 89999999999
Q ss_pred CCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 105 PGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 105 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
|+|+++...++ ..|.+++.+++++ +++.+|++++++++++++++|++++ |||...+ +++|.++|+++|+++
T Consensus 87 ~~~~~~~~~~~--~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~~~l 157 (393)
T 1mdo_A 87 MTWVSTLNMIV--LLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPAD---LDAIYALGERYGIPV 157 (393)
T ss_dssp SSCHHHHHHHH--HTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCC---HHHHHHHHHHHTCCB
T ss_pred CccHhHHHHHH--HCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEeC---CCCCcCC---HHHHHHHHHHcCCeE
Confidence 99999999999 8999999998864 3467899999999988888887654 7999866 889999999999999
Q ss_pred eecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc------
Q 038416 185 IADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA------ 257 (387)
Q Consensus 185 i~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~------ 257 (387)
|+|++|+. +.+.+. ++.. ..+++.|++|...++|.++||+++++ +++++.+.......
T Consensus 158 i~D~a~~~g~~~~~~---~~~~-----~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~~l~~~~~~~~~~~~~ 222 (393)
T 1mdo_A 158 IEDAAHATGTSYKGR---HIGA-----RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFADKLRSLKFHGLGVDAW 222 (393)
T ss_dssp CEECTTCTTCEETTE---ETTS-----SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHHHHHHHTBTTEECC--
T ss_pred EEECccccCCeECCe---ecCC-----CCeEEEeCCCCCccccccceEEEeCC-------HHHHHHHHHHHhcCCcccch
Confidence 99999995 334332 1111 35889999944445566899999863 25667665432211
Q ss_pred -------------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----Cce
Q 038416 258 -------------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-----QGA 313 (387)
Q Consensus 258 -------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~g 313 (387)
...+++...+....++ .+++..++.+++++.+.+.|++++ +.+...+ .++
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~ 296 (393)
T 1mdo_A 223 DRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAW 296 (393)
T ss_dssp ---------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCC
T ss_pred hhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCcee
Confidence 0122222222222222 255666667778888888998875 6533223 345
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc--------------CC-------CCeEEEEee--CChHhHH
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV--------------GM-------KNWLRIAFA--AEPATLE 370 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------------~~-------~~~~Ri~~~--~~~e~~~ 370 (387)
+++|+.++.... + .+..++...+ .++||.+.+|..+ .. ..++|++++ .++++++
T Consensus 297 ~~~~v~~~~~~~-~-~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~ 373 (393)
T 1mdo_A 297 HLFIIRVDEARC-G-ITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFD 373 (393)
T ss_dssp SCEEEECCHHHH-S-SCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHH
T ss_pred EEEEEEeccccc-c-cCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHH
Confidence 578888763100 0 1455666666 5579999987643 11 347999996 5899999
Q ss_pred HHHHHHHHHHHHh
Q 038416 371 DGLERIKAFCQRH 383 (387)
Q Consensus 371 ~~~~~l~~~~~~~ 383 (387)
.+++.|+++++..
T Consensus 374 ~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 374 RVITALHQIAGQG 386 (393)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcC
Confidence 9999999887653
No 155
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.97 E-value=8.5e-29 Score=234.97 Aligned_cols=337 Identities=13% Similarity=0.013 Sum_probs=222.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+++.+++.+... .|....+..++++++++++.+.. +.+.++|++|+|+++|++.+++++.+ ++
T Consensus 68 ~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~ 144 (460)
T 3gju_A 68 GRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEK 144 (460)
T ss_dssp CCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 479999999998875321 23333344466667777666653 34567999999999999999999874 45
Q ss_pred CeEEEcCCCCcchHHHhhccCC-------------CceeeeeccCC--C-CCccCC--------hhhHHHhhc----cCc
Q 038416 98 ANILIPRPGYPLYEIHAAGSNN-------------NLEARHYDLLP--E-KRWEVD--------LDGVEALAD----ENT 149 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~-------------g~~~~~~~~~~--~-~~~~~~--------~~~l~~~~~----~~~ 149 (387)
+.|++.+|+|+++...+. .. ...+..++.+. . ++.+.+ +++|+++++ +++
T Consensus 145 ~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~ 222 (460)
T 3gju_A 145 KKIISRWRGYHGSGVMTG--SLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETI 222 (460)
T ss_dssp CEEEEETTCCCCSSHHHH--HHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CEEEEECCCcCCCCHHHh--hccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCE
Confidence 899999999997654433 21 11233343221 0 111233 578888775 334
Q ss_pred eEEEEeCCCCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccc
Q 038416 150 VAIVIINPGNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWR 228 (387)
Q Consensus 150 ~~v~l~~p~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r 228 (387)
.+|++..++|++|. .++.+++++|.++|++||+++|+||+|.++...|.... ...++.... +.++||+++.+++|
T Consensus 223 aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~-~~~~~~~pd---i~t~sK~l~gG~~~ 298 (460)
T 3gju_A 223 AAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFG-SDHYGIKPD---LITIAKGLTSAYAP 298 (460)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCH-HHHHTCCCS---EEEECGGGTTTSSC
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccch-HhhcCCCCC---eeeeehhhcCCCCC
Confidence 44544444677777 67888899999999999999999999998866553221 112221112 34689996543389
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh-------h-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhh
Q 038416 229 LGWLVTSDPNGILQNSGFVDSIKGC-------L-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 229 ~G~i~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
+||+++++ ++++.+... . ..+++.++++++++.++|+...+ ..+++..+.....++.+.+.++
T Consensus 299 lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 370 (460)
T 3gju_A 299 LSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVG 370 (460)
T ss_dssp CEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999986 788887531 2 24567889999998888875332 3345555555556666666666
Q ss_pred cCCCCCCCCCCCceEEEEEecCccccc------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHH
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSMLE------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLED 371 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~ 371 (387)
++|.+.. .+..|.++++.+...... ......++...+ .++||.+.|+. ..+++||++ ..+++++++
T Consensus 371 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~ 444 (460)
T 3gju_A 371 GHKNVGE--VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP---QGDILGFAPPLCLTREQADI 444 (460)
T ss_dssp TSTTEEE--EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---SSCEEEECCCTTCCHHHHHH
T ss_pred cCCCeEE--EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---CCCEEEEECCCCCCHHHHHH
Confidence 6654442 234466777766432100 000133455555 55699999875 358999996 568999999
Q ss_pred HHHHHHHHHHHhhh
Q 038416 372 GLERIKAFCQRHAK 385 (387)
Q Consensus 372 ~~~~l~~~~~~~~~ 385 (387)
++++|++++++..+
T Consensus 445 ~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 445 VVSKTADAVKSVFA 458 (460)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988654
No 156
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=3.9e-28 Score=228.80 Aligned_cols=328 Identities=13% Similarity=0.080 Sum_probs=227.0
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTAHYN--CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQA 85 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 85 (387)
.+++.+.|.. ...++ .+|.+.+++.+++...... .|. .....++++.+++++ ..+++++++|+++|
T Consensus 77 ~ylD~~sg~~--~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGseA 145 (439)
T 2oat_A 77 KYFDFLSSYS--AVNQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTGVEA 145 (439)
T ss_dssp EEEESSGGGG--TTTTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSHHHH
T ss_pred EEEEccCCcc--cccCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCHHHH
Confidence 4555544432 12456 8899999999998763211 122 235577788888776 25799999999999
Q ss_pred HHHHHHhhc---------CCC-CeEEEcCCCCcchHH-HhhccCCC------------ceeeeeccCCCCCccCChhhHH
Q 038416 86 IEISLSVLA---------RPG-ANILIPRPGYPLYEI-HAAGSNNN------------LEARHYDLLPEKRWEVDLDGVE 142 (387)
Q Consensus 86 ~~~~~~~l~---------~~g-~~vl~~~p~~~~~~~-~~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l~ 142 (387)
+..+++.+. .+| ++|++.+|+|++... .+. ..| .++..++. .|+++|+
T Consensus 146 ~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~--~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 216 (439)
T 2oat_A 146 GETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAIS--SSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE 216 (439)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHT--TCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred HHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhh--cCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence 999999875 356 899999999987643 334 334 23344432 2799999
Q ss_pred Hhhc-cCceEEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCc
Q 038416 143 ALAD-ENTVAIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSIS 219 (387)
Q Consensus 143 ~~~~-~~~~~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~s 219 (387)
++++ +++++|+ ++| ++++|. .++.+++++|.++|++||+++|+||+|.++...|.... +..+....+ + .|+|
T Consensus 217 ~~l~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~-~~~~~~~~D-i--~t~s 291 (439)
T 2oat_A 217 RALQDPNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLA-VDYENVRPD-I--VLLG 291 (439)
T ss_dssp HHTTSTTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG-GGGGTCCCS-E--EEEC
T ss_pred HHhCCCCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchh-HHHhCCCCc-E--EEec
Confidence 9984 5555555 555 577897 56888999999999999999999999988765553221 111221112 2 2899
Q ss_pred ccccccc-cceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Q 038416 220 KRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 220 K~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (387)
|.++ +| +|+||+++++ ++++.+.... ..+++.+++++.++.++++...+ .+..++++++++++.+.
T Consensus 292 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 359 (439)
T 2oat_A 292 KALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNE 359 (439)
T ss_dssp GGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHH
Confidence 9986 57 8999999976 5666555432 24567788888888777765332 24567778888899999
Q ss_pred hhcCCCCCCC-CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHH
Q 038416 298 IKEIPCITCP-VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLE 374 (387)
Q Consensus 298 l~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~ 374 (387)
|+++ ++..+ ..+..|.++++.++... + .+..++...++ ++||.+.|+. ++++|++++ .++++++++++
T Consensus 360 L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~ 430 (439)
T 2oat_A 360 LMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRESIE 430 (439)
T ss_dssp HTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHHHH
T ss_pred HHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHHHH
Confidence 9876 34321 12345678888876421 0 13556777665 5699998853 588999884 68999999999
Q ss_pred HHHHHHHH
Q 038416 375 RIKAFCQR 382 (387)
Q Consensus 375 ~l~~~~~~ 382 (387)
+|++++++
T Consensus 431 ~l~~~l~~ 438 (439)
T 2oat_A 431 IINKTILS 438 (439)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998864
No 157
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=1.3e-28 Score=234.35 Aligned_cols=330 Identities=16% Similarity=0.143 Sum_probs=219.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----CCCe---E
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----PGAN---I 100 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g~~---v 100 (387)
+.+.+++.+.+.... ..|....+..+||+.++++++ .+++++|+|+++|+..++.++++ +||. |
T Consensus 55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v 125 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV 125 (467)
T ss_dssp CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence 677777777765432 257665678899999999983 36999999999999999999988 9998 9
Q ss_pred EEcCCCCcchHHHhhccCCCceeeeeccCC----C----CCccCChhhHHHhhcc----CceEEEEeCCCCCc-cccCCH
Q 038416 101 LIPRPGYPLYEIHAAGSNNNLEARHYDLLP----E----KRWEVDLDGVEALADE----NTVAIVIINPGNPC-GNVFSY 167 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~~g~~~~~~~~~~----~----~~~~~~~~~l~~~~~~----~~~~v~l~~p~npt-G~~~~~ 167 (387)
+++.+.|..+...+. ..|.+++.++... . .++.+|+++|++++++ ++++|++++|+||+ |.+++.
T Consensus 126 iv~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~ 203 (467)
T 1ax4_A 126 FISNFHFDTTAAHVE--LNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSM 203 (467)
T ss_dssp EEESSCCHHHHHHHH--HTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCH
T ss_pred EEeccccchhhHHHh--ccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCCh
Confidence 888555566666777 7888877665421 1 1346899999999874 68999999999999 899999
Q ss_pred HHHHHHHHHHHhcCcEEeecccccc--c--------ccCCCCCcccc-ccCCCccEEEEecCccccccc-ccceEEEEee
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNH--L--------AFGSTPYVPMG-VFGSIVPVITLGSISKRWIVP-GWRLGWLVTS 235 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~--~--------~~~~~~~~~~~-~~~~~~~~~~i~s~sK~~~~~-g~r~G~i~~~ 235 (387)
+++++|+++|++||+++|+|+++.. . .+.+.....+. ....... +++.|+||.++++ | |+++.+
T Consensus 204 ~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~ 279 (467)
T 1ax4_A 204 SNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIR 279 (467)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeC
Confidence 9999999999999999999998653 1 22222111111 0000011 4568999998665 3 666665
Q ss_pred CCCCcccchhHHHHHHhhhh------ccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 038416 236 DPNGILQNSGFVDSIKGCLN------AASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPV 308 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 308 (387)
++. ++++.+..... .....+.....++...++... ++.+ ++..++++.+.+.|++ +++.+.
T Consensus 280 d~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~----~~~~~~~~~l~~~L~~-~~~~~~- 347 (467)
T 1ax4_A 280 DNE------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYL----HYRIGQVKYLGDRLRE-AGIPIQ- 347 (467)
T ss_dssp SCH------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHH----HHHHHHHHHHHHHHHH-TTCCBC-
T ss_pred CHH------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHH----HHHHHHHHHHHHHHHh-CCCCcc-
Confidence 320 35555544321 011222222333332343221 1222 2333556777778877 367744
Q ss_pred CCCceEEEEEecCcc--cccC-CCcHHHHHHHHHHhcCeEEEc-CCcc-------C-----CCCeEEEEee---CChHhH
Q 038416 309 KPQGAMFVMVKLNVS--MLED-IGDDLEFCLKLAKEESVIILP-GRTV-------G-----MKNWLRIAFA---AEPATL 369 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~--~~~~-~~~~~~~~~~ll~~~gi~v~~-g~~~-------~-----~~~~~Ri~~~---~~~e~~ 369 (387)
.|.+++++|+.+... ..+. ..+..++...++.++||.+.| |..+ + ..+++|+++. .+++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i 427 (467)
T 1ax4_A 348 YPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHM 427 (467)
T ss_dssp SSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHH
T ss_pred cCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHH
Confidence 677888999883210 0100 013456777775778999998 5432 1 1378999996 679999
Q ss_pred HHHHHHHHHHHHHhh
Q 038416 370 EDGLERIKAFCQRHA 384 (387)
Q Consensus 370 ~~~~~~l~~~~~~~~ 384 (387)
++++++|++++++..
T Consensus 428 ~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 428 DYIADALIGLKEKFA 442 (467)
T ss_dssp HHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999887753
No 158
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=1.3e-28 Score=230.90 Aligned_cols=310 Identities=14% Similarity=0.065 Sum_probs=217.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC--------CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP--------TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-- 94 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~--------~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 94 (387)
+.|+.+.+++.+.+..... .+.. .....++++.+++++ ++++++|++|+|+++++..++.+++
T Consensus 39 ~~~~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~al~~al~~~~~~ 111 (416)
T 1qz9_A 39 ARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVTDTTSINLFKVLSAALRV 111 (416)
T ss_dssp CCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEECSCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHh-ccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEeCChhHHHHHHHHhhccc
Confidence 6788899999998875311 1110 123356666666665 3467899999999999998888876
Q ss_pred ----CCCCeE-EEcCCCCcchHHHhh-cc-CC--CceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccC
Q 038416 95 ----RPGANI-LIPRPGYPLYEIHAA-GS-NN--NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVF 165 (387)
Q Consensus 95 ----~~g~~v-l~~~p~~~~~~~~~~-~~-~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 165 (387)
++||++ +++.+.|+++..... .. .. |.+++.+++ +++|++++++++++|++++|+||||..+
T Consensus 112 ~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~~~v~~~~~~nptG~~~ 182 (416)
T 1qz9_A 112 QATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDTAVVMLTHVNYKTGYMH 182 (416)
T ss_dssp HHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTEEEEEEESBCTTTCBBC
T ss_pred ccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCceEEEEeccccCccccc
Confidence 889875 455567765443221 00 23 888887764 7889998888899999999999999998
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccch
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNS 244 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~ 244 (387)
+ +++|.++|+++|+++|+|++|+. +.....+..+. ..+++.|++|++ .+|.++ |++++++
T Consensus 183 ~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~l-~~g~~~~g~l~~~~-------- 243 (416)
T 1qz9_A 183 D---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAG---ADYAIGCTYKYL-NGGPGSQAFVWVSP-------- 243 (416)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHT---CSEEEECSSSTT-CCCTTCCCEEEECT--------
T ss_pred C---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcC---CCEEEecCcccC-CCCCCCeEEEEECH--------
Confidence 8 78899999999999999999984 21112222232 238889999995 456777 9999976
Q ss_pred hHHHHHHhh------------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc
Q 038416 245 GFVDSIKGC------------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE 300 (387)
Q Consensus 245 ~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
++++.+... ....++++...+.++..+++...+.++++..+++.++++++.+.|++
T Consensus 244 ~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 323 (416)
T 1qz9_A 244 QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQ 323 (416)
T ss_dssp TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 232222211 01123566667777666666543345777888899999999999988
Q ss_pred C-C--CCCCCCCCC----ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHH
Q 038416 301 I-P--CITCPVKPQ----GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLE 370 (387)
Q Consensus 301 ~-~--~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~ 370 (387)
+ | ++.+. .+. .+.++++.++ +..++...+ .++||.+... ..+++||+++ .++++++
T Consensus 324 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~~lRis~~~~~~t~~~i~ 389 (416)
T 1qz9_A 324 RCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRIMRFGFTPLYTTFTEVW 389 (416)
T ss_dssp HHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTEEEEECCTTTCCHHHHH
T ss_pred hccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCCeEEEeCcccCCCHHHHH
Confidence 5 6 67744 442 3567787775 245666666 4669987532 3689999996 4899999
Q ss_pred HHHHHHHHHHHHh
Q 038416 371 DGLERIKAFCQRH 383 (387)
Q Consensus 371 ~~~~~l~~~~~~~ 383 (387)
+++++|++++++.
T Consensus 390 ~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 390 DAVQILGEILDRK 402 (416)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998764
No 159
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=2.7e-28 Score=228.78 Aligned_cols=327 Identities=14% Similarity=0.066 Sum_probs=215.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~ 98 (387)
+.++.+.+++.+.+.+....+|+ ......++++.+.+++.+.+ +.++++|++++| ++++..++.+++++||
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--g~~~~~i~~~sG-t~a~~~~~~~~~~~gd 112 (417)
T 3n0l_A 36 FTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF--NCKFANVQPNSG-SQANQGVYAALINPGD 112 (417)
T ss_dssp CCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH--TCSEEECCCSSH-HHHHHHHHHHHSCTTC
T ss_pred CCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh--CCCCcceEeccH-HHHHHHHHHHhcCCCC
Confidence 34899999999888543222232 22223455553333333333 345566777776 7999999999999999
Q ss_pred eEEEcCCCCcchHH---HhhccCCCce--eeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHH
Q 038416 99 NILIPRPGYPLYEI---HAAGSNNNLE--ARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 99 ~vl~~~p~~~~~~~---~~~~~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
+|+++.|+|.++.. ... ..|.. +..++++ .++.+|+++|+++++ +++++|++++|+| |..++ +++
T Consensus 113 ~vl~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~---l~~ 183 (417)
T 3n0l_A 113 KILGMDLSHGGHLTHGAKVS--SSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID---FAK 183 (417)
T ss_dssp EEEEECC------------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC---HHH
T ss_pred EEEecccccccccchhhhhh--hhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC---HHH
Confidence 99999999987654 333 33433 4444443 556799999999997 6889998888886 77877 889
Q ss_pred HHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHH
Q 038416 173 IARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIK 251 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~ 251 (387)
|.++|++||+++|+|+++. ++.+.+....++. ...+++.|+||++ +|.|.||+++++ +++.+.+.
T Consensus 184 i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~-------~~~~~~~~ 249 (417)
T 3n0l_A 184 FREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND-------EELAKKIN 249 (417)
T ss_dssp HHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC-------HHHHHHHH
T ss_pred HHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC-------HHHHHHHh
Confidence 9999999999999999964 4444443222222 1238889999985 788899999973 25777776
Q ss_pred hhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCC
Q 038416 252 GCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIG 329 (387)
Q Consensus 252 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (387)
.... ...+++...+.++..++....+..+.+..+++.++++.+.+.|++. ++.+...+..++++|+.+.....
T Consensus 250 ~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~---- 324 (417)
T 3n0l_A 250 SAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVLMSFLDREF---- 324 (417)
T ss_dssp HHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTSSS----
T ss_pred hhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEEEEcccCCC----
Confidence 6543 2234455555555555554333556788888899999999999884 67644223456678887753211
Q ss_pred cHHHHHHHHHHhcCeEEEcCCccCC------CCeEEEEee------CChHhHHHHHHHHHHHHHHh
Q 038416 330 DDLEFCLKLAKEESVIILPGRTVGM------KNWLRIAFA------AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~~ 383 (387)
+. +.+.++++++||.+.++..+.. ...+|+++. .++++++++++.|++++++.
T Consensus 325 ~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 325 SG-KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp CH-HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CH-HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 33 3445556788999987543321 357999983 46799999999999988654
No 160
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.96 E-value=1.3e-28 Score=233.12 Aligned_cols=328 Identities=14% Similarity=0.132 Sum_probs=218.7
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 27 STVAEDAVVDALRTAHYNCYSPT-LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~-~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
++.+.+++.+++.... +... .+..++++.+++.+.+.++ .+.++|++|+|+++|+..+++++.. +|
T Consensus 68 ~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~ 142 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATK 142 (449)
T ss_dssp CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 8999999999987532 1111 2333555666666655443 4678999999999999999998764 67
Q ss_pred CeEEEcCCCCcchHH-HhhccCCCc------------eeeeeccCC--CCC-ccCC--------hhhHHHhhcc---Cce
Q 038416 98 ANILIPRPGYPLYEI-HAAGSNNNL------------EARHYDLLP--EKR-WEVD--------LDGVEALADE---NTV 150 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~-~~~~~~~g~------------~~~~~~~~~--~~~-~~~~--------~~~l~~~~~~---~~~ 150 (387)
|+|++..|+|+++.. .+. ..|. ++..++.+. ..+ .++| +++|+++++. ...
T Consensus 143 ~~vi~~~~~yhg~~~~~~~--~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~ 220 (449)
T 3a8u_X 143 TKMIGRARGYHGVNIAGTS--LGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNI 220 (449)
T ss_dssp CEEEEETTCCCCSSHHHHH--HCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGE
T ss_pred CEEEEECCCcCCCChhhhh--ccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCE
Confidence 999999999987643 333 2221 233333321 111 1245 8899998863 233
Q ss_pred EEEEeCC-CCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-c
Q 038416 151 AIVIINP-GNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-W 227 (387)
Q Consensus 151 ~v~l~~p-~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~ 227 (387)
.+++++| +|+||. ..+.+++++|.++|++||+++|+||+|.++...+... .+..+....+ + .|+||.++. | +
T Consensus 221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~d-i--~s~sK~l~~-G~~ 295 (449)
T 3a8u_X 221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF-GADSFGVTPD-L--MCIAKQVTN-GAI 295 (449)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-HHHHHTCCCS-E--EEECGGGGT-TSS
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch-hhhhcCCCCC-E--EEEcccccC-CCC
Confidence 4555666 567997 5678899999999999999999999998776544321 1222221112 2 288999874 7 9
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHhh---------h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKGC---------L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (387)
|+||+++++ ++++.+... . ..+++.+++++.++.++++...+ ....++++++++++++.
T Consensus 296 ~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~ 364 (449)
T 3a8u_X 296 PMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKA 364 (449)
T ss_dssp CCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred ceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 999999876 677777653 1 23456788888888877764322 24566777777888888
Q ss_pred hhcCCCCCCCC-CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHH
Q 038416 298 IKEIPCITCPV-KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLE 374 (387)
Q Consensus 298 l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~ 374 (387)
|++++.+..+. .+..|+++|+.++........+..++...++ ++||.+.++ .+++||++ ..++++++++++
T Consensus 365 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRis~~~~~t~~~i~~~l~ 438 (449)
T 3a8u_X 365 LHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG-----GDTLQFGPTFNSKPQDLDRLFD 438 (449)
T ss_dssp HHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE-----TTEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC-----CCEEEEECCCcCCHHHHHHHHH
Confidence 87753333211 2345778888886421000001225666665 569999986 27899996 568999999999
Q ss_pred HHHHHHHHh
Q 038416 375 RIKAFCQRH 383 (387)
Q Consensus 375 ~l~~~~~~~ 383 (387)
+|+++++++
T Consensus 439 ~l~~~l~~~ 447 (449)
T 3a8u_X 439 AVGEVLNKL 447 (449)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999998764
No 161
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=8.3e-29 Score=234.28 Aligned_cols=334 Identities=16% Similarity=0.070 Sum_probs=215.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--CCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--PGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~ 103 (387)
.+|.+.+++++++... .+|....+..+++..+++++.+..+. ...++|++|+|+++|++.+++.+.. .++.|++.
T Consensus 78 ~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~ 154 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAF 154 (451)
T ss_dssp TCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4899999999998764 24444345556777777777765542 1357899999999999999988753 44899999
Q ss_pred CCCCcchHHHhhccCC--------------CceeeeeccCC--------CCCcc---CChhhHHHhh----ccCceEEEE
Q 038416 104 RPGYPLYEIHAAGSNN--------------NLEARHYDLLP--------EKRWE---VDLDGVEALA----DENTVAIVI 154 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~--------------g~~~~~~~~~~--------~~~~~---~~~~~l~~~~----~~~~~~v~l 154 (387)
.++|+++...+. .. ...+..++.+. .+... .+++.+++.+ .+++.++++
T Consensus 155 ~~~yhG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi 232 (451)
T 3oks_A 155 DHAYHGRTNLTM--ALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVV 232 (451)
T ss_dssp TTCCCCSSHHHH--HHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred cCCcCCccHHHH--HhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 999997654433 21 11334444321 00000 1233333433 345667777
Q ss_pred eCCCCCcc-c-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEE
Q 038416 155 INPGNPCG-N-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 155 ~~p~nptG-~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
++|.|++| . .++.+.+++|.++|++||+++|+||+|.++.+.|... .+..+..... +.|+||.++. |+|+||+
T Consensus 233 ~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~~-G~~iG~v 307 (451)
T 3oks_A 233 IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF-ACEHEGIDPD---LIVTAKGIAG-GLPLSAV 307 (451)
T ss_dssp ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGGT-TSSCEEE
T ss_pred EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch-hhhhcCCCCC---eeeehhhhhC-CcceEEE
Confidence 88865544 4 4577779999999999999999999999887655422 2222222112 3389999866 8999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 233 VTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
++++ ++++.+.... ..+++.++++++++.++|+...+ ..+++..+.....++.+.+.++.+|.+. . .+
T Consensus 308 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~ 377 (451)
T 3oks_A 308 TGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIG-D-VR 377 (451)
T ss_dssp EEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE-E-EE
T ss_pred EECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE-E-EE
Confidence 9976 6777665443 34677889999988888875332 2233333334444444444444555444 2 23
Q ss_pred CceEEEEEecCccc--ccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSM--LEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 311 ~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
..|.++++.+.... .+......++...+ .++||.+.|+..| .+++|++++ .+++++++++++|++++++
T Consensus 378 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 378 GRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 44667777763200 00111234455555 5669999987543 378999874 5899999999999998864
No 162
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=2.9e-28 Score=225.26 Aligned_cols=312 Identities=13% Similarity=0.170 Sum_probs=220.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIP 103 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~ 103 (387)
+.++ +.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++|+..++.++ .++||+|+++
T Consensus 17 ~~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~ 84 (374)
T 3uwc_A 17 DIEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDALAMSFKMLNIGAGDEVITC 84 (374)
T ss_dssp SCHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CchH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 3444 888988887754 45555678999999999983 248899999999999999999 8999999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
.|+|+++...++ ..|.++..++++ .++.+|++++++++++++++|+ |+||||...+ +++|.++|+++|++
T Consensus 85 ~~~~~~~~~~~~--~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i~~~~~~~~~~ 154 (374)
T 3uwc_A 85 ANTFIASVGAIV--QAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPALAKIAKKHNLH 154 (374)
T ss_dssp SSSCHHHHHHHH--HTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCE
T ss_pred CCccHHHHHHHH--HcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHHHHHHHHcCCE
Confidence 999999999999 999999999886 4567899999999988887776 8899999876 88899999999999
Q ss_pred Eeecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhc----
Q 038416 184 VIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA---- 256 (387)
Q Consensus 184 li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~---- 256 (387)
+|+|++|+.+. +.+.. +..+. .+++.|++ |+++.+|. .|++++++ +++.+.+......
T Consensus 155 li~D~~~~~g~~~~~~~---~~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~~~~~~~~~~~~~~~~~ 219 (374)
T 3uwc_A 155 IVEDACQTILGRINDKF---VGSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------DEYAEKLRLYRNHGLIN 219 (374)
T ss_dssp EEEECTTCTTCEETTEE---TTSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEE
T ss_pred EEEeCCCccCceeCCee---ccccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------HHHHHHHHHHHhcCccc
Confidence 99999998643 22211 11111 37778866 99766455 78888764 2455555543210
Q ss_pred ---------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCCceEEEEEecCccccc
Q 038416 257 ---------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC-ITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 257 ---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
+...+.....+....+ ..+++..++.+++.+.+.+.|+++++ +.....+..+...|..+....
T Consensus 220 ~~~~~~~~~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (374)
T 3uwc_A 220 RDVCVEYGINCRMDTIQAVIANRLM-----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-- 292 (374)
T ss_dssp TTEESSCCCBCBCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE--
T ss_pred cCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc--
Confidence 1111222222221112 23566777778888888899988876 664433333333322221110
Q ss_pred CCCcHHHHHHHHHHhcCeEEEcCCccC----------------C-------CCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 327 DIGDDLEFCLKLAKEESVIILPGRTVG----------------M-------KNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
.+..++...+ .++||.+.++.... . ...+|++++ .++++++++++.|+++++
T Consensus 293 --~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 293 --KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp --TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 1345566655 56699998875110 0 167999884 589999999999999987
Q ss_pred Hh
Q 038416 382 RH 383 (387)
Q Consensus 382 ~~ 383 (387)
+.
T Consensus 370 ~~ 371 (374)
T 3uwc_A 370 EK 371 (374)
T ss_dssp TT
T ss_pred hh
Confidence 64
No 163
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.96 E-value=6.6e-29 Score=233.78 Aligned_cols=325 Identities=12% Similarity=0.054 Sum_probs=214.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--CCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--PGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~ 103 (387)
.+|.+.+++++++.......|+. ....+|++.+++++ + ..+++++++|+++++..+++.+.. ++++|++.
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~ 141 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAPT-EIENKLAKLVIERV------P-SIEIVRMVNSGTEATMSALRLARGYTGRNKILKF 141 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHS------T-TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHHhhCcCcCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEE
Confidence 68999999999987643333433 45567777777776 2 568999999999999999988764 56899999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCcc------------CChhhHHHhhcc--CceEEEEeCC-CCCccccC-CH
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWE------------VDLDGVEALADE--NTVAIVIINP-GNPCGNVF-SY 167 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~~~~v~l~~p-~nptG~~~-~~ 167 (387)
.|+|+++...+. ...|.....+..+...+.. -|+++|+++++. +...+++++| +|++|... +.
T Consensus 142 ~~~yhg~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~ 220 (429)
T 3k28_A 142 IGCYHGHGDSLL-IKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQP 220 (429)
T ss_dssp ETCCCCSCGGGC-SSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCT
T ss_pred CCCcCCCcHHHH-HhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCH
Confidence 999987654443 0233222222221111110 178899988863 3344555555 55666654 67
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++++|.++|++||+++|+||+|.++ ..+... ....+... ..+.++||.++ +|+|+||+++++ +++
T Consensus 221 ~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~---~di~t~sK~~~-~G~~iG~~~~~~--------~~~ 286 (429)
T 3k28_A 221 GFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVT---PDLTCLGKVIG-GGLPVGAYGGKA--------EIM 286 (429)
T ss_dssp THHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCC---CSEEEECGGGG-TTSCCEEEEECH--------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCC---Cceehhhhhhc-CCCCeEEEEEcH--------HHH
Confidence 88999999999999999999999987 444321 11112211 12447899986 489999999975 677
Q ss_pred HHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEEe
Q 038416 248 DSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE----IPCITCPVKPQGAMFVMVK 319 (387)
Q Consensus 248 ~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~g~~~~~~ 319 (387)
+.+... ...+++.+++++.++.++++... ++..++++++++++++.|++ ++.+. . .+..|.++++.
T Consensus 287 ~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~~~ 360 (429)
T 3k28_A 287 RQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEKHGIPH-H-INRAGSMIGIF 360 (429)
T ss_dssp TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHHTTCCC-E-EEEETTEEEEE
T ss_pred hhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhCCCCE-E-EEeeccEEEEE
Confidence 766542 12356788899999988888644 34555566666666665554 33333 2 23446666766
Q ss_pred cCcccc--------cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 320 LNVSML--------EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 320 ~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+..... ++.....++...+ .++||.+.|+. .+.+|+++..+++++++++++|++++++++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 361 FTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAEIAMSKLK 428 (429)
T ss_dssp SSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred EecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 643110 0000124555555 56799999874 457899888899999999999999998764
No 164
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.96 E-value=1.2e-28 Score=233.20 Aligned_cols=330 Identities=14% Similarity=0.089 Sum_probs=209.8
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----CC----
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----PG---- 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g---- 97 (387)
.+|.+.+++++++... .+|....+..+.+.++++++.+..+ .+.++|++|+|+++|++.+++.+.+ +|
T Consensus 61 ~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~ 136 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEK 136 (448)
T ss_dssp SCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCC
Confidence 4899999999998764 2333334555677777777776554 3457999999999999999999865 44
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc-------------eeeeeccCCCCCccC-----------ChhhHHHhhc---cCce
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL-------------EARHYDLLPEKRWEV-----------DLDGVEALAD---ENTV 150 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-----------~~~~l~~~~~---~~~~ 150 (387)
|+|+++.|+|+++..... ..+. .+..++.+ +.+.. |+++|+++++ +++.
T Consensus 137 ~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 212 (448)
T 3dod_A 137 QKFIAMKNGYHGDTIGAV--SVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQCLRELAQLLEEHHEEIA 212 (448)
T ss_dssp CEEEEEC-------------------------------CEEECCC--CCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred CEEEEECCCCCCccHHHH--HhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHHHHHHHHHHHHhCCCCEE
Confidence 999999999987654443 3222 12223221 11111 3788888886 3344
Q ss_pred EEEEeCCC-CCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-c
Q 038416 151 AIVIINPG-NPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-W 227 (387)
Q Consensus 151 ~v~l~~p~-nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~ 227 (387)
+|++..++ |++|. .++.+++++|.++|++||+++|+||+|+++.+.|... ....+... ..+.++||+++. | +
T Consensus 213 ~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~---~di~t~sK~l~~-G~~ 287 (448)
T 3dod_A 213 ALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQ---PDLMAAGKGITG-GYL 287 (448)
T ss_dssp EEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCC---CSEEEECGGGGT-TSS
T ss_pred EEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCC---CCEEEecccccC-CcC
Confidence 45544445 77875 5677889999999999999999999999887665432 12222211 113478999864 8 5
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHh-------hh-hccCCcchHHHHHHHHHhhhccH-HHHHHHHHHHHHHHHHHHHHh
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKG-------CL-NAASHPVTFIQAAVPRIVDETNE-AFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l 298 (387)
|+||+++++ ++++.+.. .. ..+++.+++++.++.++|+...+ +.+++..+.....++.+.+ +
T Consensus 288 ~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l 358 (448)
T 3dod_A 288 PIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-L 358 (448)
T ss_dssp CCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-H
T ss_pred ceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-H
Confidence 999999976 78887765 22 24567788899988888875332 2233333444444444444 4
Q ss_pred hcCCCCCCCCCCCceEEEEEecCccccc--CCC----cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHH
Q 038416 299 KEIPCITCPVKPQGAMFVMVKLNVSMLE--DIG----DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLE 370 (387)
Q Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~ 370 (387)
..+|.+. . .+..|.++++.+...... ... ...++...++ ++||.+.|+ .+++||++ ..++++++
T Consensus 359 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----~~~iRi~~~~~~t~e~i~ 430 (448)
T 3dod_A 359 HALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-----GDVIAFLPPLASTAEELS 430 (448)
T ss_dssp TTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----TTEEEECCCTTCCHHHHH
T ss_pred hcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----CCEEEEECCCCCCHHHHH
Confidence 4454333 1 233466778777542110 000 0245666664 569999886 37999976 56899999
Q ss_pred HHHHHHHHHHHHhhh
Q 038416 371 DGLERIKAFCQRHAK 385 (387)
Q Consensus 371 ~~~~~l~~~~~~~~~ 385 (387)
+++++|+++++++.+
T Consensus 431 ~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 431 EMVAIMKQAIHEVTS 445 (448)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988764
No 165
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.96 E-value=1.9e-27 Score=219.78 Aligned_cols=315 Identities=10% Similarity=0.073 Sum_probs=224.5
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---cCCCCeE
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL---ARPGANI 100 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~g~~v 100 (387)
.++++.+.+++.+.+.... +.+.....++|+.++++++ . +++++++|+++|+..++.++ .++||+|
T Consensus 9 ~~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~V 77 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEI 77 (375)
T ss_dssp CCCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEE
T ss_pred CCCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEE
Confidence 3789999999999987532 3333467899999999993 2 38999999999999999999 8899999
Q ss_pred EEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc
Q 038416 101 LIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL 180 (387)
Q Consensus 101 l~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~ 180 (387)
+++.|+|+++...+. ..|.+++.++++++ + .+|++++++++++++++|++++| ||...+ +++|.++|+++
T Consensus 78 l~~~~~~~~~~~~~~--~~g~~~~~~~~~~~-~-~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~ 147 (375)
T 2fnu_A 78 ITTPISFVATANMLL--ESGYTPVFAGIKND-G-NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKH 147 (375)
T ss_dssp EECSSSCTHHHHHHH--HTTCEEEECCBCTT-S-SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHH
T ss_pred EECCCccHhHHHHHH--HCCCEEEEeccCCC-C-CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHc
Confidence 999999999999999 89999999988643 2 68999999999888888888877 999987 78889999999
Q ss_pred CcEEeecccccccccCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc-
Q 038416 181 GIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA- 257 (387)
Q Consensus 181 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (387)
|+++|+|++|+.+..... ..+..+. .+++.|+| |+++. | +|++++.+ ++++.+++.......
T Consensus 148 ~~~li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~------~~~~~~~~~~~~~~~~ 212 (375)
T 2fnu_A 148 SLSFLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTN------DSELHEKMKLFRSHGM 212 (375)
T ss_dssp TCEEEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEES------CHHHHHHHHHHTBTTE
T ss_pred CCEEEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeC------CHHHHHHHHHHHhcCC
Confidence 999999999986432211 1122111 27777888 99755 5 78888742 125666666543211
Q ss_pred ----------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CceEEE
Q 038416 258 ----------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-----QGAMFV 316 (387)
Q Consensus 258 ----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~g~~~ 316 (387)
...++....+... . ..++++..++.+++++++.+.|++++++.+. .+ ..++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~ 286 (375)
T 2fnu_A 213 LKKDFFEGEVKSIGHNFRLNEIQSALGLS--Q---LKKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLY 286 (375)
T ss_dssp EESSSSCEEESSCCCBCCCCHHHHHHHHH--H---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCE
T ss_pred ccccccccccccccccCCCCHHHHHHHHH--H---HHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEE
Confidence 1122222222111 1 2346677888889999999999998777743 33 123345
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc-------cC-------C-------CCeEEEEee--CChHhHHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT-------VG-------M-------KNWLRIAFA--AEPATLEDGL 373 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~~Ri~~~--~~~e~~~~~~ 373 (387)
++.++.... .+..++...| .++||.+..+.. |+ . .+++||+++ .+++++++++
T Consensus 287 ~~~~~~~~~---~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~ 362 (375)
T 2fnu_A 287 PILMHQKFF---TCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIA 362 (375)
T ss_dssp EEEECGGGG---GGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred EEEeCcccc---chHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHH
Confidence 666653110 0245566666 567999883211 11 1 167999996 4899999999
Q ss_pred HHHHHHHHHhh
Q 038416 374 ERIKAFCQRHA 384 (387)
Q Consensus 374 ~~l~~~~~~~~ 384 (387)
+.|+++++++.
T Consensus 363 ~~l~~~~~~~~ 373 (375)
T 2fnu_A 363 HSVLKTFESFK 373 (375)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999887653
No 166
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=2.8e-28 Score=232.25 Aligned_cols=337 Identities=14% Similarity=0.046 Sum_probs=228.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHHHHHHHHHhhcCCCCCCC--CCEEEcCChHHHHHHHHHhhcCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYS------PTLGVPSARRGIADYLNRDLPYKLSP--EDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
++++.+.+++.+.+.+....+|+ ......++++.+.+++.+.+|...+. .+|++++|+ +++..++.+++++
T Consensus 55 ~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~p 133 (483)
T 1rv3_A 55 FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEP 133 (483)
T ss_dssp CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCT
T ss_pred CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCC
Confidence 57999999999988764221232 22234677777777777777643211 237777777 8999989999999
Q ss_pred CCeEEEcCCCCcchHHHhh------ccCCCceeeeecc--CCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCH
Q 038416 97 GANILIPRPGYPLYEIHAA------GSNNNLEARHYDL--LPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~~------~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~ 167 (387)
||+|+++.+.|.++..... ....|..+..+++ ++ +++.+|+++|+++++ +++++|++ +++|++ ..++
T Consensus 134 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d- 209 (483)
T 1rv3_A 134 HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD- 209 (483)
T ss_dssp TCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC-
T ss_pred CCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC-
Confidence 9999999999887643221 0022322444443 43 356899999999997 78999988 888888 7776
Q ss_pred HHHHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccch--
Q 038416 168 QHLQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNS-- 244 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~-- 244 (387)
+++|.++|+++|+++|+|++|. ++.+.+....++. . ..+++.|+||++ .|+|.|++++++........
T Consensus 210 --l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g 280 (483)
T 1rv3_A 210 --YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTG 280 (483)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSCEEEEEECSBCC------
T ss_pred --HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCceEEEEcchhhhhccccC
Confidence 8899999999999999999987 4444343223332 1 227889999985 68888999998631100000
Q ss_pred -----hHHHHHHhhh-h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-ceEEE
Q 038416 245 -----GFVDSIKGCL-N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ-GAMFV 316 (387)
Q Consensus 245 -----~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~~ 316 (387)
++.+.+.... . ..++++.....++..++....+..+++..+++.++++.+.+.|+++ ++.++ .+. ...++
T Consensus 281 ~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~ 358 (483)
T 1rv3_A 281 KEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIV-TGGSDNHLI 358 (483)
T ss_dssp -CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEE
T ss_pred cchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEec-cCCCCCceE
Confidence 1333333221 1 2344555566666666665444567888899999999999999988 77744 332 34577
Q ss_pred EEecCcccccCCCcHHHHHHHHHHhcCeEEE----cCCccC-CCCeEEEEeeC--C----hHhHHHHHHHHHHHHHH
Q 038416 317 MVKLNVSMLEDIGDDLEFCLKLAKEESVIIL----PGRTVG-MKNWLRIAFAA--E----PATLEDGLERIKAFCQR 382 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~~Ri~~~~--~----~e~~~~~~~~l~~~~~~ 382 (387)
|+.+..... +..++ ..++++.||.+. ||..+. ..+++||+++. + +++++++++.|.++++.
T Consensus 359 ~v~~~~~g~----~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 359 LVDLRSKGT----DGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEEGGGGTC----CHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCC----CHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 777754211 34444 445578899999 876322 25789999953 4 89999999999998876
No 167
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.96 E-value=1.1e-28 Score=233.41 Aligned_cols=324 Identities=13% Similarity=0.075 Sum_probs=217.8
Q ss_pred CcHHHHHHHHHHhcCCCCC--CCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-------C
Q 038416 26 DSTVAEDAVVDALRTAHYN--CYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-------P 96 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~ 96 (387)
.+|.+.+++++++...... .+.......+|++.+++++ +.+.++|++++|+++|++.+++.+.+ +
T Consensus 92 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~------~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~ 165 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT------PAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLP 165 (457)
T ss_dssp TCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS------STTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 6899999999988753111 1111123345555555554 34567999999999999999998864 5
Q ss_pred C-CeEEEcCCCCcchHHHhhccCCC--------------ceeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeC-C
Q 038416 97 G-ANILIPRPGYPLYEIHAAGSNNN--------------LEARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIIN-P 157 (387)
Q Consensus 97 g-~~vl~~~p~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~-p 157 (387)
| +.|++.+++|+++..... ..+ .++..++.+.......|+++|+++++ +++++|++.. +
T Consensus 166 g~~~ii~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~ 243 (457)
T 3tfu_A 166 GKRRLMTWRGGYHGDTFLAM--SICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVV 243 (457)
T ss_dssp TCCEEEEETTCCCCSSHHHH--TTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSE
T ss_pred CCceEEEEcCCcCCccHHhh--cccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 5 589999999988665544 331 12233333222111237889998887 5566677666 6
Q ss_pred CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeC
Q 038416 158 GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSD 236 (387)
Q Consensus 158 ~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~ 236 (387)
+|++|..+ +++.+++|.++|++||+++|+||+|.+|...|.... +..+....+++ |+||.++.+.+|+||+++++
T Consensus 244 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a-~~~~~~~pdii---t~sK~l~gG~~~lG~v~~~~ 319 (457)
T 3tfu_A 244 QGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFA-ADHAGVSPDIM---CVGKALTGGYLSLAATLCTA 319 (457)
T ss_dssp ECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST-HHHHTCCCSEE---EECGGGGTTSSCCEEEEEEH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhH-hHhcCCCceEE---EEChhhhCCCcceEEEEEcH
Confidence 89999876 777799999999999999999999998876654321 22222222222 89998644337999999986
Q ss_pred CCCcccchhHHHHHHhh-----h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCC
Q 038416 237 PNGILQNSGFVDSIKGC-----L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI---PCITCP 307 (387)
Q Consensus 237 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~ 307 (387)
++++.+... . ..+++.++++++++.++|+...+ +...++++++.+++++.|+++ +.+..
T Consensus 320 --------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~- 387 (457)
T 3tfu_A 320 --------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTARALPAVTD- 387 (457)
T ss_dssp --------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEE-
T ss_pred --------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCeee-
Confidence 788877521 1 24567888898888888764322 234455566666666666654 33331
Q ss_pred CCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 308 VKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 308 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+..|.++++.++.. .+..++...++ ++||.+.|. .+++|+++ ..+++++++++++|+++++++..
T Consensus 388 -vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~~ 455 (457)
T 3tfu_A 388 -VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARLVGS 455 (457)
T ss_dssp -EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred -eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 233466778777542 13556777665 459999874 47899997 45899999999999999987653
No 168
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=2.2e-27 Score=221.04 Aligned_cols=280 Identities=19% Similarity=0.186 Sum_probs=198.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~~ 125 (387)
....++++.++++++ . ++.++++++++|+..++.+++++||+|+++.|+|+++...+ . ..|.++..
T Consensus 65 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~ 134 (398)
T 1gc0_A 65 PTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIG--EFGVKLRH 134 (398)
T ss_dssp HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGG--GGTCEEEE
T ss_pred hHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHH--HcCCEEEE
Confidence 456788888888883 2 35666666689999999999999999999999999876654 5 67888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+.. ++ .
T Consensus 135 ~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~ 199 (398)
T 1gc0_A 135 VDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E 199 (398)
T ss_dssp ECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h
Confidence 764 2789999999989999999999999999987 8999999999999999999999755421 22 1
Q ss_pred cCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHH-HHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVD-SIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
. +..+++.|++|.++.+|.|+ |++++++ +.++ .+..... .+.+.+++.++++...++. +.
T Consensus 200 ~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~ 263 (398)
T 1gc0_A 200 L---GADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LN 263 (398)
T ss_dssp G---TCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HH
T ss_pred h---CceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HH
Confidence 2 23488999999999999997 9998865 4444 4444332 3456777777777666654 34
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCC-------------CC---CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE
Q 038416 282 KIIGLLKETADICYERIKEIPCITCPV-------------KP---QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI 345 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (387)
.+.++..++++.+.+.|++++.+..+. .+ ..+.++.+.++. ..+....++.+.++.
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~ 335 (398)
T 1gc0_A 264 LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLF 335 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCc
Confidence 556666677777777776654322110 11 234455556642 234455666777887
Q ss_pred EEc---CCcc----------------------CC-CCeEEEEeeC--ChHhHHHHHHHHHH
Q 038416 346 ILP---GRTV----------------------GM-KNWLRIAFAA--EPATLEDGLERIKA 378 (387)
Q Consensus 346 v~~---g~~~----------------------~~-~~~~Ri~~~~--~~e~~~~~~~~l~~ 378 (387)
+.. |+.. +. ++++|+|++. ++++++.+.+.|++
T Consensus 336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 336 SRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp EECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 765 3210 11 4799999976 34566666665544
No 169
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=1.2e-26 Score=217.18 Aligned_cols=312 Identities=14% Similarity=0.125 Sum_probs=215.1
Q ss_pred CCCCCCCCcHHHHHHHHHHhcCCCCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 19 LGVSLLSDSTVAEDAVVDALRTAHYNCYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
+...+++.++.+.+++. ... ...|+.. ....++|+.++++++ .+++++++|+++|+..++.+++++
T Consensus 27 s~~~~~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~ 94 (412)
T 2cb1_A 27 VAAYGFKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRP 94 (412)
T ss_dssp CSBCCCSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCT
T ss_pred cceeecCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCC
Confidence 33457888888877764 222 2345542 457888999999883 348999999999999999999999
Q ss_pred CCeEEEcCCCCcchHHH----hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 97 GANILIPRPGYPLYEIH----AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
||+|+++.|+|.++... ++ ..|.++..++. |+++|++++++++++|++++|+||||.+++ +++
T Consensus 95 gd~vi~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~ 161 (412)
T 2cb1_A 95 GDEVVAAKGLFGQTIGLFGQVLS--LMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEA 161 (412)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTT--TTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHH
T ss_pred CCEEEEeCCCchhHHHHHHHHHH--HcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHH
Confidence 99999999999875543 45 67888888864 389999999989999999999999999987 899
Q ss_pred HHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCc------cc----
Q 038416 173 IARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGI------LQ---- 242 (387)
Q Consensus 173 l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~------~~---- 242 (387)
|.++|+++|+++|+|++|+.+.+.. .+. .. +..+++.|++|+++.+|.|+|++++.+.... +.
T Consensus 162 i~~l~~~~~~~li~D~~~~~~~~~~---~~~-~~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T 2cb1_A 162 LATLAEEAGVALVVDNTFGAAGALC---RPL-AW---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDL 234 (412)
T ss_dssp HHHHHHHHTCEEEEECGGGTTTTSC---CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC--
T ss_pred HHHHHHHcCCEEEEECCCccccccC---Ccc-cc---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccc
Confidence 9999999999999999999752211 121 12 3458999999999999999999988753210 00
Q ss_pred ----------chhHHHHHHhhh-h-ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038416 243 ----------NSGFVDSIKGCL-N-AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP 310 (387)
Q Consensus 243 ----------~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 310 (387)
..++.+.++... . .+...++...+.+...++. +..+.++..++.+.+.+.|.+.+++..+..|
T Consensus 235 ~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p 309 (412)
T 2cb1_A 235 KGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYP 309 (412)
T ss_dssp -----HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECT
T ss_pred cccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 003444444432 2 2223344444433333432 3455566677888888999888777633223
Q ss_pred ----------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCC---------ccC------------
Q 038416 311 ----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGR---------TVG------------ 353 (387)
Q Consensus 311 ----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~~------------ 353 (387)
..+.++.+.+ . +. +.+..++.+.||.+ +++ .+.
T Consensus 310 ~~~~~p~~~~~~~~~~~~~~iv~~~~-~-------~~-~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~ 379 (412)
T 2cb1_A 310 GLPEDPAHRNARKYLASGGPILTLDL-G-------DL-ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEAR 379 (412)
T ss_dssp TSTTCTTHHHHHHHCSSSCSEEEEEC-S-------SH-HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHH
T ss_pred CCCCCccHHHHHHhCCCCceEEEEEe-C-------CH-HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHH
Confidence 2344555555 2 22 33445567789998 763 221
Q ss_pred ----C-CCeEEEEeeC--ChHhHHHHHHHHH
Q 038416 354 ----M-KNWLRIAFAA--EPATLEDGLERIK 377 (387)
Q Consensus 354 ----~-~~~~Ri~~~~--~~e~~~~~~~~l~ 377 (387)
. ++.+|+|++. ++++++.+.+.|+
T Consensus 380 ~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 380 LQAGVTPGLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp HHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred HhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0 4789999975 4567777666664
No 170
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=3.1e-27 Score=223.74 Aligned_cols=338 Identities=13% Similarity=-0.010 Sum_probs=234.1
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC---CCEEEcCChHHHHHHHHHhhcC-----
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP---EDVYLTLGCSQAIEISLSVLAR----- 95 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~---~~i~~~~g~~~a~~~~~~~l~~----- 95 (387)
.+.++.+.+++.+++... ..+|....+..++++.+.+++.+.+|.+.+. ..+++|+|+++++..++.++..
T Consensus 52 ~~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 356688999999888643 3355555577788888888888877744321 2489999999999999988753
Q ss_pred ---CC-----CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 96 ---PG-----ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 96 ---~g-----~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
+| ++|+++. +|..+...+. ..|++++.+++++ +++.+|+++|++++++++++|++++|+||||.+.+
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~--~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~- 205 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFAR--YWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF- 205 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHH--HTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC-
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHH--HcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC-
Confidence 55 5899999 9999999999 9999999999864 35789999999999989999999999999999966
Q ss_pred HHHHHHHHHHHhc------CcEEeeccccccccc---CCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 168 QHLQKIARTARNL------GIIVIADEVYNHLAF---GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 168 ~~~~~l~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
+++|.++|+++ |+++++|++|+.+.. .......+ ....-.+++.|++|+ ++++.++|+++++++.
T Consensus 206 --l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~ 279 (452)
T 2dgk_A 206 --PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHKF-GLAPLGCGWVIWRDEE 279 (452)
T ss_dssp --HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGG
T ss_pred --HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECcccc-cCCCCCeEEEEEcCHH
Confidence 78888888885 999999999998643 22111111 111223567789995 7888999999997532
Q ss_pred CcccchhHHHHHHh---hh-----h--ccCCc---chHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 239 GILQNSGFVDSIKG---CL-----N--AASHP---VTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 239 ~~~~~~~~~~~~~~---~~-----~--~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
.+ .+.+.. +. . ..++. ....++++...+ ..+.+.++.++..++++++.+.|++++++.
T Consensus 280 ~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 350 (452)
T 2dgk_A 280 AL------PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYE 350 (452)
T ss_dssp GS------CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred HH------HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 11 121111 00 0 01111 222333333333 346678889999999999999999987787
Q ss_pred CCCCC----CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCC---ccCCCCeEEEEee--CChHhHHHHHHHH
Q 038416 306 CPVKP----QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGR---TVGMKNWLRIAFA--AEPATLEDGLERI 376 (387)
Q Consensus 306 ~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---~~~~~~~~Ri~~~--~~~e~~~~~~~~l 376 (387)
++ .| ....++.++++...... .+..++...| .++||.+.... ......++|++++ .++++++.+++.|
T Consensus 351 ~~-~~~~~~~~~~~v~f~~~~~~~~~-~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l 427 (452)
T 2dgk_A 351 FI-CTGRPDEGIPAVCFKLKDGEDPG-YTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDY 427 (452)
T ss_dssp EE-EECCTTTBSSEEEEEECTTCCCS-CCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred Ee-cCCCCCCCeEEEEEEecCccccc-CCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHH
Confidence 54 33 23445666665310000 1235676666 45698643211 1112458999995 4689999999999
Q ss_pred HHHHHHhhh
Q 038416 377 KAFCQRHAK 385 (387)
Q Consensus 377 ~~~~~~~~~ 385 (387)
+++++++++
T Consensus 428 ~~~~~~~~~ 436 (452)
T 2dgk_A 428 KASLKYLSD 436 (452)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998877654
No 171
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=4.5e-27 Score=218.19 Aligned_cols=285 Identities=18% Similarity=0.180 Sum_probs=201.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
.+..++|+.+++++. .+ +.+++++ +++++..++.++.++||+|+++.|+|++... .++ ..|.++..
T Consensus 52 ~~~~~l~~~la~~~~------~~-~~i~~~s-Gt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~--~~g~~~~~ 121 (386)
T 1cs1_A 52 PTRDVVQRALAELEG------GA-GAVLTNT-GMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAK--RGCYRVLF 121 (386)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEESS-HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHT--TTSCEEEE
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEeCC-HHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHH--hcCCEEEE
Confidence 456889999999984 22 5566655 4999999999999999999999999987443 346 78888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.+ |++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+. .++ .
T Consensus 122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~ 186 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-A 186 (386)
T ss_dssp ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-G
T ss_pred eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c
Confidence 8752 789999999889999999999999999987 889999999999999999999976543 122 2
Q ss_pred cCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+ +..+++.|++|+++.+|.++ ||+++++ +++++.+..... .+.+.+++.++++...++. +..+
T Consensus 187 ~---~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 251 (386)
T 1cs1_A 187 L---GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPR 251 (386)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHH
T ss_pred c---CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHH
Confidence 2 34588999999998899886 9999864 246677765543 3345667776666555543 4555
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKP----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
.+.+..+++.+.+.+++++.+.....+ ..+.++.+.++. . .+.+...+.+.||.+.
T Consensus 252 ~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~l~~~gi~~~ 323 (386)
T 1cs1_A 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------D-EQTLRRFLGGLSLFTL 323 (386)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------C-HHHHHHHHHTCSSSEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------C-HHHHHHHHHhCCcceE
Confidence 666777777887777766433211011 124555556642 2 2334445577899887
Q ss_pred cCCc---------------c----------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 348 PGRT---------------V----------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 348 ~g~~---------------~----------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+... + +. ++++|++++. ++.++.+++|.+++++..
T Consensus 324 ~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp BSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred cccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 4211 0 11 4799999976 455566666666666554
No 172
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=1.3e-27 Score=222.02 Aligned_cols=284 Identities=21% Similarity=0.183 Sum_probs=206.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~~ 125 (387)
....++|+.++++++ .+++++++|+++|+..++.+++++||+|+++.|+|+++...+ . ..|.++..
T Consensus 66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~--~~g~~~~~ 135 (392)
T 3qhx_A 66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFT--GWNVEYTP 135 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGG--GGTCEEEE
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHH--hcCcEEEE
Confidence 345788888888872 247899999999999999999999999999999998776555 5 67888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.+ |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.. . .++ .
T Consensus 136 v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~---~~~-~ 200 (392)
T 3qhx_A 136 VALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-Q---QPL-S 200 (392)
T ss_dssp ECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-C---CGG-G
T ss_pred eCCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-C---ChH-H
Confidence 8752 799999999999999999999999999977 88999999999999999999985321 1 111 2
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+. ..+++.|++|.++.+| .++|++++++ +++.+.+..... .+..++++.++++...++. +..+
T Consensus 201 ~~---~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~ 265 (392)
T 3qhx_A 201 LG---ADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLR 265 (392)
T ss_dssp GT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred hC---CcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHH
Confidence 22 3488999999998877 7899999864 257777766543 4566777777777666654 4555
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
.+++.++++.+.+.|++.|.+..+..|. .|.++++.++... .....++.. ++..++.+.
T Consensus 266 ~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s 340 (392)
T 3qhx_A 266 MQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAES 340 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCC
Confidence 6777778888888888776553332221 2557777775310 123344443 355567766
Q ss_pred cCCccC--------------------CCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 348 PGRTVG--------------------MKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 348 ~g~~~~--------------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
.|+.+. .++.+|+|++. |+.++.++.|.+++
T Consensus 341 ~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 341 LGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp CCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 665421 14679999986 45555666665554
No 173
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.96 E-value=4.7e-28 Score=230.26 Aligned_cols=329 Identities=15% Similarity=0.109 Sum_probs=221.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+|+++++.... .+....+..+.+.++++++.+..+ .+.++|++++|+++|+..+++.+.+ .+
T Consensus 71 ~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~ 146 (476)
T 3i5t_A 71 GRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQK 146 (476)
T ss_dssp CCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999987632 122223556788888888887654 3457999999999999999999863 24
Q ss_pred CeEEEcCCCCcchHHHhhccCCCce-------------eeeeccC--CCCCccCC--------hhhHHHhhc----cCce
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLE-------------ARHYDLL--PEKRWEVD--------LDGVEALAD----ENTV 150 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~-------------~~~~~~~--~~~~~~~~--------~~~l~~~~~----~~~~ 150 (387)
+.|++.+|+|+++...+. ..+.. +..++.+ ... +..+ +++|++.++ +++.
T Consensus 147 ~~vi~~~~~yHg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~le~~i~~~~~~~~a 223 (476)
T 3i5t_A 147 KRIIVRYDGYHGSTALTA--ACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDLVQEFEDRIESLGPDTIA 223 (476)
T ss_dssp CEEEEETTCCCCSSHHHH--HTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred CEEEEEcCCcCcCChhhc--cccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 799999999998765444 22221 1122211 111 1122 678888775 3455
Q ss_pred EEEEeCCCCCccc-cCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcccc-ccCCCccEEEEecCcccccccc-c
Q 038416 151 AIVIINPGNPCGN-VFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMG-VFGSIVPVITLGSISKRWIVPG-W 227 (387)
Q Consensus 151 ~v~l~~p~nptG~-~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~s~sK~~~~~g-~ 227 (387)
+|++..++|++|. .++.+++++|.++|++||+++|+||+|.+|...|..+. +. .+....+ +.++||+++ .| +
T Consensus 224 avi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~-~~~~~~v~pd---i~t~sK~l~-~G~~ 298 (476)
T 3i5t_A 224 AFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFA-SEKVFGVVPD---IITFAKGVT-SGYV 298 (476)
T ss_dssp EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCH-HHHTTCCCCS---EEEECGGGG-TTSS
T ss_pred EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCcee-eecccCCCcc---hhhhhhhhc-CCCc
Confidence 5666556778886 78888999999999999999999999999876664321 12 2222122 236889976 48 9
Q ss_pred ceEEEEeeCCCCcccchhHHHHHHhh-------h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 228 RLGWLVTSDPNGILQNSGFVDSIKGC-------L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 228 r~G~i~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
|+|++++++ ++++.+... . ..+++.++++++++.++|+...+ +...++++++.+++++.|+
T Consensus 299 plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~ 367 (476)
T 3i5t_A 299 PLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALA 367 (476)
T ss_dssp CCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 999999976 777777653 1 24667889999998888875332 2345556666666666666
Q ss_pred cC---CCCCCCCCCCceEEEEEecCcccccC--CC----cHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHh
Q 038416 300 EI---PCITCPVKPQGAMFVMVKLNVSMLED--IG----DDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPAT 368 (387)
Q Consensus 300 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~--~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~ 368 (387)
.+ |.+. . .+..|.++++.+....... +. ....+...+ .++||.+.|. .+++||++ ..++++
T Consensus 368 ~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~-----g~~iRi~p~l~~t~e~ 439 (476)
T 3i5t_A 368 SLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPL-----GDLCVISPPLIISRAQ 439 (476)
T ss_dssp TTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEE-----TTEEEECCCTTCCHHH
T ss_pred HHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEec-----CCEEEEECCCCCCHHH
Confidence 54 3333 1 2334556677664321000 00 023455555 5569999884 28999995 579999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 038416 369 LEDGLERIKAFCQRHAK 385 (387)
Q Consensus 369 ~~~~~~~l~~~~~~~~~ 385 (387)
+++++++|+++++++.+
T Consensus 440 i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 440 IDEMVAIMRQAITEVSA 456 (476)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987664
No 174
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=5e-27 Score=220.70 Aligned_cols=323 Identities=15% Similarity=0.091 Sum_probs=205.4
Q ss_pred CcHHHHHHHHHHhcCCCCCCCC------CCCCcHHHH----HHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYS------PTLGVPSAR----RGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~lr----~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 95 (387)
.++.+.+++.+.+.+....+|+ .......++ +.+++++ + .+. ..++++|+++++..++.++++
T Consensus 44 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~----~--~~~-~~v~~~~Gs~a~~~al~~~~~ 116 (425)
T 3ecd_A 44 VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF----N--AGH-ANVQPHSGAQANGAVMLALAK 116 (425)
T ss_dssp CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH----T--CSE-EECCCSSHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh----C--CCC-ceeecCchHHHHHHHHHHccC
Confidence 3999999999988543211222 111111222 3344444 2 222 234588899999999999999
Q ss_pred CCCeEEEcCCCCcc---hHHHhhccCCCc--eeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHH
Q 038416 96 PGANILIPRPGYPL---YEIHAAGSNNNL--EARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 96 ~g~~vl~~~p~~~~---~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~ 169 (387)
+||+|+++.|+|++ +..... ..|. .+..++.++ +++.+|+++|+++++ +++++|++++|+||+ . .+
T Consensus 117 ~gd~Vi~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~---~~ 188 (425)
T 3ecd_A 117 PGDTVLGMSLDAGGHLTHGAKPA--LSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSAYPR--K---LD 188 (425)
T ss_dssp TTCEEEEECC--------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSCCCS--C---CC
T ss_pred CCCEEEEcccccccceecchhhh--hcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEccccCCC--c---CC
Confidence 99999999999987 222222 3444 444555432 346899999999986 588999999999864 3 33
Q ss_pred HHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH
Q 038416 170 LQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
+++|.++|++||+++|+|++|. ++.+.+.....+.. . .+++.|+||++ +|.|.||+++++ +++.+
T Consensus 189 l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~---di~~~s~sK~l--~g~~~g~~~~~~-------~~~~~ 254 (425)
T 3ecd_A 189 FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--A---HVVTSTTHKTL--RGPRGGFVLTND-------EEIAK 254 (425)
T ss_dssp HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--C---SEEEEESSGGG--CCCSCEEEEESC-------HHHHH
T ss_pred HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--C---cEEEecCCccc--CCCCcEEEEeCC-------HHHHH
Confidence 7899999999999999999965 44444433333222 1 27899999985 678899999874 24666
Q ss_pred HHHhhhhc--cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCccccc
Q 038416 249 SIKGCLNA--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 249 ~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
.+...... ..+++.....++..++....+..+++..+++.++++.+.+.|++. ++.++..+..++++|+.++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-- 331 (425)
T 3ecd_A 255 KINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKG-- 331 (425)
T ss_dssp HHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--
T ss_pred HHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCC--
Confidence 66554321 224444444544444443333557788888999999999999886 6764422346778888775321
Q ss_pred CCCcHHHHHHHHHHhcCeEEE----cCCccC--CCCeEEEEee------CChHhHHHHHHHHHHHHHHh
Q 038416 327 DIGDDLEFCLKLAKEESVIIL----PGRTVG--MKNWLRIAFA------AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~----~g~~~~--~~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~~ 383 (387)
.+. +.+...++++||.+. ||..+. ..+++|+++. .++++++++++.|++++++.
T Consensus 332 --~~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 332 --LKG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp --CCH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 133 444555577899999 443211 2468999962 24899999999999998775
No 175
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=3e-27 Score=220.90 Aligned_cols=290 Identities=17% Similarity=0.106 Sum_probs=200.6
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
....+|++.++++++ .+..++++++++|+..++.+++++||+|+++.|+|+++.. .+. ..|.++..
T Consensus 82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~--~~G~~~~~ 151 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLP--SFGIEVRF 151 (430)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHH--HTTCEEEE
T ss_pred HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH--HcCCEEEE
Confidence 456788999998883 2446777778899999999999999999999999998776 566 78999988
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++.+ |++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+ ..+. .
T Consensus 152 v~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~~~~-~ 216 (430)
T 3ri6_A 152 VDVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----LEAK-R 216 (430)
T ss_dssp ECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----CCGG-G
T ss_pred eCCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChH-H
Confidence 8753 799999999999999999999999999987 77889999999999999999985332 1111 1
Q ss_pred cCCCccEEEEecCcccccccccceEEEEe-eCCCCcc------------cchhHHHHHHhh--hhccCCcchHHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVT-SDPNGIL------------QNSGFVDSIKGC--LNAASHPVTFIQAAVPR 270 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~-~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 270 (387)
.. ..+++.|++|.++.+|..+|.+++ ++...+. ....++++.+.. .......++...+.+..
T Consensus 217 ~g---~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~ 293 (430)
T 3ri6_A 217 LG---VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSL 293 (430)
T ss_dssp GT---CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH
T ss_pred cC---CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 22 248899999998877655555554 2221110 001223333322 12333444444333332
Q ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHH
Q 038416 271 IVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEF 334 (387)
Q Consensus 271 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~ 334 (387)
.+ +.+..+.++..++++.+.+.|++.|.+..+..|. +|+++|+.++.. .+...+
T Consensus 294 ~l-----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~~~~ 363 (430)
T 3ri6_A 294 GL-----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EASYRF 363 (430)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHHHHH
T ss_pred hh-----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHHHHH
Confidence 22 3466677888889999999999888777555554 444888888621 123344
Q ss_pred HHHHHHhcCeEEEcCCccC-----------------------CCCeEEEEeeCChHhHHHHHHHHHHHH
Q 038416 335 CLKLAKEESVIILPGRTVG-----------------------MKNWLRIAFAAEPATLEDGLERIKAFC 380 (387)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~-----------------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~ 380 (387)
+..+ +-.++.+..|..+. .++++|+|++. |+.+++++.|++++
T Consensus 364 ~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 364 MDAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp HHHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred HHhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 4443 44455566665443 14689999987 56666667766665
No 176
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.96 E-value=4.1e-28 Score=228.76 Aligned_cols=336 Identities=14% Similarity=0.064 Sum_probs=216.0
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+.|.+....++ .+|.+.+++.+++.......|+. ....++++.+++++ + +.++|++++|+++|+..
T Consensus 57 ~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~---~~~~v~~~~sgseA~~~ 127 (434)
T 2epj_A 57 RIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAPG-EAEVLLAEKILGYV----K---RGGMIRFVNSGTEATMT 127 (434)
T ss_dssp EEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSCC-HHHHHHHHHHHHHH----C---TTCEEEEESSHHHHHHH
T ss_pred EEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHhC----C---CCCEEEEeCCHHHHHHH
Confidence 3455555443223233 78999999999998642223322 12344455555444 2 46899999999999999
Q ss_pred HHHh---hcCCCCeEEEcCCCCcchHHHhhcc------------CCCc------eeeeeccCCCCCccCChhhHHHhhcc
Q 038416 89 SLSV---LARPGANILIPRPGYPLYEIHAAGS------------NNNL------EARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 89 ~~~~---l~~~g~~vl~~~p~~~~~~~~~~~~------------~~g~------~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
+++. +. +++.|++..|+|+++...+... ..|. .+..++. .|+++|+++++.
T Consensus 128 al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~ 199 (434)
T 2epj_A 128 AIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAE 199 (434)
T ss_dssp HHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHH
T ss_pred HHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHh
Confidence 9987 44 4578888899998754432200 1122 1223322 278999998863
Q ss_pred --CceEEEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc
Q 038416 148 --NTVAIVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 148 --~~~~v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
....+++++| +++||.++ +.+++++|.++|++||+++|+||+|+++. .+.. ..+..+....+ +.|+||.++
T Consensus 200 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~-~g~~-~~~~~~~~~~d---i~s~sK~l~ 274 (434)
T 2epj_A 200 YGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFR-LGLE-GAQGYFNIEGD---IIVLGKIIG 274 (434)
T ss_dssp HGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTT-SSTT-HHHHHHTCCCS---EEEEEGGGG
T ss_pred CCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhcee-CCcc-hhhHHhCCCCC---eeeecchhc
Confidence 2344555666 56799866 69999999999999999999999999873 3321 11111111111 348999987
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
. |+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++++.|+
T Consensus 275 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~ 342 (434)
T 2epj_A 275 G-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAAS 342 (434)
T ss_dssp T-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHH
T ss_pred C-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 6 89999999975 666665541 123456788888888877765322 3455666667777777666
Q ss_pred cCC---CCCCCCCCCceEEEEEecCcccccC--------CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHh
Q 038416 300 EIP---CITCPVKPQGAMFVMVKLNVSMLED--------IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPAT 368 (387)
Q Consensus 300 ~~~---~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~ 368 (387)
++. ++... .+..|.++|+.++...... .....++...+ .++||.+.|+.. ..+|+++..++++
T Consensus 343 ~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t~e~ 416 (434)
T 2epj_A 343 EVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEM-LRRGVFIAPSNL----EAVFTGLPHQGEA 416 (434)
T ss_dssp HHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCSHHH
T ss_pred HHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHH-HHCCeEEeccCC----CcEEEeccCCHHH
Confidence 531 23211 2445678888875310000 01234566666 467999998752 4577777789999
Q ss_pred HHHHHHHHHHHHHHhh
Q 038416 369 LEDGLERIKAFCQRHA 384 (387)
Q Consensus 369 ~~~~~~~l~~~~~~~~ 384 (387)
+++++++|+++++++.
T Consensus 417 i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 417 LEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988764
No 177
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=6.4e-27 Score=219.28 Aligned_cols=284 Identities=15% Similarity=0.102 Sum_probs=202.1
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeeee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARHY 126 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~~ 126 (387)
...++|+.++++++ .. +.++++++++|+..++.+++++||+|+++.+.|+++... +. ..|.++..+
T Consensus 115 ~~~~l~~~lA~l~g------~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~--~~G~~v~~v 184 (445)
T 1qgn_A 115 TTVVLEEKISALEG------AE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILP--KMGITATVI 184 (445)
T ss_dssp HHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGG--GGTCEEEEE
T ss_pred HHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH--HcCCEEEEe
Confidence 45688999999883 22 444445556999999999999999999999999986653 55 678898888
Q ss_pred ccCCCCCccCChhhHHHhhccCc-eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 127 DLLPEKRWEVDLDGVEALADENT-VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~-~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
+.+ |++++++++++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..++ .
T Consensus 185 ~~~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~----~~~~-~ 249 (445)
T 1qgn_A 185 DPA-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKAL-A 249 (445)
T ss_dssp CSS-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCTT-T
T ss_pred CCC-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCcc-c
Confidence 752 7999999999899 99999999999999987 78899999999999999999985432 1121 2
Q ss_pred cCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+. ..+++.|++|.++..| .++|++++++ ++++.+..... .+...+++..+.+...++. +..+
T Consensus 250 ~g---~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r 313 (445)
T 1qgn_A 250 LG---ADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLR 313 (445)
T ss_dssp TT---CSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHH
T ss_pred cC---CEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHH
Confidence 22 3488999999987655 4799999875 67777765543 3344555555555444443 4555
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKP----------------QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
.+++.++++.+.+.|+++|++..+..| ..+.++++.++.. ..+...++..+ +..++.++
T Consensus 314 ~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~----~~~~~~~l~~l-~~~~i~~s 388 (445)
T 1qgn_A 314 VQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD----LLTTAKFVDAL-KIPYIAPS 388 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC----HHHHHHHHHHC-SSSEECSC
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC----HHHHHHHHHhC-CCceEecc
Confidence 666777788888899888766323233 1456777777531 00123344432 33366666
Q ss_pred cCCccC----------------------C-CCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 348 PGRTVG----------------------M-KNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 348 ~g~~~~----------------------~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.|+.+. . ++.+|+|++. |+++.+++.|++++++
T Consensus 389 ~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 389 FGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp CCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 665431 1 3689999985 6899999999988864
No 178
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=7.7e-27 Score=216.63 Aligned_cols=281 Identities=17% Similarity=0.134 Sum_probs=201.3
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~ 125 (387)
....++++.++++++ . +++++++++++|+..++.+++++||+|+++.|+|+++... ++ ..|.++..
T Consensus 59 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~--~~g~~~~~ 128 (389)
T 3acz_A 59 PTVEQFEEMVCSIEG------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLP--RFGIEVDL 128 (389)
T ss_dssp HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred hHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH--HcCCEEEE
Confidence 456789999999883 2 3677777788999999999999999999999999986555 46 78999988
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+. .++.
T Consensus 129 v~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~- 193 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE- 193 (389)
T ss_dssp ECT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-
Confidence 875 3789999999989999999999999999987 889999999999999999999875431 1221
Q ss_pred cCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
+ +..+++.|++|.++.+|.|+ ||+++++ +++++.++.... .+.+.++..++++...++. +..+
T Consensus 194 ~---~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r 258 (389)
T 3acz_A 194 L---GADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIR 258 (389)
T ss_dssp T---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred c---CCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHH
Confidence 2 34588999999999999998 9999863 146666665543 3455666666666666653 3344
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCC----------------CCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE
Q 038416 284 IGLLKETADICYERIKEIPCITCPVK----------------PQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL 347 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (387)
.++..++++.+.+.+++++.+..+.. ...|.++.+.++ . .+....++.+.|+.+.
T Consensus 259 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~ 329 (389)
T 3acz_A 259 MQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTL 329 (389)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEE
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEE
Confidence 45555666666666665432111101 112445566654 2 2344556677888877
Q ss_pred c---C------Ccc----------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 348 P---G------RTV----------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 348 ~---g------~~~----------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
+ | ..+ +. ++++|+|++.. +.+++++.|.++++
T Consensus 330 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 330 AVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp BSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 6 4 211 11 47899999874 67777777777764
No 179
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.96 E-value=1e-27 Score=227.24 Aligned_cols=332 Identities=15% Similarity=0.096 Sum_probs=211.8
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+.|.+..+.++ .++.+.+++.+++.... .|+ ...++++.+++++.+.++ +.++|++++|+++|+..
T Consensus 58 ~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~~ 128 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTLL 128 (453)
T ss_dssp EEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHHH
T ss_pred EEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHHH
Confidence 3556666544333344 78999999999987632 222 346889999999988664 56899999999999999
Q ss_pred HHHh---hcCCCCeEEEcCCCCcchHHHhhccC-----------CCce------eeeeccCCCCCccCChhhHHHhhcc-
Q 038416 89 SLSV---LARPGANILIPRPGYPLYEIHAAGSN-----------NNLE------ARHYDLLPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 89 ~~~~---l~~~g~~vl~~~p~~~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~- 147 (387)
++++ +.++ +.|++.+|+|+++...+. . .|.. +..++. .|+++|+++++.
T Consensus 129 al~~ar~~~~~-~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~ 198 (453)
T 2cy8_A 129 ALRVARAFTGR-RMILRFEGHYHGWHDFSA--SGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH 198 (453)
T ss_dssp HHHHHHHHHCC-CEEEEECC------------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHhhCC-CEEEEEcCCcCCCchhhH--hhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence 9998 5554 688888999987654332 1 1221 122221 378999998863
Q ss_pred -CceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccc
Q 038416 148 -NTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIV 224 (387)
Q Consensus 148 -~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~ 224 (387)
....+++++| +|+||.+ .+.+++++|.++|++||+++|+||+|+++ ..+.. ..+..+....+ +.|+||.++.
T Consensus 199 ~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~ 273 (453)
T 2cy8_A 199 GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPD---LTCLAKASAG 273 (453)
T ss_dssp GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCS---EEEEEGGGGT
T ss_pred CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCc---EEEEChhhhC
Confidence 2334455666 5679976 47999999999999999999999999987 43421 11111221112 3489999874
Q ss_pred cccceEEEEeeCCCCcccchhHHHHHHh---h---hhccCCcchHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHH
Q 038416 225 PGWRLGWLVTSDPNGILQNSGFVDSIKG---C---LNAASHPVTFIQAAVPRIVDE-TNEAFFAKIIGLLKETADICYER 297 (387)
Q Consensus 225 ~g~r~G~i~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 297 (387)
|+|+||+++++ ++++.+.. . ...+++++++++.++.++++. . . ++..++++++++++++.
T Consensus 274 -G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~ 340 (453)
T 2cy8_A 274 -GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREA 340 (453)
T ss_dssp -TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHH
T ss_pred -CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHH
Confidence 89999999975 56665544 1 123456788888888777764 3 1 33445666666666666
Q ss_pred hhcCC---CCCCCCCCCceEEEEEecCc-----c----ccc-----CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEE
Q 038416 298 IKEIP---CITCPVKPQGAMFVMVKLNV-----S----MLE-----DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRI 360 (387)
Q Consensus 298 l~~~~---~~~~~~~~~~g~~~~~~~~~-----~----~~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri 360 (387)
|+++. ++... .+..|.++|+.++. . ... ......++...++ ++||.+.|+ +.+|+
T Consensus 341 L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~l 412 (453)
T 2cy8_A 341 MNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVFL 412 (453)
T ss_dssp HHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEEC
T ss_pred HHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEEe
Confidence 65431 22211 24456688888763 1 000 0001345666665 569999653 24777
Q ss_pred EeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 361 AFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 361 ~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
++..+++++++++++|+++++++..
T Consensus 413 ~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 413 SAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHHHHHHHHHHHHh
Confidence 7678999999999999999987643
No 180
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=4.4e-28 Score=230.56 Aligned_cols=296 Identities=12% Similarity=0.090 Sum_probs=211.1
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCC---eEEEcCCCCcch----HHHhhccCCCcee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGA---NILIPRPGYPLY----EIHAAGSNNNLEA 123 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~---~vl~~~p~~~~~----~~~~~~~~~g~~~ 123 (387)
...++++.+++++ +.++++|++|+|+++++..++.++.++|+ +|+++.|+|++. ...++ ..|.++
T Consensus 112 ~~~~l~~~la~~~------g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~--~~G~~~ 183 (465)
T 3e9k_A 112 GDESIVGLMKDIV------GANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQ--LHGLNI 183 (465)
T ss_dssp TTHHHHGGGHHHH------TCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHH--HTTCCH
T ss_pred hHHHHHHHHHHHc------CCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHH--HcCCcc
Confidence 3467888888887 45678999999999999999999987665 499999999874 33566 678876
Q ss_pred ee--eccC-CCCCccCChhhHHHhhc---cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCC
Q 038416 124 RH--YDLL-PEKRWEVDLDGVEALAD---ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGS 197 (387)
Q Consensus 124 ~~--~~~~-~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~ 197 (387)
.. +.+. ..+++.+|+++++++++ +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. +
T Consensus 184 ~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g 256 (465)
T 3e9k_A 184 EESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----G 256 (465)
T ss_dssp HHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----T
T ss_pred eeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----C
Confidence 42 1221 23456789999999996 67899999999999999988 78888999999999999999985 2
Q ss_pred CCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh------------------------
Q 038416 198 TPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC------------------------ 253 (387)
Q Consensus 198 ~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~------------------------ 253 (387)
.....+..... .++++|++|.+..+..++|++++++ ++.+.+...
T Consensus 257 ~~~~~~~~~~~---D~~~~s~~K~l~~gp~~~g~l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 325 (465)
T 3e9k_A 257 NVELYLHDWGV---DFACWCSYKYLNAGAGGIAGAFIHE--------KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPG 325 (465)
T ss_dssp TSCCCHHHHTC---CEEEECSSSTTCCCTTCCCEEEECG--------GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSS
T ss_pred CcCCchhhcCC---CEEEECcccccccCCCceEEEEEcH--------HHHhhcCCcccCccCCCCCcccccCCCcCcCCC
Confidence 22222323333 3888999999732223578988865 222211100
Q ss_pred --hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----------CCCCCCCCCC----ceEEEE
Q 038416 254 --LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----------PCITCPVKPQ----GAMFVM 317 (387)
Q Consensus 254 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~----~g~~~~ 317 (387)
....++++.....++.++++...+..+++..++..++++++.+.|+++ +++.++ .|. .|.+++
T Consensus 326 ~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~ 404 (465)
T 3e9k_A 326 VCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLT 404 (465)
T ss_dssp GGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEE
T ss_pred hHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEE
Confidence 001125666777777777765444457888889999999999999874 677744 443 266777
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe-e--CChHhHHHHHHHHHHHHHHhhh
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF-A--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~-~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
+.++. +..++...+ .++||.+.. ..++++|+++ . ++.++++++++.|++++++...
T Consensus 405 ~~~~~-------~~~~l~~~L-~~~Gi~v~~----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~~ 463 (465)
T 3e9k_A 405 ITFSV-------PNKDVFQEL-EKRGVVCDK----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAET 463 (465)
T ss_dssp EEECC-------TTCCHHHHH-HTTTEECEE----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC---
T ss_pred EEecC-------CHHHHHHHH-HHCCEEEec----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhccc
Confidence 77752 234566666 456998863 2368999997 3 4899999999999999876544
No 181
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=1.6e-27 Score=226.86 Aligned_cols=322 Identities=15% Similarity=0.106 Sum_probs=228.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh----cCCCC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSP---TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL----ARPGA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~---~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~~~g~ 98 (387)
..|.+.+++.+.+.. +..|.+ .+|..++++.+++++.+.+|... .+++++|+++++..++.++ .++||
T Consensus 78 ~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd 152 (474)
T 1wyu_B 78 YNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDRGE 152 (474)
T ss_dssp CCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhcCC
Confidence 335566666665322 223332 44566788888888877665432 4668899999998866554 35777
Q ss_pred -----eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHH
Q 038416 99 -----NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 99 -----~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
+|+++.|+|+.+...+. ..|++++.++++ .++.+|+++|++++++++++|++++| ||+|.+. +++++|
T Consensus 153 ~~~r~~Vlv~~~~h~~~~~~~~--~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~--~~l~~i 225 (474)
T 1wyu_B 153 GRTRRVVLVPDSAHGSNPATAS--MAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP-NTLGLFE--RRILEI 225 (474)
T ss_dssp TTTCCEEEEETTSCTHHHHHHH--HTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCC--TTHHHH
T ss_pred ccCCCEEEEeCCcChhhHHHHH--HCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-CCCcccC--CCHHHH
Confidence 99999999999999988 899999999875 34678999999999889999999998 5899873 358999
Q ss_pred HHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccccc----ccceEEEEeeCCCCcccchhHHHH
Q 038416 174 ARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVP----GWRLGWLVTSDPNGILQNSGFVDS 249 (387)
Q Consensus 174 ~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~----g~r~G~i~~~~~~~~~~~~~~~~~ 249 (387)
+++|+++|+++|+|++|..+.++ ......+. ..+++.|++|+|+.+ |+|+||+++++ ++++.
T Consensus 226 ~~l~~~~g~~li~Dea~~~~~~g---~~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~~~--------~l~~~ 291 (474)
T 1wyu_B 226 SRLCKEAGVQLYYDGANLNAIMG---WARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGVKA--------HLAPY 291 (474)
T ss_dssp HHHHHHHTCEEEEEGGGGGGTTT---TCCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEECG--------GGGGG
T ss_pred HHHHHHcCCEEEEeCchhhhhcc---CCCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEEcH--------HHHHh
Confidence 99999999999999999865532 11222222 348888999998765 36999999976 34443
Q ss_pred HHh-h-------------------hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 038416 250 IKG-C-------------------LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK 309 (387)
Q Consensus 250 ~~~-~-------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (387)
+.. . ....++.+...+.++..++.....+++.+..+++.++++++.+.|+++ ++.+. .
T Consensus 292 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 369 (474)
T 1wyu_B 292 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVP-Y 369 (474)
T ss_dssp CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCS-S
T ss_pred CCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEec-C
Confidence 321 0 001223556667777777765456778888999999999999999987 77743 2
Q ss_pred CCceE-EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC--CCCeEEEEeeC--ChHhHHHHHHHHHHHHHH
Q 038416 310 PQGAM-FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG--MKNWLRIAFAA--EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 310 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~Ri~~~~--~~e~~~~~~~~l~~~~~~ 382 (387)
+...+ .+++.++. + .+..++...+++ +||.+ ++..|. ..+++||+++. +++++++++++|++++++
T Consensus 370 ~~~~~~~~~~~~~~----~-~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 370 DGPSMHEFVAQPPE----G-FRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CSSCCSCEEEBCST----T-CCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred CCCcceEEEEEcCC----C-CCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 22111 14555521 1 245677777754 59985 555453 36799999975 899999999999988753
No 182
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=4.1e-28 Score=228.27 Aligned_cols=323 Identities=12% Similarity=0.054 Sum_probs=206.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.......| ..+++.++++++.+.++ ++++|++++|+++|+..+++... ..+++|++.
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~ 140 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKF 140 (427)
T ss_dssp TCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 689999999999876432222 23556666666666544 57899999999999999995532 234789999
Q ss_pred CCCCcchHHHhhccCC-CceeeeeccCCCCCcc------------CChhhHHHhhcc---CceEEEEeCCCCCccccCC-
Q 038416 104 RPGYPLYEIHAAGSNN-NLEARHYDLLPEKRWE------------VDLDGVEALADE---NTVAIVIINPGNPCGNVFS- 166 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~- 166 (387)
.|+|+++...+. .. +.....+.+....+.. -|+++|++++++ ++++|+++.++|++|...+
T Consensus 141 ~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~ 218 (427)
T 3fq8_A 141 EGCYHGHADMFL--VKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPD 218 (427)
T ss_dssp ETCCCCSCGGGC--SSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCC
T ss_pred CCCcCCCCHHHH--HhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCC
Confidence 999987654443 22 2222211111111110 078999998865 4555555555677887655
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
.+++++|.++|++||+++|+||+|+++ ..+... ....+... ..+.|+||+++ +|+|+||+++++ ++
T Consensus 219 ~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~---~di~t~sK~~~-~G~~~G~~~~~~--------~~ 284 (427)
T 3fq8_A 219 AGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVT---PDLTTLGKIIG-GGLPVGAYGGKR--------EI 284 (427)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCC---CSEEEECGGGG-TTSSCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCC---CChhhhhhhhh-CCcceEEEEEcH--------HH
Confidence 556999999999999999999999987 444321 11111111 12458899987 799999999865 67
Q ss_pred HHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEE
Q 038416 247 VDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK----EIPCITCPVKPQGAMFVMV 318 (387)
Q Consensus 247 ~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~g~~~~~ 318 (387)
++.+... ...++++++++++++.++++...+ ++..++++++++.+++.|+ .++ +. ...+..|.++++
T Consensus 285 ~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~~~g~~~~~ 359 (427)
T 3fq8_A 285 MQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETG-HA-ACGGQVSGMFGF 359 (427)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTT-CC-CEEEEETTEEEE
T ss_pred HHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCC-CC-eEEEEeeeEEEE
Confidence 7766542 123456688888888888764322 1233344444444444443 332 22 113345778888
Q ss_pred ecCccccc--------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 319 KLNVSMLE--------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 319 ~~~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.+...... ......++...+ .++||.+.|+.. ..+|+++..+++++++++++|++++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 360 FFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 77542110 000123555555 566999998752 356666677999999999999998875
No 183
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=1.2e-27 Score=227.11 Aligned_cols=330 Identities=15% Similarity=0.108 Sum_probs=214.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g 97 (387)
.+|.+.+|+++++..... +|....+..+.+..+++.+.+..+ .+.++|++++|+++|++.+++.+.+ ++
T Consensus 72 ~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~ 148 (472)
T 3hmu_A 72 GRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEK 148 (472)
T ss_dssp CCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 589999999999876321 233222334555666666655443 3567999999999999999999874 45
Q ss_pred CeEEEcCCCCcchHHHhhccCCCc------------eeeeeccCC--C-CCccCC--------hhhHHHhhcc---CceE
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNL------------EARHYDLLP--E-KRWEVD--------LDGVEALADE---NTVA 151 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~--------~~~l~~~~~~---~~~~ 151 (387)
++|++.+|+|+++...+. ..+. .+..++.+. . +++ .+ +++|+++++. ...+
T Consensus 149 ~~ii~~~~~yHg~t~~~~--~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~a 225 (472)
T 3hmu_A 149 TVIISRKNAYHGSTVASS--ALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVA 225 (472)
T ss_dssp CEEEEETTCCCCSSHHHH--HHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred CEEEEEcCcCCCccHHhh--hccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 899999999998765444 2222 223333211 0 111 23 6778887752 3344
Q ss_pred EEEeCC-CCCccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccce
Q 038416 152 IVIINP-GNPCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRL 229 (387)
Q Consensus 152 v~l~~p-~nptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~ 229 (387)
+++++| ++++|... +++.+++|.++|++||+++|+||+|.+|...|.... ...+....+ +.++||+++.+|+|+
T Consensus 226 avi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a-~~~~~v~pd---i~t~sK~l~gg~~pl 301 (472)
T 3hmu_A 226 AFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFG-TQTMGIRPH---IMTIAKGLSSGYAPI 301 (472)
T ss_dssp EEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCH-HHHHTCCCS---EEEECGGGTTTSSCC
T ss_pred EEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccch-hHHhCCCCc---eeeechhhhcCCcce
Confidence 455555 67778754 888899999999999999999999999876664221 122222122 236889977666999
Q ss_pred EEEEeeCCCCcccchhHHHHHHhh--h-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHHH-HHHHHHHHHhhc---CC
Q 038416 230 GWLVTSDPNGILQNSGFVDSIKGC--L-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLK-ETADICYERIKE---IP 302 (387)
Q Consensus 230 G~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~l~~---~~ 302 (387)
|++++++ ++++.+... . ..+++.++++++++.++|+...+ +...++++ ++.+++++.|++ +|
T Consensus 302 G~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~ 370 (472)
T 3hmu_A 302 GGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTDHP 370 (472)
T ss_dssp EEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGGST
T ss_pred EEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999976 788887321 1 24567889999998888875322 23344445 555555555544 34
Q ss_pred CCCCCCCCCceEEEEEecCccccc--CC-----CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHH
Q 038416 303 CITCPVKPQGAMFVMVKLNVSMLE--DI-----GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGL 373 (387)
Q Consensus 303 ~~~~~~~~~~g~~~~~~~~~~~~~--~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~ 373 (387)
.+..+ +..|.++++.+...... .+ ....++...+ .++||.+.|+. +++||++ ..+++++++++
T Consensus 371 ~v~~v--r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l 442 (472)
T 3hmu_A 371 LVGEA--KIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----DRMIISPPLVITPAEIDEMF 442 (472)
T ss_dssp TEEEE--EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----TEEEECCCTTCCHHHHHHHH
T ss_pred CeEEE--EecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----CEEEEECCCCCCHHHHHHHH
Confidence 33322 33455666666431100 00 0133455555 45699999863 8999996 56899999999
Q ss_pred HHHHHHHHHhh
Q 038416 374 ERIKAFCQRHA 384 (387)
Q Consensus 374 ~~l~~~~~~~~ 384 (387)
++|++++++..
T Consensus 443 ~~l~~~l~~~~ 453 (472)
T 3hmu_A 443 VRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 184
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=2.4e-27 Score=220.45 Aligned_cols=323 Identities=14% Similarity=0.109 Sum_probs=220.0
Q ss_pred ccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 10 RHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYS-PTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
+++..+|.| ..++.+.+++.+.+... .|+ ...+..++|+.++++++ .+++++++|+++|+..
T Consensus 24 ~~~l~~~~p------~~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~al~~ 86 (391)
T 3dr4_A 24 LPRISVAAP------RLDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTALHL 86 (391)
T ss_dssp ----CCCCC------CCCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH
T ss_pred CceeccCCC------CCCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHH
Confidence 344555555 44578889998888754 344 45678999999999993 2388899999999999
Q ss_pred HHHhh-cCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 89 SLSVL-ARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 89 ~~~~l-~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
++.++ +++||+|+++.|+|+++...+. ..|.+++.+++++ +++.+|++++++++++++++|+ ++||||...+
T Consensus 87 ~l~~~~~~~gd~vl~~~~~~~~~~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~- 159 (391)
T 3dr4_A 87 ALVAMGIGPGDEVIVPSLTYIASANSVT--YCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD- 159 (391)
T ss_dssp HHHHHTCCTTCEEEEESSSCTHHHHHHH--HTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHcCCCCcCEEEECCCchHHHHHHHH--HCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh-
Confidence 99999 8999999999999999999999 9999999999864 3568899999999988888777 5679999866
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccc-cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+++|.++|+++|+++|+|++|+... +.+. ....+. + +.+.||+|..+++|.+.|++++++ +++
T Consensus 160 --~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---i~~~S~s~~K~l~~g~gg~~~~~~-------~~~ 223 (391)
T 3dr4_A 160 --MDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG-D---CATFSFFGNAIITTGEGGMITTND-------DDL 223 (391)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECBTTSSSCCBSCEEEEESC-------HHH
T ss_pred --HHHHHHHHHHcCCEEEEECcccccceECCe---eecccC-C---EEEEECCCCCcCCcCCeEEEEECC-------HHH
Confidence 8889999999999999999998532 2221 111111 1 667776633334556789988865 246
Q ss_pred HHHHHhhhhccCC-------------cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CC
Q 038416 247 VDSIKGCLNAASH-------------PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVK--PQ 311 (387)
Q Consensus 247 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~ 311 (387)
.+.+......... .......++..... ...+++..++.+++++.+.+.|+++ ++..... +.
T Consensus 224 ~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 299 (391)
T 3dr4_A 224 AAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVAL 299 (391)
T ss_dssp HHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCT
T ss_pred HHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCC
Confidence 6666544321111 11112222222211 2345667777888888888999887 6664422 11
Q ss_pred ---ce-EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc---C-----------------CCCeEEEEee--CC
Q 038416 312 ---GA-MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV---G-----------------MKNWLRIAFA--AE 365 (387)
Q Consensus 312 ---~g-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---~-----------------~~~~~Ri~~~--~~ 365 (387)
.+ ..+++.++.. .+ .+..++...+ .++||.+.+|... . ....+|++++ .+
T Consensus 300 ~~~~~~~~~~i~~~~~--~~-~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 375 (391)
T 3dr4_A 300 TGRHVFWMYTVRLGEG--LS-TTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLT 375 (391)
T ss_dssp TSCCCCSSEEEEECSS--CS-SCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCC
T ss_pred CCcceeEEEEEEECCc--cc-hhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCC
Confidence 12 2235555421 01 1355666666 5669999987511 0 0246899984 58
Q ss_pred hHhHHHHHHHHHHHH
Q 038416 366 PATLEDGLERIKAFC 380 (387)
Q Consensus 366 ~e~~~~~~~~l~~~~ 380 (387)
++|++.+++.|++++
T Consensus 376 ~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 376 EADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987653
No 185
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.96 E-value=9.8e-27 Score=222.56 Aligned_cols=341 Identities=13% Similarity=0.054 Sum_probs=237.4
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEE---EcCChHHHHHHHHHhhcCC----
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVY---LTLGCSQAIEISLSVLARP---- 96 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~---~~~g~~~a~~~~~~~l~~~---- 96 (387)
.++++.+.+++.+++... ..+|....+..++++.+.+++.+.+|.+..+++++ +|+|+++++..++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~ 144 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (502)
T ss_dssp CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence 457889999999887653 22444444567888888888888887654455544 4899999999998887654
Q ss_pred ----CC-----eEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCH
Q 038416 97 ----GA-----NILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 97 ----g~-----~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 167 (387)
|+ +|+++.++|..+...++ ..|++++.+++++ +++.+|++++++++++++++|++++|+||||.+.+
T Consensus 145 ~~~~G~~~~~~~vi~~~~~h~s~~~~~~--~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~- 220 (502)
T 3hbx_A 145 RKAEGKPVDKPNIVTGANVQVCWEKFAR--YFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED- 220 (502)
T ss_dssp HHHTTCCCSCCEEEEETTCCHHHHHHHH--HTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC-
T ss_pred HHhcCCCCCCcEEEEcCCchHHHHHHHH--HcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC-
Confidence 76 89999999999999999 9999999999854 34789999999999999999999999999999977
Q ss_pred HHHHHHHHHHHhc------CcEEeeccccccccc---CCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCC
Q 038416 168 QHLQKIARTARNL------GIIVIADEVYNHLAF---GSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPN 238 (387)
Q Consensus 168 ~~~~~l~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~ 238 (387)
+++|.++|+++ |+++++|++|+++.. .+.....+. ...-.++..|.+|+ +.++.++|+++++++.
T Consensus 221 --l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~ 294 (502)
T 3hbx_A 221 --VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-GLVYAGIGWVIWRNKE 294 (502)
T ss_dssp --HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-TCCCSSCEEEEESSGG
T ss_pred --HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-cCCCCCeEEEEEeCHH
Confidence 77888888888 999999999996541 121111111 11224667789998 5666789999887532
Q ss_pred CcccchhHHHHHH---hhh-----h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 038416 239 GILQNSGFVDSIK---GCL-----N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPV 308 (387)
Q Consensus 239 ~~~~~~~~~~~~~---~~~-----~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 308 (387)
.+. +.+. .+. . ..++.+.....++..++.....+.+.++.++..++++++.+.|++++++.++.
T Consensus 295 ~l~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (502)
T 3hbx_A 295 DLP------EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVS 368 (502)
T ss_dssp GSC------GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECS
T ss_pred Hhh------HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 1111 010 0 01112222223333333333345678888899999999999999998788553
Q ss_pred CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCcc---CCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 309 KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTV---GMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.....++++++++... + .+..++...| .++||.+...... ....++||+++ .+.++++.+++.|+++++++
T Consensus 369 ~~~~~~~v~f~~~~~~--~-~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l 444 (502)
T 3hbx_A 369 KDEGVPLVAFSLKDSS--C-HTEFEISDML-RRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMREL 444 (502)
T ss_dssp CSSSSSEEEEEESSCS--S-CCHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEecCCC--c-CCHHHHHHHH-HhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3134556666765311 0 1344666665 6679986432221 12358999995 57899999999999999887
Q ss_pred hh
Q 038416 384 AK 385 (387)
Q Consensus 384 ~~ 385 (387)
++
T Consensus 445 ~~ 446 (502)
T 3hbx_A 445 DE 446 (502)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 186
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=2e-27 Score=223.33 Aligned_cols=331 Identities=13% Similarity=0.060 Sum_probs=215.1
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEI 88 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 88 (387)
.+++.+.|....+.++ .+|.+.+++.+++.......| ..++++.+++++.+.++ +.++|++++|+++|+..
T Consensus 53 ~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~~~ 123 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEATMS 123 (424)
T ss_dssp EEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHHHH
T ss_pred EEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHH
Confidence 3455555443333344 789999999999976422222 23555666666655543 56899999999999999
Q ss_pred HHHh---hcCCCCeEEEcCCCCcchHHHhhcc------------CCCc------eeeeeccCCCCCccCChhhHHHhhcc
Q 038416 89 SLSV---LARPGANILIPRPGYPLYEIHAAGS------------NNNL------EARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 89 ~~~~---l~~~g~~vl~~~p~~~~~~~~~~~~------------~~g~------~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
+++. +.+ ++.|++.+|+|+++...+... ..|. .+..++. .|+++|+++++.
T Consensus 124 al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~ 195 (424)
T 2e7u_A 124 ALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKR 195 (424)
T ss_dssp HHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHH
T ss_pred HHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHh
Confidence 9986 444 578999999999865433200 0121 1222221 378999988863
Q ss_pred --CceEEEEeCCCC-CccccC-CHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCccccc
Q 038416 148 --NTVAIVIINPGN-PCGNVF-SYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI 223 (387)
Q Consensus 148 --~~~~v~l~~p~n-ptG~~~-~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~ 223 (387)
+..++++++|+| +||.++ +.+++++|.++ ++||+++|+||+|+++ ..+.. ..+..+....+ +.|+||+++
T Consensus 196 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~ 269 (424)
T 2e7u_A 196 RGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPD---LVTLGKILG 269 (424)
T ss_dssp HGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGG
T ss_pred CCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcc---hhhhhhhhh
Confidence 344566778865 489765 78999999999 9999999999999987 33321 11111111112 338999987
Q ss_pred ccccceEEEEeeCCCCcccchhHHHHHHhh----hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 224 VPGWRLGWLVTSDPNGILQNSGFVDSIKGC----LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 224 ~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
+|+|+||+++++ ++++.+... ...+++.+++++.++.++++...+ .++..++++++++++++.|+
T Consensus 270 -~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~ 338 (424)
T 2e7u_A 270 -GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLK 338 (424)
T ss_dssp -TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHH
T ss_pred -CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH
Confidence 489999999976 676666542 123456788888888887765322 24456666777777777776
Q ss_pred cC---CCCCCCCCCCceEEEEEecCcccccC--------CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHh
Q 038416 300 EI---PCITCPVKPQGAMFVMVKLNVSMLED--------IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPAT 368 (387)
Q Consensus 300 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~ 368 (387)
++ .++... .+..|.++|+.++...... .....++...++ ++||.+.|+.. ..+|+++..++++
T Consensus 339 ~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t~~~ 412 (424)
T 2e7u_A 339 EVLKEKGLPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHREED 412 (424)
T ss_dssp HHHHHTTCCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCCHHH
T ss_pred HHHHhCCCceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCCHHH
Confidence 53 123211 2445678888886311000 012345666664 67999998752 3577777789999
Q ss_pred HHHHHHHHHHH
Q 038416 369 LEDGLERIKAF 379 (387)
Q Consensus 369 ~~~~~~~l~~~ 379 (387)
+++++++|+++
T Consensus 413 i~~~l~~l~~~ 423 (424)
T 2e7u_A 413 VEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 187
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=4e-27 Score=219.49 Aligned_cols=314 Identities=13% Similarity=0.049 Sum_probs=207.8
Q ss_pred CCCcHHHHHHHHHHhcCC-CCCCCCCC--CCcHHHHHHHHHHHhhcCCCCCCCCCEEE-cCChHHHHHHHHHhhcCCCCe
Q 038416 24 LSDSTVAEDAVVDALRTA-HYNCYSPT--LGVPSARRGIADYLNRDLPYKLSPEDVYL-TLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~-~~~~y~~~--~~~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~a~~~~~~~l~~~g~~ 99 (387)
.++|+.+++++.+..... ...++.+. ....++|+.+++++ |.+ .+++|++ |+|+++++..++.+++++| .
T Consensus 49 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~~t~g~t~al~~~~~~l~~~g-v 122 (398)
T 2fyf_A 49 SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVILGNGGATAFWDAAAFGLIDKR-S 122 (398)
T ss_dssp CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEEEETCHHHHHHHHHHHTCSSC-E
T ss_pred CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEeCCchhHHHHHHHHHhcCCC-e
Confidence 368889998887732110 01122211 11344555555555 432 3468998 9999999999999998887 2
Q ss_pred EEEcCCCCcc-hHHHhhccCC--CceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 100 ILIPRPGYPL-YEIHAAGSNN--NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 100 vl~~~p~~~~-~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
+++..+.|.. ....+. .. |.++..++++ +++..+. .+++++++|++++|+||||.+++.+++.++
T Consensus 123 ~~v~~~~~~~~~~~~~~--~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~i~~~--- 190 (398)
T 2fyf_A 123 LHLTYGEFSAKFASAVS--KNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRRPEGS--- 190 (398)
T ss_dssp EEEECSHHHHHHHHHHH--HCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCCCTTC---
T ss_pred EEEeCCHHHHHHHHHHH--HhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcceecchHHhhhh---
Confidence 2333333321 122334 44 7788888775 3333332 256689999999999999999996666554
Q ss_pred HHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh---
Q 038416 177 ARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--- 253 (387)
Q Consensus 177 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--- 253 (387)
+|+++|+|++|+.+.. ...+.. ..+++.|+||+++++| ++||+++++ ++++.++..
T Consensus 191 ---~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~--------~~~~~l~~~~~~ 249 (398)
T 2fyf_A 191 ---DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP--------AALSRIEAIAAT 249 (398)
T ss_dssp ---C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH--------HHHHHHHHHHHT
T ss_pred ---cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEECH--------HHHHHhhccccc
Confidence 7999999999986432 112211 2378899999998875 599999875 566655321
Q ss_pred -------------------hhccCCcchHHHHHHHHHhhhccHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--
Q 038416 254 -------------------LNAASHPVTFIQAAVPRIVDETNEAF-FAKIIGLLKETADICYERIKEIPCITCPV-KP-- 310 (387)
Q Consensus 254 -------------------~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~-- 310 (387)
.....+++...+.++..+++...+.. +++..++++++++.+.+.|++++++.+.. .|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 329 (398)
T 2fyf_A 250 GRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGL 329 (398)
T ss_dssp TCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGG
T ss_pred CCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhh
Confidence 01124556666777777776433332 78888999999999999999987777442 14
Q ss_pred CceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 311 QGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
..+.++|++++.. .+..++...|.+ +||.+.+|......+++||+++ .+++++++++++|++++++
T Consensus 330 ~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 330 RSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp BCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 2344888887531 145677777754 4999988733222579999996 5899999999999988765
No 188
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=2e-26 Score=209.34 Aligned_cols=278 Identities=15% Similarity=0.107 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhc--cCCCceeeeeccCCC
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAG--SNNNLEARHYDLLPE 131 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~--~~~g~~~~~~~~~~~ 131 (387)
++|+.++++++ .+ +.++++++++++..++.++.++||+|+++.|+|+++...+.. ...|.++..++.
T Consensus 2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999983 33 455555558999999999999999999999999987666530 047888888765
Q ss_pred CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHh-cCcEEeecccccccccCCCCCccccccCCCc
Q 038416 132 KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN-LGIIVIADEVYNHLAFGSTPYVPMGVFGSIV 210 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~-~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (387)
.|++++++++++++++|++++|+||||..++ +++|.++|++ +|+++|+|++|+.+.+. .++ .+ +
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence 3788999999889999999999999999987 8899999999 99999999999965432 122 12 3
Q ss_pred cEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhhhc--cCCcchHHHHHHHHHhhhccHHHHHHHHHHH
Q 038416 211 PVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCLNA--ASHPVTFIQAAVPRIVDETNEAFFAKIIGLL 287 (387)
Q Consensus 211 ~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 287 (387)
..+++.|+||+++.+|.| +||+++++ +++++.++..... +.+.+++.++++...++. +..+.+..
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 458999999999999999 79998863 2567777665433 445667676665555542 23333444
Q ss_pred HHHHHHHHHHhhcC--------------CCCCCCC--CCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCC-
Q 038416 288 KETADICYERIKEI--------------PCITCPV--KPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGR- 350 (387)
Q Consensus 288 ~~~~~~~~~~l~~~--------------~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~- 350 (387)
..+.+.+.+.+++. |++.+.. ....+.++.+.+. +..+ +..++.+.||.+.+.+
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEK-AKKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHH-HHHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHH-HHHHHHhCCCceeccCC
Confidence 44444444444332 1221110 0113445666654 2333 4455678899776542
Q ss_pred --------c----------------cCC-CCeEEEEeeC--ChHhHHHHHHHHHH
Q 038416 351 --------T----------------VGM-KNWLRIAFAA--EPATLEDGLERIKA 378 (387)
Q Consensus 351 --------~----------------~~~-~~~~Ri~~~~--~~e~~~~~~~~l~~ 378 (387)
. ++. ++++|++++. ++++++.+++.|++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1 112 4799999965 46777777777654
No 189
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=4.7e-27 Score=222.12 Aligned_cols=328 Identities=16% Similarity=0.096 Sum_probs=216.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCC---CCcHHHH--HHHH-HHHhhcCCCCCCCCCEEE-cCChHHHHHHHHHhhcCCCC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPT---LGVPSAR--RGIA-DYLNRDLPYKLSPEDVYL-TLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~---~~~~~lr--~~ia-~~~~~~~~~~~~~~~i~~-~~g~~~a~~~~~~~l~~~g~ 98 (387)
.++.+.+++.+.+.+....+|+.. .+...++ +.++ +++.+.++ .+ .+.+ ++|+++++..++.+++++||
T Consensus 57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~sGs~a~~~a~~~~~~~Gd 132 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHSGAQANAAVLHALMSPGE 132 (447)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSSHHHHHHHHHHHHCCTTC
T ss_pred CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCCHHHHHHHHHHHhcCCCC
Confidence 499999999988864322233321 2333333 3333 44444333 22 3444 78889999999999999999
Q ss_pred eEEEcCCCCcchHHHhh-ccCC--CceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHH
Q 038416 99 NILIPRPGYPLYEIHAA-GSNN--NLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 99 ~vl~~~p~~~~~~~~~~-~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~ 174 (387)
+|+++.|+|.++..... .... +..+..+++++ .++.+|+++++++++ .+++++++++|+||++. ++++|.
T Consensus 133 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~-----~l~~i~ 206 (447)
T 3h7f_A 133 RLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL-----DFAAFR 206 (447)
T ss_dssp EEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC-----CHHHHH
T ss_pred EEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc-----CHHHHH
Confidence 99999999877322111 0022 23444555543 345789999999885 46888888899999886 489999
Q ss_pred HHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 175 RTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
++|+++|+++|+|++|. ++.+.+....++.. ..+++.|+||++ +|+|.||+++++ ++++.+...
T Consensus 207 ~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~-----~di~~~s~sK~l--~G~~gG~i~~~~--------~~~~~l~~~ 271 (447)
T 3h7f_A 207 SIADEVGAKLLVDMAHFAGLVAAGLHPSPVPH-----ADVVSTTVHKTL--GGGRSGLIVGKQ--------QYAKAINSA 271 (447)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT-----CSEEEEESSGGG--CCCSCEEEEECG--------GGHHHHHHH
T ss_pred HHHHHcCCEEEEECCchhhhhcCCCCCCCCCC-----CcEEEecCCcCC--CCCCeEEEEECH--------HHHHHHhhh
Confidence 99999999999999975 44444432222211 127789999985 578999999875 677777654
Q ss_pred hh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCCCceEEEEEecCcccccC
Q 038416 254 LN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----PCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 254 ~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
.. ..+++......++..++....+..+++..+++.++++++.+.|++. +++..+..+..++++|+.+....
T Consensus 272 ~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--- 348 (447)
T 3h7f_A 272 VFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP--- 348 (447)
T ss_dssp HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS---
T ss_pred cCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC---
Confidence 32 2233344445555555554334456888888999999999998875 46664433456778888775321
Q ss_pred CCcHHHHHHHHHHhcCeEEE----cC--CccCCCCeEEEEee------CChHhHHHHHHHHHHHHHHh
Q 038416 328 IGDDLEFCLKLAKEESVIIL----PG--RTVGMKNWLRIAFA------AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~----~g--~~~~~~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~~ 383 (387)
...+.+..+++++||.+. |+ .....++++||++. .++++++++++.|.+++++.
T Consensus 349 --~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 349 --LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp --CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred --CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 123455666788899998 55 22334678999982 57899999999999988654
No 190
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.95 E-value=1.3e-27 Score=225.95 Aligned_cols=317 Identities=13% Similarity=0.138 Sum_probs=208.7
Q ss_pred CcHHHH-H-HHHH---HhcCCCCCCCCC---CCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc---
Q 038416 26 DSTVAE-D-AVVD---ALRTAHYNCYSP---TLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--- 94 (387)
Q Consensus 26 ~~~~v~-~-a~~~---~~~~~~~~~y~~---~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--- 94 (387)
.+|.+. + ++++ ++.... +|+. .....++++.+++++ + +...++|++++|+++|++.+++.+.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEEEeCchHHHHHHHHHHHHHHh
Confidence 489999 8 9999 776532 2221 112345555555555 2 2467899999999999999997643
Q ss_pred C----------C-CCeEEEcCCCCcchHHHhhccCCC--------c-----eeeeeccCC--CCC------ccCChhhHH
Q 038416 95 R----------P-GANILIPRPGYPLYEIHAAGSNNN--------L-----EARHYDLLP--EKR------WEVDLDGVE 142 (387)
Q Consensus 95 ~----------~-g~~vl~~~p~~~~~~~~~~~~~~g--------~-----~~~~~~~~~--~~~------~~~~~~~l~ 142 (387)
+ + |++|++.+|+|+++..... +..+ . ++..++.+. ... ...++++|+
T Consensus 144 ~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le 222 (449)
T 2cjg_A 144 SRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL-SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQAR 222 (449)
T ss_dssp HHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG-GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEECCCcCCcccchh-hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHH
Confidence 2 2 8999999999997654332 0122 1 334444322 000 013556688
Q ss_pred Hhhc---cCceEEEEeCC-CCCcc-ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEec
Q 038416 143 ALAD---ENTVAIVIINP-GNPCG-NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGS 217 (387)
Q Consensus 143 ~~~~---~~~~~v~l~~p-~nptG-~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s 217 (387)
++++ +++++|+ ++| +||+| ..++.+++++|.++|++||+++|+||+|+++.+.|.... +..++...+ +.|
T Consensus 223 ~~i~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~~d---i~t 297 (449)
T 2cjg_A 223 AAFETRPHDIACFV-AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWA-YQQLDVAPD---IVA 297 (449)
T ss_dssp HHHHHSTTTEEEEE-ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSST-HHHHTCCCS---EEE
T ss_pred HHHHhcCCceEEEE-EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCccee-ecccCCCce---EEE
Confidence 8885 4555555 555 78999 588999999999999999999999999998776654221 111221112 337
Q ss_pred CcccccccccceEEEEeeCCCCcccchhHHHHH-----Hhh-hhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHH
Q 038416 218 ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI-----KGC-LNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETA 291 (387)
Q Consensus 218 ~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 291 (387)
+||.+ |+||+++++ ++++.+ ... ...+++++++++.++.++++...+ ++..+++++++
T Consensus 298 ~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~ 361 (449)
T 2cjg_A 298 FGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQHG 361 (449)
T ss_dssp ECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHH
T ss_pred ecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHH
Confidence 89986 799999875 455431 111 124567788899988888874322 23456666777
Q ss_pred HHHHHHhhc----CCC-CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eC
Q 038416 292 DICYERIKE----IPC-ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AA 364 (387)
Q Consensus 292 ~~~~~~l~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~ 364 (387)
+++++.|++ ++. +. . .+..|.|+++.++.. .+..++...++ ++||.+.|+. .+++|+++ ..
T Consensus 362 ~~l~~~L~~l~~~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~~~ 429 (449)
T 2cjg_A 362 KYLRARLDELAADFPAVVL-D-PRGRGLMCAFSLPTT-----ADRDELIRQLW-QRAVIVLPAG----ADTVRFRPPLTV 429 (449)
T ss_dssp HHHHHHHHHHHHHSTTTSE-E-EEEETTEEEEECSSH-----HHHHHHHHHHH-HTTEECEEET----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHhhCCCcee-e-EeeccEEEEEEECCh-----HHHHHHHHHHH-HCCeEEecCC----CCEEEEECCCCC
Confidence 777777765 343 33 2 233466777777531 12456777775 5799999863 58999977 46
Q ss_pred ChHhHHHHHHHHHHHHHHh
Q 038416 365 EPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 365 ~~e~~~~~~~~l~~~~~~~ 383 (387)
+++++++++++|+++++++
T Consensus 430 t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 430 STAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8999999999999998764
No 191
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=7.9e-27 Score=216.62 Aligned_cols=212 Identities=17% Similarity=0.087 Sum_probs=161.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
....++|+.++++++ . ++.++++++++|++.++. ++++||+|+++.|+|++... .++ ..|.++..
T Consensus 55 ~~~~~lr~~la~~~g------~--~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~--~~G~~v~~ 123 (393)
T 1n8p_A 55 PNRENLERAVAALEN------A--QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVAN--AHGVETSF 123 (393)
T ss_dssp HHHHHHHHHHHHHTT------C--SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTST--TTCSCCEE
T ss_pred hhHHHHHHHHHHHhC------C--CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHH--HcCcEEEE
Confidence 356789999999983 2 256666667999999999 88999999999999985443 456 67888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc----CcEEeecccccccccCCCCCc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL----GIIVIADEVYNHLAFGSTPYV 201 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~----~~~li~D~~~~~~~~~~~~~~ 201 (387)
++++ | +++++++++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+.+.+. .
T Consensus 124 v~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~--- 188 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N--- 188 (393)
T ss_dssp ESSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C---
T ss_pred eCCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-C---
Confidence 8753 6 8899999889999999999999999997 88899999999 9999999999986652 1
Q ss_pred cccccCCCccEEEEecCcccccccccce-EEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHH
Q 038416 202 PMGVFGSIVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAF 279 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 279 (387)
...+ +..+++.|+||.++.+|+|+ ||+++++ +++++.+..... .+...++....++...++.
T Consensus 189 -~~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----- 252 (393)
T 1n8p_A 189 -PLNF---GADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----- 252 (393)
T ss_dssp -GGGG---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----
T ss_pred -HHHc---CCeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----
Confidence 1122 24489999999999999999 9998852 257777765543 3445556555555555543
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC
Q 038416 280 FAKIIGLLKETADICYERIKEIPC 303 (387)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~ 303 (387)
+..+.++..++++.+.+.|++.+.
T Consensus 253 ~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 253 LHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 455566666777777777776543
No 192
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=4.3e-27 Score=217.40 Aligned_cols=313 Identities=16% Similarity=0.134 Sum_probs=215.4
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIP 103 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~ 103 (387)
+.++.+.+++.+.+... .|....+..++|+.++++++ .+++++++|+++|+..++.++ +++||+|+++
T Consensus 14 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~ 82 (373)
T 3frk_A 14 EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVP 82 (373)
T ss_dssp HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 35678888888887754 35555678999999999993 248999999999999999999 8999999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
.++|+++...++ ..|.++..+++++ +++.+|++++++++++++++|+ |+||||...+ +++|.++|+++|++
T Consensus 83 ~~~~~~~~~~~~--~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~ 153 (373)
T 3frk_A 83 SNTFIATALAVS--YTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLK 153 (373)
T ss_dssp TTSCTHHHHHHH--HHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCE
T ss_pred CCCcHHHHHHHH--HcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHcCCE
Confidence 999999999988 8999999998864 3468899999999988888777 6779999876 78889999999999
Q ss_pred Eeecccccccc-cCCCCCccccccCCCccEEEEecCc--ccccccccceEEEEeeCCCCcccchhHHHHHHhhhhcc---
Q 038416 184 VIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSIS--KRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAA--- 257 (387)
Q Consensus 184 li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~s--K~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 257 (387)
+|+|++|+.+. +++. .+..+ . .+++.||+ |.++..| +.|++++++ +++.+.++......
T Consensus 154 li~D~a~~~g~~~~~~---~~~~~-~---d~~~~S~~~~K~l~~~g-~gg~~~~~~-------~~~~~~~~~~~~~g~~~ 218 (373)
T 3frk_A 154 LIEDAAQAHGSLYKGM---KVGSL-G---DAAGFSFYPAKNLGSLG-DGGAVVTND-------KDLAEKIKALSNYGSEK 218 (373)
T ss_dssp EEEECTTCTTCEETTE---ETTSS-S---SEEEEECCTTSSSCCSS-SCEEEEESC-------HHHHHHHHHHHBTTCSB
T ss_pred EEEECCcccCCEECCE---ecccc-c---cEEEEeCcCCCccCccc-eeEEEEeCC-------HHHHHHHHHHHhcCccc
Confidence 99999998533 2222 11111 1 27778877 8864434 378888764 24666665443211
Q ss_pred ----------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 258 ----------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 258 ----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
...+.....+....+ ..+++..++.+++.+++.+.|++++ +.....+..+...|..++...
T Consensus 219 ~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--- 289 (373)
T 3frk_A 219 KYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS--- 289 (373)
T ss_dssp TTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---
T ss_pred CCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---
Confidence 112222222222212 3356677777888888888888875 553322332322222221110
Q ss_pred CCcHHHHHHHHHHhcCeEEEcCCccCC-----------------------CCeEEEEee--CChHhHHHHHHHHHHHHHH
Q 038416 328 IGDDLEFCLKLAKEESVIILPGRTVGM-----------------------KNWLRIAFA--AEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~ 382 (387)
.+..++...| .++||.+.++..... ...+|++++ .+++|++.+++.|++...+
T Consensus 290 -~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 290 -EKRDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp -SSHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred -CCHHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 1345566655 566999987641100 157999994 5899999999999876554
Q ss_pred h
Q 038416 383 H 383 (387)
Q Consensus 383 ~ 383 (387)
+
T Consensus 368 ~ 368 (373)
T 3frk_A 368 H 368 (373)
T ss_dssp -
T ss_pred h
Confidence 3
No 193
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=7e-26 Score=210.95 Aligned_cols=214 Identities=14% Similarity=0.136 Sum_probs=160.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH----hhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH----AAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~----~~~~~~g~~~~~ 125 (387)
....++|+.+|++++ .+++++++|+++|+..++.+++++||+|+++.+.|++.... ++ ..|.++..
T Consensus 82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~--~~G~~v~~ 151 (415)
T 2fq6_A 82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILS--KLGVTTSW 151 (415)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGG--GGTCEEEE
T ss_pred chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH--HcCcEEEE
Confidence 346789999999883 24677778899999999999999999999999999877644 34 57888888
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
++.+ |++++++++++++++|++++|+||+|.+++ +++|+++|++ +|+++|+|++|+.... ..++
T Consensus 152 v~~~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~----~~p~ 217 (415)
T 2fq6_A 152 FDPL-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKAL 217 (415)
T ss_dssp ECTT-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGG
T ss_pred ECCC-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc----CCcc
Confidence 7642 789999999999999999999999999987 7889999999 9999999999985321 1122
Q ss_pred cccCCCccEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHH
Q 038416 204 GVFGSIVPVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFA 281 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 281 (387)
.+. ..+++.|++|.++.+|.+ .|++++++ ++++.++.... .+...++...+.+...++ .+.
T Consensus 218 -~~g---~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~-----~l~ 280 (415)
T 2fq6_A 218 -DFG---IDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGLR-----TLG 280 (415)
T ss_dssp -GGT---CSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHHH-----HHH
T ss_pred -ccC---CeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhh-----HHH
Confidence 122 348899999999888754 68888865 45666665443 233444443443333333 356
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCC
Q 038416 282 KIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
.+.++..++++.+.+.|++.|.+
T Consensus 281 ~r~~~~~~n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 281 VRLRQHHESSLKVAEWLAEHPQV 303 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCe
Confidence 66677777888888888776543
No 194
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=5.9e-26 Score=211.37 Aligned_cols=283 Identities=16% Similarity=0.122 Sum_probs=194.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH----HhhccCCCceeee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI----HAAGSNNNLEARH 125 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~----~~~~~~~g~~~~~ 125 (387)
.+..+||+.++++++ .. +.+++++ +++|+..++. ++++||+|+++.|+|++... .++ ..|.++..
T Consensus 67 p~~~~l~~~la~~~g------~~-~~i~~~s-G~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~--~~G~~v~~ 135 (403)
T 3cog_A 67 PTRNCLEKAVAALDG------AK-YCLAFAS-GLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVAS--EFGLKISF 135 (403)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEESC-HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGG--GGTCEEEE
T ss_pred chHHHHHHHHHHHhC------CC-cEEEECC-HHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHH--HcCCEEEE
Confidence 466899999999984 22 4555555 5699999999 88999999999999987443 345 68999988
Q ss_pred eccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC-cEEeecccccccccCCCCCcccc
Q 038416 126 YDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG-IIVIADEVYNHLAFGSTPYVPMG 204 (387)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~-~~li~D~~~~~~~~~~~~~~~~~ 204 (387)
++.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++| +++|+|++|+.+.+. .++.
T Consensus 136 v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----~~~~ 201 (403)
T 3cog_A 136 VDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----RPLA 201 (403)
T ss_dssp ECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----CTTT
T ss_pred ECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----Cccc
Confidence 8753 789999999989999999999999999997 889999999999 999999999975532 1221
Q ss_pred ccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 205 VFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 205 ~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
+ +..+++.|++|.++.+| .++||+++++ +++++.++.... .+...+++.++++...++. +..
T Consensus 202 -~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~ 265 (403)
T 3cog_A 202 -L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT-----LHV 265 (403)
T ss_dssp -T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred -c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHH
Confidence 2 34589999999988765 5799999853 257777766543 4456677787777766664 333
Q ss_pred HHHHHHHHHHHHHHHhhcC--------------CCCCCCCCCC---ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE
Q 038416 283 IIGLLKETADICYERIKEI--------------PCITCPVKPQ---GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI 345 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (387)
+.++...+++.+.+.+++. |++.+. .+. .|.++.+.++. . .+....++++.||.
T Consensus 266 r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~~~l~~-------~-~~~~~~~l~~~~i~ 336 (403)
T 3cog_A 266 RMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVTFYIKG-------T-LQHAEIFLKNLKLF 336 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEEEEESS-------C-HHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEEEEecC-------C-HHHHHHHHHhCCcc
Confidence 4444555555555554433 232211 111 13344445642 1 23445556777875
Q ss_pred EEc---CC----------cc------------CC-CCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 346 ILP---GR----------TV------------GM-KNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 346 v~~---g~----------~~------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
+.. |+ .+ +. ++++|+|++. ++.++.++.|.+++++..
T Consensus 337 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 337 TLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp EECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHC
T ss_pred eEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHhh
Confidence 542 21 11 22 5789999987 444555666666665543
No 195
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=5e-27 Score=219.30 Aligned_cols=320 Identities=13% Similarity=0.061 Sum_probs=217.0
Q ss_pred cHHHHHHHHHHhcCCCCCCC------CCCCCcHHHH----HHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 27 STVAEDAVVDALRTAHYNCY------SPTLGVPSAR----RGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y------~~~~~~~~lr----~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
++.+.+++.+.+.+....+| +......+++ +.+++++ +.+++.+++++ |++++..++.+++++
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~~i~~~s-Gt~a~~~a~~~~~~~ 108 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHANVQPHS-GAQANMAVYFTVLEH 108 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEECCCSS-HHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceEEEecC-cHHHHHHHHHHhcCC
Confidence 99999999998853211122 1111234555 4666666 23333333455 599999999999999
Q ss_pred CCeEEEcCCCCcchHH-H--hhccCCCc--eeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHH
Q 038416 97 GANILIPRPGYPLYEI-H--AAGSNNNL--EARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHL 170 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~-~--~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~ 170 (387)
||+|+++.|+|..+.. . +. ..|. ++..+++++ .++.+|++++++++++ +++++++ +|+|. |...+ +
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~---l 180 (405)
T 2vi8_A 109 GDTVLGMNLSHGGHLTHGSPVN--FSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIID---F 180 (405)
T ss_dssp TCEEEEECGGGTCCTTTTCTTS--HHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCC---H
T ss_pred CCEEEEecccccchhcccchhh--hccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCC---H
Confidence 9999999999987643 1 12 2333 566666532 3567899999999876 7787776 55443 44434 8
Q ss_pred HHHHHHHHhcCcEEeeccccccccc-CCCCCccccccCCCccEEEEecCccccc-ccccceEEEEeeCCCCcccchhHHH
Q 038416 171 QKIARTARNLGIIVIADEVYNHLAF-GSTPYVPMGVFGSIVPVITLGSISKRWI-VPGWRLGWLVTSDPNGILQNSGFVD 248 (387)
Q Consensus 171 ~~l~~~~~~~~~~li~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~s~sK~~~-~~g~r~G~i~~~~~~~~~~~~~~~~ 248 (387)
++|.++|+++|+++|+|++|+.... .+..... +.. ..+++.|+||+++ +.| ||+++++ ++++
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~~--~di~~~s~sK~~~g~~g---G~~~~~~--------~~~~ 244 (405)
T 2vi8_A 181 AKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VPY--AHFVTTTTHKTLRGPRG---GMILCQE--------QFAK 244 (405)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TTT--CSEEEEESSSTTCCCSC---EEEEECH--------HHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCcCCCc---ccc--CCEEEEeccccCCCCCC---eEEEEcH--------HHHH
Confidence 9999999999999999999994322 2211111 111 2288899999986 555 9999875 6777
Q ss_pred HHHhhhh-cc-CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEEecCcccc
Q 038416 249 SIKGCLN-AA-SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-QGAMFVMVKLNVSML 325 (387)
Q Consensus 249 ~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 325 (387)
.+..... .. +++++....++..+++...+.++++..++++++++++.+.|+++ ++.+. .| ..++++|+.++...
T Consensus 245 ~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~- 321 (405)
T 2vi8_A 245 QIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-SGGTDNHLLLVDLRPQQ- 321 (405)
T ss_dssp HHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECGGGT-
T ss_pred HHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCCceEEEEEccCCC-
Confidence 7765532 22 23345455555556654333577888999999999999999988 77744 33 46788898886321
Q ss_pred cCCCcHHHHHHHHHHhcCeEEEcCCc----cC--CCCeEEEEee------CChHhHHHHHHHHHHHHHHhh
Q 038416 326 EDIGDDLEFCLKLAKEESVIILPGRT----VG--MKNWLRIAFA------AEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~----~~--~~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~~~ 384 (387)
.+..++...+ .++||.+.+|.. +. ..+++|++++ .+++++++++++|++++++..
T Consensus 322 ---~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 322 ---LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp ---CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred ---CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 1345565555 677999998752 21 2568999996 379999999999999887654
No 196
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.95 E-value=3.5e-27 Score=222.03 Aligned_cols=327 Identities=14% Similarity=0.071 Sum_probs=199.7
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.......|+. ....+|++.+++++ + ..+++++++|++++++.+++... .+++.|++.
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~ 141 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKF 141 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 58999999999987643223432 23345555555544 2 46899999999999999998653 355789999
Q ss_pred CCCCcchHHHhhccCCCceee--eeccCCC-------C--C-ccCChhhHHHhhcc--CceEEEEeCCCCC-ccccC-CH
Q 038416 104 RPGYPLYEIHAAGSNNNLEAR--HYDLLPE-------K--R-WEVDLDGVEALADE--NTVAIVIINPGNP-CGNVF-SY 167 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~--~~~~~~~-------~--~-~~~~~~~l~~~~~~--~~~~v~l~~p~np-tG~~~-~~ 167 (387)
.++|+++..... ...+.... ..+.... . . ..-|+++|+++++. ...++++++|+|+ +|... +.
T Consensus 142 ~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~ 220 (429)
T 4e77_A 142 EGCYHGHADCLL-VKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLP 220 (429)
T ss_dssp TTCCCC-------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCT
T ss_pred cCccCCCChhhh-hhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCH
Confidence 999987654211 01110000 0000000 0 0 01178999998864 3455666777654 45443 45
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+.+++|.++|++||+++|+||+|+++ ..+... ....+....+ +.|+||.++ +|+|+||+++++ +++
T Consensus 221 ~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~~~--------~~~ 286 (429)
T 4e77_A 221 EFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-AQDYYHVIPD---LTCLGKIIG-GGMPVGAFGGRR--------EVM 286 (429)
T ss_dssp THHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-HHHHTTCCCS---EEEEEGGGG-TTSCCEEEEECH--------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-HHHhcCCCCC---eeeeccccc-CCCCeEEEEECH--------HHH
Confidence 66999999999999999999999987 444321 1112221111 348999987 799999999875 677
Q ss_pred HHHHhh----hhccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCc
Q 038416 248 DSIKGC----LNAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNV 322 (387)
Q Consensus 248 ~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 322 (387)
+.+... ...+++.+++++.++.++|+... +..+++..+.....++.+.+.+..++ +. ...+..|.++++.++.
T Consensus 287 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~-~~~~~~g~~~~~~~~~ 364 (429)
T 4e77_A 287 NALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN-IP-LVVNHVGGMFGLFFTN 364 (429)
T ss_dssp TTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CC-CEEEEETTEEEEECCS
T ss_pred HHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-Cc-eEEEEeeeEEEEEEcc
Confidence 666542 22345788889888888877432 22233333333333444444333343 22 1134557788888764
Q ss_pred cc-cc--------CCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHH
Q 038416 323 SM-LE--------DIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 323 ~~-~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~ 382 (387)
.. .. +.....++...+ .++||.+.++. ...+|+++..+++++++++++|++++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 365 ADTVTCYQDVMNCDVERFKRFFHLM-LEEGVYLAPSA----FEAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp SSCCCSHHHHHTSCHHHHHHHHHHH-HHTTEECCSST----TSCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccccHHHHHHHHHHH-HHCCeEEeecC----CCCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 21 00 000124566666 45699999874 3457777778999999999999998764
No 197
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=7.3e-26 Score=217.19 Aligned_cols=330 Identities=12% Similarity=0.031 Sum_probs=224.0
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC--------CC-----C
Q 038416 32 DAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR--------PG-----A 98 (387)
Q Consensus 32 ~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g-----~ 98 (387)
+.+..... .+...|.......++++.+.+++.+.+|.+.+.+++++|+|+++++..++.++.. +| +
T Consensus 111 ~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTAN-TNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHC-CBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhc-cCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 34444333 3333555545556778888777777766544467999999999999999988752 56 6
Q ss_pred -eEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCccccCCHH
Q 038416 99 -NILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQ 168 (387)
Q Consensus 99 -~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~ 168 (387)
.|+++.++|+++...+. ..|. +++.+|++ .++.+|+++|++++++ ++++|++++|+||||.+.+
T Consensus 190 ~~v~~s~~~h~s~~~~~~--~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~-- 263 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGA--ALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP-- 263 (504)
T ss_dssp EEEEEETTSCTHHHHHHH--HTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC--
T ss_pred eEEEECCcchHHHHHHHH--HcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC--
Confidence 78899999999998888 7766 78888874 3578999999999875 5789999999999999966
Q ss_pred HHHHHHHHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHH
Q 038416 169 HLQKIARTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFV 247 (387)
Q Consensus 169 ~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~ 247 (387)
+++|+++|+++|+++++|++|+++.+...... .+..+. ...+++.+++|+++.| .++|+++++++. +.
T Consensus 264 -l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~ 332 (504)
T 2okj_A 264 -IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------IL 332 (504)
T ss_dssp -HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------HH
T ss_pred -HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECHH-------HH
Confidence 88999999999999999999998765432221 222221 1126678899997655 689999997632 33
Q ss_pred HHHHhh-hh-c-cC-------------------CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 248 DSIKGC-LN-A-AS-------------------HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 248 ~~~~~~-~~-~-~~-------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+..... .. . .. ....+.++++..++. ...+.+..++..++++++.+.|+++|+++
T Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 409 (504)
T 2okj_A 333 QGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFE 409 (504)
T ss_dssp HHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 322111 00 0 00 012344444444443 46688888999999999999999988888
Q ss_pred CCC--CCCceEEEEEecCcccc--cCC--------CcHHHHHHHHHHhcCeEEEcCCccCC-CCeEEEEee---CChHhH
Q 038416 306 CPV--KPQGAMFVMVKLNVSML--EDI--------GDDLEFCLKLAKEESVIILPGRTVGM-KNWLRIAFA---AEPATL 369 (387)
Q Consensus 306 ~~~--~~~~g~~~~~~~~~~~~--~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~Ri~~~---~~~e~~ 369 (387)
++. .|..++++|...+.... ... ....++...+. +.|+.+..+..+.. .+++|++++ ++++++
T Consensus 410 ~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi 488 (504)
T 2okj_A 410 MVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDI 488 (504)
T ss_dssp ESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHH
T ss_pred EEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHH
Confidence 654 36667666544442100 000 00234555554 45754433222322 368999996 589999
Q ss_pred HHHHHHHHHHHHHh
Q 038416 370 EDGLERIKAFCQRH 383 (387)
Q Consensus 370 ~~~~~~l~~~~~~~ 383 (387)
+.+++.|+++++++
T Consensus 489 ~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 489 DFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 198
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.95 E-value=9.7e-27 Score=218.38 Aligned_cols=329 Identities=13% Similarity=0.020 Sum_probs=207.4
Q ss_pred CcHHHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCe
Q 038416 26 DSTVAEDAVVDALRTAHYNC------YSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN 99 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~ 99 (387)
.++.+.+++.+++.+....+ |+.......+++...+++.+.+ +.+++.|++++ |++++..++.+++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~~v~~~s-Gs~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF--GADYANVQPHS-GSQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHH--TCSEEECCCSS-HHHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHh--CCCCceeEecC-cHHHHHHHHHHhcCCCCE
Confidence 68999999999885432112 2222222344433333333333 34555565555 488999999999999999
Q ss_pred EEEcCCCCcchH---HHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 100 ILIPRPGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 100 vl~~~p~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
|+++.|+|.++. .... ..|..+..+++..+.++.+|+++|++++++ ++++|++++|+||+ ..+ +++|.+
T Consensus 119 v~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~ 191 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVN--FSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMRE 191 (420)
T ss_dssp EEEEEEC--------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHH
T ss_pred EEecchhhcceeccchhhh--hcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHH
Confidence 999999997743 2222 334444433332234567899999999976 58999998999864 444 889999
Q ss_pred HHHhcCcEEeecccccc-cccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 176 TARNLGIIVIADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
+|++||+++|+|++|+. +...+.....+.. ..+++.|+||+++ |.+.||+++++.- +++.+.+....
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~ 259 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVPH-----AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV 259 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTTT-----SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCcchhceecccCCccccc-----CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence 99999999999999863 3333322222221 2388999999974 5556999986410 13555555432
Q ss_pred h--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHH
Q 038416 255 N--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDL 332 (387)
Q Consensus 255 ~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (387)
. ...+++...+.++..++....+..+++..+++.++++.+.+.|++. ++.++..+..++++|+.++... .+.
T Consensus 260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~- 333 (420)
T 3gbx_A 260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----LTG- 333 (420)
T ss_dssp C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCH-
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC----CCH-
Confidence 2 1223444445554444443334567888899999999999999885 6774422356778888775321 133
Q ss_pred HHHHHHHHhcCeEEEc-------CCccCCCCeEEEEee------CChHhHHHHHHHHHHHHHHh
Q 038416 333 EFCLKLAKEESVIILP-------GRTVGMKNWLRIAFA------AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 333 ~~~~~ll~~~gi~v~~-------g~~~~~~~~~Ri~~~------~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.+..+++++||.+.+ |..|. ...+||++. .++++++++++.|++++++.
T Consensus 334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 334 KEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp HHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 4445555778999998 33332 356999993 35789999999999888653
No 199
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.95 E-value=2.5e-27 Score=225.51 Aligned_cols=329 Identities=15% Similarity=0.133 Sum_probs=209.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC-----C----C
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP-----G----A 98 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-----g----~ 98 (387)
+.+.+++.+++.... ..|+...+..+||+.+++++. .+++++|+|+++|+..++.++.++ | |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 778888888876532 357666677899999999982 378999999999999999999887 8 9
Q ss_pred eEEEcCCCCc-chHHHhhccCCCceeeeec----cCCC----CCccCChhhHHHhhc----cCceEEEEeCCCCCc-ccc
Q 038416 99 NILIPRPGYP-LYEIHAAGSNNNLEARHYD----LLPE----KRWEVDLDGVEALAD----ENTVAIVIINPGNPC-GNV 164 (387)
Q Consensus 99 ~vl~~~p~~~-~~~~~~~~~~~g~~~~~~~----~~~~----~~~~~~~~~l~~~~~----~~~~~v~l~~p~npt-G~~ 164 (387)
+|++. +.|+ .+..... ..|..+.... ++.. .++.+|+++|+++++ +++++|++++|+||+ |.+
T Consensus 124 ~Ii~~-~~h~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~ 200 (467)
T 2oqx_A 124 MVAFS-NYFFDTTQGHSQ--INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQP 200 (467)
T ss_dssp CEEEE-SSCCHHHHHHHH--HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBC
T ss_pred eEEec-ccccccchhhhh--ccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCcc
Confidence 88877 4443 3333333 3444433221 1111 234679999999997 378999999999997 899
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccc----------cccCCCCCccccc--cCCCccEEEEecCccccccc-ccceEE
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNH----------LAFGSTPYVPMGV--FGSIVPVITLGSISKRWIVP-GWRLGW 231 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~i~s~sK~~~~~-g~r~G~ 231 (387)
++.+++++|.++|++||+++|+|+++.. ..+.+.....+.. ... .. +++.|+||.++++ | ||
T Consensus 201 ~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~-~d-~~~~s~sK~~g~~~G---g~ 275 (467)
T 2oqx_A 201 VSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKY-AD-MLAMSAKKDAMVPMG---GL 275 (467)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGG-CS-EEEEESSSTTCCSSC---EE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhcc-CC-eEEEecccccCCCCc---eE
Confidence 9999999999999999999999976643 1233322212210 011 11 4578999998766 3 77
Q ss_pred EEeeCCCCcccchhHHHHHHhhh--hc----cCCcchHHHHHHHHHhhhccHHHH-HHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 232 LVTSDPNGILQNSGFVDSIKGCL--NA----ASHPVTFIQAAVPRIVDETNEAFF-AKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 232 i~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
+++++.. +. +....++... .. ....+.....++...+.. ++ ++..++..++++.+.+.|+++ ++
T Consensus 276 ~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~ 346 (467)
T 2oqx_A 276 LCMKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GV 346 (467)
T ss_dssp EEECSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred EEecChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 7776510 00 1333333321 10 111122222222222221 11 123344567788888888887 77
Q ss_pred CCCCCCCceEEEEEecCc--ccccCCC-cHHHHHHHHHHhcCeEEEcCCcc--C-----------CCCeEEEEee---CC
Q 038416 305 TCPVKPQGAMFVMVKLNV--SMLEDIG-DDLEFCLKLAKEESVIILPGRTV--G-----------MKNWLRIAFA---AE 365 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~--~~~~~~~-~~~~~~~~ll~~~gi~v~~g~~~--~-----------~~~~~Ri~~~---~~ 365 (387)
.+. |.+++++|+.++. ....... +...+...++.++||.+.|++.| + ..+++|++++ .+
T Consensus 347 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t 424 (467)
T 2oqx_A 347 VCQ--QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYT 424 (467)
T ss_dssp CEE--EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSC
T ss_pred eee--cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCC
Confidence 733 6678888888742 1111000 13344666647789999985532 1 1378999996 78
Q ss_pred hHhHHHHHHHHHHHHHHhh
Q 038416 366 PATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 366 ~e~~~~~~~~l~~~~~~~~ 384 (387)
++++++++++|++++++..
T Consensus 425 ~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 425 QTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 9999999999999987654
No 200
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=3.7e-27 Score=218.18 Aligned_cols=300 Identities=13% Similarity=0.115 Sum_probs=208.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH--HHhhccCCC--ceeeeeccC
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE--IHAAGSNNN--LEARHYDLL 129 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~--~~~~~~~~g--~~~~~~~~~ 129 (387)
++.+.+++.+.+.++ .+ +.+++|+|+++++++++..+ ++||+|+++.++|+++. ..+. ..| .++..++.+
T Consensus 35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~ 108 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILE--KGKFAKSSTVLTAE 108 (379)
T ss_dssp HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHH--HHCCSSEEEEEECE
T ss_pred HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHH--HhCCCCceEEEecc
Confidence 444444444444433 23 68889999999999988654 68999999999998643 3344 445 366666653
Q ss_pred CC------CC-ccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCc
Q 038416 130 PE------KR-WEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYV 201 (387)
Q Consensus 130 ~~------~~-~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~ 201 (387)
.. .. ..+|+++++++++ +++++|++++++|+||..++.+++++|.++|+++|+++|+|++++ . + ...
T Consensus 109 ~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~ 183 (379)
T 3ke3_A 109 RTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWL 183 (379)
T ss_dssp ESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCC
T ss_pred ccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccc
Confidence 21 11 2479999999985 478999999999999999999999999999999999999999986 2 2 122
Q ss_pred cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-------------------h----ccC
Q 038416 202 PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-------------------N----AAS 258 (387)
Q Consensus 202 ~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-------------------~----~~~ 258 (387)
.+..+.. .+++.|++|+++.+ .++|++++++ ++++.+.... . +.+
T Consensus 184 ~~~~~~~---d~~~~s~~K~l~~~-~g~g~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 251 (379)
T 3ke3_A 184 DMKELGI---DVLISAPQKGWSST-PCAGLVMLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHA 251 (379)
T ss_dssp CHHHHTC---SEEEECTTTTTCSC-CCEEEEEECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSS
T ss_pred cccccCC---CEEEecchhhcCCC-CceEEEEECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCC
Confidence 2222222 37888999986432 3489999875 4555544210 0 123
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEEecCcccccCCCcHHHHHH
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ--GAMFVMVKLNVSMLEDIGDDLEFCL 336 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~ 336 (387)
+++...+.++.++++...+..++++.++.+++++++++.|+++ ++.+...+. ......+.++. ....+..
T Consensus 252 t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~ 323 (379)
T 3ke3_A 252 TMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------DDMHKGS 323 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------HHHHSSH
T ss_pred CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------cchHHHH
Confidence 6777777788777775444457888889999999999999988 677442221 12222222321 1122233
Q ss_pred HHHHhcCeEEEcCCccCC-----CCeEEEEee--CChHhHHHHHHHHHHHHHHhhh
Q 038416 337 KLAKEESVIILPGRTVGM-----KNWLRIAFA--AEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 337 ~ll~~~gi~v~~g~~~~~-----~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+.++||.+.+|..+.. .+.+||++. .+++++++++++|+++++++..
T Consensus 324 -~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~~ 378 (379)
T 3ke3_A 324 -AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVLA 378 (379)
T ss_dssp -HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred -HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44677999999876532 578999994 5789999999999999988753
No 201
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=1.8e-26 Score=212.71 Aligned_cols=304 Identities=18% Similarity=0.182 Sum_probs=217.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEEc
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILIP 103 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~~ 103 (387)
+.++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++|+..++.++ .++||+|+++
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~ 81 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITP 81 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence 45678888888887654 34444578899999999993 348999999999999999999 8999999999
Q ss_pred CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 104 RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
.++|.++...+. ..|.+++.++++++ ++.+|++++++++++++++|+ |+||+|...+ +++|.++|+++|++
T Consensus 82 ~~~~~~~~~~~~--~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~ 152 (367)
T 3nyt_A 82 GFTYVATAETVA--LLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIP 152 (367)
T ss_dssp SSSCTHHHHHHH--HTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCC
T ss_pred CCccHHHHHHHH--HcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCE
Confidence 999999999999 99999999988643 368899999999988888777 7889998765 88899999999999
Q ss_pred Eeecccccc-cccCCCCCccccccCCCccEEEEecC--cccccccccceEEEEeeCCCCcccchhHHHHHHhhhhc----
Q 038416 184 VIADEVYNH-LAFGSTPYVPMGVFGSIVPVITLGSI--SKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA---- 256 (387)
Q Consensus 184 li~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~s~--sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~---- 256 (387)
+|+|++|+. ..+.+..... +. .+++.|| +|.++.+|. .|++++++ +++.+.++.....
T Consensus 153 li~D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~ 217 (367)
T 3nyt_A 153 VIEDAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDR 217 (367)
T ss_dssp BEEECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEE
T ss_pred EEEECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCc
Confidence 999999984 3333322221 22 2778887 899877566 78888854 2566666654321
Q ss_pred ---------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE----EEEEecCcc
Q 038416 257 ---------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAM----FVMVKLNVS 323 (387)
Q Consensus 257 ---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~----~~~~~~~~~ 323 (387)
+...++...+++...++. +++..++.+++++++.+.|+++ ++.....+..+. .+.+.++
T Consensus 218 ~~~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 289 (367)
T 3nyt_A 218 RYHHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD-- 289 (367)
T ss_dssp TTEECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS--
T ss_pred CceeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC--
Confidence 234455554444444432 4556667777778888888887 444332222221 1222332
Q ss_pred cccCCCcHHHHHHHHHHhcCeEEEcCCc--------cC--C----------CCeEEEEee--CChHhHHHHHHHHHH
Q 038416 324 MLEDIGDDLEFCLKLAKEESVIILPGRT--------VG--M----------KNWLRIAFA--AEPATLEDGLERIKA 378 (387)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~--------~~--~----------~~~~Ri~~~--~~~e~~~~~~~~l~~ 378 (387)
+..++...| +++||.+.++.. |. . ...+|++++ .+++|++.+++.|++
T Consensus 290 ------~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 290 ------NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp ------SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred ------CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 344565555 666998887642 10 0 246899884 589999999988865
No 202
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=1.1e-25 Score=215.72 Aligned_cols=337 Identities=13% Similarity=0.082 Sum_probs=226.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh----c-----
Q 038416 24 LSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL----A----- 94 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~----- 94 (387)
.+.++.+.+++.....+.+...|.......++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++ +
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence 45778888877666555433345544456788888888888777653 3378999999999999998873 2
Q ss_pred ----CC------CC-eEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhccC----ce--EEEE
Q 038416 95 ----RP------GA-NILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALADEN----TV--AIVI 154 (387)
Q Consensus 95 ----~~------g~-~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~--~v~l 154 (387)
++ |+ .|+++.++|+++...+. ..|. +++.+|++ .++.+|+++|+++++++ ++ +|++
T Consensus 189 ~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~--~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~ 264 (497)
T 2qma_A 189 HSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS--WMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVG 264 (497)
T ss_dssp CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH--HTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEE
T ss_pred cchhhcccccccCCeEEEECCCchHHHHHHHH--HcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEE
Confidence 12 45 79999999999988888 7765 68888874 45689999999988653 44 7888
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEE
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
++++||||...+ +++|+++|++||+++|+|++|+.+..... ... +..+. ...+++.|++|+++.+ .++|+++
T Consensus 265 ~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~ 337 (497)
T 2qma_A 265 TAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALL 337 (497)
T ss_dssp EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEE
T ss_pred cCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc--cCCEEEEcchhccCCC-cceEEEE
Confidence 899999999865 88999999999999999999998765433 211 22221 1126677899997665 6899999
Q ss_pred eeCCCCcccchhHHHHHHh---hhhccC--CcchHH----------HHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh
Q 038416 234 TSDPNGILQNSGFVDSIKG---CLNAAS--HPVTFI----------QAAVPRIVDETNEAFFAKIIGLLKETADICYERI 298 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (387)
++++. .++.+.. +..... .++... ...+...+.....+.+.+..++..++++++.+.|
T Consensus 338 ~~~~~-------~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 410 (497)
T 2qma_A 338 VNDKS-------NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMI 410 (497)
T ss_dssp ESCGG-------GGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHH-------HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 97632 1111111 000000 011110 1111122333345678888899999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEEecCcccccCCCc--HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe---eCChHhHHHHH
Q 038416 299 KEIPCITCPVKPQGAMFVMVKLNVSMLEDIGD--DLEFCLKLAKEESVIILPGRTVGMKNWLRIAF---AAEPATLEDGL 373 (387)
Q Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~---~~~~e~~~~~~ 373 (387)
+++++++++..|..+ ++++++..... ..+ ..++...+ .+.|+.+.++..+....++|+++ .++++++++++
T Consensus 411 ~~~~~~~~~~~~~~~-~v~f~~~~~~~--~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~ 486 (497)
T 2qma_A 411 RTNDQFELLAEPSLS-TVLFRATHETA--DLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLL 486 (497)
T ss_dssp HTCTTEEECSCCSSS-EEEEEECCSSS--CHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHH
T ss_pred hhCCCeEEEcCCCce-EEEEEEcCCcc--CHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHH
Confidence 998888855455554 55556542110 000 12344444 55688877655454457899998 35899999999
Q ss_pred HHHHHHHHHh
Q 038416 374 ERIKAFCQRH 383 (387)
Q Consensus 374 ~~l~~~~~~~ 383 (387)
+.|+++++++
T Consensus 487 ~~l~~~~~~~ 496 (497)
T 2qma_A 487 SKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 203
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=2.3e-26 Score=212.16 Aligned_cols=318 Identities=12% Similarity=0.087 Sum_probs=218.3
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH-HHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCC
Q 038416 20 GVSLLSDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGI-ADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPG 97 (387)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~i-a~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g 97 (387)
..|+++.++.+.+++.+.+....+..|+ ....++|+.+ +++++ ..+++++++|+++|+..++.++ +++|
T Consensus 8 ~~p~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~G 78 (377)
T 3ju7_A 8 LRASTVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKG 78 (377)
T ss_dssp CCCCCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTC
T ss_pred cCCCCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCc
Confidence 4559999999999999999875432233 3468999999 99882 2568899999999999999998 8999
Q ss_pred CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh-ccC--ceEEEEeCCCCCccccCCHHHHHHHH
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA-DEN--TVAIVIINPGNPCGNVFSYQHLQKIA 174 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~l~~p~nptG~~~~~~~~~~l~ 174 (387)
|+|+++.|+|..+...+. ..|.+++.+++++ +++.+|++++++++ +++ +++|+ |+||+|...+ +++|.
T Consensus 79 d~Vi~~~~~~~~~~~~~~--~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~ 149 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAI--WCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYE 149 (377)
T ss_dssp CEEEEESSSCTHHHHHHH--HTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHH
T ss_pred CEEEECCCCcHHHHHHHH--HcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHH
Confidence 999999999999999999 9999999999864 46789999999988 566 88776 6778999877 78888
Q ss_pred HHHHhcCcEEeecccccccc-cCCCCCccc-cccCCCccEEEEecC--cccccccccceEEEEeeCCCCcccchhHHHHH
Q 038416 175 RTARNLGIIVIADEVYNHLA-FGSTPYVPM-GVFGSIVPVITLGSI--SKRWIVPGWRLGWLVTSDPNGILQNSGFVDSI 250 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~s~--sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~ 250 (387)
++|+ +|+++|+|++|+... +.+. ++ ..+ . .+.+.|| +|.++. | +.|++++++ +++.+++
T Consensus 150 ~la~-~~~~vi~D~a~a~g~~~~~~---~~g~~~-~---d~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~ 212 (377)
T 3ju7_A 150 ELEK-KGVPVVVDAAPGFGLMNGGM---HYGQDF-S---GMIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRI 212 (377)
T ss_dssp HHHH-TTCCBEEECTTCTTCEETTE---ETTTTC-S---SEEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHH
T ss_pred HHHh-cCCEEEEECCCccCCeECCE---eccCCC-C---cEEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHH
Confidence 8899 999999999998533 2211 11 111 1 1455565 688764 4 578888764 3567766
Q ss_pred Hhhhhc-------------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce---E
Q 038416 251 KGCLNA-------------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA---M 314 (387)
Q Consensus 251 ~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g---~ 314 (387)
+..+.. +...+.+..+.+...+ ..++.+.++.+++++.+.+.|++++++.....+..+ +
T Consensus 213 ~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 287 (377)
T 3ju7_A 213 KRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATM-----KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVI 287 (377)
T ss_dssp HHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBC
T ss_pred HHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcce
Confidence 655431 2233444333333333 335667777778888888888887654222122221 1
Q ss_pred --EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCc--cCC-------------------CCeEEEEee--CChHhH
Q 038416 315 --FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRT--VGM-------------------KNWLRIAFA--AEPATL 369 (387)
Q Consensus 315 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~-------------------~~~~Ri~~~--~~~e~~ 369 (387)
++.+.++.. .+..++...| +++||.+..+.. ++. ...+|+.++ .+++++
T Consensus 288 ~~~~~~~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di 361 (377)
T 3ju7_A 288 QQFMPILCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIV 361 (377)
T ss_dssp CSSEEEECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHH
T ss_pred EEEEEEEeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHH
Confidence 223344321 1245565555 677999887651 110 246888884 588999
Q ss_pred HHHHHHHHHHHHHh
Q 038416 370 EDGLERIKAFCQRH 383 (387)
Q Consensus 370 ~~~~~~l~~~~~~~ 383 (387)
+..++.|++++...
T Consensus 362 ~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 362 EQIVICLGQKVVSA 375 (377)
T ss_dssp HHHHHHHTC-----
T ss_pred HHHHHHHHHHHhcc
Confidence 99999998877653
No 204
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=5.1e-26 Score=217.42 Aligned_cols=333 Identities=11% Similarity=0.048 Sum_probs=228.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-------CCCEEEcCChHHHHHHHHHhhcCC---
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-------PEDVYLTLGCSQAIEISLSVLARP--- 96 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~--- 96 (387)
+..+.+++...+.. +...|....+..++++.+++++.+.+|.+.. ..++++|+|+|+|+..++.++..+
T Consensus 87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 34567777777643 3345655556789999999999888876532 356899999999999998776421
Q ss_pred ------CC--------e--EEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCce------EEEE
Q 038416 97 ------GA--------N--ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTV------AIVI 154 (387)
Q Consensus 97 ------g~--------~--vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~l 154 (387)
|| . |+++.++|+++...++ ..|++++.++++ .++.+|+++|+++++++++ +|++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~--~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 241 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGL--IGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVA 241 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHH--HHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHH--hCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 42 3 7789999999999999 899999999884 4678999999999977663 8899
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEE
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLV 233 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~ 233 (387)
++|+||||.+- ++++|+++|+++|+++++|++|+.+.+....... +..+.. .. .++.+++|+++.+ +++|+++
T Consensus 242 ~~~~n~tG~~~---~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-ad-si~~~~hK~~~~p-~~~G~l~ 315 (486)
T 1js3_A 242 TLGTTSCCSFD---NLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-AD-SFNFNPHKWLLVN-FDCSAMW 315 (486)
T ss_dssp EBSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEEEE
T ss_pred eCCCCCCCCCC---CHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-cC-eeEEchhhhcCCC-cceEEEE
Confidence 99999999984 4999999999999999999999976543222221 112211 12 4567899997665 7899999
Q ss_pred eeCCCCcccchhHHHHHH---hhhh------------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Q 038416 234 TSDPNGILQNSGFVDSIK---GCLN------------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETAD 292 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~---~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 292 (387)
++++.. +.+.+. .+.. .+.....+.++++...+ ..+++.++.++..++++
T Consensus 316 ~~~~~~------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~ 386 (486)
T 1js3_A 316 VKRRTD------LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSH 386 (486)
T ss_dssp ESCHHH------HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred EeCHHH------HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHH
Confidence 976210 122221 0000 00011223333333333 34678888999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhH
Q 038416 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATL 369 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~ 369 (387)
++.+.|+++|+++++..|..+.+ .++++... ....++...+.++ |+.+.++..+....++|+++. ++++++
T Consensus 387 ~l~~~L~~~~~~~~~~~~~~~~v-~f~~~~~~----~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di 460 (486)
T 1js3_A 387 EFEAFVLQDPRFEVCAEVTLGLV-CFRLKGSD----GLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESGHV 460 (486)
T ss_dssp HHHHHHHHCTTEEECSCCCSSEE-EEEESSCH----HHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHH
T ss_pred HHHHHHhcCCCeEEeCCCceeEE-EEEecChH----HHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHHHH
Confidence 99999999988886544554544 44553210 0134566666544 654433333444678999983 478999
Q ss_pred HHHHHHHHHHHHHhhh
Q 038416 370 EDGLERIKAFCQRHAK 385 (387)
Q Consensus 370 ~~~~~~l~~~~~~~~~ 385 (387)
++++++|+++++++.+
T Consensus 461 ~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 461 RLAWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999877653
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=2.5e-25 Score=213.10 Aligned_cols=336 Identities=11% Similarity=0.015 Sum_probs=228.3
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC------------
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR------------ 95 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~------------ 95 (387)
..+.+++..++.. ....|....+..++++.+++|+.+.+|.+.+.+.+++|+|+++++..++.++.+
T Consensus 110 ~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 110 GLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 3444666666654 344677767888999999999999888766667999999999999998887754
Q ss_pred --CCCeEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhccC------ceEEEEeCCCCCcccc
Q 038416 96 --PGANILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALADEN------TVAIVIINPGNPCGNV 164 (387)
Q Consensus 96 --~g~~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~ 164 (387)
+++.|+++.++|.++...++ ..|. ++..++.+ .++.+|+++|+++++++ +++|++++++|++|.+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~--~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGA--ALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHH--HTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cCCCeEEEECCCchHHHHHHHH--HcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 46789999999999999999 8888 78888875 35689999999999765 7889999999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
-+ +++|+++|++||+++++|++|+........... +.... .-.+++.+++|+++.+ ..+|+++++++.
T Consensus 265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~----- 333 (511)
T 3vp6_A 265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG----- 333 (511)
T ss_dssp CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-----
T ss_pred cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH-----
Confidence 44 899999999999999999999975543222211 11111 1136678999997655 668999887632
Q ss_pred hhHHHHHHhh----hh-c-------------cC-CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 244 SGFVDSIKGC----LN-A-------------AS-HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 244 ~~~~~~~~~~----~~-~-------------~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
+.+..... .. . .. ...++....+..++.....+++.++.++..++++++.+.|+++|++
T Consensus 334 --~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 334 --ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp --HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred --HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 33332111 00 0 00 0001112222233333345788999999999999999999999999
Q ss_pred CCCC--CCCceEEEEEecCcccccCCC-----------cHHHHHHHHHHhcCeEEEcCCc-cCCCCeEEEEee---CChH
Q 038416 305 TCPV--KPQGAMFVMVKLNVSMLEDIG-----------DDLEFCLKLAKEESVIILPGRT-VGMKNWLRIAFA---AEPA 367 (387)
Q Consensus 305 ~~~~--~~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~ll~~~gi~v~~g~~-~~~~~~~Ri~~~---~~~e 367 (387)
+++. .|..+.++|.-.+. ...+.. ...++...|.+ .|+.+..... .+..+++|+++. ++.+
T Consensus 412 ~l~~~~~p~~~~v~f~~~p~-~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~ 489 (511)
T 3vp6_A 412 EMVFNGEPEHTNVCFWYIPQ-SLRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQPQGDKANFFRMVISNPAATQS 489 (511)
T ss_dssp EESSSSCCSSSCEEEEECCG-GGSSCCCCHHHHHHHHHHHHHHHHHHHH-HTSCEEEEEEETTEEEEEEECCCCTTCCHH
T ss_pred EEEecCCCCeEEEEEEEeCc-cccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEEEEEeCCceEEEEEEecCCCCCHH
Confidence 8664 35555544432222 111100 01245555544 4754443111 111347999983 4789
Q ss_pred hHHHHHHHHHHHHHHh
Q 038416 368 TLEDGLERIKAFCQRH 383 (387)
Q Consensus 368 ~~~~~~~~l~~~~~~~ 383 (387)
+++.+++.|++.-+++
T Consensus 490 di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 490 DIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999998876553
No 206
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=3.1e-25 Score=206.37 Aligned_cols=312 Identities=13% Similarity=0.116 Sum_probs=212.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCC--cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-cCCCCeEEE
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLG--VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-ARPGANILI 102 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~g~~vl~ 102 (387)
.++.+.+++.+.+.. +|.+..| ..++|+.++++++ .+++++++|+++++..++.++ +++||+|++
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~ 77 (394)
T 1o69_A 10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLA 77 (394)
T ss_dssp --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEE
Confidence 456788888888865 2444346 8899999999993 278999999999999999999 899999999
Q ss_pred cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 103 PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
+.|+|+++...+. ..|.+++.++++ .++.+|++++++++++ ++++|++++ |+|...+ +++|.++|++
T Consensus 78 ~~~~~~~~~~~~~--~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~ 147 (394)
T 1o69_A 78 SSFTFIASVAPIC--YLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKE 147 (394)
T ss_dssp ESSSCGGGTHHHH--HTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHH
T ss_pred CCCccHHHHHHHH--HcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHH
Confidence 9999999999999 899999999885 4567899999999876 688898886 7897754 8899999999
Q ss_pred cCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccC
Q 038416 180 LGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAAS 258 (387)
Q Consensus 180 ~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (387)
+|+++|+|++|+ ++.+.+..... +. + +.+.|+||..+++|.++||+++++ +++++.++.......
T Consensus 148 ~~~~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~ 213 (394)
T 1o69_A 148 NDIVLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQAR 213 (394)
T ss_dssp TTCEEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCC
T ss_pred cCCEEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhcc
Confidence 999999999999 55554322111 11 1 445566444445677899999953 257777765432110
Q ss_pred -C--------------cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceE-EEEE
Q 038416 259 -H--------------PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQ----GAM-FVMV 318 (387)
Q Consensus 259 -~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~g~-~~~~ 318 (387)
. .++....++...+ +++++..++++++++++.+.|+++ +.+. .+. .++ ++++
T Consensus 214 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i 285 (394)
T 1o69_A 214 ENCLHYEHLDYGYNYRLSNVLGAIGVAQM-----EVLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTA 285 (394)
T ss_dssp CSSSSCCCSSCCCBCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEE
T ss_pred ccCccccccccCcccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEE
Confidence 0 1112222221112 235667788888899999988875 4422 221 222 2555
Q ss_pred ecCccc-------------ccC---CCcHHHHHHHHHHhcCeEEEcCCccC-----CC---------------CeEEEEe
Q 038416 319 KLNVSM-------------LED---IGDDLEFCLKLAKEESVIILPGRTVG-----MK---------------NWLRIAF 362 (387)
Q Consensus 319 ~~~~~~-------------~~~---~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~---------------~~~Ri~~ 362 (387)
.++... ..+ ..+..++...| .++||.+.+|..+. .. ..+|+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (394)
T 1o69_A 286 LINFDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS 364 (394)
T ss_dssp EESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC
T ss_pred EecchhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC
Confidence 665210 000 00234555555 66799999884220 01 2344444
Q ss_pred --eCChHhHHHHHHHHHHHHHH
Q 038416 363 --AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 363 --~~~~e~~~~~~~~l~~~~~~ 382 (387)
..+++|++.+++.|+++++.
T Consensus 365 ~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 365 GTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHHHHHHHhc
Confidence 25899999999999887643
No 207
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=1.5e-25 Score=207.93 Aligned_cols=285 Identities=15% Similarity=0.109 Sum_probs=197.7
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh---ccCCCceeeeec
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA---GSNNNLEARHYD 127 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~---~~~~g~~~~~~~ 127 (387)
...+|++.++++.. .+++++++|+++|+.. +..++++||+|+++.|+|++....+. ....|.++..++
T Consensus 68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 45778888888772 3467777888999998 56778999999999999996555443 003588888887
Q ss_pred cCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccC
Q 038416 128 LLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFG 207 (387)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 207 (387)
.. |++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+. .++. +
T Consensus 139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~~-~- 202 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----RPLS-L- 202 (400)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CGGG-G-
T ss_pred CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----Chhh-c-
Confidence 52 789999999999999999999999999987 889999999999999999999853322 1111 2
Q ss_pred CCccEEEEecCcccccccccceEE--EEeeCCCCcccchhHHHHHHhhhh-ccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 208 SIVPVITLGSISKRWIVPGWRLGW--LVTSDPNGILQNSGFVDSIKGCLN-AASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g~r~G~--i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
+..+++.|++|.++.+|.++|. ++..+ +++.+.++.... .+...++...+.+...++. +..+.
T Consensus 203 --g~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~ 268 (400)
T 3nmy_A 203 --GADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM 268 (400)
T ss_dssp --TCSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred --CCcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence 2348899999999888877766 44432 257777766543 4455666666665555554 55667
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc
Q 038416 285 GLLKETADICYERIKEIPCITCPVKPQ----------------GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP 348 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 348 (387)
++..++++.+.+.|++.|.+..+..|. .|.++++.++... .....++..+ +-.++.+..
T Consensus 269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~ 343 (400)
T 3nmy_A 269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEKT-ELFTLAESL 343 (400)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHHC-SSSEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHcC-CcceEecCC
Confidence 778888888989998877655443432 3667787775310 0122333332 333333344
Q ss_pred CCccC-----------------------CCCeEEEEeeCChHhHHHHHHHHHHHHH
Q 038416 349 GRTVG-----------------------MKNWLRIAFAAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 349 g~~~~-----------------------~~~~~Ri~~~~~~e~~~~~~~~l~~~~~ 381 (387)
|..+. .++.+|+|++. |+.+.+++.|.++++
T Consensus 344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl--e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI--EDLGDLRGDLERALV 397 (400)
T ss_dssp CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHC
T ss_pred CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHHh
Confidence 43221 14689999988 455666677777765
No 208
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=4.3e-25 Score=208.44 Aligned_cols=334 Identities=15% Similarity=0.056 Sum_probs=207.1
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCCCC---EEEcCChHHHHHHHHHhhcC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSPED---VYLTLGCSQAIEISLSVLAR 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~~~---i~~~~g~~~a~~~~~~~l~~ 95 (387)
++++.|.+++.+.+.+....+|+. .....++++...+++.+.+| .+.++ .++++|+++|+..++.++++
T Consensus 65 ~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~~sGt~An~~al~al~~ 142 (490)
T 2a7v_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQPYSGSPANLAVYTALLQ 142 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCCSSHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeCCchHHHHHHHHHHHcC
Confidence 479999999999887643223332 11234666444444444443 34432 35566889999999999999
Q ss_pred CCCeEEEcCCCCcchHH--------HhhccCCCcee--eeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCcccc
Q 038416 96 PGANILIPRPGYPLYEI--------HAAGSNNNLEA--RHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNV 164 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~--------~~~~~~~g~~~--~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~ 164 (387)
+||+|++..+.|.++.. .+. ..|..+ ..+++++ .++.+|++++++++. .++++|+++.++||+ .
T Consensus 143 pGD~Vl~~~~~h~g~l~h~~~~~~~~i~--~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~ 217 (490)
T 2a7v_A 143 PHDRIMGLDLPDGGHLTHGYMSDVKRIS--ATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--L 217 (490)
T ss_dssp SCEECCC---------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--C
T ss_pred CCCEecccCccccccccchhhhcchhHH--HcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--c
Confidence 99999999998865321 223 345433 3444433 346899999999885 468888888888875 3
Q ss_pred CCHHHHHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccc
Q 038416 165 FSYQHLQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQN 243 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~ 243 (387)
.+ +++|.++|+++|+++++|++|. ++...+....++. .. .+++.|+||++ .|.+.|++++++.. ..-+
T Consensus 218 ~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a---Div~~S~hK~l--~Gp~GG~i~~~~~~-~~~~ 286 (490)
T 2a7v_A 218 ID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA---DIVTTTTHKTL--RGARSGLIFYRKGV-KAVD 286 (490)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC---SEEEEESSGGG--CSCSCEEEEEECSE-EEEE
T ss_pred cc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC---CEEEECCcccC--ccccchheeeccch-hccc
Confidence 33 8899999999999999999976 4444443333432 12 27889999985 46678999998620 0000
Q ss_pred h--------hHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 038416 244 S--------GFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGA 313 (387)
Q Consensus 244 ~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 313 (387)
+ ++.+++++... ..++++.....++..++....+..+++..+++.++++++.+.|++. |+.++..+...
T Consensus 287 ~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t 365 (490)
T 2a7v_A 287 PKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDN 365 (490)
T ss_dssp TTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred ccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCC
Confidence 0 24555554432 1234555555555555554322345778889999999999999987 77754323445
Q ss_pred EEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-----CCCeEEEEe------eCChHhHHHHHHHHHHHHHH
Q 038416 314 MFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG-----MKNWLRIAF------AAEPATLEDGLERIKAFCQR 382 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~~Ri~~------~~~~e~~~~~~~~l~~~~~~ 382 (387)
+++|+.+..... +..+ +..+|++.||.+..+..++ .+..+||+. +.++++++++++.|.++++.
T Consensus 366 ~lv~vdl~~~g~----~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 366 HLVLVDLRPKGL----DGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp SEEEEECTTTTC----CHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCC----CHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 678888754221 3444 4555678899998643332 246899987 24789999999999888764
No 209
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.94 E-value=9.4e-25 Score=207.38 Aligned_cols=342 Identities=10% Similarity=0.021 Sum_probs=228.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC-------CCEEEcCChHHHHHHHHHhhcC-----
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP-------EDVYLTLGCSQAIEISLSVLAR----- 95 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~-------~~i~~~~g~~~a~~~~~~~l~~----- 95 (387)
..+.+.+...+.. +...|....+..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+...
T Consensus 88 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIAC-IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHCC-CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCc-cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 3444555555543 34467766778899999999999988765321 3688999999999888877631
Q ss_pred --------------CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC------ceEEEEe
Q 038416 96 --------------PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN------TVAIVII 155 (387)
Q Consensus 96 --------------~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~ 155 (387)
+++.|+++.++|.++...+. ..|.+++.++++ .++ +|+++|+++++++ +.+|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~--~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~ 241 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGL--LGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVT 241 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHH--HHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHH--HcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEE
Confidence 23579999999999999999 899999999885 345 9999999998764 5678888
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
.++|++|.+-+ +++|+++|++||+++++|++|+...+....... +..+. .-..+..+++|+++.| ..+|++++
T Consensus 242 ~~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~p-~g~g~l~~ 315 (475)
T 3k40_A 242 LGTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE--SADSFNFNPHKWMLVN-FDCSAMWL 315 (475)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEE
T ss_pred ecCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc--cCCEEEECchhccCCC-CceEEEEE
Confidence 99999999955 899999999999999999999875432211111 11111 1126678899986544 55888888
Q ss_pred eCCCCccc----chhHHHHH-----HhhhhccC-CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 038416 235 SDPNGILQ----NSGFVDSI-----KGCLNAAS-HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCI 304 (387)
Q Consensus 235 ~~~~~~~~----~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 304 (387)
+++..+.. .+.++..- ........ ..-++....+..++.......+.++.++..++++++.+.|+++|++
T Consensus 316 ~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 395 (475)
T 3k40_A 316 KDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRF 395 (475)
T ss_dssp SSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred eCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 76432110 00011000 00000000 1111122222233333345678889999999999999999999999
Q ss_pred CCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhHHHHHHHHHHHHH
Q 038416 305 TCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 305 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~~~~~~~l~~~~~ 381 (387)
+++..+ ....++++++... ....++...+.++.++.+.|+... ...++|+++. +++++++.++++|+++.+
T Consensus 396 ~l~~~~-~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 396 ELAAEI-NMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIK-DVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp EESSCC-BTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEecCC-ceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 866434 4445566664211 124567777766644455554332 3578999984 478999999999999998
Q ss_pred HhhhcC
Q 038416 382 RHAKKQ 387 (387)
Q Consensus 382 ~~~~~~ 387 (387)
++.+.|
T Consensus 470 ~~~~~~ 475 (475)
T 3k40_A 470 EMEQEQ 475 (475)
T ss_dssp HHHTCC
T ss_pred HHhccC
Confidence 887653
No 210
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=6.6e-24 Score=203.99 Aligned_cols=334 Identities=12% Similarity=0.040 Sum_probs=218.3
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc-------C-CC
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA-------R-PG 97 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~-~g 97 (387)
.+..+...+.....+.+...|....+..++++.+.+++.+.+|. +.+++++|+|+|+++..++.++. + +|
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G 197 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG 197 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence 34444443333333333335555455566677766666665554 36799999999999999888863 2 56
Q ss_pred C------eEEEcCCCCcchHHHhhccCCCc---eeeeeccCCCCCccCChhhHHHhhcc------CceEEEEeCCCCCcc
Q 038416 98 A------NILIPRPGYPLYEIHAAGSNNNL---EARHYDLLPEKRWEVDLDGVEALADE------NTVAIVIINPGNPCG 162 (387)
Q Consensus 98 ~------~vl~~~p~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG 162 (387)
+ .|+++.++|+++...+. ..|. +++.+|++ .++.+|+++|++++++ ++++|++++|+|+||
T Consensus 198 ~~~~~~~~vl~s~~~h~s~~~~~~--~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG 273 (515)
T 2jis_A 198 LRTLPPLALFTSKECHYSIQKGAA--FLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLG 273 (515)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHH--HTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTC
T ss_pred ccccCCeEEEECCCccHHHHHHHH--HcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCC
Confidence 5 88999999999998888 7777 78888874 3567999999999875 478999999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc
Q 038416 163 NVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL 241 (387)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~ 241 (387)
.+.+ +++|+++|+++|+++|+|++|+.+......+.. +..+. ...+++.|++|+++.| .++|+++++++.
T Consensus 274 ~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~--- 344 (515)
T 2jis_A 274 AFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS--- 344 (515)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS---
T ss_pred CccC---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH---
Confidence 9976 889999999999999999999987654332221 22221 2237788999997644 568999998731
Q ss_pred cchhHHHHHH----hhh-h-----------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhh
Q 038416 242 QNSGFVDSIK----GCL-N-----------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 242 ~~~~~~~~~~----~~~-~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (387)
++.++.. .+. . .+.......++++...+ ....+.+..++..++++++.+.|+
T Consensus 345 ---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~ 418 (515)
T 2jis_A 345 ---NLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQ---GDQGLERRIDQAFVLARYLVEEMK 418 (515)
T ss_dssp ---CHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1333211 110 0 00001122333333333 346678888999999999999999
Q ss_pred cCCCCCCCCCCCceEEEEEecCcccccC---CCcH-H-------HHHHHHHHhcCeEEEcCCc-cCCCCeEEEEee---C
Q 038416 300 EIPCITCPVKPQGAMFVMVKLNVSMLED---IGDD-L-------EFCLKLAKEESVIILPGRT-VGMKNWLRIAFA---A 364 (387)
Q Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~-~-------~~~~~ll~~~gi~v~~g~~-~~~~~~~Ri~~~---~ 364 (387)
++|+++++..|..+.++|...+.. ..+ ..+. . .+...+ .+.|+....... .+..+++|++++ +
T Consensus 419 ~~~g~~~~~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~ 496 (515)
T 2jis_A 419 KREGFELVMEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSAL 496 (515)
T ss_dssp TSTTEEESSCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTC
T ss_pred cCCCEEEeCCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCC
Confidence 998888664455555544333321 100 0010 1 133344 455765432111 112468999994 6
Q ss_pred ChHhHHHHHHHHHHHHHH
Q 038416 365 EPATLEDGLERIKAFCQR 382 (387)
Q Consensus 365 ~~e~~~~~~~~l~~~~~~ 382 (387)
++++++.+++.|++++++
T Consensus 497 t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 497 TCADMDFLLNELERLGQD 514 (515)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 899999999999887654
No 211
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.3e-24 Score=206.95 Aligned_cols=332 Identities=11% Similarity=0.055 Sum_probs=229.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCC--------CCEEEcCChHHHHHHHHHhhcC---
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSP--------EDVYLTLGCSQAIEISLSVLAR--- 95 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~--------~~i~~~~g~~~a~~~~~~~l~~--- 95 (387)
+..+.+.+..++.. +...|....+..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+...
T Consensus 92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 44555566666654 34567777788999999999999988765322 3678999999999988887642
Q ss_pred ----------------CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccC------ceEEE
Q 038416 96 ----------------PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADEN------TVAIV 153 (387)
Q Consensus 96 ----------------~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~ 153 (387)
+++.|+++.++|.++...+. ..|.+++.++++ .++.+|+++|+++++++ +.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~--~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv 246 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGL--ISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVC 246 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHH--HHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHH--hCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 46789999999999999998 889999999874 46689999999998754 66788
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc-ccccCCCccEEEEecCcccccccccceEEE
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP-MGVFGSIVPVITLGSISKRWIVPGWRLGWL 232 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i 232 (387)
++.++|++|.+-+ +++|+++|++||+++++|++|+...+....... +..+. .-..+..+.+|+++.| ..+|++
T Consensus 247 ~~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~--~aDsi~~~~hK~l~~p-~g~g~l 320 (481)
T 4e1o_A 247 ATLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIE--YADSFTFNPSKWMMVH-FDCTGF 320 (481)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEE
T ss_pred EecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcc--cCCEEEEChHHhcCCC-CceEEE
Confidence 8899999999855 899999999999999999999875432221111 11111 1125667899997655 557888
Q ss_pred EeeCCCCcccchhHHHHHHh----hhh----------------ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Q 038416 233 VTSDPNGILQNSGFVDSIKG----CLN----------------AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETAD 292 (387)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~----~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 292 (387)
+++++. ....... +.. .+.....+.++++... ...+.+.++.++..++++
T Consensus 321 ~~~~~~-------~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~---~g~~g~~~~~~~~~~~a~ 390 (481)
T 4e1o_A 321 WVKDKY-------KLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRS---FGVKNLQAHVRHGTEMAK 390 (481)
T ss_dssp EESBHH-------HHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred EEeCHH-------HHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHH---hHHHHHHHHHHHHHHHHH
Confidence 876521 2111100 000 0000112233333333 335678889999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee---CChHhH
Q 038416 293 ICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA---AEPATL 369 (387)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~---~~~e~~ 369 (387)
++.+.|+++|++++. .+...++++++++... ....++...+.++..+.+.|+. .....++|+++. ++++++
T Consensus 391 ~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di 464 (481)
T 4e1o_A 391 YFESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDI 464 (481)
T ss_dssp HHHHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHH
T ss_pred HHHHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHH
Confidence 999999999999965 4444556676664311 1245666776555335555533 233468999984 378999
Q ss_pred HHHHHHHHHHHHHhhh
Q 038416 370 EDGLERIKAFCQRHAK 385 (387)
Q Consensus 370 ~~~~~~l~~~~~~~~~ 385 (387)
++++++|+++++++.+
T Consensus 465 ~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 465 LRDWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999887653
No 212
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=5.4e-24 Score=199.40 Aligned_cols=291 Identities=18% Similarity=0.122 Sum_probs=192.4
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHh----hccCCCceeeee
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHA----AGSNNNLEARHY 126 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~----~~~~~g~~~~~~ 126 (387)
...++|+.++++++ . ++.++++++++|+..++.+++++||+|+++.++|+++...+ . ..|.++..+
T Consensus 59 ~~~~l~~~la~~~g------~--~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~--~~g~~~~~~ 128 (421)
T 2ctz_A 59 TVDVLEKRLAALEG------G--KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLK--RLGIEVRFT 128 (421)
T ss_dssp HHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHH--HTTCEEEEC
T ss_pred HHHHHHHHHHHHhC------C--CceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH--HcCCEEEEE
Confidence 45789999999983 2 23455556699999999999999999999999999876654 6 689888887
Q ss_pred -ccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 127 -DLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 127 -~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
+.+ |++++++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|..+.+.+. ++ .
T Consensus 129 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~---~~-~ 194 (421)
T 2ctz_A 129 SREE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLR---PL-A 194 (421)
T ss_dssp CTTC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCC---GG-G
T ss_pred CCCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCC---cc-c
Confidence 642 789999999989999999999999999988 88999999999999999999932323222 22 2
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeC-CCCc-cc-chhH---------------------HHHHHh--hhhccCC
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSD-PNGI-LQ-NSGF---------------------VDSIKG--CLNAASH 259 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~-~~~~-~~-~~~~---------------------~~~~~~--~~~~~~~ 259 (387)
.. ..+++.|++|.++.+|.++|++++.+ ...+ .. .+.+ ....+. ....+..
T Consensus 195 ~~---~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~ 271 (421)
T 2ctz_A 195 WG---AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQA 271 (421)
T ss_dssp GT---CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCC
T ss_pred cC---CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCC
Confidence 22 23889999999999999999988863 1111 00 0001 111110 0112234
Q ss_pred cchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEEecCc
Q 038416 260 PVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKP-----------------QGAMFVMVKLNV 322 (387)
Q Consensus 260 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------------~~g~~~~~~~~~ 322 (387)
.++...+++...++. +..+.++..++++.+.+.|+++|++..+..| ..|.++.+.+..
T Consensus 272 ~~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 272 LGPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp CCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred CCHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC
Confidence 455544444444443 4455666668888999999988877643222 234455666642
Q ss_pred ccccCCCcHHHHHHHHHHhcCeEEEcCCcc----------------------CC-CCeEEEEeeCChHhHHHHHHHHHHH
Q 038416 323 SMLEDIGDDLEFCLKLAKEESVIILPGRTV----------------------GM-KNWLRIAFAAEPATLEDGLERIKAF 379 (387)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----------------------~~-~~~~Ri~~~~~~e~~~~~~~~l~~~ 379 (387)
.. .+...++..+ +..++.+..|... +. ++.+|+|++. |+++++++.|+++
T Consensus 347 ~~----~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~a 419 (421)
T 2ctz_A 347 GY----EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEA 419 (421)
T ss_dssp HH----HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred CH----HHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHH
Confidence 10 0112232222 2234344444211 11 3789999876 6888888888776
Q ss_pred H
Q 038416 380 C 380 (387)
Q Consensus 380 ~ 380 (387)
+
T Consensus 420 l 420 (421)
T 2ctz_A 420 L 420 (421)
T ss_dssp T
T ss_pred h
Confidence 5
No 213
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=1.4e-23 Score=197.92 Aligned_cols=311 Identities=16% Similarity=0.135 Sum_probs=211.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh---------cC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL---------AR 95 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---------~~ 95 (387)
..++.+.+++.+++... .|.+..+..++|+.++++++ . +++++++|+++++..++.++ ++
T Consensus 40 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~ 108 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLG------V--PYVLTTTSGSSANLLALTALTSPKLGVRALK 108 (437)
T ss_dssp CCCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCC
T ss_pred CCCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHC------C--CcEEEeCCHHHHHHHHHHHhhhcccccccCC
Confidence 45688999999888653 24344578999999999993 2 36788888899999999998 78
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
+||+|+++.|+|+++...+. ..|.+++.+++++ +++.+|++++++++++++++|++++ ++|... ++++|.+
T Consensus 109 ~gd~Vi~~~~~~~~~~~~~~--~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~---~~~~i~~ 179 (437)
T 3bb8_A 109 PGDEVITVAAGFPTTVNPTI--QNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAH---TLGNLF---DLAEVRR 179 (437)
T ss_dssp TTCEEEECSSSCHHHHHHHH--HTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEEC---GGGCCC---CHHHHHH
T ss_pred CcCEEEECCCCcHHHHHHHH--HcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeC---CCCChh---cHHHHHH
Confidence 99999999999999999999 8999999998864 2567899999999988899999885 234443 4889999
Q ss_pred HHHhcCcEEeecccccccc-cCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHH-HHHhh
Q 038416 176 TARNLGIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVD-SIKGC 253 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~-~~~~~ 253 (387)
+|+++|+++|+|++|+... +++. .+..+ .+ +++.||+|.++++|.+.|++++++ +.+. .+...
T Consensus 180 l~~~~~~~li~D~a~~~g~~~~~~---~~~~~-~d---~~~~s~~~~k~l~~g~gg~~~~~~--------~~~~~~~~~~ 244 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTYDGK---MAGTF-GD---IGTVSFYPAKHITMGEGGAVFTQS--------AELKSIIESF 244 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTE---ETTSS-SS---EEEEECSTTSSSCCSSCEEEEESC--------HHHHHHHHHH
T ss_pred HHHHcCCEEEEECccccCceECCe---ecccc-cC---EEEEECcCCcCCCCCCeEEEEeCC--------HHHHHHHHHH
Confidence 9999999999999998432 2211 11111 12 677889888888999999999875 2322 22211
Q ss_pred hhc----------------------------------------cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Q 038416 254 LNA----------------------------------------ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADI 293 (387)
Q Consensus 254 ~~~----------------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 293 (387)
... +...+++...++...++. +.+..++.++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~ 319 (437)
T 3bb8_A 245 RDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-----IEEFVEKRKANFKY 319 (437)
T ss_dssp HBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred HHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 100 001123333333333332 34455555777888
Q ss_pred HHHHhhcCCCCCCCCCC--C--ce--EEEE-EecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccC-------------
Q 038416 294 CYERIKEIPCITCPVKP--Q--GA--MFVM-VKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVG------------- 353 (387)
Q Consensus 294 ~~~~l~~~~~~~~~~~~--~--~g--~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------------- 353 (387)
+.+.|++++++...... . .+ .|.+ +..+. + .+..++...| .++||.+.++....
T Consensus 320 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~ 393 (437)
T 3bb8_A 320 LKDALQSCADFIELPEATENSDPSWFGFPITLKEDS----G-VSRIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYR 393 (437)
T ss_dssp HHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGG----S-SCHHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCE
T ss_pred HHHHhhccCCccccCCCCCCCceeeEEEEEEECCcC----c-CcHHHHHHHH-HHCCCceeccCCcccccCchhhccCcc
Confidence 88999888665422111 1 12 2222 33220 1 1355666666 56699998765310
Q ss_pred -C----------CCeEEEEee--CChHhHHHHHHHHHHHHH
Q 038416 354 -M----------KNWLRIAFA--AEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 354 -~----------~~~~Ri~~~--~~~e~~~~~~~~l~~~~~ 381 (387)
. .+.+|++++ .+++|++.+++.|+++++
T Consensus 394 ~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 394 VVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp ECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred ccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 0 124899884 589999999999987754
No 214
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1.1e-25 Score=212.13 Aligned_cols=286 Identities=10% Similarity=0.031 Sum_probs=186.7
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCC
Q 038416 51 GVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP 130 (387)
Q Consensus 51 ~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~ 130 (387)
...++++.+++ + + .+ +++++++|+++++..++.+++++||+|+++.|+|.++...+. ..|.+++.++...
T Consensus 58 ~~~~~~~~la~-~----g--~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~--~~G~~~~~v~~~~ 127 (446)
T 2x3l_A 58 VILKSMKQVEK-H----S--DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD--ISQQEGHFIETHQ 127 (446)
T ss_dssp HHHHHHHHHCS-C----T--TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH--HHTCCEEECEEEE
T ss_pred HHHHHHHHHHh-c----C--CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH--HcCCeEEEEeCee
Confidence 44566666666 5 2 33 689999999999999999999999999999999999998888 8899998888732
Q ss_pred CCC----ccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc-cccCCCCCccccc
Q 038416 131 EKR----WEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH-LAFGSTPYVPMGV 205 (387)
Q Consensus 131 ~~~----~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~ 205 (387)
.++ +.+|++++ +.++++++++++ .|++|.+++ +++|+++|+++|+++|+|++|+. +.|.+. ..+...
T Consensus 128 ~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~ 199 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLN 199 (446)
T ss_dssp CTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGG
T ss_pred ccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHH
Confidence 222 45778877 456789999999 456999988 78999999999999999999996 334443 222223
Q ss_pred cCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh--hccCCcchHHHHHHHHHhhhccHHHHHHH
Q 038416 206 FGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL--NAASHPVTFIQAAVPRIVDETNEAFFAKI 283 (387)
Q Consensus 206 ~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (387)
...+ +++.|+||++ .++.++||+++++. .. + ...+.... ...++++.....++..++....+...++.
T Consensus 200 ~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~--~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~ 269 (446)
T 2x3l_A 200 YQAD---YVVQSFHKTL-PALTMGSVLYIHKN--AP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLF 269 (446)
T ss_dssp GTCS---EEEECHHHHS-SSCTTCEEEEEETT--CT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHH
T ss_pred cCCC---EEEECCcccc-ccccccEEEEEcCC--cC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHH
Confidence 3332 8899999963 33345899999762 11 1 22333221 12334444444444433332111111224
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEE-cCCccCCCCeEEEEe
Q 038416 284 IGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIIL-PGRTVGMKNWLRIAF 362 (387)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~~Ri~~ 362 (387)
.++..++++.+++. ++.++ .+..+.++|+.++. .+..++...|.+ +||.+. +| .+++|+++
T Consensus 270 ~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g-----~~~iRi~~ 331 (446)
T 2x3l_A 270 FAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELAD-----DYQALAIL 331 (446)
T ss_dssp HHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEEC-----SSCEEEEC
T ss_pred HHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecC-----CCEEEEEe
Confidence 44455555555444 45433 23334467777751 145667666654 599987 54 36899999
Q ss_pred eC--ChHhHHHHHHHHHHHHHHh
Q 038416 363 AA--EPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 363 ~~--~~e~~~~~~~~l~~~~~~~ 383 (387)
+. +++++ +++++|+++++++
T Consensus 332 ~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 332 PLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp CCCCTTCCC-CHHHHHHHHHTCC
T ss_pred ecCCCHHHH-HHHHHHHHHHHhh
Confidence 64 78899 9999999887654
No 215
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=1.1e-23 Score=198.48 Aligned_cols=313 Identities=21% Similarity=0.188 Sum_probs=195.4
Q ss_pred CCCCcHHHHHHH--HHHhcCCCCCCCCC--CCC----cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-
Q 038416 23 LLSDSTVAEDAV--VDALRTAHYNCYSP--TLG----VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL- 93 (387)
Q Consensus 23 ~~~~~~~v~~a~--~~~~~~~~~~~y~~--~~~----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l- 93 (387)
+...|+.+.+++ ...... +..|.+ .++ ..++++.+++++ +.+++++++++|++.+++.+..++
T Consensus 75 ~~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~ 146 (438)
T 1wyu_A 75 SHHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELA------GLEIANASMYDGATALAEGVLLALR 146 (438)
T ss_dssp CCCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHh
Confidence 567777775554 222221 122211 233 345555666665 345678889999995444444432
Q ss_pred cCCCCeEEEcCCCCcchHHHhhc--cCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHH
Q 038416 94 ARPGANILIPRPGYPLYEIHAAG--SNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQ 171 (387)
Q Consensus 94 ~~~g~~vl~~~p~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~ 171 (387)
.++||+|+++.++|+.+...++. ...|++++.++. + ++.+|+++ +++++++|++++| ||||.+.+ ++
T Consensus 147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~--~-~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~---l~ 215 (438)
T 1wyu_A 147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL--E-GGRTPLPE----VGEEVGAVVVQNP-NFLGALED---LG 215 (438)
T ss_dssp HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC--B-TTBCCCCC----CCTTEEEEEEESS-CTTSBCCC---HH
T ss_pred cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC--c-CCccCHHH----hCCCeEEEEEECC-CCCeEEec---HH
Confidence 47899999999999988755430 048999998886 2 34677766 6778999999999 99999976 88
Q ss_pred HHHHHHHhcCcEEeeccc-ccccccCCCCCccccccCCCccEEEEecCccccc----ccccceEEEEeeCCCCcccchhH
Q 038416 172 KIARTARNLGIIVIADEV-YNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWI----VPGWRLGWLVTSDPNGILQNSGF 246 (387)
Q Consensus 172 ~l~~~~~~~~~~li~D~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~----~~g~r~G~i~~~~~~~~~~~~~~ 246 (387)
+|+++|+++|+++|+|.. .+ +. ... .+ ..+..+ +++.| +|.|+ +.|.++|++++++ ++
T Consensus 216 ~i~~la~~~g~~vivd~d~~a-~g--~~~-~~-~~~g~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~--------~~ 278 (438)
T 1wyu_A 216 PFAEAAHGAGALFVAVADPLS-LG--VLK-PP-GAYGAD---IAVGD-GQSLGLPMGFGGPHFGFLATKK--------AF 278 (438)
T ss_dssp HHHHHHHHTTCEEEEECCTTG-GG--TBC-CH-HHHTCS---EEEEE-CTTTTCCCGGGCSCCEEEEECG--------GG
T ss_pred HHHHHHHHcCCEEEEEechhh-cc--CcC-CC-ccCCCC---EEEEC-CcccCCCccCCCCCeeEEEEcH--------HH
Confidence 999999999999996522 22 11 101 11 223222 56666 55433 5567899999875 23
Q ss_pred HHHHH---------------------------hhhhccCCc-chHHHHHHH--HHhhhccHHHHHHHHHHHHHHHHHHHH
Q 038416 247 VDSIK---------------------------GCLNAASHP-VTFIQAAVP--RIVDETNEAFFAKIIGLLKETADICYE 296 (387)
Q Consensus 247 ~~~~~---------------------------~~~~~~~~~-~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (387)
++.+. +....+.+. +.....++. ..+.......+++..++..++++++.+
T Consensus 279 ~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~ 358 (438)
T 1wyu_A 279 VRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHA 358 (438)
T ss_dssp GGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 22221 000111111 011222222 224433445688888999999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEE--EcCCccCCCCeEEEEee--CChHhHHHH
Q 038416 297 RIKEIPCITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVII--LPGRTVGMKNWLRIAFA--AEPATLEDG 372 (387)
Q Consensus 297 ~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v--~~g~~~~~~~~~Ri~~~--~~~e~~~~~ 372 (387)
.|++++|+.+. .+. ..+.++.+... .+..++...|. ++||.+ .++..|. ++++||+++ .++++++++
T Consensus 359 ~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~ 429 (438)
T 1wyu_A 359 LLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLAL 429 (438)
T ss_dssp HHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHH
T ss_pred HHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHH
Confidence 99999888844 343 22322222211 14567777775 459998 6666554 689999996 689999999
Q ss_pred HHHHHHHH
Q 038416 373 LERIKAFC 380 (387)
Q Consensus 373 ~~~l~~~~ 380 (387)
++.|++++
T Consensus 430 ~~~l~~~l 437 (438)
T 1wyu_A 430 REALKEVL 437 (438)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998754
No 216
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.92 E-value=2.1e-24 Score=204.33 Aligned_cols=298 Identities=12% Similarity=0.090 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEcCChH-HHHHHHHHhhcC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccC
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLTLGCS-QAIEISLSVLAR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~-~a~~~~~~~l~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~ 129 (387)
.++++.+.+++.+.+|. +++ +++|+|++ .++..++.++.. +|+.|+++.++|.++...++ ..|+++..+++.
T Consensus 132 ~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~--~~G~~~~~v~~~ 206 (456)
T 2z67_A 132 YALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVS--FVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH--HTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHH--HcCCCceEEEEe
Confidence 44555566666665553 334 99999999 566655655443 67789999999999999999 899999988864
Q ss_pred C-CCCccCChhhHHHhh-c----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccc
Q 038416 130 P-EKRWEVDLDGVEALA-D----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 130 ~-~~~~~~~~~~l~~~~-~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
+ .+++.+|+++|++++ + .++.+|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+..+.. ....
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~-~~~~ 282 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYL-EKLK 282 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHH-HHHH
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhh-HHHH
Confidence 3 345789999999998 5 36677888999999999966 88889999999999999999986543110 0111
Q ss_pred cccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCC-cchHHHHHHHHHhhhccHHHHHH
Q 038416 204 GVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASH-PVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
..+.. ...+++.|++|++ .++.++|++++++ +++++.+......... .+...+.++ +.......+++
T Consensus 283 ~~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aa---l~~l~~~~~~~ 350 (456)
T 2z67_A 283 KAFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVS---LLSMGSKNYLE 350 (456)
T ss_dssp HHHTS-CCSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHH---HHHHHHHHHHH
T ss_pred HhhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHH---HHHHHHHHHHH
Confidence 11111 1126788999974 4558899999953 2466666433221111 112223332 23233466788
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCe---EEE------cCC
Q 038416 283 IIGLLKETADICYERIKEIP---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESV---IIL------PGR 350 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~------~g~ 350 (387)
..++..++++++.+.|++++ ++.+. .|. +++++.+... + ...++...|. ++|+ .+. +|.
T Consensus 351 ~~~~~~~~~~~l~~~L~~~~~~~g~~v~-~~~--~~v~~~~~~~---~--~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~ 421 (456)
T 2z67_A 351 LVKNQKNSKKLLDELLNDLSKKTGGKFL-DVE--SPIASCISVN---S--DPVEIAAKLY-NLRVTGPRGIKKTDHFGNC 421 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCBC-CCC--CSSEEEEECS---S--CHHHHHHHHH-HTTEESCEEECTTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCEec-CCC--CeEEEEEecc---c--HHHHHHHHHH-HcCCCcceEEeecCccccc
Confidence 88999999999999999875 66633 455 4555555110 0 1245666664 4564 443 133
Q ss_pred ccCC--CCeEEEEee--CChHhHHHHHHHHHHHH
Q 038416 351 TVGM--KNWLRIAFA--AEPATLEDGLERIKAFC 380 (387)
Q Consensus 351 ~~~~--~~~~Ri~~~--~~~e~~~~~~~~l~~~~ 380 (387)
.|.. .+++|++++ .+++++++++++|++++
T Consensus 422 ~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 422 YLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 2222 478999996 58999999999998654
No 217
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.92 E-value=1.9e-22 Score=187.38 Aligned_cols=307 Identities=15% Similarity=0.155 Sum_probs=207.0
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhh-------cCCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVL-------ARPG 97 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-------~~~g 97 (387)
..++.+.+++.+++... .|.+..+..++|+.++++++ . +++++++++++++..++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 57889999999988753 34445678899999999993 2 36788888889999999998 7889
Q ss_pred CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHH
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTA 177 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~ 177 (387)
|+|+++.|+|+++...+. ..|.+++.++++++ ++.+|+++|++++++++++|++++ ++|...+ +++|.++|
T Consensus 81 ~~Vi~~~~~~~~~~~~~~--~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~ 151 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQ--QYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKII 151 (390)
T ss_dssp CEEEEESSSCHHHHHHHH--HTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHH--HcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHH
Confidence 999999999999999999 89999999988643 468899999999988899998875 4566544 89999999
Q ss_pred HhcCcEEeecccccccc-cCCCCCccccccCCCccEEEEec--CcccccccccceEEEEeeCCCCcccchhHHHHHHhhh
Q 038416 178 RNLGIIVIADEVYNHLA-FGSTPYVPMGVFGSIVPVITLGS--ISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL 254 (387)
Q Consensus 178 ~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~s--~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 254 (387)
+++|+++|+|++|+... +.+ ..+.... .+...| .+|.++ +| +.|++++++ +++.+.++...
T Consensus 152 ~~~~~~li~D~a~~~g~~~~~------~~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~ 215 (390)
T 3b8x_A 152 GGRDIILLEDNCESMGATFNN------KCAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIR 215 (390)
T ss_dssp TTSCCEEEEECTTCTTCEETT------EETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHT
T ss_pred HHcCCEEEEECcCcccCEECC------ccccccc-ceEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHH
Confidence 99999999999999432 221 1111111 122222 234432 23 348888864 13444443322
Q ss_pred hcc--------------------------------CCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 038416 255 NAA--------------------------------SHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP 302 (387)
Q Consensus 255 ~~~--------------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (387)
... ...++....++...+ +.+++..++.+++++++.+.|+++|
T Consensus 216 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~ 290 (390)
T 3b8x_A 216 AHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHP 290 (390)
T ss_dssp BTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred hcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 100 113333333332223 4467788888899999999999887
Q ss_pred CCCCCCCC-CceE-EEEEecCcccccCCCcHHHHHHHHHHhcCeEEEc---CCccCC----------------------C
Q 038416 303 CITCPVKP-QGAM-FVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILP---GRTVGM----------------------K 355 (387)
Q Consensus 303 ~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~~~~----------------------~ 355 (387)
++.+...+ ...+ .+++.++... + .+..++...| .++||.+.+ |..+.. .
T Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~~~--~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (390)
T 3b8x_A 291 YLDVQQETGESSWFGFSFIIKKDS--G-VIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDK 366 (390)
T ss_dssp SEEECCCCSBCCCCEEEEEECTTS--C-CCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHH
T ss_pred CcccCCCCCCcccEEEEEEecCcC--c-ccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhc
Confidence 77643222 2222 2444554210 1 1345666665 667999886 322111 0
Q ss_pred CeEEEEee--CChHhHHHHHHHH
Q 038416 356 NWLRIAFA--AEPATLEDGLERI 376 (387)
Q Consensus 356 ~~~Ri~~~--~~~e~~~~~~~~l 376 (387)
+.+|++++ .+++|++.+++.|
T Consensus 367 ~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 367 NGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HEEEEECCSSCCHHHHHHHHHHT
T ss_pred CEEEeeCCCCCCHHHHHHHHHhh
Confidence 25899994 5899999998876
No 218
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=6.7e-23 Score=189.92 Aligned_cols=241 Identities=17% Similarity=0.147 Sum_probs=176.1
Q ss_pred HHHHHHHHHHhcC------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcCCCC
Q 038416 28 TVAEDAVVDALRT------AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 28 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~g~ 98 (387)
..++++|++.... ...+.|+. .+...|++.+|++++ .+..++ ++|+++|+..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 4577777775422 12234554 356889999999883 344555 88999999999999999999
Q ss_pred eEEEcC-CCCcchHH----------HhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeC----CCCCccc
Q 038416 99 NILIPR-PGYPLYEI----------HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIIN----PGNPCGN 163 (387)
Q Consensus 99 ~vl~~~-p~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~----p~nptG~ 163 (387)
+|+++. |.|..+.. .++ ..|.++..+++++ ++.+|++++++++++++++|++++ |+||||.
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~--~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~ 178 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLK--DFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFT 178 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTG--GGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCC
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHH--HcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCc
Confidence 999998 99998774 345 6788888888753 457899999999999999999999 9999998
Q ss_pred cCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCc
Q 038416 164 VFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGI 240 (387)
Q Consensus 164 ~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~ 240 (387)
+ .++++|+++|++ +|+++|+|++|+.+.+... +. ... ..++++|++|.++.+| ...||+++++
T Consensus 179 v---~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~---p~-~~g---~Div~~S~sK~lgg~~~~~GG~v~~~~---- 244 (409)
T 3jzl_A 179 I---EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE---PP-EVG---ADIIAGSLIKNPGGGLAKTGGYIAGKE---- 244 (409)
T ss_dssp H---HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC---SG-GGT---CSEEEEETTSGGGTTTCSSCEEEEECH----
T ss_pred c---ccHHHHHHHHHhhCCCCEEEEeCCcccccccCC---cc-ccC---CeEEEECccccCCccCCceEEEEEeCH----
Confidence 7 679999999999 9999999999987653322 11 122 2388999999987766 4469998865
Q ss_pred ccchhHHHHHHhhhhc-----cCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 241 LQNSGFVDSIKGCLNA-----ASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 241 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+++++++..... ..++......++...+. .+..+.++..+++..+.+.|+++ ++.
T Consensus 245 ----~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~ 304 (409)
T 3jzl_A 245 ----ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEF-GVE 304 (409)
T ss_dssp ----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred ----HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 788888764321 11222211233322232 25667788888999999999988 455
No 219
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.91 E-value=5.9e-23 Score=187.43 Aligned_cols=327 Identities=13% Similarity=0.038 Sum_probs=223.1
Q ss_pred CCCCcHHHHHHHHHHhcCCCCC--------CCCC--CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-cCChHHHHHHHH
Q 038416 23 LLSDSTVAEDAVVDALRTAHYN--------CYSP--TLGVPSARRGIADYLNRDLPYKLSP-EDVYL-TLGCSQAIEISL 90 (387)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~--------~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~a~~~~~ 90 (387)
-.+.|+.|+++|.+.+.+...+ +.+. .....+.|+.++++++ +++ ++|++ |+|+|+++++++
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHH
Confidence 3689999999999988642111 1111 1134566777888873 333 56887 589999999999
Q ss_pred HhhcCC--CCeEEEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCC
Q 038416 91 SVLARP--GANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFS 166 (387)
Q Consensus 91 ~~l~~~--g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 166 (387)
..+..+ ||+|++...++++ +...++ ..|..+..++.+ .++..+++.++.++++++++|.+++..|.||+..|
T Consensus 95 ~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~--~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~p 170 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVTGAWSAKAAEEAK--KFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFD 170 (377)
T ss_dssp HHHGGGSTTCEEEECCCSHHHHHHHHHHT--TTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECS
T ss_pred HhccCCCCCCeEEEEECCHHHHHHHHHHH--HhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEch
Confidence 999865 8999877776654 345566 778777776653 34456777777788889999999999999999988
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCccc---c
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQ---N 243 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~---~ 243 (387)
. +|+++|+++++|.+++. +..+..+..++ +++.|.+|++|++| +|+++.++...-.- .
T Consensus 171 i--------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~ 231 (377)
T 3e77_A 171 F--------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALREC 231 (377)
T ss_dssp S--------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTS
T ss_pred h--------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCC
Confidence 4 36788999999999985 22333343332 46789999998888 68888875331110 1
Q ss_pred hhHHHH--HHhhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--CceEEEE
Q 038416 244 SGFVDS--IKGCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCITCPV-KP--QGAMFVM 317 (387)
Q Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~--~~g~~~~ 317 (387)
|.+.+. ..+......+++.....++.++++...+. .++.+.++.+++++++++.|+++|++.... .+ ..+..+.
T Consensus 232 p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs 311 (377)
T 3e77_A 232 PSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIP 311 (377)
T ss_dssp CGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEE
T ss_pred CchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEE
Confidence 222211 11111234678888888888888765555 789999999999999999999998776221 12 1233344
Q ss_pred EecCcccccCCCc-HHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 318 VKLNVSMLEDIGD-DLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 318 ~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
+.++.... + .+ +..++..+ .++||.+.+|.. ..+.+|+|+. .++++++.+++.|++++++.
T Consensus 312 f~~~~~~~-~-~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 312 FRIGNAKG-D-DALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp EEESSTTC-C-HHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCC-c-hhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 45542100 0 01 13455555 467999888753 2467999994 58999999999999998764
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=9.2e-23 Score=189.57 Aligned_cols=240 Identities=16% Similarity=0.132 Sum_probs=174.5
Q ss_pred HHHHHHHHHHhcC------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcCCCC
Q 038416 28 TVAEDAVVDALRT------AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 28 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~g~ 98 (387)
+.|++++.+.... ...+.|+.. +..+|++.++++++ .+..++ ++|+++|+..++.+++++||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 5677777775432 122345543 57889999999883 344555 78899999999999999999
Q ss_pred eEEEcC-CCCcchHH-----------HhhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeC----CCCC
Q 038416 99 NILIPR-PGYPLYEI-----------HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIIN----PGNP 160 (387)
Q Consensus 99 ~vl~~~-p~~~~~~~-----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~----p~np 160 (387)
+|++.. |.|..+.. .++ ..|.++..+++ +++.+|+++++++++ +++++|++++ |+||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~--~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~np 192 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLR--EYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRK 192 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTG--GGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHH--HcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCc
Confidence 999998 99987763 344 57888888876 345789999999998 7899999999 9999
Q ss_pred ccccCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCC
Q 038416 161 CGNVFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDP 237 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~ 237 (387)
||.+ .++++|+++|++ +|+++|+|++|+.+.+... +. ... ..++++|+||.++.+| .+.||+++++
T Consensus 193 tg~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~g---aDiv~~S~sK~lgg~g~~~GG~i~~~~- 261 (427)
T 3hvy_A 193 SLRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVG---ADIIAGSLIKNIGGGIATTGGYIAGKE- 261 (427)
T ss_dssp CCCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGT---CSEEEEETTSGGGTTTCCSCEEEEECH-
T ss_pred cccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccC---CeEEEECCcccccccccceEEEEEECH-
Confidence 9877 679999999999 8999999999987653322 11 122 2388999999987655 5568888865
Q ss_pred CCcccchhHHHHHHhhhh---ccC--CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 238 NGILQNSGFVDSIKGCLN---AAS--HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
+++++++.... ... +++......+...+ ..+..+.++..+++..+.+.|+++ ++.
T Consensus 262 -------~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~ 321 (427)
T 3hvy_A 262 -------EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-----FMAPHVTIEAVKGAVFCARIMELA-GFD 321 (427)
T ss_dssp -------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred -------HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-----hHHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 78888877432 111 11111122222222 234567788888999999999988 444
No 221
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.91 E-value=1.4e-23 Score=199.35 Aligned_cols=338 Identities=11% Similarity=0.032 Sum_probs=213.1
Q ss_pred cccCCCCCCCCCCCCCC-CcHHHHHHHHHHhcCC---CCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHH
Q 038416 9 TRHSPWPRRPLGVSLLS-DSTVAEDAVVDALRTA---HYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQ 84 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 84 (387)
.++|.+-|..... ++ .+|.+.+|+.+++... +...|+. ....++++.+++.+.+..+ ...++|++++|+++
T Consensus 64 ~ylD~~~g~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGse 138 (472)
T 1ohv_A 64 RMLDLYSQISSIP--IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGSC 138 (472)
T ss_dssp EEEESSHHHHTCS--SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHHH
T ss_pred EEEECCCCHhhcc--cCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCchh
Confidence 4555544433221 23 5899999999876421 1122332 2356899999997766543 35679999999999
Q ss_pred HHHHHHHhhc--------C-----------------CC---CeEEEcCCCCcchHHHhhccCCCcee-----------ee
Q 038416 85 AIEISLSVLA--------R-----------------PG---ANILIPRPGYPLYEIHAAGSNNNLEA-----------RH 125 (387)
Q Consensus 85 a~~~~~~~l~--------~-----------------~g---~~vl~~~p~~~~~~~~~~~~~~g~~~-----------~~ 125 (387)
|++.+++.+. . +| +.|++.+++|+++...+. +..|... ..
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~-~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCL-ATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHH-HHCCSCHHHHTTSCCCCCCE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHH-hcCCCccccccCCCCCCCcc
Confidence 9999998873 1 35 899999999998654442 0222211 11
Q ss_pred eccCCC-CC------c-----cCChhhHHHhhcc------CceEEEEeCCCCCccc-cCCHHHHHHHHHHHHhcCcEEee
Q 038416 126 YDLLPE-KR------W-----EVDLDGVEALADE------NTVAIVIINPGNPCGN-VFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 126 ~~~~~~-~~------~-----~~~~~~l~~~~~~------~~~~v~l~~p~nptG~-~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
++++.. .. + ..|+++|++++++ ++++|++...+|++|. .++++.+++|.++|++||+++|+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 121100 00 0 1257888888875 6677766666788997 46789999999999999999999
Q ss_pred cccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhh-hccCCcchHHH
Q 038416 187 DEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCL-NAASHPVTFIQ 265 (387)
Q Consensus 187 D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (387)
||+|.++.+.|.. ..+..++.. ..+.+.||||.+ ++| |+++ ++ ++. .+.... ..+++.+++++
T Consensus 298 DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~~ 361 (472)
T 1ohv_A 298 DEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSKN 361 (472)
T ss_dssp ECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHHH
T ss_pred eCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHHH
Confidence 9999987655431 122222210 002244899985 444 7766 32 221 111121 23456788888
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC----CC-CCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHH
Q 038416 266 AAVPRIVDETNEAFFAKIIGLLKETADICYERIKEI----PC-ITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAK 340 (387)
Q Consensus 266 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (387)
.++.++|+...+ ....++++++++++++.|+++ |+ +..+ .+ .|.++++.++.. .....+...++
T Consensus 362 aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~-~g~~~~~~~~~~-----~~~~~~~~~l~- 430 (472)
T 1ohv_A 362 LLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RG-RGTFCSFDTPDE-----SIRNKLISIAR- 430 (472)
T ss_dssp HHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EE-ETTEEEEECSSH-----HHHHHHHHHHH-
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cC-CceEEEEEeCCh-----hHHHHHHHHHH-
Confidence 888877764322 234566666667777666653 32 2211 23 355666666421 12456777765
Q ss_pred hcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 341 EESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 341 ~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
++||.+.|+. .+++|++++ .+++++++++++|+++++++
T Consensus 431 ~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 431 NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5699998853 579999774 68999999999999988754
No 222
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.85 E-value=1.9e-26 Score=216.43 Aligned_cols=318 Identities=14% Similarity=0.075 Sum_probs=209.9
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.+.+++++++.......|+. ....+|.+.+++++ + ..+.+++++|+++|+..+++.+. ..+++|++.
T Consensus 117 ~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~ 188 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGTEANLMALATATAITGRKTVLAF 188 (465)
Confidence 57899999999887643333433 34466777777665 2 45789999999999999998763 345899999
Q ss_pred CCCCcchHHHhhc--cCCCc--eeeeeccCCCCCccCChhhHHHhhc---cCceEEEEeCCCCCcccc-CCHHHHHHHHH
Q 038416 104 RPGYPLYEIHAAG--SNNNL--EARHYDLLPEKRWEVDLDGVEALAD---ENTVAIVIINPGNPCGNV-FSYQHLQKIAR 175 (387)
Q Consensus 104 ~p~~~~~~~~~~~--~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~-~~~~~~~~l~~ 175 (387)
+++|+++...+.- ...|. .+..++. -|+++|+++++ +++++|++...++++|.. .+++++++|.+
T Consensus 189 ~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~ 261 (465)
T 2yky_A 189 DGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRA 261 (465)
Confidence 9999876543220 01233 2222221 26888888887 466666655446679965 46788999999
Q ss_pred HHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHh---
Q 038416 176 TARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKG--- 252 (387)
Q Consensus 176 ~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~--- 252 (387)
+|++||+++|+||+|+ +.. +. ...+..+ +....+.|++|.++. |+|+||+++++ ++++.+..
T Consensus 262 l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~---gv~pDi~t~sK~lg~-G~piG~v~~~~--------~i~~~l~~~~~ 326 (465)
T 2yky_A 262 EASRCGALLIFDEVMT-SRL-SG-GGAQEML---GISADLTTLGKYIGG-GMSFGAFGGRR--------DLMERFDPARD 326 (465)
Confidence 9999999999999999 632 22 1111111 112335689999875 89999999876 67776655
Q ss_pred ---hhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEEecCccccc
Q 038416 253 ---CLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIP---CITCPVKPQGAMFVMVKLNVSMLE 326 (387)
Q Consensus 253 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~ 326 (387)
....+++.++++++++.+.|+...++ ...+++.++.+++++.|+++. ++. ...+..|.++++.+......
T Consensus 327 g~~~~~~T~~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~g~G~~~~i~~~~~~~~ 402 (465)
T 2yky_A 327 GAFAHAGTFNNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAP-LQFTGLGSLGTIHFSRAPIR 402 (465)
Confidence 12245678888898888877753332 344555555556666555431 222 22455677888877531110
Q ss_pred C--------CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhh
Q 038416 327 D--------IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 327 ~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~ 384 (387)
. ......+...++ ++||.+.|+. +. . +++..+++++++++++|.+++++++
T Consensus 403 ~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~---~--~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 403 SAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MY---A--LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 0 001235666664 5799999875 22 1 6677899999999999999988764
No 223
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=1.4e-22 Score=188.41 Aligned_cols=255 Identities=16% Similarity=0.129 Sum_probs=180.8
Q ss_pred HHHHHHHHHHhcC------CCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcCCCC
Q 038416 28 TVAEDAVVDALRT------AHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLARPGA 98 (387)
Q Consensus 28 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~g~ 98 (387)
+.|++++.+.... ...+.|+. .+..+|++.+|++++ .+..++ ++|+++|+..++.+++++||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence 4577777764321 11223444 356889999999883 233455 78899999999999999999
Q ss_pred eEEEcC-CCCcchHHH-----------hhccCCCceeeeeccCCCCCccCChhhHHHhhc--cCceEEEEeC----CCCC
Q 038416 99 NILIPR-PGYPLYEIH-----------AAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD--ENTVAIVIIN----PGNP 160 (387)
Q Consensus 99 ~vl~~~-p~~~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~----p~np 160 (387)
+|+++. |.|..+... +. ..|.++..++++. ++.+|+++++++++ +++++|++++ |+||
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~--~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~np 192 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLK--EFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRR 192 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTG--GGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHH--HcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCC
Confidence 999998 999887633 34 5688888888743 34689999999998 7899999999 9999
Q ss_pred ccccCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCC
Q 038416 161 CGNVFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDP 237 (387)
Q Consensus 161 tG~~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~ 237 (387)
+|.+ .++++|+++|++ +|+++|+|++|+.+.+... +. ... ..++++|+||.++.+| .+.||+++++
T Consensus 193 tg~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~---p~-~~g---aDiv~~S~sK~lgg~g~~~gG~i~~~~- 261 (427)
T 3i16_A 193 ALLI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKE---PT-DVG---ADLIAGSLIKNIGGGIAPTGGYLAGTK- 261 (427)
T ss_dssp CCCH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSC---GG-GGT---CSEEEEETTSGGGTTTCCSCEEEEECH-
T ss_pred cccH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCC---cc-ccC---CeEEEecCcccCCCCCCceEEEEEECH-
Confidence 9877 779999999999 9999999999997653322 11 122 2388999999987766 6679999875
Q ss_pred CCcccchhHHHHHHhhhh---ccCCcch-HH-HHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 038416 238 NGILQNSGFVDSIKGCLN---AASHPVT-FI-QAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQG 312 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~---~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (387)
+++++++.... ......+ +. ...+...+ ..+..+.++..+++..+.+.|+++ ++. + .|..
T Consensus 262 -------~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~ 326 (427)
T 3i16_A 262 -------DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKY 326 (427)
T ss_dssp -------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCT
T ss_pred -------HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCC
Confidence 78888877432 1111111 21 22222222 335678888899999999999988 444 3 3333
Q ss_pred eE-----EEEEecC
Q 038416 313 AM-----FVMVKLN 321 (387)
Q Consensus 313 g~-----~~~~~~~ 321 (387)
.. .+.+.+.
T Consensus 327 ~~~~~~~i~~i~l~ 340 (427)
T 3i16_A 327 DEKRSDIIQSIKFN 340 (427)
T ss_dssp TSCCSSSCEEEECS
T ss_pred CCCCccEEEEEEEC
Confidence 32 5555564
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=3.3e-22 Score=196.88 Aligned_cols=311 Identities=13% Similarity=0.058 Sum_probs=203.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHH-hhccCCCceeeeecc
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIH-AAGSNNNLEARHYDL 128 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~-~~~~~~g~~~~~~~~ 128 (387)
....++++.+|++++ .+ ..+++++|+++++.+++.+++++||+|+++.++|.++... +. ..|++++.++.
T Consensus 173 ~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~--l~Ga~~v~v~~ 243 (730)
T 1c4k_A 173 GPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALA--MAGGRPVYLQT 243 (730)
T ss_dssp THHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTT--TTCCEEEEECE
T ss_pred HHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHH--HCCCEEEEEeC
Confidence 346788999999883 23 3577888889999999999999999999999999988877 78 88999888876
Q ss_pred CCCCCc----cCChhhH-----HHhhccC------c----eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 129 LPEKRW----EVDLDGV-----EALADEN------T----VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 129 ~~~~~~----~~~~~~l-----~~~~~~~------~----~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
... ++ .+|+++| +++++++ + +++++++| |++|.+.+ +++|+++|+++|+++|+|++
T Consensus 244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECT
T ss_pred Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcc
Confidence 432 22 3688888 8888765 5 88999998 58999977 88999999999999999999
Q ss_pred cccc-ccCCCC--Ccccc--ccCC-CccEEEEecCcccccccccce-EEEEeeCCCCcccchhH--HHHHHhhh--hccC
Q 038416 190 YNHL-AFGSTP--YVPMG--VFGS-IVPVITLGSISKRWIVPGWRL-GWLVTSDPNGILQNSGF--VDSIKGCL--NAAS 258 (387)
Q Consensus 190 ~~~~-~~~~~~--~~~~~--~~~~-~~~~~~i~s~sK~~~~~g~r~-G~i~~~~~~~~~~~~~~--~~~~~~~~--~~~~ 258 (387)
|+.. .+.+.. ..++. .+.. +.+++++.|+||+ ++|.+. |+++.++.. +.+.+.. ...+.... ..+.
T Consensus 319 h~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~~~-l~g~~~~i~~~~~~~~~~~~~st 395 (730)
T 1c4k_A 319 WVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKDSH-IKGQLRYCDHKHFNNSFNLFMST 395 (730)
T ss_dssp TCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEECGG-GTTSTTCCCHHHHHHHHHHHSCS
T ss_pred cccccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecchh-hcCcccccCHHHHHHHHHHhCCC
Confidence 9743 333211 11221 1122 2457999999998 455554 566555421 1000001 12222221 1234
Q ss_pred CcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC--------------------------
Q 038416 259 HPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKE-IPCITCPVKPQ-------------------------- 311 (387)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~-------------------------- 311 (387)
+++....+++..++.....+...++.+++.++++.+++.|++ ++++.++ .|.
T Consensus 396 sp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (730)
T 1c4k_A 396 SPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFEK 474 (730)
T ss_dssp SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCCT
T ss_pred CCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccCc
Confidence 556655555555554322323355567777888888888887 6677643 221
Q ss_pred -----------ce-EE-----EEEecCcc-------cccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CC
Q 038416 312 -----------GA-MF-----VMVKLNVS-------MLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AE 365 (387)
Q Consensus 312 -----------~g-~~-----~~~~~~~~-------~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~ 365 (387)
.+ ++ +.+.++.. ...+ .+..++...| +++||.+.... ...+|++++ .+
T Consensus 475 ~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g-~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t 548 (730)
T 1c4k_A 475 GAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFG-VPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET 548 (730)
T ss_dssp TCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSC-CCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred cchhccccccCCcccccCCeEEEEEeCCcccccccccccC-CCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence 11 11 33333210 0001 1455666655 55699876532 467898884 58
Q ss_pred hHhHHHHHHHHHHHHHHhh
Q 038416 366 PATLEDGLERIKAFCQRHA 384 (387)
Q Consensus 366 ~e~~~~~~~~l~~~~~~~~ 384 (387)
+++++.+++.|.++.+.+.
T Consensus 549 ~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 549 PAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8999999999998877653
No 225
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.90 E-value=8.7e-23 Score=187.42 Aligned_cols=323 Identities=14% Similarity=0.028 Sum_probs=213.4
Q ss_pred CCCcHHHHHHHHHHhcCCC--------CCCCCC--CCCcHHHHHHHHHHHhhcCCCCCCC-CCEEE-cCChHHHHHHHHH
Q 038416 24 LSDSTVAEDAVVDALRTAH--------YNCYSP--TLGVPSARRGIADYLNRDLPYKLSP-EDVYL-TLGCSQAIEISLS 91 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~--------~~~y~~--~~~~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~a~~~~~~ 91 (387)
-+.|+.|+++|.+.+.+.. ..+.+. .....+.|+.++++++ ++. ++|++ |+|+|+++++++.
T Consensus 36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVPL 109 (386)
T ss_dssp CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHH
Confidence 3689999999987764311 111121 3467899999999993 433 46887 6999999999999
Q ss_pred hhcCCCCeEEEcCCCCcc--hHHHhhccCCCceeeeeccC-CCCCccCChhhHHHhhccCceEEEEeCCCCCcccc-CCH
Q 038416 92 VLARPGANILIPRPGYPL--YEIHAAGSNNNLEARHYDLL-PEKRWEVDLDGVEALADENTVAIVIINPGNPCGNV-FSY 167 (387)
Q Consensus 92 ~l~~~g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~-~~~ 167 (387)
.++++||+|++...++++ +...++ ..| ++..++.+ ..++..+++++++.++++++++|.+++..|.||+. .|
T Consensus 110 ~l~~~gd~v~~~~~~~~~~~~~~~a~--~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p- 185 (386)
T 3qm2_A 110 NLLGDKTTADYVDAGYWAASAIKEAK--KYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE- 185 (386)
T ss_dssp HHCTTCCEEEEEESSHHHHHHHHHHT--TTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC-
T ss_pred hccCCCCeEEEEeCCHHHHHHHHHHH--HhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc-
Confidence 999999998765554443 445566 778 88888775 12333367888888889999999999988899996 66
Q ss_pred HHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc---cch
Q 038416 168 QHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL---QNS 244 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~---~~~ 244 (387)
+++|. +|+++++|.+++. +..+..+..++ +.+.|.+|++|++| +|++++++...-. ..|
T Consensus 186 --i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p 247 (386)
T 3qm2_A 186 --TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCP 247 (386)
T ss_dssp --CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSC
T ss_pred --hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECHHHHhhhcccCC
Confidence 44443 6999999999985 33333444442 45689999998777 7888887632100 012
Q ss_pred hHHHH--HHhhhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCCCCC--CceEEEEE
Q 038416 245 GFVDS--IKGCLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIKEIPCI-TCPVKP--QGAMFVMV 318 (387)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~--~~g~~~~~ 318 (387)
.+.+. .........+++.+...++.++++...+. .++.+.++.+++++++++.|+++ ++ .....+ .....+.+
T Consensus 248 ~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f 326 (386)
T 3qm2_A 248 SILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPF 326 (386)
T ss_dssp GGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEE
T ss_pred cHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEE
Confidence 22111 11111234577778888888888765555 68999999999999999999987 44 211122 12234455
Q ss_pred ecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 319 KLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++... -+.+++.. +.++||.+.+|... .+.+|+|+. .+++|++++++.|+++.++.
T Consensus 327 ~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 327 QLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp EESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 555211 12455555 46779998887543 245999995 48999999999999988763
No 226
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=3.3e-22 Score=181.88 Aligned_cols=322 Identities=14% Similarity=0.054 Sum_probs=215.9
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCC--------CCCC--CCCcHHHHHHHHHHHhhcCCCCCC-CCCEE
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYN--------CYSP--TLGVPSARRGIADYLNRDLPYKLS-PEDVY 77 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--------~y~~--~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~ 77 (387)
.++++.+|.. +.|+.|+++|.+.+.+...+ +.+. .....+.|+.++++++ ++ +++|+
T Consensus 5 ~~~~f~pgpt------~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~v~ 72 (361)
T 3m5u_A 5 RKINFSAGPS------TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYEVL 72 (361)
T ss_dssp CCEECCSSSC------CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEEEE
T ss_pred ceEeecCCCC------CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEE
Confidence 3445567633 89999999999987631111 1111 1235567778888873 43 45788
Q ss_pred E-cCChHHHHHHHHHhhcCCCCeEEEcCCCCc--chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEE
Q 038416 78 L-TLGCSQAIEISLSVLARPGANILIPRPGYP--LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVI 154 (387)
Q Consensus 78 ~-~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 154 (387)
+ |+|+|+++++++..+. +||++++...+++ .+...++ ..|.++..++.+....+.++++. + +++++++|.+
T Consensus 73 f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~--~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~ 146 (361)
T 3m5u_A 73 FLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQ--ILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYI 146 (361)
T ss_dssp EESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHH--HTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEE
T ss_pred EEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHH--HcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEE
Confidence 7 9999999999999998 7886532222222 2445556 68999999987643322245666 4 8889999999
Q ss_pred eCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 155 INPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 155 ~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
++..|.||+..+. +++ +|+++++|.+++. +..+..+..+ .+++.|.+|++|++| +|+++.
T Consensus 147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~ 206 (361)
T 3m5u_A 147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFI 206 (361)
T ss_dssp ESEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEE
T ss_pred eCCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEE
Confidence 9988999998762 233 4999999999985 2222333322 377889999998777 788888
Q ss_pred eCCCCcccchhHHHHHHh--------------hhhccCCcchHHHHHHHHHhhhccHH-HHHHHHHHHHHHHHHHHHHhh
Q 038416 235 SDPNGILQNSGFVDSIKG--------------CLNAASHPVTFIQAAVPRIVDETNEA-FFAKIIGLLKETADICYERIK 299 (387)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 299 (387)
++ +..+.+.. ......+++.....++.++++...+. .++.+.++.+++++++++.|+
T Consensus 207 ~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~ 278 (361)
T 3m5u_A 207 RK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID 278 (361)
T ss_dssp EH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 75 33333321 11234577888888888887754444 588899999999999999999
Q ss_pred cCCCC-CCCCCCC--ceEEEEEecCcccccCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHH
Q 038416 300 EIPCI-TCPVKPQ--GAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLE 374 (387)
Q Consensus 300 ~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~ 374 (387)
+++++ .....+. ....+.+.++.. ++ -+.++... +.++||.+.+|... .+.+|+|+. .+++|++.+++
T Consensus 279 ~~~g~~~~~~~~~~rs~~ivsf~~~~~--~~--~~~~~~~~-L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~ 351 (361)
T 3m5u_A 279 LSNGFYKGHADKKDRSLMNVSFNIAKN--KD--LEPLFVKE-AEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCE 351 (361)
T ss_dssp TSTTSEEESSCGGGBCSSEEEEEESSC--TT--HHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHH
T ss_pred HCCCeeeccCCHHHcCCeEEEEECCCc--hh--hhHHHHHH-HHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHH
Confidence 99766 3221222 122344445420 00 12355544 47779998887542 256999995 48999999999
Q ss_pred HHHHHHHHh
Q 038416 375 RIKAFCQRH 383 (387)
Q Consensus 375 ~l~~~~~~~ 383 (387)
.|+++.++.
T Consensus 352 al~~~~~~~ 360 (361)
T 3m5u_A 352 FMKEFQGKY 360 (361)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988764
No 227
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=6.1e-22 Score=185.03 Aligned_cols=226 Identities=16% Similarity=0.157 Sum_probs=159.3
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC-CCCcchHHHhh--------ccCCCceeeee
Q 038416 56 RRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPR-PGYPLYEIHAA--------GSNNNLEARHY 126 (387)
Q Consensus 56 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~-p~~~~~~~~~~--------~~~~g~~~~~~ 126 (387)
++.+.+++.+.++......+++++ |+++|+..++.+++++||+|+++. |.|..+...+. ....|.+++.+
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v 145 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV 145 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence 444444444433322222223345 678999999999999999999998 99998876553 00468888888
Q ss_pred ccCCCCCccCChhhHHHhhccCceEEEEe-CCCCCccccCCHHHHHHHHHHHHh--cCcEEeecccccccccCCCCCccc
Q 038416 127 DLLPEKRWEVDLDGVEALADENTVAIVII-NPGNPCGNVFSYQHLQKIARTARN--LGIIVIADEVYNHLAFGSTPYVPM 203 (387)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~-~p~nptG~~~~~~~~~~l~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~ 203 (387)
+++. ++.+|++++++++++++++|+++ +|+||+|...+.+++++|+++|++ +|+++|+|++|+.+.+...+ .
T Consensus 146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~---~ 220 (431)
T 3ht4_A 146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---C 220 (431)
T ss_dssp CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---G
T ss_pred CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc---c
Confidence 8753 46789999999999999999999 489999999999999999999999 99999999999987654321 1
Q ss_pred cccCCCccEEEEecCcccccc-cccceEEEEeeCCCCcccchhHHHHHHhhhhc---c--CCcchHHHHHHHHHhhhccH
Q 038416 204 GVFGSIVPVITLGSISKRWIV-PGWRLGWLVTSDPNGILQNSGFVDSIKGCLNA---A--SHPVTFIQAAVPRIVDETNE 277 (387)
Q Consensus 204 ~~~~~~~~~~~i~s~sK~~~~-~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~l~~~~~ 277 (387)
.+.. .++++|++|.++. .+...||+++++ ++++.++..... . .+++.....++...+.
T Consensus 221 -~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~---- 284 (431)
T 3ht4_A 221 -HVGA---DLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF---- 284 (431)
T ss_dssp -GTTC---SEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH----
T ss_pred -ccCC---eEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhh----
Confidence 1222 3889999999654 224449999875 788888764321 1 1121111222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 038416 278 AFFAKIIGLLKETADICYERIKEIPCIT 305 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (387)
.+..+.++..++++.+.+.|+++ ++.
T Consensus 285 -~~~~~~~~~~~~a~~l~~~L~~~-g~~ 310 (431)
T 3ht4_A 285 -LAPHVAGQALKGAIFTAAFLEKL-GMN 310 (431)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhC-cCE
Confidence 24566777888888898999887 444
No 228
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=4e-21 Score=190.91 Aligned_cols=306 Identities=10% Similarity=0.002 Sum_probs=196.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCC
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPE 131 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 131 (387)
..++++.++++++ .+ +.+++++|+++++.+++.+++++||+|+++.|+|.++...+. ..|++++.++....
T Consensus 207 v~~~ee~la~l~G------~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~--~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 207 FGESEKYAARVFG------AD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLM--LTGAKPVYMVPSRN 277 (755)
T ss_dssp HHHHHHHHHHHHT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH--HHCCEEEEECCCBC
T ss_pred HHHHHHHHHHHhC------CC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH--HcCCEEEEEeCCCC
Confidence 4677778888773 22 457888888999999999999999999999999999888888 88999998887532
Q ss_pred CCcc----C-----ChhhHHHhhcc--Cce--------EEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 132 KRWE----V-----DLDGVEALADE--NTV--------AIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 132 ~~~~----~-----~~~~l~~~~~~--~~~--------~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
+++ + |+++|++++++ +++ ++++++| ||+|.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 278 -~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~ 352 (755)
T 2vyc_A 278 -RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_dssp -TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCT
T ss_pred -ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCch
Confidence 223 4 89999998864 344 8899998 69999977 88999999999999999999985
Q ss_pred cc-cCCC--CCccccc--cC-CCccEEEEecCcccccccccc-eEEEEeeCCCCcccchhHHHHHHhhh--hccCCcchH
Q 038416 193 LA-FGST--PYVPMGV--FG-SIVPVITLGSISKRWIVPGWR-LGWLVTSDPNGILQNSGFVDSIKGCL--NAASHPVTF 263 (387)
Q Consensus 193 ~~-~~~~--~~~~~~~--~~-~~~~~~~i~s~sK~~~~~g~r-~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 263 (387)
.. +... +..++.. .+ ...+++++.|+||+ ++|.+ .|++++++..... + ...+.... ..+.+++.+
T Consensus 353 ~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~~~~i---~-~~~~~~~~~~~~s~sp~~~ 426 (755)
T 2vyc_A 353 YARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAI---N-FSRFNQAYMMHATTSPLYA 426 (755)
T ss_dssp TGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECCBTCC---C-HHHHHHHHHHTSCSSCCHH
T ss_pred hcccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCccccc---C-HHHHHHHHHHhCCCCHHHH
Confidence 32 3221 1222211 12 23467899999998 45655 5777776531011 0 12222221 123556666
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCC---------CCCCCCCC-----------------------
Q 038416 264 IQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPC---------ITCPVKPQ----------------------- 311 (387)
Q Consensus 264 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~----------------------- 311 (387)
...++..+++........++.++..++.+.+++.|+++++ +.++ .|.
T Consensus 427 ~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (755)
T 2vyc_A 427 ICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTT 505 (755)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccc
Confidence 6666555554322221244555555666666666655444 3222 111
Q ss_pred --------------------ceE------EEEEecCcccccC-----CCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEE
Q 038416 312 --------------------GAM------FVMVKLNVSMLED-----IGDDLEFCLKLAKEESVIILPGRTVGMKNWLRI 360 (387)
Q Consensus 312 --------------------~g~------~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri 360 (387)
.+. -+.+.++.....| ..+...+...| +++||.+... ....+|+
T Consensus 506 ~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~ 580 (755)
T 2vyc_A 506 VQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMF 580 (755)
T ss_dssp CGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEE
T ss_pred hhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEE
Confidence 111 1233333211111 11334555554 6689876432 2578999
Q ss_pred Eee--CChHhHHHHHHHHHHHHHHh
Q 038416 361 AFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 361 ~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.++ .++++++.+++.|.+..+.+
T Consensus 581 ~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 581 LFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp ECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHHHhh
Confidence 994 58899999999998887654
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.84 E-value=1.1e-18 Score=162.58 Aligned_cols=319 Identities=13% Similarity=0.076 Sum_probs=195.3
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEEEc
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANILIP 103 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl~~ 103 (387)
.+|.|.+|+++++....... .+.....+|.+.+++.+ + ..+.+++++++++|++.+++... ...++|+..
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~-~~~~~~~~lae~l~~~~------p-~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~ 175 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLT-GHNLLEGRLARLICERF------P-QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVF 175 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCC-SEESSHHHHHHHHHHHS------T-TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCcc-CCcHHHHHHHHHHHHhC------C-CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEE
Confidence 67899999999988642211 22234456666666665 2 45799999999999999998864 234789999
Q ss_pred CCCCcchHHHhhccCCC-----ceeeeeccCCCCCccCChhhHHHhhccC--ceEEEEeCC-CCCcccc-CCHHHHHHHH
Q 038416 104 RPGYPLYEIHAAGSNNN-----LEARHYDLLPEKRWEVDLDGVEALADEN--TVAIVIINP-GNPCGNV-FSYQHLQKIA 174 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~l~~p-~nptG~~-~~~~~~~~l~ 174 (387)
..+|++...... +..+ .....+| . -|++.+++.++.+ ..+.++..| ++..|.+ ++++.+++|.
T Consensus 176 ~~~yHG~t~~~~-~~~~~~~~~~~~~~~p---~----nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr 247 (454)
T 4ao9_A 176 SGGYHGGVLGFG-ARPSPTTVPFDFLVLP---Y----NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALR 247 (454)
T ss_dssp TTCBCSTTCBBS-SSBCTTSCCSEEEEEC---T----TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHH
T ss_pred eCCcCCcccccc-ccccCccCCCCcccCC---C----chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHH
Confidence 999987543222 0111 1122222 1 2678888877542 234455566 5566765 5678899999
Q ss_pred HHHHhcCcEEeecccccccccCCCCCc-cccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh
Q 038416 175 RTARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC 253 (387)
Q Consensus 175 ~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~ 253 (387)
++|++||+++|+||++.+ ..|.... ......+| +.+++|.+ ..|+++|.+++++ ++.+.+...
T Consensus 248 ~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~PD-----i~t~gK~l-ggG~Piga~~~~~--------ei~~~~~~~ 311 (454)
T 4ao9_A 248 ESATQVGALLVFDEVMTS--RLAPHGLANKLGIRSD-----LTTLGKYI-GGGMSFGAFGGRA--------DVMALFDPR 311 (454)
T ss_dssp HHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCCCS-----EEEEEGGG-GTTSSCEEEEECH--------HHHGGGCTT
T ss_pred HHHhhcCCEEEEECCCcC--CCccccchhccCCCCc-----EEEecccc-CCCCcceeeeeHH--------HHHHHHhhc
Confidence 999999999999999984 2232221 11122232 33677995 4678999999876 676666432
Q ss_pred -----hhccCCcchHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccccC
Q 038416 254 -----LNAASHPVTFIQAAVPRIVDETN-EAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVMVKLNVSMLED 327 (387)
Q Consensus 254 -----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (387)
...+++.++++.+++.+.|+... ++.+++..+.-...++.+.+.+++.+-+. . ...-|.++.+.|.......
T Consensus 312 ~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~-~-vrg~G~m~gi~f~~~~~~~ 389 (454)
T 4ao9_A 312 TGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAM-Q-FTGIGSLMNAHFVQGDVRS 389 (454)
T ss_dssp TCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSC-E-EEEETTEEEEESCCSCCCS
T ss_pred cCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCE-E-EeeeceEEEEEEecCCCCC
Confidence 12356778888888888877543 23333333333333444444434443211 1 1223445555553211111
Q ss_pred C-----CcH---HHHHHHHHHhcCeEEEcCCccCCCCeEEEEeeCChHhHHHHHHHHHHHHHHhhh
Q 038416 328 I-----GDD---LEFCLKLAKEESVIILPGRTVGMKNWLRIAFAAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 328 ~-----~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
. .+. ..+...+ .++||.+.|. +.+.+++.+++++|++++++|++++.++..
T Consensus 390 ~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 390 SEDLAAVDGRLRQLLFFHL-LNEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp GGGGTTCCHHHHHHHHHHH-HHTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHhhhHHHHHHHHHHH-HHCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHHHHhccc
Confidence 0 011 2334444 4569998774 345556667999999999999999988754
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.83 E-value=1.3e-18 Score=170.01 Aligned_cols=228 Identities=16% Similarity=0.079 Sum_probs=152.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccC
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLL 129 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~ 129 (387)
.-..++++.+|++++ . ...+++++|+++|+..++.+++++||.|+++.++|.++...+. ..|+++++++..
T Consensus 195 g~i~eaE~~lA~~fG------a-~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~--lsGa~pv~v~~~ 265 (715)
T 3n75_A 195 GPHKEAEQYIARVFN------A-DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMM--MSDVTPIYFRPT 265 (715)
T ss_dssp THHHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH--HSCCEEEEECCC
T ss_pred HHHHHHHHHHHHHhC------C-CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHH--HcCCEEEEEecc
Confidence 346788999999983 2 2345667777899999999999999999999999999999999 999999988865
Q ss_pred CCCCccC---------ChhhHHHhhccC--ce---EEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc-
Q 038416 130 PEKRWEV---------DLDGVEALADEN--TV---AIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA- 194 (387)
Q Consensus 130 ~~~~~~~---------~~~~l~~~~~~~--~~---~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~- 194 (387)
. +.+++ |++.++++++++ ++ ++++++| |++|.+++ +++|+++|+.++ +++|++|+...
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~ 338 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccc
Confidence 3 34443 899999998743 34 7999999 99999988 667777777653 79999998543
Q ss_pred cCCCCCccccccCC---Ccc-EEEEecCccccccccc-ceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHH
Q 038416 195 FGSTPYVPMGVFGS---IVP-VITLGSISKRWIVPGW-RLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVP 269 (387)
Q Consensus 195 ~~~~~~~~~~~~~~---~~~-~~~i~s~sK~~~~~g~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (387)
+... ......+.. .+. ++++.|+||++ +|+ ..|++.+++.. +.+........ ..+.+++.+..+++.
T Consensus 339 f~~~-~~~~~al~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v~~~i----~~~~~~~~~~~-~~STSpsy~~~Asld 410 (715)
T 3n75_A 339 FSPI-YEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDV----NEETFNEAYMM-HTTTSPHYGIVASTE 410 (715)
T ss_dssp GSGG-GTTSSTTSSSCCTTCEEEEEECHHHHS--SCCTTCEEEEEESCC----CHHHHHHHHHH-TSCSSCCHHHHHHHH
T ss_pred cCCc-cccccccccCcCCCEEEEEEecccccc--cCCCCeeEEEeCchh----hHHHHHHHHHh-hcCCCchHHHHHHHH
Confidence 3221 111111211 122 36689999994 444 45888887531 11122222222 234566676666666
Q ss_pred HHhhhccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038416 270 RIVDETNEAFFAKIIGLLKETADICYERIKEI 301 (387)
Q Consensus 270 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (387)
.++.......-.++.+++.++.+.+++.|+++
T Consensus 411 aA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i 442 (715)
T 3n75_A 411 TAAAMMKGNAGKRLINGSIERAIKFRKEIKRL 442 (715)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 66543222122445566666666777666654
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.80 E-value=1.6e-17 Score=156.03 Aligned_cols=349 Identities=14% Similarity=0.035 Sum_probs=205.6
Q ss_pred cccCCCCCCCCCCCCCCCcHHHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHH
Q 038416 9 TRHSPWPRRPLGVSLLSDSTVAEDAVVDALRTAHYNCYSPTLG-VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIE 87 (387)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~-~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 87 (387)
.|+|..-|.-.....+ .+|.+.+|+++++..-. +++...+ ..+....+|+.+.+.. +.+-+.|++++++++|++
T Consensus 68 ~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGsEA~e 142 (473)
T 4e3q_A 68 RYLDANSGLWNMVAGF-DHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSGSEAND 142 (473)
T ss_dssp EEEETTTTTTTCTTCS-CCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSHHHHHH
T ss_pred EEEEcccCHHHhhccC-CCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCchHHHHH
Confidence 4556544433222222 57889999999887632 2222111 1233444555554433 234568999999999999
Q ss_pred HHHHhhc-------CCC-CeEEEcCCCCcchHHHhhccCCCc-----------eeeeeccCCC---CCccCC--------
Q 038416 88 ISLSVLA-------RPG-ANILIPRPGYPLYEIHAAGSNNNL-----------EARHYDLLPE---KRWEVD-------- 137 (387)
Q Consensus 88 ~~~~~l~-------~~g-~~vl~~~p~~~~~~~~~~~~~~g~-----------~~~~~~~~~~---~~~~~~-------- 137 (387)
.+++... +++ .+|+....+|++...... +..|. ....++.+.. ......
T Consensus 143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~-s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 221 (473)
T 4e3q_A 143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSA-SMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARL 221 (473)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccc-cccccccccccCCCCCcccccCCCcccccccccchhhHHHHHH
Confidence 9998753 233 578889999987433222 01121 1111221100 000011
Q ss_pred hhhHHHhhc---cCceEEEEeCC-CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccE
Q 038416 138 LDGVEALAD---ENTVAIVIINP-GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPV 212 (387)
Q Consensus 138 ~~~l~~~~~---~~~~~v~l~~p-~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (387)
.+++++.+. ++..+.++..| +...|++ +|++.++++.++|++||+++|+||++.+|...|..+.. ..++-...
T Consensus 222 ~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~-e~~gv~PD- 299 (473)
T 4e3q_A 222 ARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGC-VTYDFTPD- 299 (473)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHH-HHTTCCCS-
T ss_pred HHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHH-HhcCCCCC-
Confidence 223444442 24556666666 6667775 56678999999999999999999999998766654332 12222222
Q ss_pred EEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhh--------hhccCCcchHHHHHHHHHhhhccHHHHHHHH
Q 038416 213 ITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGC--------LNAASHPVTFIQAAVPRIVDETNEAFFAKII 284 (387)
Q Consensus 213 ~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 284 (387)
+.+++|.++..++++|.+++++ ++.+.+... ...+++.++++++++.+.|+..+++.+ .
T Consensus 300 --i~t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l---~ 366 (473)
T 4e3q_A 300 --AIISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGL---A 366 (473)
T ss_dssp --EEEECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSH---H
T ss_pred --hHHhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccH---H
Confidence 3357799655559999999976 677766432 124667889999888888876444333 2
Q ss_pred HHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEEecCccccc--CC---CcHHHHHHHHHHhcCeEEEcCCccCCCC
Q 038416 285 GLLKETADICYERIKE---IPCITCPVKPQGAMFVMVKLNVSMLE--DI---GDDLEFCLKLAKEESVIILPGRTVGMKN 356 (387)
Q Consensus 285 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~g~~~~~~~~~~~~~--~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 356 (387)
++.++.-+++.+.|++ .|.+..+ ..-|.++-+.+-..... .+ ......+...+.++|+++.|. .+
T Consensus 367 ~~~~~~g~~l~~~L~~l~~~~~v~~v--RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----g~ 439 (473)
T 4e3q_A 367 ENVRRLAPRFEERLKHIAERPNIGEY--RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL-----GQ 439 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE-----TT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEE--eecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec-----CC
Confidence 3333444455555544 3433311 22355555554221110 00 011233344456779998874 36
Q ss_pred eEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 357 WLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 357 ~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.+|+.+ ..+++++++++++|.++++++.+
T Consensus 440 ~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 440 SVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 889987 46899999999999999988754
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.79 E-value=2.6e-17 Score=154.12 Aligned_cols=336 Identities=16% Similarity=0.105 Sum_probs=196.9
Q ss_pred CcHHHHHHHHHHhcCCCC-CCC-CCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhc--CCCCeEE
Q 038416 26 DSTVAEDAVVDALRTAHY-NCY-SPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLA--RPGANIL 101 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~-~~y-~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~g~~vl 101 (387)
.+|.+.+|+++++..-.. ..+ .+.....+|.+.+++.. + ....+.+++++++++|++.+++... ....+|+
T Consensus 81 ~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii 155 (456)
T 4atq_A 81 SDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGAEAVENAVKVARLATGRDAVV 155 (456)
T ss_dssp TCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEE
Confidence 578999999998875321 111 11112234444444443 1 1124578999999999999998753 2347899
Q ss_pred EcCCCCcchHHHhhccCCC-------------ceeeeeccCC----CCCccCChhhHH-------HhhccCceEEEEeCC
Q 038416 102 IPRPGYPLYEIHAAGSNNN-------------LEARHYDLLP----EKRWEVDLDGVE-------ALADENTVAIVIINP 157 (387)
Q Consensus 102 ~~~p~~~~~~~~~~~~~~g-------------~~~~~~~~~~----~~~~~~~~~~l~-------~~~~~~~~~v~l~~p 157 (387)
....+|++....+. +..+ ..+..+|... ......+.+.++ +.+.++..+.++..|
T Consensus 156 ~~~~~yHG~t~~al-s~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEP 234 (456)
T 4atq_A 156 AFDHAYHGRTNLTM-ALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEP 234 (456)
T ss_dssp EETTCCCCSSHHHH-HHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECS
T ss_pred EEecccCCcccccc-ccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEecc
Confidence 99999987543222 0111 1223333211 011111222222 223344556666666
Q ss_pred -CCCcccc-CCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEee
Q 038416 158 -GNPCGNV-FSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTS 235 (387)
Q Consensus 158 -~nptG~~-~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~ 235 (387)
+...|.. +|++.++++.++|++||+++|+||++.++...|..+. ...++-... +.+++|.+ ..|+++|.++++
T Consensus 235 iqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a-~e~~gv~PD---ivt~gK~l-ggg~P~~av~~~ 309 (456)
T 4atq_A 235 IQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFA-VDHEGVVPD---IITMAKGI-AGGLPLSAITGR 309 (456)
T ss_dssp SBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTCCCS---EEEECGGG-GTTSSCEEEEEE
T ss_pred ccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccccc-ccccCCCCc---hhhhhhcc-cCcCCceeeEec
Confidence 5566765 5677899999999999999999999999876665333 222222222 33677995 578999999997
Q ss_pred CCCCcccchhHHHHHHhhh-hccCCcchHHHHHHHHHhhhccHHHHHHHHHHH-HHHHHHHHHHhhcCCCC--CCCC-CC
Q 038416 236 DPNGILQNSGFVDSIKGCL-NAASHPVTFIQAAVPRIVDETNEAFFAKIIGLL-KETADICYERIKEIPCI--TCPV-KP 310 (387)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~--~~~~-~~ 310 (387)
+ ++.+.+.... ..+++.++.+.+++.+.|+..+++.+.++.+.+ ....+.+.+..++++.. ..+. ..
T Consensus 310 ~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VR 381 (456)
T 4atq_A 310 A--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIR 381 (456)
T ss_dssp H--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEE
T ss_pred H--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEee
Confidence 6 5666554443 356788999999998888765443333322222 22233333333333211 1110 11
Q ss_pred CceEEEEEecCcccc--cCCCcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHHHHHHHHHh
Q 038416 311 QGAMFVMVKLNVSML--EDIGDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 311 ~~g~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~l~~~~~~~ 383 (387)
.-|.++-+.+..+.. +...-...+...+ .++|+.+.+... .++.+|+.+. .+++++++++++|.++++.+
T Consensus 382 G~Gl~~giel~~~~~~~~~~~~~~~v~~~~-~~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 382 GRGAMLAIELVQPGSKEPNAELTKAVAAAC-LKEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp EETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ecceEEEEEEecCCCCCcCHHHHHHHHHHH-HHCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 335666666643211 1100122344444 567999876432 2468999984 68999999999999999864
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.79 E-value=1.7e-16 Score=143.74 Aligned_cols=337 Identities=15% Similarity=0.061 Sum_probs=210.3
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCC------CCCcHHHHHHHHHHHhhcCCCCCCCC--CEEEcCChHHHHHHHHHhhcCC
Q 038416 25 SDSTVAEDAVVDALRTAHYNCYSP------TLGVPSARRGIADYLNRDLPYKLSPE--DVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
-+++.|.+++-+.+.+...-+||. -.-..+++....+...+.|+...... +|-. .|+++|+.+++.+|++|
T Consensus 65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP-~SGs~AN~avy~All~P 143 (490)
T 3ou5_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQP-YSGSPANLAVYTALLQP 143 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCC-SSHHHHHHHHHHHHCC-
T ss_pred cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCc-CCHHHHHHHHHHHHcCC
Confidence 477888888888888765555553 12244566666666666666332222 2333 45788999999999999
Q ss_pred CCeEEEcCCCCcchHHHh------hccCCC--ceeeeeccCCCCCccCChhhHHHhhcc-CceEEEEeCCCCCccccCCH
Q 038416 97 GANILIPRPGYPLYEIHA------AGSNNN--LEARHYDLLPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSY 167 (387)
Q Consensus 97 g~~vl~~~p~~~~~~~~~------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~ 167 (387)
||+|+..+..+.+..... ..+..| .+...+++++++ ..+|.+++++.... ++++|+.-....|- .++
T Consensus 144 GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t-~~IDyd~~~~~A~~~kPklIi~G~SaY~r--~id- 219 (490)
T 3ou5_A 144 HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKT-GLIDYNQLALTARLFRPRLIIAGTSAYAR--LID- 219 (490)
T ss_dssp CCCEECBC----------------------------CBCEETTT-TEECHHHHHHHHHHHCCSEEEECCSSCCS--CCC-
T ss_pred CCEEEecccCCCCcccccccCCCcccccccccccccccccCCCC-CcccHHHHHHHHhhcCCCeEEECCccCcc--ccC-
Confidence 999998877666542221 111223 345666666543 47999999997654 67777655444433 233
Q ss_pred HHHHHHHHHHHhcCcEEeeccccc-ccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEeeCCCCcc----c
Q 038416 168 QHLQKIARTARNLGIIVIADEVYN-HLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGIL----Q 242 (387)
Q Consensus 168 ~~~~~l~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~----~ 242 (387)
.+++.++|.+.|.++++|-+|. +++-.|.-+.|+.. .+ ++.+|.+|+ ++|.|.|.|++++...-. +
T Consensus 220 --~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~--AD---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k~~ 290 (490)
T 3ou5_A 220 --YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--AD---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPKTG 290 (490)
T ss_dssp --HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CS---EEEEESSST--TCSCSCEEEEEECSEEEECC--C
T ss_pred --HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc--ce---EEecccccc--ccCCCceEEEecccccccccccc
Confidence 7888888889999999999998 56666655666543 23 888999998 789999999987621000 0
Q ss_pred c---hhHHHHHHhhhh--ccCCcchHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 038416 243 N---SGFVDSIKGCLN--AASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCITCPVKPQGAMFVM 317 (387)
Q Consensus 243 ~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 317 (387)
+ .++.+++.+.-. .-+++.....++.+.++.+.....++...+++.+|++.|.+.|.+. |+.++........++
T Consensus 291 ~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvL 369 (490)
T 3ou5_A 291 REIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVL 369 (490)
T ss_dssp CEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE
T ss_pred chhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEE
Confidence 0 034555544321 2234444444554444544334567888999999999999999988 788665555666777
Q ss_pred EecCcccccCCCcHHHHHHHHHHhcCeEEE----cCCccC-CCCeEEEEe------eCChHhHHHHHHHHHHHHH
Q 038416 318 VKLNVSMLEDIGDDLEFCLKLAKEESVIIL----PGRTVG-MKNWLRIAF------AAEPATLEDGLERIKAFCQ 381 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~~Ri~~------~~~~e~~~~~~~~l~~~~~ 381 (387)
+++..... + ...+..+|.+.||.++ |+.... .+..+||+. +..++++.++.+.|.+++.
T Consensus 370 vDl~~~g~----t-G~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 370 VDLRPKGL----D-GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EECGGGTC----C-HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EeccccCC----C-HHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 77754322 2 3556667788999987 443211 145799999 2467888888888877664
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.76 E-value=3e-16 Score=142.83 Aligned_cols=307 Identities=13% Similarity=0.064 Sum_probs=190.9
Q ss_pred HHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC----CCeEEEcCCCCcchHHHhhccCCCceeeeeccCC-CCC
Q 038416 59 IADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP----GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLP-EKR 133 (387)
Q Consensus 59 ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 133 (387)
+.+|++. .|++ .....++++|+|.++.+++.+.+++ +|.|+++..+|.+....+. ..|+++++++... .+.
T Consensus 122 ~ld~L~~-~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAli--L~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 122 VLDIIKL-AGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI--TAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHH-TTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHH--HTTCEEEEECEEEETTE
T ss_pred HHHHHHH-cCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHH--HcCCeEEEEeeeecccc
Confidence 3445554 3654 2346889999997777777776653 4999999999999999999 9999999886522 235
Q ss_pred ccCChhhHHHhhcc---CceEEEEeCC-CCCccccCCHHHHHHHHHHHHhcCcEEeecccccccc-cCCCCCccccccC-
Q 038416 134 WEVDLDGVEALADE---NTVAIVIINP-GNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLA-FGSTPYVPMGVFG- 207 (387)
Q Consensus 134 ~~~~~~~l~~~~~~---~~~~v~l~~p-~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~- 207 (387)
..+|++.++++++. ...+++++.+ .+..|.+ +++++|+++|++||+++++|++|+... +....+.....+.
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~Gr 274 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR 274 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCC
Confidence 68899999999865 3344455544 4434444 349999999999999999999998643 1111111122232
Q ss_pred CCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHHHHHHH
Q 038416 208 SIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLL 287 (387)
Q Consensus 208 ~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 287 (387)
.| +++.|.+|.+.++ +..+.+..++ +++++++..... ...+....+.+...+.......+.+..++.
T Consensus 275 AD---~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~lGr~Gy~~ll~e~ 341 (501)
T 3hl2_A 275 ID---AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMYP--GRASASPSLDVLITLLSLGSNGYKKLLKER 341 (501)
T ss_dssp CC---EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTSC--SCBCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc---EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 7888999996554 3334444544 356666644432 222222223222233334456678888888
Q ss_pred HHHHHHHHHHhhcCC---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcCeE---E-EcCC----------
Q 038416 288 KETADICYERIKEIP---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVI---I-LPGR---------- 350 (387)
Q Consensus 288 ~~~~~~~~~~l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v-~~g~---------- 350 (387)
.++.+++++.|+++. +-.+...|.....+.+.+.........+..++--.| ..++|. + .+|.
T Consensus 342 ~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~L-f~r~vsG~Rvv~~~~~~~i~g~~f~ 420 (501)
T 3hl2_A 342 KEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSML-FTRQVSGARVVPLGSMQTVSGYTFR 420 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHH-HHTTCCSCEEECTTCCEEETTEEES
T ss_pred HHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHH-HhcCCCcceeecCCCceEECCeeec
Confidence 888888888887742 333333444444455555432111111233444433 444442 3 3443
Q ss_pred ccCC------CCeEEEEe--eCChHhHHHHHHHHHHHHHHhhhc
Q 038416 351 TVGM------KNWLRIAF--AAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 351 ~~~~------~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
.|+. ..++-++. +.+++|++..+++|.+++++++++
T Consensus 421 ~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp STTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2332 25677776 568999999999999999998865
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.75 E-value=1.7e-17 Score=166.13 Aligned_cols=330 Identities=15% Similarity=0.093 Sum_probs=195.2
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCC-CCCEEEcCChHHHHHHHHHhhc-----CC----
Q 038416 27 STVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVLA-----RP---- 96 (387)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~-----~~---- 96 (387)
+|.+.+|+++++..- .++.......+....+++.+.+..+ .. -+.++++++|++|++.+++... .+
T Consensus 399 ~p~i~~Ai~~Q~~~l--~h~~~~~~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~ 474 (831)
T 4a0g_A 399 QAELAREMGYTAARF--GHVMFPENVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCE 474 (831)
T ss_dssp HHHHHHHHHHHHHHH--SSCCCTTEECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CHHHHHHHHHHHhhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCc
Confidence 799999999988752 1221111112333455555544322 12 4689999999999999998862 12
Q ss_pred --------CCeEEEcCCCCcchHHHhhccCCCcee----------------------------eeeccCCC------C--
Q 038416 97 --------GANILIPRPGYPLYEIHAAGSNNNLEA----------------------------RHYDLLPE------K-- 132 (387)
Q Consensus 97 --------g~~vl~~~p~~~~~~~~~~~~~~g~~~----------------------------~~~~~~~~------~-- 132 (387)
..+|+....+|++....+. +..|... ..++.+.. +
T Consensus 475 ~~~~~~~~r~~iI~~~~syHG~T~gal-s~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~ 553 (831)
T 4a0g_A 475 ATEEEKHIVVKVIALRGSYHGDTLGAM-EAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYG 553 (831)
T ss_dssp -------CCEEEEEETTCCCCSSHHHH-HTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTT
T ss_pred cccccccCccEEEEecCCcccCceeee-eccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccc
Confidence 2378888888886432222 0222110 01111100 0
Q ss_pred CccCC------------------hhhHHHhhc-------cCceEEEEeCC--CCCcccc-CCHHHHHHHHHHHHhcCcEE
Q 038416 133 RWEVD------------------LDGVEALAD-------ENTVAIVIINP--GNPCGNV-FSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 133 ~~~~~------------------~~~l~~~~~-------~~~~~v~l~~p--~nptG~~-~~~~~~~~l~~~~~~~~~~l 184 (387)
.+ -+ .+.|++.++ +...+.++..| ++..|.. +|++.+++|.++|++||+++
T Consensus 554 ~~-~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilL 632 (831)
T 4a0g_A 554 TF-TSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPV 632 (831)
T ss_dssp EE-SCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCE
T ss_pred cc-cchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeE
Confidence 00 01 245666664 23445556666 6777775 57888999999999999999
Q ss_pred eecccccccccCCCCCccccccCCCccEEEEecCcccccccc-cceEEEEeeCCCCcccchhHHHHHHhh-------hhc
Q 038416 185 IADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPG-WRLGWLVTSDPNGILQNSGFVDSIKGC-------LNA 256 (387)
Q Consensus 185 i~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g-~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~ 256 (387)
|+||++.+|+..|..+. ...++.... +.+++|.++. | +++|++++++ ++.+.+... ...
T Consensus 633 I~DEV~tGfGRtG~~fa-~e~~gv~PD---iitlsK~L~g-G~~Plgav~~~~--------~i~~~~~~~~~~~~~~hg~ 699 (831)
T 4a0g_A 633 IFDEVFTGFWRLGVETT-TELLGCKPD---IACFAKLLTG-GMVPLAVTLATD--------AVFDSFSGDSKLKALLHGH 699 (831)
T ss_dssp EEECTTTTTTTTSBSST-HHHHSSCCS---EEEECGGGGT-TSSCCEEEEECH--------HHHHTTCSSCGGGSCCCCC
T ss_pred EEEcCccccccCCCchh-hHhcCCCCc---EEEEeccccc-CccCcEEEEECH--------HHHHHHhcccccccceeec
Confidence 99999999877775442 222222222 3368999754 6 7999999986 677776542 124
Q ss_pred cCCcchHHHHHHHHHhhhccHHHHHHHH----HHHHH-HHHHHHHHhhcCCCCCCCCCCCceEEEEEecCcccc-c--CC
Q 038416 257 ASHPVTFIQAAVPRIVDETNEAFFAKII----GLLKE-TADICYERIKEIPCITCPVKPQGAMFVMVKLNVSML-E--DI 328 (387)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~ 328 (387)
+++.++++++++.+.|+..+++.+.+.. +++++ ..+.+.+.+++.|.+..+ ...|.++.+.+..... . ..
T Consensus 700 T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v--rg~Gl~~~iel~~~~~~~~~~~ 777 (831)
T 4a0g_A 700 SYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV--VVIGTLFALELKADASNSGYAS 777 (831)
T ss_dssp TTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE--EEETTEEEEEEC---------C
T ss_pred CCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE--eecccEEEEEEecCccccccch
Confidence 5677888888888877643221111111 11111 012334455566554422 2345566666532100 0 00
Q ss_pred CcHHHHHHHHHHhcCeEEEcCCccCCCCeEEEEe--eCChHhHHHHHHHHHHHHHHh
Q 038416 329 GDDLEFCLKLAKEESVIILPGRTVGMKNWLRIAF--AAEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~ 383 (387)
.....+...+ .++||.+.|+ .+.+|+++ .++++++++++++|.++++++
T Consensus 778 ~~a~~~~~~l-~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 778 LYAKSLLIML-REDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHH-HHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHH-HHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1123455554 5679999885 47899996 568999999999999988765
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.73 E-value=8.8e-16 Score=141.66 Aligned_cols=317 Identities=11% Similarity=0.024 Sum_probs=187.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC----CCCeEEEcCCCCcchHHHhhccCCCceeeeec
Q 038416 52 VPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR----PGANILIPRPGYPLYEIHAAGSNNNLEARHYD 127 (387)
Q Consensus 52 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~ 127 (387)
...+.+.+..++.+..|.+ +....++++|+|.+..+++.+.++ +++.|+++..+|.++...+. ..|+++++++
T Consensus 96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~--l~Gl~p~~v~ 172 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV--TAGFEPVVIE 172 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHH--HTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHH--HcCCeeEEEE
Confidence 3456667777777766643 223457788887444444444333 37899999999999999999 9999988886
Q ss_pred cCC-CCCccCChhhHHHhhcc---CceEEEEeCCC-CCccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 128 LLP-EKRWEVDLDGVEALADE---NTVAIVIINPG-NPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 128 ~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~-nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
..+ ++...+|++.++++++. +.+++++.+|+ +.+|.+ +++++|+++|++||+++++|++|+.+...... .+
T Consensus 173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~-l~ 248 (450)
T 3bc8_A 173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMH-LI 248 (450)
T ss_dssp CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HH
T ss_pred eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHh-HH
Confidence 532 23568999999999964 34566666664 455666 44999999999999999999999863311000 00
Q ss_pred ccccCCCccEEEEecCcccccccccceEEEEeeCCCCcccchhHHHHHHhhhhccCCcchHHHHHHHHHhhhccHHHHHH
Q 038416 203 MGVFGSIVPVITLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAK 282 (387)
Q Consensus 203 ~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 282 (387)
-..+....-..++.|++|++ +.....+++..++ ++..+++........+.+ ++.......+. ...+.+.+
T Consensus 249 ~~a~~~~~AD~~v~S~HK~l-~a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~S-psL~l~~~l~~-~G~~g~~~ 318 (450)
T 3bc8_A 249 QQGARVGRIDAFVQSLDKNF-MVPVGGAIIAGFN-------EPFIQDISKMYPGRASAS-PSLDVLITLLS-LGCSGYRK 318 (450)
T ss_dssp HHHHHHSCCCEEEEEHHHHH-SCCSSCEEEEESC-------HHHHHHHHHHSCSCBCSH-HHHHHHHHHHH-HHHHHHHH
T ss_pred HHHhcccCCCEEEECCccCC-CchhccEEEEecC-------HHHHHHHHHHhhcCCccc-HHHHHHHHHHH-HHHHHHHH
Confidence 01120001126778999995 4445667777654 345555544331111222 23333333333 24455666
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEEecCcccccCCCcHHHHHHHHHHhcC---eEEEc--------
Q 038416 283 IIGLLKETADICYERIKEIP---CITCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEES---VIILP-------- 348 (387)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---i~v~~-------- 348 (387)
..++..++++++++.+++++ +..+...+..+.-..+.++........+...+...+ ...| .-+.+
T Consensus 319 ~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~ 397 (450)
T 3bc8_A 319 LLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVS 397 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEET
T ss_pred HHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchh
Confidence 76777777778888777765 665443232211112222211100011344555444 3334 33321
Q ss_pred CCcc---C------CCCeEEEEe--eCChHhHHHHHHHHHHHHHHhhhc
Q 038416 349 GRTV---G------MKNWLRIAF--AAEPATLEDGLERIKAFCQRHAKK 386 (387)
Q Consensus 349 g~~~---~------~~~~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~~ 386 (387)
|..| + ...++-+.+ +.+++++++++++|+++.++++++
T Consensus 398 ~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 398 GHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp TEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1111 1 134555555 568999999999999988777653
No 237
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=88.66 E-value=3.8 Score=29.92 Aligned_cols=103 Identities=13% Similarity=0.014 Sum_probs=63.8
Q ss_pred CEEEcCChHHHHHHHHHh---hcC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCc
Q 038416 75 DVYLTLGCSQAIEISLSV---LAR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT 149 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~---l~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 149 (387)
+++....+...+..++-. +.+ .+.-|+...|.+..+...+. ..|+....+-.....+..-.+...|++++.+.
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~--~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~ 83 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLR--RAGLNRERILLLQAKDNAAALALSCEALRLGR 83 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHH--HTTCCTTSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHH--HcCCChHHEEEEECCCcHHHHHHHHHHHhcCC
Confidence 344444444434444433 333 45667777888888888888 88876544432222221223567778888877
Q ss_pred eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 150 ~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
..+++..+.. ++..+.+++.-.|++.+.+.
T Consensus 84 ~~aVl~wl~~-----l~~~~~RRLqlAA~~g~~~~ 113 (119)
T 1ofu_X 84 SHTVVSWLEP-----LSRAARKQLSRAAQLGQAQS 113 (119)
T ss_dssp EEEEEECCSS-----CCHHHHHHHHHHHHHHTCEE
T ss_pred ccEEEECCCc-----CChHHHHHHHHHHHhCCCeE
Confidence 7777776442 67788899988888776654
No 238
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=88.36 E-value=5.4 Score=30.82 Aligned_cols=103 Identities=13% Similarity=0.014 Sum_probs=64.9
Q ss_pred CEEEcCChHHHHHHHHHhh---cC--CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCc
Q 038416 75 DVYLTLGCSQAIEISLSVL---AR--PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT 149 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l---~~--~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 149 (387)
+++....+...+..+.-.+ .+ .+..|+...|-+..+...+. ..|+....+-+....+..-.+...|++++.+.
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~--~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~ 125 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLR--RAGLNRERILLLQAKDNAAALALSCEALRLGR 125 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHH--HTTCCGGGEEEECCSSTTHHHHHHHHHHHTTC
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHH--HcCCCHHHEEEEECCChHHHHHHHHHHHhcCC
Confidence 5555544444343333333 22 45567777777888888888 88887654433222221224567788888888
Q ss_pred eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE
Q 038416 150 VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 150 ~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l 184 (387)
..+++..... ++..+.+++.-.|++.+.+.
T Consensus 126 ~~aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~~ 155 (161)
T 1oft_A 126 SHTVVSWLEP-----LSRAARKQLSRAAQLGQAQS 155 (161)
T ss_dssp EEEEEECCSS-----CCHHHHHHHHHHHHHTTCEE
T ss_pred ccEEEECCCc-----CChHHHHHHHHHHHhCCCeE
Confidence 7777776542 67788999988888776654
No 239
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=70.32 E-value=22 Score=33.36 Aligned_cols=110 Identities=17% Similarity=0.237 Sum_probs=60.7
Q ss_pred CCCCCEEEcCChHHHHHHHHHhhc---CC---------C-C-----eEEEcCCCCcc-------------------hHHH
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVLA---RP---------G-A-----NILIPRPGYPL-------------------YEIH 113 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l~---~~---------g-~-----~vl~~~p~~~~-------------------~~~~ 113 (387)
++++.|.++.++..++.-.+.+|. .. | . ..+...|-|.- +.+.
T Consensus 128 v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~ 207 (525)
T 3gh5_A 128 TTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDL 207 (525)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHHHH
Confidence 445677888777777777776653 21 1 1 12334554431 2233
Q ss_pred hhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 114 AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+. ..++++..+.+.+..+|.+..+..-++-..... .......|-.++.+++++|++.|+++||-||-
T Consensus 208 mA--~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 208 AS--QYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HH--TTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HH--HcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 33 566666666665444554443332221111100 00112235678999999999999999998874
No 240
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=68.08 E-value=11 Score=30.71 Aligned_cols=102 Identities=13% Similarity=0.085 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcc---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPL---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 159 (387)
++++..+ .-+...|.++++..|.-.. -..... ..|.....+++. +..++.+.+..+..+|++-..++
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~S--r~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEaQF 112 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVS--HNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEVQF 112 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------C--BTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCGGG
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHH--hcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEechhc
Confidence 3455554 4444567777777665432 223444 677666555542 22334443444667777777665
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++.+.+..+.+++ ..|+.||+=..-.+|. +.++..
T Consensus 113 -----f~~~~v~~l~~la-~~gi~Vi~~GLd~DF~--~~~F~~ 147 (219)
T 3e2i_A 113 -----FDDEIVSIVEKLS-ADGHRVIVAGLDMDFR--GEPFEP 147 (219)
T ss_dssp -----SCTHHHHHHHHHH-HTTCEEEEEEESBCTT--SCBCTT
T ss_pred -----CCHHHHHHHHHHH-HCCCEEEEeecccccc--cCCCcc
Confidence 6656677888888 5799999877766643 555554
No 241
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=65.65 E-value=19 Score=30.52 Aligned_cols=96 Identities=11% Similarity=0.084 Sum_probs=54.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----C
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----N 148 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 148 (387)
.-+++|.+++.-=..+...|.+.|-+|++..-.-.......+ ..|.+...+..+.. |.++++++++. .
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~--~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA--EIGGGAVGIQADSA-----NLAELDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcC
Confidence 345556555555556666778899888876544334444555 55666666665432 55555554432 2
Q ss_pred ceEEEEeCC-CCCccc--cCCHHHHHHHHHH
Q 038416 149 TVAIVIINP-GNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 149 ~~~v~l~~p-~nptG~--~~~~~~~~~l~~~ 176 (387)
..=++++|. .++.+- -++.++++++.++
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 222445554 233322 2577888888875
No 242
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=61.03 E-value=35 Score=28.08 Aligned_cols=96 Identities=20% Similarity=0.082 Sum_probs=51.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++....-........ ..+.++..+..+. -|.++++++++.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA--SIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--HHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 356666655554456666777889888876544433444444 3455555555432 255555554432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+....+.+. -.+.++++++.++
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444544333333222 3466777666653
No 243
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=59.84 E-value=48 Score=27.35 Aligned_cols=96 Identities=16% Similarity=0.024 Sum_probs=44.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA--ELGAAVRFRNADVT-----NEADATAALAFAKQEFG 80 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--HhCCceEEEEccCC-----CHHHHHHHHHHHHHHcC
Confidence 455666665554556666677889888775444433344444 44545555554322 45555554432
Q ss_pred CceEEEEeCCCCCccc------cCCHHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN------VFSYQHLQKIART 176 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~------~~~~~~~~~l~~~ 176 (387)
+...++.+....+.+. ..+.+++.+..++
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 3344443332222221 2455666666553
No 244
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.45 E-value=55 Score=27.31 Aligned_cols=100 Identities=17% Similarity=0.064 Sum_probs=53.3
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
+...+++|.++..-=..+...|.+.|.+|++..-.-....+... ....|.++..+..+-. |.++++++++.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHH
Confidence 34455666665555566666778899888886543222222221 1145667776665432 45555554432
Q ss_pred --CceEEEEeCC-CCCccc--cCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINP-GNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p-~nptG~--~~~~~~~~~l~~~ 176 (387)
...=++++|. ..+.+- -++.++++++.++
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 1222344554 222222 3677888887774
No 245
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=56.86 E-value=32 Score=32.17 Aligned_cols=27 Identities=30% Similarity=0.523 Sum_probs=23.3
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|.+..++.+++++|++.|+++||-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 335679999999999999999998874
No 246
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=56.82 E-value=60 Score=27.12 Aligned_cols=99 Identities=15% Similarity=0.004 Sum_probs=49.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc--hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL--YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 147 (387)
.+..-+++|.+++.-=..+...|.+.|-+|++..-.-.. ...... ..+.+...+.++.. |.++++++++.
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~v~~~ 77 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA--QRQPRATYLPVELQ-----DDAQCRDAVAQT 77 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH--HHCTTCEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH--hcCCCEEEEEeecC-----CHHHHHHHHHHH
Confidence 333344555544443355566777888777664332221 122233 34556666665432 45555544432
Q ss_pred ----CceEEEEeCCC--CCccccCCHHHHHHHHHH
Q 038416 148 ----NTVAIVIINPG--NPCGNVFSYQHLQKIART 176 (387)
Q Consensus 148 ----~~~~v~l~~p~--nptG~~~~~~~~~~l~~~ 176 (387)
...=++++|.. .+...-.+.+++.+..++
T Consensus 78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 22224455542 233344677777777664
No 247
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=56.81 E-value=42 Score=28.16 Aligned_cols=94 Identities=12% Similarity=0.003 Sum_probs=49.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------C
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------N 148 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 148 (387)
.+++|.++..-=..+.+.|.+.|.+|++....-........ ..+.++..+.++.. |.++++++++. +
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA--AYPDRAEAISLDVT-----DGERIDVVAADVLARYGR 79 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH--HCTTTEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hccCCceEEEeeCC-----CHHHHHHHHHHHHHhCCC
Confidence 45666655544455666677889888876554444455544 44545555554322 45555554432 3
Q ss_pred ceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 149 TVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 149 ~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
...++.+....+.+. ..+.+++++..+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 445544333222221 345566665554
No 248
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=56.64 E-value=41 Score=28.35 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=51.1
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+. -|.++++++++.
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN--EIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--HHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3456666655554556666777889888776543333334444 3454555555432 255665555432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. ..+.++++++.++
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 3444444333322222 3566777766553
No 249
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=56.55 E-value=53 Score=26.50 Aligned_cols=95 Identities=9% Similarity=-0.053 Sum_probs=51.3
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceE
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVA 151 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~ 151 (387)
.+++|.++..-=..+.+.|.+.|.+|++....-........ ..+.++..+..+. -+.++++++++. ....
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN--CLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--TCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCE
Confidence 36667666555556666677888777776544434444455 4455555555432 256666665543 2244
Q ss_pred EEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 152 IVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 152 v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
++.+....+.+. -.+.+++++..+.
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 543333322222 3566777666653
No 250
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=54.69 E-value=64 Score=26.77 Aligned_cols=94 Identities=11% Similarity=0.022 Sum_probs=51.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----Cc
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NT 149 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 149 (387)
.+++|.+++.-=..+...|.+.|.+|++.+-.-....+.. ..+.+...+..+.. |.+++++.++. ..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA---KERPNLFYFHGDVA-----DPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---TTCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcCCEEEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 4667766666556667778889988887654332223333 34555565555322 45555554432 22
Q ss_pred eEEEEeCC-CCCccc--cCCHHHHHHHHHH
Q 038416 150 VAIVIINP-GNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 150 ~~v~l~~p-~nptG~--~~~~~~~~~l~~~ 176 (387)
.=+++.|. .++.+. -++.++++++.++
T Consensus 76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CCEEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 22344554 333333 3577888877765
No 251
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=54.03 E-value=52 Score=27.82 Aligned_cols=50 Identities=18% Similarity=0.124 Sum_probs=39.8
Q ss_pred CccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecc
Q 038416 133 RWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 133 ~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
+|.+|..++.++...+..+|++... .++.++++++.+.|++.|+-+++|-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4567888888887778888877654 3567889999999999999887764
No 252
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=53.91 E-value=25 Score=29.86 Aligned_cols=68 Identities=24% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+.++. -|.++++++++.
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--TMAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--TSSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HhcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 3456677665555556666777888888776544333444445 5555666665542 256777766653
No 253
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=53.05 E-value=47 Score=27.49 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=49.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+. -|.++++++++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA--EIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 456676665555556666777889888776544333334444 3344445554432 255655554432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+...++.+....+.+. -.+.+++++..+
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3445544333322222 346666666554
No 254
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=52.11 E-value=81 Score=26.24 Aligned_cols=96 Identities=18% Similarity=0.023 Sum_probs=50.8
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA--SVGRGAVHHVVDLT-----NEVSVRALIDFTIDTF 83 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH--HHCTTCEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--HhCCCeEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 3456666665554456666777889888776555444555555 44555555544322 45555555432
Q ss_pred -CceEEEEeCCCC-C-cc--ccCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGN-P-CG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~n-p-tG--~~~~~~~~~~l~~ 175 (387)
+..+++.+.... + .+ .-++.+++++..+
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 334444333222 2 11 1346666666555
No 255
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=51.58 E-value=28 Score=30.52 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=48.1
Q ss_pred CCCCcchHHHhhccCC-CceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 104 RPGYPLYEIHAAGSNN-NLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
.|.|.+..+... .. +..+..+-+++. .-.+.+.+++. .+.+.+++.... ++.++.+++.++|+++|
T Consensus 64 vpvy~sv~ea~~--~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G------~~e~~~~~l~~~a~~~g 131 (334)
T 3mwd_B 64 IPVFKNMADAMR--KHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEG------IPEALTRKLIKKADQKG 131 (334)
T ss_dssp EEEESSHHHHHH--HCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSC------CCHHHHHHHHHHHHHHT
T ss_pred ceeeCCHHHHhh--cCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCC------CCHHHHHHHHHHHHHcC
Confidence 356666666555 33 344444333222 12356666676 677777665533 44477889999999999
Q ss_pred cEEeecccccc
Q 038416 182 IIVIADEVYNH 192 (387)
Q Consensus 182 ~~li~D~~~~~ 192 (387)
+.+|==.+.+.
T Consensus 132 ~rliGPNc~Gi 142 (334)
T 3mwd_B 132 VTIIGPATVGG 142 (334)
T ss_dssp CEEECSSCCCE
T ss_pred CEEEccCCccc
Confidence 98887666654
No 256
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=51.22 E-value=74 Score=23.74 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=63.9
Q ss_pred CEEEcCCh--HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 75 DVYLTLGC--SQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 75 ~i~~~~g~--~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
.++++-+- -..+.-+.+.|.+-|-+++.+. +....++ ..|+++..+.-..+++..-+..++.+.+..+..-+
T Consensus 26 gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~--~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~l 99 (143)
T 2yvq_A 26 GILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLN--ANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDL 99 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHH--HTTCCCEEECCGGGC-----CBCHHHHHHTTSCCE
T ss_pred CEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHH--HcCCeEEEEEeccCCCcccccccHHHHHHCCCceE
Confidence 37777554 5556666667777787777665 3445667 78888877753222211001134666676665555
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
++..|.. . ..+..+-..|.+.|-+++++++..
T Consensus 100 VInt~~~-~--~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 100 VINLPNN-N--TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp EEECCCC-C--GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred EEECCCC-C--CcCCccHHHHHHHHHHhCCCeEcC
Confidence 5666542 1 233677889999999999998864
No 257
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=51.15 E-value=45 Score=28.10 Aligned_cols=96 Identities=11% Similarity=-0.011 Sum_probs=49.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT--KIGCGAAACRVDVS-----DEQQIIAMVDACVAAFG 102 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--HHCSSCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HcCCcceEEEecCC-----CHHHHHHHHHHHHHHcC
Confidence 345666555544455666677889888776543333344444 34555555554322 45555554432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+....+.+. -.+.++++++.++
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3444543333222222 3466777666553
No 258
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=51.06 E-value=90 Score=25.62 Aligned_cols=66 Identities=14% Similarity=-0.077 Sum_probs=35.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD 146 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 146 (387)
..+++|.++...=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~v~~~~~ 78 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK--KLGNNCVFAPADVT-----SEKDVQTALA 78 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH--HHCTTEEEEECCTT-----CHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH--HhCCceEEEEcCCC-----CHHHHHHHHH
Confidence 456666655544456666677788877765433333444444 33445555554322 4556555543
No 259
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=50.42 E-value=58 Score=27.03 Aligned_cols=99 Identities=14% Similarity=-0.003 Sum_probs=54.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCC-cchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCc
Q 038416 71 LSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGY-PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENT 149 (387)
Q Consensus 71 ~~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 149 (387)
.+...+++|.+++.-=..+.+.|.+.|-+|++..-.- .......+ ..|.+...+..+.. |.++.++.++...
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~--~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA--KDGGNASALLIDFA-----DPLAAKDSFTDAG 79 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTT-----STTTTTTSSTTTC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH--HhCCcEEEEEccCC-----CHHHHHHHHHhCC
Confidence 3344455565555555566667788898877654322 22334445 57777777665432 3344444444333
Q ss_pred eEEEEeCCC-CCcc--ccCCHHHHHHHHHH
Q 038416 150 VAIVIINPG-NPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 150 ~~v~l~~p~-nptG--~~~~~~~~~~l~~~ 176 (387)
.=++++|.. .+.+ .-++.++++++.++
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 334555552 2222 23678888888875
No 260
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=50.13 E-value=19 Score=30.07 Aligned_cols=51 Identities=20% Similarity=0.312 Sum_probs=39.8
Q ss_pred CccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 133 RWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 133 ~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
+|.+|.-++.++...+..+|.+... .++.++++++.+.|++.|+.+++|-.
T Consensus 108 Dfi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 108 DFYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp CCCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred eCCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 4677878888766667777776553 46778899999999999999988843
No 261
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=50.11 E-value=86 Score=25.77 Aligned_cols=97 Identities=13% Similarity=-0.048 Sum_probs=49.3
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+.++.. |.++++++++.
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADAH 81 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHhh
Confidence 3456666666555556666777889888776543333222222 0034556666665432 45555554431
Q ss_pred -CceEEEEeCC-CCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINP-GNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p-~nptG~--~~~~~~~~~l~~ 175 (387)
...++ +.+. ....+. -.+.+++++..+
T Consensus 82 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVT-IFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 23333 4443 222222 256666666554
No 262
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=49.39 E-value=13 Score=31.00 Aligned_cols=78 Identities=10% Similarity=0.097 Sum_probs=49.4
Q ss_pred EEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 100 ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 100 vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
|++....|.+....+. ... +...+|+. ..+|-+|+.++.++-.-+..+|+++. ..++.++++++.+.|++
T Consensus 82 VLTd~~~F~Gs~~~L~--~vr-~~v~lPvL-rKDFiid~yQI~eAr~~GADaILLI~------a~L~~~~l~~l~~~A~~ 151 (258)
T 4a29_A 82 ITTEEKYFNGSYETLR--KIA-SSVSIPIL-MSDFIVKESQIDDAYNLGADTVLLIV------KILTERELESLLEYARS 151 (258)
T ss_dssp EECCSTTTCCCHHHHH--HHH-TTCSSCEE-EESCCCSHHHHHHHHHHTCSEEEEEG------GGSCHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCHHHHH--HHH-HhcCCCEe-eccccccHHHHHHHHHcCCCeeehHH------hhcCHHHHHHHHHHHHH
Confidence 4444444544433333 111 12234443 35788999999887655677776544 34778899999999999
Q ss_pred cCcEEeec
Q 038416 180 LGIIVIAD 187 (387)
Q Consensus 180 ~~~~li~D 187 (387)
.|+-++++
T Consensus 152 lGl~~LvE 159 (258)
T 4a29_A 152 YGMEPLIL 159 (258)
T ss_dssp TTCCCEEE
T ss_pred HhHHHHHh
Confidence 99876663
No 263
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=48.92 E-value=48 Score=27.70 Aligned_cols=96 Identities=13% Similarity=-0.014 Sum_probs=48.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA--DLGKDVFVFSANLS-----DRKSIKQLAEVAEREM 99 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCSSEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCceEEEEeecC-----CHHHHHHHHHHHHHHc
Confidence 3456666665554556666777889888776543333344444 44556666555322 55555554432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+......+. ..+.+++++..+
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444443332222222 234455555544
No 264
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=48.77 E-value=49 Score=27.72 Aligned_cols=65 Identities=15% Similarity=0.031 Sum_probs=36.3
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++..+.++.. |.+++++++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~-----~~~~v~~~~ 95 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD--ELGNRAEFVSTNVT-----SEDSVLAAI 95 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--HhCCceEEEEcCCC-----CHHHHHHHH
Confidence 356666665555556666777889888776543333344444 34545555554322 455555544
No 265
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=48.10 E-value=26 Score=30.12 Aligned_cols=50 Identities=20% Similarity=0.273 Sum_probs=36.5
Q ss_pred ChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 137 DLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
-++.++++++.+.+.+++... | ++.++.+++.+.|+++++.++-..+...
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~Gi 133 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQKGATIIGPNCPGA 133 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSSCEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCCee
Confidence 456677777778886655432 3 3567789999999999998887776654
No 266
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=47.94 E-value=59 Score=26.86 Aligned_cols=96 Identities=11% Similarity=0.011 Sum_probs=50.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.+++++.++.
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE--EFGPRVHALRSDIA-----DLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHGGGEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCcceEEEccCC-----CHHHHHHHHHHHHHHh
Confidence 3456667666555566666777889888776544333344444 34555665555422 45555544321
Q ss_pred -CceEEEEeCC-CCCccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINP-GNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p-~nptG~--~~~~~~~~~l~~~ 176 (387)
...++ +.+. ..+.+. -.+.+++++..++
T Consensus 81 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 81 GAIDLL-HINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SSEEEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 23333 4443 222221 2466777766653
No 267
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=47.28 E-value=98 Score=26.75 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=50.6
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCC--eEEEc--CCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGA--NILIP--RPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~--~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
...++++|.+.+.....+++...+.|. +|++. .|.+.+..........|+++..++- ..+-..+.
T Consensus 120 ~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~D----------sa~~~~m~- 188 (315)
T 3ecs_A 120 KDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLD----------AAVGYIME- 188 (315)
T ss_dssp CTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECG----------GGHHHHGG-
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEeh----------hHHHHHHH-
Confidence 345677776655555555555544453 55554 4555444332223367777766631 11222222
Q ss_pred CceEEEEeC-CCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 148 NTVAIVIIN-PGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 148 ~~~~v~l~~-p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
+...|++-. .--..|.+.+.----.++-.|+.+++++++=
T Consensus 189 ~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 333333221 1112222222222345677888999988653
No 268
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=47.05 E-value=67 Score=25.51 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=33.9
Q ss_pred EcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCC-hhhHHHhhccCceEEEEeC
Q 038416 78 LTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVD-LDGVEALADENTVAIVIIN 156 (387)
Q Consensus 78 ~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~l~~ 156 (387)
...+-.+++..+-.. +.|..|++...+ ....++ ...+.+++.+++. + .| +..|..+-+.+.+..++..
T Consensus 34 ~~~~l~~~v~~a~~~--~~~~dVIISRGg---ta~~lr-~~~~iPVV~I~~s---~--~Dil~al~~a~~~~~kIavvg~ 102 (196)
T 2q5c_A 34 KTASLTRASKIAFGL--QDEVDAIISRGA---TSDYIK-KSVSIPSISIKVT---R--FDTMRAVYNAKRFGNELALIAY 102 (196)
T ss_dssp EECCHHHHHHHHHHH--TTTCSEEEEEHH---HHHHHH-TTCSSCEEEECCC---H--HHHHHHHHHHGGGCSEEEEEEE
T ss_pred EECCHHHHHHHHHHh--cCCCeEEEECCh---HHHHHH-HhCCCCEEEEcCC---H--hHHHHHHHHHHhhCCcEEEEeC
Confidence 334445566655553 566556665422 223333 0356677776652 1 12 3334443333455555555
Q ss_pred CCC
Q 038416 157 PGN 159 (387)
Q Consensus 157 p~n 159 (387)
++-
T Consensus 103 ~~~ 105 (196)
T 2q5c_A 103 KHS 105 (196)
T ss_dssp SSC
T ss_pred cch
Confidence 553
No 269
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=46.90 E-value=36 Score=24.95 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=29.4
Q ss_pred CCh-hhHHHhhccCceEEEEeCCCCCcccc-CCHHHH---HHHHHHHHhcCcEE
Q 038416 136 VDL-DGVEALADENTVAIVIINPGNPCGNV-FSYQHL---QKIARTARNLGIIV 184 (387)
Q Consensus 136 ~~~-~~l~~~~~~~~~~v~l~~p~nptG~~-~~~~~~---~~l~~~~~~~~~~l 184 (387)
+++ +-+..++..+...+++.+-| |+|.. +|.+++ +++.+.|+-.|+.+
T Consensus 54 v~pRei~~~Al~~~A~~vIl~HNH-PSG~~~PS~~D~~~T~~l~~a~~ll~I~l 106 (126)
T 2qlc_A 54 IHPREIFKAAIRESAHSIILVHNH-PSGDVQPSNADKQVTSILKKAGDLLQIEL 106 (126)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEEC-SSSCCSCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred ecHHHHHHHHHHcCCcEEEEEecC-CCCCCCCCHHHHHHHHHHHHHHHHCCCeE
Confidence 344 44555777777777766533 66665 566664 56666677667644
No 270
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=46.89 E-value=30 Score=32.37 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=22.7
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEee
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|-.++.+++++|++.|+++||-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5688999999999999999998874
No 271
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=46.23 E-value=47 Score=26.92 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcc---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPL---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 159 (387)
|+++..+.++ ...|.+|++..|.-.. ....+. ..|..+..+++. +.+++.+.+.....+|++-..+.
T Consensus 43 T~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s--~~g~~~~a~~~~-------~~~~~~~~~~~~~dvViIDEaQF 112 (214)
T 2j9r_A 43 EELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVS--HNGLKVKAVPVS-------ASKDIFKHITEEMDVIAIDEVQF 112 (214)
T ss_dssp HHHHHHHHHH-HHTTCCEEEEECC-------------------CCEEECS-------SGGGGGGGCCSSCCEEEECCGGG
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHh--hcCCeeEEeecC-------CHHHHHHHHhcCCCEEEEECccc
Confidence 4555554444 5567788887665432 123334 556665544442 12344444443467888877776
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++.+.++.+.+++. .++.||+=.--.+| .+.++..
T Consensus 113 -----~~~~~V~~l~~l~~-~~~~Vi~~Gl~~DF--~~~~F~~ 147 (214)
T 2j9r_A 113 -----FDGDIVEVVQVLAN-RGYRVIVAGLDQDF--RGLPFGQ 147 (214)
T ss_dssp -----SCTTHHHHHHHHHH-TTCEEEEEECSBCT--TSCBCTT
T ss_pred -----CCHHHHHHHHHHhh-CCCEEEEEeccccc--ccCcccc
Confidence 66566765655555 48999886665553 3555444
No 272
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=46.18 E-value=62 Score=26.54 Aligned_cols=95 Identities=11% Similarity=-0.020 Sum_probs=47.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++....-........ ..+.+...+.++. -|.++++++++.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD--YLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--HHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 456666665554455666777889888775443333333333 2333334444432 255555554432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.+++++..+
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443332222222 246666766655
No 273
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=46.03 E-value=21 Score=30.58 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=35.6
Q ss_pred ChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 137 DLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 137 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-.+.++++++.+.+.+++... | ++.++.+++.+.|+++++.++-..+..
T Consensus 77 ~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~liGPNc~G 125 (288)
T 2nu8_A 77 CKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEAGVRMIGPNTPG 125 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 456677777777776655333 3 356778899999999999888777654
No 274
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=45.92 E-value=60 Score=26.41 Aligned_cols=95 Identities=8% Similarity=0.006 Sum_probs=46.9
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------C
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------N 148 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 148 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++. .
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL--LLGNAVIGIVADLA-----HHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHGGGEEEEECCTT-----SHHHHHHHHHHHHHHHCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HhcCCceEEECCCC-----CHHHHHHHHHHHHHhcCC
Confidence 45666655554455566677888888775443333333333 22334444444322 45555554432 3
Q ss_pred ceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 149 TVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 149 ~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
..+++.+....+.+. -.+.++++++.++
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 455554433322222 2466777766654
No 275
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=45.89 E-value=1.1e+02 Score=25.13 Aligned_cols=95 Identities=13% Similarity=-0.036 Sum_probs=46.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--ELGDAARYQHLDVT-----IEEDWQRVVAYAREEFG 78 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCceeEEEecCC-----CHHHHHHHHHHHHHHcC
Confidence 346666555544456666677888887765433222333334 34445555544322 45555554431
Q ss_pred CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+...++.+......+ .-.+.+++++..+
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344454333222222 1245566665554
No 276
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=45.83 E-value=1.2e+02 Score=24.68 Aligned_cols=95 Identities=17% Similarity=0.041 Sum_probs=47.6
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCC-cchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGY-PLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.- ......+. ..+.++..+..+.. |.++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR--NLGRRVLTVKCDVS-----QPGDVEAFGKQVISTF 80 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH--hcCCcEEEEEeecC-----CHHHHHHHHHHHHHHc
Confidence 3566666555545566666777888877653322 22222233 34555555554322 45555554431
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.++++++.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444543332222221 246666666555
No 277
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=45.67 E-value=63 Score=30.16 Aligned_cols=25 Identities=24% Similarity=0.386 Sum_probs=22.4
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEee
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|-.++.+++++|++.|+++||-||-
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5678999999999999999998874
No 278
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=45.14 E-value=76 Score=26.10 Aligned_cols=95 Identities=15% Similarity=-0.025 Sum_probs=49.1
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG--EIGDAALAVAADIS-----KEADVDAAVEAALSKFG 82 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCTTEEEEECCTT-----SHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--HhCCceEEEEecCC-----CHHHHHHHHHHHHHhcC
Confidence 456666665554456666677888888776544333444444 44545555554322 45555554431
Q ss_pred CceEEEEeCCCC-Ccc--ccCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGN-PCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~n-ptG--~~~~~~~~~~l~~ 175 (387)
....++.+.... +.+ ...+.+++++..+
T Consensus 83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 334454443321 122 1246666666554
No 279
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=43.67 E-value=1.3e+02 Score=24.59 Aligned_cols=95 Identities=9% Similarity=-0.059 Sum_probs=46.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....++..+..+. -|.++++++++.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA--GLENGGFAVEVDV-----TKRASVDAAMQKAIDALG 85 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 456666655554455666677888888765432222233333 2222334444322 245666655432
Q ss_pred CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+..+++.+......+ .-.+.+++++..+
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 345554433222222 1245566665554
No 280
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=43.12 E-value=23 Score=30.26 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=35.7
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
++.++++++.+.+.+++... | ++.++.+++.+.++++++.++-..+...
T Consensus 78 ~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~Gi 126 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPGI 126 (288)
T ss_dssp HHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCEE
T ss_pred HHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCeE
Confidence 45666677777886655432 3 4567789999999999999888887654
No 281
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=42.83 E-value=17 Score=31.17 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=35.4
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
++.++++++.+.+.+++.. +| ++.++.+++.+.|+++++.++-..+...
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~viGPNc~Gi 132 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVIT----EH--IPVHDTMEFVNYAEDVGVKIIGPNTPGI 132 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC----SC--CCHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHCCCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEcCCCcee
Confidence 4566667777788665433 23 3567789999999999998887776653
No 282
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=42.08 E-value=57 Score=27.33 Aligned_cols=96 Identities=16% Similarity=0.048 Sum_probs=48.1
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCc------------c---hHHHhhccCCCceeeeeccCCCCCccCCh
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP------------L---YEIHAAGSNNNLEARHYDLLPEKRWEVDL 138 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~------------~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-... . ...... ..+.++..+.++.. |.
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~-----~~ 83 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE--KTGRKAYTAEVDVR-----DR 83 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH--HTTSCEEEEECCTT-----CH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH--hcCCceEEEEccCC-----CH
Confidence 35666666555455666677788988876533211 0 111122 34555655555322 45
Q ss_pred hhHHHhhcc------CceEEEEeCCCCCccccCCHHHHHHHHHH
Q 038416 139 DGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 139 ~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~~~~l~~~ 176 (387)
++++++++. +..+++.+....+.+...+.+++.+..++
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 555554431 34444433333333333566667666653
No 283
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=41.92 E-value=47 Score=28.34 Aligned_cols=23 Identities=4% Similarity=0.145 Sum_probs=20.2
Q ss_pred CHHHHHHHHHHHHhcCcEEeecc
Q 038416 166 SYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
+.+.++++++.|.++|+.+|+|-
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999999984
No 284
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=41.61 E-value=1.4e+02 Score=24.41 Aligned_cols=96 Identities=17% Similarity=0.010 Sum_probs=46.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc-hHHHhh-ccCC-CceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL-YEIHAA-GSNN-NLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~-~~~~~~-~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
.+++|.++..-=..+...|.+.|.+|++..-.-.. ...... .... +.++..+..+. -|.++++++++.
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 45666555554456666677888888776543322 222222 0011 44555554432 245666555432
Q ss_pred --CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 --~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+ .-.+.+++++..+
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344554333222222 1245666666554
No 285
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=41.57 E-value=1.3e+02 Score=24.67 Aligned_cols=95 Identities=11% Similarity=-0.055 Sum_probs=46.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+. -|.++++++++.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA--ELGERSMFVRHDV-----SSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--HHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HcCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 346666655554455666677788888776543222233333 2244455554432 245555554432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
...+++.+....+.+. ..+.+++.+..+
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2344443332222221 245566666554
No 286
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=41.32 E-value=1e+02 Score=25.38 Aligned_cols=91 Identities=15% Similarity=0.099 Sum_probs=49.2
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--CceEE
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NTVAI 152 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v 152 (387)
.+++|.+++.-=..+.+.|.+.|-+|++.+-.-.. ... ..+.++..+..+. -|.+++++.++. +.. +
T Consensus 13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~---~~~--~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iD-i 81 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG---VHA--PRHPRIRREELDI-----TDSQRLQRLFEALPRLD-V 81 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS---TTS--CCCTTEEEEECCT-----TCHHHHHHHHHHCSCCS-E
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---Hhh--hhcCCeEEEEecC-----CCHHHHHHHHHhcCCCC-E
Confidence 45555555544455666678889888775432221 222 3344555555432 256666666654 223 3
Q ss_pred EEeCC-CCCccccCCHHHHHHHHHH
Q 038416 153 VIINP-GNPCGNVFSYQHLQKIART 176 (387)
Q Consensus 153 ~l~~p-~nptG~~~~~~~~~~l~~~ 176 (387)
+++|. .+.....++.++++++.++
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred EEECCCCCCCcccCCHHHHHHHHHH
Confidence 44554 2233345677777777764
No 287
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=40.32 E-value=1.4e+02 Score=24.51 Aligned_cols=95 Identities=15% Similarity=0.011 Sum_probs=45.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+. -|.++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA--ELADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhhcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 356666555544455666677788887764332222222222 2222344444332 255666655532
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+......+. -.+.+++++..+
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3445544333222221 245566655554
No 288
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.31 E-value=1.2e+02 Score=25.21 Aligned_cols=100 Identities=13% Similarity=-0.049 Sum_probs=50.4
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
+...+++|.++..-=..+.+.|.+.|.+|++....-........ ....+.++..+..+. -|.++++++++.
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDE 99 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 33456666665555556666777889888876543332222222 003455555555432 255665555432
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. -.+.+++++..++
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 3344443332222221 2466777666553
No 289
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=40.16 E-value=1.1e+02 Score=25.53 Aligned_cols=96 Identities=10% Similarity=-0.026 Sum_probs=52.3
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchH---HHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
..+++|.++..-=..+...|.+.|.+|++.+-.-.... ..++ ..|.++..+..+.. |.+++++.++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~--~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR--GMGKEVLGVKADVS-----KKKDVEEFVRRTFE 80 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH--hcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 34455555554445555667788988887544332222 2223 46777777766432 55665554432
Q ss_pred --CceEEEEeCCC--CCccc--cCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPG--NPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~--nptG~--~~~~~~~~~l~~~ 176 (387)
...=++++|.. .+.+- -++.++++++.++
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 22224455552 23332 3677888888775
No 290
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=39.97 E-value=98 Score=25.59 Aligned_cols=44 Identities=11% Similarity=-0.016 Sum_probs=25.4
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA 115 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~ 115 (387)
....+++|.++..-=..+.+.|.+.|.+|++..-.-........
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 69 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR 69 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 34467777666555556666777888777765433333333333
No 291
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=39.52 E-value=20 Score=30.93 Aligned_cols=50 Identities=12% Similarity=0.171 Sum_probs=36.9
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc-CcEEeeccccccc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL-GIIVIADEVYNHL 193 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~-~~~li~D~~~~~~ 193 (387)
.+.++++++.+.+.+++..+. ++.++.+++.+.|+++ |+.+|-+.+....
T Consensus 85 ~~~~~e~i~~Gi~~iv~~t~G------~~~~~~~~l~~~a~~~~gi~liGPnc~Gii 135 (305)
T 2fp4_A 85 AAAINEAIDAEVPLVVCITEG------IPQQDMVRVKHRLLRQGKTRLIGPNCPGVI 135 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCCC------CCHHHHHHHHHHHTTCSSCEEECSSSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCC------CChHHHHHHHHHHHhcCCcEEEeCCCCeEe
Confidence 455666777788887665553 2456678999999999 9999988887643
No 292
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=39.37 E-value=94 Score=25.94 Aligned_cols=95 Identities=16% Similarity=0.049 Sum_probs=47.9
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------C
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------N 148 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 148 (387)
.+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++. .
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA--EIGDDALCVPTDVT-----DPDSVRALFTATVEKFGR 102 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHTSCCEEEECCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HhCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 45555555444455666677889888776543333344444 34445555544322 45555554432 3
Q ss_pred ceEEEEeCCCC-Cccc--cCCHHHHHHHHHH
Q 038416 149 TVAIVIINPGN-PCGN--VFSYQHLQKIART 176 (387)
Q Consensus 149 ~~~v~l~~p~n-ptG~--~~~~~~~~~l~~~ 176 (387)
..+++.+.... +.+. -++.+++++..++
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 44444333222 2121 2566777666653
No 293
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=39.34 E-value=1.3e+02 Score=24.22 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=46.0
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccC-CCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSN-NNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ... .+.++..+..+. .|.++++++++.
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3456666655554455666677788887765432221221111 001 244455554432 256666665532
Q ss_pred ---CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+...++.+....+.+ ...+.+++++..+
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 445555443322222 1245555555544
No 294
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.47 E-value=1.4e+02 Score=24.53 Aligned_cols=31 Identities=19% Similarity=0.087 Sum_probs=20.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 4566666655544566666777888877654
No 295
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=38.34 E-value=1.3e+02 Score=24.99 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=48.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ . ...+.++..+..+.. |.++++++++.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 355666665554556666777889888775433322222221 0 023555555555322 45555554432
Q ss_pred --CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. -++.+++++..++
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 3444443332222221 2566777666653
No 296
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=38.04 E-value=1.7e+02 Score=24.27 Aligned_cols=100 Identities=14% Similarity=0.025 Sum_probs=50.2
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
....+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGMLDQMTG 105 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34456666665554556666777889888775443332222222 0034445555554322 55665555432
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. -.+.++++++.++
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444543332222221 3466777666553
No 297
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=38.04 E-value=1.6e+02 Score=24.23 Aligned_cols=99 Identities=16% Similarity=0.151 Sum_probs=55.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEE-E--cCC-----------CCcchHHHhhccCCCceeeeeccCCCCCccCChhh
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANIL-I--PRP-----------GYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl-~--~~p-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 140 (387)
-+++.|||.....++..+. +.|..|. + ..+ ........+. ..|++...+++.... ..-.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~--~LGIpl~~v~~~g~~--~~e~e~ 81 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQAR--ALGIPLVKGFTQGEK--EKEVED 81 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHH--HHTCCEEEEEC--------CHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHH--HcCCCEEEEECCCCc--hHHHHH
Confidence 3566788877776666554 4565443 1 111 1122345666 778888777764321 123566
Q ss_pred HHHhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 141 VEALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 141 l~~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
+.++++. +...++ +|.+.+......+-.+|.+.|+..+
T Consensus 82 l~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 82 LKRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 6666653 333444 6777777778888889999887644
No 298
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=37.96 E-value=1.8e+02 Score=24.46 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=20.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
...+++|.++..-=..+.+.|.+.|.+|++.+
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34566666655545566667778898887643
No 299
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=37.59 E-value=66 Score=26.24 Aligned_cols=76 Identities=11% Similarity=-0.005 Sum_probs=39.4
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--Cc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--NT 149 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~ 149 (387)
+...+++|.++..-=..+.+.|.+.|.+|++..-.-........ .....+..+..+. -+.+++.+.++. +.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN--ALKDNYTIEVCNL-----ANKEECSNLISKTSNL 85 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCSSEEEEECCT-----TSHHHHHHHHHTCSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--HhccCccEEEcCC-----CCHHHHHHHHHhcCCC
Confidence 34456666665554555666777889888776543333333333 2222333333321 256666666653 33
Q ss_pred eEEEE
Q 038416 150 VAIVI 154 (387)
Q Consensus 150 ~~v~l 154 (387)
.+++.
T Consensus 86 d~li~ 90 (249)
T 3f9i_A 86 DILVC 90 (249)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 44443
No 300
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=37.49 E-value=1.1e+02 Score=22.77 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=27.8
Q ss_pred hhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 139 DGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 139 ~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
+.++++++.+.+.+++. + |.. -+++.+.|+++|+.++-+.+..
T Consensus 92 ~vv~~~~~~gi~~i~~~-~----g~~-----~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 92 EYVEQAIKKGAKVVWFQ-Y----NTY-----NREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHTCSEEEEC-T----TCC-----CHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHcCCCEEEEC-C----Cch-----HHHHHHHHHHcCCEEEcCCchh
Confidence 34445555567777543 2 222 3677888889999988777654
No 301
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=37.43 E-value=1.2e+02 Score=25.40 Aligned_cols=31 Identities=19% Similarity=0.151 Sum_probs=20.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
...+++|.++..-=..+.+.|.+.|.+|++.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence 3456666665555556667777889888765
No 302
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=37.38 E-value=1.4e+02 Score=24.72 Aligned_cols=98 Identities=12% Similarity=0.057 Sum_probs=46.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ . ...+.++..+..+.. |.++++++++.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 356666655554556666677888887765433222222221 0 022445555554322 45665555432
Q ss_pred --CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. -.+.++++++.++
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 3444543332222221 2466666666553
No 303
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.17 E-value=22 Score=32.73 Aligned_cols=29 Identities=21% Similarity=0.492 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+.||+|-++....
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 34999999999999999999999888643
No 304
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=36.50 E-value=21 Score=23.98 Aligned_cols=22 Identities=27% Similarity=0.182 Sum_probs=18.7
Q ss_pred HHHHHHHHHhcCcEEeeccccc
Q 038416 170 LQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-.+|.++++++|++++.|..-+
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 6788899999999999996544
No 305
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=36.43 E-value=1.9e+02 Score=24.31 Aligned_cols=99 Identities=15% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCC-ceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNN-LEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+ .++..+..+.. |.++++++++.
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-----DPGSCADAARTVVD 115 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC-----CHHHHHHHHHHHHH
Confidence 3456666665554556666777889888776544333332222 00233 34555554322 55555554432
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
...+++.+....+.+. -++.+++++..++
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443332222222 3466777776654
No 306
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.42 E-value=1.3e+02 Score=24.03 Aligned_cols=97 Identities=14% Similarity=0.041 Sum_probs=48.7
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
.+++|.++...=..+.+.|.+.|.+|++............. . ...+.++..+..+. -|.++++++++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 45666665554455666677888887775443322222221 0 02344555555432 256666665542
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+...++.+....+.+. -.+.+++.+..+.
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 3445544433332222 2466667666553
No 307
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=35.94 E-value=1.3e+02 Score=24.27 Aligned_cols=95 Identities=15% Similarity=0.026 Sum_probs=47.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++....-..... ... ..+.++..+..+.. |.+++++.++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--EKGFKARGLVLNIS-----DIESIQNFFAEIKA 78 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 356666665554455666677888888765443322222 222 34556665555322 45555554432
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
....++.+....+.+. -.+.+++++..+
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2344544433222222 346666666555
No 308
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.61 E-value=1.8e+02 Score=23.60 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=45.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ..+. ..+..+. -|.++++++++.
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~--~~~~~D~-----~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE--AVGA--HPVVMDV-----ADPASVERGFAEALAHLG 76 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TTTC--EEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HcCC--EEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 346666655544455666677788888765433222333334 3443 3333322 245665554432
Q ss_pred CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 ~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
+..+++.+....+.+ .-.+.+++++..++
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344454333222222 12456666666553
No 309
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=35.52 E-value=1.3e+02 Score=25.47 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC--CeEEEc--CCCCcchHHHhhccCCCceeeeeccC
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG--ANILIP--RPGYPLYEIHAAGSNNNLEARHYDLL 129 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--~~vl~~--~p~~~~~~~~~~~~~~g~~~~~~~~~ 129 (387)
+..+.|+++.... +...+.++|.+.+.....+++.+.+.| -+|++. .|.+.+..........|+++..+.-
T Consensus 94 ~~~~~Ia~~a~~~----I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~d- 168 (276)
T 1vb5_A 94 EAKRELASIGAQL----IDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITD- 168 (276)
T ss_dssp HHHHHHHHHHHHH----CCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG-
T ss_pred HHHHHHHHHHHHH----ccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcH-
Confidence 3344555544432 234456665443333333444444333 366663 4666552222222246777776641
Q ss_pred CCCCccCChhhHHHhhccCceEEEEeC-CCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 130 PEKRWEVDLDGVEALADENTVAIVIIN-PGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 130 ~~~~~~~~~~~l~~~~~~~~~~v~l~~-p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
...-..+. +...+++.. .-...|-+.+.-.--.++..|+.+++++++
T Consensus 169 ---------sa~~~~m~-~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 169 ---------AQMGLFCR-EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp ---------GGHHHHHT-TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred ---------HHHHHHHc-cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 11111232 344444332 112233333323345677778889887766
No 310
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=35.49 E-value=1e+02 Score=24.32 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcc-h--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPL-Y--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 159 (387)
|+++...++.+...|.+|++..|.-.. + ..... ..|......+.. +.+++.+.+..+..+|++-..++
T Consensus 22 TT~ll~~a~r~~~~g~kV~v~k~~~d~r~~~~~i~s--~~g~~~~a~~~~-------~~~~i~~~~~~~~dvViIDEaqf 92 (191)
T 1xx6_A 22 SEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVS--HMGEKEQAVAIK-------NSREILKYFEEDTEVIAIDEVQF 92 (191)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC-------CEEEC--TTSCEEECEEES-------SSTHHHHHCCTTCSEEEECSGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccCccchHHHHHh--hcCCceeeEeeC-------CHHHHHHHHhccCCEEEEECCCC
Confidence 444444444445667778777554432 1 11222 455444333331 12355555544467777766554
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCcc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVP 202 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 202 (387)
++++.+..+.+++.. ++.||+=.--.+ |.+.++..
T Consensus 93 -----l~~~~v~~l~~l~~~-~~~Vi~~Gl~~d--f~~~~F~~ 127 (191)
T 1xx6_A 93 -----FDDEIVEIVNKIAES-GRRVICAGLDMD--FRGKPFGP 127 (191)
T ss_dssp -----SCTHHHHHHHHHHHT-TCEEEEEECSBC--TTSCBCTT
T ss_pred -----CCHHHHHHHHHHHhC-CCEEEEEecccc--cccCcCcc
Confidence 555667777666665 888887443333 33444433
No 311
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=35.32 E-value=31 Score=31.60 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=24.5
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.+.|..++.+++++|++.|+++||-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 3557789999999999999999998874
No 312
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=35.12 E-value=41 Score=30.88 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=40.1
Q ss_pred CCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 132 KRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
.+|.+|..++.++..-+..+|++... .++.++++++.+.|++.|+.+++|
T Consensus 114 KDFI~d~~Qi~ea~~~GAD~ILLi~a------~l~~~~l~~l~~~a~~lgm~~LvE 163 (452)
T 1pii_A 114 KDFIIDPYQIYLARYYQADACLLMLS------VLDDDQYRQLAAVAHSLEMGVLTE 163 (452)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEEETT------TCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EeccCCHHHHHHHHHcCCCEEEEEcc------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34778888888866667888877654 356688999999999999999887
No 313
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.00 E-value=1.4e+02 Score=24.55 Aligned_cols=66 Identities=23% Similarity=0.135 Sum_probs=34.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD 146 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 146 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++..+..+.. |.++++++++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~-----~~~~v~~~~~ 72 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--ALEAEAIAVVADVS-----DPKAVEAVFA 72 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TCCSSEEEEECCTT-----SHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhcCceEEEEcCCC-----CHHHHHHHHH
Confidence 356666655554455666677788887765433222333444 34334454544322 4555555443
No 314
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=34.91 E-value=83 Score=25.59 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=52.5
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCcch--HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----CceEEEEe
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYPLY--EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-----NTVAIVII 155 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~ 155 (387)
|+++...+..+...|.+|++..|....- ...+. ..|.....+++ .+.+++.+.+.. ...+|++-
T Consensus 26 TT~ll~~~~r~~~~g~kVli~~~~~d~r~~~~i~s--rlG~~~~~~~~-------~~~~~i~~~i~~~~~~~~~dvViID 96 (223)
T 2b8t_A 26 TAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQS--RTGTSLPSVEV-------ESAPEILNYIMSNSFNDETKVIGID 96 (223)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCC--CCCCSSCCEEE-------SSTHHHHHHHHSTTSCTTCCEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEEEEeccCchHHHHHHH--hcCCCcccccc-------CCHHHHHHHHHHHhhCCCCCEEEEe
Confidence 5555555555556777888776655321 12233 45544333332 123444443332 36677777
Q ss_pred CCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 156 NPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 156 ~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
..+. ++.+.++.+..+++. ++.+|+=.--.+
T Consensus 97 EaQ~-----l~~~~ve~l~~L~~~-gi~Vil~Gl~~d 127 (223)
T 2b8t_A 97 EVQF-----FDDRICEVANILAEN-GFVVIISGLDKN 127 (223)
T ss_dssp SGGG-----SCTHHHHHHHHHHHT-TCEEEEECCSBC
T ss_pred cCcc-----CcHHHHHHHHHHHhC-CCeEEEEecccc
Confidence 7664 555666777666664 888887655444
No 315
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=34.69 E-value=39 Score=28.06 Aligned_cols=52 Identities=17% Similarity=0.225 Sum_probs=34.6
Q ss_pred hhhHHHhhccCceEEEEeCCCCC----ccccCCHHH----HHHHHHHHHhcCcEEeecccc
Q 038416 138 LDGVEALADENTVAIVIINPGNP----CGNVFSYQH----LQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~np----tG~~~~~~~----~~~l~~~~~~~~~~li~D~~~ 190 (387)
.+.++++++.....|.+=..+.+ +| .++..+ .+++.++|+++++.+|+++-.
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHCCCCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 46667777777778877776632 11 123333 367888999999999886544
No 316
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=34.58 E-value=88 Score=31.32 Aligned_cols=27 Identities=33% Similarity=0.338 Sum_probs=23.5
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.|-.++.+++++|++.|+++||-||-
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 346689999999999999999998873
No 317
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=34.37 E-value=1.5e+02 Score=24.02 Aligned_cols=97 Identities=15% Similarity=0.040 Sum_probs=46.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 356666665555556666677788877765332222222111 0023445555554322 45665554432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.++++++.+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3444543332222222 245666665554
No 318
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=34.33 E-value=62 Score=32.27 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=50.5
Q ss_pred CCCCcchHHHhhccCC-CceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 104 RPGYPLYEIHAAGSNN-NLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
.|+|.+..+... .. +..+..+-+++. .-++.++++++ .+.+.+++.... ++..+.+++.++|+++|
T Consensus 550 vp~y~sv~ea~~--~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~G------f~e~~~~~l~~~A~~~g 617 (829)
T 3pff_A 550 IPVFKNMADAMR--KHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEG------IPEALTRKLIKKADQKG 617 (829)
T ss_dssp EEEESSHHHHHH--HCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSC------CCHHHHHHHHHHHHHHT
T ss_pred cccCCcHHHHhh--ccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCC------CCHHHHHHHHHHHHHcC
Confidence 466766666655 32 344443333222 34678888888 788887766544 33456789999999999
Q ss_pred cEEeecccccc
Q 038416 182 IIVIADEVYNH 192 (387)
Q Consensus 182 ~~li~D~~~~~ 192 (387)
+.+|==.+.+.
T Consensus 618 ~rliGPNc~Gi 628 (829)
T 3pff_A 618 VTIIGPATVGG 628 (829)
T ss_dssp CEEECSSCCCE
T ss_pred CEEEcCCCccc
Confidence 98886666654
No 319
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=34.03 E-value=1.4e+02 Score=25.95 Aligned_cols=55 Identities=25% Similarity=0.251 Sum_probs=37.6
Q ss_pred CChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 136 VDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 136 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
-+.-++.+...-|..-+-+ -.+|.|-....+.+.++++.|+++|+.|++|--|++
T Consensus 30 ~d~~~ilk~~G~N~VRi~~--w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd 84 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRV--WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSD 84 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEE--CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred ccHHHHHHHCCCCEEEEee--eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 3444544433334433322 356777777889999999999999999999966554
No 320
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=33.91 E-value=1.5e+02 Score=24.55 Aligned_cols=97 Identities=18% Similarity=0.037 Sum_probs=47.1
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
.+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+.++.. |.++++++++.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHcC
Confidence 45556555444455666677888888775433222222221 0034556666555322 45555554431
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
...+++.+....+.+. -.+.+++++..++
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443332222222 2466777666553
No 321
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=33.90 E-value=1.5e+02 Score=25.01 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=48.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+.++.. |.++++++++.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHhC
Confidence 456666665554555666677888888775443332222222 0034556665555422 55565554432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
...+++.+......+. -.+.+++.+..+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3444443333222222 356666666655
No 322
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=33.90 E-value=1.3e+02 Score=24.73 Aligned_cols=96 Identities=13% Similarity=0.025 Sum_probs=48.7
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-..... .+. ..+.++..+..+.. |.+++++.++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--QAGGKAIGLECNVT-----DEQHREAVIKAAL 84 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 3455666655554456666677888888775433322222 222 34556666655422 45555554432
Q ss_pred ----CceEEEEeCCCC-CccccCCHHHHHHHHH
Q 038416 148 ----NTVAIVIINPGN-PCGNVFSYQHLQKIAR 175 (387)
Q Consensus 148 ----~~~~v~l~~p~n-ptG~~~~~~~~~~l~~ 175 (387)
+..+++.+.... +...-.+.+++++..+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 344444333222 2222456677766655
No 323
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=33.85 E-value=1.4e+02 Score=24.44 Aligned_cols=96 Identities=15% Similarity=-0.018 Sum_probs=44.9
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS-----DRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHHhC
Confidence 35566555444455666677788887765332221111111 0023445555554322 45666555432
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+...++.+....+.+. -.+.++++++.+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444543332222222 245566665554
No 324
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.53 E-value=1.4e+02 Score=24.89 Aligned_cols=95 Identities=13% Similarity=-0.061 Sum_probs=48.1
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-..... .+. ..+.++..+..+.. |.++++++++.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--AAGHDVDGSSCDVT-----STDEVHAAVAAAVER 98 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--TTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 45666655554455666777889888765433222222 223 34556666655322 55655554432
Q ss_pred --CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
...+++.+....+.+ .-.+.++++++.++
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 334444333222222 22566667666553
No 325
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=33.39 E-value=1.7e+02 Score=23.99 Aligned_cols=97 Identities=11% Similarity=-0.051 Sum_probs=48.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..++..|.+.|.+|++............. ....+.++..+.++.. |.+++.++++.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAAH 104 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 356666655544455566677888888776443332222211 0034556665555322 45555554432
Q ss_pred -CceEEEEeCCC-CCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPG-NPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~-nptG~--~~~~~~~~~l~~ 175 (387)
....++.+... .+.+. ..+.+++++..+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 34555544332 22222 256666666554
No 326
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=33.27 E-value=1.2e+02 Score=25.20 Aligned_cols=98 Identities=14% Similarity=-0.071 Sum_probs=49.0
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCC-cc---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGY-PL---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~-~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
....+++|.++..-=..+.+.|.+.|.+|++..-.- .. ...... ..+.++..+..+.. |.++++++++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~-----d~~~v~~~~~~ 99 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA--AAGGEAFAVKADVS-----QESEVEALFAA 99 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTT-----SHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH--hcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 334566666655545556667778898877643211 11 112223 34556666655422 45555554432
Q ss_pred ------CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 ------NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 ------~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
...+++.+....+.+ ...+.+++++..++
T Consensus 100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 334444333222222 13466777766653
No 327
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=33.27 E-value=1.5e+02 Score=25.31 Aligned_cols=31 Identities=16% Similarity=0.091 Sum_probs=20.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+...|.+.|.+|++..
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3456666555444556666778898887754
No 328
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=33.06 E-value=1.3e+02 Score=24.38 Aligned_cols=67 Identities=12% Similarity=-0.109 Sum_probs=32.6
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhc
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALAD 146 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 146 (387)
.+++|.++...=..+...|.+.|.+|++..-.-........ . ...+.++..+..+. -|.++++++++
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 72 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIA 72 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 35566555444455566677778777765433222222221 0 02344455555432 25566665553
No 329
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=32.77 E-value=79 Score=26.67 Aligned_cols=49 Identities=10% Similarity=0.210 Sum_probs=38.4
Q ss_pred CccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 133 RWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 133 ~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
++.+|..++..+..-+...|++..+ .++.++++++.+.|+++|+.++++
T Consensus 120 dfiid~~qv~~A~~~GAD~VlLi~a------~l~~~~l~~l~~~a~~lGl~~lve 168 (272)
T 3qja_A 120 DFVVQPYQIHEARAHGADMLLLIVA------ALEQSVLVSMLDRTESLGMTALVE 168 (272)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHCCCcEEEE
Confidence 4678888888887778888877543 245688999999999999987765
No 330
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=32.38 E-value=1e+02 Score=25.23 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=20.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPG 106 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~ 106 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 345666555544456666677788888775443
No 331
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.38 E-value=1.6e+02 Score=23.86 Aligned_cols=96 Identities=11% Similarity=-0.053 Sum_probs=45.7
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCcee-eeeccCCCCCccCChhhHHHhhcc----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEA-RHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
...+++|.++..-=..+...|.+.|.+|++..-.-........ ..+.++ ..+..+. -|.++++++++.
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ--ELGAAVAARIVADV-----TDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHGGGEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhcccceeEEEEec-----CCHHHHHHHHHHHHhh
Confidence 3456666655544456666677788887765433222222223 223333 4444322 255666655432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+...++.+......+. ..+.+++++..+
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 3455544433222221 235555555443
No 332
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=32.00 E-value=1.8e+02 Score=23.47 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=19.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3566665555444556666777887777654
No 333
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=31.92 E-value=1.7e+02 Score=24.24 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=20.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+...|.+.|.+|++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 4566666655544566667778898887653
No 334
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=31.63 E-value=1.4e+02 Score=24.85 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=20.3
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
...+++|.++..-=..+.+.|.+.|.+|++.
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 3456666665554456666777889888765
No 335
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=31.58 E-value=31 Score=31.50 Aligned_cols=27 Identities=26% Similarity=0.464 Sum_probs=23.9
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|.|-.++.+++++|++.|+++||-||-
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999999999998874
No 336
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=31.56 E-value=1.9e+02 Score=23.50 Aligned_cols=77 Identities=12% Similarity=0.080 Sum_probs=39.2
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++....-..... .++ ..+.++..+..+. -|.++++++++.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR--MEGHDVSSVVMDV-----TNTESVQNAVRSVH 85 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 3456666655544455666677788887765433222111 122 2344555555432 255666655532
Q ss_pred ----CceEEEEeC
Q 038416 148 ----NTVAIVIIN 156 (387)
Q Consensus 148 ----~~~~v~l~~ 156 (387)
+...++.+.
T Consensus 86 ~~~~~id~vi~~A 98 (260)
T 3awd_A 86 EQEGRVDILVACA 98 (260)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 345555443
No 337
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.51 E-value=1.5e+02 Score=24.55 Aligned_cols=32 Identities=19% Similarity=0.110 Sum_probs=20.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
...+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 34566666655545566667778898887653
No 338
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=31.32 E-value=2.1e+02 Score=23.37 Aligned_cols=97 Identities=9% Similarity=-0.091 Sum_probs=46.6
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD------ 146 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------ 146 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS-----SRSERQELMNTVANHF 84 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 456667665554456666677788887765332221221111 0023555555554322 5566555543
Q ss_pred -cCceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 147 -ENTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 147 -~~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
.+..+++.+....+.+ .-.+.+++++..+
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2344444333222222 1245666666554
No 339
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.23 E-value=1.7e+02 Score=24.23 Aligned_cols=97 Identities=13% Similarity=0.010 Sum_probs=45.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR-----SVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHHh
Confidence 346666555544455666677788877765332222221111 0023545555554322 45655554432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+......+. -.+.+++.+..+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3445543332222221 245566666554
No 340
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=31.09 E-value=2.3e+02 Score=23.48 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=20.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 4566666555544566677778898887654
No 341
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=30.98 E-value=2.1e+02 Score=23.06 Aligned_cols=98 Identities=11% Similarity=-0.063 Sum_probs=46.0
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
...+++|.++...=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+. -|.++++++++.
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 3456666655544455666677888877765432221111111 002344555554432 255666665531
Q ss_pred --CceEEEEeCCCCCcc-ccCCHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCG-NVFSYQHLQKIAR 175 (387)
Q Consensus 148 --~~~~v~l~~p~nptG-~~~~~~~~~~l~~ 175 (387)
....++.+......+ .-.+.+++++..+
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 445555443322111 1245555554443
No 342
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=30.96 E-value=53 Score=31.19 Aligned_cols=25 Identities=16% Similarity=0.384 Sum_probs=22.2
Q ss_pred cccCCHHHHHHHHHHHHhcCcEEee
Q 038416 162 GNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 162 G~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|..++.+++++|++.|+++||-||-
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCceee
Confidence 4578999999999999999998873
No 343
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=30.88 E-value=3.5 Score=27.97 Aligned_cols=82 Identities=24% Similarity=0.279 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHH----hh---cCCCCeE
Q 038416 28 TVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLS----VL---ARPGANI 100 (387)
Q Consensus 28 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~----~l---~~~g~~v 100 (387)
|.+++...+.+..-+.+...+....++-.+-|-+|+++ .|.+..+++|+ +.|..++.+.-+. .. ...|.++
T Consensus 10 pavIdKALDFI~~M~tSas~P~sMdESTAKGifKyL~e-lGvPas~~dv~-aRg~qegWn~gFT~k~~gWAek~esGer~ 87 (115)
T 2es9_A 10 PTAIEKALDFIGGMNTSASVPHSMDESTAKGILKYLHD-LGVPVSPEVVV-ARGEQEGWNPEFTKKVAGWAEKVASGNRI 87 (115)
T ss_dssp -CHHHHHHHHHHTSCTTCSSCCHHHHHHHHHHHHHHHH-TTCCCCHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcccccCCCCCCccchHHHHHHHHHHHH-cCCCCCHHHHH-HhcccccCChhHHHHHHHHHHHhccCCee
Confidence 34555555666654443444444566777788888875 55555554443 3333333322221 11 2578999
Q ss_pred EEcCCCCcchH
Q 038416 101 LIPRPGYPLYE 111 (387)
Q Consensus 101 l~~~p~~~~~~ 111 (387)
++-+|.|++..
T Consensus 88 vIKnPEyFstY 98 (115)
T 2es9_A 88 LIKNPEYFSTY 98 (115)
T ss_dssp CCSSGGGSCHH
T ss_pred eecChHHHHHH
Confidence 99999998753
No 344
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.82 E-value=2.6e+02 Score=24.06 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEc---CChHHHHHHHHHhhcCCCCeEEEcCCCCc
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLT---LGCSQAIEISLSVLARPGANILIPRPGYP 108 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~~l~~~g~~vl~~~p~~~ 108 (387)
.+=|+.+.+...+..+ +.-.|+.. +++.+++..+-++-.-.-|.+++..|.|+
T Consensus 63 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 63 REERAQLIATARKAVG---PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHHHHHHHHHHHHC---TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 3445555555543211 12245543 34556666555443222388888888775
No 345
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=30.79 E-value=2.1e+02 Score=23.82 Aligned_cols=98 Identities=14% Similarity=0.031 Sum_probs=48.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCc-chHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYP-LYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~-~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-. ....... . ...+.++..+..+. -|.++++++++.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMVAD 100 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 45666766555555666677788988887654221 1111111 0 02244555555432 255665554432
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
...+++.+......+. -.+.++++++.++
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443333222222 2466777666553
No 346
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=30.73 E-value=2.3e+02 Score=23.47 Aligned_cols=99 Identities=10% Similarity=-0.063 Sum_probs=47.6
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc----
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD---- 146 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---- 146 (387)
....+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIERAEA 106 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 34456666666555566666777889888765433222222221 0034555665555432 3333333322
Q ss_pred -cCceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 147 -ENTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 147 -~~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
....+++.+......+. -.+.+++++..+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 13344443332222222 246677766655
No 347
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=30.65 E-value=1.5e+02 Score=25.77 Aligned_cols=101 Identities=12% Similarity=0.164 Sum_probs=48.9
Q ss_pred HHHHHHHHHhhcC-CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhH-HHh------hcc-CceEEE
Q 038416 83 SQAIEISLSVLAR-PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGV-EAL------ADE-NTVAIV 153 (387)
Q Consensus 83 ~~a~~~~~~~l~~-~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l-~~~------~~~-~~~~v~ 153 (387)
+-++..+..+..+ +|..+++.+..+..-...++ ..|.....+-+.... +.+++ .+. ++. ..++|+
T Consensus 43 tL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~--~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvV 116 (333)
T 3io5_A 43 NFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLR--SMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVF 116 (333)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHH--HTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEeccchhhHHHHH--HhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEE
Confidence 3334444443332 36777776665544344566 677664433222111 33443 221 333 456666
Q ss_pred EeCCCCCc------ccc-------CCH-----HHHHHHHHHHHhcCcEEe-eccc
Q 038416 154 IINPGNPC------GNV-------FSY-----QHLQKIARTARNLGIIVI-ADEV 189 (387)
Q Consensus 154 l~~p~npt------G~~-------~~~-----~~~~~l~~~~~~~~~~li-~D~~ 189 (387)
+-+.+.-. |.. +.. ..+.+|..+++++|+.+| +..+
T Consensus 117 IDSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV 171 (333)
T 3io5_A 117 IDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHT 171 (333)
T ss_dssp EECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCe
Confidence 66654321 110 011 235566677889998654 4444
No 348
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=30.52 E-value=33 Score=31.41 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 5999999999999999999999987644
No 349
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=30.33 E-value=1.5e+02 Score=24.19 Aligned_cols=94 Identities=15% Similarity=-0.010 Sum_probs=44.5
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc--hHHH---hhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL--YEIH---AAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~--~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-.. .... +. ..+.++..+..+.. |.++++++++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 76 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE--AADQKAVFVGLDVT-----DKANFDSAIDEAA 76 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHH--TTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHH--hcCCcEEEEEccCC-----CHHHHHHHHHHHH
Confidence 35566555444455566677778777765332221 1111 22 23555555554322 45555554432
Q ss_pred ----CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 ----NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ----~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.++++++.+
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443332222221 245666665554
No 350
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=30.32 E-value=1.2e+02 Score=20.01 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=30.1
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
..+..++++.+ .++|++.+- .+++-.+.+-.+|++++++++.-..-..
T Consensus 16 ~~~v~kai~~gkaklViiA~D-------~~~~~~~~i~~lc~~~~Ip~~~v~sk~e 64 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKD-------ADPILTSSVVSLAEDQGISVSMVESMKK 64 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETT-------SCHHHHHHHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHHHHHHcCCeeEEEEeCC-------CCHHHHHHHHHHHHHcCCCEEEECCHHH
Confidence 35666677654 445554432 2334578889999999998876544333
No 351
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=30.27 E-value=30 Score=23.78 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=18.7
Q ss_pred HHHHHHHHHhcCcEEeeccccc
Q 038416 170 LQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-.+|.++|+++|++++.|..-+
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEECHHHH
Confidence 5788899999999999996554
No 352
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=30.17 E-value=58 Score=24.16 Aligned_cols=42 Identities=14% Similarity=0.171 Sum_probs=27.2
Q ss_pred hHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 140 GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 140 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
.++++.+...+.+|+. +. .. -+++.++|+++|+.++-+.+..
T Consensus 86 v~~~~~~~gi~~i~~~-~g----~~-----~~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 86 HLPEVLALRPGLVWLQ-SG----IR-----HPEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp THHHHHHHCCSCEEEC-TT----CC-----CHHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHcCCCEEEEc-CC----cC-----HHHHHHHHHHcCCEEEcCCccc
Confidence 3444555566666543 22 11 2778888889999999887765
No 353
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=30.16 E-value=1.9e+02 Score=23.73 Aligned_cols=98 Identities=9% Similarity=-0.054 Sum_probs=46.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ . ...+.++..+..+.. |.++++++++.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 455666655554456666677888888775443322222221 0 013555555555432 33444433321
Q ss_pred --CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
+..+++.+......+ .-.+.+++++..++
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 345555443322222 23566666665553
No 354
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=30.07 E-value=1.7e+02 Score=24.29 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=47.1
Q ss_pred EEEcCCh-HHHHHHHHHhhcCC-CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEE
Q 038416 76 VYLTLGC-SQAIEISLSVLARP-GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 76 i~~~~g~-~~a~~~~~~~l~~~-g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
|++|.++ .-+-.++- .|.+. |.+|.+..-.-.... ... ..+.+++..++ .|.+.+.++++ +...|+
T Consensus 3 ilVtGatG~iG~~l~~-~L~~~~g~~V~~~~R~~~~~~-~~~--~~~v~~~~~D~-------~d~~~l~~~~~-~~d~vi 70 (289)
T 3e48_A 3 IMLTGATGHLGTHITN-QAIANHIDHFHIGVRNVEKVP-DDW--RGKVSVRQLDY-------FNQESMVEAFK-GMDTVV 70 (289)
T ss_dssp EEEETTTSHHHHHHHH-HHHHTTCTTEEEEESSGGGSC-GGG--BTTBEEEECCT-------TCHHHHHHHTT-TCSEEE
T ss_pred EEEEcCCchHHHHHHH-HHhhCCCCcEEEEECCHHHHH-Hhh--hCCCEEEEcCC-------CCHHHHHHHHh-CCCEEE
Confidence 5666543 33444433 45554 766554322111111 112 34555444332 26788888876 556666
Q ss_pred EeCCC-CCccccCCHHHHHHHHHHHHhcCc
Q 038416 154 IINPG-NPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 154 l~~p~-nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
.+.+. ++.. ......+.+++.|++.++
T Consensus 71 ~~a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 71 FIPSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp ECCCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred EeCCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 55432 2211 122446788888988875
No 355
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=29.94 E-value=2.4e+02 Score=23.41 Aligned_cols=95 Identities=8% Similarity=-0.022 Sum_probs=46.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
..+++|.++..-=..++..|.+.|.+|++..-.-..... .+. ..+.++..+..+.. |.++++++++.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--SFGYESSGYAGDVS-----KKEEISEVINKILT 117 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHH--TTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH--hcCCceeEEECCCC-----CHHHHHHHHHHHHH
Confidence 346666555544455666677888887764322111111 122 33555555554322 55666655431
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
...+++.+....+.+. ..+.+++++..+
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3445544333222221 245556655544
No 356
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=29.65 E-value=2.5e+02 Score=23.59 Aligned_cols=145 Identities=15% Similarity=0.146 Sum_probs=66.7
Q ss_pred CCCcHHHHHHHHHHhcCCCC-------CCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCC
Q 038416 24 LSDSTVAEDAVVDALRTAHY-------NCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARP 96 (387)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~-------~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 96 (387)
+|.-+.+.+.+.+.+....+ ..|...++.......+++-+.. ..-+++++.++..+. .+.... +
T Consensus 19 hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~------~~~DlIiai~t~aa~-a~~~~~-~- 89 (302)
T 3lkv_A 19 HPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG------ENPDVLVGIATPTAQ-ALVSAT-K- 89 (302)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT------TCCSEEEEESHHHHH-HHHHHC-S-
T ss_pred ChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh------cCCcEEEEcCCHHHH-HHHhhc-C-
Confidence 34456667777777664211 0122345555555555555532 334677777655443 333332 1
Q ss_pred CCeEEE---cCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHH---hhccCc-eEEEEeCCCCCccccCCHHH
Q 038416 97 GANILI---PRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA---LADENT-VAIVIINPGNPCGNVFSYQH 169 (387)
Q Consensus 97 g~~vl~---~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-~~v~l~~p~nptG~~~~~~~ 169 (387)
.--|++ .+|.-........ ..|..+..+.- ..+.+.-.+ .+-++. ++.++.+++.+.. ...
T Consensus 90 ~iPVVf~~v~dp~~~~l~~~~~--~~g~nvtGv~~------~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s----~~~ 157 (302)
T 3lkv_A 90 TIPIVFTAVTDPVGAKLVKQLE--QPGKNVTGLSD------LSPVEQHVELIKEILPNVKSIGVVYNPGEANA----VSL 157 (302)
T ss_dssp SSCEEEEEESCTTTTTSCSCSS--SCCSSEEEEEC------CCCHHHHHHHHHHHSTTCCEEEEEECTTCHHH----HHH
T ss_pred CCCeEEEecCCcchhhhccccc--CCCCcEEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEeCCCcccH----HHH
Confidence 112332 2333322222222 33334433321 123332222 233443 4446666654322 234
Q ss_pred HHHHHHHHHhcCcEEeeccc
Q 038416 170 LQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~ 189 (387)
.+.+.+.+.++|+-++.-..
T Consensus 158 ~~~~~~~~~~~g~~~v~~~~ 177 (302)
T 3lkv_A 158 MELLKLSAAKHGIKLVEATA 177 (302)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEEec
Confidence 66677778899987765443
No 357
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=29.60 E-value=3.1e+02 Score=24.61 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=27.7
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcC-CCCeEEEc
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLAR-PGANILIP 103 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~g~~vl~~ 103 (387)
.|..+.-+...+|.+....+......+++|.+++.-=..+...|.+ .|.+|++.
T Consensus 24 ~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 24 TGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEE
Confidence 4555544444456665433322333445554444333445555667 78777653
No 358
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=29.58 E-value=1.7e+02 Score=25.32 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=38.0
Q ss_pred CChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecccccc
Q 038416 136 VDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNH 192 (387)
Q Consensus 136 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~ 192 (387)
-+.-++.+.+.-|..-+-+ -.+|.+-..+.+.+.++++.|+++|+.+++|--|++
T Consensus 30 ~~~~~ilk~~G~n~vRlri--~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd 84 (334)
T 1fob_A 30 QALETILADAGINSIRQRV--WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSD 84 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred chHHHHHHHcCCCEEEEEE--EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 3444555444434433322 255667778889999999999999999999976654
No 359
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=29.55 E-value=2.4e+02 Score=24.11 Aligned_cols=103 Identities=12% Similarity=-0.013 Sum_probs=51.1
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccC-------CCceeeeeccCCCCCccCChhhHHH
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSN-------NNLEARHYDLLPEKRWEVDLDGVEA 143 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~-------~g~~~~~~~~~~~~~~~~~~~~l~~ 143 (387)
....|++|.++.-.=..++..|++.|.+|++..-.-........ ... .+.+++..++ .|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 44577777665444455556666778777654322211111111 001 2333333322 36788888
Q ss_pred hhccCceEEEEeCCCCCccc-cCCHH--------HHHHHHHHHHhcCc
Q 038416 144 LADENTVAIVIINPGNPCGN-VFSYQ--------HLQKIARTARNLGI 182 (387)
Q Consensus 144 ~~~~~~~~v~l~~p~nptG~-~~~~~--------~~~~l~~~~~~~~~ 182 (387)
+++ +..+|+.+........ .-... -...+++.|++.++
T Consensus 97 ~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMK-GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTT-TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred Hhc-CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 776 5666665554211111 11111 13457888888875
No 360
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=29.49 E-value=1.3e+02 Score=24.98 Aligned_cols=96 Identities=10% Similarity=-0.023 Sum_probs=48.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCC-CCcc---hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRP-GYPL---YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p-~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..- .-.. ....+. ..+.++..+..+.. |.++++++++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 91 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--ALGSDAIAIKADIR-----QVPEIVKLFDQAV 91 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--hcCCcEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 34566655554445566677788988876322 1111 122223 34656666655432 55665555432
Q ss_pred ----CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ----NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ----~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+....+.+. -.+.+++++..++
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443222222222 2466777766653
No 361
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=29.48 E-value=1.3e+02 Score=21.23 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=30.3
Q ss_pred CeEEEcCCccCCCCeEEEEe-eCChHhHHHHHHHHHHHHHHhhh
Q 038416 343 SVIILPGRTVGMKNWLRIAF-AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 343 gi~v~~g~~~~~~~~~Ri~~-~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
-++++|.+ -.+.+|+-+ +.+.+.++++++.+.+.+++..+
T Consensus 58 wvlvRpSG---TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~~ 98 (112)
T 1wjw_A 58 RAFVRPSG---TEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 98 (112)
T ss_dssp EEEEECSS---SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCC---CccEEEEEEEECCHHHHHHHHHHHHHHHHHHHh
Confidence 36677753 267899999 66788899999999888877643
No 362
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=29.36 E-value=2.2e+02 Score=23.35 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=44.1
Q ss_pred EEEcCChHHHHHHHHHhhcCC--CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEE
Q 038416 76 VYLTLGCSQAIEISLSVLARP--GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 76 i~~~~g~~~a~~~~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
|++|.++...=..++..|.+. |.+|.+..-.-..... +. ..+.+++..++ .|.+.+.++++ +...|+
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~--~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi 70 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA--AQGITVRQADY-------GDEAALTSALQ-GVEKLL 70 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH--HTTCEEEECCT-------TCHHHHHHHTT-TCSEEE
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh--cCCCeEEEcCC-------CCHHHHHHHHh-CCCEEE
Confidence 556655333334455556555 7666543222111221 12 23444433322 26778888776 455666
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
.+....+.. ...-.+.+++.|++.++
T Consensus 71 ~~a~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 71 LISSSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp ECC-----------CHHHHHHHHHHHHTC
T ss_pred EeCCCCchH---HHHHHHHHHHHHHHcCC
Confidence 554332211 12335778888887765
No 363
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=29.22 E-value=1.9e+02 Score=24.53 Aligned_cols=143 Identities=15% Similarity=0.093 Sum_probs=66.9
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCC--------------h-H---HHHH
Q 038416 26 DSTVAEDAVVDALRTAHYNCYSPTLGVPSARRGIADYLNRDLPYKLSPEDVYLTLG--------------C-S---QAIE 87 (387)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g--------------~-~---~a~~ 87 (387)
..+.+.+++..+++.+. ........+..-++.+.++++. ..+++++++= + . .++.
T Consensus 68 ~~~~~~~~l~~Al~~Gi-~~~DTA~~Yg~sE~~lG~al~~------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e 140 (292)
T 4exb_A 68 DDREAADLLALARDLGI-NLIDTAPAYGRSEERLGPLLRG------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVE 140 (292)
T ss_dssp CHHHHHHHHHHHHHTTC-CEEECCTTSTTHHHHHHHHHTT------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC-CEEEcCCccchHHHHHHHHhcc------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHH
Confidence 34678888888888641 1111111121346778888753 3455655421 1 1 2333
Q ss_pred HHHHhhc-CCCCeEEEcCCCCc--------chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCC
Q 038416 88 ISLSVLA-RPGANILIPRPGYP--------LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPG 158 (387)
Q Consensus 88 ~~~~~l~-~~g~~vl~~~p~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 158 (387)
..+.-|- ..=|-+++-.|... .+..+.+.-..| .+..+-+. + .+++.++++++. ..+ +..+-
T Consensus 141 ~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~G-kir~iGvS---n--~~~~~l~~~~~~-~~~--~Q~~~ 211 (292)
T 4exb_A 141 RSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG-LIGAYGLS---G--KTVEGGLRALRE-GDC--AMVTY 211 (292)
T ss_dssp HHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTT-SEEEEEEE---C--SSHHHHHHHHHH-SSE--EEEEC
T ss_pred HHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCC-CceEEEeC---C--CCHHHHHHHHHh-hcE--Eeecc
Confidence 3333331 11255666666211 111111100223 45555442 2 256677766654 222 22233
Q ss_pred CCccccCCHHHHHHHHHHHHhcCcEEeeccc
Q 038416 159 NPCGNVFSYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 159 nptG~~~~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
||.-.. . .++.+.|+++|+.++.=..
T Consensus 212 ~~~~~~----~-~~l~~~~~~~gi~v~a~sp 237 (292)
T 4exb_A 212 NLNERA----E-RPVIEYAAAHAKGILVKKA 237 (292)
T ss_dssp SSSCCT----T-HHHHHHHHHTTCEEEEECC
T ss_pred ccccCC----H-HHHHHHHHHCCcEEEEecc
Confidence 333211 1 6788888888887765433
No 364
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=29.00 E-value=2.3e+02 Score=23.03 Aligned_cols=98 Identities=13% Similarity=0.058 Sum_probs=48.3
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR-----NTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 345566555544455666677889888775433322222221 0134555665555422 45555554432
Q ss_pred -CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
...+++.+......+ .-.+.+++++..++
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 334444333222222 23566777766654
No 365
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=28.77 E-value=2.1e+02 Score=23.41 Aligned_cols=31 Identities=26% Similarity=0.167 Sum_probs=19.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3466665555444566666777888877653
No 366
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=28.61 E-value=29 Score=24.10 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCcEEeeccccc
Q 038416 170 LQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-.+|.++++++|++++.|..-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCeEEECHHHH
Confidence 5788899999999999997644
No 367
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=28.60 E-value=78 Score=28.25 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.+++++|.++|+++|+-+++|=.-..|.
T Consensus 73 ~~~~~~l~~~a~~~g~~vi~DVsp~~~~ 100 (385)
T 1x7f_A 73 VAEFKEIINHAKDNNMEVILDVAPAVFD 100 (385)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEECTTCC-
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHH
Confidence 3779999999999999999997766543
No 368
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=28.54 E-value=2.4e+02 Score=22.97 Aligned_cols=31 Identities=32% Similarity=0.205 Sum_probs=19.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3566666555444556666777888877654
No 369
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=28.40 E-value=2.3e+02 Score=22.88 Aligned_cols=96 Identities=9% Similarity=-0.049 Sum_probs=45.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCC-CCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRP-GYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p-~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..- .-........ ....+.++..+..+.. |.++++++++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA-----NAEDVTNMVKQTVDVF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 4666655554445556667778888776432 2111111111 0023445555554322 55666655432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3445543332222221 245566666554
No 370
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.34 E-value=2e+02 Score=23.66 Aligned_cols=99 Identities=13% Similarity=0.012 Sum_probs=48.9
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
...+++|.++..-=..+...|.+.|.+|++....-........ ....+.++..+..+.. |.++++++++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMKA 85 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 3456666665544455666677889888775443322222221 0034556666655432 45555554432
Q ss_pred --CceEEEEeCCC-CCccc--cCCHHHHHHHHHH
Q 038416 148 --NTVAIVIINPG-NPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 --~~~~v~l~~p~-nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+... .+.+. -.+.+++++..++
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 33444433322 12222 3566667666553
No 371
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.33 E-value=2.6e+02 Score=23.27 Aligned_cols=97 Identities=12% Similarity=0.001 Sum_probs=49.4
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc-------h---HHHhhccCCCceeeeeccCCCCCccCChhhHH
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL-------Y---EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVE 142 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~-------~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 142 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-.. . ..... ..+.++..+..+.. |.++++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE--EAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH--HHTSEEEEEECCTT-----SHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH--hcCCcEEEEECCCC-----CHHHHH
Confidence 3456666665555556666777889887765333221 1 12222 34556666655432 455555
Q ss_pred Hhhcc------CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 143 ALADE------NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 143 ~~~~~------~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
++++. +...++.+......+. -.+.++++++.++
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 54431 3444443333222222 3566777766653
No 372
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=28.28 E-value=93 Score=26.22 Aligned_cols=73 Identities=10% Similarity=-0.060 Sum_probs=44.9
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIAR 175 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~ 175 (387)
+|++|.+.. |++...... ..+.++..++.++..+. . ++...+.+-+...+|++ ||..+-..-+.+|.+
T Consensus 140 ~g~kV~vIG--~fP~i~~~~--~~~~~l~V~E~~p~~g~-~-p~~~~~~~lp~~D~vii------TgstlvN~Tl~~lL~ 207 (270)
T 3l5o_A 140 KGKKVGVVG--HFPHLESLL--EPICDLSILEWSPEEGD-Y-PLPASEFILPECDYVYI------TCASVVDKTLPRLLE 207 (270)
T ss_dssp TTSEEEEES--CCTTHHHHH--TTTSEEEEEESSCCTTC-E-EGGGHHHHGGGCSEEEE------ETHHHHHTCHHHHHH
T ss_pred CCCEEEEEC--CchhHHHHH--hcCCCEEEEECCCCCCC-C-ChhHHHHhhccCCEEEE------EeehhhcCCHHHHHh
Confidence 467887765 335555556 67778888888776542 2 23323334456677776 444443344899999
Q ss_pred HHHhc
Q 038416 176 TARNL 180 (387)
Q Consensus 176 ~~~~~ 180 (387)
+|++-
T Consensus 208 ~~~~a 212 (270)
T 3l5o_A 208 LSRNA 212 (270)
T ss_dssp HTTTS
T ss_pred hCCCC
Confidence 99754
No 373
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=28.27 E-value=2.5e+02 Score=23.11 Aligned_cols=97 Identities=11% Similarity=-0.078 Sum_probs=45.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD------ 146 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------ 146 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL-----SRTERDKLMQTVAHVF 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 456666655554456666677788887765432222222111 0023545555554322 4555555442
Q ss_pred -cCceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 147 -ENTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 147 -~~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
....+++.+......+ .-.+.++++++.+
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2334444333222222 1245666666554
No 374
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=27.81 E-value=46 Score=29.90 Aligned_cols=28 Identities=29% Similarity=0.358 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 5899999999999999999999887643
No 375
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=27.73 E-value=2.4e+02 Score=23.28 Aligned_cols=98 Identities=18% Similarity=-0.007 Sum_probs=47.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+.++. -|.++++++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLKEF 103 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 355666655554455666677889888765443322222211 002344455444432 245555554432
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+......+. ..+.+++++..++
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443332222221 3466777666553
No 376
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=27.66 E-value=1.1e+02 Score=25.12 Aligned_cols=62 Identities=19% Similarity=0.004 Sum_probs=33.9
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
..+++|.++..-=..+.+.|.+.|.+|++..- ....... ..+.++..+..+.. |.+++++++
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~--~~~~~~~~~~~D~~-----~~~~v~~~~ 71 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVA--DLGDRARFAAADVT-----DEAAVASAL 71 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHH--HTCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHH--hcCCceEEEECCCC-----CHHHHHHHH
Confidence 34556655554445566667778888776543 2233444 45555666655432 455555544
No 377
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=27.57 E-value=52 Score=29.95 Aligned_cols=28 Identities=18% Similarity=0.294 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 5899999999999999999998876543
No 378
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=27.54 E-value=1.7e+02 Score=27.66 Aligned_cols=77 Identities=8% Similarity=0.046 Sum_probs=45.9
Q ss_pred CCCCeEEEcCCCCcch-------HHHhhccCCCceeeeecc--CCCCCccCChhhHHHhhcc-CceEEEEeCCCCCcccc
Q 038416 95 RPGANILIPRPGYPLY-------EIHAAGSNNNLEARHYDL--LPEKRWEVDLDGVEALADE-NTVAIVIINPGNPCGNV 164 (387)
Q Consensus 95 ~~g~~vl~~~p~~~~~-------~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~ 164 (387)
+++|.|++.....++. ..... ..|++++.... ...++ ..|.++|...++. +++.++.++.. .
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~--~~g~~v~~~~~~~i~~Sg-Ha~~~eL~~~i~~~~Pk~vipvHGe-----~ 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLY--ALGAYVLYPPTYKVHASG-HASQEELKLILNLTTPRFFLPWHGE-----V 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHH--HTTCEEECTTTSSSCCCS-SCCHHHHHHHHHHHCCSEEEEESBC-----H
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCcee--eCCCEEEEccCCceEEeC-CCCHHHHHHHHHhcCCCEEEEEcCC-----H
Confidence 6789999887766654 22333 56777664321 01122 3577777776543 46667766632 2
Q ss_pred CCHHHHHHHHHHHHhcCc
Q 038416 165 FSYQHLQKIARTARNLGI 182 (387)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~ 182 (387)
..+.++++++++.|+
T Consensus 409 ---~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 ---RHQMNFKWLAESMSR 423 (562)
T ss_dssp ---HHHHHHHHHHHTSSS
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 446777788877765
No 379
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=27.53 E-value=2.4e+02 Score=22.72 Aligned_cols=68 Identities=18% Similarity=0.037 Sum_probs=35.7
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhh
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALA 145 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (387)
...+++|.++..-=..+.+.|.+.|.+|++....-........ ....+.++..+..+.. |.+++++.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 77 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS-----DPESAKAMA 77 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHH
Confidence 3456666665555556666677888888775443322222222 0023556666655422 455555544
No 380
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.38 E-value=31 Score=23.98 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=18.7
Q ss_pred HHHHHHHHHhcCcEEeeccccc
Q 038416 170 LQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~D~~~~ 191 (387)
-.+|.++++++|++++.|-.-+
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCeecCHHHH
Confidence 5788899999999999996554
No 381
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=27.38 E-value=2.1e+02 Score=24.01 Aligned_cols=98 Identities=15% Similarity=0.036 Sum_probs=46.0
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
...+++|.++..-=..+...|.+.|.+|++..-.-........ ....+.++..+..+. -|.++++++++.
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVAQIESE 108 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 3456666655544456666677788887765432221111111 002344555554432 255666555432
Q ss_pred --CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 --NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 --~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
...+++.+......+. -.+.++++++.+
T Consensus 109 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 109 VGIIDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp TCCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred cCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2344443332222221 245566666554
No 382
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.21 E-value=48 Score=30.19 Aligned_cols=28 Identities=46% Similarity=0.568 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 5999999999999999999998887543
No 383
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=27.10 E-value=41 Score=32.99 Aligned_cols=28 Identities=29% Similarity=0.439 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 5999999999999999999999987543
No 384
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.01 E-value=2.5e+02 Score=22.73 Aligned_cols=50 Identities=10% Similarity=-0.030 Sum_probs=22.0
Q ss_pred CEEEcCC-hHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeecc
Q 038416 75 DVYLTLG-CSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDL 128 (387)
Q Consensus 75 ~i~~~~g-~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~ 128 (387)
+|.+..+ -.+++..+-..+.+.|..|++...+ ....++ ...+.+++.+++
T Consensus 40 ~I~vi~~~le~av~~a~~~~~~~~~dVIISRGg---ta~~Lr-~~~~iPVV~I~v 90 (225)
T 2pju_A 40 NITPIQLGFEKAVTYIRKKLANERCDAIIAAGS---NGAYLK-SRLSVPVILIKP 90 (225)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHH---HHHHHH-TTCSSCEEEECC
T ss_pred eEEEecCcHHHHHHHHHHHHhcCCCeEEEeCCh---HHHHHH-hhCCCCEEEecC
Confidence 3444333 3445555544433333345554422 222333 034566666654
No 385
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=26.92 E-value=99 Score=18.00 Aligned_cols=28 Identities=11% Similarity=0.035 Sum_probs=19.5
Q ss_pred CeEEEEee-CChHhHHHHHHHHHHHHHHh
Q 038416 356 NWLRIAFA-AEPATLEDGLERIKAFCQRH 383 (387)
Q Consensus 356 ~~~Ri~~~-~~~e~~~~~~~~l~~~~~~~ 383 (387)
..+||++. .++.+.++....+-++..++
T Consensus 2 ervrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 2 ERVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 35899994 57777777777776666654
No 386
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=26.91 E-value=1.6e+02 Score=21.60 Aligned_cols=42 Identities=10% Similarity=0.029 Sum_probs=26.5
Q ss_pred hHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 140 GVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 140 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
.++++++.+.+.+++.. . .. -+++.+.|+++|+.+|-+.+..
T Consensus 85 v~~~~~~~g~~~i~~~~-~----~~-----~~~l~~~a~~~Gi~~igpnc~g 126 (138)
T 1y81_A 85 VAKEAVEAGFKKLWFQP-G----AE-----SEEIRRFLEKAGVEYSFGRCIM 126 (138)
T ss_dssp HHHHHHHTTCCEEEECT-T----SC-----CHHHHHHHHHHTCEEECSCCHH
T ss_pred HHHHHHHcCCCEEEEcC-c----cH-----HHHHHHHHHHCCCEEEcCCcce
Confidence 34444454666665533 1 11 3778888889999988777765
No 387
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=26.89 E-value=43 Score=30.92 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
.++++++++.|++.|+-||.|-++...
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 599999999999999999999988764
No 388
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=26.84 E-value=98 Score=24.77 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=24.1
Q ss_pred CceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 148 NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.+.+|+..-..|+.|..+. +.++.+++++||+.+|.
T Consensus 159 ~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 4445543333478899987 56666777799988763
No 389
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=26.73 E-value=2.8e+02 Score=23.16 Aligned_cols=96 Identities=18% Similarity=0.078 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc----hHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL----YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-.. ...... ..+.++..+..+.. |.++++++++.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--KEGVKCVLLPGDLS-----DEQHCKDIVQETV 120 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--TTTCCEEEEESCTT-----SHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--hcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 456666665555556666777889887765433221 222334 45666666655432 45555554432
Q ss_pred ----CceEEEEeCCC-CCccc--cCCHHHHHHHHHH
Q 038416 148 ----NTVAIVIINPG-NPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ----~~~~v~l~~p~-nptG~--~~~~~~~~~l~~~ 176 (387)
+...++.+... .+.+. ..+.++++++.++
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 33444433222 12221 2466777776654
No 390
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=26.57 E-value=31 Score=33.91 Aligned_cols=28 Identities=32% Similarity=0.500 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~ 342 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVY 342 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4899999999999999999999987643
No 391
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=26.45 E-value=44 Score=31.24 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 5999999999999999999999887643
No 392
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=26.42 E-value=44 Score=30.86 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
.++++++++.|++.|+-||.|-++...
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 599999999999999999999988764
No 393
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.33 E-value=57 Score=30.57 Aligned_cols=28 Identities=29% Similarity=0.373 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~ 119 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMN 119 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcC
Confidence 5999999999999999999999988654
No 394
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.29 E-value=1.6e+02 Score=24.32 Aligned_cols=30 Identities=20% Similarity=0.185 Sum_probs=19.0
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
.+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITG 37 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 456665555444556666777888877654
No 395
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=26.24 E-value=3.2e+02 Score=23.67 Aligned_cols=95 Identities=14% Similarity=-0.019 Sum_probs=47.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcc----------hHHHhhccCCCceeeeeccCCCCCccCChhhHHH
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPL----------YEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEA 143 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 143 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-.. ...... ..+.++..+.++.. |.+++++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~--~~g~~~~~~~~Dv~-----d~~~v~~ 118 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE--AVGGKALPCIVDVR-----DEQQISA 118 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH--HTTCEEEEEECCTT-----CHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH--hcCCeEEEEEccCC-----CHHHHHH
Confidence 345566555544455666677888877765332221 122233 45666666655432 5566655
Q ss_pred hhcc------CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 144 LADE------NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 144 ~~~~------~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+++. ...+++.+......+ .-.+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5432 344444333222211 2355666666554
No 396
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=26.16 E-value=84 Score=29.61 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=35.9
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeecc
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADE 188 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~ 188 (387)
.+.++++++.....|-+-..+.+.... .+..+++.++|++|++.+|+++
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFF--IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHH--HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHH--HHHHHHHHHHHHhcCCEEEEeC
Confidence 466777887777788777765544433 2456788899999999998875
No 397
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=25.94 E-value=3e+02 Score=23.31 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=19.6
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
..+++|.++..-=..+...|.+.|.+|++.
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~ 76 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAI 76 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEE
Confidence 345666655554456666777889888765
No 398
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.93 E-value=1.9e+02 Score=24.56 Aligned_cols=71 Identities=10% Similarity=-0.046 Sum_probs=0.0
Q ss_pred ccCCCceeeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEee
Q 038416 116 GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVIA 186 (387)
Q Consensus 116 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li~ 186 (387)
+.....-+..+..+...+..+|.+.+++.++. +..--++...++-=+..++.+|.+++++.+.+. +++||+
T Consensus 5 ~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 5 FTMLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CCCCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred ccccCeeEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
No 399
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.84 E-value=46 Score=30.77 Aligned_cols=27 Identities=37% Similarity=0.426 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
.++++++++.|++.|+-||.|-++...
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 599999999999999999999988754
No 400
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=25.82 E-value=2.4e+02 Score=23.49 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=20.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRP 105 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p 105 (387)
..+++|.++...=..+...|.+.|.+|++...
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 35666666555445566667778888776543
No 401
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.73 E-value=52 Score=30.32 Aligned_cols=28 Identities=21% Similarity=0.436 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 5999999999999999999999887544
No 402
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=25.72 E-value=1.5e+02 Score=25.11 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=31.1
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh---cc-CceEEEEeCCC
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA---DE-NTVAIVIINPG 158 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~~~v~l~~p~ 158 (387)
++..+++..+.| ..+++ .+|++...+... +..+++..|.+.+ +. +.++| +..++
T Consensus 189 ~~~~~v~~H~af---~Yf~~--~yGl~~~~~~~~---~~eps~~~l~~l~~~ik~~~v~~I-f~e~~ 246 (291)
T 1pq4_A 189 PQRKFIVFHPSW---AYFAR--DYNLVQIPIEVE---GQEPSAQELKQLIDTAKENNLTMV-FGETQ 246 (291)
T ss_dssp SCCEEEESSCCC---HHHHH--HTTCEEEESCBT---TBCCCHHHHHHHHHHHHTTTCCEE-EEETT
T ss_pred CCCEEEEECCch---HHHHH--HCCCEEeecccC---CCCCCHHHHHHHHHHHHHcCCCEE-EEeCC
Confidence 467788877765 34667 788887665422 2355666655543 33 34444 44554
No 403
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.59 E-value=1.1e+02 Score=23.21 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=38.2
Q ss_pred HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 111 EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 111 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
...++ ..|.++++... ..+++++.+++. .+..+|.++....+ ..+.++++++.+++.+
T Consensus 39 a~~l~--~~G~eVi~lG~------~~p~e~lv~aa~~~~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 39 ARALR--DAGFEVVYTGL------RQTPEQVAMAAVQEDVDVIGVSILNGA-----HLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHH--HTTCEEECCCS------BCCHHHHHHHHHHTTCSEEEEEESSSC-----HHHHHHHHHHHHHHTT
T ss_pred HHHHH--HCCCEEEECCC------CCCHHHHHHHHHhcCCCEEEEEeechh-----hHHHHHHHHHHHHhcC
Confidence 34455 78889887654 357788777664 46777777654432 2366888888887653
No 404
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=25.53 E-value=2.7e+02 Score=22.66 Aligned_cols=96 Identities=9% Similarity=0.006 Sum_probs=48.5
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEc-CCCCcchH---HHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIP-RPGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++. ...-.... .... ..+.++..+..+.. |.++++++++.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 80 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE--KLGRSALAIKADLT-----NAAEVEAAISAA 80 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH--TTTSCCEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--hcCCceEEEEcCCC-----CHHHHHHHHHHH
Confidence 3456666655554456666777889888765 43332222 2223 34555665555322 55665555432
Q ss_pred -----CceEEEEeCC-CC-Cccc--cCCHHHHHHHHHH
Q 038416 148 -----NTVAIVIINP-GN-PCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -----~~~~v~l~~p-~n-ptG~--~~~~~~~~~l~~~ 176 (387)
+...+ +.+. .. +.+. -.+.+++++..++
T Consensus 81 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 81 ADKFGEIHGL-VHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHHCSEEEE-EECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHhCCCCEE-EECCCccCCCCChhhCCHHHHHHHHHH
Confidence 23333 3443 22 2222 3566666666653
No 405
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=25.32 E-value=2.9e+02 Score=22.92 Aligned_cols=98 Identities=11% Similarity=-0.119 Sum_probs=49.0
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++....-........ ....+.++..+..+.. |.++++++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVS-----DELQMRNAVRDLVLKF 103 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHh
Confidence 355666665555556666677889888775433322222222 0134556666655432 55555555432
Q ss_pred -CceEEEEeCCCC-Cccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGN-PCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~n-ptG~--~~~~~~~~~l~~~ 176 (387)
...+++.+.... +.+. -.+.+++++..++
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 344444333221 1121 3566666666553
No 406
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=25.26 E-value=2.6e+02 Score=22.72 Aligned_cols=97 Identities=9% Similarity=-0.113 Sum_probs=44.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc------
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD------ 146 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------ 146 (387)
..+++|.++...=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+. -+.++++++++
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-----SLRPEREKLMQTVSSMF 89 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 456666655544456666677788777765432221121111 002344455554432 24555555443
Q ss_pred -cCceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 147 -ENTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 147 -~~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
....+++.+....+.+. ..+.+++.+..+
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24455655443222221 235566655544
No 407
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=25.25 E-value=3e+02 Score=22.96 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=19.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4566666555444556666777888877654
No 408
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=25.23 E-value=1.8e+02 Score=24.90 Aligned_cols=64 Identities=11% Similarity=-0.028 Sum_probs=0.0
Q ss_pred eeeeccCCCCCccCChhhHHHhhcc---CceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEee
Q 038416 123 ARHYDLLPEKRWEVDLDGVEALADE---NTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVIA 186 (387)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li~ 186 (387)
+..+..+...+..+|.+.+++.++. +..--++...++-=+..++.+|.+++++.+.+. +++||+
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
No 409
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.03 E-value=62 Score=29.88 Aligned_cols=28 Identities=18% Similarity=0.406 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMG 124 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcC
Confidence 4899999999999999999999987644
No 410
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=25.02 E-value=1.7e+02 Score=21.91 Aligned_cols=59 Identities=22% Similarity=0.202 Sum_probs=37.0
Q ss_pred ccCChhhHHHhhcc-CceEEEEeCCCCCccccCCH-HHHHHHHH-HHHhcCcEE-eecccccc
Q 038416 134 WEVDLDGVEALADE-NTVAIVIINPGNPCGNVFSY-QHLQKIAR-TARNLGIIV-IADEVYNH 192 (387)
Q Consensus 134 ~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~-~~~~~l~~-~~~~~~~~l-i~D~~~~~ 192 (387)
...+.+.|.+.++. +...+++-.|-|.-|..-.. ...+.+++ ++++.++++ ++||.++.
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 34578888888876 56778888886555554222 22345553 344557654 67998874
No 411
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=25.00 E-value=96 Score=28.69 Aligned_cols=73 Identities=10% Similarity=0.135 Sum_probs=44.7
Q ss_pred CCCCcchHHHhhccCC-CceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 104 RPGYPLYEIHAAGSNN-NLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 104 ~p~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
.|.|..|.+... .- ......+-++. ..-++.++++.+.+.+ +++...+.+ .+..+++.+.|+++|+
T Consensus 21 ~Pv~~~~~~~~~--~p~~~DlavI~vPa----~~v~~~v~e~~~~Gv~-~viis~Gf~------~~~~~~l~~~A~~~g~ 87 (480)
T 3dmy_A 21 LTQVRRWDSACQ--KLPDANLALISVAG----EYAAELANQALDRNLN-VMMFSDNVT------LEDEIQLKTRAREKGL 87 (480)
T ss_dssp CEEESSHHHHHH--HSTTCCEEEECSCH----HHHHHHHHHHHHTTCE-EEECCCCCC------HHHHHHHHHHHHHTTC
T ss_pred CcccchHHHHHh--cCCCCCEEEEecCH----HHHHHHHHHHHhcCCC-EEEECCCCC------HHHHHHHHHHHHHcCC
Confidence 455556666555 32 33333332221 2245777888887888 544443332 5777899999999999
Q ss_pred EEeeccc
Q 038416 183 IVIADEV 189 (387)
Q Consensus 183 ~li~D~~ 189 (387)
.+|==.+
T Consensus 88 rliGPNc 94 (480)
T 3dmy_A 88 LVMGPDC 94 (480)
T ss_dssp CEECSSC
T ss_pred EEEecCc
Confidence 8886655
No 412
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=24.93 E-value=2e+02 Score=23.67 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=20.2
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
...+++|.++...=..+...|.+.|.+|++..
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 34566666555444566666777888877654
No 413
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.88 E-value=2.6e+02 Score=22.63 Aligned_cols=95 Identities=13% Similarity=0.000 Sum_probs=45.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC-CCCcch---HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR-PGYPLY---EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~-p~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++.. ..-... ..... ..+.++..+..+. -|.++++++++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK--ALGFDFYASEGNV-----GDWDSTKQAFDKVK 86 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH--HTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCeeEEEecCC-----CCHHHHHHHHHHHH
Confidence 3556665555444556666778887776632 222222 22223 3455555555432 245555554432
Q ss_pred ----CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 ----NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ----~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+...++.+......+ .-.+.+++++..+
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 234444332222222 1246666666655
No 414
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=24.78 E-value=55 Score=30.08 Aligned_cols=28 Identities=32% Similarity=0.516 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 5899999999999999999998887543
No 415
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=24.75 E-value=2.8e+02 Score=22.41 Aligned_cols=94 Identities=11% Similarity=-0.047 Sum_probs=45.7
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------C
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------N 148 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 148 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-........ .. .+...+..+. -|.++++++++. +
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK--ER-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--TC-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hc-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666665554556666677889888775433322333333 22 2233333322 255555555432 3
Q ss_pred ceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 149 TVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 149 ~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
...++.+....+.+. ..+.++++++.++
T Consensus 76 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CCEEEECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444444333222222 3456666666553
No 416
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.66 E-value=3e+02 Score=22.72 Aligned_cols=98 Identities=11% Similarity=-0.019 Sum_probs=49.6
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCCCeEEEc-CCCCcch---HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPGANILIP-RPGYPLY---EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
....+++|.++..-=..+.+.|.+.|.+|++. ...-... ...+. ..+.++..+..+. -|.++++++++.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--QAGGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCcEEEEECCC-----CCHHHHHHHHHH
Confidence 34456666665554556666777889887765 3221111 12223 3465666665542 255666555432
Q ss_pred ------CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ------NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ------~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
...+++.+......+. -.+.+++++..++
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3344443332222221 2466777776653
No 417
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=24.63 E-value=2.1e+02 Score=23.35 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=46.2
Q ss_pred CCCCEEEcCCh--HHHHHHHHHhhcCCCCeEEEcCCCCcch-H----HHhhccCCCceeeeeccCCCCCccCChhhHHHh
Q 038416 72 SPEDVYLTLGC--SQAIEISLSVLARPGANILIPRPGYPLY-E----IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEAL 144 (387)
Q Consensus 72 ~~~~i~~~~g~--~~a~~~~~~~l~~~g~~vl~~~p~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 144 (387)
....+++|.++ ...=..+.+.|.+.|.+|++..-.-... . .... ..+.++..+.++.. |.++++++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~-----~~~~v~~~ 91 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK--TYGIKAKAYKCQVD-----SYESCEKL 91 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHH--HHCCCEECCBCCTT-----CHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHH--hcCCceeEEecCCC-----CHHHHHHH
Confidence 34456666654 3333445556677888877653332221 1 2222 23555655555322 55555554
Q ss_pred hcc------CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 145 ADE------NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 145 ~~~------~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
++. ....++.+....+.+. -.+.+++.+..+
T Consensus 92 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 432 3344544333222221 235666666654
No 418
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.53 E-value=2.6e+02 Score=23.07 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=19.8
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3466666555544556666777888877654
No 419
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=24.52 E-value=1.3e+02 Score=18.47 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=23.0
Q ss_pred eEEEEe--eCChHhHHHHHHHHHHHHHHhhh
Q 038416 357 WLRIAF--AAEPATLEDGLERIKAFCQRHAK 385 (387)
Q Consensus 357 ~~Ri~~--~~~~e~~~~~~~~l~~~~~~~~~ 385 (387)
.++|.+ +.+.++..++.+.|.+++.+..+
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg 32 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHETLG 32 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 467777 56889999999999998887553
No 420
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.52 E-value=49 Score=30.98 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
+.++++++++.|++.|+-||.|-++...
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 3589999999999999999999988753
No 421
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=24.52 E-value=2.7e+02 Score=22.20 Aligned_cols=96 Identities=11% Similarity=-0.047 Sum_probs=44.1
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEc-CCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIP-RPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++. ...-........ ....+.++..+..+. -|.++++++++.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 35566555444455666677788777762 332211111111 002244555554432 255666655532
Q ss_pred -CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 -NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 -~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+...++.+......+. ..+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 3455554433222221 245555555544
No 422
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=24.49 E-value=61 Score=27.81 Aligned_cols=78 Identities=18% Similarity=0.046 Sum_probs=43.6
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeec--cCCCCCccCChhhHHHhhccCceEE
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYD--LLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
+++.|++. ++..+- .+ ++++|++..-.+-+. ...+ ..|.+++.++ ........++++.+.++....+.+.
T Consensus 121 D~v~TSsn--a~~~v~-~~--~~~~iif~pD~~Lg~-~l~~--~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P~a~ 192 (300)
T 1wzu_A 121 DVTVTSAN--AVEVVK-KL--DSDVVIFGPDKNLAH-YVAK--MTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAK 192 (300)
T ss_dssp SEEECTTT--HHHHHH-TC--SCSEEEEESCHHHHH-HHHH--HHCCEEEEC-----------CCHHHHHHHHHHCTTCE
T ss_pred CEEEchHH--HHHHHH-hC--CCCeEEEECChhHHH-HHHH--HcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCCCCE
Confidence 55555543 344333 33 567776644333332 2333 3488888776 3333344678999999888888888
Q ss_pred EEeCCCCC
Q 038416 153 VIINPGNP 160 (387)
Q Consensus 153 ~l~~p~np 160 (387)
++.+|.-|
T Consensus 193 v~~HPEc~ 200 (300)
T 1wzu_A 193 LMIHPECI 200 (300)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
Confidence 89999643
No 423
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=24.47 E-value=59 Score=30.05 Aligned_cols=27 Identities=33% Similarity=0.456 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCcEEeeccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHL 193 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~ 193 (387)
.++++++++.|++.|+-||.|-++...
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 107 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHT 107 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 599999999999999999999887653
No 424
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=24.44 E-value=1.9e+02 Score=23.44 Aligned_cols=92 Identities=12% Similarity=0.015 Sum_probs=43.2
Q ss_pred EEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------Cc
Q 038416 76 VYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------NT 149 (387)
Q Consensus 76 i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~ 149 (387)
+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+. -|.++++++++. +.
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--ELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCC
Confidence 4555544443445556667788887765332222222333 2233444444432 255666665532 23
Q ss_pred eEEEEeCCC-C-Ccc--ccCCHHHHHHHHH
Q 038416 150 VAIVIINPG-N-PCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 150 ~~v~l~~p~-n-ptG--~~~~~~~~~~l~~ 175 (387)
..++ .+.. . +.+ .-.+.+++++..+
T Consensus 76 D~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 76 DILV-NNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp CEEE-ECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CEEE-ECCCcCCCCCchhhCCHHHHHHHHH
Confidence 4444 4332 1 111 2346666666555
No 425
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=24.39 E-value=2.5e+02 Score=24.78 Aligned_cols=18 Identities=22% Similarity=0.235 Sum_probs=9.9
Q ss_pred HHHHhcCeEEEcCCccCC
Q 038416 337 KLAKEESVIILPGRTVGM 354 (387)
Q Consensus 337 ~ll~~~gi~v~~g~~~~~ 354 (387)
.+..+.|+..-.|.+|..
T Consensus 292 ~~~~~~~~~~k~g~w~~~ 309 (366)
T 1xp8_A 292 GLAADMDIIKKAGSFYSY 309 (366)
T ss_dssp HHHHHTTSSEEETTEEES
T ss_pred HHHHHhCeeeccCceeeE
Confidence 344555666666655544
No 426
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=24.39 E-value=99 Score=22.43 Aligned_cols=39 Identities=15% Similarity=0.343 Sum_probs=28.3
Q ss_pred HHHHHHhcCeEEEcCCccCCCCeEEEEee--CChHhHHHHHHH
Q 038416 335 CLKLAKEESVIILPGRTVGMKNWLRIAFA--AEPATLEDGLER 375 (387)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~~~~Ri~~~--~~~e~~~~~~~~ 375 (387)
...|.+..| +.||..+....|+.|.+. .++++|.++++.
T Consensus 71 ~~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 71 VGSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 344445556 669988888999999883 577888777754
No 427
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.36 E-value=1.2e+02 Score=21.88 Aligned_cols=39 Identities=13% Similarity=0.205 Sum_probs=25.9
Q ss_pred hhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 138 LDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 138 ~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
++.++++.+.+.+.+|+. + |.. -+++.+.|+++|+.++-
T Consensus 72 ~~~v~e~~~~g~k~v~~~-~----G~~-----~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFN-P----GTE-----NEELEEILSENGIEPVI 110 (122)
T ss_dssp GGGHHHHHHHCCSEEEEC-T----TCC-----CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEEC-C----CCC-----hHHHHHHHHHcCCeEEC
Confidence 345666666677776653 3 322 25888888899998884
No 428
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=24.34 E-value=55 Score=29.60 Aligned_cols=29 Identities=34% Similarity=0.527 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+-||.|-++....
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 35999999999999999999999987644
No 429
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=24.30 E-value=2.9e+02 Score=23.66 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=19.3
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEc
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIP 103 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~ 103 (387)
.+++|.++..-=..+.+.|.+.|.+|++.
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYAS 35 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEe
Confidence 45666655555556666777889888753
No 430
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=24.23 E-value=55 Score=29.09 Aligned_cols=66 Identities=24% Similarity=0.309 Sum_probs=39.4
Q ss_pred CCCceeeeeccCCCCCccCChhhHHHhhccCc----eEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 118 NNNLEARHYDLLPEKRWEVDLDGVEALADENT----VAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 118 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
..++++..+-+.+..+|.+..+.+-+.. ..+ .... .++ .+.+-.++.+++++|++.|+++||-||-
T Consensus 44 ~~KlN~lH~HltDdq~~rle~~~~~~~~-~~~~~~~~g~~-~~~-~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 44 LSGGNFLHLHFSDHENYAIESHLLNQRA-ENAVQGKDGIY-INP-YTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HTTCCEEEEECBSSSCBCBCBTTTTBCG-GGSEECTTSCE-ECT-TTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCcEEEEEEEcCCCceeeecchhhhh-hhhccccCCCc-CCC-CCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 6788877777765556655433221110 000 0000 111 1234578999999999999999998874
No 431
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=24.22 E-value=2.8e+02 Score=22.28 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=46.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCC-CcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPG-YPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE---- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-. -........ ....+.++..+..+. -|.++++++++.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADL-----ATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 356666655544455666677788777764332 222222211 002354555555432 255666655532
Q ss_pred --CceEEEEeCCC-CCccc--cCCHHHHHHHHH
Q 038416 148 --NTVAIVIINPG-NPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 --~~~~v~l~~p~-nptG~--~~~~~~~~~l~~ 175 (387)
+...++.+... .+.+. -.+.+++++..+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 34555544332 22221 234555555444
No 432
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.21 E-value=2.3e+02 Score=22.59 Aligned_cols=91 Identities=5% Similarity=-0.092 Sum_probs=45.2
Q ss_pred CEEEcCChHHHHHHHHHhhcCCC-CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEE
Q 038416 75 DVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIV 153 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 153 (387)
.|++|.++...=..++..|++.| .+|++..-.-. .... .....+..+..+ -.|.++++++++ +..+|+
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~---~~~~--~~~~~~~~~~~D-----l~d~~~~~~~~~-~~D~vv 93 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA---KIHK--PYPTNSQIIMGD-----VLNHAALKQAMQ-GQDIVY 93 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG---GSCS--SCCTTEEEEECC-----TTCHHHHHHHHT-TCSEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh---hhcc--cccCCcEEEEec-----CCCHHHHHHHhc-CCCEEE
Confidence 56777655444455666777788 56655332111 1111 122233333332 126788888776 455565
Q ss_pred EeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 154 IINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 154 l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
.+.... .. ....+.+++.+++.+
T Consensus 94 ~~a~~~--~~---~~~~~~~~~~~~~~~ 116 (236)
T 3qvo_A 94 ANLTGE--DL---DIQANSVIAAMKACD 116 (236)
T ss_dssp EECCST--TH---HHHHHHHHHHHHHTT
T ss_pred EcCCCC--ch---hHHHHHHHHHHHHcC
Confidence 443321 11 123556777776654
No 433
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=23.94 E-value=3.6e+02 Score=23.46 Aligned_cols=51 Identities=22% Similarity=0.331 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEcC---ChHHHHHHHHHhhcCCC-CeEEEcCCCCc
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLTL---GCSQAIEISLSVLARPG-ANILIPRPGYP 108 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~~---g~~~a~~~~~~~l~~~g-~~vl~~~p~~~ 108 (387)
+=|+.+.+...+.-+ ..-.|+... ++.+++..+-.+- +.| |.|++..|.|.
T Consensus 84 eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~-~~Gadavlv~~P~Y~ 138 (343)
T 2v9d_A 84 EERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQ-QAGADGIVVINPYYW 138 (343)
T ss_dssp HHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHH-HHTCSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 335555555443211 122455443 3455555554443 234 88888888875
No 434
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=23.88 E-value=45 Score=30.75 Aligned_cols=28 Identities=21% Similarity=0.465 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+.||.|-++....
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 5999999999999999999999887544
No 435
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.82 E-value=2.2e+02 Score=23.20 Aligned_cols=99 Identities=9% Similarity=-0.074 Sum_probs=46.8
Q ss_pred CCCEEEcCCh-HHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 73 PEDVYLTLGC-SQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 73 ~~~i~~~~g~-~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
...+++|.++ +.-=..+.+.|.+.|.+|++..-.-........ . ...+.++..+..+.. |.++++++++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHHH
Confidence 3456666653 333345555667788888775433322222221 0 022345555555322 45555554432
Q ss_pred ----CceEEEEeCCCCCccc--cCCHHHHHHHHHH
Q 038416 148 ----NTVAIVIINPGNPCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 ----~~~~v~l~~p~nptG~--~~~~~~~~~l~~~ 176 (387)
....++.+....+.+. -.+.+++++..+.
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 3344444333222222 2466667666653
No 436
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=23.72 E-value=2.2e+02 Score=24.35 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=34.9
Q ss_pred CCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEe
Q 038416 132 KRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVI 185 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li 185 (387)
.+..+|.+.+++.++ .+...++++. ++-=+..++.+|.+++++.+.+. +++||
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLAG-TTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESS-TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 345789998888654 3566665443 33334568889999988877653 46665
No 437
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.59 E-value=3e+02 Score=22.44 Aligned_cols=98 Identities=17% Similarity=0.054 Sum_probs=47.9
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCC-ceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNN-LEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+ .++..+..+.. |.++++++++.
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS-----DRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456666665555556666677888888775433322222221 00233 35555554322 45555554431
Q ss_pred ---CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. -.+.+++++..+
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3445544333222221 346666666655
No 438
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=23.47 E-value=2.3e+02 Score=23.50 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=49.5
Q ss_pred HHHHHHhhcCCC-CeEEEcCCCCc---chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCc
Q 038416 86 IEISLSVLARPG-ANILIPRPGYP---LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPC 161 (387)
Q Consensus 86 ~~~~~~~l~~~g-~~vl~~~p~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 161 (387)
+...+..+.+.| |.+++++--+. .+...++ ..|+..+.+-. +. -+.+.+++..+.....+++.+-..-|
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~--~~Gl~~I~lva-P~----t~~eRi~~ia~~a~gFiY~Vs~~GvT 177 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSFEESDDLIKECE--RYNIALITLVS-VT----TPKERVKKLVKHAKGFIYLLASIGIT 177 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHH--HTTCEECEEEE-TT----SCHHHHHHHHTTCCSCEEEECCSCSS
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHH--HcCCeEEEEeC-CC----CcHHHHHHHHHhCCCeEEEEecCCCC
Confidence 344444444556 77887765443 3455556 67777655422 11 13456665555444555555544467
Q ss_pred cccCC-HHHHHHHHHHHHhc-CcEEee
Q 038416 162 GNVFS-YQHLQKIARTARNL-GIIVIA 186 (387)
Q Consensus 162 G~~~~-~~~~~~l~~~~~~~-~~~li~ 186 (387)
|..-+ .+++.++++..+++ ++++++
T Consensus 178 G~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 178 GTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 76532 23456666666654 444444
No 439
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.46 E-value=55 Score=29.85 Aligned_cols=29 Identities=31% Similarity=0.576 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+.||+|-+.....
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 35899999999999999999998876543
No 440
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.33 E-value=2.7e+02 Score=23.37 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=20.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~ 57 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITG 57 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4566666655545566667778888887654
No 441
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=23.28 E-value=2.7e+02 Score=23.01 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=20.3
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRP 105 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p 105 (387)
..+++|.++..-=..+...|.+.|.+|++..-
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 45666665554445566667778888877543
No 442
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=23.27 E-value=2.5e+02 Score=23.93 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=35.3
Q ss_pred CCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEe
Q 038416 132 KRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVI 185 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li 185 (387)
.+..+|.+.+++.++ .+...++++. ++-=+..++.+|.+++++.+.+. +++||
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 26 INGNIDFAKTTKLVNYLIDNGTTAIVVGG-TTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 345799998888654 4566665443 33344568889999999887653 46665
No 443
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=23.21 E-value=58 Score=30.99 Aligned_cols=29 Identities=28% Similarity=0.535 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+-||.|-++....
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 57999999999999999999998887543
No 444
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=23.07 E-value=3.1e+02 Score=22.42 Aligned_cols=102 Identities=11% Similarity=0.015 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhcCCCCeEEEcCCCCc---chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCC
Q 038416 83 SQAIEISLSVLARPGANILIPRPGYP---LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGN 159 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~~~p~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 159 (387)
|+++..+.++ ...|.+|++..|.-. + ..... +.|.....+++.. .+++.+.+ .+..+|++-..+.
T Consensus 34 T~lL~~~~r~-~~~g~kvli~kp~~D~Ryg-~~i~s--r~G~~~~a~~i~~-------~~di~~~~-~~~dvViIDEaQF 101 (234)
T 2orv_A 34 TELMRRVRRF-QIAQYKCLVIKYAKDTRYS-SSFCT--HDRNTMEALPACL-------LRDVAQEA-LGVAVIGIDEGQF 101 (234)
T ss_dssp HHHHHHHHHH-HTTTCCEEEEEETTCCCC--------------CEEEEESS-------GGGGHHHH-TTCSEEEESSGGG
T ss_pred HHHHHHHHHH-HHCCCeEEEEeecCCccch-HHHHh--hcCCeeEEEecCC-------HHHHHHHh-ccCCEEEEEchhh
Confidence 4555555555 456777777655432 2 34444 6676665555421 12233333 3567888888776
Q ss_pred CccccCCHHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccc
Q 038416 160 PCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGV 205 (387)
Q Consensus 160 ptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 205 (387)
-++ +.+++++....|+.||+=.-..+|. +.++.....
T Consensus 102 ~~~-------v~el~~~l~~~gi~VI~~GL~~DF~--~~~F~~~~~ 138 (234)
T 2orv_A 102 FPD-------IVEFCEAMANAGKTVIVAALDGTFQ--RKPFGAILN 138 (234)
T ss_dssp CTT-------HHHHHHHHHHTTCEEEEECCSBCTT--SSBCTTGGG
T ss_pred hhh-------HHHHHHHHHhCCCEEEEEecccccc--cCCcccHHH
Confidence 442 6677777777899999877776643 555554433
No 445
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=23.04 E-value=2.4e+02 Score=25.71 Aligned_cols=101 Identities=10% Similarity=0.105 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhcCCCCeEEE-cCCCC-cchH----HHhhccCCCceeeeeccCCCCCccCChhhH-----HHhhccCceE
Q 038416 83 SQAIEISLSVLARPGANILI-PRPGY-PLYE----IHAAGSNNNLEARHYDLLPEKRWEVDLDGV-----EALADENTVA 151 (387)
Q Consensus 83 ~~a~~~~~~~l~~~g~~vl~-~~p~~-~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~ 151 (387)
|+....+...+.+.|.+|++ ....| .+.. .+.. ..|.++...+. ..++..+ +.+-..+..+
T Consensus 114 TTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~--~~gvpv~~~~~------~~dp~~i~~~al~~a~~~~~Dv 185 (443)
T 3dm5_A 114 TTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLD--RYHIEVFGNPQ------EKDAIKLAKEGVDYFKSKGVDI 185 (443)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHG--GGTCEEECCTT------CCCHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHH--hcCCcEEecCC------CCCHHHHHHHHHHHHHhCCCCE
Confidence 55566666667777866654 33333 3222 2333 44544433221 2344333 2222335778
Q ss_pred EEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 152 IVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 152 v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
+++-.|....-..--..+++.+.+......+++|+|...+
T Consensus 186 VIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 186 IIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp EEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred EEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 8887763211001112445566666666678999997753
No 446
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.96 E-value=2.8e+02 Score=21.92 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=19.0
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
.+++|.++...=..+...|.+.|.+|++..
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 36 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMA 36 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 466666555444556666777888777654
No 447
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=22.92 E-value=64 Score=30.39 Aligned_cols=114 Identities=17% Similarity=0.255 Sum_probs=63.8
Q ss_pred CCCCCCEEEcCChHHHHHHHHHhhc---C----------CCC------eEEEcCCCCc-------------c------hH
Q 038416 70 KLSPEDVYLTLGCSQAIEISLSVLA---R----------PGA------NILIPRPGYP-------------L------YE 111 (387)
Q Consensus 70 ~~~~~~i~~~~g~~~a~~~~~~~l~---~----------~g~------~vl~~~p~~~-------------~------~~ 111 (387)
.+ ++.|.++.++..++.-.+.+|. . .|. ..|...|-|. + +.
T Consensus 83 ~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik~~I 161 (543)
T 3rcn_A 83 EV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVLRFI 161 (543)
T ss_dssp EE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHHHHH
T ss_pred EE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHHHHH
Confidence 45 6788888888777777776653 1 121 1233455543 1 22
Q ss_pred HHhhccCCCceeeeeccCCCCCccCChhhHHHhh-----ccCceEEEE-e--CCCCCccccCCHHHHHHHHHHHHhcCcE
Q 038416 112 IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA-----DENTVAIVI-I--NPGNPCGNVFSYQHLQKIARTARNLGII 183 (387)
Q Consensus 112 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v~l-~--~p~nptG~~~~~~~~~~l~~~~~~~~~~ 183 (387)
+.+. ..++++..+.+.+..+|.+..+..-++- +..+..--. . .-..|.|-.++.+++++|++.|+++||-
T Consensus 162 D~MA--~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~ 239 (543)
T 3rcn_A 162 EVMA--MHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHIT 239 (543)
T ss_dssp HHHH--HTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHH--HcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCE
Confidence 3333 5667776666655555555443322211 111100000 0 0123457789999999999999999998
Q ss_pred Eee
Q 038416 184 VIA 186 (387)
Q Consensus 184 li~ 186 (387)
||=
T Consensus 240 VIP 242 (543)
T 3rcn_A 240 VIP 242 (543)
T ss_dssp EEE
T ss_pred Eee
Confidence 873
No 448
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=22.86 E-value=1.4e+02 Score=25.56 Aligned_cols=54 Identities=17% Similarity=0.134 Sum_probs=36.4
Q ss_pred CCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc----CcEEee
Q 038416 132 KRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL----GIIVIA 186 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~----~~~li~ 186 (387)
.+..+|.+.+++.++ .+...++++. ++-=+..++.+|.+++++.+.+. +++||+
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIENGIDAVVPVG-TTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 345789998888654 3566665433 33344568889999999887654 467765
No 449
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.83 E-value=62 Score=30.82 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+-||.|-++....
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 46999999999999999999999887644
No 450
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=22.72 E-value=67 Score=29.09 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 5999999999999999999999988644
No 451
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=22.64 E-value=3.2e+02 Score=22.33 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=20.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++...=..+.+.|.+.|.+|++..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3566776655555566666777888877653
No 452
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=22.64 E-value=55 Score=16.91 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=15.2
Q ss_pred CHHHHHHHHHHHHhcCcEE
Q 038416 166 SYQHLQKIARTARNLGIIV 184 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~l 184 (387)
.+++++++-+.+++-|+.+
T Consensus 13 tpeelkklkeeakkanirv 31 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhccEEE
Confidence 4589999999999887643
No 453
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=22.63 E-value=1.2e+02 Score=26.16 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=51.3
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEE-cCCC--CcchHH---HhhccCCCceeeeeccCCCCCccCChhhHHHhhcc
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILI-PRPG--YPLYEI---HAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~-~~p~--~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (387)
..|++|.++-..=..++..|++.|..|.+ .... ...-.. ... ..+.+++..++ .|.+++.++++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl-------~d~~~l~~~~~~ 81 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLI-------NEQEAMEKILKE 81 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCT-------TCHHHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeec-------CCHHHHHHHHhh
Confidence 46777766433334455556666755544 3322 111111 122 34555554433 267888887763
Q ss_pred -CceEEEEeCC-CCCccccCCHHHHHHHHHHHHhcC-cEEee
Q 038416 148 -NTVAIVIINP-GNPCGNVFSYQHLQKIARTARNLG-IIVIA 186 (387)
Q Consensus 148 -~~~~v~l~~p-~nptG~~~~~~~~~~l~~~~~~~~-~~li~ 186 (387)
+...|+.+.. .|..| ...+++.|++.+ +..++
T Consensus 82 ~~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 82 HEIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp TTCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEE
T ss_pred CCCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEe
Confidence 4555655544 23322 468888888888 64444
No 454
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=22.47 E-value=1.8e+02 Score=24.59 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEc---CChHHHHHHHHHhhcCCC-CeEEEcCCCCcc
Q 038416 54 SARRGIADYLNRDLPYKLSPEDVYLT---LGCSQAIEISLSVLARPG-ANILIPRPGYPL 109 (387)
Q Consensus 54 ~lr~~ia~~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~ 109 (387)
+=|+.+.+...+.-+ +.-.|+.. +++.+++..+-++- +-| |.+++..|.|..
T Consensus 55 ~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 55 DEKELILKTVIDLVD---KRVPVIAGTGTNDTEKSIQASIQAK-ALGADAIMLITPYYNK 110 (292)
T ss_dssp HHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHH-HcCCCEEEECCCCCCC
Confidence 335555555543211 12345543 34556665555443 234 888888888753
No 455
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=22.32 E-value=66 Score=27.27 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=43.0
Q ss_pred CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhh---cc-CceEEEEeCCCCCccccCCHHHHHHH
Q 038416 98 ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALA---DE-NTVAIVIINPGNPCGNVFSYQHLQKI 173 (387)
Q Consensus 98 ~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~~~v~l~~p~nptG~~~~~~~~~~l 173 (387)
..+++..+.| ..+++ .+|++...+... ..+..+++..+.+.+ +. +.++|+ ..++. ++.-.+.|
T Consensus 164 ~~~vt~H~af---~Y~~~--~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if-~e~~~------~~~~~~~l 230 (282)
T 3mfq_A 164 RYLVTPHDAF---NYFAA--SYDFTLYAPQGV-STDSEVANSDMIETVNLIIDHNIKAIF-TESTT------NPERMKKL 230 (282)
T ss_dssp CEEECSSSCC---HHHHH--HTTCEEECSSCS-SSCSCCCHHHHHHHHHHHHHHTCCEEE-CBTTS------CTHHHHHH
T ss_pred cEEEEECchH---HHHHH--HCCCeEeccccc-CCCCCCCHHHHHHHHHHHHHcCCCEEE-EeCCC------ChHHHHHH
Confidence 4455555544 44677 889887654321 122355666666644 33 455554 45542 22446778
Q ss_pred HHHHHhcCcEEe
Q 038416 174 ARTARNLGIIVI 185 (387)
Q Consensus 174 ~~~~~~~~~~li 185 (387)
.+.+++.|+.++
T Consensus 231 ~~~a~~~g~~v~ 242 (282)
T 3mfq_A 231 QEAVKAKGGQVE 242 (282)
T ss_dssp HHHHHTTSCCCE
T ss_pred HHHHHhcCCceE
Confidence 888888887554
No 456
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=22.22 E-value=1.8e+02 Score=21.38 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=31.6
Q ss_pred hhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEE-eecc
Q 038416 139 DGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV-IADE 188 (387)
Q Consensus 139 ~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~l-i~D~ 188 (387)
.++++++......-++.|++ ++.+.+...+++|+++|+.+ |+++
T Consensus 53 ~~~~~~l~~~~~~~l~ing~------l~~~~~~~YiklA~~~~i~fTiV~~ 97 (133)
T 2ohw_A 53 KEAEHELKNSHNVTLLINGE------LQYQSYSSYIQMASRYGVPFKIVSD 97 (133)
T ss_dssp HHHHHHHHTCSSEEEEEETT------SCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHhhCCCcEEEEcCC------CCHHHHHHHHHHHHHcCCCeEEecC
Confidence 55666777666666777766 56677999999999998744 4444
No 457
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=22.16 E-value=60 Score=27.53 Aligned_cols=24 Identities=4% Similarity=0.202 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHhcCcEEeeccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
+.+.++++++.|.++|+.+|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 457899999999999999999843
No 458
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.07 E-value=2.7e+02 Score=23.65 Aligned_cols=103 Identities=13% Similarity=0.055 Sum_probs=50.5
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-c-cCCCceeeeeccCCCCCccCChhhHHHhhcc-CceE
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-G-SNNNLEARHYDLLPEKRWEVDLDGVEALADE-NTVA 151 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 151 (387)
.|++|.++...=..++..|.+.|.+|++..-.-........ . ...+..+..+..+ -.|.+.++++++. +...
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----l~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETD-----VSDERALARIFDAHPITA 81 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCC-----TTCHHHHHHHHHHSCCCE
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEee-----cCCHHHHHHHHhccCCcE
Confidence 56677655444455666677788888765433222221111 0 0112233333332 2367788887764 4556
Q ss_pred EEEeCCCCCccccC---------CHHHHHHHHHHHHhcCc
Q 038416 152 IVIINPGNPCGNVF---------SYQHLQKIARTARNLGI 182 (387)
Q Consensus 152 v~l~~p~nptG~~~---------~~~~~~~l~~~~~~~~~ 182 (387)
|+.+......+... ...-...+++.|++.++
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 65554433222110 01113467777877764
No 459
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=22.03 E-value=1.3e+02 Score=26.42 Aligned_cols=17 Identities=35% Similarity=0.413 Sum_probs=11.7
Q ss_pred HHHHHHHHHhcCcEEee
Q 038416 170 LQKIARTARNLGIIVIA 186 (387)
Q Consensus 170 ~~~l~~~~~~~~~~li~ 186 (387)
+..|..+++++++.+|+
T Consensus 177 L~~L~~lak~~~~tVI~ 193 (356)
T 3hr8_A 177 LRKIAGSVNKSKAVVIF 193 (356)
T ss_dssp HHHHHHHHHTSSCEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 45566778888876654
No 460
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=22.02 E-value=3.3e+02 Score=22.28 Aligned_cols=98 Identities=9% Similarity=-0.112 Sum_probs=46.5
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccC--CCceeeeeccCCCCCccCChhhHHHhhcc--
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSN--NNLEARHYDLLPEKRWEVDLDGVEALADE-- 147 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 147 (387)
...+++|.++..-=..+.+.|.+.|.+|++..-.-........ ... .+..+..+..+. -+.+.+++.++.
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHhcC
Confidence 3456666655544455666677889888775433322222221 001 133444444332 245666665543
Q ss_pred CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+...++.+......+ .-.+.+++++..+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 334444333222111 1345666665554
No 461
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.00 E-value=97 Score=21.38 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=34.3
Q ss_pred cCChhhHHHhhcc-CceEEEEeCCCCCccccCCH-HHHHHHHHHHHhcCcEE-eeccccc
Q 038416 135 EVDLDGVEALADE-NTVAIVIINPGNPCGNVFSY-QHLQKIARTARNLGIIV-IADEVYN 191 (387)
Q Consensus 135 ~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~-~~~~~l~~~~~~~~~~l-i~D~~~~ 191 (387)
..+++.|.+.+.. +...+++--|-|.-|..-+. +..++.++..++.++++ .+||-++
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3467788887755 67788888886655554221 22444444333326655 6888765
No 462
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=21.80 E-value=3.4e+02 Score=23.01 Aligned_cols=54 Identities=11% Similarity=-0.004 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEE---cCChHHHHHHHHHhhcCCCCeEEEcCCCCcc
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYL---TLGCSQAIEISLSVLARPGANILIPRPGYPL 109 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~ 109 (387)
.+=|+.+.+...+.-+ +.-.|+. ++++.+++..+-.+-.-.-|.|++..|.|..
T Consensus 56 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 112 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQ---RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFP 112 (300)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 3445555555544211 1113443 3456666666655543223889988888853
No 463
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=21.70 E-value=3.3e+02 Score=23.66 Aligned_cols=97 Identities=21% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCCCEEEcCChHHHHHHHHHhhcCCC--CeEEEc--CCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc
Q 038416 72 SPEDVYLTLGCSQAIEISLSVLARPG--ANILIP--RPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD 146 (387)
Q Consensus 72 ~~~~i~~~~g~~~a~~~~~~~l~~~g--~~vl~~--~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 146 (387)
....+++|.+.+.....+++...+.| -+|++. .|...+ +..+. +...|+++..+.-. .-.+ .+
T Consensus 140 ~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-rltA~eL~~~GI~vtlI~Ds-a~~~---------~M- 207 (338)
T 3a11_A 140 EDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-KITAKELASYGIPVIYVVDS-AARH---------YM- 207 (338)
T ss_dssp CTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-HHHHHHHHHTTCCEEEECGG-GTTT---------TG-
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-HHHHHHHHhCCCCEEEEehH-HHHH---------HH-
Confidence 34566776554433334444444444 466664 465555 22222 22578887766421 1111 11
Q ss_pred cCceEEEEe------CC--CCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 147 ENTVAIVII------NP--GNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 147 ~~~~~v~l~------~p--~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
.....|++- |. -|..|+. .++-+|+.+|+++++=
T Consensus 208 ~~Vd~VivGAd~V~anG~v~NKiGT~-------~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 208 KMTDKVVMGADSITVNGAVINKIGTA-------LIALTAKEHRVWTMIA 249 (338)
T ss_dssp GGCSEEEECCSEECTTSCEEEETTHH-------HHHHHHHHTTCEEEEE
T ss_pred HhCCEEEECccEEecCCCEeecccHH-------HHHHHHHHcCCCEEEe
Confidence 223333322 11 2445543 5677788999988764
No 464
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=21.60 E-value=3.3e+02 Score=22.24 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=47.9
Q ss_pred CEEEcCChHHHHHHHHHhhcCC--CCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEE
Q 038416 75 DVYLTLGCSQAIEISLSVLARP--GANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAI 152 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 152 (387)
.|++|.++...=..++..|++. |.+|.+..-.-..... +. ..+.+++..++ .|.+.+.++++ +...|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~--~~~~~~~~~D~-------~d~~~l~~~~~-~~d~v 70 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LA--DQGVEVRHGDY-------NQPESLQKAFA-GVSKL 70 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HH--HTTCEEEECCT-------TCHHHHHHHTT-TCSEE
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hh--hcCCeEEEecc-------CCHHHHHHHHh-cCCEE
Confidence 3666655433334555566665 7666543222112221 12 23444433322 26778888776 45666
Q ss_pred EEeCCCCCccccCCHHHHHHHHHHHHhcCc
Q 038416 153 VIINPGNPCGNVFSYQHLQKIARTARNLGI 182 (387)
Q Consensus 153 ~l~~p~nptG~~~~~~~~~~l~~~~~~~~~ 182 (387)
+.+...++. ......-...+++.|++.++
T Consensus 71 i~~a~~~~~-~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 71 LFISGPHYD-NTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp EECCCCCSC-HHHHHHHHHHHHHHHHHTTC
T ss_pred EEcCCCCcC-chHHHHHHHHHHHHHHHcCC
Confidence 655443221 10112345678888888775
No 465
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=21.59 E-value=3.7e+02 Score=22.76 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhcCCCCCC-CCCEEEcC---ChHHHHHHHHHhhcCCC-CeEEEcCCCCcc
Q 038416 53 PSARRGIADYLNRDLPYKLS-PEDVYLTL---GCSQAIEISLSVLARPG-ANILIPRPGYPL 109 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~-~~~i~~~~---g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~ 109 (387)
.+=|+.+.+...+.-+ + .-.|+... ++.+++..+-++- +-| |.+++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~---g~rvpviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~~ 116 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCK---GTKVKVLAGAGSNATHEAVGLAKFAK-EHGADGILSVAPYYNK 116 (301)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEEECCCSSHHHHHHHHHHHH-HTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCCeEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEcCCCCCC
Confidence 3445555555544211 1 22455433 3455555554443 344 889888888863
No 466
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=21.55 E-value=3.3e+02 Score=22.15 Aligned_cols=95 Identities=9% Similarity=-0.066 Sum_probs=48.0
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEc-CCCCcchH---HHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIP-RPGYPLYE---IHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~-~p~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++. ...-.... .... ..+.++..+..+.. |.++++++++.
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE--KLGVKVLVVKANVG-----QPAKIKEMFQQIDE 78 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--TTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--hcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 45666555554455666777889887764 33322222 2223 44556666655422 55665554432
Q ss_pred ---CceEEEEeCCCCCcc--ccCCHHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCG--NVFSYQHLQKIART 176 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG--~~~~~~~~~~l~~~ 176 (387)
+..+++.+......+ .-.+.+++++..++
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 234444333222222 23566666666553
No 467
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.52 E-value=3.2e+02 Score=22.05 Aligned_cols=94 Identities=24% Similarity=0.136 Sum_probs=46.7
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCc-chHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc------
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGYP-LYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE------ 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..-.-. .....+. ..+.++..+..+. -|.++++++++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA--RHGVKAVHHPADL-----SDVAQIEALFALAEREFG 78 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH--TTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH--hcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcC
Confidence 4666665554445666667778888776533221 1122223 3455555555432 255666655532
Q ss_pred CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 148 NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
+..+++.+....+.+. ..+.++++++.+
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3455544333222221 245666665544
No 468
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=21.48 E-value=1.4e+02 Score=20.64 Aligned_cols=43 Identities=9% Similarity=-0.019 Sum_probs=27.1
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEeec
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIAD 187 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~D 187 (387)
.++..++++.+ .++|++.+- .++...+++..+|+.++++++.-
T Consensus 24 ~~~v~kai~~gka~lViiA~D-------~~~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLTED-------ASSNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETT-------SCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhHHHHhcCceeEEEEecc-------ccccchhhhcccccccCCCeeee
Confidence 35566666554 455555432 23345788888999999876543
No 469
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.47 E-value=1.5e+02 Score=21.72 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=23.3
Q ss_pred hhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 139 DGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 139 ~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
+.+..++. .+..+++++.... +.+++ .++|+++|++++.
T Consensus 64 ~~~l~a~~~~~~~~iIlt~g~~------~~~~i---~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 64 DLLLTALEMPNVRCLILTGNLE------PVQLV---LTKAEERGVPVIL 103 (139)
T ss_dssp HHHHHHTTCTTEEEEEEETTCC------CCHHH---HHHHHHHTCCEEE
T ss_pred HHHHHHHhCCCCcEEEEcCCCC------CCHHH---HHHHHHCCCeEEE
Confidence 34445565 6778888765433 22444 4566688988764
No 470
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=21.41 E-value=2.3e+02 Score=24.10 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=36.6
Q ss_pred CCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc---CcEEee
Q 038416 132 KRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL---GIIVIA 186 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~---~~~li~ 186 (387)
.+..+|.+.+++.++ .+...++++. ++-=+..++.+|.+++++.+.+. +++||+
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVGG-STGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECe-eccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345799998888653 4566665543 33344568999999999887653 567764
No 471
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=21.40 E-value=3.8e+02 Score=22.79 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEcC---ChHHHHHHHHHhhcCCC-CeEEEcCCCCcc
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLTL---GCSQAIEISLSVLARPG-ANILIPRPGYPL 109 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~---g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~ 109 (387)
.+=|+.+.+...+.-+ ..-.|+... ++.+++..+-.+- +.| |.+++..|.|..
T Consensus 64 ~eEr~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~A~-~~Gadavlv~~P~y~~ 120 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQAE-KLGANGVLVVTPYYNK 120 (306)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHHHH-hcCCCEEEECCCCCCC
Confidence 3345555555543211 122455543 3456665555443 234 889888888853
No 472
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=21.39 E-value=59 Score=33.44 Aligned_cols=28 Identities=29% Similarity=0.439 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|++.|+-||.|-++....
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 5899999999999999999999987543
No 473
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=21.26 E-value=3.4e+02 Score=22.26 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=20.6
Q ss_pred CCCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 73 PEDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
...+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34566666655545566667778888877653
No 474
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=21.13 E-value=3.3e+02 Score=22.04 Aligned_cols=126 Identities=9% Similarity=0.045 Sum_probs=54.2
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCEEEcCChHHHHHHHHHhhcCCC--CeEEEcCCCCcchHHHhh---ccCCCceee
Q 038416 50 LGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPG--ANILIPRPGYPLYEIHAA---GSNNNLEAR 124 (387)
Q Consensus 50 ~~~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--~~vl~~~p~~~~~~~~~~---~~~~g~~~~ 124 (387)
.+..+..+.+.+++......++++++|+++.=+..+..+...++..+. ..++......+....... ....+.++.
T Consensus 108 ~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~Pvl 187 (246)
T 4f21_A 108 EGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGKITSINKGLPIL 187 (246)
T ss_dssp C-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHSTTCCGGGTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccccccccccccCCchh
Confidence 345555666666554432335678888875433333333333333332 344443332222222211 001122222
Q ss_pred eeccCCCCCccCChhhHH---Hhhcc-CceEEEEeCCCCCccccCCHHHHHHHHHHHHh
Q 038416 125 HYDLLPEKRWEVDLDGVE---ALADE-NTVAIVIINPGNPCGNVFSYQHLQKIARTARN 179 (387)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~---~~~~~-~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~ 179 (387)
.+- ...+..+..+.-+ +.++. +..+-+..-|. .|-.+++++++.+.++.++
T Consensus 188 ~~H--G~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g--~gH~i~~~~l~~~~~fL~k 242 (246)
T 4f21_A 188 VCH--GTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVG--MQHSVCMEEIKDISNFIAK 242 (246)
T ss_dssp EEE--ETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESS--CCSSCCHHHHHHHHHHHHH
T ss_pred hcc--cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC--CCCccCHHHHHHHHHHHHH
Confidence 221 2233345554333 23332 22333333232 2334678889888888765
No 475
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=21.10 E-value=3.3e+02 Score=21.91 Aligned_cols=94 Identities=14% Similarity=0.016 Sum_probs=47.4
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCC-cch---HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc---
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGANILIPRPGY-PLY---EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE--- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 147 (387)
.+++|.++..-=..+.+.|.+.|.+|++..... ... ..... ..+.++..+..+.. |.++++++++.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK--AKGVDSFAIQANVA-----DADEVKAMIKEVVS 78 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 466666655555566667778898886643222 111 12223 34556666655322 55665554432
Q ss_pred ---CceEEEEeCCCCCcc--ccCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNPCG--NVFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~nptG--~~~~~~~~~~l~~ 175 (387)
+...++.+....+.+ .-.+.+++++..+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444333322222 2346666666655
No 476
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.09 E-value=3.1e+02 Score=21.73 Aligned_cols=94 Identities=6% Similarity=-0.099 Sum_probs=45.7
Q ss_pred CEEEcCChHHHHHHHHHhhcCCC--CeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 75 DVYLTLGCSQAIEISLSVLARPG--ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g--~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
.+++|.++...=..+++.|.+.| .+|++..-.-........ ..+.++..+..+.. |.++++++++.
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~--~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS--IKDSRVHVLPLTVT-----CDKSLDTFVSKVGEIV 77 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT--CCCTTEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh--ccCCceEEEEeecC-----CHHHHHHHHHHHHHhc
Confidence 46666655544456666777788 777765433322233322 22334455544322 45555554431
Q ss_pred ---CceEEEEeCCCCC-ccc--cCCHHHHHHHHH
Q 038416 148 ---NTVAIVIINPGNP-CGN--VFSYQHLQKIAR 175 (387)
Q Consensus 148 ---~~~~v~l~~p~np-tG~--~~~~~~~~~l~~ 175 (387)
+...++.+..... .+. ..+.+++++..+
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 4455554433222 222 235566655554
No 477
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=20.81 E-value=2.4e+02 Score=22.25 Aligned_cols=58 Identities=2% Similarity=0.017 Sum_probs=38.4
Q ss_pred HHHhhccCCCceeeeeccCCCCCccCChhhHHHhhc-cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Q 038416 111 EIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALAD-ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLG 181 (387)
Q Consensus 111 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~ 181 (387)
...++ ..|.+++++.. .++++++.+++. .++.+|.++.-..+ +...++++++.+++.+
T Consensus 109 a~~l~--~~G~~v~~LG~------~vp~~~l~~~~~~~~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 109 AMMLE--SGGFTVYNLGV------DIEPGKFVEAVKKYQPDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHH--HTTCEEEECCS------SBCHHHHHHHHHHHCCSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred HHHHH--HCCCEEEECCC------CCCHHHHHHHHHHcCCCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 34455 78999887653 357888877664 46777776654322 2366888888887754
No 478
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=20.75 E-value=3.6e+02 Score=22.64 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEcC---ChHHHHHHHHHhhcCCC-CeEEEcCCCCc
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLTL---GCSQAIEISLSVLARPG-ANILIPRPGYP 108 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~---g~~~a~~~~~~~l~~~g-~~vl~~~p~~~ 108 (387)
.+=|+.+.+...+.-+ +.-.|+... ++.+++..+-++- +.| |.+++..|.|.
T Consensus 52 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAE-DVGADAVLSITPYYN 107 (289)
T ss_dssp HHHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHH-HHTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 3445555555543211 122355443 3455555555443 334 88888888875
No 479
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=20.70 E-value=1.5e+02 Score=25.48 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEc---CChHHHHHHHHHhhcCCC-CeEEEcCCCCcc
Q 038416 53 PSARRGIADYLNRDLPYKLSPEDVYLT---LGCSQAIEISLSVLARPG-ANILIPRPGYPL 109 (387)
Q Consensus 53 ~~lr~~ia~~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~~l~~~g-~~vl~~~p~~~~ 109 (387)
.+=|+.+.+...+.-+ +.-.|+.. +++.+++..+-.+- +-| |.|++..|.|..
T Consensus 74 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~-~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 74 HEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAE-KAGADAVLVVTPYYNR 130 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHH-HTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCCC
Confidence 3445555555543211 12245543 33555665554443 334 888888888753
No 480
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=20.68 E-value=2.4e+02 Score=24.47 Aligned_cols=68 Identities=6% Similarity=0.079 Sum_probs=33.7
Q ss_pred CcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 107 YPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|..+.+.+. .....++.+-.+.. .-.+...++++.+ +-|++.-|-. .+.++.++|.+.|++.|+.+.+
T Consensus 56 ~~~~~~ll~--~~~vD~V~i~tp~~----~H~~~~~~al~aG-khV~~EKPla-----~~~~e~~~l~~~a~~~g~~~~v 123 (352)
T 3kux_A 56 VSDPQMLFN--DPSIDLIVIPTPND----THFPLAQSALAAG-KHVVVDKPFT-----VTLSQANALKEHADDAGLLLSV 123 (352)
T ss_dssp ESCHHHHHH--CSSCCEEEECSCTT----THHHHHHHHHHTT-CEEEECSSCC-----SCHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCHHHHhc--CCCCCEEEEeCChH----HHHHHHHHHHHCC-CcEEEECCCc-----CCHHHHHHHHHHHHHcCCeEEE
Confidence 445555555 54555555544221 1233344444433 3333333321 3456667777777777666555
No 481
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=20.67 E-value=41 Score=29.90 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccccCCCCCccccccCCCccEEEEecCcccccccccceEEEEe
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVFGSIVPVITLGSISKRWIVPGWRLGWLVT 234 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~sK~~~~~g~r~G~i~~ 234 (387)
.+++++|.++|+++|+-+++|=.-..|..-|..+..+ ++-|.+|+.|+|+=+-+.
T Consensus 49 ~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl-------------~~~~~lGi~glRLD~Gf~ 103 (372)
T 2p0o_A 49 RQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDEL-------------EPLIELGVTGLRMDYGIT 103 (372)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBC-------------HHHHHHTCCEEEECSSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHH-------------HHHHHcCCCEEEEcCCCC
Confidence 3779999999999999999997766544322211111 233555888888766554
No 482
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=20.64 E-value=55 Score=28.43 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhcCcEEeeccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEV 189 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~ 189 (387)
.+.+.+++++|.++|+.+|+|--
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46789999999999999999854
No 483
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=20.60 E-value=3.7e+02 Score=22.29 Aligned_cols=98 Identities=15% Similarity=-0.007 Sum_probs=48.2
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhcc-----
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALADE----- 147 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 147 (387)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ....+.++..+..+.. |.++++++++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-----DEALHEALVELAVRRF 83 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 345666555544455666777889888876543322222222 0034555655554322 45555554431
Q ss_pred -CceEEEEeCCCC-Cccc--cCCHHHHHHHHHH
Q 038416 148 -NTVAIVIINPGN-PCGN--VFSYQHLQKIART 176 (387)
Q Consensus 148 -~~~~v~l~~p~n-ptG~--~~~~~~~~~l~~~ 176 (387)
+..+++.+.... +.+. ..+.+++++..++
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 334444332211 2222 3566777666553
No 484
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=20.58 E-value=1.9e+02 Score=24.88 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=36.7
Q ss_pred CCccCChhhHHHhhc----cCceEEEEeCCCCCccccCCHHHHHHHHHHHHhc--CcEEee
Q 038416 132 KRWEVDLDGVEALAD----ENTVAIVIINPGNPCGNVFSYQHLQKIARTARNL--GIIVIA 186 (387)
Q Consensus 132 ~~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~--~~~li~ 186 (387)
.+..+|.+.+++.++ .+...++++. ++-=+..++.+|.+++++.+.+. +++||+
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLG-ILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEEST-GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCc-cCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 345799998888653 4566665443 33334568999999999987764 466665
No 485
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=20.55 E-value=4.1e+02 Score=22.79 Aligned_cols=105 Identities=9% Similarity=-0.044 Sum_probs=51.4
Q ss_pred CCCEEEcCChHHHHHHHHHhhcC--CCCeEEEcCCCCcc----------hHHHhhccCCCceeeeeccCCCCCccCChhh
Q 038416 73 PEDVYLTLGCSQAIEISLSVLAR--PGANILIPRPGYPL----------YEIHAAGSNNNLEARHYDLLPEKRWEVDLDG 140 (387)
Q Consensus 73 ~~~i~~~~g~~~a~~~~~~~l~~--~g~~vl~~~p~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 140 (387)
...|++|.++...=..++..|++ .|.+|++..-.-.. ...... ..+.++..+..+ -.|.+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D-----l~d~~~ 82 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN--LIGFKGEVIAAD-----INNPLD 82 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG--GTTCCSEEEECC-----TTCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh--ccccCceEEECC-----CCCHHH
Confidence 34677776654444555566666 78777765321110 001111 222233333332 125677
Q ss_pred HHHhhccCceEEEEeCCCCCccccCCHHH--------HHHHHHHHHhcCcEEe
Q 038416 141 VEALADENTVAIVIINPGNPCGNVFSYQH--------LQKIARTARNLGIIVI 185 (387)
Q Consensus 141 l~~~~~~~~~~v~l~~p~nptG~~~~~~~--------~~~l~~~~~~~~~~li 185 (387)
++++...+..+|+.+....... .-..++ ...+.+.|++.++.+|
T Consensus 83 ~~~~~~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 83 LRRLEKLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp HHHHTTSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred HHHhhccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 7776334566666554422111 111122 3467888888877644
No 486
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=20.47 E-value=3.3e+02 Score=22.36 Aligned_cols=31 Identities=19% Similarity=0.100 Sum_probs=19.7
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+...|.+.|.+|++..
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4566666655545556666778887777643
No 487
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=20.41 E-value=2.3e+02 Score=24.26 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=42.8
Q ss_pred CcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 107 YPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
|.++.+.+. .....++.+-++.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++++++|+.+.+
T Consensus 55 ~~~~~~ll~--~~~vD~V~i~tp~~----~H~~~~~~al~~G-khVl~EKP~a-----~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 55 YGSYEELAK--DPNVEVAYVGTQHP----QHKAAVMLCLAAG-KAVLCEKPMG-----VNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp ESSHHHHHH--CTTCCEEEECCCGG----GHHHHHHHHHHTT-CEEEEESSSS-----SSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhc--CCCCCEEEECCCcH----HHHHHHHHHHhcC-CEEEEECCCC-----CCHHHHHHHHHHHHHhCCEEEE
Confidence 556777777 66677776655322 1234444455533 4455555532 4567888888888888877765
Q ss_pred ccc
Q 038416 187 DEV 189 (387)
Q Consensus 187 D~~ 189 (387)
--.
T Consensus 123 ~~~ 125 (334)
T 3ohs_X 123 AIW 125 (334)
T ss_dssp ECG
T ss_pred EEh
Confidence 433
No 488
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=20.40 E-value=87 Score=23.26 Aligned_cols=58 Identities=24% Similarity=0.263 Sum_probs=37.1
Q ss_pred cCChhhHHHhhcc-CceEEEEeCCCCCccccCCHHH-HHHHHHHHH-hcCcEE-eecccccc
Q 038416 135 EVDLDGVEALADE-NTVAIVIINPGNPCGNVFSYQH-LQKIARTAR-NLGIIV-IADEVYNH 192 (387)
Q Consensus 135 ~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~-~~~l~~~~~-~~~~~l-i~D~~~~~ 192 (387)
..+++.|.+.+.. +...+++--|-|.-|..-+..+ .+++++..+ +.++++ .+||-++.
T Consensus 39 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 39 TPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp EECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred chHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 4578888888765 6777888888766665533222 445554332 356644 78988874
No 489
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.37 E-value=68 Score=28.17 Aligned_cols=26 Identities=4% Similarity=0.134 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHhcCcEEeeccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYN 191 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~ 191 (387)
..+.+++++++|.++|+++|+|--..
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 45789999999999999999986543
No 490
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.32 E-value=68 Score=30.50 Aligned_cols=29 Identities=31% Similarity=0.500 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+-||.|-++....
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 57999999999999999999999887644
No 491
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=20.32 E-value=1.6e+02 Score=22.24 Aligned_cols=95 Identities=14% Similarity=0.065 Sum_probs=53.0
Q ss_pred HHHHHHHHhhcCC--CCeEEEcCCCCcchHHHhhccC-CCceeeeeccCCCCCccCChhhHHHhhccCceEEEEeCCCCC
Q 038416 84 QAIEISLSVLARP--GANILIPRPGYPLYEIHAAGSN-NNLEARHYDLLPEKRWEVDLDGVEALADENTVAIVIINPGNP 160 (387)
Q Consensus 84 ~a~~~~~~~l~~~--g~~vl~~~p~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 160 (387)
..+..+++.+.+- |-+++.+. +....++ . .|+++..+.-.++.+ + .++.+.+..+..-+++..| .|
T Consensus 24 ~~~v~~ak~~~~ll~Gf~l~AT~----gTa~~L~--e~~Gl~v~~v~k~~eGG---~-p~I~d~I~~geIdlVInt~-~p 92 (152)
T 1b93_A 24 QMLMSWVERHQPLLEQHVLYATG----TTGNLIS--RATGMNVNAMLSGPMGG---D-QQVGALISEGKIDVLIFFW-DP 92 (152)
T ss_dssp HHHHHHHHHTHHHHTTSEEEEET----THHHHHH--HHHCCCCEEECCGGGTH---H-HHHHHHHHTTCCCEEEEEC-CT
T ss_pred HHHHHHHHHHHHHhCCCEEEEcc----HHHHHHH--HHhCceeEEEEecCCCC---C-chHHHHHHCCCccEEEEcC-Cc
Confidence 3333444444333 55555544 2334444 4 677766553212211 2 3566666655444444444 34
Q ss_pred ccccCC-HHHHHHHHHHHHhcCcEEeecccc
Q 038416 161 CGNVFS-YQHLQKIARTARNLGIIVIADEVY 190 (387)
Q Consensus 161 tG~~~~-~~~~~~l~~~~~~~~~~li~D~~~ 190 (387)
.| ..+ ..+...|.+.|-.|+++++.--.-
T Consensus 93 l~-~~~h~~D~~~IrR~A~~~~IP~~T~lat 122 (152)
T 1b93_A 93 LN-AVPHDPDVKALLRLATVWNIPVATNVAT 122 (152)
T ss_dssp TS-CCTTHHHHHHHHHHHHHTTCCEESSHHH
T ss_pred cc-CCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 45 344 788999999999999998865433
No 492
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=20.28 E-value=1.4e+02 Score=20.59 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=26.7
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.++..++++.+ .++|++.+-. ++...+.+..+|+.++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA~D~-------~~~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSSDA-------GIHTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETTS-------CHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeCCC-------CHHHHHHHHHHHHHcCCCEEE
Confidence 35566666544 4555554432 234578888899999998764
No 493
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.24 E-value=3.3e+02 Score=22.09 Aligned_cols=31 Identities=16% Similarity=0.001 Sum_probs=19.5
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~ 52 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNY 52 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 3566666554444556666777887777643
No 494
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.21 E-value=76 Score=30.06 Aligned_cols=29 Identities=14% Similarity=0.327 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 166 SYQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
+.++++++++.|++.|+-||.|-++....
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 45899999999999999999998887543
No 495
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=20.18 E-value=2.7e+02 Score=22.20 Aligned_cols=96 Identities=9% Similarity=-0.031 Sum_probs=43.0
Q ss_pred CEEEcCChHHHHHHHHHhhcCCCC-------eEEEcCCCCcchHHHhh-ccCCCceeeeeccCCCCCccCChhhHHHhhc
Q 038416 75 DVYLTLGCSQAIEISLSVLARPGA-------NILIPRPGYPLYEIHAA-GSNNNLEARHYDLLPEKRWEVDLDGVEALAD 146 (387)
Q Consensus 75 ~i~~~~g~~~a~~~~~~~l~~~g~-------~vl~~~p~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 146 (387)
.+++|.++...=..+...|.+.|. +|++..-.-........ ....+.++..+..+.. |.++++++++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 78 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADIS-----DMADVRRLTT 78 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTT-----SHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCC-----CHHHHHHHHH
Confidence 355665544434455555666675 67664432222221111 0023545555554322 4556555543
Q ss_pred c------CceEEEEeCCCCCccc--cCCHHHHHHHHH
Q 038416 147 E------NTVAIVIINPGNPCGN--VFSYQHLQKIAR 175 (387)
Q Consensus 147 ~------~~~~v~l~~p~nptG~--~~~~~~~~~l~~ 175 (387)
. +...++.+....+.+. -.+.+++.+..+
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 2 3455554433222221 235555655554
No 496
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=20.18 E-value=2.5e+02 Score=23.34 Aligned_cols=31 Identities=13% Similarity=0.054 Sum_probs=19.4
Q ss_pred CCEEEcCChHHHHHHHHHhhcCCCCeEEEcC
Q 038416 74 EDVYLTLGCSQAIEISLSVLARPGANILIPR 104 (387)
Q Consensus 74 ~~i~~~~g~~~a~~~~~~~l~~~g~~vl~~~ 104 (387)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~ 54 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHY 54 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEe
Confidence 3466666555444556666777887777654
No 497
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.14 E-value=2.2e+02 Score=24.02 Aligned_cols=75 Identities=11% Similarity=0.082 Sum_probs=39.4
Q ss_pred CCCeEEEcCCCCcchHHHhhccCCCceeeeeccCCCCCccCChhhHHHh---hccCceEEEEeCCCCCccccCCHHHHHH
Q 038416 96 PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPEKRWEVDLDGVEAL---ADENTVAIVIINPGNPCGNVFSYQHLQK 172 (387)
Q Consensus 96 ~g~~vl~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~v~l~~p~nptG~~~~~~~~~~ 172 (387)
++..+++..+.| ..+++ .+|++...+... ..+..+++..|.+. ++.+...+++..++.+. .-.+.
T Consensus 178 ~~~~~v~~H~af---~Yf~~--~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~------~~~~~ 245 (286)
T 3gi1_A 178 RSKTFVTQHTAF---SYLAK--RFGLKQLGISGI-SPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP------KIAHA 245 (286)
T ss_dssp SCCEEEEEESCC---HHHHH--HTTCEEEEEECS-CC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT------HHHHH
T ss_pred CCCEEEEECCch---HHHHH--HCCCeEeecccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh------HHHHH
Confidence 467788877665 34667 889887765421 22234555555554 34333334455555322 11232
Q ss_pred HHHHHHhcCcEEe
Q 038416 173 IARTARNLGIIVI 185 (387)
Q Consensus 173 l~~~~~~~~~~li 185 (387)
++++.|+.++
T Consensus 246 ---la~~~g~~v~ 255 (286)
T 3gi1_A 246 ---IAKSTGAKVK 255 (286)
T ss_dssp ---HHHTTTCEEE
T ss_pred ---HHHHhCCeEE
Confidence 3557777664
No 498
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.11 E-value=1.4e+02 Score=20.38 Aligned_cols=42 Identities=17% Similarity=0.060 Sum_probs=27.1
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEee
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIA 186 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li~ 186 (387)
.++..++++.+ .++|++.+- .|++-.+++..+|+.++++++.
T Consensus 20 ~~~v~kai~~gka~lViiA~D-------~~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKN-------APKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECC-------CCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCccEEEEeCC-------CCHHHHHHHHHHHHHcCCCEEE
Confidence 35556666544 455554332 2446688999999999998643
No 499
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.11 E-value=1.6e+02 Score=20.64 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=25.9
Q ss_pred hhhHHHhhccC-ceEEEEeCCCCCccccCCHHHHHHHHHHHHhcCcEEe
Q 038416 138 LDGVEALADEN-TVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVI 185 (387)
Q Consensus 138 ~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~~~~l~~~~~~~~~~li 185 (387)
.++..++++.+ .++|++.+ + .|++-.+.+..+|++++++++
T Consensus 26 ~~~v~kai~~gka~lViiA~--D-----~~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAG--N-----IPKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECT--T-----CBHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEeC--C-----CCHHHHHHHHHHHHHcCCCEE
Confidence 35556666544 44444422 2 255668889999999998854
No 500
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=20.08 E-value=77 Score=29.91 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCcEEeecccccccc
Q 038416 167 YQHLQKIARTARNLGIIVIADEVYNHLA 194 (387)
Q Consensus 167 ~~~~~~l~~~~~~~~~~li~D~~~~~~~ 194 (387)
.++++++++.|+++|+-||.|-++....
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 5899999999999999999999887543
Done!