BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038422
(634 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 148/274 (54%), Gaps = 9/274 (3%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTAFY 420
+LG G FG YK +++G VKR K+ G E FQ ++ + H NLL L F
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
E+LL+Y ++ NGS+A L Q P LDW R +I G +G+AYLH+ I
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISK 535
I H +K++N+LLD FE ++ D+ L L++ + H + + +PEY GK S+
Sbjct: 156 I-HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 536 KSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRTGDVFDKEMKGAKY 595
K+DV+ G+++LEL+TG+ + D L +WV ++KEK+ + D +++G Y
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG-NY 273
Query: 596 SKSEMINLLKIGLSCCEEDVLARMELKEVIEKIE 629
E+ L+++ L C + + R ++ EV+ +E
Sbjct: 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 148/274 (54%), Gaps = 9/274 (3%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTAFY 420
+LG G FG YK +++G VKR K+ G E FQ ++ + H NLL L F
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
E+LL+Y ++ NGS+A L Q P LDW R +I G +G+AYLH+ I
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL-----MVAYKSPEYAHNGKISK 535
I H +K++N+LLD FE ++ D+ L L++ + H + + +PEY GK S+
Sbjct: 164 I-HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 536 KSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRTGDVFDKEMKGAKY 595
K+DV+ G+++LEL+TG+ + D L +WV ++KEK+ + D +++G Y
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG-NY 281
Query: 596 SKSEMINLLKIGLSCCEEDVLARMELKEVIEKIE 629
E+ L+++ L C + + R ++ EV+ +E
Sbjct: 282 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
++G G FG YK V+ +G +KR ++ G E+F+ I+ L HP+L+ L F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+ E +L+Y+++ENG+L L+ + + W+ RL+I G +G+ YLH I
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLHTR----AI 160
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMV-----AYKSPEYAHNGKISK 535
H +KS N+LLD +F P +TD+ + + D H V Y PEY G++++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 536 KSDVWSLGILILELLTGK 553
KSDV+S G+++ E+L +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
++G G FG YK V+ +G +KR ++ G E+F+ I+ L HP+L+ L F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+ E +L+Y+++ENG+L L+ + + W+ RL+I G +G+ YLH I
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLHTR----AI 160
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMV-----AYKSPEYAHNGKISK 535
H +KS N+LLD +F P +TD+ + + H V Y PEY G++++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 536 KSDVWSLGILILELLTGK 553
KSDV+S G+++ E+L +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 20/201 (9%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED----FQEHIKRLGRLEHPNLLPLTA 418
+G G FG YK ++N VK+ M ++ E+ F + IK + + +H NL+ L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F ++ L+Y ++ NGSL +L P L W R KI +G G+ +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEYAHNG 531
H +KS+N+LLD +F ++D+ L + A T+M AY +PE A G
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGL-ARASEKFAQTVMXXRIVGTTAYMAPE-ALRG 209
Query: 532 KISKKSDVWSLGILILELLTG 552
+I+ KSD++S G+++LE++TG
Sbjct: 210 EITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 20/201 (9%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED----FQEHIKRLGRLEHPNLLPLTA 418
+G G FG YK ++N VK+ M ++ E+ F + IK + + +H NL+ L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F ++ L+Y ++ NGSL +L P L W R KI +G G+ +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEYAHNG 531
H +KS+N+LLD +F ++D+ L + A T+M AY +PE A G
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGL-ARASEKFAQTVMXSRIVGTTAYMAPE-ALRG 209
Query: 532 KISKKSDVWSLGILILELLTG 552
+I+ KSD++S G+++LE++TG
Sbjct: 210 EITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED----FQEHIKRLGRLEHPNLLPLTA 418
+G G FG YK ++N VK+ M ++ E+ F + IK + + +H NL+ L
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F ++ L+Y ++ NGSL +L P L W R KI +G G+ +LH
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEYAHNG 531
H +KS+N+LLD +F ++D+ L + A +M AY +PE A G
Sbjct: 149 ---IHRDIKSANILLDEAFTAKISDFGL-ARASEKFAQXVMXXRIVGTTAYMAPE-ALRG 203
Query: 532 KISKKSDVWSLGILILELLTG 552
+I+ KSD++S G+++LE++TG
Sbjct: 204 EITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 364 GSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED----FQEHIKRLGRLEHPNLLPLTAF 419
G G FG YK ++N VK+ M ++ E+ F + IK + +H NL+ L F
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
++ L+Y + NGSL +L P L W R KI +G G+ +LH
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSC--LDGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL-------MVAYKSPEYAHNGK 532
H +KS+N+LLD +F ++D+ L + A + AY +PE A G+
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGL-ARASEKFAQXVXXSRIVGTTAYXAPE-ALRGE 201
Query: 533 ISKKSDVWSLGILILELLTG 552
I+ KSD++S G+++LE++TG
Sbjct: 202 ITPKSDIYSFGVVLLEIITG 221
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGR--EDFQEHIKRLGRLEHPNLLPLT 417
E++G G FG Y+ I + A R+ ++ + E+ ++ K L+HPN++ L
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
++ L+ EF G L L ++W + + +GM YLH+E
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE-- 124
Query: 478 GSIIP--HGHLKSSNVLLDRSFEP--------LLTDYALRPLINPDNAHTLMVAYK--SP 525
+I+P H LKSSN+L+ + E +TD+ L + + AY +P
Sbjct: 125 -AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAP 183
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGKYP 555
E SK SDVWS G+L+ ELLTG+ P
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLPLTAF 419
E +G+G+FG ++ V +Q + R +F + + RL HPN++
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ ++ E++ GSL LH + +++ LD + RL + V KGM YLHN P
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--------YKSPEYAHNG 531
I H +LKS N+L+D+ + + D+ L L A T + + + +PE +
Sbjct: 160 -IVHRNLKSPNLLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
++KSDV+S G+++ EL T + P
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLPLTAF 419
E +G+G+FG ++ V +Q + R +F + + RL HPN++
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ ++ E++ GSL LH + +++ LD + RL + V KGM YLHN P
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKISK 535
I H LKS N+L+D+ + + D+ L L + A + +PE + ++
Sbjct: 160 -IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 536 KSDVWSLGILILELLTGKYP 555
KSDV+S G+++ EL T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 360 AEVLGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
EVLG G FG + K T G+ V+K + + + F + +K + LEHPN+L
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
Y+ + + E+++ G+L G + + + Q P W R+ K + GMAYLH+
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS-QYP---WSQRVSFAKDIASGMAYLHS---- 126
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDY--------------ALRPLINPDNAHTLMVA--- 521
I H L S N L+ + ++ D+ LR L PD V
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 522 -YKSPEYAHNGKISKKSDVWSLGILILELL 550
+ +PE + +K DV+S GI++ E++
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K K+ ++ +DF E + + +L HP L+ L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L++EF+E+G L+ L QR +T L + V +GMAYL + +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE----ACVI 145
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 206 DVWSFGVLMWEVFSEGKIP 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K ++ + EDF E + + +L HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L++EF+E+G L+ L QR +T L + V +GMAYL + +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE----ACVI 125
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K ++ + EDF E + + +L HP L+ L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L++EF+E+G L+ L QR +T L + V +GMAYL + +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE----ACVI 123
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 184 DVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K ++ + EDF E + + +L HP L+ L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L++EF+E+G L+ L QR +T L + V +GMAYL + +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE----ACVI 128
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 189 DVWSFGVLMWEVFSEGKIP 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K ++ + EDF E + + +L HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L++EF+E+G L+ L QR +T L + V +GMAYL S+I
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ASVI- 125
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + N +K ++ + EDF E + + +L HP L+ L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ L+ EF+E+G L+ L QR +T L + V +GMAYL + +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE----ACVI 126
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + ++D+ + + D + V + SPE + S KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 538 DVWSLGILILELLT-GKYP 555
DVWS G+L+ E+ + GK P
Sbjct: 187 DVWSFGVLMWEVFSEGKIP 205
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG ++ T + G + K + +E ++ I+ + L HP L+ L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ E +++YEF+ G L K+ H K + ++ ++ V KG+ ++H +
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHE----N 274
Query: 480 IIPHGHLKSSNVLL--DRSFEPLLTDYALRPLINPDNA---HTLMVAYKSPEYAHNGKIS 534
H LK N++ RS E L D+ L ++P + T + +PE A +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 535 KKSDVWSLGILILELLTGKYP 555
+D+WS+G+L LL+G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQM--NNVGREDFQ---EHIKRLGRLEHPNLL 414
+VLGSG FG +K V I G++ + ++ + GR+ FQ +H+ +G L+H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQ-RPGLDWQTRLKIIKGVVKGMAYLH 473
L +L+ +++ GSL +H +Q R L Q L + KGM YL
Sbjct: 97 RLLGLCPGSSLQLVT-QYLPLGSLL-----DHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------EY 527
G + H +L + NVLL + + D+ + L+ PD+ L K+P E
Sbjct: 151 EH--GMV--HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
H GK + +SDVWS G+ + EL+T
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQM--NNVGREDFQ---EHIKRLGRLEHPNLL 414
+VLGSG FG +K V I G++ + ++ + GR+ FQ +H+ +G L+H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQ-RPGLDWQTRLKIIKGVVKGMAYLH 473
L +L+ +++ GSL +H +Q R L Q L + KGM YL
Sbjct: 79 RLLGLCPGSSLQLVT-QYLPLGSLL-----DHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------EY 527
G + H +L + NVLL + + D+ + L+ PD+ L K+P E
Sbjct: 133 EH--GMV--HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
H GK + +SDVWS G+ + EL+T
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LGSG FG K GQ V + + ++ ++F + + + +L HP L+ +
Sbjct: 16 LGSGQFGVV-KLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + H K GL+ L++ V +GMA+L +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRS-HGK---GLEPSQLLEMCYDVCEGMAFLESHQ----FI 126
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDN-----AHTLMVAYKSPEYAHNGKISKKS 537
H L + N L+DR ++D+ + + D V + +PE H K S KS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 538 DVWSLGILILELLT-GKYPEN 557
DVW+ GIL+ E+ + GK P +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG ++ T + G + K + +E ++ I+ + L HP L+ L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ E +++YEF+ G L K+ H K + ++ ++ V KG+ ++H +
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHE----N 168
Query: 480 IIPHGHLKSSNVLL--DRSFEPLLTDYALRPLINPDNA---HTLMVAYKSPEYAHNGKIS 534
H LK N++ RS E L D+ L ++P + T + +PE A +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 535 KKSDVWSLGILILELLTGKYP 555
+D+WS+G+L LL+G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG + +N VK K + + F E + L+H L+ L A R
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQR--PGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L ++ + P L + + +GMAY+ + +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NY 131
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
I H L+++NVL+ S + D+ L +I DN +T + + +PE + G +
Sbjct: 132 I-HRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ E++T GK P
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIP 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L R +++ E++ENGSL L H Q
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ---FT 149
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++GV GM YL + G + H L + NVL+D + ++D+ L ++ +P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSD--LGYV--HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
D A+T + + + +PE S SDVWS G+++ E+L G+ P
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 136
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 137 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 119
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 120 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMV---AYKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + A+ +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L R +++ E++ENGSL L H Q
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ---FT 149
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++GV GM YL + G + H L + NVL+D + ++D+ L ++ +P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSD--LGYV--HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
D A T + + + +PE S SDVWS G+++ E+L G+ P
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 78 LKLEQMNLSGTIAAESLGLLSSLRAVSFMNNKFEGP-LPDLRK--MGPLKSIYLSDNGFS 134
L L SG + L +SL + +N F GP LP+L + L+ +YL +NGF+
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 135 GNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE--IKQN 192
G I + L L+++ N L+GTIPSSL L KL +L+L N +G++P+ +
Sbjct: 405 GKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 463
Query: 193 EMRSLGLANNELEGPIPESLSK 214
+ +L L N+L G IP LS
Sbjct: 464 TLETLILDFNDLTGEIPSGLSN 485
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 85 LSGTIAAESLGLLSSLRAVSFMNNKFEGPLP-DLRKMGPLKSIYLSDNGFSGNISDDAFE 143
LSGTI + SLG LS LR + N EG +P +L + L+++ L N +G I
Sbjct: 427 LSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS-GLS 484
Query: 144 GMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRS---LGLA 200
T+L + ++NNRLTG IP + +L L L+L N F G +P + + RS L L
Sbjct: 485 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLN 543
Query: 201 NNELEGPIPESLSK 214
N G IP ++ K
Sbjct: 544 TNLFNGTIPAAMFK 557
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 80 LEQMNLSGTIAA----ESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSI-YLS--DNG 132
L+ +++SG + ++ + L+ ++ +N+F GP+P L PLKS+ YLS +N
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL----PLKSLQYLSLAENK 277
Query: 133 FSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE---I 189
F+G I D +L L ++ N G +P L L L +N F G++P +
Sbjct: 278 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 190 KQNEMRSLGLANNELEGPIPESLSKMDPSTFA---GNKNLCGPPLDPCVLPKHPEIPNNV 246
K ++ L L+ NE G +PESL+ + S + N GP +LP + P N
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP-----ILPNLCQNPKNT 392
Query: 247 SQ 248
Q
Sbjct: 393 LQ 394
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 98/262 (37%), Gaps = 81/262 (30%)
Query: 49 VNWNAL-RNPCTFNYPNWNGVLCLNGSVWGLKLEQMNLSGTIAAESLGLLSSLRAVSFMN 107
+NW +L N T P W G L ++ LKL + SG I AE LG SL +
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRL---ENLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNT 544
Query: 108 NKFEGPLPD--LRKMGPLKS--------IYLSDNG-------------FSG--------- 135
N F G +P ++ G + + +Y+ ++G F G
Sbjct: 545 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 604
Query: 136 ------NISDDAFEGMTS--------LKKLYMANNRLTGTIPSSLVQLPKLMELRLEANK 181
NI+ + G TS + L M+ N L+G IP + +P L L L N
Sbjct: 605 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 664
Query: 182 FQGQVPEIKQNEMRSLG---------------------------LANNELEGPIPE--SL 212
G +P+ + ++R L L+NN L GPIPE
Sbjct: 665 ISGSIPD-EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 723
Query: 213 SKMDPSTFAGNKNLCGPPLDPC 234
P+ F N LCG PL C
Sbjct: 724 ETFPPAKFLNNPGLCGYPLPRC 745
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 84 NLSGTIAAESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFE 143
N+ G + ++ G L+ ++ NK G + D+ + L+ + +S N FS I F
Sbjct: 164 NVVGWVLSDGCG---ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGI---PFL 216
Query: 144 G-MTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSLGLANN 202
G ++L+ L ++ N+L+G ++ +L L + +N+F G +P + ++ L LA N
Sbjct: 217 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAEN 276
Query: 203 ELEGPIPESLS 213
+ G IP+ LS
Sbjct: 277 KFTGEIPDFLS 287
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 34 LLQFKSSLNDSSSALVNWNALRNPCTFNYPNWNGVLCLNGSVWGLKLEQMNLS-GTIAAE 92
L+ FK L D + L +W++ +NPCTF +GV C + V + L L+ G A
Sbjct: 14 LISFKDVLPDKN-LLPDWSSNKNPCTF-----DGVTCRDDKVTSIDLSSKPLNVGFSAVS 67
Query: 93 SLGLLSSLRAVSFMNNK-FEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTS-LKK 150
S L + F++N G + + L S+ LS N SG ++ G S LK
Sbjct: 68 SSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 127
Query: 151 LYMANNRLT--GTIPSSLVQLPKLMELRLEANKFQGQ-----VPEIKQNEMRSLGLANNE 203
L +++N L G + L +L L L L AN G V E++ L ++ N+
Sbjct: 128 LNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 186
Query: 204 LEGPI 208
+ G +
Sbjct: 187 ISGDV 191
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 78 LKLEQMNLSGTIAAESLGLLSSLRAVSFMNNKFEGP-LPDLRK--MGPLKSIYLSDNGFS 134
L L SG + L +SL + +N F GP LP+L + L+ +YL +NGF+
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 135 GNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE--IKQN 192
G I + L L+++ N L+GTIPSSL L KL +L+L N +G++P+ +
Sbjct: 408 GKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 193 EMRSLGLANNELEGPIPESLSK 214
+ +L L N+L G IP LS
Sbjct: 467 TLETLILDFNDLTGEIPSGLSN 488
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 85 LSGTIAAESLGLLSSLRAVSFMNNKFEGPLP-DLRKMGPLKSIYLSDNGFSGNISDDAFE 143
LSGTI + SLG LS LR + N EG +P +L + L+++ L N +G I
Sbjct: 430 LSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS-GLS 487
Query: 144 GMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRS---LGLA 200
T+L + ++NNRLTG IP + +L L L+L N F G +P + + RS L L
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLN 546
Query: 201 NNELEGPIPESLSK 214
N G IP ++ K
Sbjct: 547 TNLFNGTIPAAMFK 560
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 80 LEQMNLSGTIAA----ESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSI-YLS--DNG 132
L+ +++SG + ++ + L+ ++ +N+F GP+P L PLKS+ YLS +N
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL----PLKSLQYLSLAENK 280
Query: 133 FSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE---I 189
F+G I D +L L ++ N G +P L L L +N F G++P +
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 190 KQNEMRSLGLANNELEGPIPESLSKMDPSTFA---GNKNLCGPPLDPCVLPKHPEIPNNV 246
K ++ L L+ NE G +PESL+ + S + N GP +LP + P N
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP-----ILPNLCQNPKNT 395
Query: 247 SQ 248
Q
Sbjct: 396 LQ 397
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 98/262 (37%), Gaps = 81/262 (30%)
Query: 49 VNWNAL-RNPCTFNYPNWNGVLCLNGSVWGLKLEQMNLSGTIAAESLGLLSSLRAVSFMN 107
+NW +L N T P W G L ++ LKL + SG I AE LG SL +
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRL---ENLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNT 547
Query: 108 NKFEGPLPD--LRKMGPLKS--------IYLSDNG-------------FSG--------- 135
N F G +P ++ G + + +Y+ ++G F G
Sbjct: 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607
Query: 136 ------NISDDAFEGMTS--------LKKLYMANNRLTGTIPSSLVQLPKLMELRLEANK 181
NI+ + G TS + L M+ N L+G IP + +P L L L N
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 182 FQGQVPEIKQNEMRSLG---------------------------LANNELEGPIPE--SL 212
G +P+ + ++R L L+NN L GPIPE
Sbjct: 668 ISGSIPD-EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726
Query: 213 SKMDPSTFAGNKNLCGPPLDPC 234
P+ F N LCG PL C
Sbjct: 727 ETFPPAKFLNNPGLCGYPLPRC 748
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 84 NLSGTIAAESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFE 143
N+ G + ++ G L+ ++ NK G + D+ + L+ + +S N FS I F
Sbjct: 167 NVVGWVLSDGCG---ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGI---PFL 219
Query: 144 G-MTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSLGLANN 202
G ++L+ L ++ N+L+G ++ +L L + +N+F G +P + ++ L LA N
Sbjct: 220 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAEN 279
Query: 203 ELEGPIPESLS 213
+ G IP+ LS
Sbjct: 280 KFTGEIPDFLS 290
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 34 LLQFKSSLNDSSSALVNWNALRNPCTFNYPNWNGVLCLNGSVWGLKLEQMNLS-GTIAAE 92
L+ FK L D + L +W++ +NPCTF +GV C + V + L L+ G A
Sbjct: 17 LISFKDVLPDKN-LLPDWSSNKNPCTF-----DGVTCRDDKVTSIDLSSKPLNVGFSAVS 70
Query: 93 SLGLLSSLRAVSFMNNK-FEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTS-LKK 150
S L + F++N G + + L S+ LS N SG ++ G S LK
Sbjct: 71 SSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130
Query: 151 LYMANNRLT--GTIPSSLVQLPKLMELRLEANKFQGQ-----VPEIKQNEMRSLGLANNE 203
L +++N L G + L +L L L L AN G V E++ L ++ N+
Sbjct: 131 LNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 189
Query: 204 LEGPI 208
+ G +
Sbjct: 190 ISGDV 194
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG + +N VK K + + F E + L+H L+ L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQR--PGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ EF+ GSL L ++ + P L + + +GMAY+ + +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NY 130
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
I H L+++NVL+ S + D+ L +I DN +T + + +PE + G +
Sbjct: 131 I-HRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KS+VWS GIL+ E++T GK P
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIP 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 362 VLGSGTFGASYKTVI-SNGQAYVVKR--YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+G+G++G K S+G+ V K Y M ++ + L L+HPN++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 419 FYYRKEEK-----LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+Y R ++ ++ E+ E G LA + TK+R LD + L+++ + + H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 474 NELPGS-IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYA 528
G + H LK +NV LD L D+ L ++N D + Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 529 HNGKISKKSDVWSLGILILEL 549
+ ++KSD+WSLG L+ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GFV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 73 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 125
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H +L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 126 YI-HRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 362 VLGSGTFGASYKTVI-SNGQAYVVKR--YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+G+G++G K S+G+ V K Y M ++ + L L+HPN++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 419 FYYRKEEK-----LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+Y R ++ ++ E+ E G LA + TK+R LD + L+++ + + H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 474 NELPGS-IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYA 528
G + H LK +NV LD L D+ L ++N D + Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 529 HNGKISKKSDVWSLGILILEL 549
+ ++KSD+WSLG L+ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 146
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 147 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E +ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G++ H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GAV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E +ENGSL L H Q +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ 119
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 120 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 72 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 125 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 130 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 343 VRDDMEPFDLQDMLRASAE--------------VLGSGTFG----ASYKTVISNGQAYVV 384
VR ++PF +D +A E V+G G FG K +
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 385 KRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLH 443
K K + R DF +G+ +HPN++ L + + +++ E++ENGSL L
Sbjct: 63 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
Query: 444 ANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTD 503
N + + +++G+ GM YL + S + H L + N+L++ + ++D
Sbjct: 123 KNDGR----FTVIQLVGMLRGIGSGMKYLSDM---SAV-HRDLAARNILVNSNLVCKVSD 174
Query: 504 YALRPLI--NPDNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ + ++ +P+ A+T + + + +PE K + SDVWS GI++ E+++ G+ P
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L R + +++ EF+ENG+L L H Q +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR-KHDGQFTVIQ 146
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L +I +P
Sbjct: 147 L---VGMLRGIAAGMRYLADM--GYV--HRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +T + V + +PE K + SDVWS GI++ E+++ G+ P
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 135
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 136 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 82 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 134
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 135 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 87 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 139
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN +T + + +PE + G
Sbjct: 140 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG + + VK K ++ E F + L+H L+ L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPG---LDWQTRLKIIKGVVKGMAYLHNELPGS 479
KE ++ EF+ GSL L ++ ++P +D+ + + +GMA++ +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR---N 131
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ S + D+ L +I DN +T + + +PE + G
Sbjct: 132 YI-HRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL++E++T G+ P
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 128
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 129 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 128
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 129 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L N +
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FT 108
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + S + H L + N+L++ + ++D+ + ++ +P
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDM---SYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 164
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + +PE K + SDVWS GI++ E+++ G+ P
Sbjct: 165 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 342 FVRDDMEPF--DLQDMLRASAEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDF 398
F +DD E DL++ +G G+FGA Y + N + +K+ E +
Sbjct: 47 FFKDDPEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 98
Query: 399 QEHIKR---LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
Q+ IK L +L HPN + Y R+ L+ E+ A L H K ++
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEI 156
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
+ G ++G+AYLH+ ++I H +K+ N+LL L D+ ++ P N
Sbjct: 157 AA---VTHGALQGLAYLHSH---NMI-HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 209
Query: 516 HTLMVAYKSPEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE G+ K DVWSLGI +EL K P
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L N +
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FT 114
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + S + H L + N+L++ + ++D+ + ++ +P
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDM---SYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 170
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + +PE K + SDVWS GI++ E+++ G+ P
Sbjct: 171 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 86 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 138
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 139 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIP 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 362 VLGSGTFGASYKTVI-SNGQAYVVKR--YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+G+G++G K S+G+ V K Y M ++ + L L+HPN++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 419 FYYRKEEK-----LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+Y R ++ ++ E+ E G LA + TK+R LD + L+++ + + H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 474 NELPGS-IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYA 528
G + H LK +NV LD L D+ L ++N D Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 529 HNGKISKKSDVWSLGILILEL 549
+ ++KSD+WSLG L+ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 79 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 131
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 132 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 130 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 78 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 130
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 131 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 361 EVLGSGTFG---ASYKTVISNGQAYV-VKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLP 415
+V+G+G FG + + + + +V +K K R DF +G+ +HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L + +++ EF+ENGSL L N D Q + + G+++G+A
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQN--------DGQFTVIQLVGMLRGIAAGMKY 124
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH---------TLMVAYKSPE 526
L H L + N+L++ + ++D+ L + D + + + + +PE
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 527 YAHNGKISKKSDVWSLGILILELLT-GKYP 555
K + SDVWS GI++ E+++ G+ P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 130 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 342 FVRDDMEPF--DLQDMLRASAEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDF 398
F +DD E DL++ +G G+FGA Y + N + +K+ E +
Sbjct: 8 FFKDDPEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 399 QEHIKR---LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
Q+ IK L +L HPN + Y R+ L+ E+ A L H K ++
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEI 117
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
+ G ++G+AYLH+ ++I H +K+ N+LL L D+ ++ P N
Sbjct: 118 AA---VTHGALQGLAYLHSH---NMI-HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170
Query: 516 HTLMVAYKSPEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE G+ K DVWSLGI +EL K P
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 361 EVLGSGTFG---ASYKTVISNGQAYV-VKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLP 415
+V+G+G FG + + + + +V +K K R DF +G+ +HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L + +++ EF+ENGSL L N D Q + + G+++G+A
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQN--------DGQFTVIQLVGMLRGIAAGMKY 150
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH---------TLMVAYKSPE 526
L H L + N+L++ + ++D+ L + D + + + + +PE
Sbjct: 151 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 527 YAHNGKISKKSDVWSLGILILELLT-GKYP 555
K + SDVWS GI++ E+++ G+ P
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 135
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 136 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E LG+G FG + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 85 V-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---N 137
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ + + D+ L LI DN T + + +PE + G
Sbjct: 138 YI-HRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL+ E++T G+ P
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E +ENGSL L H Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ 148
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 149 ---LVGMLRGIASGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + SPE K + SDVWS GI++ E+++ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 30 DTEILLQFKSSLNDSSSALVNWNALRNPCTFNYPNWNGVLCLNGSVWGLKLEQMNLSGTI 89
D + LLQ K L + ++ L +W + C W GVLC + ++ ++LSG
Sbjct: 7 DKQALLQIKKDLGNPTT-LSSWLPTTDCCNRT---WLGVLC-DTDTQTYRVNNLDLSGLN 61
Query: 90 AAESLGLLSSLRAVSFMN-------NKFEGPLP-DLRKMGPLKSIYLSDNGFSGNISDDA 141
+ + SSL + ++N N GP+P + K+ L +Y++ SG I D
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-F 120
Query: 142 FEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR---SLG 198
+ +L L + N L+GT+P S+ LP L+ + + N+ G +P+ + + S+
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 199 LANNELEGPIPESLSKMD 216
++ N L G IP + + ++
Sbjct: 181 ISRNRLTGKIPPTFANLN 198
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 147 SLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSLGLANNELEG 206
+L L + NNR+ GT+P L QL L L + N G++P+
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ------------------ 286
Query: 207 PIPESLSKMDPSTFAGNKNLCGPPLDPCV 235
+L + D S +A NK LCG PL C
Sbjct: 287 --GGNLQRFDVSAYANNKCLCGSPLPACT 313
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 350 FDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
+D D+L E LGSG FG ++ V + G+ +V K + + + I + +L
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
HP L+ L + K E +L+ EF+ G L ++ A K + ++ +G
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA----EVINYMRQACEG 161
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLD--RSFEPLLTDYALRPLINPDN---AHTLMVAYK 523
+ ++H SI+ H +K N++ + ++ + D+ L +NPD T +
Sbjct: 162 LKHMHEH---SIV-HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 524 SPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSN 571
+PE + +D+W++G+L LL+G P G D +L N
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLETLQN 261
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 359 SAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGREDFQEHIKRLGRLEHP 411
+ E LGSG F K S G Y K K+ V RED + + L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
N++ L Y K + +L+ E V G L L ++ L + + +K ++ G+ Y
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 472 LHNELPGSIIPHGHLKSSNV-LLDRSF-EPL--LTDYALRPLINPDNAHTLMVA---YKS 524
LH+ I H LK N+ LLDR+ +P + D+ L I+ N + + +
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
PE + + ++D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRY--KQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
+G G+FG A +G+ YV+K +M++ RE+ + + L ++HPN++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHT---KQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+ ++ ++ E G L +++A ++ LDW ++ + + ++H+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALKHVHDRK 145
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD----NAHTLMVAYKSPEYAHNGK 532
I H +KS N+ L + L D+ + ++N A Y SPE N
Sbjct: 146 ----ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 533 ISKKSDVWSLGILILELLTGKY 554
+ KSD+W+LG ++ EL T K+
Sbjct: 202 YNNKSDIWALGCVLYELCTLKH 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 362 VLGSGTFGASYKT-VISNGQAYVVKRY--KQMNNVGR-EDFQEHIKRLGRLEHPNLLPLT 417
+LG G+F Y+ I G +K K M G + Q +K +L+HP++L L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
++ L+ E NG + L + +P + + R + ++ GM YLH+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLK---NRVKPFSENEAR-HFMHQIITGMLYLHSH-- 131
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN-PDNAHTLMVA---YKSPEYAHNGKI 533
I H L SN+LL R+ + D+ L + P H + Y SPE A
Sbjct: 132 --GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 534 SKKSDVWSLGILILELLTGKYP 555
+SDVWSLG + LL G+ P
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPP 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 361 EVLGSGTFGASYKTVI--SNGQAYVVKRYKQM----NNVGREDFQEHIKRLGRLEHPNLL 414
+V+G+G FG YK ++ S+G+ V K + R DF +G+ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG-LDWQTRLKIIKGVVKGMAYLH 473
L + + +++ E++ENG+L L +++ G + +++G+ GM YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL-----REKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT-----LMVAYKSPE 526
N H L + N+L++ + ++D+ L ++ +P+ +T + + + +PE
Sbjct: 165 N----MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 527 YAHNGKISKKSDVWSLGILILELLT-GKYP 555
K + SDVWS GI++ E++T G+ P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGR 407
D+ ++ R S ++ LG+G FG + NG V + + + E F E + + +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSPESFLEEAQIMKK 60
Query: 408 LEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
L+H L+ L A +E ++ E++ GSL L + L + + V
Sbjct: 61 LKHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGR---ALKLPNLVDMAAQVAA 116
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVA 521
GMAY+ E I H L+S+N+L+ + D+ L LI DN T +
Sbjct: 117 GMAYI--ERMNYI--HRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIK 171
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE A G+ + KSDVWS GIL+ EL+T G+ P
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG + + VK K ++ E F + L+H L+ L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPG---LDWQTRLKIIKGVVKGMAYLHNELPGS 479
KE ++ EF+ GSL L ++ ++P +D+ + + +GMA++ +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR---N 304
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKI 533
I H L+++N+L+ S + D+ L +I DN +T + + +PE + G
Sbjct: 305 YI-HRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 534 SKKSDVWSLGILILELLT-GKYP 555
+ KSDVWS GIL++E++T G+ P
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R DF +G+ +HPN++ L + + +++ E++ENGSL L N +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ----FT 122
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NP 512
+ +++G+ GM YL + G + H L + N+L++ + ++D+ L ++ +P
Sbjct: 123 VIQLVGMLRGISAGMKYLSDM--GYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 513 DNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ A+T + + + +PE K + SDVWS GI++ E+++ G+ P
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 26/229 (11%)
Query: 338 GKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNN 392
G ++F +D +P ++ + LG G FG+ Y + N G+ VK+ +
Sbjct: 1 GAMAF--EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 393 VGREDFQEHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQ 449
DF+ I+ L L+H N++ Y R+ KL++ E++ GSL L K
Sbjct: 59 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KH 113
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
+ +D L+ + KGM YL + H L + N+L++ + D+ L +
Sbjct: 114 KERIDHIKLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKV 169
Query: 510 INPDNAHTLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ D + + + +PE K S SDVWS G+++ EL T
Sbjct: 170 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ + LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ E++ GSL L A+ + +D
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAER----IDHI 117
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 118 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 24/229 (10%)
Query: 338 GKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNN 392
G + +D +P ++ + LG G FG+ Y + N G+ VK+ +
Sbjct: 24 GAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 83
Query: 393 VGREDFQEHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQ 449
DF+ I+ L L+H N++ Y R+ KL++ E++ GSL L K
Sbjct: 84 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KH 138
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
+ +D L+ + KGM YL + H L + N+L++ + D+ L +
Sbjct: 139 KERIDHIKLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKV 194
Query: 510 INPDNAHTLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ D + + + +PE K S SDVWS G+++ EL T
Sbjct: 195 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 362 VLGSGTFGASYKTVISN-GQAYVVKRYKQMNN--VGREDFQEHIKRLGRLEHPNLLPLTA 418
++G G++G K + G+ +K++ + ++ + ++ IK L +L H NL+ L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 419 FYYRKEEKLLLYEFVENGSLAG-KLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+K+ L++EFV++ L +L N GLD+Q K + ++ G+ + H+
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH-- 143
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPE-YAHNGK 532
+II H +K N+L+ +S L D+ R L P + VA Y++PE + K
Sbjct: 144 -NII-HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 533 ISKKSDVWSLGILILELLTGK 553
K DVW++G L+ E+ G+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGE 222
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + N+ E F + + + +L H L+ L A
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 301
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP 382
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ EF+ GSL L K + +D
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSLREYLQ----KHKERIDHI 117
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 118 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G GT+G YK S G+ +KR + + + +E I L L HPN++ L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGL-DWQTRLKIIKGVVKGMAYLHNEL 476
+ + L++EF+E L L N T GL D Q ++ + + +++G+A+ H
Sbjct: 86 DVIHSERCLTLVFEFMEK-DLKKVLDENKT----GLQDSQIKIYLYQ-LLRGVAHCHQHR 139
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEYAHNGK 532
I H LK N+L++ L D+ L R P ++T V Y++P+ K
Sbjct: 140 ----ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 533 -ISKKSDVWSLGILILELLTGK 553
S D+WS+G + E++TGK
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ + LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ E++ GSL L K + +D
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHI 117
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 118 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G GT+G YK S G+ +KR + + + +E I L L HPN++ L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGL-DWQTRLKIIKGVVKGMAYLHNEL 476
+ + L++EF+E L L N T GL D Q ++ + + +++G+A+ H
Sbjct: 86 DVIHSERCLTLVFEFMEK-DLKKVLDENKT----GLQDSQIKIYLYQ-LLRGVAHCHQHR 139
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEYAHNGK 532
I H LK N+L++ L D+ L R P ++T V Y++P+ K
Sbjct: 140 ----ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 533 -ISKKSDVWSLGILILELLTGK 553
S D+WS+G + E++TGK
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ + LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 66
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ E++ GSL L K + +D
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHI 121
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 122 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 178 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ + LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 4 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 63
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ E++ GSL L K + +D
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHI 118
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 119 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 175 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQ 399
+D +P ++ + LG G FG+ Y + N G+ VK+ + DF+
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 64
Query: 400 EHIKRLGRLEHPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
I+ L L+H N++ Y R+ KL++ E++ GSL L K + +D
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHI 119
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
L+ + KGM YL + H L + N+L++ + D+ L ++ D
Sbjct: 120 KLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 517 TLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + + +PE K S SDVWS G+++ EL T
Sbjct: 176 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER----MN 127
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 125
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LHA+ TK + + + I +
Sbjct: 61 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIAR 115
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 116 QTARGMDYLHAK---SII-HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + S +SDV++ GI++ EL+TG+ P
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 123
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 363 LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG G F SY ++ +G Y +KR RE+ Q HPN+L L A+
Sbjct: 37 LGEGGF--SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 420 YYR----KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
R K E LL F + G+L ++ K + Q L ++ G+ +G+ +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI-LWLLLGICRGLEAIH-- 151
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDY------------ALRPLINPD-NAHTLMVAY 522
H LK +N+LL +P+L D + + L D A ++Y
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 523 KSPE---YAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKA 567
++PE + I +++DVWSLG ++ ++ G+ P + + Q DS A
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 43/222 (19%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTA 418
E++G G +GA YK + V K + R++F +++I R+ +EH N+
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAV----KVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 419 FYYR-----KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
R + E LL+ E+ NGSL L + HT DW + ++ V +G+AYLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTS-----DWVSSCRLAHSVTRGLAYLH 128
Query: 474 NELPGS-----IIPHGHLKSSNVLLDRSFEPLLTDYAL------RPLINP---DNAHTLM 519
ELP I H L S NVL+ +++D+ L L+ P DNA
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 520 VA---YKSPEYAHNGKIS--------KKSDVWSLGILILELL 550
V Y +PE G ++ K+ D+++LG++ E+
Sbjct: 189 VGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 79 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H +L + N+L++ + D+ L ++ D + + + + +PE
Sbjct: 134 KR----YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER----MN 131
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER----MN 300
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER----MN 124
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN T + + +PE A G+ +
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER----MN 300
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + ++ H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 338 GKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVIS-NGQAYVVKRYKQMN----- 391
G +F ++D+E D +M E LGSG F K G+ Y K K+
Sbjct: 1 GMSTFRQEDVE--DHYEM----GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR 54
Query: 392 -NVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQR 450
V RE+ + + L + HPN++ L + K + +L+ E V G L L ++
Sbjct: 55 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEK 109
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSF---EPLLTDYAL 506
L + +K ++ G+ YLH++ I H LK N+ LLD++ L D+ +
Sbjct: 110 ESLTEDEATQFLKQILDGVHYLHSKR----IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 507 RPLINPDNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
I N + + +PE + + ++D+WS+G++ LL+G P
Sbjct: 166 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L ++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+E ++ E++ GSL L K L + + + GMAY+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVER----MNYV 385
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKISKK 536
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ + K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 537 SDVWSLGILILELLT-GKYP 555
SDVWS GIL+ EL T G+ P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ G L L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGCLL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N+ Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
SK SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER----MN 300
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LHA+ TK + + + I +
Sbjct: 73 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIAR 127
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + +H
Sbjct: 128 QTARGMDYLHAK---SII-HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + S +SDV++ GI++ EL+TG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ G L L K + P L + + + GMAY+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER----MN 134
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN +T + + +PE A G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 133 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG + NG V + + + E F + + + +L H L+ L A
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTK--QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ GSL L K + P L + + + GMAY+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER----MN 131
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKSPEYAHNGKIS 534
H L+++N+L+ + + D+ L LI DN T + + +PE A G+ +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 535 KKSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ EL T G+ P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 361 EVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLLP 415
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 416 LTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH- 147
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEYA 528
G I H LK N+LL+ +TD+ +++P+ NA Y SPE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 529 HNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 76 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 131 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 133 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 27/237 (11%)
Query: 363 LGSGTFGASYKTVIS-NGQAYVVKRY-KQMNNVGREDFQEHIKRLGRLE-HPNLLPLTAF 419
LG G+F K V + QA+ VK K+M + Q+ I L E HPN++ L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLHEV 74
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
++ + L+ E + G L ++ K++ I++ +V ++++H+
Sbjct: 75 FHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAVSHMHD----V 125
Query: 480 IIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDN----AHTLMVAYKSPEYAHNGK 532
+ H LK N+L + + E + D+ L PDN + Y +PE +
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 533 ISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRTGDVFDKE 589
+ D+WSLG+++ +L+G+ P Q +D + ++ V M K K+ F+ E
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVP----FQSHDRSLTCTSAVEIMKKIKKGDFSFEGE 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 77 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 132 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 151 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 151 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 363 LGSGTFGA----SYKTVISN-GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
LG G FG+ Y + N G+ VK+ + DF+ I+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 418 AFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
Y R+ KL++ E++ GSL L K + +D L+ + KGM YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + N+L++ + D+ L ++ D + + + +PE
Sbjct: 133 KR----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K S SDVWS G+++ EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
ME F Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 METFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ HPN++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG+FG YK A + + + F+ + L + H N+L L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
K+ ++ ++ E SL LH TK + I + +GM YLH I
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLH----AKNII 154
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPL---------INPDNAHTLMVAYKSPEYAHNGKI 533
H +KS+N+ L + D+ L + + L +A + N
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 534 SKKSDVWSLGILILELLTGKYPENYL 559
S +SDV+S GI++ EL+TG+ P +++
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLP 415
EV+G+G FG K +K K R +F +G+ EHPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L ++L EF+ENG+L L N D Q + + G+++G+A
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLN--------DGQFTVIQLVGMLRGIASGMRY 133
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI-----NPDNAHTLM----VAYKSPE 526
L H L + N+L++ + ++D+ L + +P +L + + +PE
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 527 YAHNGKISKKSDVWSLGILILELLT-GKYP 555
K + SD WS GI++ E+++ G+ P
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLP 415
EV+G+G FG K +K K R +F +G+ EHPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L ++L EF+ENG+L L N D Q + + G+++G+A
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLN--------DGQFTVIQLVGMLRGIASGMRY 131
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI---NPDNAHT------LMVAYKSPE 526
L H L + N+L++ + ++D+ L + + D +T + + + +PE
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT-GKYP 555
K + SD WS GI++ E+++ G+ P
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 89/213 (41%), Gaps = 31/213 (14%)
Query: 363 LGSGTFGASYKTVISNGQA----YVVK-------RYKQMNNVGREDFQEHIKR----LGR 407
LGSG +G NG + V+K RY +N E F E I L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD-DNKNIEKFHEEIYNEISLLKS 102
Query: 408 LEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
L+HPN++ L + K+ L+ EF E G L ++ H D I+K ++
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAANIMKQILS 157
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL---LTDYALRPLINPDNA--HTLMVAY 522
G+ YLH I H +K N+LL+ L + D+ L + D L AY
Sbjct: 158 GICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
K ++K DVWS G+++ LL G YP
Sbjct: 214 YIAPEVLKKKYNEKCDVWSCGVIMYILLCG-YP 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
MEPF Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ H N++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYKQMN------NVGREDFQEHIKRLGRLEHPN 412
E LGSG F K G+ Y K K+ V RE+ + + L + HPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L + K + +L+ E V G L L ++ L + +K ++ G+ YL
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 124
Query: 473 HNELPGSIIPHGHLKSSNV-LLDRSF---EPLLTDYALRPLINPDNAHTLMVA---YKSP 525
H++ I H LK N+ LLD++ L D+ + I N + + +P
Sbjct: 125 HSKR----IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGKYP 555
E + + ++D+WS+G++ LL+G P
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
MEPF Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ H N++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F + ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 94 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 148 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMN------NVGREDFQEHIKRLGRLEHPN 412
E LGSG F K G+ Y K K+ V RE+ + + L + HPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L + K + +L+ E V G L L ++ L + +K ++ G+ YL
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 145
Query: 473 HNELPGSIIPHGHLKSSNV-LLDRSF---EPLLTDYALRPLINPDNAHTLMVA---YKSP 525
H++ I H LK N+ LLD++ L D+ + I N + + +P
Sbjct: 146 HSKR----IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGKYP 555
E + + ++D+WS+G++ LL+G P
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
MEPF Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ H N++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
MEPF Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ H N++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 347 MEPFDLQDM--LRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNN------VGRED 397
MEPF Q + E LGSG F K S G Y K K+ + V RE+
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ + L ++ H N++ L Y + + +L+ E V G L L Q+ L +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNV-LLDRSFEPL----LTDYALRPLINP 512
IK ++ G+ YLH + I H LK N+ LLD++ P+ L D+ L I
Sbjct: 117 ATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNI-PIPHIKLIDFGLAHEIED 171
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + + ++D+WS+G++ LL+G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 148
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R +++ D+ H L V +
Sbjct: 149 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 335 ADYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVG 394
D G + M+P +L L E +G G+FG +K + + Q V + +
Sbjct: 11 VDLGTENLYFQSMDPEELFTKL----EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE 66
Query: 395 REDF--QEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG 452
E Q+ I L + + P + Y + + ++ E++ GS L PG
Sbjct: 67 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPG 119
Query: 453 -LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN 511
LD I++ ++KG+ YLH+E H +K++NVLL E L D+ + +
Sbjct: 120 PLDETQIATILREILKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQLT 175
Query: 512 PD----NAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYL 559
N + +PE K+D+WSLGI +EL G+ P + L
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 91 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 142
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG + + VK K ++ E F + L+H L+ L A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPG---LDWQTRLKIIKGVVKGMAYLHNELPGS 479
KE ++ EF+ GSL L ++ ++P +D+ + + +GMA++ +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR---N 298
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGKISKKSDV 539
I H L+++N+L+ S + D+ L + + + +PE + G + KSDV
Sbjct: 299 YI-HRDLRAANILVSASLVCKIADFGLARV-----GAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 540 WSLGILILELLT-GKYP 555
WS GIL++E++T G+ P
Sbjct: 353 WSFGILLMEIVTYGRIP 369
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 97 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N+ Y SPE
Sbjct: 151 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 16 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 75 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 126
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 187 DIWAFGVLMWEIYSLGKMP 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 360 AEVLGSGTFGA---SYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPN 412
+ LG G+FG +Y T + GQ +K + + + D Q I+R L L HP+
Sbjct: 19 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L K+E +++ E+ AG ++ QR + Q + + ++ + Y
Sbjct: 76 IIKLYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGK 532
H I H LK N+LLD + D+ L ++ N L + SP YA
Sbjct: 130 HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEV 183
Query: 533 ISKK------SDVWSLGILILELLTGKYP 555
IS K DVWS G+++ +L + P
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 360 AEVLGSGTFGA---SYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPN 412
+ LG G+FG +Y T + GQ +K + + + D Q I+R L L HP+
Sbjct: 18 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L K+E +++ E+ AG ++ QR + Q + + ++ + Y
Sbjct: 75 IIKLYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGK 532
H I H LK N+LLD + D+ L ++ N L + SP YA
Sbjct: 129 HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEV 182
Query: 533 ISKK------SDVWSLGILILELLTGKYP 555
IS K DVWS G+++ +L + P
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 91 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 142
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 76 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 127
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E +G G G Y + ++ GQ +++ +E I + ++PN++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
Y +E ++ E++ GSL + +D + + ++ + +LH+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS----N 136
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA---YKSPEYAHNGKISK 535
+ H ++KS N+LL LTD+ I P+ + + MV + +PE
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
E LG+G G + + VK KQ ++ + F + +L+H L+ L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+E ++ E++ENGSL L T L L + + +GMA++ +
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLI-----NPDNAHTLMVAYKSPEYAHNGKISK 535
I H L+++N+L+ + + D+ L LI + + +PE + G +
Sbjct: 131 I-HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 536 KSDVWSLGILILELLT-GKYP 555
KSDVWS GIL+ E++T G+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 360 AEVLGSGTFGA---SYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPN 412
+ LG G+FG +Y T + GQ +K + + + D Q I+R L L HP+
Sbjct: 13 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L K+E +++ E+ AG ++ QR + Q + + ++ + Y
Sbjct: 70 IIKLYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGK 532
H I H LK N+LLD + D+ L ++ N L + SP YA
Sbjct: 124 HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEV 177
Query: 533 ISKK------SDVWSLGILILELLTGKYP 555
IS K DVWS G+++ +L + P
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 101 KLY-FCFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 155 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 93 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N+ Y SPE
Sbjct: 147 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 12 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 71 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 122
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 183 DIWAFGVLMWEIYSLGKMP 201
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 94 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 148 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 343 VRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEH- 401
V D+ P D +++ LG G FG YK N + V+ K ++ E+ +++
Sbjct: 29 VTRDLNPEDFWEIIGE----LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 402 --IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
I L +HPN++ L +Y + +L EF G++ + +RP + Q ++
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQV 139
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP----LINPDNA 515
+ K + + YLH+ + I H LK+ N+L + L D+ + I ++
Sbjct: 140 -VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 194
Query: 516 HTLMVAYKSPEY-----AHNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ +PE + + K+DVWSLGI ++E+ + P + L
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 343 VRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEH- 401
V D+ P D +++ LG G FG YK N + V+ K ++ E+ +++
Sbjct: 29 VTRDLNPEDFWEIIGE----LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 402 --IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
I L +HPN++ L +Y + +L EF G++ + +RP + Q ++
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQV 139
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP----LINPDNA 515
+ K + + YLH+ + I H LK+ N+L + L D+ + I ++
Sbjct: 140 -VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS 194
Query: 516 HTLMVAYKSPEY-----AHNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ +PE + + K+DVWSLGI ++E+ + P + L
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 23 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 82 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 133
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-----VAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + + V + PE K S KS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 194 DIWAFGVLMWEIYSLGKMP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 360 AEVLGSGTFGA---SYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPN 412
+ LG G+FG +Y T + GQ +K + + + D Q I+R L L HP+
Sbjct: 9 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ L K+E +++ E+ AG ++ QR + Q + + ++ + Y
Sbjct: 66 IIKLYDVIKSKDEIIMVIEY------AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGK 532
H I H LK N+LLD + D+ L ++ N L + SP YA
Sbjct: 120 HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEV 173
Query: 533 ISKK------SDVWSLGILILELLTGKYP 555
IS K DVWS G+++ +L + P
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 206
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 207 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 312
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 97 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 151 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 99 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 153 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y + ++ ++ E SL LHA+ TK + + + I +
Sbjct: 73 VLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIAR 127
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + +H
Sbjct: 128 QTARGMDYLHAK---SII-HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE + S +SDV++ GI++ EL+TG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 146
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 147 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 94 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 148 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 73 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 127 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 72 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 126 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E +G G G Y + ++ GQ +++ +E I + ++PN++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
Y +E ++ E++ GSL + +D + + ++ + +LH+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS----N 135
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA---YKSPEYAHNGKISK 535
+ H +KS N+LL LTD+ I P+ + + MV + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 71 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 125 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 362 VLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
VLG G+FG K V+ + + +E ++ L +L+HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
F+ K L+ E G L ++ + R +II+ V+ G+ Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK--- 144
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H LK N+LL+ + + D+ L + Y +PE H G
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 202
Query: 532 KISKKSDVWSLGILILELLTGKYPEN 557
+K DVWS G+++ LL+G P N
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 74 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 128 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E +G G G Y + ++ GQ +++ +E I + ++PN++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
Y +E ++ E++ GSL + +D + + ++ + +LH+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS----N 136
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA---YKSPEYAHNGKISK 535
+ H +KS N+LL LTD+ I P+ + + MV + +PE
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG+G FG K GQ V + + ++ ++F E K + L H L+ L +
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ E++ NG L L + R Q L++ K V + M YL ++
Sbjct: 76 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FL 127
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNGKISKKS 537
H L + N L++ ++D+ L + D + V + PE K S KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 538 DVWSLGILILELLT-GKYP 555
D+W+ G+L+ E+ + GK P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E +G G G Y + ++ GQ +++ +E I + ++PN++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
Y +E ++ E++ GSL + +D + + ++ + +LH+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS----N 135
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA---YKSPEYAHNGKISK 535
+ H +KS N+LL LTD+ I P+ + + MV + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 78 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 132 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 25/221 (11%)
Query: 361 EVLGSGTFGASY----KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR--LGRLEHPNLL 414
+VLG G+FG + T +G Y +K K+ R+ + ++R L + HP ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 415 PLTAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ E KL L+ +F+ G L +L +K+ + + + + + G+ +LH
Sbjct: 94 KL-HYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE-LALGLDHLH 147
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTL--MVAYKSPEYAH 529
+ I + LK N+LLD LTD+ L + + A++ V Y +PE +
Sbjct: 148 S----LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 530 NGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
S +D WS G+L+ E+LTG P QG D K +++
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLP----FQGKDRKETMT 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 363 LGSGTFGASYKT-VISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+G G F Y+ + +G +K+ + M+ R D + I L +L HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+ E ++ E + G L+ ++ + KQ+ + +T K + + ++H+
Sbjct: 100 SFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-- 156
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN--AHTLMVA--YKSPEYAHNGKIS 534
+ H +K +NV + + L D L + AH+L+ Y SPE H +
Sbjct: 157 --VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 535 KKSDVWSLGILILELLTGKYP 555
KSD+WSLG L+ E+ + P
Sbjct: 215 FKSDIWSLGCLLYEMAALQSP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 165
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 166 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 271
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA- 418
E++GSG FG +K +G+ YV+KR K N E + +K L +L+H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGC 72
Query: 419 ---FYY----------RKEEKLLL--YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
F Y R + K L EF + G+L + ++ LD L++ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFE 129
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL---MV 520
+ KG+ Y+H++ + + LK SN+ L + + + D+ L + D +
Sbjct: 130 QITKGVDYIHSKK----LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 521 AYKSPEYAHNGKISKKSDVWSLGILILELL 550
Y SPE + K+ D+++LG+++ ELL
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 350 FDLQDMLRASAEVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHIKRL 405
FD ++LRA +G G+FG K I + Y +K + V R + + K L
Sbjct: 14 FDHFEILRA----IGKGSFG---KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL 66
Query: 406 G---RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKI 461
LEHP L+ L + +E+ ++ + + G L L N H K+ +T
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE------ETVKLF 120
Query: 462 IKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA 521
I +V + YL N+ I H +K N+LLD +TD+ + ++ + T M
Sbjct: 121 ICELVMALDYLQNQR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAG 176
Query: 522 ---YKSPEYAHNGK---ISKKSDVWSLGILILELLTGKYP 555
Y +PE + K S D WSLG+ ELL G+ P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 362 VLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
VLG G+FG K V+ + + +E ++ L +L+HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
F+ K L+ E G L ++ + R +II+ V+ G+ Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK--- 167
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H LK N+LL+ + + D+ L + Y +PE H G
Sbjct: 168 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 225
Query: 532 KISKKSDVWSLGILILELLTGKYPEN 557
+K DVWS G+++ LL+G P N
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 148
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 149 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 254
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRY-KQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
LGSG FG + S+G V+K K + V E + I+ L L+HPN++ + +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
++ E E G L ++ + + + L +++K ++ +AY H++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHSQH---- 144
Query: 481 IPHGHLKSSNVLLDRS--FEPL-LTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKIS 534
+ H LK N+L + P+ + D+ L L D T Y +PE ++
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE-VFKRDVT 203
Query: 535 KKSDVWSLGILILELLTGKYP 555
K D+WS G+++ LLTG P
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 147
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 148 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 166
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 167 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 272
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 362 VLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
VLG G+FG K V+ + + +E ++ L +L+HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
F+ K L+ E G L ++ + R +II+ V+ G+ Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK--- 168
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H LK N+LL+ + + D+ L + Y +PE H G
Sbjct: 169 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 226
Query: 532 KISKKSDVWSLGILILELLTGKYPEN 557
+K DVWS G+++ LL+G P N
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 150 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
K SD+W+LG +I +L+ G P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 343 VRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEH- 401
V D+ P D +++ LG G FG YK N + V+ K ++ E+ +++
Sbjct: 29 VTRDLNPEDFWEIIGE----LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 402 --IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
I L +HPN++ L +Y + +L EF G++ + +RP + Q ++
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQV 139
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP----LINPDNA 515
+ K + + YLH+ + I H LK+ N+L + L D+ + I +
Sbjct: 140 -VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX 194
Query: 516 HTLMVAYKSPEY-----AHNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ +PE + + K+DVWSLGI ++E+ + P + L
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASY-KTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLL 414
++LG G+F ++ + Y +K ++ ++ +E+ ++ R + RL+HP +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 415 PLTAFYYRKEEKLLL-YEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L F ++ +EKL + +NG L + ++ D +V + YLH
Sbjct: 93 KLY-FTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
G I H LK N+LL+ +TD+ +++P+ N Y SPE
Sbjct: 147 ----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
K SD+W+LG +I +L+ G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 152
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 153 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 258
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 139
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 140 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G FG Y+ V V + + + + E+F + + ++HPNL+ L R
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ EF+ G+L L + ++ + L + + M YL + + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK---NFI- 131
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + + D+ L L+ D AH + + +PE K S KS
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 538 DVWSLGILILELLT 551
DVW+ G+L+ E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 145
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 146 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 251
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 147
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP--DNAHT-----LMVAY 522
+L ++ H L + N +LD F + D+ L R + + D+ H L V +
Sbjct: 148 FLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 145 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 147
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 148 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
EV+G G FG K + +A V + + R+ F +++L R+ HPN++ L
Sbjct: 15 EVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
L+ E+ E GSL LH + P + +G+AYLH+ P ++
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 481 IPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL-MVAYKSPEYAHNGKISKKSD 538
I H LK N+LL L + D+ I + A+ +PE S+K D
Sbjct: 128 I-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 539 VWSLGILILELLTGKYP 555
V+S GI++ E++T + P
Sbjct: 187 VFSWGIILWEVITRRKP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTA 418
E +G G+FG +K + + Q V + + E Q+ I L + + P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG-LDWQTRLKIIKGVVKGMAYLHNELP 477
Y + + ++ E++ GS L PG LD I++ ++KG+ YLH+E
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALR-PLINPDNAHTLMVA---YKSPEYAHNGKI 533
H +K++NVLL E L D+ + L + V + +PE
Sbjct: 141 ----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 534 SKKSDVWSLGILILELLTGKYPENYL 559
K+D+WSLGI +EL G+ P + L
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 85 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIAR 139
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 140 QTAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 18/206 (8%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTA 418
E +G G+FG +K + + Q V + + E Q+ I L + + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG-LDWQTRLKIIKGVVKGMAYLHNELP 477
Y + + ++ E++ GS L PG LD I++ ++KG+ YLH+E
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD----NAHTLMVAYKSPEYAHNGKI 533
H +K++NVLL E L D+ + + N + +PE
Sbjct: 126 ----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 534 SKKSDVWSLGILILELLTGKYPENYL 559
K+D+WSLGI +EL G+ P + L
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
EV+G G FG K + +A V + + R+ F +++L R+ HPN++ L
Sbjct: 14 EVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
L+ E+ E GSL LH + P + +G+AYLH+ P ++
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 481 IPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL-MVAYKSPEYAHNGKISKKSD 538
I H LK N+LL L + D+ I + A+ +PE S+K D
Sbjct: 127 I-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 539 VWSLGILILELLTGKYP 555
V+S GI++ E++T + P
Sbjct: 186 VFSWGIILWEVITRRKP 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTA 418
E +G G+FG +K + + Q V + + E Q+ I L + + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG-LDWQTRLKIIKGVVKGMAYLHNELP 477
Y + + ++ E++ GS L PG LD I++ ++KG+ YLH+E
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALR-PLINPDNAHTLMVA---YKSPEYAHNGKI 533
H +K++NVLL E L D+ + L + V + +PE
Sbjct: 126 ----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 534 SKKSDVWSLGILILELLTGKYPENYL 559
K+D+WSLGI +EL G+ P + L
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 145
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 146 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 251
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
E +G G G Y + ++ GQ +++ +E I + ++PN++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
Y +E ++ E++ GSL + +D + + ++ + +LH+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS----N 135
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA---YKSPEYAHNGKISK 535
+ H +KS N+LL LTD+ I P+ + + MV + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA- 418
E++GSG FG +K +G+ YV++R K N E + +K L +L+H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNGC 73
Query: 419 ---FYY-----------------------RKEEKLLL--YEFVENGSLAGKLHANHTKQR 450
F Y R + K L EF + G+L + ++
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK- 132
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI 510
LD L++ + + KG+ Y+H++ + H LK SN+ L + + + D+ L +
Sbjct: 133 --LDKVLALELFEQITKGVDYIHSKK----LIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 511 NPDNAHTL---MVAYKSPEYAHNGKISKKSDVWSLGILILELL 550
D T + Y SPE + K+ D+++LG+++ ELL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 142
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 143 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 84 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIAR 138
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 139 QTAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 147
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 148 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 361 EVLGSGTFGASYK-TVISNGQAYV---VKRYKQMNNVGR-EDFQEHIKRLGRLEHPNLLP 415
EV+G G FG Y T++ N + VK ++ ++G F + HPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 416 LTAFYYRKE-EKLLLYEFVENGSLAG----KLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L R E L++ ++++G L + H K G Q V KGM
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKGMK 146
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-------NAHTLMVAY 522
YL ++ H L + N +LD F + D+ L R + + + L V +
Sbjct: 147 YLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTG---KYPE-------NYLLQG 562
+ E K + KSDVWS G+L+ EL+T YP+ YLLQG
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 252
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 362 VLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
VLG G+FG K V+ + + +E ++ L +L+HPN++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
F+ K L+ E G L ++ + R +II+ V+ G+ Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK--- 150
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H LK N+LL+ + + D+ L + Y +PE H G
Sbjct: 151 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 208
Query: 532 KISKKSDVWSLGILILELLTGKYPEN 557
+K DVWS G+++ LL+G P N
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 347 MEP-FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHI 402
M+P +D +M R + LG G +G Y+ V V + + + + E+F +
Sbjct: 3 MDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 403 KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKII 462
+ ++HPNL+ L R+ ++ EF+ G+L L + ++ + L +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMA 119
Query: 463 KGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT--- 517
+ M YL + + I H L + N L+ + + D+ L L+ D AH
Sbjct: 120 TQISSAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 175
Query: 518 LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ + +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 127 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 39/289 (13%)
Query: 341 SFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE 400
S RDD ++LQ+++ + A + + A K ++ + + K M+ + +E
Sbjct: 6 SINRDD---YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE---- 58
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGS---LAGKLHANHTKQRPGLDWQT 457
I+ + + HPN++ + K+E L+ + + GS + + A + LD T
Sbjct: 59 -IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL------IN 511
I++ V++G+ YLH G I H +K+ N+LL + D+ + I
Sbjct: 118 IATILREVLEGLEYLHKN--GQI--HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
Query: 512 PDNAHTLMV---AYKSPEYAHNGK-ISKKSDVWSLGILILELLTGKYPENYLLQGYDSKA 567
+ V + +PE + K+D+WS GI +EL TG P Y
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP----YHKYPPMK 229
Query: 568 SLSNWVNNMVKEKRTGDVFDKEMKGAKYSKS--EMINLLKIGLSCCEED 614
L + N TG V DKEM KY KS +MI+L C ++D
Sbjct: 230 VLMLTLQNDPPSLETG-VQDKEML-KKYGKSFRKMISL------CLQKD 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 341 SFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE 400
S RDD ++LQ+++ + A + + A K ++ + + K M+ + +E
Sbjct: 11 SINRDD---YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE---- 63
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGS---LAGKLHANHTKQRPGLDWQT 457
I+ + + HPN++ + K+E L+ + + GS + + A + LD T
Sbjct: 64 -IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL------IN 511
I++ V++G+ YLH G I H +K+ N+LL + D+ + I
Sbjct: 123 IATILREVLEGLEYLHKN--GQI--HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 512 PDNAHTLMV---AYKSPEYAHNGK-ISKKSDVWSLGILILELLTGKYP 555
+ V + +PE + K+D+WS GI +EL TG P
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G +G Y+ V V + + + + E+F + + ++HPNL+ L R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ EF+ G+L L + ++ + L + + M YL + + I
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK---NFI- 131
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + + D+ L L+ D AH + + +PE K S KS
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 538 DVWSLGILILELLT 551
DVW+ G+L+ E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 14 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 14 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 122
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 123 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 358 ASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
+ E+LG G FG +K + G K K +E+ + I + +L+H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+ K + +L+ E+V+ G L ++ + + LD + +K + +G+ ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELD---TILFMKQICEGIRHMHQ-- 205
Query: 477 PGSIIPHGHLKSSNVL-LDRSFEPL-LTDYALRPLINPDNAHTLMVAYKSPEY-----AH 529
I H LK N+L ++R + + + D+ L P L V + +PE+ +
Sbjct: 206 --MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--REKLKVNFGTPEFLAPEVVN 261
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+S +D+WS+G++ LL+G P
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 14 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 346 DMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
D P +DM + ++E+LG G + V + NG+ Y VK ++ R ++
Sbjct: 4 DSLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 405 LGRLE-HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + + + N+L L F+ L++E ++ GS+ H +++ + + ++++
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILA-----HIQKQKHFNEREASRVVR 118
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLD--RSFEPL-LTDYALRPLINPDNAHTLMV 520
V + +LH + I H LK N+L + P+ + D+ L + +N+ T +
Sbjct: 119 DVAAALDFLHTKG----IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 521 A-----------YKSPEYA-----HNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE K+ D+WSLG+++ +L+G YP
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG-YP 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
+ +G G FG Y+ G VK K N+ + F + +L H NL+ L
Sbjct: 27 QTIGKGEFGDVMLGDYR-----GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 417 TAFYYRKEEKLLLY---EFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
EEK LY E++ GSL L ++ R L LK V + M YL
Sbjct: 80 LGVIV--EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVAYKSPEYAHNGK 532
G+ H L + NVL+ ++D+ L + + + L V + +PE K
Sbjct: 135 ----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 190
Query: 533 ISKKSDVWSLGILILELLT-GKYP 555
S KSDVWS GIL+ E+ + G+ P
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 14 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 127 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
+ +G G FG Y+ G VK K N+ + F + +L H NL+ L
Sbjct: 12 QTIGKGEFGDVMLGDYR-----GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 417 TAFYYRKEEKLLLY---EFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
EEK LY E++ GSL L ++ R L LK V + M YL
Sbjct: 65 LGVIV--EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVAYKSPEYAHNGK 532
G+ H L + NVL+ ++D+ L + + + L V + +PE K
Sbjct: 120 ----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 175
Query: 533 ISKKSDVWSLGILILELLT-GKYP 555
S KSDVWS GIL+ E+ + G+ P
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 361 EVLGS-GTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEH---IKRLGRLEHPNLLPL 416
E++G G FG YK N + V+ K ++ E+ +++ I L +HPN++ L
Sbjct: 15 EIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+Y + +L EF G++ + +RP + Q ++ + K + + YLH+
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQV-VCKQTLDALNYLHD-- 126
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-----RPLINPDNAHTLMVAYKSPEY---- 527
+ I H LK+ N+L + L D+ + R I ++ + +PE
Sbjct: 127 --NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 528 -AHNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ + K+DVWSLGI ++E+ + P + L
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 127 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
LG G +G Y+ V V + + + + E+F + + ++HPNL+ L R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 423 KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
+ ++ EF+ G+L L + ++ + L + + M YL + + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK---NFI- 131
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVAYKSPEYAHNGKISKKS 537
H L + N L+ + + D+ L L+ D AH + + +PE K S KS
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 538 DVWSLGILILELLT 551
DVW+ G+L+ E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 76 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 186
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 246
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 247 DIWSMGLSLVEMAVGRYP 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 127 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 33 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 91
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREKHK-- 144
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 145 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 203
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 204 DIWSMGLSLVEMAVGRYP 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
AE LG G FG ++ V ++ + + ++ ++ + ++ I L H N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ EE ++++EF+ + +++ + + L+ + + + V + + +LH+ G
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFE----LNEREIVSYVHQVCEALQFLHSHNIG- 124
Query: 480 IIPHGHLKSSNVLLD--RSFEPLLTDYALRPLINP-DNAHTLMVA--YKSPEYAHNGKIS 534
H ++ N++ RS + ++ + P DN L A Y +PE + +S
Sbjct: 125 ---HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 535 KKSDVWSLGILILELLTGKYP 555
+D+WSLG L+ LL+G P
Sbjct: 182 TATDMWSLGTLVYVLLSGINP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 14 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 124
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 41 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 151
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + A++ + +Y SPE S +S
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 211
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 212 DIWSMGLSLVEMAVGRYP 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 361 EVLGSGTFGASYKTVISNG----QAYVVKRYKQMNNVGREDFQEHIKR--LGRLEHPNLL 414
+VLG G+FG + +G Q Y +K K+ R+ + ++R L + HP ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 415 PLTAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ E KL L+ +F+ G L +L +K + +A
Sbjct: 91 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED---------VKFYLAELALAL 140
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTL--MVAYKSPEYAH 529
+ L I + LK N+LLD LTD+ L + + A++ V Y +PE +
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 530 NGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
++ +D WS G+L+ E+LTG P QG D K +++
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLP----FQGKDRKETMT 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 361 EVLGSGTFGASYKTVISNG----QAYVVKRYKQMNNVGREDFQEHIKR--LGRLEHPNLL 414
+VLG G+FG + +G Q Y +K K+ R+ + ++R L + HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 415 PLTAFYYRKEEKL-LLYEFVENGSLAGKLHAN--HTKQRPGLDWQTRLKIIKGVVKGMAY 471
L + ++ E KL L+ +F+ G L +L T++ +K + +A
Sbjct: 90 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-----------VKFYLAELAL 137
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTL--MVAYKSPEY 527
+ L I + LK N+LLD LTD+ L + + A++ V Y +PE
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
+ ++ +D WS G+L+ E+LTG P QG D K +++
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP----FQGKDRKETMT 236
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 21/232 (9%)
Query: 347 MEP---FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE 400
M+P +D +M R + LG G +G Y+ V V + + + + E+F +
Sbjct: 3 MDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK 62
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK 460
+ ++HPNL+ L R+ ++ EF+ G+L L + ++ + L
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLY 119
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT- 517
+ + M YL + + I H L + N L+ + + D+ L L+ D AH
Sbjct: 120 MATQISSAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 518 --LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ + +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKR---YKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LG+G G +K V V+ R + ++ R ++ L P ++
Sbjct: 17 LGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+Y E + E ++ GSL L K+ + Q K+ V+KG+ YL +
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLREK---H 127
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNGKISKKS 537
I H +K SN+L++ E L D+ + + + A+ + +Y SPE S +S
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQS 187
Query: 538 DVWSLGILILELLTGKYP 555
D+WS+G+ ++E+ G+YP
Sbjct: 188 DIWSMGLSLVEMAVGRYP 205
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 361 EVLGSGTFGASYKTVISNG----QAYVVKRYKQMNNVGREDFQEHIKR--LGRLEHPNLL 414
+VLG G+FG + +G Q Y +K K+ R+ + ++R L + HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 415 PLTAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ E KL L+ +F+ G L +L +K + +A
Sbjct: 90 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED---------VKFYLAELALAL 139
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTL--MVAYKSPEYAH 529
+ L I + LK N+LLD LTD+ L + + A++ V Y +PE +
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 530 NGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
++ +D WS G+L+ E+LTG P QG D K +++
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLP----FQGKDRKETMT 236
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 127 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 27/216 (12%)
Query: 363 LGSGTFGASYKTVISN------GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG + N VK K+ + R+DFQ + L L+H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 417 TAFYYRKEEKLLLYEFVENGSL---------AGKLHANHTKQRPG-LDWQTRLKIIKGVV 466
L+++E++ +G L KL A PG L L + V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD----NAHTLM-V 520
GM Y L G H L + N L+ + + D+ + R + + D T++ +
Sbjct: 140 AGMVY----LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 521 AYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ PE K + +SDVWS G+++ E+ T GK P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 360 AEVLGSGTFGASYKTVIS----NGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEH 410
+ LG GTFG K + G VK + + ++ VG+ + I+ L H
Sbjct: 21 GDTLGVGTFG---KVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRH 75
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P+++ L + ++ E+V G L + N LD + ++ + ++ G+
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSGVD 130
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHN 530
Y H + + H LK NVLLD + D+ L +++ + L + SP YA
Sbjct: 131 YCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAP 184
Query: 531 GKISKK------SDVWSLGILILELLTGKYP 555
IS + D+WS G+++ LL G P
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 27/216 (12%)
Query: 363 LGSGTFGASYKTVISN------GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG + N VK K+ + R+DFQ + L L+H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 417 TAFYYRKEEKLLLYEFVENGSL---------AGKLHANHTKQRPG-LDWQTRLKIIKGVV 466
L+++E++ +G L KL A PG L L + V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD----NAHTLM-V 520
GM Y L G H L + N L+ + + D+ + R + + D T++ +
Sbjct: 169 AGMVY----LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 521 AYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ PE K + +SDVWS G+++ E+ T GK P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 27/216 (12%)
Query: 363 LGSGTFGASYKTVISN------GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG + N VK K+ + R+DFQ + L L+H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 417 TAFYYRKEEKLLLYEFVENGSL---------AGKLHANHTKQRPG-LDWQTRLKIIKGVV 466
L+++E++ +G L KL A PG L L + V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD----NAHTLM-V 520
GM Y L G H L + N L+ + + D+ + R + + D T++ +
Sbjct: 146 AGMVY----LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 521 AYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ PE K + +SDVWS G+++ E+ T GK P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 305 RASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRAS 359
R +S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 10 RTTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTD 62
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRY 118
Query: 419 FYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
F+Y EK L+ ++V H + KQ + + +L + + + + +AY+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 176
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYA 528
H+ I H +K N+LLD L L D+ + + L+ P+ ++ Y++PE
Sbjct: 177 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 529 HNGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 305 RASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRAS 359
R +S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 8 RTTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTD 60
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRY 116
Query: 419 FYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
F+Y EK L+ ++V H + KQ + + +L + + + + +AY+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 174
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYA 528
H+ I H +K N+LLD L L D+ + + L+ P+ ++ Y++PE
Sbjct: 175 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 529 HNGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 305 RASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRAS 359
R +S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTD 58
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRY 114
Query: 419 FYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
F+Y EK L+ ++V H + KQ + + +L + + + + +AY+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 172
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYA 528
H+ I H +K N+LLD L L D+ + + L+ P+ ++ Y++PE
Sbjct: 173 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 529 HNGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 28/217 (12%)
Query: 350 FDLQDMLRASAEVLGSGTFGASYKT-VISNGQAYVVK--------RYKQMNNVGREDFQE 400
+ LQD LG+G+FG + NG+ Y +K R KQ+ + E
Sbjct: 3 YSLQDF--QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM- 59
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK 460
L + HP ++ + + ++ ++ +++E G L L + P +
Sbjct: 60 ----LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA--- 112
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
V + YLH++ I + LK N+LLD++ +TD+ + PD + L
Sbjct: 113 --AEVCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYXLCG 165
Query: 521 A--YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE +K D WS GILI E+L G P
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 85 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIAR 139
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + +H
Sbjct: 140 QTAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 305 RASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRAS 359
R +S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 51 RTTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTD 103
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRY 159
Query: 419 FYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
F+Y EK L+ ++V H + KQ + + +L + + + + +AY+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 217
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYA 528
H+ I H +K N+LLD L L D+ + + L+ P+ ++ Y++PE
Sbjct: 218 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 529 HNGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 271
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQIS 328
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H +L + N L+ + + D+ L L+ D AH +
Sbjct: 329 SAMEYLEKK---NFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 363 LGSGTFGASYKTVISN------GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG + N VK K R+DFQ + L L+H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTR-----------LKIIKGV 465
+ ++++E++++G L L A+ +D Q R L I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD----NAHTLM- 519
GM YL ++ H L + N L+ + + D+ + R + + D HT++
Sbjct: 143 ASGMVYLASQH----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 520 VAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ + PE K + +SDVWS G+++ E+ T GK P
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 134
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 135 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 236
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 121
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 122 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 346 DMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
D+ +D + VLG GT+G Y +SN +K + ++ + E I
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD-WQTRLKIIK 463
L+H N++ + + E V GSL+ L +K P D QT K
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR---SKWGPLKDNEQTIGFYTK 129
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPL---INP-DNAHTL 518
+++G+ YLH+ + I H +K NVL++ L ++D+ INP T
Sbjct: 130 QILEGLKYLHD----NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 185
Query: 519 MVAYKSPEYAHNG--KISKKSDVWSLGILILELLTGKYP 555
+ Y +PE G K +D+WSLG I+E+ TGK P
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
D + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 63 LRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 117
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 118 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 123
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H L + N L+ + + D+ L L+ D AH +
Sbjct: 124 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
+ +G G FG Y+ G VK K N+ + F + +L H NL+ L
Sbjct: 199 QTIGKGEFGDVMLGDYR-----GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 417 TAFYYRKEEKLLLY---EFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
EEK LY E++ GSL L ++ R L LK V + M YL
Sbjct: 252 LGVIV--EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVAYKSPEYAHNGK 532
G+ H L + NVL+ ++D+ L + + + L V + +PE K
Sbjct: 307 ----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 362
Query: 533 ISKKSDVWSLGILILELLT-GKYP 555
S KSDVWS GIL+ E+ + G+ P
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIK 403
RD + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 77 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIAR 131
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL---- 518
+GM YLH + SII H LKS+N+ L + D+ L + +H
Sbjct: 132 QTAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 519 -MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
D + +++ D + +GSG+FG YK A + + F+ +
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 63 LRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 117
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 118 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 18/201 (8%)
Query: 363 LGSGTFGA---SYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
LGSG +G V +A + R ++ E + L L+HPN++ L F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS 479
+ K L+ E + G L ++ H + +D IIK V+ G+ YLH
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEII--HRMKFNEVDAAV---IIKQVLSGVTYLHKH---- 155
Query: 480 IIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNA--HTLMVAYKSPEYAHNGKIS 534
I H LK N+LL+ + L D+ L + L AY K
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 535 KKSDVWSLGILILELLTGKYP 555
+K DVWS+G+++ LL G YP
Sbjct: 216 EKCDVWSIGVILFILLAG-YP 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 362 VLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
VLG G+FG K V+ + + +E ++ L +L+HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
F+ K L+ E G L ++ + R +II+ V+ G+ Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYXHK--- 144
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H LK N+LL+ + + D+ L + Y +PE H G
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH-G 202
Query: 532 KISKKSDVWSLGILILELLTGKYPEN 557
+K DVWS G+++ LL+G P N
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
VLG GT+G Y +SN +K + ++ + E I L+H N++ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD-WQTRLKIIKGVVKGMAYLHNELPGS 479
+ E V GSL+ L +K P D QT K +++G+ YLH+ +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLR---SKWGPLKDNEQTIGFYTKQILEGLKYLHD----N 127
Query: 480 IIPHGHLKSSNVLLDRSFEPL-LTDYALRPL---INP-DNAHTLMVAYKSPEYAHNG--K 532
I H +K NVL++ L ++D+ INP T + Y +PE G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
K +D+WSLG I+E+ TGK P
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPP 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 361 EVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
+ +G G FG Y+ G VK K N+ + F + +L H NL+ L
Sbjct: 18 QTIGKGEFGDVMLGDYR-----GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 417 TAFYYRKEEKLLLY---EFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
EEK LY E++ GSL L ++ R L LK V + M YL
Sbjct: 71 LGVIV--EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVAYKSPEYAHNGK 532
G+ H L + NVL+ ++D+ L + + + L V + +PE
Sbjct: 126 ----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAA 181
Query: 533 ISKKSDVWSLGILILELLT-GKYP 555
S KSDVWS GIL+ E+ + G+ P
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 363 LGSGTFGA----SYKTVISNGQAYVVKRYKQMNNVG---REDFQEHIKRLGRLEHPNLLP 415
LG G FG+ Y + N A V KQ+ + G + DFQ I+ L L ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVA--VKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 416 LTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
Y R E +L++ E++ +G L L + R LD L + KGM YL
Sbjct: 73 YRGVSYGPGRPELRLVM-EYLPSGCLRDFLQ----RHRARLDASRLLLYSSQICKGMEYL 127
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSP 525
+ H L + N+L++ + D+ L L+ D ++ + + +P
Sbjct: 128 GSRR----CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 526 EYAHNGKISKKSDVWSLGILILELLT 551
E + S++SDVWS G+++ EL T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQAYVVK-RYKQMNNV----GREDFQEHIKRLGRLEHPNL 413
+VLGSG FG YK + + G+ + K +N +F + + ++HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+ L +L+ + + +G L +H + + + Q L + KGM YL
Sbjct: 80 VRLLGVCLSPTIQLVT-QLMPHGCLLEYVH----EHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
+ H L + NVL+ +TD+ L L+ D + + + + + E
Sbjct: 135 ERR----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
H K + +SDVWS G+ I EL+T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 268
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 325
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H +L + N L+ + + D+ L L+ D AH +
Sbjct: 326 SAMEYLEKK---NFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 427
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQAYVVK-RYKQMNNV----GREDFQEHIKRLGRLEHPNL 413
+VLGSG FG YK + + G+ + K +N +F + + ++HP+L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+ L +L+ + + +G L +H + + + Q L + KGM YL
Sbjct: 103 VRLLGVCLSPTIQLVT-QLMPHGCLLEYVH----EHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEY 527
+ H L + NVL+ +TD+ L L+ D + + + + + E
Sbjct: 158 ERR----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
H K + +SDVWS G+ I EL+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 305 RASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRAS 359
R +S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTD 58
Query: 360 AEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRY 114
Query: 419 FYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
F+Y EK L+ ++V H + KQ + + +L + + + + +AY+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 172
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYA 528
H+ I H +K N+LLD L L D+ + + L+ P+ + Y++PE
Sbjct: 173 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 529 HNGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 122
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN-----AHTLMVA 521
M YL + + I H L + N L+ + + D+ L L+ D +
Sbjct: 123 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 178
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 310
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 367
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD--NAHT---LMVA 521
M YL + + I H +L + N L+ + + D+ L L+ D AH +
Sbjct: 368 SAMEYLEKK---NFI-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 469
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 363 LGSGTFGASYKTVISN------GQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG + N VK K ++ R+DF + L L+H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHAN------HTKQRP--GLDWQTRLKIIKGVVKG 468
+ ++++E++++G L L A+ + P L L I + + G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD----NAHTLM-VAY 522
M YL ++ H L + N L+ + + D+ + R + + D HT++ + +
Sbjct: 141 MVYLASQH----FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
PE K + +SDVWSLG+++ E+ T GK P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
DD E D Q + + +GSG+FG YK A + + F+ +
Sbjct: 1 DDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 58 LRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 112
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 113 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 363 LGSGTFGA----SYKTVISNGQAYVVKRYKQMNNVG---REDFQEHIKRLGRLEHPNLLP 415
LG G FG+ Y + N A V KQ+ + G + DFQ I+ L L ++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVA--VKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 416 LTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
Y R+ +L++ E++ +G L L + R LD L + KGM YL
Sbjct: 89 YRGVSYGPGRQSLRLVM-EYLPSGCLRDFLQ----RHRARLDASRLLLYSSQICKGMEYL 143
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSP 525
+ H L + N+L++ + D+ L L+ D + ++ + + +P
Sbjct: 144 GSRR----CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 526 EYAHNGKISKKSDVWSLGILILELLT 551
E + S++SDVWS G+++ EL T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 350 FDLQDMLRASAEV---LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+D +M R + LG G +G Y+ V V + + + + E+F + +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 407 RLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
++HPNL+ L R+ ++ EF+ G+L L + ++ + L + +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQIS 123
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN-----AHTLMVA 521
M YL + + I H L + N L+ + + D+ L L+ D +
Sbjct: 124 SAMEYLEKK---NFI-HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 179
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
+ +PE K S KSDVW+ G+L+ E+ T YP L Q Y+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
DD E D Q + + +GSG+FG YK A + + F+ +
Sbjct: 3 DDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 59
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 60 LRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 114
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 115 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 363 LGSGTFGA----SYKTVISNGQAYVVKRYKQMNNVG---REDFQEHIKRLGRLEHPNLLP 415
LG G FG+ Y + N A V KQ+ + G + DFQ I+ L L ++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVA--VKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 416 LTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
Y R+ +L++ E++ +G L L + R LD L + KGM YL
Sbjct: 76 YRGVSYGPGRQSLRLVM-EYLPSGCLRDFLQ----RHRARLDASRLLLYSSQICKGMEYL 130
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSP 525
+ H L + N+L++ + D+ L L+ D + ++ + + +P
Sbjct: 131 GSRR----CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 526 EYAHNGKISKKSDVWSLGILILELLT 551
E + S++SDVWS G+++ EL T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 363 LGSGTFGA----SYKTVISNGQAYVVKRYKQMNNVG---REDFQEHIKRLGRLEHPNLLP 415
LG G FG+ Y + N A V KQ+ + G + DFQ I+ L L ++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVA--VKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 416 LTAFYYR--KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
Y ++ L+ E++ +G L L + R LD L + KGM YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ----RHRARLDASRLLLYSSQICKGMEYLG 132
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPE 526
+ H L + N+L++ + D+ L L+ D + ++ + + +PE
Sbjct: 133 SRR----CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ S++SDVWS G+++ EL T
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLLPLTA 418
LG G FG Y V + + + +E + ++R L HPN+L L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
++Y + L+ E+ G L +L + T D Q I++ + + Y H G
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCT-----FDEQRTATIMEELADALMYCH----G 141
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL E + D+ + P M Y PE ++
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGW-SVHAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+W +G+L ELL G P
Sbjct: 201 KVDLWCIGVLCYELLVGNPP 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRY---KQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G GT+G YK + G+ + +K+ K+ + +E I L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ K+ +L++E ++ L L GL+ T + ++ G+AY H+
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEYAHNG-K 532
+ H LK N+L++R E + D+ L R P +T + + Y++P+ K
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 533 ISKKSDVWSLGILILELLTG 552
S D+WS+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRY---KQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G GT+G YK + G+ + +K+ K+ + +E I L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ K+ +L++E ++ L L GL+ T + ++ G+AY H+
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEYAHNG-K 532
+ H LK N+L++R E + D+ L R P +T V Y++P+ K
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 533 ISKKSDVWSLGILILELLTG 552
S D+WS+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G T G+ VK+ RE + + H N++ + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++YLHN+ G I
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIATVCLSVLRALSYLHNQ--GVI- 163
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 164 -HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 348 EPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLG 406
+P ++ D+L E LG G++G+ YK + GQ +K+ D QE IK +
Sbjct: 26 QPEEVFDVL----EKLGEGSYGSVYKAIHKETGQIVAIKQVPV-----ESDLQEIIKEIS 76
Query: 407 RLEH---PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
++ P+++ Y++ + ++ E+ GS++ + + L I++
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQ 132
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA-- 521
+KG+ YLH I H +K+ N+LL+ L D+ + + A V
Sbjct: 133 STLKGLEYLH--FMRKI--HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGT 188
Query: 522 --YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE + +D+WSLGI +E+ GK P
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRY---KQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G GT+G YK + G+ + +K+ K+ + +E I L L+H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ K+ +L++E ++ L L GL+ T + ++ G+AY H+
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEYAHNG-K 532
+ H LK N+L++R E + D+ L R P +T V Y++P+ K
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 533 ISKKSDVWSLGILILELLTG 552
S D+WS+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTA 418
E +G G+FG +K + + Q V + + E Q+ I L + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
Y + + ++ E++ GS L A P ++Q ++K ++KG+ YLH+E
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG-----PFDEFQIA-TMLKEILKGLDYLHSEKK- 141
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD----NAHTLMVAYKSPEYAHNGKIS 534
H +K++NVLL + L D+ + + N + +PE
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 535 KKSDVWSLGILILELLTGKYP 555
K+D+WSLGI +EL G+ P
Sbjct: 199 SKADIWSLGITAIELAKGEPP 219
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 306 ASSYEDSSK---LPTSFGSSKVXXXXXXXXXXADYGKLSFV--RDDMEPFDLQDMLRASA 360
+S+ +S K P++FGS KV D K++ V P Q++
Sbjct: 1 TTSFAESCKPVQQPSAFGSMKVSRDK-------DGSKVTTVVATPGQGPDRPQEVSYTDT 53
Query: 361 EVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
+V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H N++ L F
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHCNIVRLRYF 109
Query: 420 YYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
+Y EK L+ ++V H + KQ + + +L + + + + +AY+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 167
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVAYKSPEYAH 529
+ I H +K N+LLD L L D+ + + L+ P+ ++ Y++PE
Sbjct: 168 S----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 530 NGKISKKS-DVWSLGILILELLTGK 553
S DVWS G ++ ELL G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 45/216 (20%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVK-------RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
+LG G+FG K Q Y VK + K + + RE ++ L +L+HPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-----VELLKKLDHPNI 83
Query: 414 LPLTAFYYRKEEKLLLYEFVENGS---LAGKLHA-----NHTKQRPGLDWQTRLKIIKGV 465
+ L +E +E+ S + G+L+ + +R +IIK V
Sbjct: 84 MKL-------------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA- 521
G+ Y+H I H LK N+LL+ + + + D+ L + +
Sbjct: 131 FSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 522 --YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE G +K DVWS G+++ LL+G P
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G + +L ++ D Q I + ++Y H++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
R ++ L P ++ +Y E + E ++ GSL L K+ +
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KEAKRIP 112
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN 514
+ K+ V++G+AYL + I H +K SN+L++ E L D+ + +
Sbjct: 113 EEILGKVSIAVLRGLAYLREK---HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 169
Query: 515 AHTLM--VAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
A++ + +Y +PE S +SD+WS+G+ ++EL G+YP
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 363 LGSGTFGASYKTVISN-GQAYVVKRYKQMNN--VGREDFQEHIKRLGRLEHPNLLPLTAF 419
+G G++G +K + GQ +K++ + + V ++ I+ L +L+HPNL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 420 YYRKEEKLLLYEFVENGSLAGKLHANHTKQR-------PGLDWQTRLKIIKGVVKGMAYL 472
+ RK L++E+ ++ LH QR + WQT + +
Sbjct: 71 FRRKRRLHLVFEYCDHTV----LHELDRYQRGVPEHLVKSITWQTLQAV------NFCHK 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPE-Y 527
HN + H +K N+L+ + L D+ R L P + + VA Y+SPE
Sbjct: 121 HNCI------HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 528 AHNGKISKKSDVWSLGILILELLTG 552
+ + DVW++G + ELL+G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 154
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 211
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 212 KVDLWSLGVLCYEFLVGKPP 231
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
DD E D Q + + +GSG+FG YK A + + F+ +
Sbjct: 1 DDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y K + ++ ++ E SL LH TK + + I +
Sbjct: 58 LRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 112
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + +H
Sbjct: 113 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 168
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDF--QEHIKRLGRLEHPNLLPLTAFY 420
+G G+FG YK + ++ + V + + E Q+ I L + + P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL-KIIKGVVKGMAYLHNELPGS 479
+ + ++ E++ GS L +PG +T + I++ ++KG+ YLH+E
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-------KPGPLEETYIATILREILKGLDYLHSERK-- 137
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALR-PLINPDNAHTLMVA---YKSPEYAHNGKISK 535
H +K++NVLL + L D+ + L + V + +PE
Sbjct: 138 --IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 536 KSDVWSLGILILELLTGKYPENYL 559
K+D+WSLGI +EL G+ P + L
Sbjct: 196 KADIWSLGITAIELAKGEPPNSDL 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 361 EVLGSGTFGASYKTV-IS---NGQAYVVKRYKQMNNVGREDFQEHIKRLGR-LEHPNLLP 415
+VLG+G +G + IS G+ Y +K K+ V + EH + + LEH P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 416 LTA---FYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAY 471
+ ++ E KL L+ +++ G L H QR + +V + +
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELF-----THLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL-----MVAYKSPE 526
LH I + +K N+LLD + +LTD+ L D + Y +P+
Sbjct: 175 LHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 527 YAHNGKI--SKKSDVWSLGILILELLTGKYP 555
G K D WSLG+L+ ELLTG P
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q G+ ++ + +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ ++
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 138
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ + + + +PE +
Sbjct: 139 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 149
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 150 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q G+ ++ + +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ ++
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR 404
DD E D Q + + +GSG+FG YK A + + F+ +
Sbjct: 1 DDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L + H N+L L Y + ++ ++ E SL LH TK + + I +
Sbjct: 58 LRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQ 112
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP-DNAHTL----- 518
+GM YLH + SII H LKS+N+ L + D+ L + + +H
Sbjct: 113 TAQGMDYLHAK---SII-HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 519 MVAYKSPEYAH---NGKISKKSDVWSLGILILELLTGKYP 555
+ + +PE S +SDV++ GI++ EL+TG+ P
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 147
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 148 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 145
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 146 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 202
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 203 KVDLWSLGVLCYEFLVGKPP 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 378 NGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGS 437
+G+ VK RE + + +H N++ + Y EE +L EF++ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 438 LAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSF 497
L + L+ + + + V++ +AYLH + G I H +KS ++LL
Sbjct: 129 LTDIVSQVR------LNEEQIATVCEAVLQALAYLHAQ--GVI--HRDIKSDSILLTLDG 178
Query: 498 EPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKISKKSDVWSLGILILELLTGK 553
L+D+ I+ D + + +PE + + D+WSLGI+++E++ G+
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 554 YP 555
P
Sbjct: 239 PP 240
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 92 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 142
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 143 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ ++
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 192
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 193 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 78
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 136
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ ++
Sbjct: 137 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 86
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 144
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ ++
Sbjct: 145 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 363 LGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYY 421
+G G+ G TV S+G+ VK+ RE + + +H N++ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 422 RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSII 481
+E ++ EF+E G+L + HT+ ++ + + V++ ++ LH + G I
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTR----MNEEQIAAVCLAVLQALSVLHAQ--GVI- 269
Query: 482 PHGHLKSSNVLLDRSFEPLLTDYALRPLIN---PDNAHTLMVAY-KSPEYAHNGKISKKS 537
H +KS ++LL L+D+ ++ P + Y +PE +
Sbjct: 270 -HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 538 DVWSLGILILELLTGKYP 555
D+WSLGI+++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 45/216 (20%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVK-------RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
+LG G+FG K Q Y VK + K + + RE ++ L +L+HPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-----VELLKKLDHPNI 83
Query: 414 LPLTAFYYRKEEKLLLYEFVENGS---LAGKLHA-----NHTKQRPGLDWQTRLKIIKGV 465
+ L +E +E+ S + G+L+ + +R +IIK V
Sbjct: 84 MKL-------------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA- 521
G+ Y+H I H LK N+LL+ + + + D+ L + +
Sbjct: 131 FSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 522 --YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE G +K DVWS G+++ LL+G P
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 127
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 128 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 185 KVDLWSLGVLCYEFLVGKPP 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 132
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 133 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 190 KVDLWSLGVLCYEFLVGKPP 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 32/235 (13%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNV--GREDFQEHIKRLGRLEHPNLLPLT 417
+ LG G +G V + V + M E+ ++ I L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV--- 67
Query: 418 AFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
FY + E + L E+ G L ++ + P + ++ G+ YLH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLH- 121
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPEYA 528
G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 529 HNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y N + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 45/216 (20%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVK-------RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
+LG G+FG K Q Y VK + K + + RE ++ L +L+HPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-----VELLKKLDHPNI 83
Query: 414 LPLTAFYYRKEEKLLLYEFVENGS---LAGKLHA-----NHTKQRPGLDWQTRLKIIKGV 465
+ L +E +E+ S + G+L+ + +R +IIK V
Sbjct: 84 MKL-------------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA- 521
G+ Y+H I H LK N+LL+ + + + D+ L + +
Sbjct: 131 FSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 522 --YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE G +K DVWS G+++ LL+G P
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSXQEYSDW-----KEKKT 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 343 VRDDMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEH 401
VR D++P ++ +++ LG G FG YK G K + + ED+
Sbjct: 3 VRRDLDPNEVWEIVGE----LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 58
Query: 402 IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSL-AGKLHANHTKQRPGLDWQTRLK 460
I+ L +HP ++ L YY + ++ EF G++ A L + P +
Sbjct: 59 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----V 113
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+ + +++ + +LH++ I H LK+ NVL+ + L D+ ++ N TL
Sbjct: 114 VCRQMLEALNFLHSKR----IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQK 165
Query: 521 A--------YKSPEYA-----HNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ +PE + K+D+WSLGI ++E+ + P + L
Sbjct: 166 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTELCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 129
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL--MVAYKSPEYAHNGKISKK 536
+ H +K N+LL + E + D+ TL + Y PE +K
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 537 SDVWSLGILILELLTGKYP 555
D+WSLG+L E L GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 32/235 (13%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNV--GREDFQEHIKRLGRLEHPNLLPLT 417
+ LG G +G V + V + M E+ ++ I L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV--- 68
Query: 418 AFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
FY + E + L E+ G L ++ + P + ++ G+ YLH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLH- 122
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPEYA 528
G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 529 HNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 66
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 67 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 119
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 120 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 353 QDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPN 412
+++ + +V+G+G+FG ++ + +K+ Q + Q I R+ ++HPN
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ--IMRI--VKHPN 93
Query: 413 LLPLTAFYY----RKEEKL--LLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
++ L AF+Y +K+E L+ E+V E A + +A + P L + + +
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQL 150
Query: 466 VKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEPL-LTDYALRPLI---NPDNAHTLMV 520
++ +AY+H SI I H +K N+LLD L L D+ ++ P+ +
Sbjct: 151 LRSLAYIH-----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 521 AYKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE + D+WS G ++ EL+ G+
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 32/235 (13%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNV--GREDFQEHIKRLGRLEHPNLLPLT 417
+ LG G +G V + V + M E+ ++ I L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV--- 67
Query: 418 AFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
FY + E + L E+ G L ++ + P + ++ G+ YLH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLH- 121
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPEYA 528
G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 529 HNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV-VKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTA 418
E LG+GT+ YK + YV +K K + G I + L+H N++ L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRP-GLDWQTRLKIIKGVVKGMAYLHNELP 477
+ + + L++EF++N L + + P GL+ +++G+A+ H
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE--- 126
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL----INPDNAHTLMVAYKSPEYAHNGKI 533
+ I H LK N+L+++ + L D+ L +N ++ + + Y++P+ +
Sbjct: 127 -NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 534 SKKS-DVWSLGILILELLTGK 553
S D+WS G ++ E++TGK
Sbjct: 186 YSTSIDIWSCGCILAEMITGK 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 360 AEVLGSGTFGASYKTVIS----NGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEH 410
+ LG GTFG K I G VK + + ++ VG+ + I+ L H
Sbjct: 16 GDTLGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRH 70
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P+++ L + ++ E+V G L + H + + + R ++ + ++ +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVE---EMEAR-RLFQQILSAVD 125
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHN 530
Y H + + H LK NVLLD + D+ L +++ + L + SP YA
Sbjct: 126 YCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAP 179
Query: 531 GKISKK------SDVWSLGILILELLTGKYP 555
IS + D+WS G+++ LL G P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 129
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL--MVAYKSPEYAHNGKISKK 536
+ H +K N+LL + E + D+ TL + Y PE +K
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 537 SDVWSLGILILELLTGKYP 555
D+WSLG+L E L GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 343 VRDDMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEH 401
VR D++P ++ +++ LG G FG YK G K + + ED+
Sbjct: 11 VRRDLDPNEVWEIVGE----LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 402 IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSL-AGKLHANHTKQRPGLDWQTRLK 460
I+ L +HP ++ L YY + ++ EF G++ A L + P +
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----V 121
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+ + +++ + +LH++ I H LK+ NVL+ + L D+ ++ N TL
Sbjct: 122 VCRQMLEALNFLHSKR----IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQK 173
Query: 521 A--------YKSPEYA-----HNGKISKKSDVWSLGILILELLTGKYPENYL 559
+ +PE + K+D+WSLGI ++E+ + P + L
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVV- 68
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 69 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 121
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 226
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 129
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRL----GRLEHPNLLP 415
+ LG G +G V + V + M D E+IK+ L H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVV- 67
Query: 416 LTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
FY + E + L E+ G L ++ + P + ++ G+ YL
Sbjct: 68 --KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYL 120
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM------VAYKSPE 526
H G I H +K N+LLD ++D+ L + +N L+ + Y +PE
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 527 YAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRT 582
+ ++ DVWS GI++ +L G+ P + Q DS S+W KEK+T
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW-----KEKKT 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNLLPL 416
E LG G+FG Q V ++ + + D ++R L L HP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+ +++ E+ AG ++ ++ + + + ++ + Y H
Sbjct: 75 YDVITTPTDIVMVIEY------AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAH----NGK 532
I H LK N+LLD + + D+ L ++ N L + SP YA NGK
Sbjct: 129 ----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVINGK 182
Query: 533 ISK--KSDVWSLGILILELLTGKYP 555
+ + DVWS GI++ +L G+ P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 125
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 126 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 183 KVDLWSLGVLCYEFLVGKPP 202
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 74
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 132
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 133 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q G+ ++ + +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 92
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 150
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 151 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 85
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 143
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 144 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 77
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 135
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 136 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 73
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 131
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 132 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 135 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 81
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 139
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 140 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 141 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 133 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVV-------KRYKQMNNVGREDFQEHIKRLGRLEHPNL 413
+ LG G F YK N V R + + + R +E IK L L HPN+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE-IKLLQELSHPNI 74
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK-IIKGVVKGMAYL 472
+ L + K L+++F+E L + N P + +K + ++G+ YL
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTP-----SHIKAYMLMTLQGLEYL 128
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEYA 528
H I H LK +N+LLD + L D+ L + +P+ A+ V Y++PE
Sbjct: 129 HQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 529 HNGKI-SKKSDVWSLGILILELL 550
++ D+W++G ++ ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 353 QDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHP 411
Q++ +V+G+G+FG Y+ + +G+ +K+ Q + Q I R +L+H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ--IMR--KLDHC 85
Query: 412 NLLPLTAFYYRKEEKL------LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGV 465
N++ L F+Y EK L+ ++V H + KQ + + +L + + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-L 143
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDY-ALRPLIN--PDNAHTLMVA 521
+ +AY+H+ I H +K N+LLD L L D+ + + L+ P+ +
Sbjct: 144 FRSLAYIHS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 522 YKSPEYAHNGKISKKS-DVWSLGILILELLTGK 553
Y++PE S DVWS G ++ ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 133 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 153 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 131 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 135 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 138 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 139 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 130 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 131 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 133 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 30/216 (13%)
Query: 361 EVLGSGTFGASYKTVI------SNGQAYVVKRYK-QMNNVGREDFQEHIKRLGRLEHPNL 413
E LG FG YK + QA +K K + RE+F+ RL+HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSL------------AGKLHANHTKQRPGLDWQTRLKI 461
+ L + + +++ + +G L G + T + L+ + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT-VKSALEPPDFVHL 133
Query: 462 IKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-- 519
+ + GM YL + + H L + NVL+ ++D L + + + L+
Sbjct: 134 VAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 520 ----VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE GK S SD+WS G+++ E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 133 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 30/216 (13%)
Query: 361 EVLGSGTFGASYKTVI------SNGQAYVVKRYK-QMNNVGREDFQEHIKRLGRLEHPNL 413
E LG FG YK + QA +K K + RE+F+ RL+HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSL------------AGKLHANHTKQRPGLDWQTRLKI 461
+ L + + +++ + +G L G + T + L+ + +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV-KSALEPPDFVHL 150
Query: 462 IKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-- 519
+ + GM YL + + H L + NVL+ ++D L + + + L+
Sbjct: 151 VAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 520 ----VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE GK S SD+WS G+++ E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 336 DYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGR 395
D G + M+ ++++ LG G +G Y V V + + + +
Sbjct: 13 DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV 72
Query: 396 EDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
E+F + + ++HPNL+ L + ++ E++ G+L L + ++ +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV-- 130
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN- 514
L + + M YL + + I H L + N L+ + + D+ L L+ D
Sbjct: 131 -VLLYMATQISSAMEYLEKK---NFI-HRDLAARNCLVGENHVVKVADFGLSRLMTGDTY 185
Query: 515 -AHT---LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYD 564
AH + + +PE S KSDVW+ G+L+ E+ T YP L Q YD
Sbjct: 186 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV-VKRYKQMNNVGREDFQEH-IKRLGRLEHPNLLPLTA 418
+VLG+G F Q V +K + G+E E+ I L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 419 FYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
Y L+ + V G L ++ +T++ ++I V+ + YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 477 PGSIIPHGHLKSSNVL---LDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHN 530
I H LK N+L LD + +++D+ L + +P + + Y +PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 531 GKISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 137 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 138 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G + +L ++ D Q I + ++Y H++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 153 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 360 AEVLGSGTFGASYKTVIS----NGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEH 410
+ LG GTFG K I G VK + + ++ VG+ + I+ L H
Sbjct: 16 GDTLGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRH 70
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P+++ L + ++ E+V G L + H + + + R ++ + ++ +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVE---EMEAR-RLFQQILSAVD 125
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHN 530
Y H + + H LK NVLLD + D+ L +++ + L + SP YA
Sbjct: 126 YCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAP 179
Query: 531 GKISKK------SDVWSLGILILELLTGKYP 555
IS + D+WS G+++ LL G P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 352 LQDMLRASAEVLGSGTFGASYKTVISNGQA-YVVKRYKQMNNVGREDFQEHIKRLGRLEH 410
L D +E LG G Y+ Q Y +K K+ V ++ + I L RL H
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSH 107
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKL-HANHTKQRPGLDWQTRLKIIKGVVKGM 469
PN++ L + E L+ E V G L ++ + +R D +K +++ +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD------AVKQILEAV 161
Query: 470 AYLHNELPGSIIPHGHLKSSNVLLDRSF--EPL-LTDYALRPLINPDNAHTLMV------ 520
AYLH + I H LK N+L PL + D+ L ++ H +++
Sbjct: 162 AYLHE----NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE----HQVLMKTVCGT 213
Query: 521 -AYKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE + D+WS+GI+ LL G P
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHI--KRLGRL--EHPNLLP 415
++LG G+FG + Q + +K K+ + +D + + KR+ L EHP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + KE + E++ G L + + H D ++ G+ +LH++
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHSK 137
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNG 531
I + LK N+LLD+ + D+ + +A T Y +PE
Sbjct: 138 ----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
K + D WS G+L+ E+L G+ P
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 135 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+LL+ + + + D+ L + +PD+ HT +
Sbjct: 133 ILRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 130
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + ++ + P + T + Y PE +
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 187
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 188 KVDLWSLGVLCYEFLVGKPP 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV-VKRYKQMNNVGREDFQEH-IKRLGRLEHPNLLPLTA 418
+VLG+G F Q V +K + G+E E+ I L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 419 FYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
Y L+ + V G L ++ +T++ ++I V+ + YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 477 PGSIIPHGHLKSSNVL---LDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHN 530
I H LK N+L LD + +++D+ L + +P + + Y +PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 531 GKISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 33/230 (14%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQM---NNVGREDFQEHIKR---LGRLEHPNLLP 415
+LG G FG+ + + VK +M + + D +E ++ + +HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 416 LTAFYYRKEEK------LLLYEFVENGSLAGKLHANHTKQRP-GLDWQTRLKIIKGVVKG 468
L R K +++ F+++G L L A+ + P L QT ++ + + G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPD-----NAHTLMVAY 522
M YL + + I H L + N +L + D+ L R + + D A L V +
Sbjct: 150 MEYLSSR---NFI-HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLT-GKYP---------ENYLLQG 562
+ E + + SDVW+ G+ + E++T G+ P NYL+ G
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV-VKRYKQMNNVGREDFQEH-IKRLGRLEHPNLLPLTA 418
+VLG+G F Q V +K + G+E E+ I L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 419 FYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
Y L+ + V G L ++ +T++ ++I V+ + YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 477 PGSIIPHGHLKSSNVL---LDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHN 530
I H LK N+L LD + +++D+ L + +P + + Y +PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 531 GKISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV-VKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
+VLG+G F Q V +K + G+E + I L +++HPN++ L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 419 FYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
Y L+ + V G L ++ +T++ ++I V+ + YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 477 PGSIIPHGHLKSSNVL---LDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHN 530
I H LK N+L LD + +++D+ L + +P + + Y +PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 531 GKISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHI--K 403
+E F+L ML G G+FG + Q + +K K+ + +D + + K
Sbjct: 17 IEDFELHKML-------GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 404 RLGRL--EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKI 461
R+ L EHP L + + KE + E++ G L + + H D
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFY 124
Query: 462 IKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA 521
++ G+ +LH++ I + LK N+LLD+ + D+ + +A T
Sbjct: 125 AAEIILGLQFLHSK----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC 180
Query: 522 ----YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE K + D WS G+L+ E+L G+ P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
V KGMA+L ++ + I H L + N+LL + D+ L I D+ + L
Sbjct: 177 VAKGMAFLASK---NCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYPENYLLQGYDSKASLSNWVNNMV 577
V + +PE N + +SDVWS GI + EL + G P Y DSK M+
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPVDSK------FYKMI 284
Query: 578 KEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
KE M +++ +EM +++K +C + D L R K++++ IE+
Sbjct: 285 KE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 130
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 188 KVDLWSLGVLCYEFLVGKPP 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 361 EVLGSGTFGASY--KTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
EVLGSG F + K ++ G+ + +K K+ + I L +++H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 419 FYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
Y L+ + V G L ++ +T++ L +I+ V+ + YLH
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHE-- 124
Query: 477 PGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLM--VAYKSPEYAHNG 531
+ I H LK N+L + + + ++TD+ L + T Y +PE
Sbjct: 125 --NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK 182
Query: 532 KISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 183 PYSKAVDCWSIGVITYILLCG-YPPFY 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 154
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL--MVAYKSPEYAHNGKISKK 536
+ H +K N+LL + E + D+ L + Y PE +K
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 537 SDVWSLGILILELLTGKYP 555
D+WSLG+L E L GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 30/185 (16%)
Query: 408 LEHPNLLPLTAFYYRKEE---KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
L H N++ FY + E + L E+ G L ++ + P +
Sbjct: 61 LNHENVV---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQ 112
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM----- 519
++ G+ YLH G I H +K N+LLD ++D+ L + +N L+
Sbjct: 113 LMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 520 -VAYKSPEYAHNGKI-SKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMV 577
+ Y +PE + ++ DVWS GI++ +L G+ P + Q DS S+W
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD---QPSDSCQEYSDW----- 220
Query: 578 KEKRT 582
KEK+T
Sbjct: 221 KEKKT 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
V KGMA+L ++ + I H L + N+LL + D+ L I D+ + L
Sbjct: 170 VAKGMAFLASK---NCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYPENYLLQGYDSKASLSNWVNNMV 577
V + +PE N + +SDVWS GI + EL + G P Y DSK M+
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPVDSK------FYKMI 277
Query: 578 KEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
KE M +++ +EM +++K +C + D L R K++++ IE+
Sbjct: 278 KEGF-------RMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 320
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
V KGMA+L ++ + I H L + N+LL + D+ L I D+ + L
Sbjct: 154 VAKGMAFLASK---NCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYPENYLLQGYDSKASLSNWVNNMV 577
V + +PE N + +SDVWS GI + EL + G P Y DSK M+
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPVDSK------FYKMI 261
Query: 578 KEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
KE M +++ +EM +++K +C + D L R K++++ IE+
Sbjct: 262 KEGF-------RMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
EV G FG +K + N YV + + + + + L ++H N+L
Sbjct: 30 EVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 421 YRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
R + L+ F E GSL+ L AN + W I + + +G+AYLH ++
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDI 141
Query: 477 PG------SIIPHGHLKSSNVLLDRSFEPLLTDYAL 506
PG I H +KS NVLL + + D+ L
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + ++ + P + T + Y PE +
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 346 DMEPFDLQDMLRASAEVLGSGTFG----ASYKTVISN-GQAYVVKRYKQMNNVGR-EDFQ 399
+++P + LG G FG Y N G+ VK K + D +
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK 71
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
+ I+ L L H N++ L+ EF+ +GSL L N K ++ +
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQ 127
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT 517
+LK + KGM YL + H L + NVL++ + + D+ L I D
Sbjct: 128 QLKYAVQICKGMDYLGSRQ----YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 518 LM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ V + +PE K SDVWS G+ + ELLT
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 336 DYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAYVVKRYKQMNNVG 394
D L+ V+D + P + ++ S V+G G FG Y I Q + K ++ +
Sbjct: 4 DSALLAEVKDVLIPHE--RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT 61
Query: 395 REDFQEHIKRLGRL----EHPNLLPLTAFYYRKEE-KLLLYEFVENGSLAGKLHANHTKQ 449
E R G L HPN+L L E +L ++ +G L L + Q
Sbjct: 62 EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL---LQFIRSPQ 118
Query: 450 R-PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-R 507
R P + + + V +GM YL + H L + N +LD SF + D+ L R
Sbjct: 119 RNPTV--KDLISFGLQVARGMEYLAEQK----FVHRDLAARNCMLDESFTVKVADFGLAR 172
Query: 508 PLINPD------NAHT-LMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLL 560
+++ + + H L V + + E + + KSDVWS G+L+ ELLT P +
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
Query: 561 QGYDSKASLSNWVNNMVKEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARME 620
+D L+ + + +Y + +++ C E D R
Sbjct: 233 DPFDLTHFLAQ---------------GRRLPQPEYCPDSLYQVMQ---QCWEADPAVRPT 274
Query: 621 LKEVIEKIERL 631
+ ++ ++E++
Sbjct: 275 FRVLVGEVEQI 285
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 128
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
V KGMA+L ++ + I H L + N+LL + D+ L I D+ + L
Sbjct: 177 VAKGMAFLASK---NCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYPENYLLQGYDSKASLSNWVNNMV 577
V + +PE N + +SDVWS GI + EL + G P Y DSK M+
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPVDSK------FYKMI 284
Query: 578 KEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
KE M +++ +EM +++K +C + D L R K++++ IE+
Sbjct: 285 KEGF-------RMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
V KGMA+L ++ + I H L + N+LL + D+ L I D+ + L
Sbjct: 172 VAKGMAFLASK---NCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYPENYLLQGYDSKASLSNWVNNMV 577
V + +PE N + +SDVWS GI + EL + G P Y DSK M+
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPVDSK------FYKMI 279
Query: 578 KEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
KE M +++ +EM +++K +C + D L R K++++ IE+
Sbjct: 280 KEGF-------RMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 322
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + + Y PE +
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLE---HPNLLPLTA 418
LG G +G K + +GQ VKR + N QE + L L+ P T
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-----QEQKRLLMDLDISMRTVDCPFTV 69
Query: 419 FYY----RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
+Y R+ + + E ++ K + + + KI +VK + +LH+
Sbjct: 70 TFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYK--------SPE 526
+L S+I H +K SNVL++ + + D+ + + D A + K +PE
Sbjct: 128 KL--SVI-HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184
Query: 527 YAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKE 579
G S KSD+WSLGI ++EL ++P YDS + + +V+E
Sbjct: 185 LNQKG-YSVKSDIWSLGITMIELAILRFP-------YDSWGTPFQQLKQVVEE 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYV-VKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G G FG + + V VK ++ + + F + + L + HPN++ L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+K+ ++ E V+ G L + R +T L+++ GM YL ++
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGMEYLESK-- 232
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKSPEYAHNG 531
H L + N L+ ++D+ + R + A + + V + +PE + G
Sbjct: 233 --CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 532 KISKKSDVWSLGILILELLT 551
+ S +SDVWS GIL+ E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 44/251 (17%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIK 403
DD+EP LG G +G K + +GQ VKR + N QE +
Sbjct: 51 DDLEPI----------MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-----QEQKR 95
Query: 404 RLGRLE---HPNLLPLTAFYY----RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ 456
L L+ P T +Y R+ + + E ++ K + + +
Sbjct: 96 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPED 153
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH 516
KI +VK + +LH++L S+I H +K SNVL++ + + D+ + + A
Sbjct: 154 ILGKIAVSIVKALEHLHSKL--SVI-HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210
Query: 517 TLMVAYK--------SPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKAS 568
T+ K +PE G S KSD+WSLGI ++EL ++P YDS +
Sbjct: 211 TIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP-------YDSWGT 262
Query: 569 LSNWVNNMVKE 579
+ +V+E
Sbjct: 263 PFQQLKQVVEE 273
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 362 VLGSGTFG-ASYKTVISNGQAYVVKRYK-----QMNNVGREDFQEHIKRLGRLEHPNLLP 415
VLG G+FG V G Y VK K Q ++V ++ I L R HP L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQ 88
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L + + + EFV G L + K R + + R + ++ + +LH++
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQ----KSRRFDEARARFYAAE-IISALMFLHDK 143
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTLMVA--YKSPEYAHNG 531
II + LK NVLLD L D+ + + N T Y +PE
Sbjct: 144 ---GII-YRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
D W++G+L+ E+L G P
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + + V +Y + E+ Q I L HPN++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H+
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEAR-----------FFFQQLLSGVSYCHSMQ 136
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLT----DYALRPLINPDNAHTLMV-AYKSPEY---- 527
I H LK N LLD S P L Y+ +++ T+ AY +PE
Sbjct: 137 ----ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GKI+ DVWS G+ + +L G YP
Sbjct: 193 EYDGKIA---DVWSCGVTLYVMLVGAYP 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR-- 131
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL--MVAYKSPEYAHNGKISKK 536
+ H +K N+LL + E + D+ L + Y PE +K
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 537 SDVWSLGILILELLTGKYP 555
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 363 LGSGTFGASYKTVI-SNGQAYVVKRYKQMNNVGREDFQEHIKR--------LGRLEHPNL 413
+GSGT G +K G VK+ ++ N +E KR L + P +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN------KEENKRILMDLDVVLKSHDCPYI 86
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL--KIIKGVVKGMAY 471
+ + + + E + G+ A KL P R+ K+ +VK + Y
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIP-----ERILGKMTVAIVKALYY 139
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL---MVAYKSPEYA 528
L E G I H +K SN+LLD + L D+ + + D A AY +PE
Sbjct: 140 L-KEKHGVI--HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 529 HNGKISK-----KSDVWSLGILILELLTGKYP 555
+K ++DVWSLGI ++EL TG++P
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL-EHPNLLPLTA 418
E +G G++ + V + Y VK + + + D E I+ L R +HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVK----VIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
Y + L+ E + G L K+ +Q+ + + ++ + K + YLH++
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKI----LRQKFFSEREASF-VLHTIGKTVEYLHSQG-- 141
Query: 479 SIIPHGHLKSSNVL-LDRSFEP---LLTDYALRPLINPDNAHTLMVAYKS----PEYAHN 530
+ H LK SN+L +D S P + D+ + +N + Y + PE
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
+ D+WSLGIL+ +L G P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL-EHPNLLPLTA 418
E +G G++ + V + Y VK + + + D E I+ L R +HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVK----VIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
Y + L+ E + G L K+ +Q+ + + ++ + K + YLH++
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKI----LRQKFFSEREASF-VLHTIGKTVEYLHSQG-- 141
Query: 479 SIIPHGHLKSSNVL-LDRSFEP---LLTDYALRPLINPDNAHTLMVAYKS----PEYAHN 530
+ H LK SN+L +D S P + D+ + +N + Y + PE
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
+ D+WSLGIL+ +L G P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 39/248 (15%)
Query: 361 EVLGSGTFGASYKTVISN----GQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPN 412
E LG GTF +K V GQ + ++K + + E F E + +L H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L+ + +E +L+ EFV+ GSL L N K + W+ V K +A+
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLE------VAKQLAWA 125
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFE------PL--LTDYALRPLINPDNAHTLMVAYKS 524
+ L + + HG++ + N+LL R + P L+D + + P + + +
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 525 PEYAHNGK-ISKKSDVWSLGILILELLT-GKYPENYL-----LQGYDSK--------ASL 569
PE N K ++ +D WS G + E+ + G P + L LQ Y+ + A L
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAEL 245
Query: 570 SNWVNNMV 577
+N +NN +
Sbjct: 246 ANLINNCM 253
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM 519
KI VK + +L L I H +K SN+LLDRS L D+ + + A T
Sbjct: 129 KITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD 185
Query: 520 VA---YKSPEY----AHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE A +SDVWSLGI + EL TG++P
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYV-VKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G G FG + + V VK ++ + + F + + L + HPN++ L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+K+ ++ E V+ G L + R +T L+++ GM YL ++
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGMEYLESK-- 232
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRP------LINPDNAHTLMVAYKSPEYAHNG 531
H L + N L+ ++D+ + + V + +PE + G
Sbjct: 233 --CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 532 KISKKSDVWSLGILILELLT 551
+ S +SDVWS GIL+ E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--- 521
+++G+ Y+H+ + + H LK SN+L++ + + + D+ L + +P++ HT +
Sbjct: 153 ILRGLKYIHS----ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 522 ----YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
Y++PE N K +K D+WS+G ++ E+L+ +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 23/220 (10%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFG----ASYKTVISN-GQAYVVKRYKQMNNVGR-EDFQE 400
++P + LG G FG Y N G+ VK K + D ++
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTR 458
I+ L L H N++ L+ EF+ +GSL L N K ++ + +
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQ 116
Query: 459 LKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL 518
LK + KGM YL + H L + NVL++ + + D+ L I D
Sbjct: 117 LKYAVQICKGMDYLGSRQ----YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 519 M-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ V + +PE K SDVWS G+ + ELLT
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 19/204 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ--EHIKRLGR-LEHPNLLPLT 417
E LG G F + V + + DFQ E R+ R L+HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A R I+ +++ +AY H+
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS--- 146
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H +LK N+LL + L D+ L +N A Y SPE
Sbjct: 147 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
SK D+W+ G+++ LL G YP
Sbjct: 206 PYSKPVDIWACGVILYILLVG-YP 228
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHSKR-- 132
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNGKISK 535
+ H +K N+LL + E + D+ + P + T + Y PE +
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 536 KSDVWSLGILILELLTGKYP 555
K D+WSLG+L E L G P
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 51/304 (16%)
Query: 363 LGSGTFGASYKTVISNGQAY------VVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLP 415
+G G FG ++ Y VK K+ + + DFQ + ++PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKL------------HAN-HTKQR------PGLDWQ 456
L + LL+E++ G L L H++ T+ R P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI------ 510
+L I + V GMAYL H L + N L+ + + D+ L I
Sbjct: 175 EQLCIARQVAAGMAYLSERK----FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 511 NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
D + + + PE + + +SDVW+ G+++ E+ + Y LQ Y A
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS------YGLQPYYGMAH-- 282
Query: 571 NWVNNMVKEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKIER 630
++ R G++ + + E+ NL+++ S D + + +++++
Sbjct: 283 ---EEVIYYVRDGNI----LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
Query: 631 LKEG 634
EG
Sbjct: 336 RAEG 339
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ--EHIKRLGR-LEHPNLLPLT 417
E LG G F + V + + DFQ E R+ R L+HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ +AY H+
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHS--- 123
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H +LK N+LL + L D+ L +N A Y SPE
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
SK D+W+ G+++ LL G YP
Sbjct: 183 PYSKPVDIWACGVILYILLVG-YP 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 19/202 (9%)
Query: 363 LGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LGSG +G K + ++K+ + + L +L+HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ K L+ E G L ++ R I+K V+ G YLH
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIIL-----RQKFSEVDAAVIMKQVLSGTTYLHKH--- 123
Query: 479 SIIPHGHLKSSNVLLD-RSFEPL--LTDYALRPL--INPDNAHTLMVAYKSPEYAHNGKI 533
I H LK N+LL+ +S + L + D+ L + L AY K
Sbjct: 124 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 182
Query: 534 SKKSDVWSLGILILELLTGKYP 555
+K DVWS G+++ LL G YP
Sbjct: 183 DEKCDVWSCGVILYILLCG-YP 203
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 15/186 (8%)
Query: 378 NGQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPNLLPLTAFYYR--KEEKLLLYEFV 433
G VVK K + R+ DF E RL HPN+LP+ L+ ++
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWM 91
Query: 434 ENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLL 493
GSL LH +D +K + +GMA+LH P +IP L S +V++
Sbjct: 92 PYGSLYNVLHEGTNFV---VDQSQAVKFALDMARGMAFLHTLEP--LIPRHALNSRSVMI 146
Query: 494 DRSFEPLLTDYALR-PLINPDNAHTLMVAYKSPEYAH---NGKISKKSDVWSLGILILEL 549
D ++ ++ +P + A+ +PE + +D+WS +L+ EL
Sbjct: 147 DEDMTARISMADVKFSFQSPGRMYA--PAWVAPEALQKKPEDTNRRSADMWSFAVLLWEL 204
Query: 550 LTGKYP 555
+T + P
Sbjct: 205 VTREVP 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ--EHIKRLGR-LEHPNLLPLT 417
E LG G F + V + + DFQ E R+ R L+HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ +AY H+
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHS--- 122
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H +LK N+LL + L D+ L +N A Y SPE
Sbjct: 123 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
SK D+W+ G+++ LL G YP
Sbjct: 182 PYSKPVDIWACGVILYILLVG-YP 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 396 EDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAG------KLHANHTKQ 449
+DF+ ++ + +++ L +E ++YE++EN S+ L N+T
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDY----- 504
P Q IIK V+ +Y+HNE I H +K SN+L+D++ L+D+
Sbjct: 148 IP---IQVIKCIIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 505 -ALRPLINPDNAHTLM-VAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ + + M + S E ++NG K D+WSLGI + + P
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNG---AKVDIWSLGICLYVMFYNVVP 251
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ--EHIKRLGR-LEHPNLLPLT 417
E LG G F + V + + DFQ E R+ R L+HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ +AY H+
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHS--- 123
Query: 478 GSIIPHGHLKSSNVLLD---RSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ I H +LK N+LL + L D+ L +N A Y SPE
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
SK D+W+ G+++ LL G YP
Sbjct: 183 PYSKPVDIWACGVILYILLVG-YP 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 363 LGSGTFGASYKTVISNGQ---AYVVKRYKQMNNVGRE-DFQEHIKRLGRLEHPNLLPLTA 418
LG G FG Y + A V Q+ G E + ++ L HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+++ L+ E+ G++ +L ++ D Q I + ++Y H++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHSKR-- 132
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL--MVAYKSPEYAHNGKISKK 536
+ H +K N+LL + E + D+ TL + Y PE +K
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 537 SDVWSLGILILELLTGKYP 555
D+WSLG+L E L G P
Sbjct: 191 VDLWSLGVLCYEFLVGMPP 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALR- 507
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 MK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 161
Query: 508 --PLINPDNAHTLMVAYKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N +A Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K K+ V +++ + + L HP L
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 72 TAL-KYSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLH 126
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+E + + LK N++LD+ +TD+ L D A Y +PE
Sbjct: 127 SE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 23/233 (9%)
Query: 335 ADYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVI-SNGQAYVVKRYKQMNNV 393
D G + ME F+ + +++ LG G F + + S GQ Y K K+
Sbjct: 11 VDLGTENLYFQSMENFN--NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR- 67
Query: 394 GREDFQEHIKRLGRLE----HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQ 449
G++ E + + LE P ++ L Y E +L+ E+ G + +
Sbjct: 68 GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM 127
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL----LTDYA 505
D +++IK +++G+ YLH + I H LK N+LL S PL + D+
Sbjct: 128 VSEND---VIRLIKQILEGVYYLHQ----NNIVHLDLKPQNILLS-SIYPLGDIKIVDFG 179
Query: 506 L-RPLINPDNAHTLMVA--YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ R + + +M Y +PE + I+ +D+W++GI+ LLT P
Sbjct: 180 MSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K K+ V +++ + + L HP L
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 71 TAL-KYSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLH 125
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+E + + LK N++LD+ +TD+ L D A Y +PE
Sbjct: 126 SE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 19/202 (9%)
Query: 363 LGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LGSG +G K + ++K+ + + L +L+HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ K L+ E G L ++ R I+K V+ G YLH
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIIL-----RQKFSEVDAAVIMKQVLSGTTYLHKH--- 140
Query: 479 SIIPHGHLKSSNVLLD-RSFEPL--LTDYALRPL--INPDNAHTLMVAYKSPEYAHNGKI 533
I H LK N+LL+ +S + L + D+ L + L AY K
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 199
Query: 534 SKKSDVWSLGILILELLTGKYP 555
+K DVWS G+++ LL G YP
Sbjct: 200 DEKCDVWSCGVILYILLCG-YP 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K K+ V +++ + + L HP L
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 73 TAL-KYSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLH 127
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+E + + LK N++LD+ +TD+ L D A Y +PE
Sbjct: 128 SE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 39/248 (15%)
Query: 361 EVLGSGTFGASYKTVISN----GQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPN 412
E LG GTF +K V GQ + ++K + + E F E + +L H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L+ +E +L+ EFV+ GSL L N K + W +L++ K + M +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINILW--KLEVAKQLAAAMHFL 129
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFE------PL--LTDYALRPLINPDNAHTLMVAYKS 524
+ + HG++ + N+LL R + P L+D + + P + + +
Sbjct: 130 EE----NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 525 PEYAHNGK-ISKKSDVWSLGILILELLT-GKYPENYL-----LQGYDSK--------ASL 569
PE N K ++ +D WS G + E+ + G P + L LQ Y+ + A L
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAEL 245
Query: 570 SNWVNNMV 577
+N +NN +
Sbjct: 246 ANLINNCM 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 32/213 (15%)
Query: 363 LGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGR-------EDFQEHIKRLGRLEHPNLL 414
+G G FG +K ++ + +K ++ G ++FQ + + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L + ++ EFV G L +L K P + W +L+++ + G+ Y+ N
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHP-IKWSVKLRLMLDIALGIEYMQN 140
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFE--PL---LTDYALRPLINPDNAHTLM-----VAYKS 524
+ P I H L+S N+ L E P+ + D++L + + H++ + +
Sbjct: 141 QNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQQSVHSVSGLLGNFQWMA 194
Query: 525 PEY--AHNGKISKKSDVWSLGILILELLTGKYP 555
PE A ++K+D +S +++ +LTG+ P
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAY---VVKRYKQMNNVGREDFQEHI 402
++P ++ +R LG G F Y+ T + + + VV + + +E I
Sbjct: 36 VDPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI 93
Query: 403 KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKII 462
L++P+++ F+ + ++ E SL +LH K+R + +
Sbjct: 94 AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELH----KRRKAVTEPEARYFM 148
Query: 463 KGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA- 521
+ ++G+ YLHN + + H LK N+ L+ + + D+ L I D +
Sbjct: 149 RQTIQGVQYLHN----NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG 204
Query: 522 ---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE S + D+WSLG ++ LL GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAY---VVKRYKQMNNVGREDFQEHI 402
++P ++ +R LG G F Y+ T + + + VV + + +E I
Sbjct: 36 VDPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI 93
Query: 403 KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKII 462
L++P+++ F+ + ++ E SL +LH K+R + +
Sbjct: 94 AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELH----KRRKAVTEPEARYFM 148
Query: 463 KGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA- 521
+ ++G+ YLHN + + H LK N+ L+ + + D+ L I D +
Sbjct: 149 RQTIQGVQYLHN----NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG 204
Query: 522 ---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE S + D+WSLG ++ LL GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 346 DMEPFDLQDMLRASAEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEH 401
DME F E +G GT+G YK G+ +K+ + + V +E
Sbjct: 5 DMENFQ-------KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE- 56
Query: 402 IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKI 461
I L L HPN++ L + + + L++EF+ L + A+ P L +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPL 108
Query: 462 IKG----VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH 516
IK +++G+A+ H+ + H LK N+L++ L D+ L R P +
Sbjct: 109 IKSYLFQLLQGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 517 TLMVA---YKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
T V Y++PE K S D+WSLG + E++T +
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H L + N ++ F + D+ + R + D L V + +
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 361 EVLGSGTFGASY--KTVISNGQAYVVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLLPLT 417
+ LG G FG + K + + Y +KR + N + RE +K L +LEHP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 418 AFYYRKE--EKLL-----LYEFVENGSLAGKLHANHTKQRPGLDWQTR---LKIIKGVVK 467
+ K EKL +Y +++ + + R ++ + R L I + +
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA------------ 515
+ +LH++ + H LK SN+ + D+ L ++ D
Sbjct: 130 AVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 516 -HTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
HT V Y SPE H S K D++SLG+++ ELL YP
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H L + N ++ F + D+ + R + D L V + +
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 36/235 (15%)
Query: 340 LSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAYVVKRYKQMNNVG--RE 396
LS +RD F+L E++G+GT+G YK + GQ +K M+ G E
Sbjct: 16 LSALRDPAGIFEL-------VELVGNGTYGQVYKGRHVKTGQLAAIK---VMDVTGDEEE 65
Query: 397 DFQEHIKRLGRL-EHPNLLPLTAFYYRK------EEKLLLYEFVENGSLAGKLHANHTKQ 449
+ ++ I L + H N+ + +K ++ L+ EF GS+ L N
Sbjct: 66 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT-DLIKNTKGN 124
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA---- 505
+W I + +++G+++LH + H +K NVLL + E L D+
Sbjct: 125 TLKEEWIAY--ICREILRGLSHLHQHK----VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 506 LRPLINPDNAHTLMVAYKSPEYAH-----NGKISKKSDVWSLGILILELLTGKYP 555
L + N + +PE + KSD+WSLGI +E+ G P
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ-------EHIKRLGRLEHPNLLP 415
+G G +G YK + +V + ++ N G E ++RL EHPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 416 L-----TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L T+ R+ + L++E V+ L L PGL +T +++ ++G+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD---KAPPPGLPAETIKDLMRQFLRGLD 126
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEY 527
+LH + I H LK N+L+ L D+ L + + A +V Y++PE
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 528 AHNGKISKKSDVWSLGILILELLTGK 553
+ D+WS+G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 MK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 161
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 MK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 161
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 42/250 (16%)
Query: 345 DDMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQEHIK 403
DD+EP LG G +G K + +GQ VKR + N QE +
Sbjct: 34 DDLEPI----------XELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS-----QEQKR 78
Query: 404 RLGRLE---HPNLLPLTAFYY---RKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
L L+ P T +Y +E + + + + SL K + + +
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSL-DKFYKQVIDKGQTIPEDI 137
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT 517
KI +VK + +LH++L S+I H +K SNVL++ + D+ + + D A
Sbjct: 138 LGKIAVSIVKALEHLHSKL--SVI-HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 518 LMVAYK--------SPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASL 569
+ K +PE G S KSD+WSLGI +EL ++P YDS +
Sbjct: 195 IDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFP-------YDSWGTP 246
Query: 570 SNWVNNMVKE 579
+ +V+E
Sbjct: 247 FQQLKQVVEE 256
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K K+ V +++ + + L HP L
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 211 TAL-KYSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLH 265
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+E + + LK N++LD+ +TD+ L D A Y +PE
Sbjct: 266 SE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 MK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 161
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHI---------KRLGRLEHPNL 413
+G G +G YK + +V + ++ N G I +RL EHPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 414 LPL-----TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+ L T+ R+ + L++E V+ L L PGL +T +++ ++G
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD---KAPPPGLPAETIKDLMRQFLRG 132
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSP 525
+ +LH + I H LK N+L+ L D+ L + + A T +V Y++P
Sbjct: 133 LDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGK 553
E + D+WS+G + E+ K
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKR-----LGRLEHPNLLP 415
+V+G G+FG + + + Q + ++ ++HI L ++HP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L F ++ +KL FV + G+L + ++R L+ + R + + + YLH+
Sbjct: 104 L-HFSFQTADKLY---FVLDYINGGELFYHLQRERCFLEPRARFYAAE-IASALGYLHS- 157
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNG 531
I + LK N+LLD +LTD+ L N+ T Y +PE H
Sbjct: 158 ---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
+ D W LG ++ E+L G P
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H L + N ++ F + D+ + R + D L V + +
Sbjct: 142 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 362 VLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNLL 414
+LG GTFG K ++ + G+ Y +K K+ V +++ + + L HP L
Sbjct: 158 LLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 214
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L + ++ ++L FV + G+L + +++R + + R + +V + YLH+
Sbjct: 215 AL-KYSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHS 269
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
E + + LK N++LD+ +TD+ L D A Y +PE +
Sbjct: 270 E---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 326
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
+ D W LG+++ E++ G+ P
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 363 LGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGR-------EDFQEHIKRLGRLEHPNLL 414
+G G FG +K ++ + +K ++ G ++FQ + + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L + ++ EFV G L +L K P + W +L+++ + G+ Y+ N
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHP-IKWSVKLRLMLDIALGIEYMQN 140
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFE--PL---LTDYALRPLINPDNAHTLM-----VAYKS 524
+ P I H L+S N+ L E P+ + D+ L + + H++ + +
Sbjct: 141 QNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMA 194
Query: 525 PEY--AHNGKISKKSDVWSLGILILELLTGKYP 555
PE A ++K+D +S +++ +LTG+ P
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 125
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 126 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
E+ G FG +K + N VK + + + +E G ++H NLL A
Sbjct: 21 EIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPG-MKHENLLQFIAAE 78
Query: 421 YR----KEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
R + E L+ F + GSL L N + W + + + +G++YLH ++
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHEDV 132
Query: 477 PGS-------IIPHGHLKSSNVLLDRSFEPLLTDYAL----RPLINPDNAHTLMVA--YK 523
P I H KS NVLL +L D+ L P P + H + Y
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 524 SPEYAHNGKISKKS------DVWSLGILILELLT 551
+PE G I+ + D++++G+++ EL++
Sbjct: 193 APEVL-EGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 119
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 120 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAY---VVKRYKQMNNVGREDFQEHI 402
++P ++ +R LG G F Y+ T + + + VV + + +E I
Sbjct: 20 VDPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI 77
Query: 403 KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKII 462
L++P+++ F+ + ++ E SL +LH K+R + +
Sbjct: 78 AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELH----KRRKAVTEPEARYFM 132
Query: 463 KGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA- 521
+ ++G+ YLHN + + H LK N+ L+ + + D+ L I D +
Sbjct: 133 RQTIQGVQYLHN----NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG 188
Query: 522 ---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE S + D+WSLG ++ LL GK P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQT 457
F+ + +L H N++ + + L+ E++E +L+ + + L T
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS-----EYIESHGPLSVDT 112
Query: 458 RLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN----PD 513
+ ++ G+ + H+ I H +K N+L+D + + D+ + ++
Sbjct: 113 AINFTNQILDGIKHAHDMR----IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 514 NAHTL-MVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYPEN 557
H L V Y SPE A + +D++S+GI++ E+L G+ P N
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ-------EHIKRLGRLEHPNLLP 415
+G G +G YK + +V + ++ N G E ++RL EHPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 416 L-----TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L T+ R+ + L++E V+ L L PGL +T +++ ++G+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD---KAPPPGLPAETIKDLMRQFLRGLD 126
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEY 527
+LH + I H LK N+L+ L D+ L + + A +V Y++PE
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 528 AHNGKISKKSDVWSLGILILELLTGK 553
+ D+WS+G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 125
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 126 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 347 MEPFDLQDMLRASAEVLGSGTFGASYK-TVISNGQAY---VVKRYKQMNNVGREDFQEHI 402
++P ++ +R LG G F Y+ T + + + VV + + +E I
Sbjct: 36 VDPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI 93
Query: 403 KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKII 462
L++P+++ F+ + ++ E SL +LH K+R + +
Sbjct: 94 AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELH----KRRKAVTEPEARYFM 148
Query: 463 KGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA- 521
+ ++G+ YLHN + + H LK N+ L+ + + D+ L I D +
Sbjct: 149 RQTIQGVQYLHN----NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG 204
Query: 522 ---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
Y +PE S + D+WSLG ++ LL GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 27/212 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTAFY 420
LG G+FG ++ G VK+ + E F+ E + L P ++PL
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+ E +E GSL G+L K++ L L + ++G+ YLH+
Sbjct: 155 REGPWVNIFMELLEGGSL-GQL----VKEQGCLPEDRALYYLGQALEGLEYLHSRR---- 205
Query: 481 IPHGHLKSSNVLLDR-SFEPLLTDYALRPLINPDN-AHTLMVA--------YKSPEYAHN 530
I HG +K+ NVLL L D+ + PD +L+ + +PE
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 531 GKISKKSDVWSLGILILELLTGKYPENYLLQG 562
K DVWS ++L +L G +P +G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + V +Y + E+ + I L HPN++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEAR-----------FFFQQLISGVSYCH--- 132
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLT----DYALRPLINPDNAHTLMV-AYKSPEY---- 527
+ H LK N LLD S P L Y+ +++ T+ AY +PE
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GK++ DVWS G+ + +L G YP
Sbjct: 192 EYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 29/229 (12%)
Query: 335 ADYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVG 394
A+ K F DD D++R LG G FG Y + + + + +
Sbjct: 4 AEMPKRKFTIDDF------DIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLE 53
Query: 395 REDFQEHIKR----LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQR 450
+E + ++R L HPN+L + +++ ++ L+ EF G L +L Q+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL------QK 107
Query: 451 PG-LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
G D Q ++ + + Y H + H +K N+L+ E + D+ +
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWS-V 162
Query: 510 INPDNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
P M Y PE +K D+W G+L E L G P
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 73 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 127
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 128 S----RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEY 527
H+ + H LK N+L++ L D+ L R P +T V Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + V +Y + E+ + I L HPN++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEAR-----------FFFQQLISGVSYCH--- 132
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLT----DYALRPLINPDNAHTLMV-AYKSPEY---- 527
+ H LK N LLD S P L Y+ +++ T+ AY +PE
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GK++ DVWS G+ + +L G YP
Sbjct: 192 EYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 MK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 161
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQ-------EHIKRLGRLEHPNLLP 415
+G G +G YK + +V + ++ N G E ++RL EHPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 416 L-----TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L T+ R+ + L++E V+ L L PGL +T +++ ++G+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD---KAPPPGLPAETIKDLMRQFLRGLD 126
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEY 527
+LH + I H LK N+L+ L D+ L + + A +V Y++PE
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 528 AHNGKISKKSDVWSLGILILELLTGK 553
+ D+WS+G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 68 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 122
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 123 S----RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 68 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 122
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H +L + N ++ F + D+ + R + D L V + +
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYV-VKRYK-QMNNVG------REDFQEHIKRLGRLEHPNL 413
+G G +G +K + NG +V +KR + Q G RE ++ L EHPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE--VAVLRHLETFEHPNV 76
Query: 414 LPL----TAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+ L T +E KL L++E V+ L L PG+ +T ++ +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDK---VPEPGVPTETIKDMMFQLLRG 132
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSP 525
+ +LH+ + H LK N+L+ S + L D+ L + + A T +V Y++P
Sbjct: 133 LDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGK 553
E + D+WS+G + E+ K
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 68 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 122
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 68 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 122
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H +L + N ++ F + D+ + R + D L V + +
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 68 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 122
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYV-VKRYK-QMNNVG------REDFQEHIKRLGRLEHPNL 413
+G G +G +K + NG +V +KR + Q G RE ++ L EHPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE--VAVLRHLETFEHPNV 76
Query: 414 LPL----TAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+ L T +E KL L++E V+ L L PG+ +T ++ +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV---PEPGVPTETIKDMMFQLLRG 132
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSP 525
+ +LH+ + H LK N+L+ S + L D+ L + + A T +V Y++P
Sbjct: 133 LDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGK 553
E + D+WS+G + E+ K
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 362 VLGSGTFGASYKTVISNGQA----YVVKRYKQMNNV-GREDFQEHIKRLGRLEHPNLLPL 416
+LG G FG Y+ V +N + VK K+ + +E F + L+HP+++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+E ++ E G L L N + L T + + K MAYL
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE--- 126
Query: 477 PGSI-IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHN 530
SI H + N+L+ L D+ L I ++ + L + + SPE +
Sbjct: 127 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 531 GKISKKSDVWSLGILILELLT-GKYPENYL 559
+ + SDVW + + E+L+ GK P +L
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 29/229 (12%)
Query: 335 ADYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVG 394
A+ K F DD FD+ LG G FG Y + + + + +
Sbjct: 5 AEMPKRKFTIDD---FDI-------GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE 54
Query: 395 REDFQEHIKR----LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQR 450
+E + ++R L HPN+L + +++ ++ L+ EF G L +L Q+
Sbjct: 55 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL------QK 108
Query: 451 PG-LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
G D Q ++ + + Y H + H +K N+L+ E + D+ +
Sbjct: 109 HGRFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWS-V 163
Query: 510 INPDNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
P M Y PE +K D+W G+L E L G P
Sbjct: 164 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 361 EVLGSGTFGASYKTVI----SNGQAYVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNL 413
++LG GTFG K ++ + G+ Y +K ++ + +++ + + L HP L
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L + ++ ++L FV + G+L + +++R + + R + +V + YLH
Sbjct: 71 TAL-KYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLH 125
Query: 474 NELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAH 529
+ + + +K N++LD+ +TD+ L D A Y +PE
Sbjct: 126 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 530 NGKISKKSDVWSLGILILELLTGKYP 555
+ + D W LG+++ E++ G+ P
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 362 VLGSGTFGASYKTVISNGQA----YVVKRYKQMNNV-GREDFQEHIKRLGRLEHPNLLPL 416
+LG G FG Y+ V +N + VK K+ + +E F + L+HP+++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+E ++ E G L L N + L T + + K MAYL
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE--- 130
Query: 477 PGSI-IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHN 530
SI H + N+L+ L D+ L I ++ + L + + SPE +
Sbjct: 131 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 531 GKISKKSDVWSLGILILELLT-GKYPENYL 559
+ + SDVW + + E+L+ GK P +L
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 362 VLGSGTFGASYKTVISNGQA----YVVKRYKQMNNV-GREDFQEHIKRLGRLEHPNLLPL 416
+LG G FG Y+ V +N + VK K+ + +E F + L+HP+++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+E ++ E G L L N + L T + + K MAYL
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE--- 142
Query: 477 PGSI-IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHN 530
SI H + N+L+ L D+ L I ++ + L + + SPE +
Sbjct: 143 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 531 GKISKKSDVWSLGILILELLT-GKYPENYL 559
+ + SDVW + + E+L+ GK P +L
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + V +Y + E+ + I L HPN++
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEAR-----------FFFQQLISGVSYCH--- 131
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLT----DYALRPLINPDNAHTLMV-AYKSPEY---- 527
+ H LK N LLD S P L Y+ +++ T+ AY +PE
Sbjct: 132 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GK++ DVWS G+ + +L G YP
Sbjct: 191 EYDGKVA---DVWSCGVTLYVMLVGAYP 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ + L HPN++ L ++ L+ E+ G + L A+
Sbjct: 44 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWM 103
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 104 KEK----EARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSN 154
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 155 EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 349 PFDLQDMLRASA--EVLGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGRE--DFQEHIK 403
P D ++L+ E +G+G F I G+ +K + N +G + + I+
Sbjct: 2 PKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDK-NTLGSDLPRIKTEIE 60
Query: 404 RLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
L L H ++ L + ++ E+ G L + Q + +TR+ + +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRV-VFR 115
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPD-NAHTLM- 519
+V +AY+H++ H LK N+L D + L D+ L +P N D + T
Sbjct: 116 QIVSAVAYVHSQ----GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCG 171
Query: 520 -VAYKSPEYAHNGK--ISKKSDVWSLGILILELLTGKYP 555
+AY +PE GK + ++DVWS+GIL+ L+ G P
Sbjct: 172 SLAYAAPELI-QGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYV-VKRYK-QMNNVG------REDFQEHIKRLGRLEHPNL 413
+G G +G +K + NG +V +KR + Q G RE ++ L EHPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE--VAVLRHLETFEHPNV 76
Query: 414 LPL----TAFYYRKEEKL-LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+ L T +E KL L++E V+ L L PG+ +T ++ +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV---PEPGVPTETIKDMMFQLLRG 132
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKSP 525
+ +LH+ + H LK N+L+ S + L D+ L + + A T +V Y++P
Sbjct: 133 LDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 526 EYAHNGKISKKSDVWSLGILILELLTGK 553
E + D+WS+G + E+ K
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 52 QLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGR 110
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 111 MK---EKEARAKF-RQIVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFSN 162
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N Y +PE K + DVWSLG+++ L++G P
Sbjct: 163 EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 29/229 (12%)
Query: 335 ADYGKLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVG 394
A+ K F DD FD+ LG G FG Y + + + + +
Sbjct: 4 AEMPKRKFTIDD---FDI-------GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE 53
Query: 395 REDFQEHIKR----LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQR 450
+E + ++R L HPN+L + +++ ++ L+ EF G L +L Q+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL------QK 107
Query: 451 PG-LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
G D Q ++ + + Y H + H +K N+L+ E + D+ +
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWS-V 162
Query: 510 INPDNAHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
P M Y PE +K D+W G+L E L G P
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H L + N ++ F + D+ + R + D L V + +
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ H L + N ++ F + D+ + R + D L V + +
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 27/212 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTAFY 420
LG G+FG ++ G VK+ V E F+ E + L P ++PL
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+ E +E GSL G+L K++ L L + ++G+ YLH+
Sbjct: 136 REGPWVNIFMELLEGGSL-GQL----VKEQGCLPEDRALYYLGQALEGLEYLHSRR---- 186
Query: 481 IPHGHLKSSNVLLDR-SFEPLLTDYALRPLINPDNAHTLMVA---------YKSPEYAHN 530
I HG +K+ NVLL L D+ + PD ++ + +PE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 531 GKISKKSDVWSLGILILELLTGKYPENYLLQG 562
K DVWS ++L +L G +P +G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTAFY 420
LG G+FG ++ G VK+ V E F+ E + L P ++PL
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK------VRLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+ E +E GSL G+L KQ L L + ++G+ YLH
Sbjct: 134 REGPWVNIFMELLEGGSL-GQL----IKQMGCLPEDRALYYLGQALEGLEYLHTRR---- 184
Query: 481 IPHGHLKSSNVLLDR-SFEPLLTDYALRPLINPDN-AHTLMVA--------YKSPEYAHN 530
I HG +K+ NVLL L D+ + PD +L+ + +PE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 531 GKISKKSDVWSLGILILELLTGKYPENYLLQG 562
K D+WS ++L +L G +P +G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 66 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 118
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDY----ALRPLINPDNAHT-- 517
V GM YL S H L + NVLL ++D+ ALR N A T
Sbjct: 119 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 518 -LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 362 VLGSGTFGASYK----TVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNL 413
VLG G +G ++ T + G+ + +K K+ V H K L ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ-TRLKIIKGVVKGMAYL 472
+ L + + L+ E++ G L +L +R G+ + T + + + +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL------EREGIFMEDTACFYLAEISMALGHL 137
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTLM--VAYKSPEYA 528
H + II + LK N++L+ LTD+ L + + HT + Y +PE
Sbjct: 138 HQK---GII-YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 529 HNGKISKKSDVWSLGILILELLTGKYP 555
++ D WSLG L+ ++LTG P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N+ + ++ L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 51 QLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVA-HGR 109
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALR- 507
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 110 XK---EKEARAKF-RQIVSAVQYCHQKF----IVHRDLKAENLLLDADXNIKIADFGFSN 161
Query: 508 --PLINPDNAHTLMVAYKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
N +A Y +PE K + DVWSLG+++ L++G P
Sbjct: 162 EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGM 469
HP+++ L Y L+++ + G L ++ ++ L + I++ +++ +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELF-----DYLTEKVALSEKETRSIMRSLLEAV 213
Query: 470 AYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV---AYKSPE 526
++LH + I H LK N+LLD + + L+D+ + P + Y +PE
Sbjct: 214 SFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 527 Y-------AHNGKISKKSDVWSLGILILELLTGKYP 555
H G K+ D+W+ G+++ LL G P
Sbjct: 270 ILKCSMDETHPG-YGKEVDLWACGVILFTLLAGSPP 304
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 60 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 112
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM---- 519
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 113 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 520 ---VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 62 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 114
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM---- 519
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 115 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 520 ---VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 66 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 118
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM---- 519
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 119 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 520 ---VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 82 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 134
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH------- 516
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 135 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 517 TLMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 82 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 134
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH------- 516
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 135 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 517 TLMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLSF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 405 LGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIK 463
+ +L++P ++ + E +L+ E E G L L N H K + ++++
Sbjct: 72 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVH 124
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM---- 519
V GM YL S H L + NVLL ++D+ L + D +
Sbjct: 125 QVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 520 ---VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + K S KSDVWS G+L+ E +
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 424 EEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
E +L+ E E G L L N H K + ++++ V GM YL S
Sbjct: 98 ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKYLEE----SNFV 147
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH-------TLMVAYKSPEYAHNGKISK 535
H L + NVLL ++D+ L + D + V + +PE + K S
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 536 KSDVWSLGILILELLT 551
KSDVWS G+L+ E +
Sbjct: 208 KSDVWSFGVLMWEAFS 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 361 EVLGSGTFGASYKTVISN-GQAYVVKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
E LG+G FG + + + G+ +K+ +Q ++ RE + I+ + +L HPN++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 419 F------YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
+ LL E+ E G L + + N + GL ++ + + YL
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDL--RKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMVA---YKSPE 526
H + I H LK N++L + L+ D ++ T V Y +PE
Sbjct: 139 HE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 194
Query: 527 YAHNGKISKKSDVWSLGILILELLTGKYP 555
K + D WS G L E +TG P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 361 EVLGSGTFGASYKTVISN-GQAYVVKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
E LG+G FG + + + G+ +K+ +Q ++ RE + I+ + +L HPN++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 419 F------YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
+ LL E+ E G L + + N + GL ++ + + YL
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDL--RKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMVA---YKSPE 526
H + I H LK N++L + L+ D ++ T V Y +PE
Sbjct: 138 HE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
Query: 527 YAHNGKISKKSDVWSLGILILELLTGKYP 555
K + D WS G L E +TG P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 363 LGSGTFGASYK-TVISNGQAYVVKRYKQMNNVGR-------EDFQEHIKRLGRLEHPNLL 414
+G G FG +K ++ + +K ++ G ++FQ + + L HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L + ++ EFV G L +L K P + W +L+++ + G+ Y+ N
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHP-IKWSVKLRLMLDIALGIEYMQN 140
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFE--PL---LTDYALRPLINPDNAHTLM-----VAYKS 524
+ P I H L+S N+ L E P+ + D+ + + H++ + +
Sbjct: 141 QNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHSVSGLLGNFQWMA 194
Query: 525 PEY--AHNGKISKKSDVWSLGILILELLTGKYP 555
PE A ++K+D +S +++ +LTG+ P
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 20/171 (11%)
Query: 395 REDFQEHIKRLGRL-EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGK-LHANHTKQRPG 452
+ D E I+ L R +HPN++ L Y + ++ E ++ G L K L +R
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA 118
Query: 453 LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVL-LDRSFEP---LLTDYALRP 508
++ + K + YLH + + H LK SN+L +D S P + D+
Sbjct: 119 S------AVLFTITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 509 LINPDNAHTLMVAYKS----PEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ +N + Y + PE D+WSLG+L+ +LTG P
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++E V L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKSPEY 527
H+ + H LK N+L++ L D+ L R P +T V Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 528 AHNGKI-SKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 119
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 120 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 25/204 (12%)
Query: 363 LGSGTFGA----SYK-TVISNGQAYVVKRYK-QMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG Y T G+ VK K R +++ I L L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 417 TAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
+ EK L+ E+V GSL L R + L + + +GMAYLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H +L + NVLLD + D+ L + + + + V + +PE
Sbjct: 136 QH----YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K SDVWS G+ + ELLT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 120
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 121 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 70
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 71 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 122
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 123 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 120
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 121 CHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 120
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 121 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 119
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 120 CHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ + L + A+ P L +IK +++G+A+
Sbjct: 69 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIKSYLFQLLQGLAF 120
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 121 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ + + + + V +E I L L HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 118
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 119 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ + + + + V +E I L L HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 117
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT---LMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P +T + + Y++PE
Sbjct: 118 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 363 LGSGTFGA----SYK-TVISNGQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
LG G FG Y T G+ VK K+ R +Q I+ L L H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 417 TAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
+ EK L+ E+V GSL L R + L + + +GMAYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H L + NVLLD + D+ L + + + + V + +PE
Sbjct: 131 QH----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K SDVWS G+ + ELLT
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVK--------RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
+G G++G + I N Q ++ + +Q+N E + ++ + +L HPN+
Sbjct: 33 AIGQGSYGV-VRVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHA---NHTKQ--------------------- 449
L Y ++ L+ E G L KL+ + T +
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 450 -------RPGLDWQTRLKIIKGVVK----GMAYLHNELPGSIIPHGHLKSSNVLL--DRS 496
R LD+ R K+I +++ + YLHN+ I H +K N L ++S
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG----ICHRDIKPENFLFSTNKS 206
Query: 497 FEPLLTDYALRP---LINPDNAHTLMVAYKSPEY-------AHNGKISKKSDVWSLGILI 546
FE L D+ L +N + + +P + N K D WS G+L+
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 547 LELLTGKYP 555
LL G P
Sbjct: 267 HLLLMGAVP 275
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 28/248 (11%)
Query: 347 MEPFDLQD--MLRASAEVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDF----- 398
M+P LQD +LR V+G G++ + + Y +K K+ ED
Sbjct: 3 MDPLGLQDFDLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 58
Query: 399 QEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTR 458
++H+ HP L+ L + + + + E+V G L H ++ P +
Sbjct: 59 EKHVFEQAS-NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLP----EEH 111
Query: 459 LKIIKGVVK-GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH 516
+ + + YLH II + LK NVLLD LTDY + + + P +
Sbjct: 112 ARFYSAEISLALNYLHER---GII-YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167
Query: 517 TLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWV 573
+ Y +PE D W+LG+L+ E++ G+ P + + + + +++
Sbjct: 168 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
Query: 574 NNMVKEKR 581
++ EK+
Sbjct: 228 FQVILEKQ 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 363 LGSGTFGA----SYK-TVISNGQAYVVKRYKQMNNVG---REDFQEHIKRLGRLEHPNLL 414
LG G FG Y T G+ VK K+ G R +Q I+ L L H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 415 PLTAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
+ EK L+ E+V GSL L R + L + + +GMAYL
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSP 525
H + H L + NVLLD + D+ L + + + + V + +P
Sbjct: 128 HAQH----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 526 EYAHNGKISKKSDVWSLGILILELLT 551
E K SDVWS G+ + ELLT
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK-G 468
HP L+ L + + + + E+V G L H ++ P + + +
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLP----EEHARFYSAEISLA 165
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKS 524
+ YLH I + LK NVLLD LTDY + + + P + + Y +
Sbjct: 166 LNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKR 581
PE D W+LG+L+ E++ G+ P + + + + +++ ++ EK+
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 278
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ + L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + DY L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 133
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D ++ Y +PE S
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPP 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK-G 468
HP L+ L + + + + E+V G L H ++ P + + +
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLP----EEHARFYSAEISLA 133
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKS 524
+ YLH I + LK NVLLD LTDY + + + P + + Y +
Sbjct: 134 LNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKR 581
PE D W+LG+L+ E++ G+ P + + + + +++ ++ EK+
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 246
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 157
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D ++ Y +PE S
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPP 238
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ L + A+ P L +IK +++G+A+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 119
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 120 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 159
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D ++ Y +PE S
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPP 240
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ I G+A K +N R +F + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLH-----ANHTKQRPGLDWQTRLKIIKGVVKGMA 470
L + + L++ E + +G L L A + RP Q +++ + GMA
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------LMVAYKS 524
YL+ H L + N ++ F + D+ + I + L V + +
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SD+WS G+++ E+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ + L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 88/229 (38%), Gaps = 46/229 (20%)
Query: 360 AEVLGSGTFGASYKTVISNGQAY-----------VVKRYKQ-MNNVGREDFQEHIKRLGR 407
+VLGSG FG + N AY VK K+ ++ RE +K + +
Sbjct: 50 GKVLGSGAFGK-----VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 408 L-EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG-------------- 452
L H N++ L L++E+ G L L + K
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 453 ----LDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
L ++ L V KGM +L E + H L + NVL+ + D+ L
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFL--EFKSCV--HRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 509 LINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
I D+ + L V + +PE G + KSDVWS GIL+ E+ +
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTAFY 420
+G G+FG ++ G VK+ + E F+ E + L P ++PL
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+ E +E GSL G+L KQ L L + ++G+ YLH
Sbjct: 120 REGPWVNIFMELLEGGSL-GQL----IKQMGCLPEDRALYYLGQALEGLEYLHTRR---- 170
Query: 481 IPHGHLKSSNVLLDR-SFEPLLTDYALRPLINPDN-AHTLMVA--------YKSPEYAHN 530
I HG +K+ NVLL L D+ + PD +L+ + +PE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 531 GKISKKSDVWSLGILILELLTGKYPENYLLQG 562
K D+WS ++L +L G +P +G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++EF+ + L + A+ P L +IK +++G+A+
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 119
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 120 CHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 21/221 (9%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGA-SYKTVISNGQAYVVKRYKQMNNVGREDFQEHI 402
R +M+ F ++ M G GTFG S G + +K+ Q + Q +
Sbjct: 19 RKEMDRFQVERMA-------GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-M 70
Query: 403 KRLGRLEHPNLLPLTAFYYR--KEEKLLLYEFVENGSLAGKLH--ANHTKQRPGLDWQTR 458
+ L L HPN++ L +++Y + ++ +Y V + LH + +R
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 459 LKI-IKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAH 516
+K+ + +++ + LH LP + H +K NVL++ + L L D+ ++P +
Sbjct: 131 IKVFLFQLIRSIGCLH--LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN 188
Query: 517 TLMVA---YKSPEYAH-NGKISKKSDVWSLGILILELLTGK 553
+ Y++PE N + D+WS+G + E++ G+
Sbjct: 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 424 EEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
E +L+ E E G L L N H K + ++++ V GM YL S
Sbjct: 442 ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKYLEE----SNFV 491
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH-------TLMVAYKSPEYAHNGKISK 535
H L + NVLL ++D+ L + D + V + +PE + K S
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 551
Query: 536 KSDVWSLGILILELLT 551
KSDVWS G+L+ E +
Sbjct: 552 KSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 424 EEKLLLYEFVENGSLAGKLHAN-HTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIP 482
E +L+ E E G L L N H K + ++++ V GM YL S
Sbjct: 443 ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKYLEE----SNFV 492
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH-------TLMVAYKSPEYAHNGKISK 535
H L + NVLL ++D+ L + D + V + +PE + K S
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 552
Query: 536 KSDVWSLGILILELLT 551
KSDVWS G+L+ E +
Sbjct: 553 KSDVWSFGVLMWEAFS 568
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLLPLTAFY 420
+G G+FG ++ G VK+ V E F+ E + L P ++PL
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK------VRLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
+ E +E GSL G+L KQ L L + ++G+ YLH
Sbjct: 136 REGPWVNIFMELLEGGSL-GQL----IKQMGCLPEDRALYYLGQALEGLEYLHTRR---- 186
Query: 481 IPHGHLKSSNVLLDR-SFEPLLTDYALRPLINPDN-AHTLMVA--------YKSPEYAHN 530
I HG +K+ NVLL L D+ + PD +L+ + +PE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 531 GKISKKSDVWSLGILILELLTGKYPENYLLQG 562
K D+WS ++L +L G +P +G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGM 469
HPN++ L Y L+++ ++ G L ++ ++ L + KI++ +++ +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIMRALLEVI 124
Query: 470 AYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV---AYKSPE 526
LH I H LK N+LLD LTD+ ++P + +Y +PE
Sbjct: 125 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 527 YA-------HNGKISKKSDVWSLGILILELLTGKYP 555
H G K+ D+WS G+++ LL G P
Sbjct: 181 IIECSMNDNHPG-YGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK-G 468
HP L+ L + + + + E+V G L H ++ P + + +
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLP----EEHARFYSAEISLA 118
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLMVA---YKS 524
+ YLH I + LK NVLLD LTDY + + + P + + Y +
Sbjct: 119 LNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKR 581
PE D W+LG+L+ E++ G+ P + + + + +++ ++ EK+
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 45/227 (19%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVKRYK----QMNNVGREDF------QEHIKRL--GRL 408
VLG G FG K + + + Y +K+ + +++ + E +++ R L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 409 EHPNLL-PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
E N + P+TA +K + E+ ENG+L +H+ + Q+ W ++ + +++
Sbjct: 73 ERRNFVKPMTAVK-KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN-------------PDN 514
++Y+H++ I H LK N+ +D S + D+ L ++ P +
Sbjct: 128 ALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 515 AHTLMVAYKSPEYAH------NGKISKKSDVWSLGILILELLTGKYP 555
+ L A + Y G ++K D++SLGI+ E++ YP
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 361 EVLGSGTFGASYKTVIS----NGQAYVVKRYKQMNNVGRED-FQEHIKRLGRLEHPNLLP 415
E LG+G F + V++ G+ + VK + G+E + I L +++H N++
Sbjct: 28 ETLGTGAFS---EVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYLH 473
L Y L+ + V G L ++ +T++ +I+ V+ + YLH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST-------LIRQVLDAVYYLH 137
Query: 474 NELPGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA---YKSPEY 527
I H LK N+L D + +++D+ L + + + Y +PE
Sbjct: 138 R----MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEV 193
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYPENY 558
SK D WS+G++ LL G YP Y
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 223
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 363 LGSGTFGA----SYK-TVISNGQAYVVKRYK-QMNNVGREDFQEHIKRLGRLEHPNLLPL 416
LG G FG Y T G+ VK K R +++ I L L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 417 TAFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
+ EK L+ E+V GSL L R + L + + +GMAYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 475 ELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEY 527
+ H +L + NVLLD + D+ L + + + + V + +PE
Sbjct: 136 QH----YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 528 AHNGKISKKSDVWSLGILILELLT 551
K SDVWS G+ + ELLT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 139
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D + Y +PE S
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPP 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 363 LGSGTFGASYK---TVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAF 419
+G G+F YK T + A+ + +++ R+ F+E + L L+HPN++ F
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV---RF 90
Query: 420 YYRKEEK-------LLLYEFVENGSLAGKLHANHTKQRPGL-DWQTRLKIIKGVVKGMAY 471
Y E +L+ E +G+L L + L W + ++KG+ +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQF 144
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTLMVA--YKSPEYA 528
LH P I H LK N+ + + + D L L A ++ + +PE
Sbjct: 145 LHTRTPP--IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE-X 201
Query: 529 HNGKISKKSDVWSLGILILELLTGKYP 555
+ K + DV++ G LE T +YP
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG + V +Y + + + I L HPN++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEAR-----------FFFQQLISGVSYCH--- 132
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLT----DYALRPLINPDNAHTLMV-AYKSPEY---- 527
+ H LK N LLD S P L Y+ +++ T+ AY +PE
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GK++ DVWS G+ + +L G YP
Sbjct: 192 EYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 135
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D + Y +PE S
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)
Query: 363 LGSGTFGASYKTVISNGQAY----VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G F ++ ++ + +V + + RE I L H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
F+ + ++ E SL +LH K+R L ++ +V G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLL-ELH----KRRKALTEPEARYYLRQIVLGCQYLHR---- 135
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKIS 534
+ + H LK N+ L+ E + D+ L + D + Y +PE S
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 535 KKSDVWSLGILILELLTGKYP 555
+ DVWS+G ++ LL GK P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 52 QLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGR 110
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 111 MK---EKEARSKF-RQIVSAVQYCHQKR----IVHRDLKAENLLLDADMNIKIADFGFSN 162
Query: 509 LINPD---NAHTLMVAYKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
+A Y +PE K + DVWSLG+++ L++G P
Sbjct: 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 50/234 (21%)
Query: 352 LQDMLRASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVG------REDFQEHIKRL 405
++D+ +G GT+G YK +G+ KQ+ G RE I L
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-----IALL 72
Query: 406 GRLEHPNLLPLTAFYYRKEEK--LLLYEFVENGSLAG-KLH-ANHTKQRPGLDWQTRLKI 461
L+HPN++ L + ++ LL+++ E+ K H A+ ++P +++
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP-------VQL 125
Query: 462 IKGVVK--------GMAYLHNELPGSIIPHGHLKSSNVLL-------------DRSFEPL 500
+G+VK G+ YLH + + H LK +N+L+ D F L
Sbjct: 126 PRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 501 LTDYALRPLINPDNAHTLMVAYKSPEYAHNGK-ISKKSDVWSLGILILELLTGK 553
L+PL + D + Y++PE + +K D+W++G + ELLT +
Sbjct: 182 FNS-PLKPLADLDPV-VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 23/205 (11%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQ------AYVVKRYKQMNNVGREDFQEHIKRLGRLEHPN 412
+VLGSG FG YK + I +G+ A V R +E E G + P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPY 80
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
+ L +L+ + + G L + N + L Q L + KGM+YL
Sbjct: 81 VSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGR----LGSQDLLNWCMQIAKGMSYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L++ D K P E
Sbjct: 136 ED----VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED---FQEHIKRLGRLEHPNLLPLTA 418
+G G++G K + G + + K++ ED F++ I+ + L+HPN++ L
Sbjct: 16 TIGRGSWG-EVKIAVQKG-TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 419 FYYRKEEKLLLYEFVENGSLAGK-LHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ + L+ E G L + +H ++ +I+K V+ +AY H
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------ARIMKDVLSAVAYCHK--- 124
Query: 478 GSIIPHGHLKSSNVLL--DRSFEPL-LTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ H LK N L D PL L D+ L P V Y SP+ G
Sbjct: 125 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ-VLEG 182
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
+ D WS G+++ LL G YP
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG-YP 205
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 360 AEVLGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLP 415
E +G GT+G YK G+ +K+ + + V +E I L L HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG----VVKGMAY 471
L + + + L++E V+ L + A+ P L +IK +++G+A+
Sbjct: 70 LLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIP-------LPLIKSYLFQLLQGLAF 121
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAH---TLMVAYKSPEY 527
H+ + H LK N+L++ L D+ L R P + + + Y++PE
Sbjct: 122 CHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 528 AHNGK-ISKKSDVWSLGILILELLTGK 553
K S D+WSLG + E++T +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 362 VLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGRED---FQEHIKRLGRLEHPNLLPLTA 418
+G G++G K + G + + K++ ED F++ I+ + L+HPN++ L
Sbjct: 33 TIGRGSWG-EVKIAVQKG-TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 419 FYYRKEEKLLLYEFVENGSLAGK-LHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ + L+ E G L + +H ++ +I+K V+ +AY H
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------ARIMKDVLSAVAYCHK--- 141
Query: 478 GSIIPHGHLKSSNVLL--DRSFEPL-LTDYALRPLINPDNAHTLMVA---YKSPEYAHNG 531
+ H LK N L D PL L D+ L P V Y SP+ G
Sbjct: 142 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ-VLEG 199
Query: 532 KISKKSDVWSLGILILELLTGKYP 555
+ D WS G+++ LL G YP
Sbjct: 200 LYGPECDEWSAGVMMYVLLCG-YP 222
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 356 LRASAE------VLGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGRED---FQEHIKRL 405
LR AE V+G G FG S + Y +K + + R D F E +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 406 GRLEHPNLLPLTAFYYRKEEKLL--LYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
P ++ L FY ++++ L + E++ G L + ++ + + +
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYK 523
+ M ++H ++ K N+LLD+S L D+ +N + A
Sbjct: 187 DAIHSMGFIHRDV----------KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 524 SPEY---------AHNGKISKKSDVWSLGILILELLTGKYP 555
+P+Y +G ++ D WS+G+ + E+L G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 356 LRASAE------VLGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGRED---FQEHIKRL 405
LR AE V+G G FG S + Y +K + + R D F E +
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 123
Query: 406 GRLEHPNLLPLTAFYYRKEEKLL--LYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
P ++ L FY ++++ L + E++ G L + ++ + + +
Sbjct: 124 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYK 523
+ M ++H ++ K N+LLD+S L D+ +N + A
Sbjct: 182 DAIHSMGFIHRDV----------KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 524 SPEY---------AHNGKISKKSDVWSLGILILELLTGKYP 555
+P+Y +G ++ D WS+G+ + E+L G P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 356 LRASAE------VLGSGTFG-ASYKTVISNGQAYVVKRYKQMNNVGRED---FQEHIKRL 405
LR AE V+G G FG S + Y +K + + R D F E +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 406 GRLEHPNLLPLTAFYYRKEEKLL--LYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIK 463
P ++ L FY ++++ L + E++ G L + ++ + + +
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 464 GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYK 523
+ M ++H ++ K N+LLD+S L D+ +N + A
Sbjct: 187 DAIHSMGFIHRDV----------KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 524 SPEY---------AHNGKISKKSDVWSLGILILELLTGKYP 555
+P+Y +G ++ D WS+G+ + E+L G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGM 469
HPN++ L Y L+++ ++ G L ++ ++ L + KI++ +++ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIMRALLEVI 137
Query: 470 AYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV---AYKSPE 526
LH I H LK N+LLD LTD+ ++P + +Y +PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 527 YA-------HNGKISKKSDVWSLGILILELLTGKYP 555
H G K+ D+WS G+++ LL G P
Sbjct: 194 IIECSMNDNHPG-YGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 410 HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGM 469
HPN++ L Y L+++ ++ G L ++ ++ L + KI++ +++ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIMRALLEVI 137
Query: 470 AYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV---AYKSPE 526
LH I H LK N+LLD LTD+ ++P + +Y +PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 527 YA-------HNGKISKKSDVWSLGILILELLTGKYP 555
H G K+ D+WS G+++ LL G P
Sbjct: 194 IIECSMNDNHPG-YGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 362 VLGSGTFGASYK----TVISNGQAYVVKRYKQMNNVGREDFQEHIKR----LGRLEHPNL 413
VLG G +G ++ T + G+ + +K K+ V H K L ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQ-TRLKIIKGVVKGMAYL 472
+ L + + L+ E++ G L +L +R G+ + T + + + +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL------EREGIFMEDTACFYLAEISMALGHL 137
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL--RPLINPDNAHTLM--VAYKSPEYA 528
H + II + LK N++L+ LTD+ L + + H + Y +PE
Sbjct: 138 HQK---GII-YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 529 HNGKISKKSDVWSLGILILELLTGKYP 555
++ D WSLG L+ ++LTG P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 35/261 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGR-----------EDFQEHIKRLGRLEHP 411
+ SG++GA V S G +KR + GR + I+ L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 412 NLLPLTAFYYRKEE----KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
N+L L + EE KL L + LA +H QR + Q + ++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH----DQRIVISPQHIQYFMYHILL 145
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKS 524
G+ LH + + H L N+LL + + + D+ L D T V Y++
Sbjct: 146 GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 525 PEYAHNGK-ISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRTG 583
PE K +K D+WS G ++ E+ K L +G ++ N +N +V+ T
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRK----ALFRG----STFYNQLNKIVEVVGTP 253
Query: 584 DVFDKEMKGAKYSKSEMINLL 604
+ D M + ++ + N L
Sbjct: 254 KIEDVVMFSSPSARDYLRNSL 274
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H
Sbjct: 59 FRREAQNAAALNHPAIV---AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--- 112
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
+ + +++I + + + H II H +K +N+++ + + D+ + R +
Sbjct: 113 --MTPKRAIEVIADACQALNFSHQN---GII-HRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ T A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 35/261 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGR-----------EDFQEHIKRLGRLEHP 411
+ SG++GA V S G +KR + GR + I+ L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 412 NLLPLTAFYYRKEE----KLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
N+L L + EE KL L + LA +H QR + Q + ++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH----DQRIVISPQHIQYFMYHILL 145
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKS 524
G+ LH + + H L N+LL + + + D+ L D T V Y++
Sbjct: 146 GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 525 PEYAHNGK-ISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWVNNMVKEKRTG 583
PE K +K D+WS G ++ E+ K L +G ++ N +N +V+ T
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRK----ALFRG----STFYNQLNKIVEVVGTP 253
Query: 584 DVFDKEMKGAKYSKSEMINLL 604
+ D M + ++ + N L
Sbjct: 254 KIEDVVMFSSPSARDYLRNSL 274
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 339 KLSFVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTVISNGQAYV---VKRYKQ-MNNVG 394
KL RD++ D++ LG G FG+ + V + + +K KQ
Sbjct: 3 KLFLKRDNLLIADIE---------LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD 53
Query: 395 REDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD 454
E+ + + +L++P ++ L + E L+L + G G LH +R +
Sbjct: 54 TEEMMREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGG---GPLHKFLVGKREEIP 108
Query: 455 WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDN 514
+++ V GM YL + H L + NVLL ++D+ L + D+
Sbjct: 109 VSNVAELLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
Query: 515 AHTLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
++ + + +PE + K S +SDVWS G+ + E L+
Sbjct: 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 138 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G +G ++ G+ VK + + + F+E + L H N+L A
Sbjct: 43 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 99
Query: 420 ----YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ + E GSL L Q LD + L+I+ + G+A+LH E
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---------Y 522
+ G+ I H LKS N+L+ ++ + + D L +++ + + L V Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 523 KSPEYAHNG------KISKKSDVWSLGILILEL 549
+PE K+ D+W+ G+++ E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 389 QMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTK 448
Q+N + ++ + L HPN++ L ++ L+ E+ G + L A H +
Sbjct: 49 QLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGR 107
Query: 449 QRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRP 508
+ + + R K + +V + Y H + I H LK+ N+LLD + D+
Sbjct: 108 MK---EKEARSKF-RQIVSAVQYCHQKR----IVHRDLKAENLLLDADMNIKIADFGFSN 159
Query: 509 LINPDNAHTLMVA---YKSPEYAHNGKISK-KSDVWSLGILILELLTGKYP 555
Y +PE K + DVWSLG+++ L++G P
Sbjct: 160 EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 132 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 33/208 (15%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+G+G FG + V +Y + E+ + I L HPN++
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 423 KEEKLLLYEFVENGSL------AGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
++ E+ G L AG+ + + + ++ G++Y H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEAR-----------FFFQQLISGVSYAH--- 132
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLL--TDYALRP---LINPDNAHTLMVAYKSPEY---- 527
+ H LK N LLD S P L D+ L + + AY +PE
Sbjct: 133 -AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYP 555
++GK++ DVWS G+ + +L G YP
Sbjct: 192 EYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 342 FVRDDMEPFDLQDMLRASAEVLGSGTFGASYKTV-ISNGQAYVVKRYKQMNNVGREDFQE 400
FV +E +L+ +R VL G F Y+ + +G+ Y +KR +
Sbjct: 18 FVGQTVELGELRLRVR---RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 401 HIKRLGRLE-HPNLLPL-TAFYYRKEEK-------LLLYEFVENGSLAGKLHANHTKQRP 451
+ + +L HPN++ +A KEE LLL E + G L L + R
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFL--KKMESRG 131
Query: 452 GLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA------ 505
L T LKI + + ++H + P I H LK N+LL L D+
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPII--HRDLKVENLLLSNQGTIKLCDFGSATTIS 189
Query: 506 ----------LRPLINPDNAHTLMVAYKSPEYAH---NGKISKKSDVWSLGILILELLTG 552
R L+ + Y++PE N I +K D+W+LG ++ L
Sbjct: 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249
Query: 553 KYP 555
++P
Sbjct: 250 QHP 252
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 137 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 190
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 135 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 188
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 142 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 195
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 129 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 182
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 142 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 195
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 132 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 135 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV 188
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 142 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 195
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L++L+ + +N + LPD R +G L ++L N S ++ + AF G+ SL +L +
Sbjct: 127 LAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLH 184
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSL 197
NR+ P + L +LM L L AN +P +R+L
Sbjct: 185 QNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRAL 226
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 117 LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELR 176
R + L+ +YL DN + DD F + +L L++ NR++ + L L L
Sbjct: 124 FRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 182
Query: 177 LEANKFQGQVPEIKQNEMRSLG 198
L N+ V + + R LG
Sbjct: 183 LHQNR----VAHVHPHAFRDLG 200
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 79 KLEQMNLSGTIAAESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNIS 138
+++ +G E L L + + S F G +G L +++L G +
Sbjct: 69 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG-------LGRLHTLHLDRCGLQ-ELG 120
Query: 139 DDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSL 197
F G+ +L+ LY+ +N L + L L L L N+ VPE + SL
Sbjct: 121 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSL 178
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 141 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 194
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 136 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 141 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV 194
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 135 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV 188
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 140 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 193
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 35/227 (15%)
Query: 352 LQDMLRASAEVLGSGTFGASYKTVIS--NGQAYVVKRY-KQMNNVGREDFQEHIKRLGRL 408
+D+ + +VLG G A +T I+ Q Y VK KQ ++ F+E ++ L +
Sbjct: 10 FEDVYQLQEDVLGEGAH-ARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE-VEMLYQC 67
Query: 409 E-HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
+ H N+L L F+ ++ L++E + GS+ +H K+R + + + +++ V
Sbjct: 68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASV-VVQDVAS 122
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDR--SFEPL-LTDYAL----------RPLINPDN 514
+ +LHN+ I H LK N+L + P+ + D+ L P+ P+
Sbjct: 123 ALDFLHNKG----IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 515 AHTLMVA-YKSPE----YAHNGKI-SKKSDVWSLGILILELLTGKYP 555
A Y +PE ++ I K+ D+WSLG+++ LL+G YP
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-YP 224
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L++L+ + +N + LPD R +G L ++L N S ++ + AF G+ SL +L +
Sbjct: 128 LAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLH 185
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSL 197
NR+ P + L +LM L L AN +P +R+L
Sbjct: 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRAL 227
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 117 LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELR 176
R + L+ +YL DN + DD F + +L L++ NR++ + L L L
Sbjct: 125 FRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183
Query: 177 LEANKFQGQVPEIKQNEMRSLG 198
L N+ V + + R LG
Sbjct: 184 LHQNR----VAHVHPHAFRDLG 201
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 79 KLEQMNLSGTIAAESLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNIS 138
+++ +G E L L + + S F G +G L +++L G +
Sbjct: 70 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG-------LGRLHTLHLDRCGLQ-ELG 121
Query: 139 DDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMRSL 197
F G+ +L+ LY+ +N L + L L L L N+ VPE + SL
Sbjct: 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSL 179
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 132 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H
Sbjct: 59 FRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--- 112
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
+ + +++I + + + H II H +K +N+++ + + D+ + R +
Sbjct: 113 --MTPKRAIEVIADACQALNFSHQN---GII-HRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ T A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 153 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 206
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 150 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 203
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H
Sbjct: 59 FRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--- 112
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
+ + +++I + + + H II H +K +N+++ + + D+ + R +
Sbjct: 113 --MTPKRAIEVIADACQALNFSHQN---GII-HRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ T A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G +G ++ G+ VK + + + F+E + L H N+L A
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 70
Query: 420 ----YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ + E GSL L Q LD + L+I+ + G+A+LH E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---------Y 522
+ G+ I H LKS N+L+ ++ + + D L +++ + + L V Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 523 KSPEYAHNG------KISKKSDVWSLGILILEL 549
+PE K+ D+W+ G+++ E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 149 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 202
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 127 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 180
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 127 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 180
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 150 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 203
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H
Sbjct: 59 FRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--- 112
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
+ + +++I + + + H II H +K +N+++ + + D+ + R +
Sbjct: 113 --MTPKRAIEVIADACQALNFSHQN---GII-HRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ T A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 135 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 188
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 126 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 149 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 202
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G +G ++ G+ VK + + + F+E + L H N+L A
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIAS 70
Query: 420 ----YYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ + E GSL L Q LD + L+I+ + G+A+LH E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---------Y 522
+ G+ I H LKS N+L+ ++ + + D L +++ + + L V Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 523 KSPEYAHNG------KISKKSDVWSLGILILEL 549
+PE K+ D+W+ G+++ E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 128 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 181
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 126 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 126 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLM 519
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L R + +
Sbjct: 137 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 520 VAYKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 132 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV 185
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLM 519
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L R + +
Sbjct: 137 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 520 VAYKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 136 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 363 LGSGTFGASYKTVISNGQAYV---VKRYKQ-MNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG G FG+ + V + + +K KQ E+ + + +L++P ++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+ E L+L + G G LH +R + +++ V GM YL +
Sbjct: 404 VC--QAEALMLVMEMAGG---GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK--- 455
Query: 479 SIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VAYKSPEYAHNG 531
H +L + NVLL ++D+ L + D+++ + + +PE +
Sbjct: 456 -NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 532 KISKKSDVWSLGILILELLT 551
K S +SDVWS G+ + E L+
Sbjct: 515 KFSSRSDVWSYGVTMWEALS 534
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 136 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 136 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLM 519
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L R + +
Sbjct: 137 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 520 VAYKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDSELKILDFGL--CRHTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H +
Sbjct: 76 FRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEG 128
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
P + + +++I + + + H + I H +K +N+++ + + D+ + R +
Sbjct: 129 P-MTPKRAIEVIADACQALNFSHQ----NGIIHRDVKPANIMISATNAVKVMDFGIARAI 183
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ T A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 184 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 123 LKSIYLSDN----GFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLE 178
L+ ++L +N + + D FEG++ L+ LY+ +N L P L L L L
Sbjct: 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512
Query: 179 ANKFQGQVPEIKQNEMRSLGLANNELEGPIPESLSKMDPSTFAGNKNLCGPPLDPCVLPK 238
+N+ + L ++ N+L P P+ + NK +C C L
Sbjct: 513 SNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC-----ECELST 567
Query: 239 HPEIPNNVSQPPKGQPPIIVQENPNQKKEVSLLKIIM-------IVLVLGVSLGIIAAIL 291
N+ + G P I P+ VSL + ++ L SL I+ +
Sbjct: 568 FINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLFIVCTVT 627
Query: 292 IIFYL 296
+ +L
Sbjct: 628 LTLFL 632
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 137 ISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANK---FQGQVPEIKQNE 193
I+D+AF G+ +L+ L ++ N L S+ LPK+ + L+ N Q Q + + +
Sbjct: 305 IADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLE-K 363
Query: 194 MRSLGLANNEL 204
+++L L +N L
Sbjct: 364 LQTLDLRDNAL 374
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 35/227 (15%)
Query: 352 LQDMLRASAEVLGSGTFGASYKTVIS--NGQAYVVKRY-KQMNNVGREDFQEHIKRLGRL 408
+D+ + +VLG G A +T I+ Q Y VK KQ ++ F+E ++ L +
Sbjct: 10 FEDVYQLQEDVLGEGAH-ARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE-VEMLYQC 67
Query: 409 E-HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
+ H N+L L F+ ++ L++E + GS+ +H K+R + + + +++ V
Sbjct: 68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASV-VVQDVAS 122
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDR--SFEPL-LTDYAL----------RPLINPDN 514
+ +LHN+ I H LK N+L + P+ + D+ L P+ P+
Sbjct: 123 ALDFLHNKG----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 515 AHTLMVA-YKSPE----YAHNGKI-SKKSDVWSLGILILELLTGKYP 555
A Y +PE ++ I K+ D+WSLG+++ LL+G YP
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-YP 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 15 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 420 YYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 125
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 183
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 420 YYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 158
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 216
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 31/214 (14%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLE-------HPNL 413
+V+G G FG K I + K+M +D +H G LE HPN+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKLGHHPNI 85
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLH-------------ANHTKQRPGLDWQTRLK 460
+ L + L E+ +G+L L AN T L Q L
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 143
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL---RPLINPDNAHT 517
V +GM YL + H +L + N+L+ ++ + D+ L + +
Sbjct: 144 FAADVARGMDYLSQKQ----FIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 518 LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L V + + E + + SDVWS G+L+ E+++
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 12 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 420 YYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 122
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 180
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 233
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 420 YYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 119
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 177
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 10 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 420 YYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 120
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 178
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 231
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPLTAF 419
E +G G FG ++ G+ VK + R F+E I + L H N+L A
Sbjct: 35 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 420 YYRK----EEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
+ + L+ ++ E+GSL L+ +T G+ +K+ G+A+LH E
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHME 145
Query: 476 LPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA-HTLMVA--------- 521
+ G+ I H LKS N+L+ ++ + D L + D+A T+ +A
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTKR 203
Query: 522 YKSPEYAHNG------KISKKSDVWSLGILILELL----TGKYPENYLLQGYD 564
Y +PE + + K++D++++G++ E+ G E+Y L YD
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 256
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 140 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 144 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
A+ Y ++ L L + NG K H H Q G + + G+ LH E
Sbjct: 250 AYAYETKDALCLVLTLMNGGDL-KFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRER- 306
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL-----MVAYKSPEYAHNGK 532
I + LK N+LLD ++D L ++ T+ V Y +PE N +
Sbjct: 307 ---IVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
+ D W+LG L+ E++ G+ P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
A+ Y ++ L L + NG K H H Q G + + G+ LH E
Sbjct: 250 AYAYETKDALCLVLTLMNGGDL-KFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRER- 306
Query: 478 GSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL-----MVAYKSPEYAHNGK 532
I + LK N+LLD ++D L ++ T+ V Y +PE N +
Sbjct: 307 ---IVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
+ D W+LG L+ E++ G+ P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 31/214 (14%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLE-------HPNL 413
+V+G G FG K I + K+M +D +H G LE HPN+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKLGHHPNI 88
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLH-------------ANHTKQRPGLDWQTRLK 460
+ L + L E+ +G+L L AN T L Q L
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 146
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL---RPLINPDNAHT 517
V +GM YL + H L + N+L+ ++ + D+ L + +
Sbjct: 147 FAADVARGMDYLSQKQ----FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 518 LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L V + + E + + SDVWS G+L+ E+++
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 31/214 (14%)
Query: 361 EVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLE-------HPNL 413
+V+G G FG K I + K+M +D +H G LE HPN+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKLGHHPNI 78
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLH-------------ANHTKQRPGLDWQTRLK 460
+ L + L E+ +G+L L AN T L Q L
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 136
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL---RPLINPDNAHT 517
V +GM YL + H L + N+L+ ++ + D+ L + +
Sbjct: 137 FAADVARGMDYLSQKQ----FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 518 LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L V + + E + + SDVWS G+L+ E+++
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 14/170 (8%)
Query: 394 GREDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGL 453
G + ++ I+ L RL H N++ L Y EEK +Y +E + + ++
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLY-NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFP 107
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRS----FEPLLTDYALRPL 509
Q + ++ G+ YLH++ I H +K N+LL L AL P
Sbjct: 108 VCQAHGYFCQ-LIDGLEYLHSQG----IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 510 INPDNAHTLM--VAYKSPEYAHNGKISK--KSDVWSLGILILELLTGKYP 555
D T A++ PE A+ K D+WS G+ + + TG YP
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 360 AEVLGSGTFGA----SYKTVISNGQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPNL 413
++LG G FG+ + K VK K N+ RE +F + HPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 414 LPLTAFYYRKEEK-----LLLYEFVENGSLAGKLHANHTKQRPG-LDWQTRLKIIKGVVK 467
+ L + +++ F++ G L L + + P + QT LK + +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAH------TLMVA 521
GM YL N H L + N +L + D+ L I + + + V
Sbjct: 159 GMEYLSNR----NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT---GKYP-------ENYLLQGYDSK 566
+ + E + + KSDVW+ G+ + E+ T YP +YLL G+ K
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK 269
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 398 FQEHIKRLGRLEHPNLLPLTAFYYRKEEKL-------LLYEFVENGSLAGKLHANHTKQR 450
F+ + L HP ++ A Y E + ++ E+V+ +L +H
Sbjct: 59 FRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--- 112
Query: 451 PGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPL 509
+ + +++I + + + H II H +K +N+L+ + + D+ + R +
Sbjct: 113 --MTPKRAIEVIADACQALNFSHQN---GII-HRDVKPANILISATNAVKVVDFGIARAI 166
Query: 510 INPDNAHTLMVA------YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ N+ A Y SPE A + +SDV+SLG ++ E+LTG+ P
Sbjct: 167 ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 11/183 (6%)
Query: 379 GQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPNLLPLTAFYYR--KEEKLLLYEFVE 434
G VVK K + R+ DF E RL HPN+LP+ L+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 435 NGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLD 494
GSL LH +D +K +G A+LH P +IP L S +V +D
Sbjct: 93 YGSLYNVLHEGTNFV---VDQSQAVKFALDXARGXAFLHTLEP--LIPRHALNSRSVXID 147
Query: 495 RSFEPLLTDYALR-PLINPDNAHT-LMVAYKSPEYAHNGKISKKSDVWSLGILILELLTG 552
++ ++ +P + VA ++ + + +D WS +L+ EL+T
Sbjct: 148 EDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTR 207
Query: 553 KYP 555
+ P
Sbjct: 208 EVP 210
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 26/209 (12%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA-------NHTKQRPGLDWQTRLKIIKGVVKG 468
L + + L++ E + G L L + N P L +++ + G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--SKMIQMAGEIADG 150
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAY 522
MAYL+ + H L + N ++ F + D+ + R + D L V +
Sbjct: 151 MAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLT 551
SPE +G + SDVWS G+++ E+ T
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 363 LGSGTFGASYKTVISNGQAYVV--KRYK--QMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
+GSG +GA V A V K Y+ Q + ++E ++ L + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE-LRLLKHMRHENVIGLLD 91
Query: 419 FYYRKE------EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK-IIKGVVKGMAY 471
+ E + L+ F+ G+ GKL + ++ G D R++ ++ ++KG+ Y
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKH---EKLGED---RIQFLVYQMLKGLRY 143
Query: 472 LHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA-YKSPEYAHN 530
+H + I H LK N+ ++ E + D+ L + + ++ Y++PE N
Sbjct: 144 IH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILN 199
Query: 531 G-KISKKSDVWSLGILILELLTGK 553
+ ++ D+WS+G ++ E++TGK
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 30/209 (14%)
Query: 367 TFGASYKTVISNGQAYVVKR--YKQMN--------NVGREDFQEHIKRLGRL-EHPNLLP 415
T G K I G V KR +K N + + D E I+ L R +HPN++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGK-LHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHN 474
L Y + ++ E + G L K L +R ++ + K + YLH
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS------AVLFTITKTVEYLHA 134
Query: 475 ELPGSIIPHGHLKSSNVL-LDRSFEP---LLTDYALRPLINPDNAHTLMVAYKS----PE 526
+ + H LK SN+L +D S P + D+ + +N Y + PE
Sbjct: 135 QG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE 190
Query: 527 YAHNGKISKKSDVWSLGILILELLTGKYP 555
D+WSLG+L+ LTG P
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ T V
Sbjct: 159 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV 212
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N + D+WS+G ++ ELLTG+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHTLM 519
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L R + +
Sbjct: 153 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVAT 208
Query: 520 VAYKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 26/209 (12%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA-------NHTKQRPGLDWQTRLKIIKGVVKG 468
L + + L++ E + G L L + N P L +++ + G
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--SKMIQMAGEIADG 140
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAY 522
MAYL+ + H L + N ++ F + D+ + R + D L V +
Sbjct: 141 MAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLT 551
SPE +G + SDVWS G+++ E+ T
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ V
Sbjct: 126 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV 179
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 33/173 (19%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V +GM +L + H L + N+LL + + D+ L I NPD L
Sbjct: 208 VARGMEFLSSR----KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT---GKYPENYLLQGYDSKASLSNWVNN 575
+ + +PE + S KSDVWS G+L+ E+ + YP + + + S+
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL-------- 315
Query: 576 MVKEKRTGDVFDKEMKGAKYSKSEMINLLKIGLSCCEEDVLARMELKEVIEKI 628
R G M+ +YS E+ ++ L C D R E++EK+
Sbjct: 316 -----REG----MRMRAPEYSTPEIYQIM---LDCWHRDPKERPRFAELVEKL 356
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 28/173 (16%)
Query: 387 YKQMNNVGREDFQEHI-KRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHAN 445
+KQ ++ R + EHI K G E L L+ E+V GSL L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ----------LVMEYVPLGSLRDYL--- 126
Query: 446 HTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
R + L + + +GMAYLH + H L + NVLLD + D+
Sbjct: 127 ---PRHSIGLAQLLLFAQQICEGMAYLHAQH----YIHRDLAARNVLLDNDRLVKIGDFG 179
Query: 506 LRPLINPDNAHTLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L + + + V + +PE K SDVWS G+ + ELLT
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N ++ F + D+ + R + D L V + S
Sbjct: 175 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 87/215 (40%), Gaps = 30/215 (13%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
EV+G G F + + GQ + VK ++ + ED + L+HP++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL--KIIKGVVKGMAY 471
+ L Y +++EF++ L ++ + G + + ++ +++ + Y
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIV---KRADAGFVYSEAVASHYMRQILEALRY 145
Query: 472 LHNELPGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA------- 521
H+ + I H +K NVLL + S L D+ + + +VA
Sbjct: 146 CHD----NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG----LVAGGRVGTP 197
Query: 522 -YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE K DVW G+++ LL+G P
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 23/163 (14%)
Query: 81 EQMNLSGT-IAAESLGLLSSLRAVSFMN---NKFE----GPLPDLRKMGPLKSIYLSDNG 132
E+++L T +A S L ++++N N+ + G DL ++G L L++N
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG---LANNQ 94
Query: 133 FSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLV-QLPKLMELRLEANKFQGQVPE--- 188
+ ++ F+ +T L KLY+ N+L ++PS + +L KL ELRL N+ Q +P
Sbjct: 95 LA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAF 151
Query: 189 IKQNEMRSLGLANNELEGPIP----ESLSKMDPSTFAGNKNLC 227
K +++L L+ N+L+ +P + L K+ T GN+ C
Sbjct: 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDC 193
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 45/227 (19%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVKRYK----QMNNVGREDF------QEHIKRL--GRL 408
VLG G FG K + + + Y +K+ + +++ + E +++ R L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 409 EHPNLL-PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
E N + P+TA +K + E+ EN +L +H+ + Q+ W ++ + +++
Sbjct: 73 ERRNFVKPMTAVK-KKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN-------------PDN 514
++Y+H++ I H LK N+ +D S + D+ L ++ P +
Sbjct: 128 ALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 515 AHTLMVAYKSPEYAH------NGKISKKSDVWSLGILILELLTGKYP 555
+ L A + Y G ++K D++SLGI+ E++ YP
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
++ +++G+ Y+H+ + I H LK SNV ++ E + D+ L D T V
Sbjct: 128 LVYQLLRGLKYIHS----AGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYV 181
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELL GK
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 363 LGSGTFGASYKTV-ISNGQAYVVKRYK--QMNNVGREDFQEHIKRLGRLEH-PNLLPLTA 418
LG G + ++ + I+N + VVK K + N + RE IK L L PN++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKRE-----IKILENLRGGPNIITLAD 99
Query: 419 FYYRKEEKL--LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+ L++E V N +L+ T D+ R + + ++K + Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFK-QLYQTLT------DYDIRFYMYE-ILKALDYCH--- 148
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTLMVA---YKSPEYAHNGK 532
I H +K NV++D L L D+ L +P + + VA +K PE + +
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 533 ISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKASL 569
+ S D+WSLG ++ ++ K P G+D+ L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQL 242
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 23/163 (14%)
Query: 81 EQMNLSGT-IAAESLGLLSSLRAVSFMN---NKFE----GPLPDLRKMGPLKSIYLSDNG 132
E+++L T +A S L ++++N N+ + G DL ++G L L++N
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG---LANNQ 94
Query: 133 FSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLV-QLPKLMELRLEANKFQGQVPE--- 188
+ ++ F+ +T L KLY+ N+L ++PS + +L KL ELRL N+ Q +P
Sbjct: 95 LA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAF 151
Query: 189 IKQNEMRSLGLANNELEGPIP----ESLSKMDPSTFAGNKNLC 227
K +++L L+ N+L+ +P + L K+ T GN+ C
Sbjct: 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDC 193
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 360 AEVLGSGTFGASYK-TVISNGQAYVVKRY--KQMNNVGREDFQE----HIKRLGRL-EHP 411
+ LG+G FG + T G+ V + K + + D +E +K + L +H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAG----KLHANHTKQ--RPGLDWQTRLKIIKGV 465
N++ L L++ E+ G L K A+ K+ RP L+ + L V
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQV 161
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNA-----HTLM 519
+GMA+L ++ + I H + + NVLL + D+ L R ++N N L
Sbjct: 162 AQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 520 VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D+ L + D+ V
Sbjct: 150 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXV 203
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
++ +++G+ Y+H+ + I H LK SNV ++ E + D+ L D T V
Sbjct: 136 LVYQLLRGLKYIHS----AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELL GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E LG G F + + I GQ Y K K+++ + + + L+HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ + + H L
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCH--LN 122
Query: 478 GSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
G I H LK N+LL + L D+ L + D A Y SPE
Sbjct: 123 G--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 181 DPYGKPVDMWACGVILYILLVG-YP 204
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E LG G F + + I GQ Y K K+++ + + + L+HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ + + H L
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCH--LN 122
Query: 478 GSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
G I H LK N+LL + L D+ L + D A Y SPE
Sbjct: 123 G--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 181 DPYGKPVDMWACGVILYILLVG-YP 204
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 358 ASAEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQE-HIKRLGRLEHPNLLPL 416
A E +G G +G ++ + +G++ VK + + + F+E I L H N+L
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDE--QSWFRETEIYNTVLLRHDNILGF 67
Query: 417 TAFYYRKE----EKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
A + L+ + E+GSL L QR L+ L++ G+A+L
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL------QRQTLEPHLALRLAVSAACGLAHL 121
Query: 473 HNELPGS----IIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP--------DNAHTLMV 520
H E+ G+ I H KS NVL+ + + + D L + + +N
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 521 AYKSPEYAHNG------KISKKSDVWSLGILILEL 549
Y +PE + K +D+W+ G+++ E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 22/207 (10%)
Query: 363 LGSGTFGASYKTV---ISNGQAYVVKRYKQMNNVG----REDFQEHIKRLGRLEHPNLLP 415
LG G+FG Y+ V + + K +N R +F + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHA--NHTKQRPGLDWQTRLKIIK---GVVKGMA 470
L + + L++ E + G L L + + P L + K+I+ + GMA
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNAHT-----LMVAYKS 524
YL+ + H L + N + F + D+ + R + D L V + S
Sbjct: 140 YLN----ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 525 PEYAHNGKISKKSDVWSLGILILELLT 551
PE +G + SDVWS G+++ E+ T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
++ +++G+ Y+H+ + I H LK SNV ++ E + D+ L D T V
Sbjct: 136 LVYQLLRGLKYIHS----AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV 189
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELL GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + D L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 360 AEVLGSGTFGASYK-TVISNGQAYVVKRY--KQMNNVGREDFQE----HIKRLGRL-EHP 411
+ LG+G FG + T G+ V + K + + D +E +K + L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAG----KLHANHTKQ--RPGLDWQTRLKIIKGV 465
N++ L L++ E+ G L K A+ K+ RP L+ + L V
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQV 169
Query: 466 VKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNA-----HTLM 519
+GMA+L ++ + I H + + NVLL + D+ L R ++N N L
Sbjct: 170 AQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 520 VAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV 520
+I +++G+ Y+H+ + I H LK SN+ ++ E + + L + D+ T V
Sbjct: 130 LIYQILRGLKYIHS----ADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYV 183
Query: 521 A---YKSPEYAHNG-KISKKSDVWSLGILILELLTGK 553
A Y++PE N ++ D+WS+G ++ ELLTG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 138 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 135 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK 460
H+ +L HPN++P A + E ++ F+ GS A L H G++
Sbjct: 78 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGS-AKDLICTHFMD--GMNELAIAY 132
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLD----------RSFEPLLTDYALRPLI 510
I++GV+K + Y+H+ G + H +K+S++L+ RS +++ + ++
Sbjct: 133 ILQGVLKALDYIHHM--GYV--HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 511 NPDNAHTLMV-AYKSPEYAHNG--KISKKSDVWSLGILILELLTGKYP 555
+ +++ V + SPE KSD++S+GI EL G P
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK 460
H+ +L HPN++P A + E ++ F+ GS A L H G++
Sbjct: 62 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGS-AKDLICTHFMD--GMNELAIAY 116
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLD----------RSFEPLLTDYALRPLI 510
I++GV+K + Y+H+ G + H +K+S++L+ RS +++ + ++
Sbjct: 117 ILQGVLKALDYIHHM--GYV--HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 172
Query: 511 NPDNAHTLMV-AYKSPEYAHNG--KISKKSDVWSLGILILELLTGKYP 555
+ +++ V + SPE KSD++S+GI EL G P
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 92/228 (40%), Gaps = 47/228 (20%)
Query: 362 VLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLL------ 414
VLG G FG K + + + Y +K+ + E + L L H ++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSE-VXLLASLNHQYVVRYYAAW 71
Query: 415 --------PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
P TA +K + E+ EN +L +H+ + Q+ W ++ + ++
Sbjct: 72 LERRNFVKPXTAVK-KKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQIL 126
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLIN-------------PD 513
+ ++Y+H++ I H +LK N+ +D S + D+ L ++ P
Sbjct: 127 EALSYIHSQG----IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 514 NAHTLMVAYKSPEYAH------NGKISKKSDVWSLGILILELLTGKYP 555
++ L A + Y G ++K D +SLGI+ E + YP
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YP 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 135 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L++L+ + +N + LPD R +G L ++L N ++ + AF G+ SL +L +
Sbjct: 127 LAALQYLYLQDNNLQA-LPDNTFRDLGNLTHLFLHGNRIP-SVPEHAFRGLHSLDRLLLH 184
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKF 182
N + P + L +LM L L AN
Sbjct: 185 QNHVARVHPHAFRDLGRLMTLYLFANNL 212
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 117 LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELR 176
R +G L +++L G + F G+ +L+ LY+ +N L ++ L L L
Sbjct: 100 FRGLGHLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLF 158
Query: 177 LEANKFQGQVPEIKQNEMRSL 197
L N+ +P + ++ R L
Sbjct: 159 LHGNR----IPSVPEHAFRGL 175
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 360 AEVLGSGTFGASYK-TVISNGQAYVVKRY--KQMNNVGREDFQE----HIKRLGRL-EHP 411
+ LG+G FG + T G+ V + K + + D +E +K + L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 412 NLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTR------------- 458
N++ L L++ E+ G L L K+ PGL++
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR---RKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 459 -LKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNA- 515
L V +GMA+L ++ + I H + + NVLL + D+ L R ++N N
Sbjct: 168 LLHFSSQVAQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 516 ----HTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 75 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 128
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 129 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 75 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 128
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 129 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E LG G F + V + GQ Y K K+++ + + + L+HPN++ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ A LH
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE--AVLHCHQM 140
Query: 478 GSIIPHGHLKSSNVLLDRSFEPL---LTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
G + H LK N+LL + L D+ L + + A Y SPE
Sbjct: 141 GVV--HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 199 DPYGKPVDLWACGVILYILLVG-YP 222
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NVL+D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 75 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 128
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 129 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KII-------KGVV-------KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ K +V +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 81 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 134
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 135 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 74 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 127
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 128 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAH----------NGK 532
H +K NVLLD + L D+ +N D VA +P+Y GK
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
+ D WSLG+ + E+L G+ P
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETP 296
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 363 LGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLEHPNLLPLTA 418
LG GT+G YK + + + +KR + + V +E + L L+H N++ L +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE-VSLLKELQHRNIIELKS 100
Query: 419 FYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPG 478
+ L++E+ EN + + P + + + ++ G+ + H+
Sbjct: 101 VIHHNHRLHLIFEYAENDL------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR-- 152
Query: 479 SIIPHGHLKSSNVLL---DRSFEPLLT--DYAL-RPLINPDNAHT---LMVAYKSPEYAH 529
H LK N+LL D S P+L D+ L R P T + + Y+ PE
Sbjct: 153 --CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILL 210
Query: 530 NGK-ISKKSDVWSLGILILELL 550
+ S D+WS+ + E+L
Sbjct: 211 GSRHYSTSVDIWSIACIWAEML 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 78
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 79 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 133
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 134 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEYAH----------NGK 532
H +K NVLLD + L D+ +N D VA +P+Y GK
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
+ D WSLG+ + E+L G+ P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N L T ++ +
Sbjct: 200 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQ 253
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 254 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 342
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMRIADFG 202
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 17/168 (10%)
Query: 396 EDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
+DF + + L+H NL+ L K++ E GSL +L + G
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 115
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
T + V +GM YL ++ H L + N+LL + D+ L + ++
Sbjct: 116 -TLSRYAVQVAEGMGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 516 HTLM-------VAYKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
H +M A+ +PE S SD W G+ + E+ T G+ P
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 84 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 138
Query: 460 KII-------KGVV-------KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ K +V +GM YL ++ H L + NVL+ + + D+
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 194
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 195 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 81 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 135
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 191
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 192 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 360 AEVLGSGTFG----ASYKTVISNGQAYVVKRYKQMNNVGRE-----DFQEHIKRLGRLEH 410
++ LGSG G A + ++ + K RE + + I+ L +L H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 411 PNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P ++ + F+ E+ ++ E +E G L K+ N + +L + ++ +
Sbjct: 214 PCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLL-AVQ 267
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLL---TDYALRPLINPDNAHTLMV---AYKS 524
YLH + I H LK NVLL E L TD+ ++ + + Y +
Sbjct: 268 YLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 525 PEY---AHNGKISKKSDVWSLGILILELLTGKYP 555
PE ++ D WSLG+++ L+G YP
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YP 356
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 23/209 (11%)
Query: 360 AEVLGSGTFGASYKTVISNGQ-AYVVKRYKQMNNVGRED---FQEHIKRLGRLEHPNLLP 415
+V+G G FG Q Y +K + + R D F E + P ++
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 416 LTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
L + + ++ E++ G L + ++ + + + + M +H +
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 199
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEY-------- 527
+ K N+LLD+ L D+ ++ A +P+Y
Sbjct: 200 V----------KPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 528 -AHNGKISKKSDVWSLGILILELLTGKYP 555
+G ++ D WS+G+ + E+L G P
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 21/168 (12%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++
Sbjct: 79 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 133
Query: 456 ------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL 509
Q K + +A L H L + NVL+ + + D+ L
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 510 INPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 68
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 123
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 124 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 158
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 159 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 127
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 128 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 139
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 140 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 143
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 144 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 135 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 189
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 190 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 246
Query: 569 L 569
L
Sbjct: 247 L 247
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 129 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 240
Query: 569 L 569
L
Sbjct: 241 L 241
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 128 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 239
Query: 569 L 569
L
Sbjct: 240 L 240
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 78
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 79 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 133
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 134 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 129 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 240
Query: 569 L 569
L
Sbjct: 241 L 241
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD-NAHTLM 519
++ ++KG+ Y+H+ + + H LK N+ ++ E + D+ L + + + +
Sbjct: 149 LVYQMLKGLKYIHS----AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 204
Query: 520 VAYKSPE----YAHNGKISKKSDVWSLGILILELLTGK 553
Y++PE + H ++ D+WS+G ++ E+LTGK
Sbjct: 205 RWYRAPEVILSWMH---YNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H+ I H +K NV++D L L D+ L +P
Sbjct: 130 DYDIRFYMYE-ILKALDYCHS----MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + ++ S D+WSLG ++ ++ K P G+D+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQ 241
Query: 569 L 569
L
Sbjct: 242 L 242
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 138 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 192
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 248
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L IN + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 249 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 72
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 73 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 127
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 128 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 450 RPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RP 508
RP L+ + L V +GMA+L ++ + I H + + NVLL + D+ L R
Sbjct: 153 RP-LELRDLLHFSSQVAQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 509 LINPDNA-----HTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
++N N L V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ +L H N++ + + +L E + G L L T+ RP L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 155
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 156 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL 459
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG+++ +
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEYSYDI 146
Query: 460 KIIK--------------GVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 L-RPLINPDNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L R + N D L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQ-----AYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +++ + + ++ + + +++P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 167
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 168 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 37/221 (16%)
Query: 360 AEVLGSGT----FGASYKTVISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLL 414
+++LG G F +K G + +K + ++ + D Q + L +L H N++
Sbjct: 14 SDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 415 PLTAFYYRK--EEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L A K+L+ EF GSL L GL L +++ VV GM
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGM--- 125
Query: 473 HNELPGSIIPHGHLKSSNVLL----DRSFEPLLTDY-ALRPLINPDNAHTLMVAYKSPEY 527
N L + I H ++K N++ D LTD+ A R L ++ + Y + EY
Sbjct: 126 -NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVXLYGTEEY 181
Query: 528 -------------AHNGKISKKSDVWSLGILILELLTGKYP 555
H K D+WS+G+ TG P
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD-NAHTLM 519
++ ++KG+ Y+H+ + + H LK N+ ++ E + D+ L + + + +
Sbjct: 131 LVYQMLKGLKYIHS----AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 186
Query: 520 VAYKSPE----YAHNGKISKKSDVWSLGILILELLTGK 553
Y++PE + H ++ D+WS+G ++ E+LTGK
Sbjct: 187 RWYRAPEVILSWMH---YNQTVDIWSVGCIMAEMLTGK 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 68
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 123
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 124 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNA-----HTL 518
V +GMA+L ++ + I H + + NVLL + D+ L R ++N N L
Sbjct: 173 VAQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ +L H N++ + + +L E + G L L T+ RP L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 141
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 142 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 361 EVLGSGTFGA---------SYKTV---ISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
E LG G+FG S KTV + + V+ + + M+ DF + + L
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHSL 68
Query: 409 EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKG 468
+H NL+ L K++ E GSL +L + G T + V +G
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEG 123
Query: 469 MAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLM-------VA 521
M YL ++ H L + N+LL + D+ L + ++ H +M A
Sbjct: 124 MGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLT-GKYP 555
+ +PE S SD W G+ + E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINPDNA-----HTL 518
V +GMA+L ++ + I H + + NVLL + D+ L R ++N N L
Sbjct: 173 VAQGMAFLASK---NCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS GIL+ E+ +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 360 AEVLGSGTFGASYKTVISN-----GQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPN 412
+ LG G FG K + G V + + N E D L ++ HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG------------LDWQTRLK 460
++ L + LL+ E+ + GSL G L + K PG LD
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR-KVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 461 IIKG--------VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP 512
+ G + +GM YL + H L + N+L+ + ++D+ L +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE----MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 513 DNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
++++ + V + + E + + +SDVWS G+L+ E++T
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 444 ANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LT 502
AN +Q P L+ RL + + +++G+ Y+H+ + + H LK +N+ ++ L +
Sbjct: 109 ANVLEQGPLLEEHARLFMYQ-LLRGLKYIHS----ANVLHRDLKPANLFINTEDLVLKIG 163
Query: 503 DYALRPLINPDNAHTLMVA-------YKSPEYAHN-GKISKKSDVWSLGILILELLTGK 553
D+ L +++P +H ++ Y+SP + +K D+W+ G + E+LTGK
Sbjct: 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY--VVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E LG G F + V + GQ Y ++ K+++ + + + L+HPN++ L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ A LH
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE--AVLHCHQM 129
Query: 478 GSIIPHGHLKSSNVLLDRSFEPL---LTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
G + H +LK N+LL + L D+ L + + A Y SPE
Sbjct: 130 GVV--HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 188 DPYGKPVDLWACGVILYILLVG-YP 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VL SG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 95 GLLSSLRAVSFMNNKFEGPLPDLR-------KMGPLKSIYLSD----------NGFSGNI 137
LL S ++F++++ P+P+LR + L SD N +
Sbjct: 68 SLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVV 127
Query: 138 SDDAFEGMTSLKKLYMANNRLTGTIPSSLV----QLPKLMELRLEANKFQ 183
+AFE M L+KLY++ N+++ P L+ +LPKLM L L +NK +
Sbjct: 128 DRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLD----- 454
E +K +G+ H N++ L + ++ E+ G+L L A ++ PG++
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA---RRPPGMEXSYDI 146
Query: 455 ---------WQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
++ + + +GM YL ++ H L + NVL+ + + D+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFG 202
Query: 506 L-RPLINPDNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L R + N D L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 85 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---REPPGLEYSYNP 139
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 195
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L++ + + G L + H ++ + L+W + + KGM YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 138 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 126 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYSYNP 180
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 236
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPRPSQPSSLAML 140
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 141 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 243
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 132
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 133 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 235
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 140
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 141 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 243
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + +GM YL
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYL 130
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 131 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 85 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYCYNP 139
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 195
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 85 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYSYNP 139
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 195
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 37/221 (16%)
Query: 360 AEVLGSGT----FGASYKTVISNGQAYVVKRYKQMNNVGREDFQ-EHIKRLGRLEHPNLL 414
+++LG G F +K G + +K + ++ + D Q + L +L H N++
Sbjct: 14 SDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 415 PLTAFYYRK--EEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L A K+L+ EF GSL L GL L +++ VV GM
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGM--- 125
Query: 473 HNELPGSIIPHGHLKSSNVLL----DRSFEPLLTDY-ALRPLINPDNAHTLMVAYKSPEY 527
N L + I H ++K N++ D LTD+ A R L ++ + Y + EY
Sbjct: 126 -NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSLYGTEEY 181
Query: 528 -------------AHNGKISKKSDVWSLGILILELLTGKYP 555
H K D+WS+G+ TG P
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPRPSQPSSLAML 155
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 156 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 38/225 (16%)
Query: 360 AEVLGSGTFGASYKTVISN-----GQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPN 412
+ LG G FG K + G V + + N E D L ++ HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG------------LDWQTRLK 460
++ L + LL+ E+ + GSL G L + K PG LD
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR-KVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 461 IIKG--------VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP 512
+ G + +GM YL S++ H L + N+L+ + ++D+ L +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---SLV-HRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 513 DNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+++ + V + + E + + +SDVWS G+L+ E++T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 77 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYSYNP 131
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 187
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 188 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 78 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYSYNP 132
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 188
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 189 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 74 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYSYNP 128
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 184
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 185 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 141
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 142 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 70 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEYCYNP 124
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 180
Query: 506 LRPLINPDNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L I+ + + L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 158
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 159 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 261
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 157
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 158 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 260
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 45/223 (20%)
Query: 360 AEVLGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLL----- 414
E++G G FG Y A + ++ N + F+ + + H N++
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 415 ----PLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMA 470
P A + LY V + + L N T+Q I + +VKGM
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIV--LDVNKTRQ-----------IAQEIVKGMG 144
Query: 471 YLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPL------------INPDNAHTL 518
YLH I H LKS NV D + ++TD+ L + + N
Sbjct: 145 YLH----AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 519 MVAYK-----SPEYAHNG-KISKKSDVWSLGILILELLTGKYP 555
+A + SP+ + SK SDV++LG + EL ++P
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 126 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 180
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 181 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 237
Query: 569 L 569
L
Sbjct: 238 L 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 38/225 (16%)
Query: 360 AEVLGSGTFGASYKTVISN-----GQAYVVKRYKQMNNVGRE--DFQEHIKRLGRLEHPN 412
+ LG G FG K + G V + + N E D L ++ HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG------------LDWQTRLK 460
++ L + LL+ E+ + GSL G L + K PG LD
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR-KVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 461 IIKG--------VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINP 512
+ G + +GM YL + H L + N+L+ + ++D+ L +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE----MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 513 DNAHT------LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+++ + V + + E + + +SDVWS G+L+ E++T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 396 EDFQEHIKRLGRLEHPNLLPLTAFYYRKEEKLL--LYEFVENGSLAGKLHANHTKQRPGL 453
E + I L +L+HPN++ L E L ++E V G + +P
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM-----EVPTLKPLS 135
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD 513
+ Q R + ++KG+ YLH + I H +K SN+L+ + D+ +
Sbjct: 136 EDQARF-YFQDLIKGIEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 514 NA---HTLMV-AYKSPE-YAHNGKI--SKKSDVWSLGILILELLTGKYP 555
+A +T+ A+ +PE + KI K DVW++G+ + + G+ P
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 181
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 182 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 284
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQ-------MNNVGREDFQEHIKRLGRLEHPN 412
E +GSG FG+ +K V +G Y +KR K+ N RE + + LG +H +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--LG--QHSH 70
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ + + + L+ E+ GSLA + N+ + + + +++ V +G+ Y+
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ-VGRGLRYI 129
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEP 499
H+ + H +K SN+ + R+ P
Sbjct: 130 HS----MSLVHMDIKPSNIFISRTSIP 152
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQ-------MNNVGREDFQEHIKRLGRLEHPN 412
E +GSG FG+ +K V +G Y +KR K+ N RE + + LG +H +
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--LG--QHSH 72
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ + + + L+ E+ GSLA + N+ + + + +++ V +G+ Y+
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ-VGRGLRYI 131
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEP 499
H+ + H +K SN+ + R+ P
Sbjct: 132 HS----MSLVHMDIKPSNIFISRTSIP 154
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
+ +GM YL ++ H L + NVL+ + + D+ L IN + + L
Sbjct: 166 LARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQ-------MNNVGREDFQEHIKRLGRLEHPN 412
E +GSG FG+ +K V +G Y +KR K+ N RE + + LG +H +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--LG--QHSH 70
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ + + + L+ E+ GSLA + N+ + + + +++ V +G+ Y+
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ-VGRGLRYI 129
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEP 499
H+ + H +K SN+ + R+ P
Sbjct: 130 HS----MSLVHMDIKPSNIFISRTSIP 152
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 141
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 142 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 483 HGHLKSSNVLLDRS--FEPLLTDYALRPLINPDNAHTLMVAYKSPEYAHNGKI------- 533
HG +K+SN+LL+ + L DY L P+ H A P+ H+G I
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA--DPKRCHDGTIEFTSIDA 232
Query: 534 ------SKKSDVWSLGILILELLTGKYP 555
S++ D+ LG +++ LTG P
Sbjct: 233 HNGVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT------L 518
+ +GM YL ++ H L + NVL+ + + D+ L IN + + L
Sbjct: 166 LARGMEYLASQK----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 147
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 148 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 250
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 125 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 180 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 236
Query: 569 L 569
L
Sbjct: 237 L 237
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 400 EHIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW---- 455
E +K +G+ H N++ L + ++ E+ G+L L A ++ PGL++
Sbjct: 85 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA---RRPPGLEFSFNP 139
Query: 456 ----------QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYA 505
+ + V +GM YL ++ H L + NVL+ + D+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVLVTEDNVMKIADFG 195
Query: 506 L-RPLINPDNAHT-----LMVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
L R + + D L V + +PE + + +SDVWS G+L+ E+ T
Sbjct: 196 LARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 145 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 199
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 200 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 256
Query: 569 L 569
L
Sbjct: 257 L 257
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 66/237 (27%)
Query: 363 LGSGTFGASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFYYR 422
+GSG FG Y +N K K +V + ++QE+ L+ FY R
Sbjct: 45 IGSGGFGLIYLAFPTN------KPEKDARHVVKVEYQENGPLFSELK---------FYQR 89
Query: 423 KEEKLLLYEFVENGSL----------------AGKLHANHTKQRPGLDWQ---------- 456
+K + +++E L G+ + +R G+D Q
Sbjct: 90 VAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFK 149
Query: 457 --TRLKIIKGVVKGMAYLH-NELPGSIIPHGHLKSSNVLLDRS--FEPLLTDYALRPLIN 511
T L++ ++ + Y+H NE HG +K++N+LL + L DY L
Sbjct: 150 KSTVLQLGIRMLDVLEYIHENEYV-----HGDIKAANLLLGYKNPDQVYLADYGLSYRYC 204
Query: 512 PDNAHTLMVAYKSPEYAHNGKI-------------SKKSDVWSLGILILELLTGKYP 555
P+ H ++P HNG I S++SDV LG +L L GK P
Sbjct: 205 PNGNHKQYQ--ENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VL SG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 361 EVLGSGTFGASYKTVIS-NGQAYVVKRYKQ-------MNNVGREDFQEHIKRLGRLEHPN 412
E +GSG FG+ +K V +G Y +KR K+ N RE + + LG +H +
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--LG--QHSH 68
Query: 413 LLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ + + + L+ E+ GSLA + N+ + + + +++ V +G+ Y+
Sbjct: 69 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ-VGRGLRYI 127
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEP 499
H+ + H +K SN+ + R+ P
Sbjct: 128 HS----MSLVHMDIKPSNIFISRTSIP 150
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 127 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 180
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 230
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 135 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 188
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 238
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 125 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 180 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 236
Query: 569 L 569
L
Sbjct: 237 L 237
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R I + ++K + Y H++ I H +K NV++D L L D+ L +P
Sbjct: 124 DYDIRYYIYE-LLKALDYCHSQ----GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDSKAS 568
+ + VA +K PE + + S D+WSLG + ++ K P G+D+
Sbjct: 179 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQ 235
Query: 569 L 569
L
Sbjct: 236 L 236
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 126 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 179
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISN----GQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + A +K K + RE F + + + +HP+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 132 ----FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 125 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 178
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 26/207 (12%)
Query: 362 VLGSGTFGASYKTVISNGQA----YVVKRYKQMNNVGREDFQEHI---KRLGRLEHPNLL 414
VLG G+FG K ++++ + Y +K K+ + +D + + + L L+ P L
Sbjct: 26 VLGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 415 PLTAFYYRKEEKL-LLYEFVENGSLAGKLH-ANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
++ ++L + E+V G L + K+ + + + I G+ +L
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFL 136
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYA 528
H II + LK NV+LD + D+ + D T Y +PE
Sbjct: 137 HKR---GII-YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII 192
Query: 529 HNGKISKKSDVWSLGILILELLTGKYP 555
K D W+ G+L+ E+L G+ P
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 121 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 174
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 165 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 218
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 268
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 120 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 173
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VL SG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 119 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 172
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAY----VVKRYKQMNN-VGREDFQEHIKRLGRLEHPNLL 414
+VLGSG FG YK + I G+ +K ++ + ++ + + +++P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 415 PLTAFYYRKEEKLLLYEFVENGSLAGKL--HANHTKQRPGLDWQTRLKIIKGVVKGMAYL 472
L +L+ + + G L + H ++ + L+W + + KGM YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 473 HNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSP------E 526
+ + H L + NVL+ +TD+ L+ + K P E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 527 YAHNGKISKKSDVWSLGILILELLT 551
+ + +SDVWS G+ + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 155
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 156 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 121 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 174
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 119 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 172
Query: 515 AHT---LMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I+K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 171 EIMKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 224
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D+WSLG+++ LL G YP Y G
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHG 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISN----GQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + A +K K + RE F + + + +HP+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 132 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%)
Query: 351 DLQDMLRASAEV---LGSGTFGASYKTVIS---NGQAYVVKRYKQMNNVGRE----DFQE 400
DL+++ R + + LG G FG Y+ +S N + + K + V E DF
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPG----LDWQ 456
+ + H N++ + + +L E + G L L T+ RP L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRPSQPSSLAML 167
Query: 457 TRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLT---DYALRPLI--- 510
L + + + G YL + H + + N LL + D+ + I
Sbjct: 168 DLLHVARDIACGCQYLEE----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 511 ---NPDNAHTLMVAYKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
L V + PE G + K+D WS G+L+ E+ + Y
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 270
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 428 LLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGS----IIPH 483
L+ ++ ENGSL L + LD ++ LK+ V G+ +LH E+ + I H
Sbjct: 112 LITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 484 GHLKSSNVLLDRSFEPLLTDYAL 506
LKS N+L+ ++ + D L
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGL 188
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTVISN-GQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E LG G F + V Q Y K K+++ + + + L+HPN++ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I +++ + ++H
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIHQILESVNHIHQH-- 149
Query: 478 GSIIPHGHLKSSNVLLDRSFEPL---LTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
I H LK N+LL + L D+ L + + A Y SPE
Sbjct: 150 --DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 208 DPYGKPVDIWACGVILYILLVG-YP 231
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 74 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 129 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 185 RFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 79 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 134 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 190 RFTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 105 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 160 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 216 RFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 82 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 137 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 193 RFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 132 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISNGQ----AYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + + A +K K + RE F + + + +HP+++ L
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 80 IGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 135 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 191 RFTSASDVWMFGVCMWEIL 209
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 174 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 227
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 228 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 285
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 286 NLELNENQLEDISPIS 301
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 179 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 232
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 233 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 290
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 291 NLELNENQLEDISPIS 306
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEY----------AHNGK 532
H +K N+L+D + L D+ + D VA +P+Y G+
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 533 ISKKSDVWSLGILILELLTGKYP 555
+ D WSLG+ + E+L G+ P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 175 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 228
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 229 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 286
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 287 NLELNENQLEDISPIS 302
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 175 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 228
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 229 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 286
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 287 NLELNENQLEDISPIS 302
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 178 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 231
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 232 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 289
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 290 NLELNENQLEDISPIS 305
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 175 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 228
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 229 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 286
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 287 NLELNENQLEDISPIS 302
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 80 LEQMNLSGTIAAE--SLGLLSSLRAVSFMNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNI 137
LE++++S ++ L L++L ++ NN+ D+ +G L + L + +GN
Sbjct: 174 LERLDISSNKVSDISVLAKLTNLESLIATNNQIS----DITPLGILTN--LDELSLNGNQ 227
Query: 138 SDD--AFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEIKQNEMR 195
D +T+L L +ANN+++ P L L KL EL+L AN+ P +
Sbjct: 228 LKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 285
Query: 196 SLGLANNELEGPIPES 211
+L L N+LE P S
Sbjct: 286 NLELNENQLEDISPIS 301
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
EV+G G F + + GQ + VK ++ + ED + L+HP++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL--KIIKGVVKGMAY 471
+ L Y +++EF++ L ++ + G + + ++ +++ + Y
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEI---VKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 472 LHNELPGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA------- 521
H+ + I H +K VLL + S L + + + +VA
Sbjct: 148 CHD----NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGTP 199
Query: 522 -YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE K DVW G+++ LL+G P
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H++ I H +K NV++D + L L D+ L +P
Sbjct: 131 DFDIRFYMYE-LLKALDYCHSK----GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP 185
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDS 565
+ + VA +K PE + ++ S D+WSLG ++ ++ + P + YD
Sbjct: 186 AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 242
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISN----GQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + A +K K + RE F + + + +HP+++ L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 512 ----FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 454 DWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP 512
D+ R + + ++K + Y H++ I H +K NV++D + L L D+ L +P
Sbjct: 136 DFDIRFYMYE-LLKALDYCHSK----GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP 190
Query: 513 DNAHTLMVA---YKSPEYAHNGKISKKS-DVWSLGILILELLTGKYPENYLLQGYDS 565
+ + VA +K PE + ++ S D+WSLG ++ ++ + P + YD
Sbjct: 191 AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 247
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISN----GQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + A +K K + RE F + + + +HP+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + L + + +PE +
Sbjct: 132 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFR 187
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 360 AEVLGSGTFGASYKTV-ISNGQAYVVK-----RYKQMNNVGREDFQEHIKRLGRLEHPNL 413
EV+G G F + + GQ + VK ++ + ED + L+HP++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 414 LPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRL--KIIKGVVKGMAY 471
+ L Y +++EF++ L ++ + G + + ++ +++ + Y
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI---VKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 472 LHNELPGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA------- 521
H+ + I H +K VLL + S L + + + +VA
Sbjct: 146 CHD----NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGTP 197
Query: 522 -YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
+ +PE K DVW G+++ LL+G P
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 20/205 (9%)
Query: 361 EVLGSGTFGASYKTV-ISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLT 417
E +G G F + V + G Y K K+++ + + + L+H N++ L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 418 AFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELP 477
+ L+++ V G L + A I+ +++ A LH
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE--AVLHCHQM 122
Query: 478 GSIIPHGHLKSSNVLLDRSFEPL---LTDYALRPLINPDNAHTLMVA----YKSPEYAHN 530
G + H LK N+LL + L D+ L + D A Y SPE
Sbjct: 123 GVV--HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
K D+W+ G+++ LL G YP
Sbjct: 181 EAYGKPVDIWACGVILYILLVG-YP 204
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 91 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 138
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 139 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 188
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 104 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 151
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 152 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 201
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 91 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 138
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 139 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 188
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 104 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 151
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 152 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 201
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 110 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 157
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 158 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 207
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 103 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 150
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 151 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 200
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 104 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 151
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 152 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 201
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 91 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 138
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 139 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 188
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 90 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 137
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 138 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 187
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVIS----NGQAYVVKRYKQMNNVGREDFQ 399
RD M+ D ++ VLG G+FG K ++S + Y VK K+ + +D +
Sbjct: 14 RDRMKLTDFNFLM-----VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVE 65
Query: 400 EHI--KRLGRL--EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
+ KR+ L + P L L + + + + E+V G L H +Q
Sbjct: 66 CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGRFKE 120
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
+ + G+ +L ++ II + LK NV+LD + D+ + D
Sbjct: 121 PHAVFYAAEIAIGLFFLQSK---GII-YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176
Query: 516 HTLMVA----YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
T Y +PE K D W+ G+L+ E+L G+ P
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 90 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 137
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 138 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 187
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 104 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 151
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 152 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 201
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 103 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 150
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 151 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 200
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 76 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 123
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 124 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 173
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 103 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 150
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 151 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 200
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 118 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 165
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 166 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 215
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 75 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 122
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 123 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 172
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 76 VIRLLDWFERPDSFVLIL--ERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 123
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 124 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 173
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 76 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 123
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 124 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 173
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 362 VLGSGTFGASYKTVISN----GQAYVVKRYKQMNNVG-REDFQEHIKRLGRLEHPNLLPL 416
+G G FG ++ + + A +K K + RE F + + + +HP+++ L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 417 TAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNEL 476
+++ E G L L ++ LD + + + +AYL ++
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 477 PGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHT-----LMVAYKSPEYAHNG 531
H + + NVL+ + L D+ L + + L + + +PE +
Sbjct: 512 ----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 532 KISKKSDVWSLGILILELL 550
+ + SDVW G+ + E+L
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 103 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 150
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 151 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 200
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 98 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 145
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 146 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 195
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 123 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 170
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 171 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 220
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 75 VIRLLDWFERPDSFVL--ILERMEPVQDLFDFITERGALQEELARS-------FFWQ--- 122
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 123 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 172
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 71 VIRLLDWFERPDSFVLIL--ERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 118
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 119 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 168
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L++L + N+ + LP+ K+ LK + L +N + D F+ +T+L LY+
Sbjct: 84 LTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLY 141
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE---IKQNEMRSLGLANNELEGPIPE 210
+N+L +L L L L+ N+ Q +PE K +++ L L +N+L+ +P+
Sbjct: 142 HNQLQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKS-VPD 198
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L++L + NN+ + LP+ K+ LK + L+DN + D F+ +TSL +++
Sbjct: 156 LTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKS-VPDGVFDRLTSLTHIWLL 213
Query: 155 NN 156
NN
Sbjct: 214 NN 215
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 118 VIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 165
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 166 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 215
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 74 VIRLLDWFERPDSFVLIL--ERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 121
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 122 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 171
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 71 VIRLLDWFERPDSFVLIL--ERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 118
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 119 -----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 168
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 20/108 (18%)
Query: 459 LKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL 518
L I + + + +LH++ + H LK SN+ + D+ L ++ D
Sbjct: 167 LHIFIQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 519 MVA----------------YKSPEYAHNGKISKKSDVWSLGILILELL 550
++ Y SPE H S K D++SLG+++ ELL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 361 EVLGSGTFGASY--KTVISNGQAYVVKRYKQMN-NVGREDFQEHIKRLGRLEHPNLL 414
+ +G G FG + K + + Y +KR + N + RE +K L +LEHP ++
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 148 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 148 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 44/163 (26%)
Query: 430 YEFV-ENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKS 488
Y+F+ ENG L +L +H + K+ + K + +LH+ + + H LK
Sbjct: 104 YDFIKENGFLPFRL--DHIR-----------KMAYQICKSVNFLHS----NKLTHTDLKP 146
Query: 489 SNVLLDRS-----FEPLLTDYALRPLINPD-------------NAHTLMVA---YKSPEY 527
N+L +S + P + R LINPD H+ +V+ Y++PE
Sbjct: 147 ENILFVQSDYTEAYNPKIKRDE-RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEV 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
S+ DVWS+G +++E G + +DSK L+
Sbjct: 206 ILALGWSQPCDVWSIGCILIEYYLG----FTVFPTHDSKEHLA 244
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 101 RAVSFMNNKFEG-PLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLT 159
+ + +NK P ++ L+ +YL+DN + F+ + +L+ L++ +N+L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 160 GTIPSSLVQLPKLMELRLEANKFQGQVPEIKQN--EMRSLGLANNELE 205
QL L ELRL+ N+ + P + + ++ L L NEL+
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 142 FEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE 188
F+ +TSLK+L + NN+L + +L +L L+L+ N+ + +VPE
Sbjct: 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPE 198
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 119 KMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLE 178
K+ LK + L +N + + AF+ +T LK L + NN+L + L KL L+L+
Sbjct: 155 KLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213
Query: 179 AN 180
N
Sbjct: 214 EN 215
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 124 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 175
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 39/231 (16%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV----VKRYKQMNNVGREDFQ--EHIKRLGRLEHPNLL 414
+V+G G+FG K +V V+ K+ + E+ + EH+++ + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 415 P-LTAFYYRKEEKLL-------LYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
L F +R + LYE ++ G L +++
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----------------FSLPLVRKFA 206
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEP--LLTDYALRPLINPDNAHTLMVA--Y 522
+ + L + I H LK N+LL + + D+ +T + + Y
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFY 265
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWV 573
++PE + D+WSLG ++ ELLTG YP LL G D L+ +
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG-YP---LLPGEDEGDQLACMI 312
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 202 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 80 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 131
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 132 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 126 IYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQ 185
+ L+DN SD F + L KL + N+LTG P++ + EL+L NK
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK---- 89
Query: 186 VPEIKQ------NEMRSLGLANNELEGPIPESLSKMDPST 219
+ EI +++++L L +N++ +P S ++ T
Sbjct: 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 39/231 (16%)
Query: 361 EVLGSGTFGASYKTVISNGQAYV----VKRYKQMNNVGREDFQ--EHIKRLGRLEHPNLL 414
+V+G G+FG K +V V+ K+ + E+ + EH+++ + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 415 P-LTAFYYRKEEKLL-------LYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVV 466
L F +R + LYE ++ G L +++
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----------------FSLPLVRKFA 206
Query: 467 KGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEP--LLTDYALRPLINPDNAHTLMVA--Y 522
+ + L + I H LK N+LL + + D+ +T + + Y
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFY 265
Query: 523 KSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWV 573
++PE + D+WSLG ++ ELLTG YP LL G D L+ +
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG-YP---LLPGEDEGDQLACMI 312
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 157 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 200 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 483 HGHLKSSNVLLDRS--FEPLLTDYALRPLINPDNAHTLMVAYK-SPEYAHNGKI------ 533
HG +K+SN+LL+ + L DY L P+ H YK P+ H+G I
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK---EYKEDPKRCHDGTIEFTSID 231
Query: 534 -------SKKSDVWSLGILILELLTGKYP 555
S++ D+ LG +++ LTG P
Sbjct: 232 AHNGVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 79 KLEQMNLSGTIAAESLGL--LSSLRAVSFMNNKFEGPLPDLRKMGP-LKSIYLSDNGFSG 135
KLE +NLS + E+L L LS+LR + NN + L +GP +++++ ++N
Sbjct: 59 KLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANN---- 109
Query: 136 NISDDAFEGMTSLKKLYMANNRLT 159
NIS + K +Y+ANN++T
Sbjct: 110 NISRVSCSRGQGKKNIYLANNKIT 133
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 207 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 363 LGSGTFGASYKTVIS-NGQAYVVKRYK---QMNNVGREDFQEHIKRLGRLE-HPNLLPLT 417
LG G +G +K++ G+ VK+ Q + + F+E I L L H N++ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFRE-IMILTELSGHENIVNLL 75
Query: 418 AFYYRKEEK--LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNE 475
++ L+++++E L + AN L+ + ++ ++K + YLH+
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHS- 127
Query: 476 LPGSIIPHGHLKSSNVLLDRSFEPLLTDYAL-RPLINP------------------DNAH 516
G ++ H +K SN+LL+ + D+ L R +N D+
Sbjct: 128 --GGLL-HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 517 TLMVAY------KSPEYA-HNGKISKKSDVWSLGILILELLTGK 553
++ Y ++PE + K +K D+WSLG ++ E+L GK
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 522 YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLSNWV 573
Y++PE + D+WSLG ++ ELLTG YP LL G D L+ +
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG-YP---LLPGEDEGDQLACMI 312
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 157 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 209 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 483 HGHLKSSNVLLDRS--FEPLLTDYALRPLINPDNAHTLMVAYK-SPEYAHNGKI------ 533
HG +K+SN+LL+ + L DY L P+ H YK P+ H+G I
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK---EYKEDPKRCHDGTIEFTSID 231
Query: 534 -------SKKSDVWSLGILILELLTGKYP 555
S++ D+ LG +++ LTG P
Sbjct: 232 AHNGVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 123 LKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKF 182
L ++ +S+N I DD F+ TSL+ L +++NRLT L +P L + N
Sbjct: 143 LTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198
Query: 183 QGQVPEIKQNEMRSLGLANNELEGPIPESLS 213
I E+ + + N + GP+ L+
Sbjct: 199 STLAIPIAVEELDASHNSINVVRGPVNVELT 229
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 76 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 127
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 128 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 148 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 157 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 427 LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG-------VVKGMAYLHNELPGS 479
+++ EF + G+L+ L + + P D ++ V KGM +L +
Sbjct: 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK--- 164
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----LMVAYKSPEYAHNGKI 533
H L + N+LL + D+ L I +PD L + + +PE +
Sbjct: 165 -XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 534 SKKSDVWSLGILILELLT 551
+ +SDVWS G+L+ E+ +
Sbjct: 224 TIQSDVWSFGVLLWEIFS 241
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 362 VLGSGTFGASYKTV-ISNGQAYVVKR--------YKQMNNVGR------------EDFQE 400
+LGSG FG+ Y + +S+ +K + ++ N R F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 401 HIKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRL 459
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 71 VIRLLDWFERPDSFVLIL--ERPEPVQDLFDFITERGALQEELARS-------FFWQ--- 118
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTL 518
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 119 -----VLEAVRHCHN----XGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTD 168
Query: 519 M---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 344 RDDMEPFDLQDMLRASAEVLGSGTFGASYKTVIS----NGQAYVVKRYKQMNNVGREDFQ 399
RD M+ D ++ VLG G+FG K ++S + Y VK K+ + +D +
Sbjct: 335 RDRMKLTDFNFLM-----VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVE 386
Query: 400 EHI--KRLGRL--EHPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDW 455
+ KR+ L + P L L + + + + E+V G L H +Q
Sbjct: 387 CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGRFKE 441
Query: 456 QTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
+ + G+ +L ++ II + LK NV+LD + D+ + D
Sbjct: 442 PHAVFYAAEIAIGLFFLQSK---GII-YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497
Query: 516 HTLMVA----YKSPEYAHNGKISKKSDVWSLGILILELLTGKYP 555
T Y +PE K D W+ G+L+ E+L G+ P
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 148 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 97 LSSLRAVSFMNNK--------FEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSL 148
L LR ++F NNK FEG + I L+ N N+ F+G+ SL
Sbjct: 56 LPQLRKINFSNNKITDIEEGAFEGA-------SGVNEILLTSNRLE-NVQHKMFKGLESL 107
Query: 149 KKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVP 187
K L + +NR+T S + L + L L N+ P
Sbjct: 108 KTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 194 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 96 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 147
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 148 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 483 HGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVAYKSPEY------------AHN 530
H +K N+LLDR L D+ + D +VA +P+Y
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 531 GKISKKSDVWSLGILILELLTGKYP 555
G + D W+LG+ E+ G+ P
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALR-----PLINPDNAHTLM 519
+++G+AY H + + H LK N+L++ E L D+ L P DN +
Sbjct: 109 LLRGLAYCHRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN-EVVT 163
Query: 520 VAYKSPE-YAHNGKISKKSDVWSLGILILELLTGK 553
+ Y+ P+ + S + D+W +G + E+ TG+
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 159 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 157 VAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP---DNA 515
+I K ++ G+ Y+H I H +K NVL++ P L + L N D
Sbjct: 135 QISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 516 HTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
+T + Y+SPE +D+WS LI EL+TG +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 79 KLEQMNLSGTIAAESLGL--LSSLRAVSFMNNKFEGPLPDLRKMGP-LKSIYLSDNGFSG 135
KLE +NLS + E+L L LS+LR + NN + L +GP +++++ ++N
Sbjct: 59 KLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANN---- 109
Query: 136 NISDDAFEGMTSLKKLYMANNRLT 159
NIS + K +Y+ANN++T
Sbjct: 110 NISRVSCSRGQGKKNIYLANNKIT 133
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 460 KIIKGVVKGMAYLHNELPGSI-IPHGHLKSSNVLLDRSFEP----LLTDYALRPLINPDN 514
+I K + + + YLH SI I H +K N LL S P LTD+ N
Sbjct: 165 EIXKSIGEAIQYLH-----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHN 218
Query: 515 AHTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQG 562
+ T Y +PE K K D WSLG++ LL G YP Y G
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG-YPPFYSNHG 268
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----L 518
V KGM +L + H L + N+LL + D+ L I +PD L
Sbjct: 157 VAKGMEFLASRK----XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 519 MVAYKSPEYAHNGKISKKSDVWSLGILILELLT 551
+ + +PE + + +SDVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 460 KIIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINP---DNA 515
+I K ++ G+ Y+H I H +K NVL++ P L + L N D
Sbjct: 135 QISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 516 HTLMVA---YKSPEYAHNGKISKKSDVWSLGILILELLTGKY 554
+T + Y+SPE +D+WS LI EL+TG +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 40/220 (18%)
Query: 363 LGSGTFG---ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGR-------LEHPN 412
+GSG G A++ TV+ A V K + N Q H KR R + H N
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVA-VKKLSRPFQN------QTHAKRAYRELVLLKCVNHKN 82
Query: 413 LLPLTAFYYRK---EEKLLLYEFVE--NGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
++ L + + EE +Y +E + +L +H LD + ++ ++
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-------LDHERMSYLLYQMLC 135
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKS 524
G+ +LH+ + I H LK SN+++ + D+ L + + T V Y++
Sbjct: 136 GIKHLHS----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRA 191
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYD 564
PE + D+WS+G ++ EL+ G + + QG D
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKG----SVIFQGTD 227
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 44/163 (26%)
Query: 430 YEFV-ENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHLKS 488
Y+F+ ENG L +L +H + K+ + K + +LH+ + + H LK
Sbjct: 104 YDFIKENGFLPFRL--DHIR-----------KMAYQICKSVNFLHS----NKLTHTDLKP 146
Query: 489 SNVLLDRS-----FEPLLTDYALRPLINPD-------------NAHTLMVA---YKSPEY 527
N+L +S + P + R LINPD H+ +V Y++PE
Sbjct: 147 ENILFVQSDYTEAYNPKIKRDE-RTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEV 205
Query: 528 AHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYDSKASLS 570
S+ DVWS+G +++E G + +DSK L+
Sbjct: 206 ILALGWSQPCDVWSIGCILIEYYLG----FTVFPTHDSKEHLA 244
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 96 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 147
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPD------NAHTLMVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD ++ V Y PE + S
Sbjct: 148 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 427 LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG-------VVKGMAYLHNELPGS 479
+++ EF + G+L+ L + + P D ++ V KGM +L +
Sbjct: 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---- 163
Query: 480 IIPHGHLKSSNVLLDRSFEPLLTDYALRPLI--NPDNAHT----LMVAYKSPEYAHNGKI 533
H L + N+LL + D+ L I +PD L + + +PE +
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 534 SKKSDVWSLGILILELLT 551
+ +SDVWS G+L+ E+ +
Sbjct: 224 TIQSDVWSFGVLLWEIFS 241
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 18/104 (17%)
Query: 116 DLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPK-LME 174
D + + L ++ L +N S IS AF + L++LY++ N+L +P ++PK L E
Sbjct: 71 DFKNLKNLHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPE---KMPKTLQE 125
Query: 175 LRLEANKF------------QGQVPEIKQNEMRSLGLANNELEG 206
LR+ N+ Q V E+ N ++S G+ N +G
Sbjct: 126 LRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 169
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 124 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 175
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 18/104 (17%)
Query: 116 DLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPK-LME 174
D + + L ++ L +N S IS AF + L++LY++ N+L +P ++PK L E
Sbjct: 71 DFKNLKNLHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPE---KMPKTLQE 125
Query: 175 LRLEANKF------------QGQVPEIKQNEMRSLGLANNELEG 206
LR+ N+ Q V E+ N ++S G+ N +G
Sbjct: 126 LRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 169
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 77 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 128
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 129 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 363 LGSGTFGASYKTVISNGQAYVVK--RYKQMNNVGREDFQEHIKRLGRLEHPNLLPLTAFY 420
+GSG ++ + Q Y +K ++ +N + ++ I L +L+ + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 421 YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSI 480
Y ++ + Y +E G++ + K++ +D R K +++ + +H
Sbjct: 124 YEITDQYI-YMVMECGNIDLN---SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---- 175
Query: 481 IPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTL------MVAYKSPEYAHNGKIS 534
I H LK +N L+ L+ D+ + + PD + V Y PE + S
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 535 KKS-----------DVWSLGILILELLTGKYP 555
+++ DVWSLG ++ + GK P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 97 LSSLRAVSFMNNKFEGPLPD--LRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
L+ L +S N+ + LPD K+ L +YL +N ++ + F+ +T LK+L +
Sbjct: 51 LTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALD 108
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEI 189
N+L +L L ++ L N + P I
Sbjct: 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 143
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 95 GLLSSLRAVSFMNNKFEG-PLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYM 153
G+ SS + +NK + P K+ L + LS N ++ D F+ +T L LY+
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYL 83
Query: 154 ANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPE 188
N+L +L +L EL L+ N+ + VP+
Sbjct: 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPD 117
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 348 EPFDLQDMLRASAEVLGSGTFGASYKT-VISNGQAYVVKRYKQMNNV-GREDFQEHIKRL 405
E F Q R S LG G++G +K +G+ Y VKR M+ G +D + +
Sbjct: 52 ESFFQQSFQRLSR--LGHGSYGEVFKVRSKEDGRLYAVKR--SMSPFRGPKDRARKLAEV 107
Query: 406 GRLE----HPNLLPLTAFYYRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLK- 460
G E HP + L + EE +LY E L G H + W L
Sbjct: 108 GSHEKVGQHPCCVRLEQAW---EEGGILYLQTE---LCGPSLQQHCEA-----WGASLPE 156
Query: 461 -----IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNA 515
++ + +A+LH++ + H +K +N+ L L D+ L L+ A
Sbjct: 157 AQVWGYLRDTLLALAHLHSQ----GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTA 210
Query: 516 HTLMVAYKSPEYAH----NGKISKKSDVWSLGILILEL 549
V P Y G +DV+SLG+ ILE+
Sbjct: 211 GAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 123 LKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKF 182
L ++ +S+N I DD F+ TSL+ L +++NRLT L +P L + N
Sbjct: 149 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 204
Query: 183 QGQVPEIKQNEMRSLGLANNELEGPIPESLS 213
I E+ + + N + GP+ L+
Sbjct: 205 STLAIPIAVEELDASHNSINVVRGPVNVELT 235
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 350 FDLQDMLRASAEVLGSGTFGASYKTVIS-NGQAYVVKRYKQMNNVGREDFQEHIKRLGRL 408
+ + D + S +VLG G G + GQ +K + R++ H + G
Sbjct: 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD-SPKARQEVDHHWQASGG- 81
Query: 409 EHPNLLPLTAFY----YRKEEKLLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKG 464
P+++ + Y + K L++ E +E G L ++ + + +I++
Sbjct: 82 --PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRD 136
Query: 465 VVKGMAYLHNELPGSIIPHGHLKSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA 521
+ + +LH+ I H +K N+L ++ LTD+ + T
Sbjct: 137 IGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 522 --YKSPEYAHNGKISKKSDVWSLGILILELLTGKYPENY 558
Y +PE K K D+WSLG+++ LL G +P Y
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFY 230
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA----YKSPEYAHNGKISKKSDVWS 541
LK N+L+D+ +TD+ + T +A Y +PE + +K D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 542 LGILILELLTGKYP 555
LG+LI E+ G YP
Sbjct: 224 LGVLIYEMAAG-YP 236
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 141 AFEGMTSLKKLYMANNRLTGTIPS-SLVQLPKLMELRLEANKFQGQVPEIKQNEMRSL 197
AF G+ +L L + +NRLT TIP+ + V L KL EL L N + +P N + SL
Sbjct: 107 AFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSL 162
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 97 LSSLRAVSF-MNNKFEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMAN 155
LS+LR ++ M N E +P+L + L + LS N S I +F+G+ L+KL+M
Sbjct: 184 LSNLRYLNLAMCNLRE--IPNLTPLIKLDELDLSGNHLSA-IRPGSFQGLMHLQKLWMIQ 240
Query: 156 NRLTGTIPSSLVQLPKLMELRLEANKF 182
+++ ++ L L+E+ L N
Sbjct: 241 SQIQVIERNAFDNLQSLVEINLAHNNL 267
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 363 LGSGTFG---ASYKTVISNGQAYVVKRYKQMNNVGREDFQEHIKRLGR-------LEHPN 412
+GSG G A++ TV+ A V K + N Q H KR R + H N
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVA-VKKLSRPFQN------QTHAKRAYRELVLLKCVNHKN 84
Query: 413 LLPLTAFYYRK---EEKLLLYEFVE--NGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVK 467
++ L + + EE +Y +E + +L +H LD + ++ ++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-------LDHERMSYLLYQMLC 137
Query: 468 GMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA---YKS 524
G+ +LH+ + I H LK SN+++ + D+ L + T V Y++
Sbjct: 138 GIKHLHS----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRA 193
Query: 525 PEYAHNGKISKKSDVWSLGILILELLTGKYPENYLLQGYD 564
PE + D+WS+G ++ EL+ G + QG D
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG----CVIFQGTD 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 427 LLLYEFVENGSLAGKLHANHTKQRPGLDWQTRLKIIKGVVKGMAYLHNELPGSIIPHGHL 486
L++ E +E G L ++ + + +I++ + + +LH+ I H +
Sbjct: 83 LIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSH----NIAHRDV 135
Query: 487 KSSNVLL---DRSFEPLLTDYALRPLINPDNAHTLMVA--YKSPEYAHNGKISKKSDVWS 541
K N+L ++ LTD+ + T Y +PE K K D+WS
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 542 LGILILELLTGKYPENY 558
LG+++ LL G +P Y
Sbjct: 196 LGVIMYILLCG-FPPFY 211
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 402 IKRLGRLEHPNLLPLTAFYYRKEEKLLLYEFV-ENGSLAGKLHANHTKQRPGLDWQTRLK 460
I+ L E P+ L R E L++F+ E G+L +L + WQ
Sbjct: 119 IRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARS-------FFWQ---- 165
Query: 461 IIKGVVKGMAYLHNELPGSIIPHGHLKSSNVLLDRSFEPL-LTDYALRPLINPDNAHTLM 519
V++ + + HN + H +K N+L+D + L L D+ L+ D +T
Sbjct: 166 ----VLEAVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDF 216
Query: 520 ---VAYKSPEYAHNGKISKKSD-VWSLGILILELLTGKYP 555
Y PE+ + +S VWSLGIL+ +++ G P
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 110 FEGPLPDLRKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQL 169
FEG L +M ++SI L + F NIS + F + L++L + L+ +PS LV L
Sbjct: 248 FEG----LCEMS-VESINLQKHYF-FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGL 300
Query: 170 PKLMELRLEANKFQG 184
L +L L ANKF+
Sbjct: 301 STLKKLVLSANKFEN 315
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 137 ISDDAFEGMTSLKKLYMANNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEI 189
I D+AF G+T LK+L + N+L +L L ++ L N + P I
Sbjct: 314 IDDNAFWGLTHLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 366
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV-AYKSPEYAHNGKISKKSDVWSLGI 544
LK N+++D+ +TD+ L + Y +PE + +K D W+LG+
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 545 LILELLTGKYP 555
LI E+ G YP
Sbjct: 227 LIYEMAAG-YP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMVA--YKSPEYAHNGKISKKSDVWSLG 543
LK N+L+D+ +TD+ + TL Y +PE + +K D W+LG
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVK-GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 544 ILILELLTGKYP 555
+LI E+ G YP
Sbjct: 227 VLIYEMAAG-YP 237
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 97 LSSLRAVSFMNNKF-EGPLPDL-RKMGPLKSIYLSDNGFSGNISDDAFEGMTSLKKLYMA 154
LSSL + N F E LPD+ ++ L + LS +S AF ++SL+ L MA
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMA 502
Query: 155 NNRLTGTIPSSLVQLPKLMELRLEANKFQGQVPEI 189
+N+L +L L ++ L N + P I
Sbjct: 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV-AYKSPEYAHNGKISKKSDVWSLGI 544
LK N+L+D+ +TD+ + Y +PE + +K D W+LG+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 545 LILELLTGKYP 555
LI E+ G YP
Sbjct: 248 LIYEMAAG-YP 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV-AYKSPEYAHNGKISKKSDVWSLGI 544
LK N+++D+ +TD+ L + Y +PE + +K D W+LG+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 545 LILELLTGKYP 555
LI E+ G YP
Sbjct: 227 LIYEMAAG-YP 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 486 LKSSNVLLDRSFEPLLTDYALRPLINPDNAHTLMV-AYKSPEYAHNGKISKKSDVWSLGI 544
LK N+L+D+ +TD+ + Y +PE + +K D W+LG+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 545 LILELLTGKYP 555
LI E+ G YP
Sbjct: 248 LIYEMAAG-YP 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,840,626
Number of Sequences: 62578
Number of extensions: 793727
Number of successful extensions: 3472
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 616
Number of HSP's that attempted gapping in prelim test: 2112
Number of HSP's gapped (non-prelim): 1258
length of query: 634
length of database: 14,973,337
effective HSP length: 105
effective length of query: 529
effective length of database: 8,402,647
effective search space: 4445000263
effective search space used: 4445000263
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)