Query 038432
Match_columns 602
No_of_seqs 698 out of 5184
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 11:00:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038432.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038432hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03192 Voltage-dependent pot 100.0 1.8E-94 3.8E-99 803.2 60.2 571 15-602 209-780 (823)
2 KOG0498 K+-channel ERG and rel 100.0 3.2E-57 6.9E-62 471.0 28.3 374 15-394 241-639 (727)
3 KOG0500 Cyclic nucleotide-gate 100.0 9.6E-49 2.1E-53 376.4 31.5 285 15-302 137-433 (536)
4 KOG0499 Cyclic nucleotide-gate 100.0 2.4E-42 5.3E-47 336.9 22.1 293 1-303 332-652 (815)
5 KOG4412 26S proteasome regulat 100.0 6.2E-39 1.3E-43 268.1 13.5 175 327-519 34-212 (226)
6 KOG0501 K+-channel KCNQ [Inorg 100.0 1.2E-38 2.6E-43 310.3 15.8 285 15-303 360-669 (971)
7 KOG4412 26S proteasome regulat 100.0 2.9E-38 6.4E-43 264.1 10.6 187 331-534 3-195 (226)
8 PHA02791 ankyrin-like protein; 100.0 5.2E-37 1.1E-41 295.4 19.0 209 309-538 8-221 (284)
9 PHA02791 ankyrin-like protein; 100.0 4.9E-36 1.1E-40 288.7 17.8 209 302-534 32-243 (284)
10 PHA02875 ankyrin repeat protei 100.0 7.6E-34 1.7E-38 295.7 19.7 220 303-538 5-229 (413)
11 PHA02946 ankyin-like protein; 100.0 6.9E-34 1.5E-38 294.4 18.3 245 313-575 52-311 (446)
12 PHA03100 ankyrin repeat protei 100.0 2.1E-33 4.5E-38 298.8 20.1 216 307-539 80-311 (480)
13 KOG0509 Ankyrin repeat and DHH 100.0 1.5E-33 3.3E-38 281.3 14.6 196 309-521 53-255 (600)
14 PHA02798 ankyrin-like protein; 100.0 1.3E-32 2.7E-37 291.5 20.8 212 310-538 48-318 (489)
15 PHA02875 ankyrin repeat protei 100.0 1.2E-32 2.5E-37 286.8 19.6 190 331-537 2-194 (413)
16 PHA02878 ankyrin repeat protei 100.0 1.1E-32 2.4E-37 291.4 18.5 206 328-535 34-291 (477)
17 KOG0510 Ankyrin repeat protein 100.0 6.1E-33 1.3E-37 281.8 14.8 228 307-534 128-400 (929)
18 PHA02878 ankyrin repeat protei 100.0 2.5E-32 5.4E-37 288.8 20.1 200 304-522 41-311 (477)
19 PHA03095 ankyrin-like protein; 100.0 3E-32 6.6E-37 289.3 20.2 227 312-538 62-317 (471)
20 KOG0509 Ankyrin repeat and DHH 100.0 7.8E-33 1.7E-37 276.3 14.6 186 332-533 45-234 (600)
21 PHA02874 ankyrin repeat protei 100.0 3E-32 6.5E-37 284.8 19.6 187 327-532 120-310 (434)
22 PHA03100 ankyrin repeat protei 100.0 1.7E-32 3.8E-37 291.7 17.4 217 302-535 37-274 (480)
23 PHA02859 ankyrin repeat protei 100.0 7.6E-32 1.6E-36 250.9 19.0 175 329-522 19-203 (209)
24 PHA02874 ankyrin repeat protei 100.0 6.2E-32 1.4E-36 282.5 20.0 217 308-525 9-237 (434)
25 PHA02716 CPXV016; CPX019; EVM0 100.0 4.3E-32 9.4E-37 288.7 18.8 208 310-534 152-426 (764)
26 PHA02989 ankyrin repeat protei 100.0 7.4E-32 1.6E-36 286.0 20.0 209 313-538 50-316 (494)
27 PHA02716 CPXV016; CPX019; EVM0 100.0 1.1E-31 2.3E-36 285.7 17.4 210 314-540 228-569 (764)
28 PHA02946 ankyin-like protein; 100.0 1.5E-31 3.2E-36 277.0 17.2 254 302-575 74-369 (446)
29 PHA02876 ankyrin repeat protei 100.0 4.4E-31 9.5E-36 291.5 21.1 269 304-572 149-453 (682)
30 PHA03095 ankyrin-like protein; 100.0 1.7E-31 3.7E-36 283.6 17.1 249 309-574 23-303 (471)
31 KOG0508 Ankyrin repeat protein 100.0 1.6E-31 3.5E-36 255.3 13.7 189 328-534 39-238 (615)
32 PHA02795 ankyrin-like protein; 100.0 1.6E-30 3.4E-35 259.1 17.4 183 337-538 83-289 (437)
33 PHA02989 ankyrin repeat protei 100.0 2.6E-30 5.7E-35 274.1 15.4 230 311-575 14-303 (494)
34 PHA02876 ankyrin repeat protei 100.0 7.1E-30 1.5E-34 281.9 19.3 204 314-534 254-466 (682)
35 KOG0510 Ankyrin repeat protein 100.0 2E-29 4.3E-34 256.4 13.6 254 304-574 92-390 (929)
36 PHA02798 ankyrin-like protein; 100.0 3.7E-29 8E-34 265.0 16.3 191 329-536 34-283 (489)
37 PHA02917 ankyrin-like protein; 100.0 8.8E-29 1.9E-33 265.8 17.1 187 327-532 28-252 (661)
38 PHA02795 ankyrin-like protein; 100.0 6.6E-28 1.4E-32 240.4 15.9 192 307-511 84-295 (437)
39 PHA02730 ankyrin-like protein; 100.0 1.2E-27 2.6E-32 249.8 16.4 190 326-532 36-258 (672)
40 PHA02730 ankyrin-like protein; 99.9 2.4E-27 5.3E-32 247.6 16.9 212 309-538 211-525 (672)
41 KOG4177 Ankyrin [Cell wall/mem 99.9 8.3E-28 1.8E-32 260.3 13.7 233 304-536 378-631 (1143)
42 PHA02917 ankyrin-like protein; 99.9 5.4E-27 1.2E-31 252.0 18.1 209 308-536 43-301 (661)
43 PHA02859 ankyrin repeat protei 99.9 7.4E-27 1.6E-31 217.4 15.7 168 304-489 25-203 (209)
44 KOG0508 Ankyrin repeat protein 99.9 3.9E-27 8.5E-32 225.4 13.7 155 327-499 80-236 (615)
45 KOG0502 Integral membrane anky 99.9 1E-27 2.2E-32 207.1 8.4 180 327-525 92-273 (296)
46 KOG4177 Ankyrin [Cell wall/mem 99.9 2.7E-28 5.9E-33 264.1 5.6 223 315-537 356-599 (1143)
47 KOG0195 Integrin-linked kinase 99.9 6.6E-27 1.4E-31 210.2 12.8 241 339-596 8-270 (448)
48 PHA02792 ankyrin-like protein; 99.9 1E-26 2.3E-31 240.1 15.1 213 308-520 80-452 (631)
49 PLN03192 Voltage-dependent pot 99.9 8.8E-24 1.9E-28 236.4 30.7 174 344-538 507-682 (823)
50 KOG0502 Integral membrane anky 99.9 7.9E-26 1.7E-30 195.5 10.4 183 314-516 110-296 (296)
51 PHA02792 ankyrin-like protein; 99.9 2E-24 4.3E-29 223.3 21.5 180 326-505 170-480 (631)
52 KOG0505 Myosin phosphatase, re 99.9 4.7E-25 1E-29 215.9 12.0 169 335-520 44-273 (527)
53 PHA02743 Viral ankyrin protein 99.9 2.6E-24 5.6E-29 192.7 13.7 144 353-513 9-163 (166)
54 KOG0514 Ankyrin repeat protein 99.9 3.4E-25 7.3E-30 205.7 8.1 160 357-534 261-430 (452)
55 TIGR00870 trp transient-recept 99.9 2.1E-24 4.5E-29 240.4 14.4 216 307-533 24-279 (743)
56 KOG0514 Ankyrin repeat protein 99.9 3.9E-23 8.5E-28 192.1 11.3 163 321-500 258-429 (452)
57 PHA02741 hypothetical protein; 99.9 1.5E-22 3.2E-27 182.3 13.3 132 357-505 14-159 (169)
58 KOG0507 CASK-interacting adapt 99.9 6.2E-23 1.3E-27 207.9 11.2 201 303-521 52-264 (854)
59 KOG0507 CASK-interacting adapt 99.9 4.5E-23 9.8E-28 208.8 9.5 195 326-538 44-248 (854)
60 PHA02743 Viral ankyrin protein 99.9 3.1E-22 6.8E-27 179.2 13.5 138 327-480 16-163 (166)
61 PHA02884 ankyrin repeat protei 99.9 2.9E-22 6.2E-27 192.8 14.0 151 328-502 29-186 (300)
62 PHA02736 Viral ankyrin protein 99.9 2.1E-22 4.5E-27 178.9 11.9 137 357-505 10-153 (154)
63 PHA02884 ankyrin repeat protei 99.9 5.8E-22 1.3E-26 190.7 14.1 157 357-534 25-185 (300)
64 KOG0512 Fetal globin-inducing 99.9 5.7E-22 1.2E-26 165.2 11.6 138 367-521 66-208 (228)
65 KOG0512 Fetal globin-inducing 99.9 1.9E-21 4E-26 162.2 11.4 141 333-490 65-210 (228)
66 PHA02741 hypothetical protein; 99.9 3.8E-21 8.1E-26 173.2 12.7 130 326-472 16-159 (169)
67 KOG3676 Ca2+-permeable cation 99.8 5.2E-21 1.1E-25 196.9 13.2 192 330-533 100-330 (782)
68 TIGR00870 trp transient-recept 99.8 5E-21 1.1E-25 213.3 12.4 214 302-520 54-299 (743)
69 PHA02736 Viral ankyrin protein 99.8 4.8E-21 1E-25 170.1 9.0 127 407-535 10-150 (154)
70 KOG0505 Myosin phosphatase, re 99.8 6E-21 1.3E-25 187.3 9.0 173 325-498 67-283 (527)
71 KOG0195 Integrin-linked kinase 99.8 4.1E-21 8.8E-26 173.0 6.0 110 412-521 32-143 (448)
72 KOG4369 RTK signaling protein 99.8 4.8E-21 1E-25 199.7 4.7 209 327-535 753-983 (2131)
73 PF12796 Ank_2: Ankyrin repeat 99.8 3.7E-19 8.1E-24 142.1 10.8 89 418-508 1-89 (89)
74 KOG4369 RTK signaling protein 99.8 2.8E-19 6E-24 186.8 7.6 235 311-545 835-1094(2131)
75 cd00204 ANK ankyrin repeats; 99.7 2.4E-17 5.2E-22 141.0 14.0 122 360-498 3-126 (126)
76 PF12796 Ank_2: Ankyrin repeat 99.7 1.1E-17 2.4E-22 133.5 9.8 87 335-442 1-87 (89)
77 KOG4214 Myotrophin and similar 99.7 3.5E-17 7.5E-22 121.8 8.8 104 416-519 4-108 (117)
78 cd00204 ANK ankyrin repeats; 99.7 7.5E-17 1.6E-21 137.9 12.2 120 411-530 4-125 (126)
79 KOG3676 Ca2+-permeable cation 99.7 6.5E-17 1.4E-21 166.9 12.4 175 326-500 138-330 (782)
80 KOG4214 Myotrophin and similar 99.6 5.2E-16 1.1E-20 115.6 7.3 99 333-449 4-104 (117)
81 COG0666 Arp FOG: Ankyrin repea 99.6 6.3E-15 1.4E-19 140.5 12.3 129 356-501 65-203 (235)
82 PF13857 Ank_5: Ankyrin repeat 99.6 1.7E-15 3.7E-20 108.0 4.3 55 464-518 1-56 (56)
83 COG0666 Arp FOG: Ankyrin repea 99.5 2.7E-14 5.9E-19 136.1 11.7 125 327-468 69-203 (235)
84 PRK09392 ftrB transcriptional 99.5 1.9E-13 4E-18 130.8 16.3 130 179-308 6-135 (236)
85 PTZ00322 6-phosphofructo-2-kin 99.5 7.6E-14 1.6E-18 151.9 12.6 104 416-519 84-196 (664)
86 KOG0515 p53-interacting protei 99.5 4.6E-14 9.9E-19 137.8 8.6 117 333-466 552-673 (752)
87 KOG1710 MYND Zn-finger and ank 99.5 1.7E-13 3.6E-18 124.2 10.2 118 332-465 13-132 (396)
88 PF13637 Ank_4: Ankyrin repeat 99.5 1E-13 2.2E-18 98.4 6.1 54 445-498 1-54 (54)
89 PF13857 Ank_5: Ankyrin repeat 99.5 4.4E-14 9.6E-19 100.6 4.2 55 350-421 1-56 (56)
90 PTZ00322 6-phosphofructo-2-kin 99.4 3.1E-13 6.6E-18 147.2 11.4 104 366-486 84-196 (664)
91 PF13637 Ank_4: Ankyrin repeat 99.4 2E-13 4.3E-18 96.9 5.8 54 364-434 1-54 (54)
92 KOG1710 MYND Zn-finger and ank 99.4 8.7E-13 1.9E-17 119.6 10.4 117 364-497 12-131 (396)
93 cd00038 CAP_ED effector domain 99.4 8.1E-12 1.8E-16 104.6 13.5 112 187-298 1-113 (115)
94 KOG0515 p53-interacting protei 99.4 9E-13 2E-17 128.9 8.3 101 418-518 554-657 (752)
95 PRK11753 DNA-binding transcrip 99.4 2.5E-11 5.4E-16 114.0 16.6 119 189-307 6-126 (211)
96 KOG1113 cAMP-dependent protein 99.4 1.6E-12 3.5E-17 122.2 8.1 130 178-311 120-249 (368)
97 smart00100 cNMP Cyclic nucleot 99.3 5.1E-11 1.1E-15 100.5 14.3 115 187-301 1-118 (120)
98 COG2905 Predicted signal-trans 99.3 6E-11 1.3E-15 118.7 16.5 127 179-308 6-132 (610)
99 PF00027 cNMP_binding: Cyclic 99.3 2.1E-11 4.4E-16 97.6 10.9 89 206-294 2-91 (91)
100 KOG0614 cGMP-dependent protein 99.3 7.5E-12 1.6E-16 123.1 7.7 121 175-295 267-390 (732)
101 PRK10402 DNA-binding transcrip 99.3 4.9E-11 1.1E-15 113.0 13.1 111 196-306 24-135 (226)
102 PF07885 Ion_trans_2: Ion chan 99.2 7.4E-11 1.6E-15 91.0 10.3 77 15-110 2-78 (79)
103 KOG0614 cGMP-dependent protein 99.2 1.7E-11 3.7E-16 120.7 7.4 137 173-313 147-283 (732)
104 COG0664 Crp cAMP-binding prote 99.2 2.4E-10 5.1E-15 107.7 15.2 127 183-309 3-130 (214)
105 PRK11161 fumarate/nitrate redu 99.2 3.5E-10 7.6E-15 108.1 15.6 126 182-308 15-142 (235)
106 PLN02868 acyl-CoA thioesterase 99.2 1.7E-10 3.7E-15 119.1 13.7 113 179-293 7-119 (413)
107 KOG3713 Voltage-gated K+ chann 99.2 2.9E-11 6.4E-16 119.5 5.3 78 54-131 375-452 (477)
108 TIGR03697 NtcA_cyano global ni 99.0 4.1E-09 8.9E-14 97.5 12.8 99 211-309 1-102 (193)
109 KOG1419 Voltage-gated K+ chann 99.0 8.4E-10 1.8E-14 109.5 7.8 61 50-110 263-323 (654)
110 PRK09391 fixK transcriptional 99.0 9.4E-09 2E-13 97.6 13.8 109 198-309 33-142 (230)
111 KOG1113 cAMP-dependent protein 99.0 1.3E-09 2.9E-14 102.9 7.7 118 175-295 235-352 (368)
112 KOG0818 GTPase-activating prot 99.0 9.7E-10 2.1E-14 107.2 6.5 88 417-504 136-226 (669)
113 PF13606 Ank_3: Ankyrin repeat 98.9 1.1E-09 2.4E-14 66.1 3.9 30 477-506 1-30 (30)
114 PF00023 Ank: Ankyrin repeat H 98.9 2E-09 4.4E-14 67.2 4.3 33 477-509 1-33 (33)
115 PRK13918 CRP/FNR family transc 98.9 2E-08 4.4E-13 93.5 13.0 98 202-306 5-105 (202)
116 KOG0783 Uncharacterized conser 98.9 7.6E-10 1.6E-14 114.3 3.5 79 443-521 50-129 (1267)
117 KOG0506 Glutaminase (contains 98.9 1E-09 2.2E-14 106.6 3.6 90 445-534 506-596 (622)
118 KOG0506 Glutaminase (contains 98.9 2.5E-09 5.5E-14 103.9 5.9 95 327-438 502-597 (622)
119 KOG0818 GTPase-activating prot 98.9 6.9E-09 1.5E-13 101.4 8.9 87 448-534 136-223 (669)
120 PF13606 Ank_3: Ankyrin repeat 98.9 2.7E-09 5.9E-14 64.4 3.5 30 363-392 1-30 (30)
121 KOG0783 Uncharacterized conser 98.8 4.9E-09 1.1E-13 108.5 4.8 85 405-489 43-130 (1267)
122 PF00023 Ank: Ankyrin repeat H 98.7 1.4E-08 2.9E-13 63.4 3.6 32 363-394 1-32 (33)
123 KOG0782 Predicted diacylglycer 98.7 2.4E-08 5.1E-13 99.1 6.1 115 420-534 872-990 (1004)
124 KOG0782 Predicted diacylglycer 98.7 6.9E-08 1.5E-12 95.9 9.1 89 412-500 897-989 (1004)
125 KOG1545 Voltage-gated shaker-l 98.7 3.1E-10 6.7E-15 106.5 -7.7 89 15-114 363-451 (507)
126 KOG3609 Receptor-activated Ca2 98.6 1.8E-07 3.9E-12 98.5 9.4 130 332-506 26-159 (822)
127 KOG0705 GTPase-activating prot 98.6 1.3E-07 2.8E-12 94.4 7.6 87 418-504 628-720 (749)
128 KOG0522 Ankyrin repeat protein 98.6 6.2E-08 1.3E-12 96.3 5.1 86 448-533 23-110 (560)
129 KOG0522 Ankyrin repeat protein 98.5 1.6E-07 3.5E-12 93.4 7.3 87 333-436 22-110 (560)
130 KOG0521 Putative GTPase activa 98.5 5.3E-08 1.2E-12 105.7 3.1 82 443-524 654-735 (785)
131 KOG0705 GTPase-activating prot 98.5 2.9E-07 6.3E-12 92.0 7.8 90 335-441 628-721 (749)
132 PRK10537 voltage-gated potassi 98.3 2E-06 4.4E-11 87.1 10.0 54 56-109 168-221 (393)
133 KOG0521 Putative GTPase activa 98.3 4.4E-07 9.5E-12 98.7 5.0 89 412-500 654-744 (785)
134 KOG3684 Ca2+-activated K+ chan 98.3 5.1E-06 1.1E-10 81.7 11.4 91 53-151 284-374 (489)
135 PF00520 Ion_trans: Ion transp 98.3 1.5E-06 3.3E-11 80.5 7.5 91 15-105 104-200 (200)
136 KOG2384 Major histocompatibili 98.3 6.2E-07 1.3E-11 77.3 3.8 63 469-531 3-66 (223)
137 KOG2968 Predicted esterase of 98.2 1.4E-06 3E-11 91.8 6.0 114 194-307 499-613 (1158)
138 KOG2384 Major histocompatibili 98.2 3E-06 6.4E-11 73.1 6.5 70 354-440 2-72 (223)
139 KOG0511 Ankyrin repeat protein 98.2 5.4E-06 1.2E-10 79.0 8.7 68 448-515 39-106 (516)
140 KOG1420 Ca2+-activated K+ chan 98.2 5.9E-07 1.3E-11 89.7 1.9 130 53-190 285-418 (1103)
141 KOG0511 Ankyrin repeat protein 98.1 4.5E-06 9.7E-11 79.5 6.3 60 334-393 39-98 (516)
142 KOG0520 Uncharacterized conser 98.1 6.2E-06 1.3E-10 89.2 8.2 126 357-530 567-699 (975)
143 KOG0520 Uncharacterized conser 98.0 6.2E-06 1.3E-10 89.2 5.6 123 327-467 570-702 (975)
144 KOG4390 Voltage-gated A-type K 98.0 4.7E-07 1E-11 86.2 -3.6 60 53-112 353-412 (632)
145 PF01007 IRK: Inward rectifier 97.8 0.00015 3.2E-09 71.7 11.1 93 15-114 43-144 (336)
146 KOG3609 Receptor-activated Ca2 97.8 4.4E-05 9.6E-10 81.0 7.5 134 363-541 24-161 (822)
147 KOG1418 Tandem pore domain K+ 97.6 6.7E-05 1.5E-09 78.8 4.9 58 56-113 115-172 (433)
148 KOG2505 Ankyrin repeat protein 97.5 9.4E-05 2E-09 73.4 4.9 62 458-519 404-471 (591)
149 KOG3827 Inward rectifier K+ ch 97.2 0.0011 2.4E-08 64.3 7.2 101 8-115 64-173 (400)
150 KOG2968 Predicted esterase of 97.2 0.0035 7.6E-08 67.1 11.4 111 198-308 110-228 (1158)
151 smart00248 ANK ankyrin repeats 97.1 0.00089 1.9E-08 39.4 4.0 29 477-505 1-29 (30)
152 KOG4404 Tandem pore domain K+ 97.1 0.0013 2.8E-08 62.3 6.4 58 56-113 186-251 (350)
153 KOG3542 cAMP-regulated guanine 97.0 0.0038 8.3E-08 64.4 9.9 200 175-394 276-480 (1283)
154 smart00248 ANK ankyrin repeats 96.9 0.0012 2.6E-08 38.8 3.6 29 363-391 1-29 (30)
155 PRK11832 putative DNA-binding 96.8 0.019 4.1E-07 52.1 11.7 95 196-293 15-110 (207)
156 PF11834 DUF3354: Domain of un 96.8 0.0015 3.3E-08 47.6 3.3 35 564-602 1-35 (69)
157 KOG4404 Tandem pore domain K+ 96.6 0.00025 5.3E-09 66.9 -2.4 52 56-107 80-131 (350)
158 KOG2505 Ankyrin repeat protein 96.5 0.003 6.4E-08 63.1 4.4 64 342-422 402-471 (591)
159 PF06128 Shigella_OspC: Shigel 96.4 0.019 4.2E-07 51.6 8.7 90 414-503 179-279 (284)
160 PF04831 Popeye: Popeye protei 96.3 0.27 6E-06 41.8 14.5 104 190-297 14-124 (153)
161 PF03158 DUF249: Multigene fam 96.2 0.049 1.1E-06 47.7 9.7 137 332-499 47-191 (192)
162 PF03158 DUF249: Multigene fam 95.4 0.091 2E-06 46.1 8.1 138 365-531 47-190 (192)
163 KOG1418 Tandem pore domain K+ 93.4 0.013 2.9E-07 61.3 -1.6 48 55-102 241-296 (433)
164 PF06128 Shigella_OspC: Shigel 92.3 0.78 1.7E-05 41.6 8.0 44 426-469 229-278 (284)
165 KOG3542 cAMP-regulated guanine 92.2 0.24 5.2E-06 51.7 5.4 89 180-280 37-125 (1283)
166 PF11929 DUF3447: Domain of un 88.5 0.78 1.7E-05 34.6 4.2 46 448-500 9-54 (76)
167 PF00060 Lig_chan: Ligand-gate 88.1 0.59 1.3E-05 40.5 3.8 96 11-112 4-99 (148)
168 KOG3193 K+ channel subunit [In 87.8 0.09 2E-06 53.3 -1.7 42 57-98 218-259 (1087)
169 PF11929 DUF3447: Domain of un 87.3 0.92 2E-05 34.2 3.9 47 366-436 8-54 (76)
170 PLN03223 Polycystin cation cha 81.4 20 0.00043 41.9 12.3 28 85-112 1398-1425(1634)
171 COG4709 Predicted membrane pro 76.2 12 0.00025 33.3 6.9 73 122-196 6-83 (195)
172 KOG4440 NMDA selective glutama 71.4 15 0.00032 38.9 7.4 99 8-110 569-667 (993)
173 PF07883 Cupin_2: Cupin domain 65.2 8.2 0.00018 28.2 3.3 44 206-254 3-47 (71)
174 PF08006 DUF1700: Protein of u 64.3 29 0.00062 31.3 7.3 54 121-176 5-63 (181)
175 PF13314 DUF4083: Domain of un 63.0 38 0.00082 23.6 5.6 47 84-130 6-55 (58)
176 KOG1054 Glutamate-gated AMPA-t 57.6 7.5 0.00016 40.6 2.4 74 56-135 595-668 (897)
177 KOG0513 Ca2+-independent phosp 56.0 3.9 8.5E-05 43.0 0.1 99 412-522 104-204 (503)
178 PF05899 Cupin_3: Protein of u 55.6 22 0.00048 26.5 4.1 30 222-255 26-55 (74)
179 PF10011 DUF2254: Predicted me 54.7 72 0.0016 32.6 9.0 61 53-113 97-157 (371)
180 PF14377 DUF4414: Domain of un 52.9 33 0.00072 27.8 5.1 44 133-176 51-105 (108)
181 PF11151 DUF2929: Protein of u 52.6 12 0.00026 26.3 2.0 18 56-73 2-19 (57)
182 PF07077 DUF1345: Protein of u 49.1 1.7E+02 0.0036 26.4 9.3 50 54-103 130-179 (180)
183 PRK08156 type III secretion sy 48.1 1.4E+02 0.003 30.3 9.5 70 78-147 167-236 (361)
184 PRK09108 type III secretion sy 47.6 1.4E+02 0.003 30.2 9.5 71 77-147 173-243 (353)
185 PRK12721 secretion system appa 47.5 1.4E+02 0.003 30.2 9.5 71 78-148 172-242 (349)
186 TIGR03037 anthran_nbaC 3-hydro 47.0 64 0.0014 28.2 6.1 67 209-282 36-103 (159)
187 TIGR00933 2a38 potassium uptak 46.0 80 0.0017 32.5 7.8 43 55-97 230-274 (390)
188 TIGR01404 FlhB_rel_III type II 44.9 1.6E+02 0.0035 29.6 9.5 71 78-148 171-241 (342)
189 KOG0513 Ca2+-independent phosp 44.7 0.78 1.7E-05 48.1 -7.0 104 349-476 121-224 (503)
190 PRK05702 flhB flagellar biosyn 44.1 1.2E+02 0.0026 30.7 8.5 69 78-146 179-247 (359)
191 PRK13109 flhB flagellar biosyn 43.6 1.8E+02 0.0039 29.4 9.6 70 78-147 181-250 (358)
192 smart00835 Cupin_1 Cupin. This 43.0 75 0.0016 27.3 6.1 54 203-256 32-87 (146)
193 PRK12468 flhB flagellar biosyn 42.5 1.8E+02 0.0039 29.8 9.5 70 78-147 179-248 (386)
194 PRK06771 hypothetical protein; 41.5 1.7E+02 0.0037 22.9 7.2 50 98-147 14-63 (93)
195 TIGR00328 flhB flagellar biosy 41.4 2E+02 0.0043 29.0 9.5 70 78-147 172-241 (347)
196 KOG3836 HLH transcription fact 41.1 7.6 0.00016 41.0 -0.5 63 452-514 403-465 (605)
197 PHA03029 hypothetical protein; 41.0 1.4E+02 0.0031 21.8 6.2 37 80-116 2-38 (92)
198 PRK04190 glucose-6-phosphate i 40.7 1.3E+02 0.0027 27.5 7.3 51 205-255 72-131 (191)
199 KOG1052 Glutamate-gated kainat 39.4 1E+02 0.0022 34.4 8.0 94 10-112 343-436 (656)
200 PRK06298 type III secretion sy 38.4 2.6E+02 0.0055 28.4 9.7 66 82-147 177-242 (356)
201 KOG1053 Glutamate-gated NMDA-t 38.2 3.5E+02 0.0077 30.7 11.0 97 10-111 565-664 (1258)
202 PF13623 SurA_N_2: SurA N-term 37.8 1.5E+02 0.0031 25.6 6.9 44 88-131 10-66 (145)
203 KOG1709 Guanidinoacetate methy 35.2 33 0.00073 31.4 2.6 40 464-503 1-40 (271)
204 TIGR00769 AAA ADP/ATP carrier 34.0 2.3E+02 0.005 30.0 9.0 48 17-92 125-173 (472)
205 COG2981 CysZ Uncharacterized p 33.8 4.1E+02 0.0088 25.0 9.4 66 15-112 33-98 (250)
206 KOG0498 K+-channel ERG and rel 32.4 3.3E+02 0.0071 30.5 10.0 42 163-204 371-417 (727)
207 PF07697 7TMR-HDED: 7TM-HD ext 32.3 3.9E+02 0.0085 24.5 9.7 58 164-222 147-207 (222)
208 PRK13290 ectC L-ectoine syntha 31.5 1.1E+02 0.0024 25.6 5.1 48 205-256 39-87 (125)
209 KOG4591 Uncharacterized conser 31.1 44 0.00095 30.0 2.6 42 479-520 223-269 (280)
210 PF02037 SAP: SAP domain; Int 30.9 72 0.0016 19.7 2.9 26 122-147 5-35 (35)
211 PRK13264 3-hydroxyanthranilate 30.6 1.2E+02 0.0025 27.2 5.1 38 219-257 52-89 (177)
212 KOG3836 HLH transcription fact 30.6 13 0.00027 39.4 -0.9 56 338-393 403-458 (605)
213 COG0662 {ManC} Mannose-6-phosp 30.4 1.3E+02 0.0028 25.1 5.4 48 202-254 37-85 (127)
214 TIGR03404 bicupin_oxalic bicup 29.9 1.4E+02 0.003 30.4 6.4 52 205-256 71-122 (367)
215 PF04053 Coatomer_WDAD: Coatom 29.0 5.3E+02 0.011 27.1 10.6 17 223-239 216-232 (443)
216 COG1917 Uncharacterized conser 28.7 1.3E+02 0.0028 25.2 5.2 49 204-257 46-95 (131)
217 TIGR00934 2a38euk potassium up 28.5 4.1E+02 0.0089 30.0 9.9 92 6-106 449-547 (800)
218 KOG2568 Predicted membrane pro 27.0 5.3E+02 0.011 27.5 9.9 46 59-105 281-326 (518)
219 PRK12772 bifunctional flagella 26.2 4.1E+02 0.0089 29.3 9.6 71 78-148 435-505 (609)
220 COG3837 Uncharacterized conser 25.2 3.4E+02 0.0073 23.7 6.8 37 217-258 60-96 (161)
221 COG4325 Predicted membrane pro 24.8 5.7E+02 0.012 26.0 9.1 62 49-112 125-191 (464)
222 KOG4591 Uncharacterized conser 24.8 51 0.0011 29.6 1.9 43 447-489 224-271 (280)
223 PF14802 TMEM192: TMEM192 fami 24.7 3.7E+02 0.0081 25.4 7.8 87 3-97 17-115 (236)
224 COG3817 Predicted membrane pro 24.1 1.5E+02 0.0032 27.9 4.8 27 54-81 30-56 (313)
225 PRK12773 flhB flagellar biosyn 24.0 4.4E+02 0.0095 28.7 8.8 70 78-147 470-539 (646)
226 TIGR03404 bicupin_oxalic bicup 23.7 2E+02 0.0043 29.3 6.2 53 203-255 247-300 (367)
227 PLN03218 maturation of RBCL 1; 23.3 3.9E+02 0.0084 31.8 9.2 42 336-379 622-667 (1060)
228 smart00511 ORANGE Orange domai 23.3 2.1E+02 0.0046 18.7 4.3 36 117-152 5-41 (45)
229 PLN03081 pentatricopeptide (PP 22.3 9.6E+02 0.021 26.8 12.1 202 282-506 143-360 (697)
230 PF14841 FliG_M: FliG middle d 22.1 1.6E+02 0.0034 22.2 4.0 40 159-206 30-69 (79)
231 COG4291 Predicted membrane pro 22.1 6.1E+02 0.013 23.1 8.7 92 15-108 128-222 (228)
232 TIGR00933 2a38 potassium uptak 21.9 5.8E+02 0.013 26.2 9.4 48 55-102 127-180 (390)
233 COG4792 EscU Type III secretor 21.9 7.6E+02 0.017 24.2 12.4 50 97-146 192-241 (349)
234 PLN03077 Protein ECB2; Provisi 21.3 9E+02 0.02 27.9 11.9 65 433-499 380-448 (857)
235 CHL00038 psbL photosystem II p 21.3 63 0.0014 20.1 1.3 11 59-69 16-26 (38)
236 PF10330 Stb3: Putative Sin3 b 21.3 1.7E+02 0.0038 22.7 3.9 30 176-205 25-54 (92)
237 PF01534 Frizzled: Frizzled/Sm 21.2 3.9E+02 0.0084 26.8 7.6 55 11-71 96-152 (328)
238 PF03891 DUF333: Domain of unk 20.3 2.4E+02 0.0051 19.3 4.1 34 229-262 15-48 (50)
239 PF04053 Coatomer_WDAD: Coatom 20.2 2.6E+02 0.0056 29.4 6.4 74 419-501 355-429 (443)
240 COG5559 Uncharacterized conser 20.1 1.1E+02 0.0024 21.3 2.4 23 131-153 7-29 (65)
No 1
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=100.00 E-value=1.8e-94 Score=803.16 Aligned_cols=571 Identities=75% Similarity=1.173 Sum_probs=527.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFN 94 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g 94 (602)
+++++||+||+||+++..++..+++|+.....++.+.+++.+|++|+||+++|||||||||++|.|..|++|++++|++|
T Consensus 209 ~l~~~H~~aC~~y~i~~~~~~~~~~Wi~~~~~~~~~~s~~~~Yi~slYwai~TmtTVGYGDi~p~t~~E~i~~i~~ml~g 288 (823)
T PLN03192 209 TLFLVHCAGCLYYLIADRYPHQGKTWIGAVIPNFRETSLWIRYISAIYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLFN 288 (823)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCchHHHhhhccccCcHHHHHHHHHHHHHHHHhhccCCCcCCCccchHHHHHHHHHHH
Confidence 67899999999999998777778899987667788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcchhHHHHhhCCHHHHHHHH
Q 038432 95 LGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFKAESLNQHQLIEQLPKSICKSIC 174 (602)
Q Consensus 95 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~~~~~~~~~~l~~lp~~l~~~v~ 174 (602)
+++|+|++|++++++.+.++++.+|+++++.+++||+++++|+.+|+||++|++++|+.+..+++++++.||++||.+++
T Consensus 289 ~~~~a~~ig~i~~li~~~~~~~~~f~~~~~~~~~ym~~~~lp~~lq~ri~~y~~~~~~~~~~~~~~~l~~Lp~~Lr~~i~ 368 (823)
T PLN03192 289 LGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKDQILAYMCLRFKAESLNQQQLIDQLPKSICKSIC 368 (823)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccHHHHHHHcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCee
Q 038432 175 QHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMF 254 (602)
Q Consensus 175 ~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~f 254 (602)
.+++.+.++++++|+++|++++..++..++.+.|+|||.|+.+||.++.+|||.+|.|+++...++++.++..+++|++|
T Consensus 369 ~~l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~F 448 (823)
T PLN03192 369 QHLFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIF 448 (823)
T ss_pred HHHHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEe
Confidence 99999999999999999999999999999999999999999999999999999999999997766788899999999999
Q ss_pred ehhhhhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhhhhcccccccccccCCCCCCCCCchh
Q 038432 255 GEVGALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHKKLKDLNIGDLIAESGEEDGDPNMSVN 334 (602)
Q Consensus 255 Ge~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~ 334 (602)
||.+++.+.|+++++++.+.|+++.+++++|.++++.+|++...++++++++..+.+..+...++.+.+....++++.++
T Consensus 449 GE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~~i~~~~l~~~~~l~~l~v~~ll~~~~~~~~~~~~~~~ 528 (823)
T PLN03192 449 GEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNVVILKNFLQHHKELHDLNVGDLLGDNGGEHDDPNMASN 528 (823)
T ss_pred cchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhHHHHHHHHHHHHHhhhhccccHHHHHhhcccccCCccchhH
Confidence 99999999999999999999999999999999999999999999999999999999998888888888777777788999
Q ss_pred hhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccC
Q 038432 335 LLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNG 414 (602)
Q Consensus 335 L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 414 (602)
||.||..|+.++++.|++.|+|+|..|..|+||||+||..|+.+++++|+++|+|+|.+| .+|
T Consensus 529 L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d-----------------~~G 591 (823)
T PLN03192 529 LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD-----------------ANG 591 (823)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcC-----------------CCC
Confidence 999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CcHHHHHHHcCChhHHHHHHhcCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHH
Q 038432 415 NTALWEAISSKHHSIFRILYHCTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMV 494 (602)
Q Consensus 415 ~tpLh~A~~~~~~~~~~~Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv 494 (602)
+||||+|+..|+.+++++|++.++..+...+.++||.|+..|+.++++.|+++|+|+|.+|.+|+||||+|+..|+.+++
T Consensus 592 ~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv 671 (823)
T PLN03192 592 NTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMV 671 (823)
T ss_pred CCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 99999999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCcccCCCCC-CChhhHHHHHHHHhhhceeeeccCCCchhHHHhhhhhhhhhhhhcCCCCCCcceeEEEecCC
Q 038432 495 NFLVMNGSDVVGANKCE-FSSTNLNDMLQKREIGHRITVHDDNSTQNEVLLKKLEIIDFEAKEGKSKGGNCQRVSIYRGH 573 (602)
Q Consensus 495 ~~Ll~~ga~~~~~d~~g-~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (602)
++|+++|||++..|..| .||++++......+..+.+...+..............................+++++++||
T Consensus 672 ~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (823)
T PLN03192 672 RLLIMNGADVDKANTDDDFSPTELRELLQKRELGHSITIVDSVPADEPDLGRDGGSRPGRLQGTSSDNQCRPRVSIYKGH 751 (823)
T ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHHhhhCceeeeccCCCccccccccccccccccccccccccccCceEEEecCC
Confidence 99999999999999998 99999999988888777665554322222222222122222222334456667889999999
Q ss_pred CcccccccccccCeEEeccccHHHHHhhC
Q 038432 574 PLVRKQACCMEAGRLIKLPNSLEELKKIA 602 (602)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (602)
|+.++.++|.++++++++|.+++|||++|
T Consensus 752 p~~~~~~~~~~~g~~~~~~~~~~e~~~~~ 780 (823)
T PLN03192 752 PLLRNERCCNEAGKLINLPPSLEELKAIA 780 (823)
T ss_pred CcccccccccccCeEEeCCccHHHHHHHH
Confidence 99999999999999999999999999875
No 2
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-57 Score=471.03 Aligned_cols=374 Identities=36% Similarity=0.584 Sum_probs=320.5
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCC-cccccc-----CCC----CCCCchHHHHHHHHHHHHHHHhhcccCccccccch
Q 038432 15 DIILVHCAGCLYYLLADRYP--HKGE-TWLGSV-----NPN----FTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTV 82 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~--~~~~-~w~~~~-----~~~----~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~ 82 (602)
.++++||.||+||+++.... ...+ +|+... ..+ +...+++.+|++|+||+++||||+|||+.+|.+..
T Consensus 241 ~~l~sH~~gc~wYlia~~~~~~~~~~~tw~~~l~~~~~~~~~~~~fg~~s~~~kY~~aLyw~l~tLstvG~g~~~s~~~~ 320 (727)
T KOG0498|consen 241 YLLASHWAGCIWYLIAIERPASCPRKATWLGSLGRLLSCYNLSFTFGIYSLALKYVYALYWGLSTLSTVGYGLVHANNMG 320 (727)
T ss_pred HHHHHHHHHHHHHHHHhcccccCccccccccccccccccCcccccccchhHHHHHHHHHHHHhhHhhhccCCccCCCCcH
Confidence 67889999999999997665 3445 898752 233 66778899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-hcchhHHH
Q 038432 83 EMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFKA-ESLNQHQL 161 (602)
Q Consensus 83 e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~~-~~~~~~~~ 161 (602)
|++|+|++|++|.++||++||+|.+++++.+.+..+|+.++.++++||++++||++||+||++|++|+|.. ++.+++++
T Consensus 321 E~iFsi~~mi~GllL~A~lIGNmt~~iqs~tsR~~~~r~k~rd~e~~m~~~~LP~~LRqRi~~y~q~kw~~t~Gvdee~l 400 (727)
T KOG0498|consen 321 EKIFSIFIMLFGLLLFAYLIGNMTALLQSLTSRTEEMRDKMRDAEQWMSRRQLPPDLRQRIRRYEQYKWLATRGVDEEEL 400 (727)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHHhHHHHhHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhccCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 79999999
Q ss_pred HhhCCHHHHHHHHHHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCc
Q 038432 162 IEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEK 241 (602)
Q Consensus 162 l~~lp~~l~~~v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~ 241 (602)
+++||..||++|+.++|.++++++|+|+++|+.++.+|+..++..+|+|||+|++|||+.++||||.+|.+++...+++.
T Consensus 401 L~~LP~~LR~dI~~hL~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~g~ 480 (727)
T KOG0498|consen 401 LQSLPKDLRRDIKRHLCLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDGGG 480 (727)
T ss_pred HHhCCHHHHHHHHHHHhHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred eeEEEEeCCCCeee-hhhhhcC-CCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHH---HHHhhhhhhccccc
Q 038432 242 EIAVGTLQTGDMFG-EVGALCC-RPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKN---FLQQHKKLKDLNIG 316 (602)
Q Consensus 242 ~~~~~~l~~g~~fG-e~~ll~~-~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~---ll~~~~~~~~~~~~ 316 (602)
+.....|++||+|| |....+. .|.+.||++.+.|+++.|+.+++..+++.++.+...+++. .+...-+.......
T Consensus 481 ~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~~~l~~~~r~~s~~~r~~aa~~i 560 (727)
T KOG0498|consen 481 FFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGSKFLQHTFRYYSHLWRTWAACFI 560 (727)
T ss_pred eEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHHHHHHhHHHHhhhhhhhhhhhhH
Confidence 88999999999999 7777776 7889999999999999999999999999999999998883 33332222211000
Q ss_pred c-----cccccCCCCCCCCCchhh--hHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccC
Q 038432 317 D-----LIAESGEEDGDPNMSVNL--LTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASN 389 (602)
Q Consensus 317 ~-----~l~~~~~~~~~~~g~t~L--~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 389 (602)
+ .....+.. .-+. -.++..++..-....+..+...+..+.+|.+|+|.++..|...+...++.++++
T Consensus 561 q~a~r~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (727)
T KOG0498|consen 561 QAAWRRHIKRKGEE------ELALEEEESAIRGDDRGSKSLLRAGILASRFAANGRPPLHTAASRGSSDCALLLLQKPAD 634 (727)
T ss_pred HHHHHHHHHhhccc------hhhhhcchhhhccccccchhhhhcccccccccccCCCccccccccCccccccccCCCCCC
Confidence 0 00000000 0001 112222222233455667778888899999999999999999999999999999
Q ss_pred CCchh
Q 038432 390 VHLRD 394 (602)
Q Consensus 390 ~~~~~ 394 (602)
++..+
T Consensus 635 p~f~~ 639 (727)
T KOG0498|consen 635 PDFSD 639 (727)
T ss_pred CCccc
Confidence 99886
No 3
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-49 Score=376.41 Aligned_cols=285 Identities=22% Similarity=0.432 Sum_probs=263.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCC-----CchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTE-----TSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIF 89 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~-----~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~ 89 (602)
.++++||.||+||+++...+...++|......+-.- ..+..+|+.|+||+..||||+| -...|.+..|.+|.++
T Consensus 137 ~~ilfHWNaClYf~iS~~~g~~~d~wvY~~i~d~~~~~c~~~n~~ReY~~S~YWStLTlTTiG-e~P~P~t~~ey~F~I~ 215 (536)
T KOG0500|consen 137 CLILFHWNACLYFLISKAIGFTTDDWVYPKINDPEFATCDAGNLTREYLYSLYWSTLTLTTIG-EQPPPVTSSEYAFVIV 215 (536)
T ss_pred HHHHHHHhhHHHHhhhHhcCccccccccCCccCccccccchhHHHHHHHHHHHHHhhhhhhcc-CCCCCCcCchhhHHHH
Confidence 889999999999999998888888899753222222 3378999999999999999999 4578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhc-chhHHHHhhCCHH
Q 038432 90 YMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFKAES-LNQHQLIEQLPKS 168 (602)
Q Consensus 90 ~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~~~~-~~~~~~l~~lp~~ 168 (602)
-.++|+++||.++|++++++.+++....+|+++|+.+++||+.+++|+.++.||.+|+.|.|.+++ .+++++++.||+.
T Consensus 216 d~LiGvliFAtIvG~VGsmVtnmna~r~EFq~~mDGiK~YM~~RkV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~k 295 (536)
T KOG0500|consen 216 DTLIGVLIFATIVGNVGSMVTNMNAARTEFQAKMDGIKQYMRYRKVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDK 295 (536)
T ss_pred HHHHHHHHHhhhhccHhHHHHhhhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999854 6899999999999
Q ss_pred HHHHHHHHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEe
Q 038432 169 ICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTL 248 (602)
Q Consensus 169 l~~~v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l 248 (602)
|+.+++.+++.+.|+++++|+++.+.++.+++..++++.|.|||+|++.||.+.+||+|.+|.+++...++. .+...+
T Consensus 296 L~aeIA~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dDg~--t~~~~L 373 (536)
T KOG0500|consen 296 LKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADDGV--TVFVTL 373 (536)
T ss_pred HHhHhHHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecCCc--EEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999976653 567789
Q ss_pred CCCCeeehhhhhc------CCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHH
Q 038432 249 QTGDMFGEVGALC------CRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKN 302 (602)
Q Consensus 249 ~~g~~fGe~~ll~------~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ 302 (602)
++|++|||++++. |.+|++++++.++++++.++++++.+.+.++|+....+..+
T Consensus 374 ~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L~~k 433 (536)
T KOG0500|consen 374 KAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRLEEK 433 (536)
T ss_pred cCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999998875 45789999999999999999999999999999998777654
No 4
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=336.93 Aligned_cols=293 Identities=18% Similarity=0.351 Sum_probs=271.1
Q ss_pred CcchhhhhhhHHHH------------------------HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHH
Q 038432 1 MIGLANLHQDVRFC------------------------DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIR 56 (602)
Q Consensus 1 ~~~~~~~~~~i~~~------------------------~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 56 (602)
|.|+-|..|+-.|+ +++++|+.||+||+.+.+++.+.+.|+.... ...
T Consensus 332 ~wR~~R~lK~~sF~e~~~~Le~i~s~~y~~RV~rT~~YmlyilHinacvYY~~SayqglG~~rWVydg~--------Gn~ 403 (815)
T KOG0499|consen 332 MWRANRMLKYTSFFEFNHHLESIMSKAYIYRVIRTTGYLLYILHINACVYYWASAYQGLGTTRWVYDGE--------GNE 403 (815)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHhhhHHHHHHHHhhcccccceeEEcCC--------CCc
Confidence 45777777777775 9999999999999999998889999997632 237
Q ss_pred HHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCC
Q 038432 57 YISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLP 136 (602)
Q Consensus 57 Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~ 136 (602)
|++|+|||+-|++|+| |...|++..|.+|..+--++|++.|+.+||.|-.++...+..+..|++.|+..-.||++.+||
T Consensus 404 YiRCyyfa~kt~~tiG-~~P~P~~~~E~Vf~~~~w~mGVFvFslliGQmRDvi~aAt~nq~~fr~~mD~tl~ym~~~~i~ 482 (815)
T KOG0499|consen 404 YIRCYYFAVKTLITIG-GLPEPQTLFEIVFQLLNWFMGVFVFSLLIGQMRDVIGAATANQNYFRACMDDTLAYMNNYSIP 482 (815)
T ss_pred eeeehhhHHHHHHHhc-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhh-cchhHHHHhhCCHHHHHHHHHHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEE
Q 038432 137 PRLKKQILAYMCLRFKAE-SLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVI 215 (602)
Q Consensus 137 ~~l~~ri~~y~~~~~~~~-~~~~~~~l~~lp~~l~~~v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~ 215 (602)
.+++.||+.||+|.|.++ ..|+.++++.||..||.++...++...++++.+|++|+...+..+...++...|.|||.|+
T Consensus 483 kevqnRVr~WyeyTW~sQr~LDEs~ll~~LP~klq~dlAi~V~y~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVC 562 (815)
T KOG0499|consen 483 KEVQNRVRTWYEYTWDSQRMLDESDLLKTLPTKLQLDLAIDVNYSILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVC 562 (815)
T ss_pred HHHHHHHHHHHHhhhhhhccccHHHHHHhcchhheeeeeEEeehhhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceee
Confidence 999999999999999885 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhhhhc---CCCceeEEEEcceeEEEEeeHHHHHHHHHhC
Q 038432 216 MQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVGALC---CRPQIYTYRTKTLSQLLRLKTSALIEAMQSK 292 (602)
Q Consensus 216 ~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~---~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~ 292 (602)
+.|+.+.+||+|..|+|.|....+ ++.++.+|.+|+.|||++++. +.+|+++++|.+++.++++++.++.+++..+
T Consensus 563 kKGeiGkEMYIIk~GqvQVlGGp~-~~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~Y 641 (815)
T KOG0499|consen 563 KKGEIGKEMYIIKHGQVQVLGGPD-GTKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHY 641 (815)
T ss_pred ecccccceeEEeecceEEEecCCC-CCEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhC
Confidence 999999999999999999997554 567899999999999999876 4577899999999999999999999999999
Q ss_pred hHHHHHHHHHH
Q 038432 293 QEDNVSILKNF 303 (602)
Q Consensus 293 ~~~~~~il~~l 303 (602)
|+....+.+..
T Consensus 642 P~sq~iLrkkA 652 (815)
T KOG0499|consen 642 PDSQRILRKKA 652 (815)
T ss_pred ccHHHHHHHHH
Confidence 98765555543
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-39 Score=268.10 Aligned_cols=175 Identities=27% Similarity=0.345 Sum_probs=167.9
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHh-cCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhc-ccCCCchhhHHHHhccch
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLK-ARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKH-ASNVHLRDYIIFMYNLSY 404 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~-~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~ 404 (602)
.+.+|+||||+||..|+.+++.+|++ .+..+|.+|..|+||||.||..|+.++|+-|+.+ |+|+|..+
T Consensus 34 ~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t---------- 103 (226)
T KOG4412|consen 34 DDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT---------- 103 (226)
T ss_pred ccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec----------
Confidence 46689999999999999999999995 6889999999999999999999999999999998 99999998
Q ss_pred hHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHH
Q 038432 405 DIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAI 482 (602)
Q Consensus 405 ~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpL 482 (602)
+.|.||||||+..|+.+++++|+++|+.++. ..|.||||-|+.-|+.+++++|+..|+.+|.+|+.|+|||
T Consensus 104 -------n~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL 176 (226)
T KOG4412|consen 104 -------NGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPL 176 (226)
T ss_pred -------CCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHH
Confidence 9999999999999999999999999998887 8899999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHH
Q 038432 483 EIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLND 519 (602)
Q Consensus 483 h~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~ 519 (602)
|.|...|+.+...+|+++|||++..|+.| ||+..|+
T Consensus 177 ~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 177 HHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred HHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence 99999999999999999999999999999 9988875
No 6
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=310.28 Aligned_cols=285 Identities=22% Similarity=0.368 Sum_probs=254.0
Q ss_pred HHHHHHHHHHHHHHHhhcCC-------CCCCccccccCCCC---------------CCCchHHHHHHHHHHHHHHHhhcc
Q 038432 15 DIILVHCAGCLYYLLADRYP-------HKGETWLGSVNPNF---------------TETSLWIRYISAMYWSITTMTTVG 72 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~-------~~~~~w~~~~~~~~---------------~~~~~~~~Y~~s~ywa~~t~~tvG 72 (602)
..+.+||+||+||.++++.- ..+++|+.....++ ...+.-..|+.|+||+++.|||||
T Consensus 360 y~lvAHWlACiWysIGd~ev~~~~~n~i~~dsWL~kLa~~~~tpY~~~~s~~~~~~gGPSr~S~YissLYfTMt~mttvG 439 (971)
T KOG0501|consen 360 YGLVAHWLACIWYSIGDYEVRDEMDNTIQPDSWLWKLANDIGTPYNYNLSNKGTLVGGPSRTSAYISSLYFTMTCMTTVG 439 (971)
T ss_pred HHHHHHHHHHhheeccchheecccccccccchHHHHHHhhcCCCceeccCCCceeecCCcccceehhhhhhhhhhhhccc
Confidence 45678999999999998532 14568874322111 113345689999999999999999
Q ss_pred cCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHHHHHH
Q 038432 73 YGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK 152 (602)
Q Consensus 73 ygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~ 152 (602)
+|.+.|.|..|++|++.+|++|.++||.++|.+..+++++.+...+|++.+..+.+||+-..+|+.|.+||.+|.-..|.
T Consensus 440 FGNiA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~QQM~s~T~rYHeMlnnVReFlKL~evPK~LsERVMDYvVSTWa 519 (971)
T KOG0501|consen 440 FGNIAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQQMTSNTNRYHEMLNNVREFLKLYEVPKGLSERVMDYVVSTWA 519 (971)
T ss_pred ccccCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred h-hcchhHHHHhhCCHHHHHHHHHHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeE
Q 038432 153 A-ESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGE 231 (602)
Q Consensus 153 ~-~~~~~~~~l~~lp~~l~~~v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~ 231 (602)
. ++++.+.++...|..++.+++-++.++....+|-|+-.|+.+++.|+..++..+..|||.++..|+..+.+.||++|+
T Consensus 520 MtkGiDTeKVL~~CPKDMkADICVHLNRKVFnEHpaFRLASDGCLRaLAm~f~~~H~APGDLlYHtGESvDaLcFvVsGS 599 (971)
T KOG0501|consen 520 MTKGIDTEKVLGYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMEFQTNHCAPGDLLYHTGESVDALCFVVSGS 599 (971)
T ss_pred hhcCcCHHHHhhhCccccccceeeecchhhhccCcceeeccchhHHHHHHHHHhccCCCcceeeecCCccceEEEEEecc
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCceeEEEEeCCCCeeehhhhhcC--CCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHH
Q 038432 232 VEMIDYEMEKEIAVGTLQTGDMFGEVGALCC--RPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNF 303 (602)
Q Consensus 232 v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~~--~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l 303 (602)
+++.+.+ .+++.+++||.||+...=.. ....+.++|.++|++..|.++.+.+++.-+......+-+++
T Consensus 600 LEVIQDD----EVVAILGKGDVFGD~FWK~~t~~qs~ANVRALTYcDLH~IKrd~Ll~VLdFYtAFanSFaRNl 669 (971)
T KOG0501|consen 600 LEVIQDD----EVVAILGKGDVFGDEFWKENTLGQSAANVRALTYCDLHMIKRDKLLKVLDFYTAFANSFARNL 669 (971)
T ss_pred eEEeecC----cEEEEeecCccchhHHhhhhhhhhhhhhhhhhhhhhhhHHhHHHHHHHHHHHHHHHHHhhhce
Confidence 9999744 48999999999998743222 22357899999999999999999999998888877776654
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-38 Score=264.05 Aligned_cols=187 Identities=21% Similarity=0.264 Sum_probs=170.8
Q ss_pred CchhhhHhhhcCcHHHHHHHHhcCC-CCCCCCC-CCchHHHHHHhcCChHHHHHHHh-cccCCCchhhHHHHhccchhHH
Q 038432 331 MSVNLLTVASTGNAAFLDELLKARL-DPDIGDS-KGRTPLHIAASKGHEECVLVLLK-HASNVHLRDYIIFMYNLSYDII 407 (602)
Q Consensus 331 g~t~L~~A~~~g~~~~~~~Ll~~g~-~~n~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~ 407 (602)
+.++.+.+|......-++.+++... .+|.++. +|+|||||||+.|+.++|.+|++ .+..+|.+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkD------------- 69 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKD------------- 69 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCcc-------------
Confidence 3567888888888888899998765 6788866 99999999999999999999995 588888887
Q ss_pred HHhhccCCcHHHHHHHcCChhHHHHHHhc-CCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHH
Q 038432 408 ILLDMNGNTALWEAISSKHHSIFRILYHC-TAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEI 484 (602)
Q Consensus 408 ~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~-g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~ 484 (602)
..||||||+|+..|+.++|+.|+.+ |+|+|. ..|.||||+|+..|+.+++++|+++|+.++.+|..|.||||.
T Consensus 70 ----daGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHR 145 (226)
T KOG4412|consen 70 ----DAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHR 145 (226)
T ss_pred ----ccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHH
Confidence 9999999999999999999999998 999998 889999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 485 AMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 485 A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
|+..|+.+++++|+..||.+|.+|+.|+||||.|...++.+++..|+.++
T Consensus 146 AAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g 195 (226)
T KOG4412|consen 146 AAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAG 195 (226)
T ss_pred HHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhc
Confidence 99999999999999999999999999999999997777766666665555
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=5.2e-37 Score=295.38 Aligned_cols=209 Identities=19% Similarity=0.131 Sum_probs=183.0
Q ss_pred hhhcccccccccccCCCCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhccc
Q 038432 309 KLKDLNIGDLIAESGEEDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHAS 388 (602)
Q Consensus 309 ~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~ 388 (602)
..+..+..++|.+.+++.++.+|.||||+|+..|+.++++.|++.|++++..+ |.||||+|+..|+.++|++|+++|+
T Consensus 8 ~~~~~~~~~~Lis~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Ga 85 (284)
T PHA02791 8 TWKSKQLKSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGM 85 (284)
T ss_pred ccCHHHHHHHHHhCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 34555666677777777788889999999999999999999999999988764 6899999999999999999999999
Q ss_pred CCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCc-chhHHHHHhcCCHHHHHHHH
Q 038432 389 NVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTA-GDLLCTAEKRNDMSVMEELV 465 (602)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g-~t~L~~A~~~~~~~~~~~Ll 465 (602)
+++..| ..|.||||+|+..|+.+++++|+++|++++. ..| .||||+|+..|+.+++++|+
T Consensus 86 dvn~~d-----------------~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL 148 (284)
T PHA02791 86 DDSQFD-----------------DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL 148 (284)
T ss_pred CCCCCC-----------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHH
Confidence 999888 8999999999999999999999999999876 445 48999999999999999999
Q ss_pred HcCCCCCCCC-CCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCCh-hhHHHHHHHHhhhceeeeccCCCc
Q 038432 466 KYGLNVDSKD-RHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSS-TNLNDMLQKREIGHRITVHDDNST 538 (602)
Q Consensus 466 ~~ga~~n~~d-~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~-l~~a~~~~~~~~~~~l~~~~~~~~ 538 (602)
++|++. .| ..|.||||+|+..|+.+++++|+++|||++.+|..|.|| ||+|+..++.++++.|+.++++..
T Consensus 149 ~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in 221 (284)
T PHA02791 149 SEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIY 221 (284)
T ss_pred hcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Confidence 987654 23 358999999999999999999999999999999999987 999999999999999998886554
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.9e-36 Score=288.68 Aligned_cols=209 Identities=16% Similarity=0.145 Sum_probs=187.1
Q ss_pred HHHHhhhhhhcccccccccccCCCCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHH
Q 038432 302 NFLQQHKKLKDLNIGDLIAESGEEDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVL 381 (602)
Q Consensus 302 ~ll~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~ 381 (602)
..+..+...+..++.+.|++.+++....+|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.++++
T Consensus 32 TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk 111 (284)
T PHA02791 32 SALYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVK 111 (284)
T ss_pred cHHHHHHHcCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 45666777788888888888887665556899999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCchhhHHHHhccchhHHHHhhccCC-cHHHHHHHcCChhHHHHHHhcCCCCCC-CCcchhHHHHHhcCCHH
Q 038432 382 VLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGN-TALWEAISSKHHSIFRILYHCTAISDP-YTAGDLLCTAEKRNDMS 459 (602)
Q Consensus 382 ~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-tpLh~A~~~~~~~~~~~Ll~~g~~~~~-~~g~t~L~~A~~~~~~~ 459 (602)
+|+++|++++..+ ..|+ ||||+|+..|+.+++++|++++++... ..|.||||+|+..|+.+
T Consensus 112 ~Ll~~gadin~~~-----------------~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~e 174 (284)
T PHA02791 112 LFVKKNWRLMFYG-----------------KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVD 174 (284)
T ss_pred HHHHCCCCcCccC-----------------CCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHH
Confidence 9999999999887 7774 899999999999999999999876533 46899999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCcCH-HHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 460 VMEELVKYGLNVDSKDRHGRTA-IEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 460 ~~~~Ll~~ga~~n~~d~~g~Tp-Lh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
++++|+++|+++|.+|..|.|| ||+|+..|+.++|++|+++|||++.+|..| |||+.| |++++|+++-
T Consensus 175 iv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l~~~------e~~~~ll~~~ 243 (284)
T PHA02791 175 MMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLLDDA------EIAKMIIEKH 243 (284)
T ss_pred HHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccCCCH------HHHHHHHHhh
Confidence 9999999999999999999987 999999999999999999999999999955 888554 6666666554
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.6e-34 Score=295.68 Aligned_cols=220 Identities=19% Similarity=0.121 Sum_probs=201.4
Q ss_pred HHHhhhhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHH
Q 038432 303 FLQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECV 380 (602)
Q Consensus 303 ll~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v 380 (602)
.+..+...++.+..+.|++.+++. .+.+|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++
T Consensus 5 ~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v 84 (413)
T PHA02875 5 ALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAV 84 (413)
T ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHH
Confidence 455667777888888888887654 566899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCH
Q 038432 381 LVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDM 458 (602)
Q Consensus 381 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~ 458 (602)
++|++.|++.+... +..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..|+.
T Consensus 85 ~~Ll~~~~~~~~~~----------------~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~ 148 (413)
T PHA02875 85 EELLDLGKFADDVF----------------YKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDI 148 (413)
T ss_pred HHHHHcCCcccccc----------------cCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 99999998775432 37899999999999999999999999999987 7899999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCC-ChhhHHHHHHHHhhhceeeeccCCC
Q 038432 459 SVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEF-SSTNLNDMLQKREIGHRITVHDDNS 537 (602)
Q Consensus 459 ~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~-t~l~~a~~~~~~~~~~~l~~~~~~~ 537 (602)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..++.++++.|+.++++.
T Consensus 149 ~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~ 228 (413)
T PHA02875 149 KGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADC 228 (413)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCc
Confidence 999999999999999999999999999999999999999999999999999885 8899999999999999999998765
Q ss_pred c
Q 038432 538 T 538 (602)
Q Consensus 538 ~ 538 (602)
.
T Consensus 229 n 229 (413)
T PHA02875 229 N 229 (413)
T ss_pred c
Confidence 4
No 11
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=6.9e-34 Score=294.37 Aligned_cols=245 Identities=17% Similarity=0.206 Sum_probs=199.9
Q ss_pred ccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC--ChHHHHHHHhccc
Q 038432 313 LNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG--HEECVLVLLKHAS 388 (602)
Q Consensus 313 ~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~ 388 (602)
.+..+.|++.++++ ++.+|.||||+|+..|+.++++.|+++|+++|.+|.+|+||||+|+..+ ..+++++|+++|+
T Consensus 52 ~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Ga 131 (446)
T PHA02946 52 ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131 (446)
T ss_pred HHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 35667777777654 7888999999999999999999999999999999999999999998876 4799999999999
Q ss_pred CCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcC--CHHHHHHH
Q 038432 389 NVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRN--DMSVMEEL 464 (602)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~--~~~~~~~L 464 (602)
+++... |..|.|||| |+..|+.+++++|+++|++++. ..|+||||.|+..+ +.+++++|
T Consensus 132 din~~~----------------d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~L 194 (446)
T PHA02946 132 KINNSV----------------DEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM 194 (446)
T ss_pred Cccccc----------------CCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHH
Confidence 999642 289999998 6677999999999999999987 78999999988755 46899999
Q ss_pred HHcCCCCCCCCCCCcCHHHHHHHcC--cHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHH-HhhhceeeeccCCCchhH
Q 038432 465 VKYGLNVDSKDRHGRTAIEIAMAEN--NVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQK-REIGHRITVHDDNSTQNE 541 (602)
Q Consensus 465 l~~ga~~n~~d~~g~TpLh~A~~~~--~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~-~~~~~~l~~~~~~~~~~~ 541 (602)
+++|+++|.+|.+|+||||+|+..+ +.+++++|++ |+|++.+|..|.||||+|+..++ .++++.|+.++.......
T Consensus 195 l~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~ 273 (446)
T PHA02946 195 MKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQT 273 (446)
T ss_pred HHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcH
Confidence 9999999999999999999999986 8899999995 99999999999999999999877 478888877764332211
Q ss_pred HHhh----hhhhhhhhhhcCCCCCCcceeEEEecCCCc
Q 038432 542 VLLK----KLEIIDFEAKEGKSKGGNCQRVSIYRGHPL 575 (602)
Q Consensus 542 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (602)
.... .-...+.....+...+.++.+.++..||..
T Consensus 274 ~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~e 311 (446)
T PHA02946 274 VNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIR 311 (446)
T ss_pred HHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHH
Confidence 1000 000111222334455678888888888743
No 12
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=298.79 Aligned_cols=216 Identities=20% Similarity=0.245 Sum_probs=198.6
Q ss_pred hhhhhcccccccccccCCCC--CCCCCchhhhHhh--hcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC--ChHHH
Q 038432 307 HKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVA--STGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG--HEECV 380 (602)
Q Consensus 307 ~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~--~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g--~~~~v 380 (602)
+...+..+..+.|.+.+++. .+..|.||||+|+ ..|+.++++.|++.|++++..+..|.||||+|+..| +.+++
T Consensus 80 a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv 159 (480)
T PHA03100 80 YNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKIL 159 (480)
T ss_pred HHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHH
Confidence 45556666777777777654 6677899999999 999999999999999999999999999999999999 99999
Q ss_pred HHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCc------chhHHHH
Q 038432 381 LVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTA------GDLLCTA 452 (602)
Q Consensus 381 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g------~t~L~~A 452 (602)
++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++. ..| .||||.|
T Consensus 160 ~~Ll~~g~din~~d-----------------~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a 222 (480)
T PHA03100 160 KLLIDKGVDINAKN-----------------RYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIA 222 (480)
T ss_pred HHHHHCCCCccccc-----------------CCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHH
Confidence 99999999999887 8999999999999999999999999999987 455 8999999
Q ss_pred HhcCC--HHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhcee
Q 038432 453 EKRND--MSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRI 530 (602)
Q Consensus 453 ~~~~~--~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l 530 (602)
+..|+ .+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|||++.+|..|.||+++|+..++.++++.+
T Consensus 223 ~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~L 302 (480)
T PHA03100 223 ACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLL 302 (480)
T ss_pred HHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCch
Q 038432 531 TVHDDNSTQ 539 (602)
Q Consensus 531 ~~~~~~~~~ 539 (602)
+.++++...
T Consensus 303 l~~g~~i~~ 311 (480)
T PHA03100 303 LNNGPSIKT 311 (480)
T ss_pred HhcCCCHHH
Confidence 999875553
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=281.32 Aligned_cols=196 Identities=25% Similarity=0.263 Sum_probs=178.2
Q ss_pred hhhccccccccccc-C--CCCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCC-CCCchHHHHHHhcCChHHHHHHH
Q 038432 309 KLKDLNIGDLIAES-G--EEDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGD-SKGRTPLHIAASKGHEECVLVLL 384 (602)
Q Consensus 309 ~~~~~~~~~~l~~~-~--~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d-~~g~t~Lh~A~~~g~~~~v~~Ll 384 (602)
+.++.+..+.+.+. + .+..|.+|.|+||+||.+|+++++++|+++|+++|..+ .-|.||||||+++|+..+|++|+
T Consensus 53 q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLl 132 (600)
T KOG0509|consen 53 QYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLL 132 (600)
T ss_pred hcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHH
Confidence 33444444444444 3 23356789999999999999999999999999999997 77899999999999999999999
Q ss_pred hcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHH
Q 038432 385 KHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVME 462 (602)
Q Consensus 385 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~ 462 (602)
++|||++.+| .+|.||||.|++.|+.-++-+|+.+|+|+|. .+|+||||+|+..|....+.
T Consensus 133 qhGAdpt~~D-----------------~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~ 195 (600)
T KOG0509|consen 133 QHGADPTLKD-----------------KQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVR 195 (600)
T ss_pred HcCCCCceec-----------------CCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHH
Confidence 9999999998 9999999999999999999999999999988 89999999999999988899
Q ss_pred HHHHcCCCCCCCC-CCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHH
Q 038432 463 ELVKYGLNVDSKD-RHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDML 521 (602)
Q Consensus 463 ~Ll~~ga~~n~~d-~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~ 521 (602)
.|++.|++++.+| .+|+||||+|+..|+.+++++|++.|++.+.+|.+|.||+++|...
T Consensus 196 ~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 196 RLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999999988 8999999999999999999977788999999999999999999776
No 14
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=291.52 Aligned_cols=212 Identities=21% Similarity=0.213 Sum_probs=190.4
Q ss_pred hhcccccccccccCCCC--CCCCCchhhhHhhhc-----CcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC---ChHH
Q 038432 310 LKDLNIGDLIAESGEED--GDPNMSVNLLTVAST-----GNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG---HEEC 379 (602)
Q Consensus 310 ~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~-----g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g---~~~~ 379 (602)
....++.+.|++.|+++ .+..|.||||.|+.+ +..++++.|+++|+|+|.+|..|+||||+|+..+ +.++
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~i 127 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEI 127 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHH
Confidence 34677888999998766 678899999998864 6789999999999999999999999999999876 7899
Q ss_pred HHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCC---hhHHHHHHhcCCCCCC---CCcchhHHHHH
Q 038432 380 VLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKH---HSIFRILYHCTAISDP---YTAGDLLCTAE 453 (602)
Q Consensus 380 v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~---~~~~~~Ll~~g~~~~~---~~g~t~L~~A~ 453 (602)
+++|+++|+|++..| ..|.||||+|+..|+ .+++++|+++|++++. ..|.||||.++
T Consensus 128 v~~Ll~~Gadvn~~d-----------------~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~ 190 (489)
T PHA02798 128 LLFMIENGADTTLLD-----------------KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYF 190 (489)
T ss_pred HHHHHHcCCCccccC-----------------CCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHH
Confidence 999999999999998 999999999999988 9999999999999986 46789999987
Q ss_pred hc----CCHHHHHHHHHcCCC---------------------------------------CCCCCCCCcCHHHHHHHcCc
Q 038432 454 KR----NDMSVMEELVKYGLN---------------------------------------VDSKDRHGRTAIEIAMAENN 490 (602)
Q Consensus 454 ~~----~~~~~~~~Ll~~ga~---------------------------------------~n~~d~~g~TpLh~A~~~~~ 490 (602)
.. ++.+++++|+++|++ +|.+|..|+||||+|+..|+
T Consensus 191 ~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~ 270 (489)
T PHA02798 191 KYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNN 270 (489)
T ss_pred HhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCc
Confidence 64 478889998887764 45577789999999999999
Q ss_pred HHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccCCCc
Q 038432 491 VEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDDNST 538 (602)
Q Consensus 491 ~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~ 538 (602)
.+++++|+++|||++.+|..|.||||+|+..++.++++.+...+++..
T Consensus 271 ~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 271 RKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred HHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 999999999999999999999999999999999999999988876555
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=286.83 Aligned_cols=190 Identities=15% Similarity=0.180 Sum_probs=181.8
Q ss_pred CchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHh
Q 038432 331 MSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILL 410 (602)
Q Consensus 331 g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (602)
++++||.|+..|+.+++++|++.|+++|..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~---------------- 65 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKY---------------- 65 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccC----------------
Confidence 4789999999999999999999999999999999999999999999999999999999999887
Q ss_pred hccCCcHHHHHHHcCChhHHHHHHhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHH
Q 038432 411 DMNGNTALWEAISSKHHSIFRILYHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMA 487 (602)
Q Consensus 411 ~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~ 487 (602)
..|.||||.|+..|+.++++.|++.|++.+. ..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+.
T Consensus 66 -~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~ 144 (413)
T PHA02875 66 -PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVM 144 (413)
T ss_pred -CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 8899999999999999999999999987654 679999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccCCC
Q 038432 488 ENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDDNS 537 (602)
Q Consensus 488 ~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~ 537 (602)
.|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|+..+++.
T Consensus 145 ~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~ 194 (413)
T PHA02875 145 MGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194 (413)
T ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999998887644
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=291.44 Aligned_cols=206 Identities=17% Similarity=0.227 Sum_probs=171.5
Q ss_pred CCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchh-------------
Q 038432 328 DPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRD------------- 394 (602)
Q Consensus 328 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~------------- 394 (602)
+..+.||||.|+..|+.++++.|++.|+++|.+|..|+||||+||..|+.++++.|++.+.+.+...
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~ 113 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRN 113 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCC
Confidence 4457899999999999999999999999999999999999999999999998888887755443211
Q ss_pred --hHHHHhcc----------------------chhHHH----------Hhhcc-CCcHHHHHHHcCChhHHHHHHhcCCC
Q 038432 395 --YIIFMYNL----------------------SYDIII----------LLDMN-GNTALWEAISSKHHSIFRILYHCTAI 439 (602)
Q Consensus 395 --~~~~~~~~----------------------~~~~~~----------~~~~~-g~tpLh~A~~~~~~~~~~~Ll~~g~~ 439 (602)
....+... ..+++. ..+.. |.||||+|+..|+.+++++|+++|++
T Consensus 114 ~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad 193 (477)
T PHA02878 114 VEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN 193 (477)
T ss_pred HHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC
Confidence 00000000 011222 22455 99999999999999999999999999
Q ss_pred CCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHc-CcHHHHHHHHHCCCCcccCCC-CCCChh
Q 038432 440 SDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAE-NNVEMVNFLVMNGSDVVGANK-CEFSST 515 (602)
Q Consensus 440 ~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~-~~~~iv~~Ll~~ga~~~~~d~-~g~t~l 515 (602)
++. ..|.||||.|+..|+.+++++|+++|+++|.+|..|+||||+|+.. ++.+++++|+++|+|++.++. .|.|||
T Consensus 194 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpL 273 (477)
T PHA02878 194 VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTAL 273 (477)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHH
Confidence 987 7899999999999999999999999999999999999999999976 789999999999999999987 799999
Q ss_pred hHHHHHHHHhhhceeeeccC
Q 038432 516 NLNDMLQKREIGHRITVHDD 535 (602)
Q Consensus 516 ~~a~~~~~~~~~~~l~~~~~ 535 (602)
|+| .++.++++.|+..++
T Consensus 274 h~A--~~~~~~v~~Ll~~ga 291 (477)
T PHA02878 274 HSS--IKSERKLKLLLEYGA 291 (477)
T ss_pred HHH--ccCHHHHHHHHHCCC
Confidence 999 455667777666654
No 17
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=6.1e-33 Score=281.83 Aligned_cols=228 Identities=18% Similarity=0.219 Sum_probs=161.7
Q ss_pred hhhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHH
Q 038432 307 HKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLL 384 (602)
Q Consensus 307 ~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll 384 (602)
+...+..+..+.|.+.+.++ .+.+|.||||.||..++.|..+.|++.|+++...|.+|.+|+|.|+..|..++.+..+
T Consensus 128 A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l 207 (929)
T KOG0510|consen 128 AADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFL 207 (929)
T ss_pred ccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhh
Confidence 33444444445555555433 5556666666666666666556666666666666666666666666666666666655
Q ss_pred h-----cccCCCchh------hHHHHhccch-------------------------hHHHHhhccCCcHHHHHHHcCChh
Q 038432 385 K-----HASNVHLRD------YIIFMYNLSY-------------------------DIIILLDMNGNTALWEAISSKHHS 428 (602)
Q Consensus 385 ~-----~g~~~~~~~------~~~~~~~~~~-------------------------~~~~~~~~~g~tpLh~A~~~~~~~ 428 (602)
. ++..+|.-+ ...+...+++ +.++..|++|.||||+|++.|+.+
T Consensus 208 ~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~ 287 (929)
T KOG0510|consen 208 PEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPE 287 (929)
T ss_pred ccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChh
Confidence 5 333333332 0111111111 222334888999999999999999
Q ss_pred HHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHH-cC-CCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCc
Q 038432 429 IFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVK-YG-LNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDV 504 (602)
Q Consensus 429 ~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~-~g-a~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~ 504 (602)
+++.|+..|++++. .++.||||.||.+|+.++++.|++ .| ...|..|-.|+||||.|+.+||..++++|++.||+.
T Consensus 288 svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 288 SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF 367 (929)
T ss_pred HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh
Confidence 99999999998887 788899999999999999999988 44 567888889999999999999999999999999988
Q ss_pred c---cCCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 505 V---GANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 505 ~---~~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
. ..|.+|+||||+|+..|+...++.++.++
T Consensus 368 ~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~G 400 (929)
T KOG0510|consen 368 LNMSEADSDGNTALHLAAKYGNTSAVQKLISHG 400 (929)
T ss_pred hcccccccCCchhhhHHHHhccHHHHHHHHHcC
Confidence 7 56889999999999998888888887777
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=288.80 Aligned_cols=200 Identities=21% Similarity=0.273 Sum_probs=182.4
Q ss_pred HHhhhhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHH------------------------------------
Q 038432 304 LQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAA------------------------------------ 345 (602)
Q Consensus 304 l~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~------------------------------------ 345 (602)
++.+...++.+.++.|++.+++. .+.+|.||||+||..|+.+
T Consensus 41 Lh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~L 120 (477)
T PHA02878 41 LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKII 120 (477)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHH
Confidence 66678888889999999888654 7788999999999765432
Q ss_pred ----------------------------HHHHHHhcCCCCCCCCCC-CchHHHHHHhcCChHHHHHHHhcccCCCchhhH
Q 038432 346 ----------------------------FLDELLKARLDPDIGDSK-GRTPLHIAASKGHEECVLVLLKHASNVHLRDYI 396 (602)
Q Consensus 346 ----------------------------~~~~Ll~~g~~~n~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 396 (602)
+++.|++.|+++|..|.. |.||||+|+..|+.+++++|+++|++++..|
T Consensus 121 l~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d-- 198 (477)
T PHA02878 121 LTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPD-- 198 (477)
T ss_pred HhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcC--
Confidence 667777889999999988 9999999999999999999999999999998
Q ss_pred HHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhc-CCHHHHHHHHHcCCCCCC
Q 038432 397 IFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKR-NDMSVMEELVKYGLNVDS 473 (602)
Q Consensus 397 ~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~-~~~~~~~~Ll~~ga~~n~ 473 (602)
..|.||||.|+..|+.+++++|+++|++++. ..|.||||+|+.. ++.+++++|+++|+++|.
T Consensus 199 ---------------~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~ 263 (477)
T PHA02878 199 ---------------KTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA 263 (477)
T ss_pred ---------------CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999999999987 7899999999976 789999999999999999
Q ss_pred CCC-CCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 474 KDR-HGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 474 ~d~-~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
++. .|.||||+| .++.+++++|+++|||++.+|..|.||||+|+..+
T Consensus 264 ~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~ 311 (477)
T PHA02878 264 KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQY 311 (477)
T ss_pred cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHc
Confidence 986 899999999 57889999999999999999999999999998743
No 19
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=3e-32 Score=289.29 Aligned_cols=227 Identities=18% Similarity=0.214 Sum_probs=192.4
Q ss_pred cccccccccccCCCC--CCCCCchhhhHhhhcC-cHHHHHHHHhcCCCCCCCCCCCchHHHHHH--hcCChHHHHHHHhc
Q 038432 312 DLNIGDLIAESGEED--GDPNMSVNLLTVASTG-NAAFLDELLKARLDPDIGDSKGRTPLHIAA--SKGHEECVLVLLKH 386 (602)
Q Consensus 312 ~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g-~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~~ 386 (602)
..+..+.|++.+++. ++..|.||||+|+..| ..++++.|++.|+++|.+|..|.||||+|+ ..++.+++++|+++
T Consensus 62 ~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 141 (471)
T PHA03095 62 VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRK 141 (471)
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHc
Confidence 566677777777655 6678999999999999 599999999999999999999999999999 55688999999999
Q ss_pred ccCCCchhh------HHHHhc--cchhHHHH----------hhccCCcHHHHHHHc--CChhHHHHHHhcCCCCCC--CC
Q 038432 387 ASNVHLRDY------IIFMYN--LSYDIIIL----------LDMNGNTALWEAISS--KHHSIFRILYHCTAISDP--YT 444 (602)
Q Consensus 387 g~~~~~~~~------~~~~~~--~~~~~~~~----------~~~~g~tpLh~A~~~--~~~~~~~~Ll~~g~~~~~--~~ 444 (602)
|++++..|. ..+... .+.+++.. .|..|.||||+|+.. ++.++++.|+++|++++. ..
T Consensus 142 gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~ 221 (471)
T PHA03095 142 GADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDML 221 (471)
T ss_pred CCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCC
Confidence 999988661 111111 12333322 267789999998875 678899999999999887 78
Q ss_pred cchhHHHHHhcCCH--HHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 445 AGDLLCTAEKRNDM--SVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 445 g~t~L~~A~~~~~~--~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
|.||||+|+..|+. .+++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|||++.+|.+|.||||+|+..+
T Consensus 222 g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~ 301 (471)
T PHA03095 222 GNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNN 301 (471)
T ss_pred CCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC
Confidence 99999999999875 6888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceeeeccCCCc
Q 038432 523 KREIGHRITVHDDNST 538 (602)
Q Consensus 523 ~~~~~~~l~~~~~~~~ 538 (602)
+.++++.++..+++..
T Consensus 302 ~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 302 NGRAVRAALAKNPSAE 317 (471)
T ss_pred CHHHHHHHHHhCCCHH
Confidence 9999999998876554
No 20
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=7.8e-33 Score=276.26 Aligned_cols=186 Identities=18% Similarity=0.171 Sum_probs=176.2
Q ss_pred chhhhHhhhcCcHHHHHHHHhc-CCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHh
Q 038432 332 SVNLLTVASTGNAAFLDELLKA-RLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILL 410 (602)
Q Consensus 332 ~t~L~~A~~~g~~~~~~~Ll~~-g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (602)
...++.|++.|.++.++.|++. |.++|..|++|.|+|||||.+++.+++++|+++||++|..+
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g---------------- 108 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG---------------- 108 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC----------------
Confidence 3568899999999999999998 99999999999999999999999999999999999999987
Q ss_pred hccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHc
Q 038432 411 DMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAE 488 (602)
Q Consensus 411 ~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 488 (602)
..-|.||||+|+++|+..+|++|+++|||++. .+|.+|||.|+..|+...+-+|+.+|+|+|.+|.+|+||||+|+.+
T Consensus 109 G~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAayk 188 (600)
T KOG0509|consen 109 GVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYK 188 (600)
T ss_pred CCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHh
Confidence 46788999999999999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCcccCC-CCCCChhhHHHHHHHHhhhceeeec
Q 038432 489 NNVEMVNFLVMNGSDVVGAN-KCEFSSTNLNDMLQKREIGHRITVH 533 (602)
Q Consensus 489 ~~~~iv~~Ll~~ga~~~~~d-~~g~t~l~~a~~~~~~~~~~~l~~~ 533 (602)
|+...+..|++.|+++..+| +.|+||||+|+..|+.+++..+.+.
T Consensus 189 g~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g 234 (600)
T KOG0509|consen 189 GFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEG 234 (600)
T ss_pred cccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhc
Confidence 99988999999999999998 8999999999999999998844443
No 21
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3e-32 Score=284.84 Aligned_cols=187 Identities=18% Similarity=0.244 Sum_probs=132.7
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhH
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDI 406 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~ 406 (602)
++..|.||||+|+..|+.+++++|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 120 ~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~------------ 187 (434)
T PHA02874 120 KDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKD------------ 187 (434)
T ss_pred CCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC------------
Confidence 34456666666666666666666666666666666666666666666666666666666666666655
Q ss_pred HHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHH
Q 038432 407 IILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEI 484 (602)
Q Consensus 407 ~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~ 484 (602)
..|.||||+|+..|+.+++++|+++|++++. ..|.||||.|+..+. +++++|+ .|+++|.+|..|+||||+
T Consensus 188 -----~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~ 260 (434)
T PHA02874 188 -----NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHH 260 (434)
T ss_pred -----CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHH
Confidence 6677777777777777777777777776655 567777777776654 3444444 567788888889999999
Q ss_pred HHHcC-cHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH-HHhhhceeee
Q 038432 485 AMAEN-NVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ-KREIGHRITV 532 (602)
Q Consensus 485 A~~~~-~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~-~~~~~~~l~~ 532 (602)
|+..+ +.+++++|+++|+|++.+|..|.||||+|+..+ ..++++.+..
T Consensus 261 A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~ 310 (434)
T PHA02874 261 AINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIA 310 (434)
T ss_pred HHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHH
Confidence 98865 789999999999999999999999999998776 3444444443
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=291.72 Aligned_cols=217 Identities=19% Similarity=0.236 Sum_probs=203.7
Q ss_pred HHHHhhhhhhcccccccccccCCCC--CCCCCchhhhH-----hhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHH--
Q 038432 302 NFLQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLT-----VASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAA-- 372 (602)
Q Consensus 302 ~ll~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~-----A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~-- 372 (602)
..+..+...+..+..+.|++.+++. .+..+.||||. |+..|+.++++.|++.|++++..|..|.||||+|+
T Consensus 37 t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~ 116 (480)
T PHA03100 37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISK 116 (480)
T ss_pred hhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhc
Confidence 4566677788888889999888655 56778999999 99999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcC--ChhHHHHHHhcCCCCCC--CCcchh
Q 038432 373 SKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSK--HHSIFRILYHCTAISDP--YTAGDL 448 (602)
Q Consensus 373 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~--~~~~~~~Ll~~g~~~~~--~~g~t~ 448 (602)
..|+.+++++|+++|++++..+ ..|.||||+|+..| +.+++++|+++|++++. ..|.||
T Consensus 117 ~~~~~~iv~~Ll~~g~~~~~~~-----------------~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tp 179 (480)
T PHA03100 117 KSNSYSIVEYLLDNGANVNIKN-----------------SDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTP 179 (480)
T ss_pred ccChHHHHHHHHHcCCCCCccC-----------------CCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCH
Confidence 9999999999999999999988 99999999999999 99999999999999987 689999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCC------cCHHHHHHHcCc--HHHHHHHHHCCCCcccCCCCCCChhhHHHH
Q 038432 449 LCTAEKRNDMSVMEELVKYGLNVDSKDRHG------RTAIEIAMAENN--VEMVNFLVMNGSDVVGANKCEFSSTNLNDM 520 (602)
Q Consensus 449 L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g------~TpLh~A~~~~~--~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~ 520 (602)
||+|+..|+.+++++|+++|++++..+..| .||||.|+..|+ .+++++|+++|++++.+|..|.||||+|+.
T Consensus 180 L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~ 259 (480)
T PHA03100 180 LHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVY 259 (480)
T ss_pred HHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999 999999999999 999999999999999999999999999999
Q ss_pred HHHHhhhceeeeccC
Q 038432 521 LQKREIGHRITVHDD 535 (602)
Q Consensus 521 ~~~~~~~~~l~~~~~ 535 (602)
.++.++++.|+..++
T Consensus 260 ~~~~~iv~~Ll~~ga 274 (480)
T PHA03100 260 NNNPEFVKYLLDLGA 274 (480)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999998888774
No 23
>PHA02859 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.6e-32 Score=250.89 Aligned_cols=175 Identities=17% Similarity=0.198 Sum_probs=158.3
Q ss_pred CCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC--ChHHHHHHHhcccCCCchhhHHHHhccchhH
Q 038432 329 PNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG--HEECVLVLLKHASNVHLRDYIIFMYNLSYDI 406 (602)
Q Consensus 329 ~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~ 406 (602)
..+.||||.|+..|+.+.++.|++. +|..|..|.||||+|+..+ +.+++++|+++|+++|..+
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~------------ 83 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT------------ 83 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC------------
Confidence 4568999999999999999999975 5678899999999999854 8999999999999999886
Q ss_pred HHHhhccCCcHHHHHHHc---CChhHHHHHHhcCCCCCC--CCcchhHHHHHh--cCCHHHHHHHHHcCCCCCCCCCCCc
Q 038432 407 IILLDMNGNTALWEAISS---KHHSIFRILYHCTAISDP--YTAGDLLCTAEK--RNDMSVMEELVKYGLNVDSKDRHGR 479 (602)
Q Consensus 407 ~~~~~~~g~tpLh~A~~~---~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~--~~~~~~~~~Ll~~ga~~n~~d~~g~ 479 (602)
+..|.||||+|+.. ++.+++++|+++|++++. ..|.||||.|+. .++.+++++|+++|+++|.+|.+|.
T Consensus 84 ----~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~ 159 (209)
T PHA02859 84 ----RDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNN 159 (209)
T ss_pred ----CCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCC
Confidence 24799999998764 479999999999999998 789999999876 4689999999999999999999999
Q ss_pred CHHHH-HHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 480 TAIEI-AMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 480 TpLh~-A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
||||. |+..++.+++++|+++|+|++.+|..|.||+|+|...+
T Consensus 160 t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 160 NILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred cHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 99996 56788999999999999999999999999999997653
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.2e-32 Score=282.46 Aligned_cols=217 Identities=16% Similarity=0.185 Sum_probs=181.6
Q ss_pred hhhhcccccccccccC---CCCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHH
Q 038432 308 KKLKDLNIGDLIAESG---EEDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLL 384 (602)
Q Consensus 308 ~~~~~~~~~~~l~~~~---~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll 384 (602)
...++.+..+.+.+.. .+..+.+|.||||.|+..|+.+++++|++.|+++|..+..|.||||.|+..|+.+++++|+
T Consensus 9 i~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll 88 (434)
T PHA02874 9 IYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLI 88 (434)
T ss_pred HhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3344444444444322 2335667899999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCchh-------hHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhc
Q 038432 385 KHASNVHLRD-------YIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKR 455 (602)
Q Consensus 385 ~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~ 455 (602)
++|++++... ....+..... -++..+..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..
T Consensus 89 ~~g~~~~~~~~~~~~~~~i~~ll~~g~-d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~ 167 (434)
T PHA02874 89 DNGVDTSILPIPCIEKDMIKTILDCGI-DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKH 167 (434)
T ss_pred HCCCCCCcchhccCCHHHHHHHHHCcC-CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHC
Confidence 9998875432 0111111111 1223467899999999999999999999999999987 7899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHh
Q 038432 456 NDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKRE 525 (602)
Q Consensus 456 ~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~ 525 (602)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+...
T Consensus 168 ~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~ 237 (434)
T PHA02874 168 NFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSA 237 (434)
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998766543
No 25
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.98 E-value=4.3e-32 Score=288.68 Aligned_cols=208 Identities=13% Similarity=0.143 Sum_probs=179.9
Q ss_pred hhcccccccccccC-CCC--C-CCCCchhhhHhhh--cCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC--hHHHH
Q 038432 310 LKDLNIGDLIAESG-EED--G-DPNMSVNLLTVAS--TGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGH--EECVL 381 (602)
Q Consensus 310 ~~~~~~~~~l~~~~-~~~--~-~~~g~t~L~~A~~--~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~--~~~v~ 381 (602)
....++.+.|++.+ ++. + +..|.||||.|+. .++.+++++|++.|+++|.+|..|.||||+|+..|+ .++|+
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 45667778888887 554 4 6789999999865 467899999999999999999999999999999995 48999
Q ss_pred HHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHH-------------------------------------HHc
Q 038432 382 VLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEA-------------------------------------ISS 424 (602)
Q Consensus 382 ~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A-------------------------------------~~~ 424 (602)
+|+++|||+|.+| ..|.||||+| +..
T Consensus 232 lLLe~GADVN~kD-----------------~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~ 294 (764)
T PHA02716 232 KIIELGGDMDMKC-----------------VNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARN 294 (764)
T ss_pred HHHHcCCCCCCCC-----------------CCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHc
Confidence 9999999999998 8888888865 455
Q ss_pred CChhHHHHHHhcCCCCCC--CCcchhHHHHHh--cCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHH-------------
Q 038432 425 KHHSIFRILYHCTAISDP--YTAGDLLCTAEK--RNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMA------------- 487 (602)
Q Consensus 425 ~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~--~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~------------- 487 (602)
|+.+++++|+++|++++. ..|+||||+|+. .++.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 295 g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~ 374 (764)
T PHA02716 295 IDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETD 374 (764)
T ss_pred CCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhcccccccc
Confidence 788999999999999987 789999998764 568999999999999999999999999999875
Q ss_pred -cCcHHHHHHHHHCCCCcccCCCCCCChhhHH-H---HHHHHhhhceeeecc
Q 038432 488 -ENNVEMVNFLVMNGSDVVGANKCEFSSTNLN-D---MLQKREIGHRITVHD 534 (602)
Q Consensus 488 -~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a-~---~~~~~~~~~~l~~~~ 534 (602)
.++.+++++|+++|||++.+|..|.||||.+ + ..+..++++.|+..+
T Consensus 375 ~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~ 426 (764)
T PHA02716 375 NDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK 426 (764)
T ss_pred ccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence 3689999999999999999999999999942 2 234577888877654
No 26
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.98 E-value=7.4e-32 Score=285.98 Aligned_cols=209 Identities=18% Similarity=0.221 Sum_probs=136.5
Q ss_pred ccccccccccCCCCC-CCCCchhhhHhhhcC------cHHHHHHHHhcCCCCCCCCCCCchHHHHHHhc---CChHHHHH
Q 038432 313 LNIGDLIAESGEEDG-DPNMSVNLLTVASTG------NAAFLDELLKARLDPDIGDSKGRTPLHIAASK---GHEECVLV 382 (602)
Q Consensus 313 ~~~~~~l~~~~~~~~-~~~g~t~L~~A~~~g------~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~---g~~~~v~~ 382 (602)
.+++++|++.|+++. ...+.||||.|+..+ ..++++.|+++|+|+|.+|..|.||||.|+.. |+.+++++
T Consensus 50 ~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~ 129 (494)
T PHA02989 50 IKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRF 129 (494)
T ss_pred hHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHH
Confidence 345555555555441 123456666554432 34556666666666666666666666655433 45566666
Q ss_pred HHhcccCC-CchhhHHHHhccchhHHHHhhccCCcHHHHHHHc--CChhHHHHHHhcCCCCCC---CCcchhHHHHHhcC
Q 038432 383 LLKHASNV-HLRDYIIFMYNLSYDIIILLDMNGNTALWEAISS--KHHSIFRILYHCTAISDP---YTAGDLLCTAEKRN 456 (602)
Q Consensus 383 Ll~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~--~~~~~~~~Ll~~g~~~~~---~~g~t~L~~A~~~~ 456 (602)
|+++|+|+ +..| ..|.||||+|+.. ++.+++++|+++|++++. ..|.||||.|+..+
T Consensus 130 Ll~~Gadin~~~d-----------------~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~ 192 (494)
T PHA02989 130 LLSKGINVNDVKN-----------------SRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRND 192 (494)
T ss_pred HHHCCCCcccccC-----------------CCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcc
Confidence 66666666 4444 5555555555432 345555555555555543 24555555554432
Q ss_pred ----CHHHHHHHHHcC--------------------------------------CCCCCCCCCCcCHHHHHHHcCcHHHH
Q 038432 457 ----DMSVMEELVKYG--------------------------------------LNVDSKDRHGRTAIEIAMAENNVEMV 494 (602)
Q Consensus 457 ----~~~~~~~Ll~~g--------------------------------------a~~n~~d~~g~TpLh~A~~~~~~~iv 494 (602)
+.+++++|+++| +++|.+|..|+||||+|+..|+.+++
T Consensus 193 ~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v 272 (494)
T PHA02989 193 IDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAF 272 (494)
T ss_pred cccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHH
Confidence 455555555554 45566677899999999999999999
Q ss_pred HHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccCCCc
Q 038432 495 NFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDDNST 538 (602)
Q Consensus 495 ~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~ 538 (602)
++|+++|||++.+|..|.||||+|+..++.++++.++...+...
T Consensus 273 ~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~~ 316 (494)
T PHA02989 273 NYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKY 316 (494)
T ss_pred HHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCChH
Confidence 99999999999999999999999999999999999988775444
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=1.1e-31 Score=285.65 Aligned_cols=210 Identities=17% Similarity=0.119 Sum_probs=174.9
Q ss_pred cccccccccCCCC--CCCCCchhhhHh-------------------------------------hhcCcHHHHHHHHhcC
Q 038432 314 NIGDLIAESGEED--GDPNMSVNLLTV-------------------------------------ASTGNAAFLDELLKAR 354 (602)
Q Consensus 314 ~~~~~l~~~~~~~--~~~~g~t~L~~A-------------------------------------~~~g~~~~~~~Ll~~g 354 (602)
++++.|++.++++ ++..|.||||.| +..|+.++++.|++.|
T Consensus 228 eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G 307 (764)
T PHA02716 228 SVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG 307 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence 4566677777654 667788888864 4457888999999999
Q ss_pred CCCCCCCCCCchHHHHHHh--cCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHH---------
Q 038432 355 LDPDIGDSKGRTPLHIAAS--KGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAIS--------- 423 (602)
Q Consensus 355 ~~~n~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~--------- 423 (602)
+++|.+|..|+||||+|+. .++.+++++|+++|++++.+| ..|+||||+|+.
T Consensus 308 AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD-----------------~~G~TPLH~A~~~lav~~~ld 370 (764)
T PHA02716 308 VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPD-----------------NIGNTVLHTYLSMLSVVNILD 370 (764)
T ss_pred CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCC-----------------CCCCCHHHHHHHhhhhhcccc
Confidence 9999999999999998764 457899999999999999887 999999999875
Q ss_pred -----cCChhHHHHHHhcCCCCCC--CCcchhHHH----HHhcCCHHHHHHHHHcCC-----------------------
Q 038432 424 -----SKHHSIFRILYHCTAISDP--YTAGDLLCT----AEKRNDMSVMEELVKYGL----------------------- 469 (602)
Q Consensus 424 -----~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~----A~~~~~~~~~~~Ll~~ga----------------------- 469 (602)
.++.+++++|+++|++++. ..|.||||. |...++.+++++|++.|+
T Consensus 371 ~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~l 450 (764)
T PHA02716 371 PETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCII 450 (764)
T ss_pred ccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhH
Confidence 3789999999999999988 789999994 233567888888877542
Q ss_pred --------------------------------------CCCCCCCCCcCHHHHHHHcCcH-----HHHHHHHHCCCCccc
Q 038432 470 --------------------------------------NVDSKDRHGRTAIEIAMAENNV-----EMVNFLVMNGSDVVG 506 (602)
Q Consensus 470 --------------------------------------~~n~~d~~g~TpLh~A~~~~~~-----~iv~~Ll~~ga~~~~ 506 (602)
++|..|..|+||||+|+..|+. +++++|+++|||++.
T Consensus 451 hh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~ 530 (764)
T PHA02716 451 HHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINI 530 (764)
T ss_pred HHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcc
Confidence 3456688999999999999886 455999999999999
Q ss_pred CCCCCCChhhHHHHHHHH-----hhhceeeeccCCCchh
Q 038432 507 ANKCEFSSTNLNDMLQKR-----EIGHRITVHDDNSTQN 540 (602)
Q Consensus 507 ~d~~g~t~l~~a~~~~~~-----~~~~~l~~~~~~~~~~ 540 (602)
+|++|+||||+|+..++. ++++.++..+++....
T Consensus 531 ~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~ 569 (764)
T PHA02716 531 PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV 569 (764)
T ss_pred cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH
Confidence 999999999999999865 8999999888766544
No 28
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.5e-31 Score=277.03 Aligned_cols=254 Identities=12% Similarity=0.180 Sum_probs=203.8
Q ss_pred HHHHhhhhhhcccccccccccCCCC--CCCCCchhhhHhhhcC--cHHHHHHHHhcCCCCCC-CCCCCchHHHHHHhcCC
Q 038432 302 NFLQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTG--NAAFLDELLKARLDPDI-GDSKGRTPLHIAASKGH 376 (602)
Q Consensus 302 ~ll~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g--~~~~~~~Ll~~g~~~n~-~d~~g~t~Lh~A~~~g~ 376 (602)
+.++.+...++.++.++|++.++++ ++.+|.||||+|+..+ ..++++.|++.|+++|. .|..|.|||| ||..|+
T Consensus 74 TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~ 152 (446)
T PHA02946 74 YPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPS 152 (446)
T ss_pred CHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCC
Confidence 3455566677778888888888655 7889999999998765 47999999999999995 6899999998 667799
Q ss_pred hHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcC--ChhHHHHHHhcCCCCCC--CCcchhHHHH
Q 038432 377 EECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSK--HHSIFRILYHCTAISDP--YTAGDLLCTA 452 (602)
Q Consensus 377 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~--~~~~~~~Ll~~g~~~~~--~~g~t~L~~A 452 (602)
.+++++|+++|++++..| ..|.||||+|+..+ +.+++++|+++|++++. ..|.||||+|
T Consensus 153 ~~vv~~Ll~~gad~~~~d-----------------~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~A 215 (446)
T PHA02946 153 ERVFKKIMSIGFEARIVD-----------------KFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIV 215 (446)
T ss_pred hHHHHHHHhccccccccC-----------------CCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 999999999999999998 99999999998765 46899999999999987 7899999999
Q ss_pred HhcC--CHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCc-HHHHHHHHHCCCCcc--------------------cC-C
Q 038432 453 EKRN--DMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENN-VEMVNFLVMNGSDVV--------------------GA-N 508 (602)
Q Consensus 453 ~~~~--~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~-~~iv~~Ll~~ga~~~--------------------~~-d 508 (602)
+..| +.+++++|++ |+++|.+|..|.||||+|+..++ .+++++|+++|++++ .. +
T Consensus 216 a~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~ 294 (446)
T PHA02946 216 CSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGK 294 (446)
T ss_pred HHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCc
Confidence 9886 7899999985 89999999999999999999988 489999999987642 12 2
Q ss_pred CCCCChhhHHHHHHHHhhhceeeeccCCCchh---------HHHhhhhhhhhhhhhcCCCCCCcceeEEEecCCCc
Q 038432 509 KCEFSSTNLNDMLQKREIGHRITVHDDNSTQN---------EVLLKKLEIIDFEAKEGKSKGGNCQRVSIYRGHPL 575 (602)
Q Consensus 509 ~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (602)
..|.||||+|+..++.++++.|+.++...... ...++.+-..++.... ...|.++.+.++..+++.
T Consensus 295 ~~~~TpLh~Aa~~g~~eivk~Ll~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~-~~~G~t~l~~a~~~~~~~ 369 (446)
T PHA02946 295 QYDSTDFKMAVEVGSIRCVKYLLDNDIICEDAMYYAVLSEYETMVDYLLFNHFSVDS-VVNGHTCMSECVRLNNPV 369 (446)
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCCccccHHHHHHHhCHHHHHHHHHHCCCCCCC-ccccccHHHHHHHcCCHH
Confidence 35789999999999999999999887543221 1112222222222222 246777777777777654
No 29
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=4.4e-31 Score=291.46 Aligned_cols=269 Identities=17% Similarity=0.165 Sum_probs=217.9
Q ss_pred HHhhhhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHH
Q 038432 304 LQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVL 381 (602)
Q Consensus 304 l~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~ 381 (602)
+..+...+...+.++|++.++++ ++..|.||||+||..|+.+++++|++.|++++..+..|.||||+|+..|+.++++
T Consensus 149 l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk 228 (682)
T PHA02876 149 IKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIK 228 (682)
T ss_pred HHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHH
Confidence 44445667777888888888765 7788999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCchh--hHHHHhccchhHHH----------HhhccCCcHHHHHHHcCCh-hHHHHHHhcCCCCCC--CCcc
Q 038432 382 VLLKHASNVHLRD--YIIFMYNLSYDIII----------LLDMNGNTALWEAISSKHH-SIFRILYHCTAISDP--YTAG 446 (602)
Q Consensus 382 ~Ll~~g~~~~~~~--~~~~~~~~~~~~~~----------~~~~~g~tpLh~A~~~~~~-~~~~~Ll~~g~~~~~--~~g~ 446 (602)
+|++.+++++..+ ...+....+.+... ..|..|.||||+|+..|+. +++++|++.|++++. ..|.
T Consensus 229 ~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~ 308 (682)
T PHA02876 229 AIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGE 308 (682)
T ss_pred HHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCC
Confidence 9999888876654 23334444444432 2356799999999999886 589999999999887 7899
Q ss_pred hhHHHHHhcC-CHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHc-CcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHH
Q 038432 447 DLLCTAEKRN-DMSVMEELVKYGLNVDSKDRHGRTAIEIAMAE-NNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKR 524 (602)
Q Consensus 447 t~L~~A~~~~-~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~-~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~ 524 (602)
||||+|+..| +.++++.|+..|+++|.+|..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 309 TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~ 388 (682)
T PHA02876 309 TPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNV 388 (682)
T ss_pred CHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCH
Confidence 9999999998 58999999999999999999999999999985 578899999999999999999999999999999999
Q ss_pred hhhceeeeccCCCch-----------------hHHHhhhhhhhhhhhhcCCCCCCcceeEEEecC
Q 038432 525 EIGHRITVHDDNSTQ-----------------NEVLLKKLEIIDFEAKEGKSKGGNCQRVSIYRG 572 (602)
Q Consensus 525 ~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (602)
++++.|+..+++... ....++.+...++........|.++.+.++..|
T Consensus 389 ~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 389 VIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred HHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 999998887654431 112233344444444555667777877777655
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.7e-31 Score=283.55 Aligned_cols=249 Identities=17% Similarity=0.225 Sum_probs=165.0
Q ss_pred hhhcccccccccccCCCC--CCCCCchhhhHhhhcC---cHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC-ChHHHHH
Q 038432 309 KLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTG---NAAFLDELLKARLDPDIGDSKGRTPLHIAASKG-HEECVLV 382 (602)
Q Consensus 309 ~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g---~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g-~~~~v~~ 382 (602)
.....+..+.|++.+++. ++..|.||||.|+..+ +.++++.|++.|+++|.+|..|.||||+|+..| +.+++++
T Consensus 23 ~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~l 102 (471)
T PHA03095 23 SNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKL 102 (471)
T ss_pred CCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHH
Confidence 444556667777777654 6778999999999998 999999999999999999999999999999999 5999999
Q ss_pred HHhcccCCCchhh------HHHH--hccchhHHHH----------hhccCCcHHHHHHHcC--ChhHHHHHHhcCCCCCC
Q 038432 383 LLKHASNVHLRDY------IIFM--YNLSYDIIIL----------LDMNGNTALWEAISSK--HHSIFRILYHCTAISDP 442 (602)
Q Consensus 383 Ll~~g~~~~~~~~------~~~~--~~~~~~~~~~----------~~~~g~tpLh~A~~~~--~~~~~~~Ll~~g~~~~~ 442 (602)
|+++|++++..+. ..+. ...+.+++.. .|..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 103 Ll~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~ 182 (471)
T PHA03095 103 LIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA 182 (471)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc
Confidence 9999999999881 1111 1112222221 2444555555555443 34555555555555444
Q ss_pred --CCcchhHHHHHhc--CCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH--HHHHHHHHCCCCcccCCCCCCChhh
Q 038432 443 --YTAGDLLCTAEKR--NDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV--EMVNFLVMNGSDVVGANKCEFSSTN 516 (602)
Q Consensus 443 --~~g~t~L~~A~~~--~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~--~iv~~Ll~~ga~~~~~d~~g~t~l~ 516 (602)
..|.||||.|+.. ++.++++.|+++|++++.+|..|+||||+|+..|+. .+++.|++.|++++.+|..|.||||
T Consensus 183 ~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh 262 (471)
T PHA03095 183 VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLH 262 (471)
T ss_pred cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4455555555543 445566666666666666666666666666666543 4566666666666666666666666
Q ss_pred HHHHHHHHhhhceeeeccCCCchhHHHhhhhhhhhhhhhcCCCCCCcceeEEEecCCC
Q 038432 517 LNDMLQKREIGHRITVHDDNSTQNEVLLKKLEIIDFEAKEGKSKGGNCQRVSIYRGHP 574 (602)
Q Consensus 517 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (602)
+|+..++.++++.|+..+ + ........|.++.+.++..||.
T Consensus 263 ~A~~~~~~~~v~~LL~~g-------------a----d~n~~~~~g~tpl~~A~~~~~~ 303 (471)
T PHA03095 263 YAAVFNNPRACRRLIALG-------------A----DINAVSSDGNTPLSLMVRNNNG 303 (471)
T ss_pred HHHHcCCHHHHHHHHHcC-------------C----CCcccCCCCCCHHHHHHHhCCH
Confidence 666666666655555444 2 2233344666777777777765
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=1.6e-31 Score=255.34 Aligned_cols=189 Identities=24% Similarity=0.334 Sum_probs=176.2
Q ss_pred CCCCchhhhHhhhcCcHHHHHHHHh-cCCCCCCC--------CCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHH
Q 038432 328 DPNMSVNLLTVASTGNAAFLDELLK-ARLDPDIG--------DSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIF 398 (602)
Q Consensus 328 ~~~g~t~L~~A~~~g~~~~~~~Ll~-~g~~~n~~--------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 398 (602)
..+|.|||.+||++|+.+++++|++ .++++... ..+|-+||..|+..||.++||.|+++|+++|...
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT---- 114 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTT---- 114 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccc----
Confidence 4677899999999999999999998 57776543 4578899999999999999999999999999887
Q ss_pred HhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Q 038432 399 MYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDR 476 (602)
Q Consensus 399 ~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~ 476 (602)
..+.|||--||..|+.+++++|+++|+|++. ..|.|.||+||..|+.+++++|++.|||+|.++.
T Consensus 115 -------------~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~ 181 (615)
T KOG0508|consen 115 -------------RTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSY 181 (615)
T ss_pred -------------ccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcc
Confidence 7788999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred CCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 477 HGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 477 ~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
.|+|+||.|++.|+.+++++|+++|+.++ +|..|.|||-.|+..|+.+++..|....
T Consensus 182 kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~~ 238 (615)
T KOG0508|consen 182 KGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQCE 238 (615)
T ss_pred cCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcCC
Confidence 99999999999999999999999999997 5677999999999999999999998643
No 32
>PHA02795 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=259.14 Aligned_cols=183 Identities=13% Similarity=0.125 Sum_probs=168.0
Q ss_pred HhhhcCcHHHHHHHHhcCCCCC------CCCCCCchHHHHHHh--cCChHHHHHHHhcccCCCchhhHHHHhccchhHHH
Q 038432 337 TVASTGNAAFLDELLKARLDPD------IGDSKGRTPLHIAAS--KGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIII 408 (602)
Q Consensus 337 ~A~~~g~~~~~~~Ll~~g~~~n------~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 408 (602)
+|+..+..++++.|+++|+++| ..+..++|+||+|+. .|+.++|++|+++|||++..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~-------------- 148 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE-------------- 148 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--------------
Confidence 8999999999999999999999 778889999999999 899999999999999999754
Q ss_pred HhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--------CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 038432 409 LLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--------YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRT 480 (602)
Q Consensus 409 ~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--------~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~T 480 (602)
+.||||.|+..|+.+++++|+++|++.+. ..+.||+|.|+..++.+++++|+++|||+|.+|..|.|
T Consensus 149 -----~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~T 223 (437)
T PHA02795 149 -----CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRT 223 (437)
T ss_pred -----CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCC
Confidence 58999999999999999999999985433 13678999999999999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH--------HHhhhceeeeccCCCc
Q 038432 481 AIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ--------KREIGHRITVHDDNST 538 (602)
Q Consensus 481 pLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~--------~~~~~~~l~~~~~~~~ 538 (602)
|||+|+..|+.+++++|+++|||++.+|..|.||||+|+..| +.++++.|+.++++..
T Consensus 224 pLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 224 LLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999999999988 4688888887765444
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.6e-30 Score=274.15 Aligned_cols=230 Identities=17% Similarity=0.205 Sum_probs=185.6
Q ss_pred hcccccccccccCCCCC-CCCCchhhhHhhhc--CcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC------ChHHHH
Q 038432 311 KDLNIGDLIAESGEEDG-DPNMSVNLLTVAST--GNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG------HEECVL 381 (602)
Q Consensus 311 ~~~~~~~~l~~~~~~~~-~~~g~t~L~~A~~~--g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g------~~~~v~ 381 (602)
...+..+.|++.|+++. ..+|.||||.++.. ++.++++.|+++|+|+|.++ .+.||||.|+..+ +.++|+
T Consensus 14 ~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~ 92 (494)
T PHA02989 14 VDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVK 92 (494)
T ss_pred CcHHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHH
Confidence 44556667777777662 24688998765543 47899999999999999987 6799999998754 578999
Q ss_pred HHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHc---CChhHHHHHHhcCCCC-CC--CCcchhHHHHHhc
Q 038432 382 VLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISS---KHHSIFRILYHCTAIS-DP--YTAGDLLCTAEKR 455 (602)
Q Consensus 382 ~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~---~~~~~~~~Ll~~g~~~-~~--~~g~t~L~~A~~~ 455 (602)
+|+++|+|+|.+| ..|.||||.|+.. |+.+++++|+++|+|+ +. ..|.||||+|+..
T Consensus 93 ~Ll~~Gadin~~d-----------------~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~ 155 (494)
T PHA02989 93 LLLKFGADINLKT-----------------FNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLES 155 (494)
T ss_pred HHHHCCCCCCCCC-----------------CCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHh
Confidence 9999999999998 9999999998765 6899999999999999 44 7899999998764
Q ss_pred --CCHHHHHHHHHcCCCCCC-CCCCCcCHHHHHHHcC----cHHHHHHHHHCCCCcccC---------------------
Q 038432 456 --NDMSVMEELVKYGLNVDS-KDRHGRTAIEIAMAEN----NVEMVNFLVMNGSDVVGA--------------------- 507 (602)
Q Consensus 456 --~~~~~~~~Ll~~ga~~n~-~d~~g~TpLh~A~~~~----~~~iv~~Ll~~ga~~~~~--------------------- 507 (602)
++.+++++|+++|+|++. .|..|.||||+|+..+ +.+++++|+++|++++.+
T Consensus 156 ~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~ 235 (494)
T PHA02989 156 FSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKK 235 (494)
T ss_pred ccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhccc
Confidence 689999999999999998 6889999999998764 899999999999887654
Q ss_pred -----------------CCCCCChhhHHHHHHHHhhhceeeeccCCCchhHHHhhhhhhhhhhhhcCCCCCCcceeEEEe
Q 038432 508 -----------------NKCEFSSTNLNDMLQKREIGHRITVHDDNSTQNEVLLKKLEIIDFEAKEGKSKGGNCQRVSIY 570 (602)
Q Consensus 508 -----------------d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (602)
|..|+||||+|+..++.++++.|+..++ +.+. ....|.++.+.++.
T Consensus 236 ~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga-------------din~----~d~~G~TpL~~A~~ 298 (494)
T PHA02989 236 EFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGD-------------DIYN----VSKDGDTVLTYAIK 298 (494)
T ss_pred chHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCC-------------Cccc----cCCCCCCHHHHHHH
Confidence 4558888888888888887777776663 2222 23356666666666
Q ss_pred cCCCc
Q 038432 571 RGHPL 575 (602)
Q Consensus 571 ~~~~~ 575 (602)
.|+..
T Consensus 299 ~~~~~ 303 (494)
T PHA02989 299 HGNID 303 (494)
T ss_pred cCCHH
Confidence 66643
No 34
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.1e-30 Score=281.88 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=105.4
Q ss_pred cccccccccCCCC--CCCCCchhhhHhhhcCcH-HHHHHHHhcCCCCCCCCCCCchHHHHHHhcC-ChHHHHHHHhcccC
Q 038432 314 NIGDLIAESGEED--GDPNMSVNLLTVASTGNA-AFLDELLKARLDPDIGDSKGRTPLHIAASKG-HEECVLVLLKHASN 389 (602)
Q Consensus 314 ~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~-~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g-~~~~v~~Ll~~g~~ 389 (602)
+..+.+.+.+.+. .+..|.||||+|+..|+. ++++.|++.|+++|.+|..|.||||+|+..| +.+++++|+..|++
T Consensus 254 ~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad 333 (682)
T PHA02876 254 ETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD 333 (682)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC
Confidence 3333444444322 444566777777766664 4666666666666666666777777776666 46666666666666
Q ss_pred CCchhhHHHHhccchhHHHHhhccCCcHHHHHHHc-CChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHH
Q 038432 390 VHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISS-KHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVK 466 (602)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~-~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~ 466 (602)
++..| ..|.||||+|+.. ++.+++++|++.|++++. ..|.||||+|+..|+.+++++|++
T Consensus 334 in~~d-----------------~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~ 396 (682)
T PHA02876 334 VNAAD-----------------RLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLD 396 (682)
T ss_pred CCCcc-----------------cCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 66665 4444444444442 234444444444444443 344444444444444444444444
Q ss_pred cCCCCCCCCCCCcCHHHHHHHcCc-HHHHHHHHHCCCCcccCCCCCCChhhHHHHHH-HHhhhceeeecc
Q 038432 467 YGLNVDSKDRHGRTAIEIAMAENN-VEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ-KREIGHRITVHD 534 (602)
Q Consensus 467 ~ga~~n~~d~~g~TpLh~A~~~~~-~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~-~~~~~~~l~~~~ 534 (602)
+|++++..+..|.||||+|+..++ ..++++|+++|+|++.+|.+|+||||+|+..+ +.++++.|+..+
T Consensus 397 ~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~G 466 (682)
T PHA02876 397 YGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNG 466 (682)
T ss_pred CCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCC
Confidence 444444444444444444443333 23344444444444444444444444444433 234444444433
No 35
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=2e-29 Score=256.39 Aligned_cols=254 Identities=21% Similarity=0.248 Sum_probs=173.8
Q ss_pred HHhhhhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHH
Q 038432 304 LQQHKKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVL 381 (602)
Q Consensus 304 l~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~ 381 (602)
+..+...+..+..+.+.+.+++. .+.++.+|+|+|+..|+.++++.|+++|+|+|..|..|.||||+||..++.|..+
T Consensus 92 l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k 171 (929)
T KOG0510|consen 92 LHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKK 171 (929)
T ss_pred hHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHH
Confidence 44566667777888888888765 7778899999999999999999999999999999999999999999999999889
Q ss_pred HHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHh-----cCCCCCC--CCcchhHHHHHh
Q 038432 382 VLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYH-----CTAISDP--YTAGDLLCTAEK 454 (602)
Q Consensus 382 ~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~-----~g~~~~~--~~g~t~L~~A~~ 454 (602)
.|++.|+++...| .+|++|+|.|+..|..++.++.+. ++..+|. ..+.||||.|+.
T Consensus 172 ~Li~~~a~~~K~~-----------------~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve 234 (929)
T KOG0510|consen 172 ELINKGADPCKSD-----------------IDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVE 234 (929)
T ss_pred HHHhcCCCCCccc-----------------CcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhh
Confidence 9999999998887 666666666666666666666665 3333433 555666666666
Q ss_pred cCCHHHHHHHHHcCCC---------------CCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHH
Q 038432 455 RNDMSVMEELVKYGLN---------------VDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLND 519 (602)
Q Consensus 455 ~~~~~~~~~Ll~~ga~---------------~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~ 519 (602)
.|+.++++.+++.|+. +|..|++|.||||+||+.|+.+.++.|+..||+++.+++++.||||.|+
T Consensus 235 ~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA 314 (929)
T KOG0510|consen 235 GGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAA 314 (929)
T ss_pred cCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHH
Confidence 6666666666655432 2344566666666666666666666666666666666666666666666
Q ss_pred HHHHHhhhceeee-ccCC-----------------CchhHHHhhhhhhhhhhhh---cCCCCCCcceeEEEecCCC
Q 038432 520 MLQKREIGHRITV-HDDN-----------------STQNEVLLKKLEIIDFEAK---EGKSKGGNCQRVSIYRGHP 574 (602)
Q Consensus 520 ~~~~~~~~~~l~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 574 (602)
..|+...++.|+. ++.+ .++.....+-|-+.++... ...+.|.++.+.++.-|++
T Consensus 315 ~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 315 IYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNT 390 (929)
T ss_pred HcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccH
Confidence 6666655555544 1110 0111111111112111111 3367788888888888887
No 36
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=3.7e-29 Score=265.04 Aligned_cols=191 Identities=13% Similarity=0.176 Sum_probs=167.8
Q ss_pred CCCchhhhHhh--hcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhc-----CChHHHHHHHhcccCCCchhhHHHHhc
Q 038432 329 PNMSVNLLTVA--STGNAAFLDELLKARLDPDIGDSKGRTPLHIAASK-----GHEECVLVLLKHASNVHLRDYIIFMYN 401 (602)
Q Consensus 329 ~~g~t~L~~A~--~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 401 (602)
..+.|+++.+. ..++.++++.|+++|+|+|..|..|.||||.|+.. ++.+++++|+++|+|+|.+|
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d------- 106 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKN------- 106 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCC-------
Confidence 44567666443 35589999999999999999999999999999864 67899999999999999998
Q ss_pred cchhHHHHhhccCCcHHHHHHHcC---ChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCC---HHHHHHHHHcCCCCCC
Q 038432 402 LSYDIIILLDMNGNTALWEAISSK---HHSIFRILYHCTAISDP--YTAGDLLCTAEKRND---MSVMEELVKYGLNVDS 473 (602)
Q Consensus 402 ~~~~~~~~~~~~g~tpLh~A~~~~---~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~---~~~~~~Ll~~ga~~n~ 473 (602)
..|.||||+|+.++ +.+++++|+++|++++. ..|.||||+|+..++ .+++++|+++|+|+|.
T Consensus 107 ----------~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~ 176 (489)
T PHA02798 107 ----------SDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT 176 (489)
T ss_pred ----------CCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc
Confidence 99999999999986 78999999999999988 789999999999998 9999999999999998
Q ss_pred CC-CCCcCHHHHHHHc----CcHHHHHHHHHCCCCc---------------------------------------ccCCC
Q 038432 474 KD-RHGRTAIEIAMAE----NNVEMVNFLVMNGSDV---------------------------------------VGANK 509 (602)
Q Consensus 474 ~d-~~g~TpLh~A~~~----~~~~iv~~Ll~~ga~~---------------------------------------~~~d~ 509 (602)
++ ..|.||||.++.. ++.+++++|+++|+++ |.+|.
T Consensus 177 ~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~ 256 (489)
T PHA02798 177 HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDE 256 (489)
T ss_pred ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCc
Confidence 85 5799999999764 4789999999888654 45677
Q ss_pred CCCChhhHHHHHHHHhhhceeeeccCC
Q 038432 510 CEFSSTNLNDMLQKREIGHRITVHDDN 536 (602)
Q Consensus 510 ~g~t~l~~a~~~~~~~~~~~l~~~~~~ 536 (602)
.|+||||+|+..++.++++.|+..+++
T Consensus 257 ~G~TPL~~A~~~~~~~~v~~LL~~GAd 283 (489)
T PHA02798 257 LGFNPLYYSVSHNNRKIFEYLLQLGGD 283 (489)
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 899999999999999999998887754
No 37
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=8.8e-29 Score=265.81 Aligned_cols=187 Identities=13% Similarity=0.105 Sum_probs=157.2
Q ss_pred CCCCCchhhhHhhhc---CcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChH----HHHHHHhcccCCCchhhHHHH
Q 038432 327 GDPNMSVNLLTVAST---GNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEE----CVLVLLKHASNVHLRDYIIFM 399 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~---g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~----~v~~Ll~~g~~~~~~~~~~~~ 399 (602)
++.+|.||||+|+.. |+.+++++|++.|++++..|..|+||||+|+..|+.+ +++.|++.+...|..+
T Consensus 28 ~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~----- 102 (661)
T PHA02917 28 RNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND----- 102 (661)
T ss_pred cCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC-----
Confidence 578899999997554 8899999999999999999999999999999999854 5678888755455433
Q ss_pred hccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHH--HhcCCHHHHHHHHHcCCCCCCCC
Q 038432 400 YNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTA--EKRNDMSVMEELVKYGLNVDSKD 475 (602)
Q Consensus 400 ~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A--~~~~~~~~~~~Ll~~ga~~n~~d 475 (602)
..+++|.|+.+|+.+++++|+++|++++. ..|+||||.| +..|+.+++++|+++|+++|.+|
T Consensus 103 --------------~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d 168 (661)
T PHA02917 103 --------------FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED 168 (661)
T ss_pred --------------cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence 23677888899999999999999999987 6899999854 45789999999999999998665
Q ss_pred C---CC-----------cCHHHHHHH-----------cCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHH--hhhc
Q 038432 476 R---HG-----------RTAIEIAMA-----------ENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKR--EIGH 528 (602)
Q Consensus 476 ~---~g-----------~TpLh~A~~-----------~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~--~~~~ 528 (602)
. .| .||||+|+. .++.+++++|+++|||++.+|.+|.||||+|+..++. ++++
T Consensus 169 ~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk 248 (661)
T PHA02917 169 EDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVK 248 (661)
T ss_pred cccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHH
Confidence 3 34 599999986 4588999999999999999999999999999998875 6888
Q ss_pred eeee
Q 038432 529 RITV 532 (602)
Q Consensus 529 ~l~~ 532 (602)
.|..
T Consensus 249 ~Li~ 252 (661)
T PHA02917 249 LLMK 252 (661)
T ss_pred HHHh
Confidence 8754
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=6.6e-28 Score=240.42 Aligned_cols=192 Identities=11% Similarity=0.034 Sum_probs=164.4
Q ss_pred hhhhhcccccccccccCCC--------CCCCCCchhhhHhhh--cCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC
Q 038432 307 HKKLKDLNIGDLIAESGEE--------DGDPNMSVNLLTVAS--TGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGH 376 (602)
Q Consensus 307 ~~~~~~~~~~~~l~~~~~~--------~~~~~g~t~L~~A~~--~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~ 376 (602)
+...+..+..+++...+++ .++..++|+||.|+. .|+.+++++|+++|+|++.. ++.||||.|+..|+
T Consensus 84 ~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~ 161 (437)
T PHA02795 84 FAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKE 161 (437)
T ss_pred HhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCc
Confidence 3444556677777777766 356778999999999 89999999999999999985 45899999999999
Q ss_pred hHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHh
Q 038432 377 EECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEK 454 (602)
Q Consensus 377 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~ 454 (602)
.+++++|+++|++.+... . ....+..|.||+|.|...++.+++++|+++|+++|. ..|.||||+|+.
T Consensus 162 ~eIVk~Lls~Ga~~~n~~--------~---~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~ 230 (437)
T PHA02795 162 SSVVEFILNCGIPDENDV--------K---LDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIY 230 (437)
T ss_pred HHHHHHHHhcCCcccccc--------c---chhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHH
Confidence 999999999998543221 0 011123578999999999999999999999999998 789999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCc--------HHHHHHHHHCCCCcccCCCCC
Q 038432 455 RNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENN--------VEMVNFLVMNGSDVVGANKCE 511 (602)
Q Consensus 455 ~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~--------~~iv~~Ll~~ga~~~~~d~~g 511 (602)
.|+.+++++|+++|+++|.+|..|.||||+|+..|+ .+++++|+++|++++..+..+
T Consensus 231 ~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~~ 295 (437)
T PHA02795 231 AGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKLAI 295 (437)
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhHHh
Confidence 999999999999999999999999999999999984 699999999999998765443
No 39
>PHA02730 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.2e-27 Score=249.84 Aligned_cols=190 Identities=14% Similarity=0.085 Sum_probs=163.5
Q ss_pred CCCCCCchhhhHhhhcC---cHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC--ChHHHHHHHhcccCC--CchhhHHH
Q 038432 326 DGDPNMSVNLLTVASTG---NAAFLDELLKARLDPDIGDSKGRTPLHIAASKG--HEECVLVLLKHASNV--HLRDYIIF 398 (602)
Q Consensus 326 ~~~~~g~t~L~~A~~~g---~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~~~--~~~~~~~~ 398 (602)
.++.+|.||||+|+..| +.+++++|+++|+|++.+|..|+||||+|+..+ +.++|++|+++|++. +..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~---- 111 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS---- 111 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc----
Confidence 45778999999999987 599999999999999999999999999999976 799999999996654 6665
Q ss_pred HhccchhHHHHhhccCCcHHHHHHH--cCChhHHHHHHh-cCCCCCCC-------CcchhHHHHHhcCCHHHHHHHHHcC
Q 038432 399 MYNLSYDIIILLDMNGNTALWEAIS--SKHHSIFRILYH-CTAISDPY-------TAGDLLCTAEKRNDMSVMEELVKYG 468 (602)
Q Consensus 399 ~~~~~~~~~~~~~~~g~tpLh~A~~--~~~~~~~~~Ll~-~g~~~~~~-------~g~t~L~~A~~~~~~~~~~~Ll~~g 468 (602)
..+.+|||.++. +++.+++++|++ .+++++.. .|.+|+++|+..++++++++|+++|
T Consensus 112 -------------~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g 178 (672)
T PHA02730 112 -------------NINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSE 178 (672)
T ss_pred -------------ccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcC
Confidence 779999999999 899999999996 66776652 6789999999999999999999999
Q ss_pred CCCC-------CCCCCCc-CHHHHH------HHcCcHHHHHHHHHCCCCcccCCCCCCChhhH--HHHHHHHhhhceeee
Q 038432 469 LNVD-------SKDRHGR-TAIEIA------MAENNVEMVNFLVMNGSDVVGANKCEFSSTNL--NDMLQKREIGHRITV 532 (602)
Q Consensus 469 a~~n-------~~d~~g~-TpLh~A------~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~--a~~~~~~~~~~~l~~ 532 (602)
++++ ..|..+. |.||++ ...++.|++++|+++|||+|.+|.+|.||||+ |...++.|+++.|+.
T Consensus 179 ~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 179 CYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 9996 2344444 455544 35578999999999999999999999999996 444566899999987
No 40
>PHA02730 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.4e-27 Score=247.56 Aligned_cols=212 Identities=15% Similarity=0.137 Sum_probs=177.7
Q ss_pred hhhcccccccccccCCCC--CCCCCchhhhH--hhhcCcHHHHHHHHh--------------------------------
Q 038432 309 KLKDLNIGDLIAESGEED--GDPNMSVNLLT--VASTGNAAFLDELLK-------------------------------- 352 (602)
Q Consensus 309 ~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~--A~~~g~~~~~~~Ll~-------------------------------- 352 (602)
..+..+++++|++.|+++ ++.+|.||||+ |+..|+.|+++.|++
T Consensus 211 ~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (672)
T PHA02730 211 ESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTP 290 (672)
T ss_pred hccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhccc
Confidence 445677888899999875 88899999995 556678999999999
Q ss_pred cCCCCCC--------------------CCCCCch---------------------HHHHHHhcC---ChHHHHHHHhccc
Q 038432 353 ARLDPDI--------------------GDSKGRT---------------------PLHIAASKG---HEECVLVLLKHAS 388 (602)
Q Consensus 353 ~g~~~n~--------------------~d~~g~t---------------------~Lh~A~~~g---~~~~v~~Ll~~g~ 388 (602)
.|+|... .+..|.+ .||.=.+.+ +.+++++|+++||
T Consensus 291 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GA 370 (672)
T PHA02730 291 YNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGA 370 (672)
T ss_pred CCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCC
Confidence 6877655 4566654 677666655 6899999999999
Q ss_pred CCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCC----hhHHHHHHhcCC--CCCC--CCcchhHHH---HHhcC-
Q 038432 389 NVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKH----HSIFRILYHCTA--ISDP--YTAGDLLCT---AEKRN- 456 (602)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~----~~~~~~Ll~~g~--~~~~--~~g~t~L~~---A~~~~- 456 (602)
|+|. + ..|.||||+|+..++ .+++++|+++|+ +++. ..|.||||. |...+
T Consensus 371 dIN~-k-----------------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~ 432 (672)
T PHA02730 371 TMDK-T-----------------TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNC 432 (672)
T ss_pred CCCc-C-----------------CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccc
Confidence 9996 4 689999999998875 899999999998 4654 679999994 33332
Q ss_pred --------CHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCC-CCCChhhHHHHH--HHHh
Q 038432 457 --------DMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANK-CEFSSTNLNDML--QKRE 525 (602)
Q Consensus 457 --------~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~-~g~t~l~~a~~~--~~~~ 525 (602)
..+++++|+++|||+|++|..|.||||+|+..++.+++++|+++|||++.+|. .|.||+|+|+.. ++.+
T Consensus 433 ~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~e 512 (672)
T PHA02730 433 GYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTK 512 (672)
T ss_pred cccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHH
Confidence 23579999999999999999999999999999999999999999999999997 599999999874 6789
Q ss_pred hhceeeeccCCCc
Q 038432 526 IGHRITVHDDNST 538 (602)
Q Consensus 526 ~~~~l~~~~~~~~ 538 (602)
+++.|+.++++..
T Consensus 513 Iv~~LLs~ga~i~ 525 (672)
T PHA02730 513 LVDLLLSYHPTLE 525 (672)
T ss_pred HHHHHHHcCCCHH
Confidence 9999999986554
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=8.3e-28 Score=260.35 Aligned_cols=233 Identities=22% Similarity=0.257 Sum_probs=174.1
Q ss_pred HHhhhhhhcccccccccccCCC--CCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC-ChHHH
Q 038432 304 LQQHKKLKDLNIGDLIAESGEE--DGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG-HEECV 380 (602)
Q Consensus 304 l~~~~~~~~~~~~~~l~~~~~~--~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g-~~~~v 380 (602)
+.-+.+.+.....+++...+.+ .++.+|.||||.|+..++..+++.+++.|+++|..+..|.||+|+|+..| ..+++
T Consensus 378 l~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~ 457 (1143)
T KOG4177|consen 378 LHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIA 457 (1143)
T ss_pred hhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhh
Confidence 3445666667777777766643 36667777777777777777777777777777777777777777777777 77777
Q ss_pred HHHHhcccCCCchh------hHHHHhccchhHHH----------HhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--
Q 038432 381 LVLLKHASNVHLRD------YIIFMYNLSYDIII----------LLDMNGNTALWEAISSKHHSIFRILYHCTAISDP-- 442 (602)
Q Consensus 381 ~~Ll~~g~~~~~~~------~~~~~~~~~~~~~~----------~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~-- 442 (602)
..+++.|+++|... ...+...++.+... ...+.|.|+||.|...+...+++.++++|++++.
T Consensus 458 ~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~ 537 (1143)
T KOG4177|consen 458 RLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRT 537 (1143)
T ss_pred hhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhc
Confidence 77777777777765 00011111111100 0013344444444444445555555555666655
Q ss_pred CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 443 YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 443 ~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
..|.||||.|+.+|+.++|++|+++|||++.+|+.|+||||.||..|+.+|+.+|+++||++|..|.+|.|||++|...+
T Consensus 538 ~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg 617 (1143)
T KOG4177|consen 538 GRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLG 617 (1143)
T ss_pred ccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhc
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceeeeccCC
Q 038432 523 KREIGHRITVHDDN 536 (602)
Q Consensus 523 ~~~~~~~l~~~~~~ 536 (602)
+..+++.+......
T Consensus 618 ~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 618 YLSVVKLLKVVTAT 631 (1143)
T ss_pred ccchhhHHHhccCc
Confidence 99999998877755
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=5.4e-27 Score=252.04 Aligned_cols=209 Identities=14% Similarity=0.134 Sum_probs=175.2
Q ss_pred hhhhcccccccccccCCCC--CCCCCchhhhHhhhcCcHH----HHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHH
Q 038432 308 KKLKDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAA----FLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVL 381 (602)
Q Consensus 308 ~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~----~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~ 381 (602)
...+..++.+.|++.++++ ++.+|.||||.|+..|+.+ +++.|++.+...|..+ ..+++|+|+..|+.++|+
T Consensus 43 ~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk 120 (661)
T PHA02917 43 EHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--FNIFSYMKSKNVDVDLIK 120 (661)
T ss_pred hhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--cchHHHHHhhcCCHHHHH
Confidence 4446678888888888765 7778999999999999854 5677887654455543 347888899999999999
Q ss_pred HHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHH--HcCChhHHHHHHhcCCCCCCC-----Cc---------
Q 038432 382 VLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAI--SSKHHSIFRILYHCTAISDPY-----TA--------- 445 (602)
Q Consensus 382 ~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~--~~~~~~~~~~Ll~~g~~~~~~-----~g--------- 445 (602)
+|+++|+|+|.+| ..|.||||.|+ ..|+.+++++|+++|++++.. .|
T Consensus 121 ~Ll~~Gadin~~d-----------------~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 121 VLVEHGFDLSVKC-----------------ENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred HHHHcCCCCCccC-----------------CCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 9999999999998 99999999654 578999999999999999742 23
Q ss_pred --chhHHHHHh-----------cCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH--HHHHHHHHCCCCcc----c
Q 038432 446 --GDLLCTAEK-----------RNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV--EMVNFLVMNGSDVV----G 506 (602)
Q Consensus 446 --~t~L~~A~~-----------~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~--~iv~~Ll~~ga~~~----~ 506 (602)
.||||+|+. +++.+++++|+++|+|+|.+|.+|.||||+|+..|+. ++|++|++ |++++ .
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~ 262 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYI 262 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccc
Confidence 599999986 5689999999999999999999999999999999985 79999975 88875 5
Q ss_pred CCCCCCChhhHHHHHH---------HHhhhceeeeccCC
Q 038432 507 ANKCEFSSTNLNDMLQ---------KREIGHRITVHDDN 536 (602)
Q Consensus 507 ~d~~g~t~l~~a~~~~---------~~~~~~~l~~~~~~ 536 (602)
.|..|.||+++|++.+ +.++++.|+..+..
T Consensus 263 ~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~ 301 (661)
T PHA02917 263 DDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP 301 (661)
T ss_pred cCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC
Confidence 6778999999999643 56788888888753
No 43
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=7.4e-27 Score=217.40 Aligned_cols=168 Identities=14% Similarity=0.193 Sum_probs=145.5
Q ss_pred HHhhhhhhcccccccccccCCCCCCCCCchhhhHhhhcC--cHHHHHHHHhcCCCCCCCC-CCCchHHHHHHhc---CCh
Q 038432 304 LQQHKKLKDLNIGDLIAESGEEDGDPNMSVNLLTVASTG--NAAFLDELLKARLDPDIGD-SKGRTPLHIAASK---GHE 377 (602)
Q Consensus 304 l~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~g~~~n~~d-~~g~t~Lh~A~~~---g~~ 377 (602)
+..+...++.+.++.+++. .+..+..|.||||.|+..+ +.++++.|++.|+++|.++ ..|.||||+|+.. ++.
T Consensus 25 L~~A~~~~~~~~vk~Li~~-~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~ 103 (209)
T PHA02859 25 LFYYVEKDDIEGVKKWIKF-VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEP 103 (209)
T ss_pred HHHHHHhCcHHHHHHHHHh-hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccH
Confidence 4445555666666665543 3456788999999999854 8999999999999999997 5899999998864 479
Q ss_pred HHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHH--cCChhHHHHHHhcCCCCCC--CCcchhHHH-H
Q 038432 378 ECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAIS--SKHHSIFRILYHCTAISDP--YTAGDLLCT-A 452 (602)
Q Consensus 378 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~--~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~-A 452 (602)
+++++|+++|+++|.+| ..|.||||+|+. .++.+++++|+++|++++. ..|.||||. |
T Consensus 104 eiv~~Ll~~gadin~~d-----------------~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a 166 (209)
T PHA02859 104 EILKILIDSGSSITEED-----------------EDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYI 166 (209)
T ss_pred HHHHHHHHCCCCCCCcC-----------------CCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHH
Confidence 99999999999999998 999999999986 4689999999999999987 789999995 5
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcC
Q 038432 453 EKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAEN 489 (602)
Q Consensus 453 ~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~ 489 (602)
+..++.+++++|+++|++++.+|..|.||||+|+.++
T Consensus 167 ~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 167 LFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 6788999999999999999999999999999998765
No 44
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=3.9e-27 Score=225.44 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=148.9
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhH
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDI 406 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~ 406 (602)
...+|-+||..|+..|++++|+.|+++|+++|.......|||--||..|+.++||+|+++|+|++..|
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ian------------ 147 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIAN------------ 147 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccc------------
Confidence 45678899999999999999999999999999999888999999999999999999999999999998
Q ss_pred HHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHH
Q 038432 407 IILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEI 484 (602)
Q Consensus 407 ~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~ 484 (602)
..|.|.||+||..||.+++++|++.|+|+|. ..|+|+||.|+..|+.+++++|+++|+.++ +|..|.|||..
T Consensus 148 -----rhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~ 221 (615)
T KOG0508|consen 148 -----RHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLL 221 (615)
T ss_pred -----cCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHH
Confidence 9999999999999999999999999999998 899999999999999999999999999887 56779999999
Q ss_pred HHHcCcHHHHHHHHH
Q 038432 485 AMAENNVEMVNFLVM 499 (602)
Q Consensus 485 A~~~~~~~iv~~Ll~ 499 (602)
|+..|+.++|..|++
T Consensus 222 Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 222 AAVTGHTDIVERLLQ 236 (615)
T ss_pred HhhhcchHHHHHHhc
Confidence 999999999999997
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.94 E-value=1e-27 Score=207.11 Aligned_cols=180 Identities=23% Similarity=0.238 Sum_probs=170.6
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhH
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDI 406 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~ 406 (602)
.+++|+..++.++-+|+.+.+..++.+|+..|..+--+++|+.+++...+.+.+..+.+. -+|..|
T Consensus 92 t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~D------------ 157 (296)
T KOG0502|consen 92 TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACD------------ 157 (296)
T ss_pred CCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCcc------------
Confidence 788899999999999999999999999999999999999999999999999988777665 456666
Q ss_pred HHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHH
Q 038432 407 IILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEI 484 (602)
Q Consensus 407 ~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~ 484 (602)
+.|.|||.+|+..|++++|++|++.|+|++. ....++|.+|++.|..+++++|++++.|+|..|.+|-|||-+
T Consensus 158 -----e~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLly 232 (296)
T KOG0502|consen 158 -----EFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLY 232 (296)
T ss_pred -----ccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeee
Confidence 9999999999999999999999999999998 788899999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHh
Q 038432 485 AMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKRE 525 (602)
Q Consensus 485 A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~ 525 (602)
|++.++.++|+.|+..|||++..|..|.+++++|...|.+.
T Consensus 233 Avrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr~ 273 (296)
T KOG0502|consen 233 AVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYRI 273 (296)
T ss_pred eecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999873
No 46
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=2.7e-28 Score=264.08 Aligned_cols=223 Identities=22% Similarity=0.306 Sum_probs=186.8
Q ss_pred ccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCc
Q 038432 315 IGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHL 392 (602)
Q Consensus 315 ~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 392 (602)
....+...++.. .+..|.||+|.|+..|+.+.++.++..|+++|..+..|.||||.|+..++.++|+.++++|++++.
T Consensus 356 ~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~ 435 (1143)
T KOG4177|consen 356 VAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNA 435 (1143)
T ss_pred HHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhh
Confidence 444444444332 567789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh------HHHHhcc-chh----------HHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHH
Q 038432 393 RDY------IIFMYNL-SYD----------IIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAE 453 (602)
Q Consensus 393 ~~~------~~~~~~~-~~~----------~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~ 453 (602)
.+. ..+...+ ..+ ..+..-..|.||||.|++.|+.++++.|++.++..+. ..+-+++|.|.
T Consensus 436 ~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~ 515 (1143)
T KOG4177|consen 436 KAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAA 515 (1143)
T ss_pred HhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhh
Confidence 881 1111111 111 1123346678888888888888888888888765554 77788888888
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeec
Q 038432 454 KRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVH 533 (602)
Q Consensus 454 ~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~ 533 (602)
..+...+++.++++|++++.++..|.||||.||..|+.++|++|+++|||++.+|+.|+||||.|+..|+.+++.+|..+
T Consensus 516 ~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~ 595 (1143)
T KOG4177|consen 516 DEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH 595 (1143)
T ss_pred hhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc
Confidence 88888888889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCC
Q 038432 534 DDNS 537 (602)
Q Consensus 534 ~~~~ 537 (602)
++..
T Consensus 596 GA~v 599 (1143)
T KOG4177|consen 596 GASV 599 (1143)
T ss_pred CCCC
Confidence 8433
No 47
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.6e-27 Score=210.17 Aligned_cols=241 Identities=19% Similarity=0.249 Sum_probs=189.4
Q ss_pred hhcCcHHHHHHHHh-cCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcH
Q 038432 339 ASTGNAAFLDELLK-ARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTA 417 (602)
Q Consensus 339 ~~~g~~~~~~~Ll~-~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tp 417 (602)
|+.|+.-.++..++ ..-|.|.-|..|.+|||+||+.|+..+|+.|+.+|+.+|..+ ....||
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tn-----------------mgddtp 70 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTN-----------------MGDDTP 70 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhccccccccc-----------------CCCCcc
Confidence 44554444444444 356788889999999999999999999999999999999887 777899
Q ss_pred HHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHH
Q 038432 418 LWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVN 495 (602)
Q Consensus 418 Lh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~ 495 (602)
||+|+.+||.++|+.|++..+|+|. ..|+||||+||..|...+++-|+..||-++..|++|.|||..|--.-...+.+
T Consensus 71 lhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e 150 (448)
T KOG0195|consen 71 LHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLE 150 (448)
T ss_pred hhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHH
Confidence 9999999999999999999999988 78999999999999999999999999999999999999999875433333333
Q ss_pred HHHHCCCCcccCCCC-----C------------CChhhHHHHH--HHHhhhceeeeccCCCchhHHHhhhhhhhhhhhhc
Q 038432 496 FLVMNGSDVVGANKC-----E------------FSSTNLNDML--QKREIGHRITVHDDNSTQNEVLLKKLEIIDFEAKE 556 (602)
Q Consensus 496 ~Ll~~ga~~~~~d~~-----g------------~t~l~~a~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (602)
.--++|-+++..-.. | .|-.+..... -+....+.-..+.++|.+++...+.++..+..+..
T Consensus 151 ~aek~gq~~nripfkdt~wkgtktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~ri 230 (448)
T KOG0195|consen 151 IAEKHGQSPNRIPFKDTTWKGTKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARI 230 (448)
T ss_pred HHHHhCCCCCcccccccccccccccccccccccccCcchhhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhh
Confidence 333467776533211 1 1112221111 11222344567788999999999999999999999
Q ss_pred CCCCCCcceeEEEecCCCcccccccccccCeEEeccccHH
Q 038432 557 GKSKGGNCQRVSIYRGHPLVRKQACCMEAGRLIKLPNSLE 596 (602)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (602)
.++...+++++++|.+++++|+++.|..||++..++++|.
T Consensus 231 srdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 231 SRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred cchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 9999999999999999999999999999999999988764
No 48
>PHA02792 ankyrin-like protein; Provisional
Probab=99.94 E-value=1e-26 Score=240.14 Aligned_cols=213 Identities=13% Similarity=0.182 Sum_probs=133.2
Q ss_pred hhhhcccccccccccCCCC--CCCCCchhhhHhhh-cCcHHHHHHHHhcCCCCC--------------------------
Q 038432 308 KKLKDLNIGDLIAESGEED--GDPNMSVNLLTVAS-TGNAAFLDELLKARLDPD-------------------------- 358 (602)
Q Consensus 308 ~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~-~g~~~~~~~Ll~~g~~~n-------------------------- 358 (602)
...++++++++|++.|+++ ++..+.+|+|+|+. .|+.|++++|++.|+|++
T Consensus 80 s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (631)
T PHA02792 80 SDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDEL 159 (631)
T ss_pred HhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhc
Confidence 3556778888888888766 55567788888866 688899999998887632
Q ss_pred ----------CCCCCCchHHHHHHhcC-------ChHHHHHHHhcccCCCchh------hHHHHhcc-------------
Q 038432 359 ----------IGDSKGRTPLHIAASKG-------HEECVLVLLKHASNVHLRD------YIIFMYNL------------- 402 (602)
Q Consensus 359 ----------~~d~~g~t~Lh~A~~~g-------~~~~v~~Ll~~g~~~~~~~------~~~~~~~~------------- 402 (602)
..|..|.||||+|+.++ +.++++.|+++|++++..| ...++...
T Consensus 160 ~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 160 DDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred cccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence 23456888999999888 7899999999998888777 00000000
Q ss_pred ------------------------chh--HHH------------------------------------------------
Q 038432 403 ------------------------SYD--III------------------------------------------------ 408 (602)
Q Consensus 403 ------------------------~~~--~~~------------------------------------------------ 408 (602)
..+ ++.
T Consensus 240 ~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v 319 (631)
T PHA02792 240 NYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTV 319 (631)
T ss_pred cccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCc
Confidence 000 000
Q ss_pred ------Hh-----h---ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CC--cchhHHHHHhcCCHH---HHHHHHHc
Q 038432 409 ------LL-----D---MNGNTALWEAISSKHHSIFRILYHCTAISDP--YT--AGDLLCTAEKRNDMS---VMEELVKY 467 (602)
Q Consensus 409 ------~~-----~---~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~--g~t~L~~A~~~~~~~---~~~~Ll~~ 467 (602)
.. + ..+..+++.|+..|+.+++++|+++||+++. .. +.||||.|+..+..+ ++++|+++
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~ 399 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY 399 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc
Confidence 00 1 1123445566666666666666666666654 12 235666655544432 35555666
Q ss_pred CCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHH
Q 038432 468 GLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDM 520 (602)
Q Consensus 468 ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~ 520 (602)
|||+|.+|..|.||||+|+..++.+++++|+++|||++.+|..|.||+++|..
T Consensus 400 GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 400 IDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred CCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 66666666666666666666666666666666666666666666666666654
No 49
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=8.8e-24 Score=236.39 Aligned_cols=174 Identities=15% Similarity=0.110 Sum_probs=155.2
Q ss_pred HHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHH
Q 038432 344 AAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAIS 423 (602)
Q Consensus 344 ~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~ 423 (602)
.++-..+.+.+.. ..+..+.++||.||..|+.++++.|++.|+|+|..| ..|.||||+|+.
T Consensus 507 l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d-----------------~~G~TpLh~Aa~ 567 (823)
T PLN03192 507 LNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGD-----------------SKGRTPLHIAAS 567 (823)
T ss_pred ccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------------CCCCCHHHHHHH
Confidence 3344445454433 244567899999999999999999999999999998 999999999999
Q ss_pred cCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCC
Q 038432 424 SKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNG 501 (602)
Q Consensus 424 ~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~g 501 (602)
.|+.+++++|+++|++++. ..|+||||.|+..|+.+++++|++.++..+. ..|.||||.|+..|+.+++++|+++|
T Consensus 568 ~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~G 645 (823)
T PLN03192 568 KGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQG 645 (823)
T ss_pred cChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCC
Confidence 9999999999999999987 7899999999999999999999998887653 45789999999999999999999999
Q ss_pred CCcccCCCCCCChhhHHHHHHHHhhhceeeeccCCCc
Q 038432 502 SDVVGANKCEFSSTNLNDMLQKREIGHRITVHDDNST 538 (602)
Q Consensus 502 a~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~ 538 (602)
+|+|.+|.+|.||||+|+..++.++++.|+.++++..
T Consensus 646 adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999998876544
No 50
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=7.9e-26 Score=195.48 Aligned_cols=183 Identities=19% Similarity=0.171 Sum_probs=164.6
Q ss_pred cccccccccCC--CCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCC
Q 038432 314 NIGDLIAESGE--EDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVH 391 (602)
Q Consensus 314 ~~~~~l~~~~~--~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~ 391 (602)
.....++..+. +..+--+++|+.+++...+++.+..+.++ .+|..|+.|.|||.||+..|+.++|++|++.|||++
T Consensus 110 ~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~ 187 (296)
T KOG0502|consen 110 DKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPD 187 (296)
T ss_pred ceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChh
Confidence 33344444443 33455678999999999988887666554 689999999999999999999999999999999999
Q ss_pred chhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCC
Q 038432 392 LRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGL 469 (602)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga 469 (602)
... +...|+|.+|++.|..++|++|+.++.|+|. .+|.|||-+|++.|+.+|++.|++.||
T Consensus 188 ~lg-----------------k~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA 250 (296)
T KOG0502|consen 188 ALG-----------------KYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA 250 (296)
T ss_pred hhh-----------------hhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCC
Confidence 987 8889999999999999999999999999998 899999999999999999999999999
Q ss_pred CCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhh
Q 038432 470 NVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTN 516 (602)
Q Consensus 470 ~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~ 516 (602)
|++..|..|++++..|+..|+. +|+..+++-++.+.+|+.-.||+|
T Consensus 251 d~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 251 DVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred CcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence 9999999999999999999998 999999999999999999999986
No 51
>PHA02792 ankyrin-like protein; Provisional
Probab=99.93 E-value=2e-24 Score=223.35 Aligned_cols=180 Identities=15% Similarity=0.158 Sum_probs=140.3
Q ss_pred CCCCCCchhhhHhhhcC-------cHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC--ChHHHHHHHhccc--------
Q 038432 326 DGDPNMSVNLLTVASTG-------NAAFLDELLKARLDPDIGDSKGRTPLHIAASKG--HEECVLVLLKHAS-------- 388 (602)
Q Consensus 326 ~~~~~g~t~L~~A~~~g-------~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~-------- 388 (602)
.++..|.||||+|+..+ +.++++.|+++|++++..|..|.||||+|+.+. ..|++++|++..-
T Consensus 170 ~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~ 249 (631)
T PHA02792 170 YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNI 249 (631)
T ss_pred cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhH
Confidence 45677899999999988 789999999999999999999999999998888 6777777765311
Q ss_pred --------------CCC--chh----------------------------------------------------------
Q 038432 389 --------------NVH--LRD---------------------------------------------------------- 394 (602)
Q Consensus 389 --------------~~~--~~~---------------------------------------------------------- 394 (602)
+++ ..+
T Consensus 250 l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId 329 (631)
T PHA02792 250 LSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMID 329 (631)
T ss_pred HHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence 011 000
Q ss_pred -------------hHHHHhccchhHHHH----------hhcc--CCcHHHHHHHcCCh---hHHHHHHhcCCCCCC--CC
Q 038432 395 -------------YIIFMYNLSYDIIIL----------LDMN--GNTALWEAISSKHH---SIFRILYHCTAISDP--YT 444 (602)
Q Consensus 395 -------------~~~~~~~~~~~~~~~----------~~~~--g~tpLh~A~~~~~~---~~~~~Ll~~g~~~~~--~~ 444 (602)
...++..++.++++. .|.. |.||||+|+..+.. +++++|+++|+++|. ..
T Consensus 330 ~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~ 409 (631)
T PHA02792 330 EGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKH 409 (631)
T ss_pred CCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccccccc
Confidence 111223344444433 2444 46999998877665 468899999999998 78
Q ss_pred cchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHH--c--------CcHHHHHHHHHCCCCcc
Q 038432 445 AGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMA--E--------NNVEMVNFLVMNGSDVV 505 (602)
Q Consensus 445 g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~--~--------~~~~iv~~Ll~~ga~~~ 505 (602)
|.||||+|+..++.+++++|+++|+++|.+|..|+||||+|+. . ...+++++|+++|.+++
T Consensus 410 G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 410 GRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred CcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999999986 2 23577999999998876
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.92 E-value=4.7e-25 Score=215.89 Aligned_cols=169 Identities=25% Similarity=0.294 Sum_probs=137.8
Q ss_pred hhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccC
Q 038432 335 LLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNG 414 (602)
Q Consensus 335 L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 414 (602)
+.-|+..|+.+-+..|+..|+++|..+.+|.|+||-||...+.+||++|+++|++||..| ..|
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d-----------------~e~ 106 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQD-----------------NEG 106 (527)
T ss_pred HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccc-----------------ccc
Confidence 455666777777777777777777777777777777777777777777777777777776 677
Q ss_pred CcHHHHHHHcCChhHHHHHHhcCCCC------------------------------------------------------
Q 038432 415 NTALWEAISSKHHSIFRILYHCTAIS------------------------------------------------------ 440 (602)
Q Consensus 415 ~tpLh~A~~~~~~~~~~~Ll~~g~~~------------------------------------------------------ 440 (602)
+||||.|+..|+..++++|+++|+++
T Consensus 107 wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~ 186 (527)
T KOG0505|consen 107 WTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN 186 (527)
T ss_pred CCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh
Confidence 77777777777777777777666532
Q ss_pred -----CC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCC
Q 038432 441 -----DP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFS 513 (602)
Q Consensus 441 -----~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t 513 (602)
+. ..|.|.||.|+.+|..++.++|+++|.+++.+|.+|+||||.|+..|..+++++|+++|++++.++..|.|
T Consensus 187 ~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~ 266 (527)
T KOG0505|consen 187 AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGET 266 (527)
T ss_pred ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCC
Confidence 11 24889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHH
Q 038432 514 STNLNDM 520 (602)
Q Consensus 514 ~l~~a~~ 520 (602)
|+++|..
T Consensus 267 p~dv~de 273 (527)
T KOG0505|consen 267 PLDVADE 273 (527)
T ss_pred Cccchhh
Confidence 9999864
No 53
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=2.6e-24 Score=192.69 Aligned_cols=144 Identities=18% Similarity=0.163 Sum_probs=127.0
Q ss_pred cCCCCCCCCCCCchHHHHHHhcCCh----HHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChh
Q 038432 353 ARLDPDIGDSKGRTPLHIAASKGHE----ECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHS 428 (602)
Q Consensus 353 ~g~~~n~~d~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~ 428 (602)
+|++++..+.++.++||.||+.|+. +++++|++.|++++..| ..|+||||+|+..|+.+
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d-----------------~~g~t~Lh~Aa~~g~~~ 71 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYD-----------------HHGRQCTHMVAWYDRAN 71 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccC-----------------CCCCcHHHHHHHhCccC
Confidence 4677777888888999999999987 66667888888888877 88999999999988765
Q ss_pred H---HHHHHhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCC
Q 038432 429 I---FRILYHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVK-YGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNG 501 (602)
Q Consensus 429 ~---~~~Ll~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~-~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~g 501 (602)
. +++|+++|++++. ..|.||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 72 ~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g 151 (166)
T PHA02743 72 AVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANG 151 (166)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4 7899999998887 258899999999999999999995 89999999999999999999999999999999999
Q ss_pred CCcccCCCCCCC
Q 038432 502 SDVVGANKCEFS 513 (602)
Q Consensus 502 a~~~~~d~~g~t 513 (602)
++++.++..|.+
T Consensus 152 a~~~~~~~~~~~ 163 (166)
T PHA02743 152 AVCDDPLSIGLS 163 (166)
T ss_pred CCCCCcccCCcc
Confidence 999999988864
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=3.4e-25 Score=205.71 Aligned_cols=160 Identities=21% Similarity=0.283 Sum_probs=146.9
Q ss_pred CCCCCCCCchHHHHHHhcCChHHHHHHHhcc-cCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHc-----CChhHH
Q 038432 357 PDIGDSKGRTPLHIAASKGHEECVLVLLKHA-SNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISS-----KHHSIF 430 (602)
Q Consensus 357 ~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~-----~~~~~~ 430 (602)
+|..|.+|+|+||||+.+++.++|+.||+.| +++|..+ +-|+||+++|+.. .+.++|
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qN-----------------rAGYtpiMLaALA~lk~~~d~~vV 323 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQN-----------------RAGYTPVMLAALAKLKQPADRTVV 323 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccc-----------------cccccHHHHHHHHhhcchhhHHHH
Confidence 6889999999999999999999999999986 5888887 9999999999864 467788
Q ss_pred HHHHhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHC-CCCccc
Q 038432 431 RILYHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMN-GSDVVG 506 (602)
Q Consensus 431 ~~Ll~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~-ga~~~~ 506 (602)
.-|.+.| |+|. ..|.|+|++|+..|+.++++.||..|||+|.+|.+|.|+|+.||.+||.||+++||.. ++|+..
T Consensus 324 ~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL 402 (452)
T KOG0514|consen 324 ERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL 402 (452)
T ss_pred HHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee
Confidence 8888876 4554 7899999999999999999999999999999999999999999999999999999985 899999
Q ss_pred CCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 507 ANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 507 ~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
.|.+|-|+|.+|...|++||+..|..+.
T Consensus 403 tD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 403 TDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred ecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 9999999999999999999988887664
No 55
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91 E-value=2.1e-24 Score=240.36 Aligned_cols=216 Identities=19% Similarity=0.086 Sum_probs=149.9
Q ss_pred hhhhhccccccccccc--CC--CCCCCCCchhhh-HhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcC---ChH
Q 038432 307 HKKLKDLNIGDLIAES--GE--EDGDPNMSVNLL-TVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKG---HEE 378 (602)
Q Consensus 307 ~~~~~~~~~~~~l~~~--~~--~~~~~~g~t~L~-~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g---~~~ 378 (602)
+...++....+.+++. +. +..+..|+|||| .|+.+++.++++.|++.|+ .+..|.||||.|+..+ ..+
T Consensus 24 A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ 99 (743)
T TIGR00870 24 AAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEA 99 (743)
T ss_pred HHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHH
Confidence 4444444444444443 22 224566777777 6666667777777777665 4566777777766521 122
Q ss_pred HHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC----------------
Q 038432 379 CVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP---------------- 442 (602)
Q Consensus 379 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~---------------- 442 (602)
+++.+...+.+.+..... .+.....+..|.||||+|+.+|+.+++++|+++|++++.
T Consensus 100 ll~~l~~~~~~~~~~~~~-------~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~ 172 (743)
T TIGR00870 100 ILLHLLAAFRKSGPLELA-------NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSF 172 (743)
T ss_pred HHHHHhhcccccCchhhh-------ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcc
Confidence 223333222111000000 000001124699999999999999999999999999874
Q ss_pred CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcC---------cHHHHHHHHHCCCCc-------cc
Q 038432 443 YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAEN---------NVEMVNFLVMNGSDV-------VG 506 (602)
Q Consensus 443 ~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~---------~~~iv~~Ll~~ga~~-------~~ 506 (602)
..|.||||.|+..|+.+++++|+++|+|+|.+|..|+||||+|+..+ ...+.+++++.+++. +.
T Consensus 173 ~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i 252 (743)
T TIGR00870 173 YHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI 252 (743)
T ss_pred cccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence 25889999999999999999999999999999999999999999986 234666777665554 77
Q ss_pred CCCCCCChhhHHHHHHHHhhhceeeec
Q 038432 507 ANKCEFSSTNLNDMLQKREIGHRITVH 533 (602)
Q Consensus 507 ~d~~g~t~l~~a~~~~~~~~~~~l~~~ 533 (602)
.|.+|.||||+|+..++.++++.++..
T Consensus 253 ~N~~g~TPL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 253 LNHQGLTPLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred cCCCCCCchhhhhhcCCccHHHHHHHH
Confidence 899999999999999999988888764
No 56
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89 E-value=3.9e-23 Score=192.08 Aligned_cols=163 Identities=24% Similarity=0.280 Sum_probs=147.7
Q ss_pred ccCCCCCCCCCchhhhHhhhcCcHHHHHHHHhcC-CCCCCCCCCCchHHHHHHhc-----CChHHHHHHHhcccCCCchh
Q 038432 321 ESGEEDGDPNMSVNLLTVASTGNAAFLDELLKAR-LDPDIGDSKGRTPLHIAASK-----GHEECVLVLLKHASNVHLRD 394 (602)
Q Consensus 321 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~n~~d~~g~t~Lh~A~~~-----g~~~~v~~Ll~~g~~~~~~~ 394 (602)
+...+..|.+|.|+||+|+.+++.++|+.||+.| +++|.+|.-|.||.++|+.. .+.++|..|...| |+|++-
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 3345668999999999999999999999999987 79999999999999999854 4678898888765 777765
Q ss_pred hHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHc-CCCC
Q 038432 395 YIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKY-GLNV 471 (602)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~-ga~~ 471 (602)
-..|.|+|++|+.+|+.++|+.||.+|||+|. .+|.|+|++|+..|+.+++++||.. +.|+
T Consensus 337 ----------------sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~ 400 (452)
T KOG0514|consen 337 ----------------SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDI 400 (452)
T ss_pred ----------------hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccc
Confidence 37899999999999999999999999999998 8999999999999999999999974 7899
Q ss_pred CCCCCCCcCHHHHHHHcCcHHHHHHHHHC
Q 038432 472 DSKDRHGRTAIEIAMAENNVEMVNFLVMN 500 (602)
Q Consensus 472 n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ 500 (602)
...|.+|.|+|.+|...|+.||.-+|-.+
T Consensus 401 sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 401 SLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred eeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 99999999999999999999999998754
No 57
>PHA02741 hypothetical protein; Provisional
Probab=99.89 E-value=1.5e-22 Score=182.32 Aligned_cols=132 Identities=20% Similarity=0.208 Sum_probs=117.6
Q ss_pred CCCCCCCCchHHHHHHhcCChHHHHHHHh------cccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCC----
Q 038432 357 PDIGDSKGRTPLHIAASKGHEECVLVLLK------HASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKH---- 426 (602)
Q Consensus 357 ~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~---- 426 (602)
++.+|..|.||||+|+..|+.++++.|+. .|++++.+| ..|.||||+|+..|+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d-----------------~~g~T~Lh~A~~~g~~~~~ 76 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATD-----------------DAGQMCIHIAAEKHEAQLA 76 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccC-----------------CCCCcHHHHHHHcCChHHH
Confidence 45578899999999999999999999864 368888887 899999999999998
Q ss_pred hhHHHHHHhcCCCCCC--C-CcchhHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCC
Q 038432 427 HSIFRILYHCTAISDP--Y-TAGDLLCTAEKRNDMSVMEELVK-YGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGS 502 (602)
Q Consensus 427 ~~~~~~Ll~~g~~~~~--~-~g~t~L~~A~~~~~~~~~~~Ll~-~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga 502 (602)
.+++++|+++|++++. . .|+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..++.+++++|++.++
T Consensus 77 ~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 77 AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 5889999999999987 2 78999999999999999999997 599999999999999999999999999999998876
Q ss_pred Ccc
Q 038432 503 DVV 505 (602)
Q Consensus 503 ~~~ 505 (602)
...
T Consensus 157 ~~~ 159 (169)
T PHA02741 157 TSR 159 (169)
T ss_pred Hhc
Confidence 643
No 58
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.88 E-value=6.2e-23 Score=207.85 Aligned_cols=201 Identities=23% Similarity=0.252 Sum_probs=176.9
Q ss_pred HHHhhhhhhcccccccccccCC--CCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHH
Q 038432 303 FLQQHKKLKDLNIGDLIAESGE--EDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECV 380 (602)
Q Consensus 303 ll~~~~~~~~~~~~~~l~~~~~--~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v 380 (602)
+++.+.-.++..+.+++.+..+ +..+..|.+|||+|+..|+.++++.++.++..+|..+..|.||||.|+++||.+++
T Consensus 52 alhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv 131 (854)
T KOG0507|consen 52 LLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVV 131 (854)
T ss_pred HHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHH
Confidence 3455555566666666666553 34667889999999999999999999999989999999999999999999999999
Q ss_pred HHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCC----------CCCCCcchhHH
Q 038432 381 LVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAI----------SDPYTAGDLLC 450 (602)
Q Consensus 381 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~----------~~~~~g~t~L~ 450 (602)
.+|+.+|+|+-..+ +.+.|+|..|++.|..++++.|++..-+ .....+.+|||
T Consensus 132 ~~Ll~~~adp~i~n-----------------ns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH 194 (854)
T KOG0507|consen 132 FYLLKKNADPFIRN-----------------NSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH 194 (854)
T ss_pred HHHHhcCCCccccC-----------------cccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc
Confidence 99999999999998 9999999999999999999999976221 11256678999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHH
Q 038432 451 TAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDML 521 (602)
Q Consensus 451 ~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~ 521 (602)
.|+++|+.++++.|++.|.|+|.....| |+||.|+..|..++|.+|++.|.+..++|.+|.|+|++-...
T Consensus 195 laakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~ 264 (854)
T KOG0507|consen 195 LAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDL 264 (854)
T ss_pred hhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhc
Confidence 9999999999999999999999887776 999999999999999999999999999999999999986544
No 59
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.88 E-value=4.5e-23 Score=208.83 Aligned_cols=195 Identities=20% Similarity=0.149 Sum_probs=178.4
Q ss_pred CCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchh
Q 038432 326 DGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYD 405 (602)
Q Consensus 326 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~ 405 (602)
..+.+|.|.||.|+.+|+.++.+.|++..+-++..|..|.+|||+|+..|+.++|+.|+.++..+|..+
T Consensus 44 ~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~----------- 112 (854)
T KOG0507|consen 44 LQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN----------- 112 (854)
T ss_pred ccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc-----------
Confidence 377899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCC--------CCCC
Q 038432 406 IIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNV--------DSKD 475 (602)
Q Consensus 406 ~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~--------n~~d 475 (602)
..|.||||.|+++||.+++.+|+++|+|+-. ..+.|+|-.|++.|..++++.|++...++ ..++
T Consensus 113 ------~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~ 186 (854)
T KOG0507|consen 113 ------IENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRP 186 (854)
T ss_pred ------ccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCC
Confidence 8999999999999999999999999999877 78999999999999999999999773322 3456
Q ss_pred CCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccCCCc
Q 038432 476 RHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDDNST 538 (602)
Q Consensus 476 ~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~ 538 (602)
-.+-+|||.|+++|+.++++.|++.|.|+|...++| |+||-|+..|..+++..++..+.+..
T Consensus 187 ~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h 248 (854)
T KOG0507|consen 187 FPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTH 248 (854)
T ss_pred CCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccc
Confidence 678899999999999999999999999999887776 99999999999999999887765443
No 60
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88 E-value=3.1e-22 Score=179.20 Aligned_cols=138 Identities=22% Similarity=0.172 Sum_probs=123.8
Q ss_pred CCCCCchhhhHhhhcCcH----HHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHH---HHHHHhcccCCCchhhHHHH
Q 038432 327 GDPNMSVNLLTVASTGNA----AFLDELLKARLDPDIGDSKGRTPLHIAASKGHEEC---VLVLLKHASNVHLRDYIIFM 399 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~----~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~---v~~Ll~~g~~~~~~~~~~~~ 399 (602)
.+.++.++||.||+.|+. ++++.|++.|++++..|..|+||||+|+..|+.+. +++|+++|+++|.++
T Consensus 16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d----- 90 (166)
T PHA02743 16 IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARE----- 90 (166)
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCC-----
Confidence 455678899999999998 56667778899999999999999999999998764 899999999999986
Q ss_pred hccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHh-cCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Q 038432 400 YNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYH-CTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDR 476 (602)
Q Consensus 400 ~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~-~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~ 476 (602)
+..|.||||+|+..|+.+++++|++ .|++++. ..|.||||+|+..++.+++++|+++|+++|.++.
T Consensus 91 -----------~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 159 (166)
T PHA02743 91 -----------LGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLS 159 (166)
T ss_pred -----------CCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence 2479999999999999999999995 8999887 7899999999999999999999999999999998
Q ss_pred CCcC
Q 038432 477 HGRT 480 (602)
Q Consensus 477 ~g~T 480 (602)
.|..
T Consensus 160 ~~~~ 163 (166)
T PHA02743 160 IGLS 163 (166)
T ss_pred CCcc
Confidence 8753
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=2.9e-22 Score=192.83 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=105.1
Q ss_pred CCCCch-hhhHhhhcCcHHHHHHHHhcCCCCCCCC----CCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhcc
Q 038432 328 DPNMSV-NLLTVASTGNAAFLDELLKARLDPDIGD----SKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNL 402 (602)
Q Consensus 328 ~~~g~t-~L~~A~~~g~~~~~~~Ll~~g~~~n~~d----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 402 (602)
+..|.| +||.|+..|+.++++.|++.|+|+|.++ ..|.||||+|+..|+.+++++|+++|||+|..+
T Consensus 29 d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~-------- 100 (300)
T PHA02884 29 NKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA-------- 100 (300)
T ss_pred CcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc--------
Confidence 344444 4555666677777887777777777763 467778888877777788887777777777653
Q ss_pred chhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 038432 403 SYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRT 480 (602)
Q Consensus 403 ~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~T 480 (602)
+..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..++.+++..+. |.. .+..+.+
T Consensus 101 --------~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~ 167 (300)
T PHA02884 101 --------EEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKH 167 (300)
T ss_pred --------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccC
Confidence 14677777777777777777777777777776 56777777777777776664443 222 3455667
Q ss_pred HHHHHHHcCcHHHHHHHHHCCC
Q 038432 481 AIEIAMAENNVEMVNFLVMNGS 502 (602)
Q Consensus 481 pLh~A~~~~~~~iv~~Ll~~ga 502 (602)
|++++ ++.+++++|+++++
T Consensus 168 ~~~~~---~n~ei~~~Lish~v 186 (300)
T PHA02884 168 PKKIL---INFDILKILVSHFI 186 (300)
T ss_pred hhhhh---ccHHHHHHHHHHHH
Confidence 77764 35777777777766
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=2.1e-22 Score=178.89 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=112.9
Q ss_pred CCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCCh---hHHHHH
Q 038432 357 PDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHH---SIFRIL 433 (602)
Q Consensus 357 ~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~---~~~~~L 433 (602)
.+.+|.+|.||||+||..|+ ++.++...+...+.. ...+...|..|.||||+|+..|+. +++++|
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~----------~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~L 77 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDEN----------RYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLL 77 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchh----------HHHHHHhcCCCCEEEEeecccCchhHHHHHHHH
Confidence 45678899999999999998 444444443322211 011223358999999999999987 468899
Q ss_pred HhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcc
Q 038432 434 YHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVK-YGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVV 505 (602)
Q Consensus 434 l~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~-~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~ 505 (602)
+++|++++. ..|+||||+|+..|+.+++++|++ .|+++|.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 78 l~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 78 MEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999987 369999999999999999999998 599999999999999999999999999999999999876
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.87 E-value=5.8e-22 Score=190.74 Aligned_cols=157 Identities=13% Similarity=0.065 Sum_probs=129.7
Q ss_pred CCCCCCCCch-HHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHh
Q 038432 357 PDIGDSKGRT-PLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYH 435 (602)
Q Consensus 357 ~n~~d~~g~t-~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~ 435 (602)
+-.+|..|.| +||.|+..|+.+++++|+++|+|+|..+. ..+..|.||||+|+..|+.+++++|++
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~-------------~sd~~g~TpLh~Aa~~~~~eivklLL~ 91 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP-------------LSENSKTNPLIYAIDCDNDDAAKLLIR 91 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc-------------ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3456777776 56777788999999999999999998730 002689999999999999999999999
Q ss_pred cCCCCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCC
Q 038432 436 CTAISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEF 512 (602)
Q Consensus 436 ~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~ 512 (602)
+||+++. ..|.||||.|+..|+.+++++|+++|+++|.+|..|.||||+|+..++.+++.++. |.. .+..+.
T Consensus 92 ~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~ 166 (300)
T PHA02884 92 YGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYK 166 (300)
T ss_pred cCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---cccccc
Confidence 9999997 35899999999999999999999999999999999999999999999999886665 332 466778
Q ss_pred ChhhHHHHHHHHhhhceeeecc
Q 038432 513 SSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 513 t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
+|.+++ .+.++++.|+.+.
T Consensus 167 ~~~~~~---~n~ei~~~Lish~ 185 (300)
T PHA02884 167 HPKKIL---INFDILKILVSHF 185 (300)
T ss_pred Chhhhh---ccHHHHHHHHHHH
Confidence 888865 2455555555444
No 64
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.87 E-value=5.7e-22 Score=165.24 Aligned_cols=138 Identities=23% Similarity=0.197 Sum_probs=125.9
Q ss_pred HHHHHHhcCChHHHHHHHhcccC-CCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--C
Q 038432 367 PLHIAASKGHEECVLVLLKHASN-VHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--Y 443 (602)
Q Consensus 367 ~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~ 443 (602)
.+.+|+..+....|+.||+..++ +|.+| .+|.||||.|+++|+.+||+.|+..||+++. .
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD-----------------~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~ 128 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRD-----------------EDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTN 128 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccc-----------------cccccHHHHHHhcCchHHHHHHHHccCCcccccc
Confidence 46799999999999999987664 78887 9999999999999999999999999999998 8
Q ss_pred CcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH-HHHHHHHH-CCCCcccCCCCCCChhhHHHHH
Q 038432 444 TAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV-EMVNFLVM-NGSDVVGANKCEFSSTNLNDML 521 (602)
Q Consensus 444 ~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~-~iv~~Ll~-~ga~~~~~d~~g~t~l~~a~~~ 521 (602)
.||||||.||+.++.+++-.|+++|+|||+......||||+||...+. ..+.+|+. .+.++-.++..+.||+.+|.+.
T Consensus 129 ~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 129 EGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred cCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence 999999999999999999999999999999999999999999988775 56666664 6899999999999999999655
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.86 E-value=1.9e-21 Score=162.20 Aligned_cols=141 Identities=23% Similarity=0.189 Sum_probs=126.8
Q ss_pred hhhhHhhhcCcHHHHHHHHhcCCC-CCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhh
Q 038432 333 VNLLTVASTGNAAFLDELLKARLD-PDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLD 411 (602)
Q Consensus 333 t~L~~A~~~g~~~~~~~Ll~~g~~-~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~ 411 (602)
..+.+|+..+.+..|+.||+..++ +|.+|.+|.||||-|+++|+.+||+.|+..|||++.+.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T----------------- 127 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT----------------- 127 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc-----------------
Confidence 357789999999999999997665 89999999999999999999999999999999999998
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCC-HHHHHHHH-HcCCCCCCCCCCCcCHHHHHHH
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRND-MSVMEELV-KYGLNVDSKDRHGRTAIEIAMA 487 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~-~~~~~~Ll-~~ga~~n~~d~~g~TpLh~A~~ 487 (602)
..|+||||-||.-++.+++..|+++|+|+|. ....||||.||...+ ...+++|+ +.+.++-.++..+.||+.+|-+
T Consensus 128 ~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARR 207 (228)
T KOG0512|consen 128 NEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARR 207 (228)
T ss_pred ccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHH
Confidence 9999999999999999999999999999999 666799999998876 45666665 4678888899999999999977
Q ss_pred cCc
Q 038432 488 ENN 490 (602)
Q Consensus 488 ~~~ 490 (602)
.+-
T Consensus 208 T~~ 210 (228)
T KOG0512|consen 208 TSM 210 (228)
T ss_pred hhh
Confidence 653
No 66
>PHA02741 hypothetical protein; Provisional
Probab=99.86 E-value=3.8e-21 Score=173.17 Aligned_cols=130 Identities=18% Similarity=0.171 Sum_probs=117.7
Q ss_pred CCCCCCchhhhHhhhcCcHHHHHHHHh------cCCCCCCCCCCCchHHHHHHhcCC----hHHHHHHHhcccCCCchhh
Q 038432 326 DGDPNMSVNLLTVASTGNAAFLDELLK------ARLDPDIGDSKGRTPLHIAASKGH----EECVLVLLKHASNVHLRDY 395 (602)
Q Consensus 326 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~------~g~~~n~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~~~~~~~~ 395 (602)
.++..|.||||+|++.|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+++|+++|.++
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~- 94 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE- 94 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC-
Confidence 346789999999999999999999853 368899999999999999999999 589999999999999886
Q ss_pred HHHHhccchhHHHHhhc-cCCcHHHHHHHcCChhHHHHHHh-cCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCC
Q 038432 396 IIFMYNLSYDIIILLDM-NGNTALWEAISSKHHSIFRILYH-CTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNV 471 (602)
Q Consensus 396 ~~~~~~~~~~~~~~~~~-~g~tpLh~A~~~~~~~~~~~Ll~-~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~ 471 (602)
. .|+||||+|+..++.+++++|++ .|++++. ..|+||||+|+..++.+++++|++.++..
T Consensus 95 ----------------~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 95 ----------------MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred ----------------cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 5 89999999999999999999997 5888876 78999999999999999999999987654
Q ss_pred C
Q 038432 472 D 472 (602)
Q Consensus 472 n 472 (602)
.
T Consensus 159 ~ 159 (169)
T PHA02741 159 R 159 (169)
T ss_pred c
Confidence 3
No 67
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.85 E-value=5.2e-21 Score=196.85 Aligned_cols=192 Identities=24% Similarity=0.246 Sum_probs=164.0
Q ss_pred CCchhhhHhhhcCcHHHHHHHHhcC---------CCCCCCCCCCchHHHHHHh---cCChHHHHHHHhcccCCCchhhHH
Q 038432 330 NMSVNLLTVASTGNAAFLDELLKAR---------LDPDIGDSKGRTPLHIAAS---KGHEECVLVLLKHASNVHLRDYII 397 (602)
Q Consensus 330 ~g~t~L~~A~~~g~~~~~~~Ll~~g---------~~~n~~d~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~ 397 (602)
..+.++..|...+.++.+..++..+ .+++.+...|.|.||.|.. .++.++++.|++.-... .+
T Consensus 100 ~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~l--in--- 174 (782)
T KOG3676|consen 100 FDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKL--IN--- 174 (782)
T ss_pred cchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHH--hh---
Confidence 3347788999999998888887655 6788888999999999986 45679999999863210 00
Q ss_pred HHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC-------------------------CCcchhHHHH
Q 038432 398 FMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP-------------------------YTAGDLLCTA 452 (602)
Q Consensus 398 ~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~-------------------------~~g~t~L~~A 452 (602)
. +-......|.||||+|+.+.+.++|++|++.|||++. +-|+.||..|
T Consensus 175 d-------~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfA 247 (782)
T KOG3676|consen 175 D-------IYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFA 247 (782)
T ss_pred h-------hhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHH
Confidence 0 0001136799999999999999999999999999874 1366799999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCC--cccCCCCCCChhhHHHHHHHHhhhcee
Q 038432 453 EKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSD--VVGANKCEFSSTNLNDMLQKREIGHRI 530 (602)
Q Consensus 453 ~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~--~~~~d~~g~t~l~~a~~~~~~~~~~~l 530 (602)
|..++++++++|+++|||+|++|++|+|.||..+..-..++..+++++|++ ...+|++|.|||.+|+..|+.++.+.+
T Consensus 248 AC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~i 327 (782)
T KOG3676|consen 248 ACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHI 327 (782)
T ss_pred HHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999998888
Q ss_pred eec
Q 038432 531 TVH 533 (602)
Q Consensus 531 ~~~ 533 (602)
+..
T Consensus 328 le~ 330 (782)
T KOG3676|consen 328 LER 330 (782)
T ss_pred HHh
Confidence 766
No 68
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.84 E-value=5e-21 Score=213.29 Aligned_cols=214 Identities=17% Similarity=0.069 Sum_probs=156.0
Q ss_pred HHHH-hhhhhhcccccccccccCCCCCCCCCchhhhHhhhcC---cHHHHHHHHhcCCC------CCC----CCCCCchH
Q 038432 302 NFLQ-QHKKLKDLNIGDLIAESGEEDGDPNMSVNLLTVASTG---NAAFLDELLKARLD------PDI----GDSKGRTP 367 (602)
Q Consensus 302 ~ll~-~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A~~~g---~~~~~~~Ll~~g~~------~n~----~d~~g~t~ 367 (602)
+.++ .+...+..++.++|.+.+. .+..|.||||.|+..+ ...++..+...+.+ ++. .+..|.||
T Consensus 54 t~Lh~~A~~~~~~eiv~lLl~~g~--~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~Tp 131 (743)
T TIGR00870 54 SALFVAAIENENLELTELLLNLSC--RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITA 131 (743)
T ss_pred hHHHHHHHhcChHHHHHHHHhCCC--CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcH
Confidence 3444 5556666777777777665 5678999999998722 22344444444322 111 23569999
Q ss_pred HHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCc
Q 038432 368 LHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTA 445 (602)
Q Consensus 368 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g 445 (602)
||+||..|+.++|++|+++|+|++.++.......... ......|.||||.|+..|+.+++++|+++|+|++. ..|
T Consensus 132 LhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~---~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g 208 (743)
T TIGR00870 132 LHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQG---VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLG 208 (743)
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCC---CCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhh
Confidence 9999999999999999999999997641100000000 00014689999999999999999999999999987 789
Q ss_pred chhHHHHHhcC---------CHHHHHHHHHcCCCC-------CCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCC
Q 038432 446 GDLLCTAEKRN---------DMSVMEELVKYGLNV-------DSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANK 509 (602)
Q Consensus 446 ~t~L~~A~~~~---------~~~~~~~Ll~~ga~~-------n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~ 509 (602)
+||||+|+..+ ...+.+++++.+++. +..|.+|.||||+|+..|+.+++++|++.+++......
T Consensus 209 ~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a 288 (743)
T TIGR00870 209 NTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVA 288 (743)
T ss_pred hHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeec
Confidence 99999999987 234566666665554 66799999999999999999999999997766655566
Q ss_pred CCCChhhHHHH
Q 038432 510 CEFSSTNLNDM 520 (602)
Q Consensus 510 ~g~t~l~~a~~ 520 (602)
+...|.+++..
T Consensus 289 ~~~~~~~~~~~ 299 (743)
T TIGR00870 289 WPNGQQLLSLY 299 (743)
T ss_pred cCcchHhHhhh
Confidence 66677766544
No 69
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.84 E-value=4.8e-21 Score=170.12 Aligned_cols=127 Identities=16% Similarity=0.191 Sum_probs=108.0
Q ss_pred HHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCC---------CCCcchhHHHHHhcCCH---HHHHHHHHcCCCCCCC
Q 038432 407 IILLDMNGNTALWEAISSKHHSIFRILYHCTAISD---------PYTAGDLLCTAEKRNDM---SVMEELVKYGLNVDSK 474 (602)
Q Consensus 407 ~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~---------~~~g~t~L~~A~~~~~~---~~~~~Ll~~ga~~n~~ 474 (602)
....|..|.||||+|+..|+ +++++...+...+ ...|.||||+|+..|+. +++++|+++|+++|.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 34556889999999999998 4455544333221 26899999999999987 4688999999999999
Q ss_pred C-CCCcCHHHHHHHcCcHHHHHHHHH-CCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccC
Q 038432 475 D-RHGRTAIEIAMAENNVEMVNFLVM-NGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDD 535 (602)
Q Consensus 475 d-~~g~TpLh~A~~~~~~~iv~~Ll~-~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~ 535 (602)
| ..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.++++.|+..++
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8 499999999999999999999998 599999999999999999999999998888876653
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.83 E-value=6e-21 Score=187.27 Aligned_cols=173 Identities=21% Similarity=0.237 Sum_probs=145.0
Q ss_pred CCCCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchh----------
Q 038432 325 EDGDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRD---------- 394 (602)
Q Consensus 325 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~---------- 394 (602)
+..+.+|.|+||.+|...+.+++++|+++|+++|..|..|+||||.|+..|+..++++|+++|+++...+
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~ 146 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLA 146 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccc
Confidence 5578899999999999999999999999999999999999999999999999999999999998876555
Q ss_pred -------hHH-HH--hccchh----------------------HHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC
Q 038432 395 -------YII-FM--YNLSYD----------------------IIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP 442 (602)
Q Consensus 395 -------~~~-~~--~~~~~~----------------------~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~ 442 (602)
... .. .....+ ..+..+..|.|.||.|+.+|..++.++|+++|.+++.
T Consensus 147 e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 147 EDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred cCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc
Confidence 000 00 000010 0112244599999999999999999999999999887
Q ss_pred --CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHH
Q 038432 443 --YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLV 498 (602)
Q Consensus 443 --~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll 498 (602)
.+||||||.|+..|..+++++|+++|++++.....|.||+.+|...-- ..+.+..
T Consensus 227 ~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee~~-~l~eLe~ 283 (527)
T KOG0505|consen 227 KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEEEL-YLLELEL 283 (527)
T ss_pred ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhhhH-HHHHHHH
Confidence 899999999999999999999999999999999999999999976433 4444443
No 71
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=4.1e-21 Score=173.05 Aligned_cols=110 Identities=18% Similarity=0.187 Sum_probs=105.4
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcC
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAEN 489 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~ 489 (602)
..|.+|||+|++.|+..+++.|++.|+.+|. ....||||+|+..|+.++++.|++..+|+|+.|..|+|||||||..|
T Consensus 32 dhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwg 111 (448)
T KOG0195|consen 32 DHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWG 111 (448)
T ss_pred ccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhc
Confidence 8999999999999999999999999999998 55679999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHCCCCcccCCCCCCChhhHHHHH
Q 038432 490 NVEMVNFLVMNGSDVVGANKCEFSSTNLNDML 521 (602)
Q Consensus 490 ~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~ 521 (602)
...+++-|+..||-+++.|++|.||++-|.-.
T Consensus 112 ydqiaedli~~ga~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 112 YDQIAEDLISCGAAVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred HHHHHHHHHhccceeeecccCCCCchhhhchH
Confidence 99999999999999999999999999987543
No 72
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.82 E-value=4.8e-21 Score=199.68 Aligned_cols=209 Identities=19% Similarity=0.198 Sum_probs=124.0
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHH-------HH
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYII-------FM 399 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-------~~ 399 (602)
..++-.|+|..||+.|+.|.+++|+.+|+++..+|..|.+||.+|+-.||..+|+.|+.+.++++...... +-
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 34455677777777777777777777777777777777777777777777777777777766666554000 00
Q ss_pred hccchhHHHH----------hhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC----CCcchhHHHHHhcCCHHHHHHHH
Q 038432 400 YNLSYDIIIL----------LDMNGNTALWEAISSKHHSIFRILYHCTAISDP----YTAGDLLCTAEKRNDMSVMEELV 465 (602)
Q Consensus 400 ~~~~~~~~~~----------~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~----~~g~t~L~~A~~~~~~~~~~~Ll 465 (602)
..+..+++.. ++....|||.+|...|..+++++|+.+|+.+|. +.|..||..|..+|+.+..+.|+
T Consensus 833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll 912 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLL 912 (2131)
T ss_pred CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHh
Confidence 0000000000 013344555555555555555555555555554 34455666666666666666666
Q ss_pred HcCCCCCCC-CCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeeccC
Q 038432 466 KYGLNVDSK-DRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHDD 535 (602)
Q Consensus 466 ~~ga~~n~~-d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~~ 535 (602)
+.|-|+|+. ..+-+|+|-+|+..|..++|.+||.+.+++..+-+.|.|||.-++.-|..++...|+..++
T Consensus 913 ~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~ga 983 (2131)
T KOG4369|consen 913 QPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGA 983 (2131)
T ss_pred cccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccc
Confidence 666665543 2344566666666666666666666666666666667777776666666666666666554
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.80 E-value=3.7e-19 Score=142.05 Aligned_cols=89 Identities=26% Similarity=0.394 Sum_probs=83.9
Q ss_pred HHHHHHcCChhHHHHHHhcCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHH
Q 038432 418 LWEAISSKHHSIFRILYHCTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFL 497 (602)
Q Consensus 418 Lh~A~~~~~~~~~~~Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~L 497 (602)
||+|++.|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~--~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 78 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL--GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLL 78 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS--SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC--CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7999999999999999999998887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCcccCC
Q 038432 498 VMNGSDVVGAN 508 (602)
Q Consensus 498 l~~ga~~~~~d 508 (602)
+++|++++.+|
T Consensus 79 l~~g~~~~~~n 89 (89)
T PF12796_consen 79 LEHGADVNIRN 89 (89)
T ss_dssp HHTTT-TTSS-
T ss_pred HHcCCCCCCcC
Confidence 99999999876
No 74
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.77 E-value=2.8e-19 Score=186.75 Aligned_cols=235 Identities=16% Similarity=0.168 Sum_probs=180.8
Q ss_pred hcccccccccccCCCC--CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCC--CCCCchHHHHHHhcCChHHHHHHHhc
Q 038432 311 KDLNIGDLIAESGEED--GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIG--DSKGRTPLHIAASKGHEECVLVLLKH 386 (602)
Q Consensus 311 ~~~~~~~~l~~~~~~~--~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~--d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 386 (602)
+..+++.+|+..+++. ++-.+.|||-.|...|.+++++.|+..|+.+|.+ ...|-+||++|..+||.+.++.|++.
T Consensus 835 gr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~ 914 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP 914 (2131)
T ss_pred CcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc
Confidence 4445555566555543 4445567777777777777777777777777665 34567777777777777777777777
Q ss_pred ccCCCchh-------hHHHHhccchhHH----------HHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC----CCc
Q 038432 387 ASNVHLRD-------YIIFMYNLSYDII----------ILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP----YTA 445 (602)
Q Consensus 387 g~~~~~~~-------~~~~~~~~~~~~~----------~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~----~~g 445 (602)
|.|+|..- +-.+...+..+++ +.+-+.|.|||+-++..|.+|+-.+|+..|+|+|. ...
T Consensus 915 gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~ 994 (2131)
T KOG4369|consen 915 GSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTW 994 (2131)
T ss_pred cchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcC
Confidence 76666542 0011122222222 22357799999999999999999999999999997 566
Q ss_pred chhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHh
Q 038432 446 GDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKRE 525 (602)
Q Consensus 446 ~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~ 525 (602)
.|+|-+++..|+...+..|+...|.++.+|++|.|+|..|+..|+...+.+|++++||++..|+...|++..|.++|+.+
T Consensus 995 dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~ 1074 (2131)
T KOG4369|consen 995 DTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFA 1074 (2131)
T ss_pred CccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceeeeccCCCchhHHHhh
Q 038432 526 IGHRITVHDDNSTQNEVLLK 545 (602)
Q Consensus 526 ~~~~l~~~~~~~~~~~~~~~ 545 (602)
|+++......-.+....+++
T Consensus 1075 iVk~mv~~atqfps~q~~ir 1094 (2131)
T KOG4369|consen 1075 IVKKMVPPATQFPSVQSTIR 1094 (2131)
T ss_pred eeccccCchhcCCcHHHHHH
Confidence 99998766554444444433
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.75 E-value=2.4e-17 Score=141.01 Aligned_cols=122 Identities=34% Similarity=0.550 Sum_probs=77.9
Q ss_pred CCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCC
Q 038432 360 GDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAI 439 (602)
Q Consensus 360 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~ 439 (602)
.|.+|.||||+|+..|+.+++++|++.|++.+..+ ..|.||||+|+..++.+++++|++.|++
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~-----------------~~g~~~l~~a~~~~~~~~~~~ll~~~~~ 65 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKD-----------------NDGRTPLHLAAKNGHLEIVKLLLEKGAD 65 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccC-----------------CCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 34556666666666666666666666666665554 6666666666666666666666666644
Q ss_pred CCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHH
Q 038432 440 SDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLV 498 (602)
Q Consensus 440 ~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll 498 (602)
++. ..|.||+|.|+..++.+++++|+++|.+++..|..|.||+++|...++.+++++|+
T Consensus 66 ~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 66 VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 433 44556666666666666666666666666666666667777766666666666653
No 76
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.74 E-value=1.1e-17 Score=133.47 Aligned_cols=87 Identities=34% Similarity=0.443 Sum_probs=70.1
Q ss_pred hhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccC
Q 038432 335 LLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNG 414 (602)
Q Consensus 335 L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 414 (602)
||.||+.|+.++++.|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+| ..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-----------------~~g 59 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQD-----------------KNG 59 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS-----------------TTS
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccC-----------------CCC
Confidence 6788888888888888888877766 7888888888888888888888888888877 788
Q ss_pred CcHHHHHHHcCChhHHHHHHhcCCCCCC
Q 038432 415 NTALWEAISSKHHSIFRILYHCTAISDP 442 (602)
Q Consensus 415 ~tpLh~A~~~~~~~~~~~Ll~~g~~~~~ 442 (602)
+||||+|+..|+.+++++|+++|++++.
T Consensus 60 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 60 NTALHYAAENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp SBHHHHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 8888888888888888888777777664
No 77
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.72 E-value=3.5e-17 Score=121.78 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=98.1
Q ss_pred cHHHHHHHcCChhHHHHHHhcCCCCCC-CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHH
Q 038432 416 TALWEAISSKHHSIFRILYHCTAISDP-YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMV 494 (602)
Q Consensus 416 tpLh~A~~~~~~~~~~~Ll~~g~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv 494 (602)
--..+++++|..+-|+-.+..|-++|. ..|++|||+|+..|+.+++++|+..||+++.+|+.|-|||-.|+..||.++|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 346789999999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCcccCCCCCCChhhHHH
Q 038432 495 NFLVMNGSDVVGANKCEFSSTNLND 519 (602)
Q Consensus 495 ~~Ll~~ga~~~~~d~~g~t~l~~a~ 519 (602)
++|+++|||-..+.-+|.+.+..+.
T Consensus 84 klLL~~GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALIEATE 108 (117)
T ss_pred HHHHHcCcccceeCCCchhHHhhcc
Confidence 9999999999999999998888764
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.71 E-value=7.5e-17 Score=137.90 Aligned_cols=120 Identities=23% Similarity=0.355 Sum_probs=111.7
Q ss_pred hccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHc
Q 038432 411 DMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAE 488 (602)
Q Consensus 411 ~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 488 (602)
|..|.||||+|+..|+.+++++|++.|++.+. ..|.||+|.|+..++.+++++|+++|++++..+..|.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 47899999999999999999999999998544 8899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhhhcee
Q 038432 489 NNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRI 530 (602)
Q Consensus 489 ~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l 530 (602)
++.+++++|+++|.+++..|..|.||+++|...++.++++.|
T Consensus 84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 999999999999999999999999999999988777666554
No 79
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=6.5e-17 Score=166.92 Aligned_cols=175 Identities=18% Similarity=0.161 Sum_probs=144.8
Q ss_pred CCCCCCchhhhHhhh---cCcHHHHHHHHhcCCC-CCC----CCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHH
Q 038432 326 DGDPNMSVNLLTVAS---TGNAAFLDELLKARLD-PDI----GDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYII 397 (602)
Q Consensus 326 ~~~~~g~t~L~~A~~---~g~~~~~~~Ll~~g~~-~n~----~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 397 (602)
.+..-|.|.||.|.- .++-++++.|++.-.. +|. ..-.|.||||.|+.+.+.++|++|++.|||++++-+-.
T Consensus 138 ~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~ 217 (782)
T KOG3676|consen 138 ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGA 217 (782)
T ss_pred cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcc
Confidence 346678999999987 4455899999985322 222 13469999999999999999999999999999886433
Q ss_pred HHhccchhHHH-Hh-----hccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCC
Q 038432 398 FMYNLSYDIII-LL-----DMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGL 469 (602)
Q Consensus 398 ~~~~~~~~~~~-~~-----~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga 469 (602)
+....+....+ .. =..|..||-+|+..++.+++++|+++|||++. ..|+|.||..+..-..++..+++++|+
T Consensus 218 FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga 297 (782)
T KOG3676|consen 218 FFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGA 297 (782)
T ss_pred ccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCC
Confidence 33332221110 00 13578999999999999999999999999998 899999999999999999999999999
Q ss_pred C--CCCCCCCCcCHHHHHHHcCcHHHHHHHHHC
Q 038432 470 N--VDSKDRHGRTAIEIAMAENNVEMVNFLVMN 500 (602)
Q Consensus 470 ~--~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ 500 (602)
+ ...+|..|-|||.+||..|+.++.+.+++.
T Consensus 298 ~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 298 NALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred CccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9 889999999999999999999999999987
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.64 E-value=5.2e-16 Score=115.56 Aligned_cols=99 Identities=22% Similarity=0.256 Sum_probs=85.7
Q ss_pred hhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhc
Q 038432 333 VNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDM 412 (602)
Q Consensus 333 t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (602)
..+.+++.+|.++-++.....|.++|..- .|++|||+|+-.|+.+++++|+..||+++.+| +
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kD-----------------K 65 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKD-----------------K 65 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCcc-----------------c
Confidence 45778899999999999999998888765 89999999999999999999999999999998 9
Q ss_pred cCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhH
Q 038432 413 NGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLL 449 (602)
Q Consensus 413 ~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L 449 (602)
.|-|||..|+..||.++|++|++.|++-.. .+|.+.+
T Consensus 66 ygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 66 YGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred cCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHH
Confidence 999999999999999999999988887655 5554443
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.60 E-value=6.3e-15 Score=140.53 Aligned_cols=129 Identities=29% Similarity=0.404 Sum_probs=116.9
Q ss_pred CCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCC-----hhHH
Q 038432 356 DPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKH-----HSIF 430 (602)
Q Consensus 356 ~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~-----~~~~ 430 (602)
..+..+..+.+++|.|+..+..+++++++..|++++..+ ..|.||||+|+..++ .+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----------------~~g~t~l~~a~~~~~~~~~~~~~~ 127 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKD-----------------ADGDTPLHLAALNGNPPEGNIEVA 127 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCccccc-----------------CCCCcHHHHHHhcCCcccchHHHH
Confidence 345567788999999999999999999999999999888 999999999999999 9999
Q ss_pred HHHHhcCC--CCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCC
Q 038432 431 RILYHCTA--ISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNG 501 (602)
Q Consensus 431 ~~Ll~~g~--~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~g 501 (602)
+.|++.|+ +... ..|.||||+|+..|+.+++++|++.|++++.++..|.||++.|+..++.++++.+++.+
T Consensus 128 ~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 128 KLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999 3433 78999999999999999999999999999999999999999999999999999999966
No 82
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.57 E-value=1.7e-15 Score=107.95 Aligned_cols=55 Identities=25% Similarity=0.390 Sum_probs=33.5
Q ss_pred HHHcC-CCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHH
Q 038432 464 LVKYG-LNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLN 518 (602)
Q Consensus 464 Ll~~g-a~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a 518 (602)
|+++| +++|.+|..|+||||+||..|+.+++++|++.|+|++.+|.+|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 57788 99999999999999999999999999999999999999999999999997
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.55 E-value=2.7e-14 Score=136.12 Aligned_cols=125 Identities=29% Similarity=0.359 Sum_probs=117.0
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCC-----hHHHHHHHhccc---CCCchhhHHH
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGH-----EECVLVLLKHAS---NVHLRDYIIF 398 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~-----~~~v~~Ll~~g~---~~~~~~~~~~ 398 (602)
.+..+.+++|.++..++.+.+++++..|++++.+|..|.||||+|+..|+ .+++++|++.|+ +.+..|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~---- 144 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD---- 144 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC----
Confidence 44557899999999999999999999999999999999999999999999 999999999999 555556
Q ss_pred HhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcC
Q 038432 399 MYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYG 468 (602)
Q Consensus 399 ~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~g 468 (602)
..|.||||+|+..|+.+++++|++.|++++. ..|.|+++.|+..++.++++.+++.+
T Consensus 145 -------------~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 145 -------------EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred -------------CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999999999999999999999999999888 89999999999999999999999976
No 84
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.54 E-value=1.9e-13 Score=130.82 Aligned_cols=130 Identities=19% Similarity=0.257 Sum_probs=120.1
Q ss_pred HhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhh
Q 038432 179 LHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVG 258 (602)
Q Consensus 179 ~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ 258 (602)
.++++.+++|..++++.+..+....+.+.|++|++|+++|+.++.+|+|.+|.|+++...++++..+..+.+|++||+.+
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~~ 85 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILAA 85 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhHH
Confidence 35788999999999999999999999999999999999999999999999999999977677788899999999999999
Q ss_pred hhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhh
Q 038432 259 ALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHK 308 (602)
Q Consensus 259 ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~ 308 (602)
++.+.+...++.|.++|.++.++.+.|.+++.++|.....+.+.+..+..
T Consensus 86 ~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~~~~ 135 (236)
T PRK09392 86 VVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRAVVFELAGCYR 135 (236)
T ss_pred HhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988887776655433
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.51 E-value=7.6e-14 Score=151.93 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=98.9
Q ss_pred cHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHH
Q 038432 416 TALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEM 493 (602)
Q Consensus 416 tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~i 493 (602)
++|+.|+..|+.+++++|+++|+++|. ..|.||||+|+..|+.+++++|+++|+|+|.+|.+|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 569999999999999999999999987 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHC-------CCCcccCCCCCCChhhHHH
Q 038432 494 VNFLVMN-------GSDVVGANKCEFSSTNLND 519 (602)
Q Consensus 494 v~~Ll~~-------ga~~~~~d~~g~t~l~~a~ 519 (602)
+++|+++ |++++..+..|.+|+..+.
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999 9999999999998877654
No 86
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=4.6e-14 Score=137.80 Aligned_cols=117 Identities=24% Similarity=0.240 Sum_probs=95.6
Q ss_pred hhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhc
Q 038432 333 VNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDM 412 (602)
Q Consensus 333 t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (602)
-.|..|+..|.+|+|+..+..--|+...+..|-|+||-|+..||.+||++|++.|+|+|..| .
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~D-----------------S 614 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAAD-----------------S 614 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCcc-----------------C
Confidence 34566788888999988888777888888899999999999999999999999999999888 8
Q ss_pred cCCcHHHHHHHcCChhHHHHHHhcCCCCCC---CCcchhHHHHH--hcCCHHHHHHHHH
Q 038432 413 NGNTALWEAISSKHHSIFRILYHCTAISDP---YTAGDLLCTAE--KRNDMSVMEELVK 466 (602)
Q Consensus 413 ~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~---~~g~t~L~~A~--~~~~~~~~~~Ll~ 466 (602)
+||||||+|+.+++..+++.|++.|+-+-. .++.|+..-+- ..|..+|.+||..
T Consensus 615 dGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 615 DGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred CCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 899999999999999999999988887655 66777765543 4567778887763
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=1.7e-13 Score=124.24 Aligned_cols=118 Identities=19% Similarity=0.102 Sum_probs=109.0
Q ss_pred chhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhh
Q 038432 332 SVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLD 411 (602)
Q Consensus 332 ~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~ 411 (602)
..||..++..|+.+....|++.--++|.+|..|.|||..|+..|+.+.|++|++.|+|+|... +
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~q----------------h 76 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQ----------------H 76 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccc----------------c
Confidence 678999999999999999999877799999999999999999999999999999999999876 5
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHH
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELV 465 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll 465 (602)
..+.||||+|+.+|+.++.++|++.|+.... .-|+|+-..|+.-|+.++|..+-
T Consensus 77 g~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 77 GTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred cccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 7789999999999999999999999998776 77999999999999988887664
No 88
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.47 E-value=1e-13 Score=98.41 Aligned_cols=54 Identities=24% Similarity=0.520 Sum_probs=43.3
Q ss_pred cchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHH
Q 038432 445 AGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLV 498 (602)
Q Consensus 445 g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll 498 (602)
|.||||.|+..|+.+++++|+++|+|+|.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678888888888899999999999999999999999999999999999999986
No 89
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.47 E-value=4.4e-14 Score=100.63 Aligned_cols=55 Identities=40% Similarity=0.566 Sum_probs=33.3
Q ss_pred HHhcC-CCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHH
Q 038432 350 LLKAR-LDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEA 421 (602)
Q Consensus 350 Ll~~g-~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A 421 (602)
|++.| +++|.+|..|.||||+||..|+.++|++|++.|+|++.+| ..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d-----------------~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKD-----------------KDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT--------------------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCc-----------------CCCCCHHHhC
Confidence 56777 8999999999999999999999999999999999999998 9999999997
No 90
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.45 E-value=3.1e-13 Score=147.21 Aligned_cols=104 Identities=22% Similarity=0.213 Sum_probs=97.4
Q ss_pred hHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--C
Q 038432 366 TPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--Y 443 (602)
Q Consensus 366 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~ 443 (602)
++|+.|+..|+.++++.|+++|+++|..| ..|.||||+|+..|+.+++++|+++|++++. .
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d-----------------~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~ 146 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRD-----------------YDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------------CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 35889999999999999999999999998 9999999999999999999999999999987 7
Q ss_pred CcchhHHHHHhcCCHHHHHHHHHc-------CCCCCCCCCCCcCHHHHHH
Q 038432 444 TAGDLLCTAEKRNDMSVMEELVKY-------GLNVDSKDRHGRTAIEIAM 486 (602)
Q Consensus 444 ~g~t~L~~A~~~~~~~~~~~Ll~~-------ga~~n~~d~~g~TpLh~A~ 486 (602)
.|.||||+|+..|+.+++++|+++ |++++..+..|.+|+..+.
T Consensus 147 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 147 DGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred CCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 899999999999999999999999 8999999998888877665
No 91
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.44 E-value=2e-13 Score=96.86 Aligned_cols=54 Identities=39% Similarity=0.596 Sum_probs=46.5
Q ss_pred CchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHH
Q 038432 364 GRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILY 434 (602)
Q Consensus 364 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll 434 (602)
|+||||+||..|+.+++++|+++|+|+|..| .+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d-----------------~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQD-----------------EDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B------------------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-----------------CCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999999999998 99999999999999999999986
No 92
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.42 E-value=8.7e-13 Score=119.65 Aligned_cols=117 Identities=25% Similarity=0.235 Sum_probs=89.4
Q ss_pred CchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC-
Q 038432 364 GRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP- 442 (602)
Q Consensus 364 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~- 442 (602)
-..||.-++-.|..+-...|++.--++|..| ..|.|||..|+..|+.+++++|++.|+|+|.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D-----------------~sGMs~LahAaykGnl~~v~lll~~gaDvN~~ 74 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRD-----------------PSGMSVLAHAAYKGNLTLVELLLELGADVNDK 74 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccC-----------------CCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc
Confidence 3568888888888888888887766677776 8888888888888888888888888888876
Q ss_pred --CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHH
Q 038432 443 --YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFL 497 (602)
Q Consensus 443 --~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~L 497 (602)
..+.||||.|+..|+.++..+|++.|+.....|+-|+|+-.+|+.-|+-++|..+
T Consensus 75 qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 75 QHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII 131 (396)
T ss_pred cccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence 4556777777777777777777777777777777777777777777776666554
No 93
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.38 E-value=8.1e-12 Score=104.62 Aligned_cols=112 Identities=32% Similarity=0.445 Sum_probs=102.6
Q ss_pred ccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEecc-CceeEEEEeCCCCeeehhhhhcCCCc
Q 038432 187 LFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEM-EKEIAVGTLQTGDMFGEVGALCCRPQ 265 (602)
Q Consensus 187 ~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~-~~~~~~~~l~~g~~fGe~~ll~~~~~ 265 (602)
+|..++++.+..+...++.+.+.+|++|+.+|+..+.+|+|.+|.+.+..... +++..+..+.+|++||...++.+.+.
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPR 80 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCC
Confidence 47889999999999999999999999999999999999999999999987544 36788899999999999999988889
Q ss_pred eeEEEEcceeEEEEeeHHHHHHHHHhChHHHHH
Q 038432 266 IYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVS 298 (602)
Q Consensus 266 ~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~ 298 (602)
..++.+.+.+.++.++.+.+.+++.++|.....
T Consensus 81 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~ 113 (115)
T cd00038 81 SATVRALTDSELLVLPRSDFRRLLQEYPELARR 113 (115)
T ss_pred CceEEEcCceEEEEEeHHHHHHHHHHCcHhHHh
Confidence 999999999999999999999999999976543
No 94
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=9e-13 Score=128.89 Aligned_cols=101 Identities=20% Similarity=0.204 Sum_probs=90.3
Q ss_pred HHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHH
Q 038432 418 LWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVN 495 (602)
Q Consensus 418 Lh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~ 495 (602)
|.-|+..|..++|+-.+..-.|+.. ..|.|+||-|+..|+.+||++|++.|+|+|+.|++||||||+|+..++..+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 3557788999999999988888776 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCcccCC-CCCCChhhHH
Q 038432 496 FLVMNGSDVVGAN-KCEFSSTNLN 518 (602)
Q Consensus 496 ~Ll~~ga~~~~~d-~~g~t~l~~a 518 (602)
.|++.||-+.+.. .++.||.+-+
T Consensus 634 qLVe~GaavfAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 634 QLVESGAAVFASTLSDMETAAEKC 657 (752)
T ss_pred HHHhccceEEeeecccccchhhhc
Confidence 9999999886654 4677887654
No 95
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.36 E-value=2.5e-11 Score=114.04 Aligned_cols=119 Identities=18% Similarity=0.288 Sum_probs=107.0
Q ss_pred ccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCC-Cce
Q 038432 189 KDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCR-PQI 266 (602)
Q Consensus 189 ~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~-~~~ 266 (602)
+.+|++.+..+...++.+.|++|++|+.+|++++.+|+|.+|.++++... ++++..+..+.+|++||+.+++.+. +.+
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~ 85 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERS 85 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCce
Confidence 35799999999999999999999999999999999999999999998654 4678889999999999999988864 677
Q ss_pred eEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhh
Q 038432 267 YTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQH 307 (602)
Q Consensus 267 ~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~ 307 (602)
.+++|.++|.++.++.+.|.+++..+|+....+.+.+..+.
T Consensus 86 ~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l 126 (211)
T PRK11753 86 AWVRAKTACEVAEISYKKFRQLIQVNPDILMALSAQMARRL 126 (211)
T ss_pred EEEEEcCcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999887777665554
No 96
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.36 E-value=1.6e-12 Score=122.24 Aligned_cols=130 Identities=22% Similarity=0.321 Sum_probs=116.5
Q ss_pred hHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehh
Q 038432 178 FLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEV 257 (602)
Q Consensus 178 ~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~ 257 (602)
....+++.-+|++++++.++.+...+....+..|+.|+.||+.++.+|+|.+|+++|+.. ...+..+.+|..|||.
T Consensus 120 L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~----~~~v~~~~~g~sFGEl 195 (368)
T KOG1113|consen 120 LEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVN----GTYVTTYSPGGSFGEL 195 (368)
T ss_pred HHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEEC----CeEEeeeCCCCchhhh
Confidence 345677888999999999999999999999999999999999999999999999999975 3478899999999999
Q ss_pred hhhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhhhh
Q 038432 258 GALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHKKLK 311 (602)
Q Consensus 258 ~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~~~ 311 (602)
+++.+.|+.+|+.+.+.+.+|.+++..|.+++..+.....+++..+++....+.
T Consensus 196 ALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~ 249 (368)
T KOG1113|consen 196 ALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILE 249 (368)
T ss_pred HhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhH
Confidence 999999999999999999999999999999988888777777777666544444
No 97
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.31 E-value=5.1e-11 Score=100.46 Aligned_cols=115 Identities=30% Similarity=0.427 Sum_probs=101.8
Q ss_pred ccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhh--cCC
Q 038432 187 LFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGAL--CCR 263 (602)
Q Consensus 187 ~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll--~~~ 263 (602)
+|.++++..+..++..++.+.|.+|++|+++|++.+.+|+|.+|.++++..+ ++++..+..+.+|++||+.+++ ...
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSRR 80 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCCc
Confidence 4788999999999999999999999999999999999999999999999753 4467789999999999999988 345
Q ss_pred CceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHH
Q 038432 264 PQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILK 301 (602)
Q Consensus 264 ~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~ 301 (602)
+...++.+.+.+.++.++...+...+..++......+.
T Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 118 (120)
T smart00100 81 AASATAVALELATLLRIDFRDFLQLLQENPQLLLELLL 118 (120)
T ss_pred ccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHHHHh
Confidence 67788999999999999999999999998887655443
No 98
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.31 E-value=6e-11 Score=118.65 Aligned_cols=127 Identities=17% Similarity=0.199 Sum_probs=117.2
Q ss_pred HhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhh
Q 038432 179 LHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVG 258 (602)
Q Consensus 179 ~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ 258 (602)
.++++++|.|+.++++.+..|...++..+|++||+|+..|.+...+|+|.+|.|+++..++ .++..+..||.||..+
T Consensus 6 ~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g---~v~~~~~~gdlFg~~~ 82 (610)
T COG2905 6 DQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGG---EVLDRLAAGDLFGFSS 82 (610)
T ss_pred HHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCC---eeeeeeccCccccchh
Confidence 4789999999999999999999999999999999999999999999999999999997666 4899999999999999
Q ss_pred hhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhh
Q 038432 259 ALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHK 308 (602)
Q Consensus 259 ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~ 308 (602)
+++..+....+.+.+++-++.|+++.|.+++.++|.....+...+..+.+
T Consensus 83 l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR~~ 132 (610)
T COG2905 83 LFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKRLR 132 (610)
T ss_pred hcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 99999888889999999999999999999999999998887766655544
No 99
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.31 E-value=2.1e-11 Score=97.57 Aligned_cols=89 Identities=29% Similarity=0.440 Sum_probs=82.9
Q ss_pred eecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCc-eeEEEEeCCCCeeehhhhhcCCCceeEEEEcceeEEEEeeHHH
Q 038432 206 EYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEK-EIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTLSQLLRLKTSA 284 (602)
Q Consensus 206 ~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~-~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~ 284 (602)
+.|++|++|+++|+..+.+|||.+|.++++....+. ...+..+.+|++||+.+++.+.++..+++|.+.+.++.++++.
T Consensus 2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 81 (91)
T PF00027_consen 2 KTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIALTDSEVLRIPRED 81 (91)
T ss_dssp EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEESSSEEEEEEEHHH
T ss_pred eEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEEccCEEEEEEeHHH
Confidence 679999999999999999999999999999876654 4568999999999999999999999999999999999999999
Q ss_pred HHHHHHhChH
Q 038432 285 LIEAMQSKQE 294 (602)
Q Consensus 285 ~~~~l~~~~~ 294 (602)
|.++++++|+
T Consensus 82 ~~~~~~~~p~ 91 (91)
T PF00027_consen 82 FLQLLQQDPE 91 (91)
T ss_dssp HHHHHHHSHH
T ss_pred HHHHHHhCcC
Confidence 9999999985
No 100
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=7.5e-12 Score=123.15 Aligned_cols=121 Identities=21% Similarity=0.348 Sum_probs=108.5
Q ss_pred HHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccC--ceeEEEEeCCCC
Q 038432 175 QHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEME--KEIAVGTLQTGD 252 (602)
Q Consensus 175 ~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~--~~~~~~~l~~g~ 252 (602)
.+-++++|+.+|+|+++|++.+.+++..++..+|..|++|+++|+.++.+|+|.+|+|.+.....+ .+..++.++.||
T Consensus 267 ~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd 346 (732)
T KOG0614|consen 267 HEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGD 346 (732)
T ss_pred HHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccc
Confidence 456778999999999999999999999999999999999999999999999999999999876544 567789999999
Q ss_pred eeehhhhhcCCCceeEEEEcce-eEEEEeeHHHHHHHHHhChHH
Q 038432 253 MFGEVGALCCRPQIYTYRTKTL-SQLLRLKTSALIEAMQSKQED 295 (602)
Q Consensus 253 ~fGe~~ll~~~~~~~tv~a~~~-~~l~~l~~~~~~~~l~~~~~~ 295 (602)
+|||.+++....|++.+.+... .+++.++++.|.+++-...+.
T Consensus 347 ~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l 390 (732)
T KOG0614|consen 347 YFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEEL 390 (732)
T ss_pred hhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHh
Confidence 9999999999999999998887 899999999998876544433
No 101
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.27 E-value=4.9e-11 Score=112.99 Aligned_cols=111 Identities=10% Similarity=0.043 Sum_probs=99.9
Q ss_pred HHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCCCceeEEEEcce
Q 038432 196 IVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTL 274 (602)
Q Consensus 196 l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~ 274 (602)
...+....+.+.|++|++|+.+||+++.+|+|.+|.|+++..+ +|++.++..+.+|++||+.+++.+.+.+.++.|.++
T Consensus 24 ~~~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~~~ 103 (226)
T PRK10402 24 SFDVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQAIEE 103 (226)
T ss_pred CHHHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEEecc
Confidence 3467788889999999999999999999999999999998654 557888999999999999999999999999999999
Q ss_pred eEEEEeeHHHHHHHHHhChHHHHHHHHHHHHh
Q 038432 275 SQLLRLKTSALIEAMQSKQEDNVSILKNFLQQ 306 (602)
Q Consensus 275 ~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~ 306 (602)
+.++.++.+.|.+++..+|.....+++.+..+
T Consensus 104 ~~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~~ 135 (226)
T PRK10402 104 CWCLALPMKDCRPLLLNDALFLRKLCKFLSHK 135 (226)
T ss_pred EEEEEEEHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999888777766554
No 102
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=99.24 E-value=7.4e-11 Score=91.00 Aligned_cols=77 Identities=31% Similarity=0.613 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFN 94 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g 94 (602)
++++.++.||+++.+.+. .. ...|.+|+||+++|+||+||||+.|.+..+++++++.+++|
T Consensus 2 ~~~~~l~~~~~~~~~~~~----~~---------------~~~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~G 62 (79)
T PF07885_consen 2 ILLLVLAFGAIFFYISEG----SE---------------KWSFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLIG 62 (79)
T ss_dssp HHHHHHHHHHHHHHHTTS----SS---------------TTSHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHHH
T ss_pred EEEeeeHHHHHHHHHHHh----cc---------------cCCHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHHH
Confidence 467788889999887110 01 12588999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 038432 95 LGLTAYLIGNMTNLVV 110 (602)
Q Consensus 95 ~~~~~~~i~~i~~~~~ 110 (602)
..++++.++.+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~l~ 78 (79)
T PF07885_consen 63 IFLFALFLSVLASVLT 78 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988764
No 103
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1.7e-11 Score=120.69 Aligned_cols=137 Identities=19% Similarity=0.247 Sum_probs=119.9
Q ss_pred HHHHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCC
Q 038432 173 ICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGD 252 (602)
Q Consensus 173 v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~ 252 (602)
-...+.++-+.+..|++++....+.+|+.+|.+..|++|+.|+++|++++.+|++.+|+++|... +..+..+++|.
T Consensus 147 ~~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~----g~ll~~m~~gt 222 (732)
T KOG0614|consen 147 GAKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSRE----GKLLGKMGAGT 222 (732)
T ss_pred cHHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEeeC----CeeeeccCCch
Confidence 34566778888899999999999999999999999999999999999999999999999999873 36899999999
Q ss_pred eeehhhhhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhhhhcc
Q 038432 253 MFGEVGALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHKKLKDL 313 (602)
Q Consensus 253 ~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~~~~~ 313 (602)
.|||.+++.+.+|++++++.+.+.+|.|+++.|+.++.........-..+++.....+.++
T Consensus 223 vFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l 283 (732)
T KOG0614|consen 223 VFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNL 283 (732)
T ss_pred hhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 9999999999999999999999999999999999998877666665556665555444433
No 104
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.23 E-value=2.4e-10 Score=107.66 Aligned_cols=127 Identities=24% Similarity=0.402 Sum_probs=109.4
Q ss_pred hhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEecc-CceeEEEEeCCCCeeehhhhhc
Q 038432 183 EKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEM-EKEIAVGTLQTGDMFGEVGALC 261 (602)
Q Consensus 183 ~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~-~~~~~~~~l~~g~~fGe~~ll~ 261 (602)
...+.|...+......+......+.+++|++|+.+||+++.+|+|.+|.++++.... +++..+..+++|++||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~ 82 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLG 82 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhc
Confidence 345666667888888887888999999999999999999999999999999997554 5788899999999999999999
Q ss_pred CCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhh
Q 038432 262 CRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHKK 309 (602)
Q Consensus 262 ~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~ 309 (602)
+.+++.++++.+++.++.+++..|.+++...|.....++..+..+...
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~l~~ 130 (214)
T COG0664 83 GDPRSASAVALTDVEVLEIPRKDFLELLAESPKLALALLRLLARRLRQ 130 (214)
T ss_pred CCCccceEEEcceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999998777777777776665555443
No 105
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.21 E-value=3.5e-10 Score=108.10 Aligned_cols=126 Identities=12% Similarity=0.092 Sum_probs=106.7
Q ss_pred hhhhcccccCCHHHHHHHHHhccc-eecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhh
Q 038432 182 VEKVYLFKDVSKEIIVLLVAKMKA-EYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGA 259 (602)
Q Consensus 182 l~~~~~f~~~s~~~l~~l~~~~~~-~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~l 259 (602)
+++.+.|..++++.+..|...... ..|++|++|+.+||+++.+|+|.+|.|+++..+ ++++.++..+.+|++||+.++
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~ 94 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 94 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccc
Confidence 445555557999999999988864 679999999999999999999999999999754 457888889999999998776
Q ss_pred hcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhh
Q 038432 260 LCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHK 308 (602)
Q Consensus 260 l~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~ 308 (602)
+. .+.+.++.+.+++.++.++.+.|.+++..+|+....+++.+..+..
T Consensus 95 ~~-~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~~~ 142 (235)
T PRK11161 95 GS-GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGEIK 142 (235)
T ss_pred cC-CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 54 4455688999999999999999999999999998888777655443
No 106
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.20 E-value=1.7e-10 Score=119.12 Aligned_cols=113 Identities=17% Similarity=0.092 Sum_probs=101.6
Q ss_pred HhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhh
Q 038432 179 LHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVG 258 (602)
Q Consensus 179 ~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ 258 (602)
.++++++++|++++++.+..+...++.+.|++|++|+++||..+.+|+|.+|.|+++....+.+..+..+++|++||+.
T Consensus 7 ~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~ge~~l~~l~~Gd~fG~~- 85 (413)
T PLN02868 7 VEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFLLKRYDYFGYG- 85 (413)
T ss_pred HHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCCcEEEEEeCCCCEeehh-
Confidence 3567899999999999999999999999999999999999999999999999999998665556788899999999975
Q ss_pred hhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhCh
Q 038432 259 ALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQ 293 (602)
Q Consensus 259 ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~ 293 (602)
+.+.++..++++.+.++++.++.+.|..+....+
T Consensus 86 -l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~ 119 (413)
T PLN02868 86 -LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSI 119 (413)
T ss_pred -hCCCCcccEEEECCCEEEEEEcHHHHhhhccccc
Confidence 6788899999999999999999999987655443
No 107
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=99.16 E-value=2.9e-11 Score=119.46 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhh
Q 038432 54 WIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVG 131 (602)
Q Consensus 54 ~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~ 131 (602)
+++-..++|||++|||||||||++|.|..+++++...++.|++..|+.|..|.+-+...++..++.++..+.-...+.
T Consensus 375 FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlAlPItiIv~nF~~~y~~~k~~~~~~~~~~~~~~ 452 (477)
T KOG3713|consen 375 FTSIPAGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLALPITIIVNNFSMYYSELKAREKAPKRREALEP 452 (477)
T ss_pred CccccchhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhhcchHhHhhhHHHHHHHHHHHHHhhhhhccccc
Confidence 444557999999999999999999999999999999999999999999999998888877766666655544444433
No 108
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.01 E-value=4.1e-09 Score=97.46 Aligned_cols=99 Identities=16% Similarity=0.300 Sum_probs=87.1
Q ss_pred CCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCCCc--eeEEEEcceeEEEEeeHHHHHH
Q 038432 211 REDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCRPQ--IYTYRTKTLSQLLRLKTSALIE 287 (602)
Q Consensus 211 g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~~~--~~tv~a~~~~~l~~l~~~~~~~ 287 (602)
|++|+.+||+.+.+|+|.+|.|+++... ++++..+..+.+|++||+.+++.+.+. ..++.|.+++.++.++.+.|.+
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~ 80 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPIEQVEK 80 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCccceEEEEecceEEEEeeHHHHHH
Confidence 7899999999999999999999999754 457888999999999999999987653 4789999999999999999999
Q ss_pred HHHhChHHHHHHHHHHHHhhhh
Q 038432 288 AMQSKQEDNVSILKNFLQQHKK 309 (602)
Q Consensus 288 ~l~~~~~~~~~il~~ll~~~~~ 309 (602)
++..+|.....+++.+..+...
T Consensus 81 l~~~~p~l~~~~~~~l~~~l~~ 102 (193)
T TIGR03697 81 AIEEDPDLSMLLLQGLSSRILQ 102 (193)
T ss_pred HHHHChHHHHHHHHHHHHHHHH
Confidence 9999999998888876655433
No 109
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.99 E-value=8.4e-10 Score=109.50 Aligned_cols=61 Identities=21% Similarity=0.441 Sum_probs=56.2
Q ss_pred CCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038432 50 ETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVV 110 (602)
Q Consensus 50 ~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~ 110 (602)
....+..|.+|+||+++|+||+||||.+|+|...++++..+.++|+.+||..-|.+++-+.
T Consensus 263 ~n~~F~TyADALWWG~ITltTIGYGDk~P~TWlGr~laa~fsligiSFFALPAGILGSGfA 323 (654)
T KOG1419|consen 263 TNDEFPTYADALWWGVITLTTIGYGDKTPQTWLGRLLAACFSLIGISFFALPAGILGSGFA 323 (654)
T ss_pred ccccchhHHHHHHhhheeEEeeccCCcCcccchhHHHHHHHHHHHHHHHhcccccccchhh
Confidence 3456889999999999999999999999999999999999999999999999998877554
No 110
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=98.97 E-value=9.4e-09 Score=97.56 Aligned_cols=109 Identities=16% Similarity=0.093 Sum_probs=93.7
Q ss_pred HHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCCCceeEEEEcceeE
Q 038432 198 LLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTLSQ 276 (602)
Q Consensus 198 ~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~~~ 276 (602)
.+......+.|++|++|+.+||.++.+|||.+|.|+++... ++++.++..+.+|++||+. .+.+...++.+.+++.
T Consensus 33 ~~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A~~ds~ 109 (230)
T PRK09391 33 HAGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHRFTAEAIVDTT 109 (230)
T ss_pred cccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCCeEEEEcCceE
Confidence 45566678999999999999999999999999999999754 4567788899999999964 4566789999999999
Q ss_pred EEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhh
Q 038432 277 LLRLKTSALIEAMQSKQEDNVSILKNFLQQHKK 309 (602)
Q Consensus 277 l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~ 309 (602)
++.++.+.|.+++..+|+....+++.+..+...
T Consensus 110 v~~i~~~~f~~l~~~~p~l~~~l~~~l~~~l~~ 142 (230)
T PRK09391 110 VRLIKRRSLEQAAATDVDVARALLSLTAGGLRH 142 (230)
T ss_pred EEEEEHHHHHHHHhhChHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888776655443
No 111
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=98.97 E-value=1.3e-09 Score=102.88 Aligned_cols=118 Identities=22% Similarity=0.309 Sum_probs=108.3
Q ss_pred HHhhHhhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCee
Q 038432 175 QHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMF 254 (602)
Q Consensus 175 ~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~f 254 (602)
..++.++|+++|+++.|.......++..+.+..|.+|+.|+.+|+.++.+|+|.+|+|.+....++ ..+ .++.|++|
T Consensus 235 rkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~--v~v-kl~~~dyf 311 (368)
T KOG1113|consen 235 RKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDG--VEV-KLKKGDYF 311 (368)
T ss_pred hhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhccCC--eEE-Eechhhhc
Confidence 457888999999999999999999999999999999999999999999999999999999865533 556 99999999
Q ss_pred ehhhhhcCCCceeEEEEcceeEEEEeeHHHHHHHHHhChHH
Q 038432 255 GEVGALCCRPQIYTYRTKTLSQLLRLKTSALIEAMQSKQED 295 (602)
Q Consensus 255 Ge~~ll~~~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~ 295 (602)
|+.+++.+.++.+++.+.+...+..+++..|..++....+.
T Consensus 312 ge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc~di 352 (368)
T KOG1113|consen 312 GELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPCQDI 352 (368)
T ss_pred chHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999888766543
No 112
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.96 E-value=9.7e-10 Score=107.19 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=74.2
Q ss_pred HHHHHHHcCChhHHHHHHhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHH
Q 038432 417 ALWEAISSKHHSIFRILYHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEM 493 (602)
Q Consensus 417 pLh~A~~~~~~~~~~~Ll~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~i 493 (602)
-||-+++.|+.++.--|+..||++|. ..|.||||.|++.|+..-+++|+-+|||+++.|.+|+||+.+|-..||-++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 47888888888888888888888887 678888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHCCCCc
Q 038432 494 VNFLVMNGSDV 504 (602)
Q Consensus 494 v~~Ll~~ga~~ 504 (602)
.+-|++.-.++
T Consensus 216 aeRl~e~~y~v 226 (669)
T KOG0818|consen 216 AERLVEIQYEL 226 (669)
T ss_pred HHHHHHHHHHH
Confidence 88888765444
No 113
>PF13606 Ank_3: Ankyrin repeat
Probab=98.94 E-value=1.1e-09 Score=66.13 Aligned_cols=30 Identities=33% Similarity=0.694 Sum_probs=24.7
Q ss_pred CCcCHHHHHHHcCcHHHHHHHHHCCCCccc
Q 038432 477 HGRTAIEIAMAENNVEMVNFLVMNGSDVVG 506 (602)
Q Consensus 477 ~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~ 506 (602)
+|+||||+||..|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888863
No 114
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.90 E-value=2e-09 Score=67.19 Aligned_cols=33 Identities=21% Similarity=0.481 Sum_probs=28.5
Q ss_pred CCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCC
Q 038432 477 HGRTAIEIAMAENNVEMVNFLVMNGSDVVGANK 509 (602)
Q Consensus 477 ~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~ 509 (602)
+|+||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 588899999999999999999999999888774
No 115
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=98.90 E-value=2e-08 Score=93.50 Aligned_cols=98 Identities=17% Similarity=0.278 Sum_probs=80.6
Q ss_pred hccceecCCCCeEEccCC--CCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCCCceeEEEEcceeEEE
Q 038432 202 KMKAEYIPPREDVIMQNE--APDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTLSQLL 278 (602)
Q Consensus 202 ~~~~~~~~~g~~i~~~g~--~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~~~l~ 278 (602)
.++...|++|++|+.+|| +++.+|+|.+|.|+++... +|++.++..+.+|++||+.+++ +.+++.++.|.+++.++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~-~~~~~~~~~A~~~~~v~ 83 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALA-GAERAYFAEAVTDSRID 83 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhc-CCCCCceEEEcCceEEE
Confidence 456788999999999999 7799999999999998754 5688899999999999997654 57788999999999999
Q ss_pred EeeHHHHHHHHHhChHHHHHHHHHHHHh
Q 038432 279 RLKTSALIEAMQSKQEDNVSILKNFLQQ 306 (602)
Q Consensus 279 ~l~~~~~~~~l~~~~~~~~~il~~ll~~ 306 (602)
.++...+ .|.....+++.+...
T Consensus 84 ~i~~~~~------~~~~~~~l~~~l~~~ 105 (202)
T PRK13918 84 VLNPALM------SAEDNLVLTQHLVRT 105 (202)
T ss_pred EEEHHHc------ChhhHHHHHHHHHHH
Confidence 9999876 345555555554433
No 116
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.90 E-value=7.6e-10 Score=114.32 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=57.8
Q ss_pred CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCC-CCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHH
Q 038432 443 YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDR-HGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDML 521 (602)
Q Consensus 443 ~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~-~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~ 521 (602)
..|+|+||+|+..|..+++++|+++|+|++.+|. .|+||||-|+..|+.+++-+||++|+.+.++|++|.+||++.++.
T Consensus 50 ~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 50 RYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred hhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhhc
Confidence 5566666666666666777777777777777774 577777777777777777777777777777777777777776653
No 117
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.88 E-value=1e-09 Score=106.57 Aligned_cols=90 Identities=22% Similarity=0.309 Sum_probs=84.6
Q ss_pred cchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHC-CCCcccCCCCCCChhhHHHHHHH
Q 038432 445 AGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMN-GSDVVGANKCEFSSTNLNDMLQK 523 (602)
Q Consensus 445 g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~-ga~~~~~d~~g~t~l~~a~~~~~ 523 (602)
+..++.+|++.|+...++.+.-.|.|++.+|.+.+|+||.||..|+.+++++|++. +.|++.+|.+|+|||+-|...++
T Consensus 506 ~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h 585 (622)
T KOG0506|consen 506 TVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH 585 (622)
T ss_pred chhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence 34579999999999999999999999999999999999999999999999999985 99999999999999999999999
Q ss_pred Hhhhceeeecc
Q 038432 524 REIGHRITVHD 534 (602)
Q Consensus 524 ~~~~~~l~~~~ 534 (602)
.+++++|....
T Consensus 586 ~~v~k~L~~~~ 596 (622)
T KOG0506|consen 586 KEVVKLLEEAQ 596 (622)
T ss_pred HHHHHHHHHHh
Confidence 99999887664
No 118
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.87 E-value=2.5e-09 Score=103.91 Aligned_cols=95 Identities=27% Similarity=0.386 Sum_probs=87.6
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhc-ccCCCchhhHHHHhccchh
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKH-ASNVHLRDYIIFMYNLSYD 405 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~ 405 (602)
++.++..++++|+..|++..++.+.-.|.|++.+|.+.+|+||+|+..|+.+++++|++. +.|++.+|
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kD----------- 570 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKD----------- 570 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhh-----------
Confidence 345567789999999999999999999999999999999999999999999999999985 89999998
Q ss_pred HHHHhhccCCcHHHHHHHcCChhHHHHHHhcCC
Q 038432 406 IIILLDMNGNTALWEAISSKHHSIFRILYHCTA 438 (602)
Q Consensus 406 ~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~ 438 (602)
..|+|||.-|...+|.+++++|-+.-.
T Consensus 571 ------Rw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 571 ------RWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred ------ccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 999999999999999999999976543
No 119
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.87 E-value=6.9e-09 Score=101.36 Aligned_cols=87 Identities=13% Similarity=0.239 Sum_probs=80.8
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHhh
Q 038432 448 LLCTAEKRNDMSVMEELVKYGLNVDSKD-RHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKREI 526 (602)
Q Consensus 448 ~L~~A~~~~~~~~~~~Ll~~ga~~n~~d-~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~ 526 (602)
-||.+++.|+.++.-.|+..||++|..+ ..|.||||.|++.|+.--+++|+-+|||++..|.+|.||+++|...|+.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 4899999999999999999999999876 479999999999999999999999999999999999999999999999998
Q ss_pred hceeeecc
Q 038432 527 GHRITVHD 534 (602)
Q Consensus 527 ~~~l~~~~ 534 (602)
++.|.+..
T Consensus 216 aeRl~e~~ 223 (669)
T KOG0818|consen 216 AERLVEIQ 223 (669)
T ss_pred HHHHHHHH
Confidence 88776543
No 120
>PF13606 Ank_3: Ankyrin repeat
Probab=98.85 E-value=2.7e-09 Score=64.41 Aligned_cols=30 Identities=50% Similarity=0.762 Sum_probs=25.8
Q ss_pred CCchHHHHHHhcCChHHHHHHHhcccCCCc
Q 038432 363 KGRTPLHIAASKGHEECVLVLLKHASNVHL 392 (602)
Q Consensus 363 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 392 (602)
+|+||||+||+.|+.++|++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 588899999999999999999998888873
No 121
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.78 E-value=4.9e-09 Score=108.51 Aligned_cols=85 Identities=20% Similarity=0.173 Sum_probs=78.1
Q ss_pred hHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC---CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCH
Q 038432 405 DIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP---YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTA 481 (602)
Q Consensus 405 ~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~Tp 481 (602)
...+.+|..|+|+||+|+..+..+++++|+++|+|++. ..|+||||-|+.+|+.+++-.|+.+|+....+|++|.+|
T Consensus 43 n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsp 122 (1267)
T KOG0783|consen 43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSP 122 (1267)
T ss_pred hhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCH
Confidence 33445569999999999999999999999999999976 789999999999999999999999999999999999999
Q ss_pred HHHHHHcC
Q 038432 482 IEIAMAEN 489 (602)
Q Consensus 482 Lh~A~~~~ 489 (602)
|..-++-.
T Consensus 123 lq~~~r~~ 130 (1267)
T KOG0783|consen 123 LQFLSRVL 130 (1267)
T ss_pred HHHHhhcc
Confidence 99988743
No 122
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.72 E-value=1.4e-08 Score=63.42 Aligned_cols=32 Identities=50% Similarity=0.883 Sum_probs=28.9
Q ss_pred CCchHHHHHHhcCChHHHHHHHhcccCCCchh
Q 038432 363 KGRTPLHIAASKGHEECVLVLLKHASNVHLRD 394 (602)
Q Consensus 363 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~ 394 (602)
+|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 58999999999999999999999999998875
No 123
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.69 E-value=2.4e-08 Score=99.11 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=92.7
Q ss_pred HHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCC--CCCCCCCCcCHHHHHHHcCcHHHHH
Q 038432 420 EAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLN--VDSKDRHGRTAIEIAMAENNVEMVN 495 (602)
Q Consensus 420 ~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~--~n~~d~~g~TpLh~A~~~~~~~iv~ 495 (602)
.|+..++.--++-+-.+|.+.-. .+..+.||+|++.|+-++|+|++++|.. .+..|..|.|+||-|+..++..+.+
T Consensus 872 ~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~ 951 (1004)
T KOG0782|consen 872 RAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQ 951 (1004)
T ss_pred HHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHH
Confidence 34444443323333334443322 6678899999999999999999999964 5778899999999999999999999
Q ss_pred HHHHCCCCcccCCCCCCChhhHHHHHHHHhhhceeeecc
Q 038432 496 FLVMNGSDVVGANKCEFSSTNLNDMLQKREIGHRITVHD 534 (602)
Q Consensus 496 ~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~l~~~~ 534 (602)
+|++.||.+...|..|.||-.-|...++.+.+.+|..+.
T Consensus 952 ~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 952 LLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 999999999999999999999999999988888877654
No 124
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.68 E-value=6.9e-08 Score=95.88 Aligned_cols=89 Identities=18% Similarity=0.188 Sum_probs=82.6
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCC----CCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHH
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTA----ISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMA 487 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~ 487 (602)
.+..|-||+|+..|+-++|++++++|. |.-...|.|+||.|+..++..++++|++.||.....|..|.||-.-|-+
T Consensus 897 ~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqq 976 (1004)
T KOG0782|consen 897 PDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQ 976 (1004)
T ss_pred cchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHh
Confidence 778899999999999999999999997 3333899999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHC
Q 038432 488 ENNVEMVNFLVMN 500 (602)
Q Consensus 488 ~~~~~iv~~Ll~~ 500 (602)
.|+.+++.+|-..
T Consensus 977 a~d~dlaayle~r 989 (1004)
T KOG0782|consen 977 AGDPDLAAYLESR 989 (1004)
T ss_pred cCCchHHHHHhhh
Confidence 9999999998754
No 125
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=98.65 E-value=3.1e-10 Score=106.46 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFN 94 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g 94 (602)
+++++-++|-+.|.-+.+.... ....+.+.+--.|+|||++|||||||||..|.|..++++..++.|.|
T Consensus 363 LLIFFlfIgviLFsSavYFAEa-----------de~~S~F~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCAiaG 431 (507)
T KOG1545|consen 363 LLIFFLFIGVILFSSAVYFAEA-----------DEPESHFSSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCAIAG 431 (507)
T ss_pred HHHHHHHHHHHHHhceeeeeec-----------CCCccCCCcCcccceEEEEEEEeeccccceecccCceehhhHHhhhh
Confidence 5666666677766655543211 11123344455799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhH
Q 038432 95 LGLTAYLIGNMTNLVVEGTR 114 (602)
Q Consensus 95 ~~~~~~~i~~i~~~~~~~~~ 114 (602)
++..|..+..+.+-+.-.+.
T Consensus 432 VLTiALPVPVIVsNFnyFYh 451 (507)
T KOG1545|consen 432 VLTIALPVPVIVSNFNYFYH 451 (507)
T ss_pred heEecccccEEEecccceee
Confidence 99999887766554443333
No 126
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.58 E-value=1.8e-07 Score=98.51 Aligned_cols=130 Identities=22% Similarity=0.216 Sum_probs=90.7
Q ss_pred chhhhHhhhcCcHHHHHHHHhc----CCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHH
Q 038432 332 SVNLLTVASTGNAAFLDELLKA----RLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDII 407 (602)
Q Consensus 332 ~t~L~~A~~~g~~~~~~~Ll~~----g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ 407 (602)
.-....|+..|+...++..++. ..++|.+|.-|+++|+.|+.+.+.+++++|++++... .
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g-------------- 89 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G-------------- 89 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--c--------------
Confidence 3456778888888888888763 2567788888888888888888888888888876544 2
Q ss_pred HHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHH
Q 038432 408 ILLDMNGNTALWEAISSKHHSIFRILYHCTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMA 487 (602)
Q Consensus 408 ~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~ 487 (602)
.+|.+|+..|..++|++++.+-........ .+..-...-..+.|||.+||.
T Consensus 90 --------dALL~aI~~~~v~~VE~ll~~~~~~~~~~~---------------------~~d~~~~~ft~ditPliLAAh 140 (822)
T KOG3609|consen 90 --------DALLLAIAVGSVPLVELLLVHFVDAPYLER---------------------SGDANSPHFTPDITPLMLAAH 140 (822)
T ss_pred --------hHHHHHHHHHHHHHHHHHHhcccccchhcc---------------------ccccCcccCCCCccHHHHHHH
Confidence 478888888888888888876543321100 111112233456677777777
Q ss_pred cCcHHHHHHHHHCCCCccc
Q 038432 488 ENNVEMVNFLVMNGSDVVG 506 (602)
Q Consensus 488 ~~~~~iv~~Ll~~ga~~~~ 506 (602)
.+|.||+++|+++|+++..
T Consensus 141 ~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 141 LNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred hcchHHHHHHHHcCCCCCC
Confidence 7777777777777777643
No 127
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.57 E-value=1.3e-07 Score=94.41 Aligned_cols=87 Identities=22% Similarity=0.318 Sum_probs=61.0
Q ss_pred HHHHHHcCChhHHHHHHhcCCCC--CC----CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH
Q 038432 418 LWEAISSKHHSIFRILYHCTAIS--DP----YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV 491 (602)
Q Consensus 418 Lh~A~~~~~~~~~~~Ll~~g~~~--~~----~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~ 491 (602)
|.-|+...+...+-+||.+|... |. .+|+|+||+||..|++.+.++|+=+|+|+-++|.+|+|||.||-+.|.-
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 45566666677777777776532 22 4567777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCc
Q 038432 492 EMVNFLVMNGSDV 504 (602)
Q Consensus 492 ~iv~~Ll~~ga~~ 504 (602)
+++.+|+++|+..
T Consensus 708 ec~d~llq~gcp~ 720 (749)
T KOG0705|consen 708 ECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHcCCCc
Confidence 7777777777643
No 128
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.56 E-value=6.2e-08 Score=96.29 Aligned_cols=86 Identities=26% Similarity=0.283 Sum_probs=52.7
Q ss_pred hHHHHHhcCCHHHHHHHH--HcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHHHHh
Q 038432 448 LLCTAEKRNDMSVMEELV--KYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQKRE 525 (602)
Q Consensus 448 ~L~~A~~~~~~~~~~~Ll--~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~ 525 (602)
|+|.++.....+-+..++ +.+..++.+|..|+||||+|+..|+.+.++.|+.+|||+..+|++|++|||-|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 355555555444333322 234456666666777777777777777777777777777777777777777777666665
Q ss_pred hhceeeec
Q 038432 526 IGHRITVH 533 (602)
Q Consensus 526 ~~~~l~~~ 533 (602)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 55554444
No 129
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.54 E-value=1.6e-07 Score=93.36 Aligned_cols=87 Identities=30% Similarity=0.400 Sum_probs=75.9
Q ss_pred hhhhHhhhcCcHHHHHHHHh--cCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHh
Q 038432 333 VNLLTVASTGNAAFLDELLK--ARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILL 410 (602)
Q Consensus 333 t~L~~A~~~g~~~~~~~Ll~--~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (602)
-|+|.++...+.+-+...+. .+..++..|..|+||||+|+..|+.+.++.|+.+||++..++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN---------------- 85 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKN---------------- 85 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccc----------------
Confidence 45999999888877666544 356788899999999999999999999999999999999998
Q ss_pred hccCCcHHHHHHHcCChhHHHHHHhc
Q 038432 411 DMNGNTALWEAISSKHHSIFRILYHC 436 (602)
Q Consensus 411 ~~~g~tpLh~A~~~~~~~~~~~Ll~~ 436 (602)
+.|++|||.|+..|+.+++..++.+
T Consensus 86 -~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 86 -NEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred -cccccHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999888777653
No 130
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.50 E-value=5.3e-08 Score=105.66 Aligned_cols=82 Identities=21% Similarity=0.241 Sum_probs=77.0
Q ss_pred CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 443 YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 443 ~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
..|.|+||.|+..+..-++++|+++|+++|..|..|+||||.+...|+...+..|+++||++++.|.+|.+|+++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999997664
Q ss_pred HH
Q 038432 523 KR 524 (602)
Q Consensus 523 ~~ 524 (602)
+.
T Consensus 734 ~~ 735 (785)
T KOG0521|consen 734 NA 735 (785)
T ss_pred cc
Confidence 43
No 131
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.50 E-value=2.9e-07 Score=91.98 Aligned_cols=90 Identities=27% Similarity=0.326 Sum_probs=64.4
Q ss_pred hhHhhhcCcHHHHHHHHhcCCC--CCC--CCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHh
Q 038432 335 LLTVASTGNAAFLDELLKARLD--PDI--GDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILL 410 (602)
Q Consensus 335 L~~A~~~g~~~~~~~Ll~~g~~--~n~--~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (602)
|..|+...++..+-.||.+|.. +|. .+.+|+|+||+||..|++.+.++|+=+|+|+-.+|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rd---------------- 691 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARD---------------- 691 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecc----------------
Confidence 4556666677777777776633 232 25567788888888888888888887788887777
Q ss_pred hccCCcHHHHHHHcCChhHHHHHHhcCCCCC
Q 038432 411 DMNGNTALWEAISSKHHSIFRILYHCTAISD 441 (602)
Q Consensus 411 ~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~ 441 (602)
..|+|||.||-+.|..+|+.+|+++|....
T Consensus 692 -a~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 692 -AHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred -cCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 778888888888888888888887776443
No 132
>PRK10537 voltage-gated potassium channel; Provisional
Probab=98.35 E-value=2e-06 Score=87.07 Aligned_cols=54 Identities=33% Similarity=0.533 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038432 56 RYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLV 109 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~ 109 (602)
.+.+|+||++.|+||+||||+.|.+..+++|+++++++|+.+|++.++.+...+
T Consensus 168 s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~p~ 221 (393)
T PRK10537 168 SLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPV 221 (393)
T ss_pred CHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999998887644
No 133
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.33 E-value=4.4e-07 Score=98.70 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=82.0
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcC
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAEN 489 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~ 489 (602)
..|.|+||.|+..|..-++++|++.|+++|. ..|++|||.+...|+...+..|+++|++.++.|.+|.+||++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 5689999999999999999999999999998 88999999999999999999999999999999999999999998887
Q ss_pred cHHHHHHHHHC
Q 038432 490 NVEMVNFLVMN 500 (602)
Q Consensus 490 ~~~iv~~Ll~~ 500 (602)
+.+++-+|...
T Consensus 734 ~~d~~~l~~l~ 744 (785)
T KOG0521|consen 734 NADIVLLLRLA 744 (785)
T ss_pred cccHHHHHhhh
Confidence 77777666543
No 134
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]
Probab=98.32 E-value=5.1e-06 Score=81.66 Aligned_cols=91 Identities=16% Similarity=0.303 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhc
Q 038432 53 LWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGR 132 (602)
Q Consensus 53 ~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~ 132 (602)
....|+.|+|....|+.++||||++|.|..++.++++..++|..+.+.+++.++. .-+..+--+.+++||-.
T Consensus 284 ~~~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sallvAvisR--------KLeLt~aEKhVhNFMmD 355 (489)
T KOG3684|consen 284 VTINYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLLVAVIAR--------KLELTKAEKHVHNFMMD 355 (489)
T ss_pred hHHHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999999998874 33444555678888888
Q ss_pred CCCChhHHHHHHHHHHHHH
Q 038432 133 NRLPPRLKKQILAYMCLRF 151 (602)
Q Consensus 133 ~~l~~~l~~ri~~y~~~~~ 151 (602)
.++.+++++-..+-++..|
T Consensus 356 tqLTk~~KnAAA~VLqeTW 374 (489)
T KOG3684|consen 356 TQLTKEHKNAAANVLQETW 374 (489)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888777776555554443
No 135
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=98.31 E-value=1.5e-06 Score=80.54 Aligned_cols=91 Identities=20% Similarity=0.304 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccc-----cchhHHHH-H
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAV-----NTVEMIFI-I 88 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~-----~~~e~~~~-~ 88 (602)
+++++|++||+++.+..........+......+....+.++.|..|+||...++|+.|+||..+. +..+.++. +
T Consensus 104 ~~~~~~~~a~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~f~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (200)
T PF00520_consen 104 LFIVLLFFACIGYQLFGGSDNSCCDPTWDSENDIYGYENFDSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFIS 183 (200)
T ss_dssp HHHHHHHHHHHHHHHHTTTS-------SS----SSTHHHHSSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHH
T ss_pred cccccccccchhheecccccccccccccccccccccccccccccccccccccccccCCccccccccccccchhHhHHhhh
Confidence 77888999999998876543322221122223445556788999999999999999999999887 78888888 6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038432 89 FYMLFNLGLTAYLIGNM 105 (602)
Q Consensus 89 ~~~~~g~~~~~~~i~~i 105 (602)
+..+++.++++.++|.+
T Consensus 184 ~~~i~~~~l~nlliavi 200 (200)
T PF00520_consen 184 FIIIVSILLLNLLIAVI 200 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhcC
Confidence 66677778889988865
No 136
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.29 E-value=6.2e-07 Score=77.26 Aligned_cols=63 Identities=22% Similarity=0.291 Sum_probs=34.0
Q ss_pred CCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCC-CCcccCCCCCCChhhHHHHHHHHhhhceee
Q 038432 469 LNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNG-SDVVGANKCEFSSTNLNDMLQKREIGHRIT 531 (602)
Q Consensus 469 a~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~g-a~~~~~d~~g~t~l~~a~~~~~~~~~~~l~ 531 (602)
.++|++|..|+|||+.|+..|+.+.+.+|+.+| ++|...|..|.+++.+|.+.|..++++.|.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lf 66 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLF 66 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHH
Confidence 345555555555555555555555555555555 555555555555555555555555555443
No 137
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.24 E-value=1.4e-06 Score=91.84 Aligned_cols=114 Identities=19% Similarity=0.253 Sum_probs=100.8
Q ss_pred HHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehhhhhcCCCceeEEEEc
Q 038432 194 EIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTK 272 (602)
Q Consensus 194 ~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~ 272 (602)
.++..+=..+......+|+.++++||..+++|+|.+|.++-.... +++...+..++.||.+|+..++++.++..|+.|.
T Consensus 499 p~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~Av 578 (1158)
T KOG2968|consen 499 PFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAV 578 (1158)
T ss_pred HHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhhcCCccceEEEE
Confidence 345566667778999999999999999999999999999987653 3355588999999999999999999999999999
Q ss_pred ceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhh
Q 038432 273 TLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQH 307 (602)
Q Consensus 273 ~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~ 307 (602)
.++++.+++...|..+..++|....++.+.+.++.
T Consensus 579 RdSelariPe~l~~~ik~ryP~v~~rl~~ll~~~~ 613 (1158)
T KOG2968|consen 579 RDSELARIPEGLLNFIKLRYPQVVTRLIKLLAEKI 613 (1158)
T ss_pred eehhhhhccHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 99999999999999999999999988888776664
No 138
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.22 E-value=3e-06 Score=73.14 Aligned_cols=70 Identities=23% Similarity=0.177 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcc-cCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHH
Q 038432 354 RLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHA-SNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRI 432 (602)
Q Consensus 354 g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~ 432 (602)
+.++|.+|..|+|||+.|+..|+.+.|.+|+.+| +.+...| ..|.+++.+|-..|..+.++.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d-----------------~ssldaaqlaek~g~~~fvh~ 64 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTD-----------------ESSLDAAQLAEKGGAQAFVHS 64 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccc-----------------cccchHHHHHHhcChHHHHHH
Confidence 4588999999999999999999999999999999 8898887 999999999999999999999
Q ss_pred HHhcCCCC
Q 038432 433 LYHCTAIS 440 (602)
Q Consensus 433 Ll~~g~~~ 440 (602)
|.+...+.
T Consensus 65 lfe~~~et 72 (223)
T KOG2384|consen 65 LFENDRET 72 (223)
T ss_pred HHHHhccC
Confidence 98875443
No 139
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.21 E-value=5.4e-06 Score=79.01 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=54.2
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChh
Q 038432 448 LLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSST 515 (602)
Q Consensus 448 ~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l 515 (602)
-|..||+.|+.+.+++|++.|.++|+.|....+||.+|+-.||..+|++|+++||-...-..+|..++
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 36778888888888888888888888888888888888888888888888888887665555565543
No 140
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.19 E-value=5.9e-07 Score=89.73 Aligned_cols=130 Identities=17% Similarity=0.321 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhc
Q 038432 53 LWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGR 132 (602)
Q Consensus 53 ~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~ 132 (602)
....|+.|.|+-++||+||||||+...|..++.|.+|++++|..+||..+..+..++.+..+-.-+|+..--. ++
T Consensus 285 hrltyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~glamfasyvpeiielignr~kyggeyk~ehgk-----kh 359 (1103)
T KOG1420|consen 285 HRLTYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGEYKAEHGK-----KH 359 (1103)
T ss_pred ccchhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHccccccCceeehhcCC-----ee
Confidence 3457999999999999999999999999999999999999999999999999999998877655555432100 00
Q ss_pred CCCC-hhHHHHHHHHHHHHHHh-h-cchh-HHHHhhCCHHHHHHHHHHhhHhhhhhhccccc
Q 038432 133 NRLP-PRLKKQILAYMCLRFKA-E-SLNQ-HQLIEQLPKSICKSICQHLFLHTVEKVYLFKD 190 (602)
Q Consensus 133 ~~l~-~~l~~ri~~y~~~~~~~-~-~~~~-~~~l~~lp~~l~~~v~~~~~~~~l~~~~~f~~ 190 (602)
.-+- .-..+.|..|+.-.... + ..+. .-++..+||.|.-| .+++....++.||++
T Consensus 360 ivvcghityesvshflkdflhedrddvdvevvflhr~~pdlele---glfkrhft~veffqg 418 (1103)
T KOG1420|consen 360 IVVCGHITYESVSHFLKDFLHEDRDDVDVEVVFLHRISPDLELE---GLFKRHFTQVEFFQG 418 (1103)
T ss_pred EEEecceeHHHHHHHHHHHhhccccccceEEEEEecCCCCcchH---HHHhhheeeEEEecc
Confidence 0000 11123344444322211 1 1221 23566777776554 355566667777764
No 141
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.13 E-value=4.5e-06 Score=79.52 Aligned_cols=60 Identities=22% Similarity=0.320 Sum_probs=56.5
Q ss_pred hhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCch
Q 038432 334 NLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLR 393 (602)
Q Consensus 334 ~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~ 393 (602)
-|..||+.|+.+.+++|++.|.++|.+|....+||.+|+..||.++|++|+++||-...-
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd 98 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD 98 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc
Confidence 489999999999999999999999999999999999999999999999999999866543
No 142
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.13 E-value=6.2e-06 Score=89.19 Aligned_cols=126 Identities=15% Similarity=0.096 Sum_probs=70.4
Q ss_pred CCCCCCCCchHHHHHHhcCChHHHHHHHhc-ccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHh
Q 038432 357 PDIGDSKGRTPLHIAASKGHEECVLVLLKH-ASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYH 435 (602)
Q Consensus 357 ~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~ 435 (602)
.......|+|.||+++..++.-.++.+++. |...+..| .+|.-.+|+ |..++.+.+-+|+.
T Consensus 567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld-----------------~d~qgV~hf-ca~lg~ewA~ll~~ 628 (975)
T KOG0520|consen 567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELD-----------------RDGQGVIHF-CAALGYEWAFLPIS 628 (975)
T ss_pred cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhc-----------------ccCCChhhH-hhhcCCceeEEEEe
Confidence 344556788888888888888888888875 55555444 667777777 33344444333321
Q ss_pred cCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcc------cCCC
Q 038432 436 CTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVV------GANK 509 (602)
Q Consensus 436 ~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~------~~d~ 509 (602)
-+|..++.+|..|+||||+|+..|+..++..|++.|++.. ..+-
T Consensus 629 ------------------------------~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p 678 (975)
T KOG0520|consen 629 ------------------------------ADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETP 678 (975)
T ss_pred ------------------------------ecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCC
Confidence 2344455555555555555555555555555555444332 1222
Q ss_pred CCCChhhHHHHHHHHhhhcee
Q 038432 510 CEFSSTNLNDMLQKREIGHRI 530 (602)
Q Consensus 510 ~g~t~l~~a~~~~~~~~~~~l 530 (602)
.|.|+-.+|...++..+..+|
T Consensus 679 ~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 679 GGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred CCCchhhhhhcccccchHHHH
Confidence 355555555555554444443
No 143
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.02 E-value=6.2e-06 Score=89.20 Aligned_cols=123 Identities=15% Similarity=0.046 Sum_probs=100.2
Q ss_pred CCCCCchhhhHhhhcCcHHHHHHHHhc-CCCCCCCCCCCchHHHHHHhcCChHHHHHHHh-cccCCCchhhHHHHhccch
Q 038432 327 GDPNMSVNLLTVASTGNAAFLDELLKA-RLDPDIGDSKGRTPLHIAASKGHEECVLVLLK-HASNVHLRDYIIFMYNLSY 404 (602)
Q Consensus 327 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~-g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~ 404 (602)
....|.+.+|.++..++...++.+++- |...+..|.+|.-.+|+ |..++.+++-+|+. .|..++.+|
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D---------- 638 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRD---------- 638 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccccc----------
Confidence 556789999999999999999999985 66667777888888888 55566666665554 588999988
Q ss_pred hHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--------CCcchhHHHHHhcCCHHHHHHHHHc
Q 038432 405 DIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDP--------YTAGDLLCTAEKRNDMSVMEELVKY 467 (602)
Q Consensus 405 ~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--------~~g~t~L~~A~~~~~~~~~~~Ll~~ 467 (602)
..|+||||+|+..|+..++..|++.|++... ..|.|+-..|..+|+..+.-+|-+.
T Consensus 639 -------~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 639 -------RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred -------CCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999999999999988875542 4577888888888888877777655
No 144
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=97.96 E-value=4.7e-07 Score=86.23 Aligned_cols=60 Identities=23% Similarity=0.291 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038432 53 LWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 53 ~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~ 112 (602)
.++....+||++++||||.||||.+|.|.++++|..++.+.|+++.|+.+..+.+-+...
T Consensus 353 ~FTsIPaaFWYTIVTmTTLGYGDMVp~TIaGKIfGsiCSLSGVLVIALPVPvIVSNFSRI 412 (632)
T KOG4390|consen 353 KFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRI 412 (632)
T ss_pred ccccCcHhHhhheeeeeeccccccchHHHHHHHhhhhhcccceEEEeccccEEEechhHH
Confidence 334445799999999999999999999999999999999999999988776555444433
No 145
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....
Probab=97.83 E-value=0.00015 Score=71.71 Aligned_cols=93 Identities=24% Similarity=0.330 Sum_probs=63.0
Q ss_pred HHHHHHH--HHHHHHHHhhcCCC-C----CCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCc--cccccchhHH
Q 038432 15 DIILVHC--AGCLYYLLADRYPH-K----GETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGD--LHAVNTVEMI 85 (602)
Q Consensus 15 ~l~~~H~--~aC~~~~~~~~~~~-~----~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd--~~~~~~~e~~ 85 (602)
+.+++.| +|++||+++....+ . +..|-+ +. .....+..+|++++.|+||+|||. +.|......+
T Consensus 43 ~~y~~~~~~Fa~~y~~i~~~~gdl~~~~~~~~~~~-----Cv--~~~~~f~~aF~FSveT~tTIGYG~~~~~~~c~~a~~ 115 (336)
T PF01007_consen 43 LSYLLSWLFFALLYYLIAYSHGDLEPIHADSNWTP-----CV--SNVNSFTSAFLFSVETQTTIGYGSRYPTPECPYAIF 115 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCTTTSBTTS-T-----SE--CT-TTHHHHHHHHHHHHTT---SSSEB-CSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchhcccccCCCC-----ce--ecccchhhheeEEEEEEEEeccCCcccCCCcchhHH
Confidence 4444444 68999998854322 1 112211 00 113468999999999999999998 5677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 038432 86 FIIFYMLFNLGLTAYLIGNMTNLVVEGTR 114 (602)
Q Consensus 86 ~~~~~~~~g~~~~~~~i~~i~~~~~~~~~ 114 (602)
+..+-+++|.++.++++|.+..-+....+
T Consensus 116 l~~~q~~~g~l~~a~~~Glvfar~srP~~ 144 (336)
T PF01007_consen 116 LVTIQSLVGLLLDAFMTGLVFARFSRPKK 144 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 88899999999999999999887765543
No 146
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.81 E-value=4.4e-05 Score=80.99 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=101.9
Q ss_pred CCchHHHHHHhcCChHHHHHHHhcc----cCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCC
Q 038432 363 KGRTPLHIAASKGHEECVLVLLKHA----SNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTA 438 (602)
Q Consensus 363 ~g~t~Lh~A~~~g~~~~v~~Ll~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~ 438 (602)
.+.--.-.||..|+.-.|+..++.. .++|..| .-|.++|+.|+.+.+.+++++|++++.
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d-----------------~lGr~al~iai~nenle~~eLLl~~~~ 86 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRD-----------------PLGRLALHIAIDNENLELQELLLDTSS 86 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccC-----------------hHhhhceecccccccHHHHHHHhcCcc
Confidence 3445577899999999999888753 3555555 889999999999999999999998776
Q ss_pred CCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHH
Q 038432 439 ISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLN 518 (602)
Q Consensus 439 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a 518 (602)
.. +.+|..|+..|..++++.++.+........ . .+.+....-.-+.||+.+|
T Consensus 87 ~~-----gdALL~aI~~~~v~~VE~ll~~~~~~~~~~--------~---------------~~d~~~~~ft~ditPliLA 138 (822)
T KOG3609|consen 87 EE-----GDALLLAIAVGSVPLVELLLVHFVDAPYLE--------R---------------SGDANSPHFTPDITPLMLA 138 (822)
T ss_pred cc-----chHHHHHHHHHHHHHHHHHHhcccccchhc--------c---------------ccccCcccCCCCccHHHHH
Confidence 55 567888888888899998888754432211 1 2333334445689999999
Q ss_pred HHHHHHhhhceeeeccCCCchhH
Q 038432 519 DMLQKREIGHRITVHDDNSTQNE 541 (602)
Q Consensus 519 ~~~~~~~~~~~l~~~~~~~~~~~ 541 (602)
|..++.|+++.|+..+...+...
T Consensus 139 Ah~NnyEil~~Ll~kg~~i~~PH 161 (822)
T KOG3609|consen 139 AHLNNFEILQCLLTRGHCIPIPH 161 (822)
T ss_pred HHhcchHHHHHHHHcCCCCCCCc
Confidence 99999999999999987666443
No 147
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=97.58 E-value=6.7e-05 Score=78.83 Aligned_cols=58 Identities=26% Similarity=0.583 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 038432 56 RYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGT 113 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~ 113 (602)
.+..|+|++.+++||+|||++.|.|..+++++++..++|+-++..+++.+...+...-
T Consensus 115 ~f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~~~ 172 (433)
T KOG1418|consen 115 SFSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLADSL 172 (433)
T ss_pred ecchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5779999999999999999999999999999999999999999999999998877654
No 148
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.55 E-value=9.4e-05 Score=73.41 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCCC------CCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHHH
Q 038432 458 MSVMEELVKYGLNVD------SKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLND 519 (602)
Q Consensus 458 ~~~~~~Ll~~ga~~n------~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~ 519 (602)
.+.+++|.+++++.| ..|..-.|+||+|+..|..++|..||+.|+|+..+|..|.||.+++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 567888888877765 34556678999999999999999999999999999999999988875
No 149
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=97.17 E-value=0.0011 Score=64.31 Aligned_cols=101 Identities=20% Similarity=0.315 Sum_probs=71.1
Q ss_pred hhhHHHHHHHHHHH--HHHHHHHHhhcCCCC-----CCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCcccc--
Q 038432 8 HQDVRFCDIILVHC--AGCLYYLLADRYPHK-----GETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHA-- 78 (602)
Q Consensus 8 ~~~i~~~~l~~~H~--~aC~~~~~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~-- 78 (602)
..++.|.+-|+++| ||++||+++...++- +..|.+=. .....+..||-|++-|=||+|||--.+
T Consensus 64 ~~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tpCV-------~nV~sf~sAFLFSiETQtTIGYG~R~vTe 136 (400)
T KOG3827|consen 64 WMLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTPCV-------MNVHSFTSAFLFSIETQTTIGYGFRYVTE 136 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCcce-------eeccchhhhheeeeeeeeeeeccccccCc
Confidence 34556667888888 699999999764431 22333211 123456788889999999999996544
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Q 038432 79 VNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRR 115 (602)
Q Consensus 79 ~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~ 115 (602)
.=+...+..++-+|+|+++.++++|.+..-+....++
T Consensus 137 eCP~aI~ll~~Q~I~g~ii~afm~G~i~aKiarPkKR 173 (400)
T KOG3827|consen 137 ECPEAIFLLVLQSILGVIINAFMVGAIFAKIARPKKR 173 (400)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Confidence 3345566677778899999999999998766665443
No 150
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=97.16 E-value=0.0035 Score=67.12 Aligned_cols=111 Identities=17% Similarity=0.291 Sum_probs=91.1
Q ss_pred HHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEec-cCceeEEEEeCCCCeeehh-hh---hcCCC---ceeEE
Q 038432 198 LLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYE-MEKEIAVGTLQTGDMFGEV-GA---LCCRP---QIYTY 269 (602)
Q Consensus 198 ~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~-~~~~~~~~~l~~g~~fGe~-~l---l~~~~---~~~tv 269 (602)
+++.+++.+.+..|++|++.|++.+.+|.+.+|.+++.... .+++..+..+.+|+.|-.. ++ +.+.| +...+
T Consensus 110 ~L~rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V~~G~~~tSllSiLd~l~~~ps~~~~i~a 189 (1158)
T KOG2968|consen 110 ELDRHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTVPPGGSFTSLLSILDSLPGFPSLSRTIAA 189 (1158)
T ss_pred eechhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeeccCCCchHhHHHHHHhccCCCcccceeee
Confidence 44588888999999999999999999999999999998654 4578899999999766433 33 33444 35778
Q ss_pred EEcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhh
Q 038432 270 RTKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHK 308 (602)
Q Consensus 270 ~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~ 308 (602)
+|.++|.+..++...|.+....+|+....+.+..+.+..
T Consensus 190 kA~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvmTRLq 228 (1158)
T KOG2968|consen 190 KAATDCTVARIPYTSFRESFHKNPESSIRIIQVVMTRLQ 228 (1158)
T ss_pred eeecCceEEEeccchhhhhhccChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776655543
No 151
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.09 E-value=0.00089 Score=39.45 Aligned_cols=29 Identities=34% Similarity=0.660 Sum_probs=21.9
Q ss_pred CCcCHHHHHHHcCcHHHHHHHHHCCCCcc
Q 038432 477 HGRTAIEIAMAENNVEMVNFLVMNGSDVV 505 (602)
Q Consensus 477 ~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~ 505 (602)
+|.||+|+|+..++.++++.|+++|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36778888888888888888887777654
No 152
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.06 E-value=0.0013 Score=62.28 Aligned_cols=58 Identities=22% Similarity=0.457 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhhcccCccccccc-------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 038432 56 RYISAMYWSITTMTTVGYGDLHAVNT-------V-EMIFIIFYMLFNLGLTAYLIGNMTNLVVEGT 113 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGygd~~~~~~-------~-e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~ 113 (602)
.|++|+|+.++|+||+|+||.++... . -+.++.+.+++|..+++..++.+.-.+..++
T Consensus 186 syfds~YyCFITltTIGFGDyValQ~~~alq~qplYv~~sf~fIL~Gl~vi~a~~NllvLrf~t~~ 251 (350)
T KOG4404|consen 186 SYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLYVFFSFVFILLGLCVIYALLNLLVLRFMTMN 251 (350)
T ss_pred chhhhhheeeeeeeeccccchhhhcchhhhhCCCceehHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 58999999999999999999988432 2 3446666677888888877776655554443
No 153
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=97.04 E-value=0.0038 Score=64.40 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=122.4
Q ss_pred HHhhHhhhhhhcccccCCHHHHHHHHHhcccee-cCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCe
Q 038432 175 QHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEY-IPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDM 253 (602)
Q Consensus 175 ~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~~-~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~ 253 (602)
.+...+++.+.|.|.+++....++||..+.... -..|.+|...|+.-++.++|++|.|+|...++..+ .+.-|+.
T Consensus 276 ieqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~PdGk~e----~l~mGnS 351 (1283)
T KOG3542|consen 276 IEQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKPDGKRE----ELKMGNS 351 (1283)
T ss_pred HHHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecCCCceE----Eeecccc
Confidence 345567889999999999999999999887544 57899999999999999999999999998877443 5777999
Q ss_pred eehhhhhcCCCceeEEE-EcceeEEEEeeHHHHHHHHHhChHHHHHHHHHHHHhhhhhhcccccccccccCCCCCCCCCc
Q 038432 254 FGEVGALCCRPQIYTYR-TKTLSQLLRLKTSALIEAMQSKQEDNVSILKNFLQQHKKLKDLNIGDLIAESGEEDGDPNMS 332 (602)
Q Consensus 254 fGe~~ll~~~~~~~tv~-a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 332 (602)
||...-....-....++ -..+|+...+...++..++..-.+...+. .. ..+......-..-+..|.
T Consensus 352 FG~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~vekn~~Kv--------ee-----eGEiVmv~EhReldrsGT 418 (1283)
T KOG3542|consen 352 FGAEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTVEKNIEKV--------EE-----EGEIVMVVEHRELDRSGT 418 (1283)
T ss_pred cCCCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHHHhhhhhh--------hc-----cCcEEEEEeeeeccccCc
Confidence 99764333221111222 34679999999999888776544322111 11 111111111111233343
Q ss_pred hhhhHhhhcCcHHHHHHHHhcCCC--CCCCCCCCchHHHHHH-hcCChHHHHHHHhcccCCCchh
Q 038432 333 VNLLTVASTGNAAFLDELLKARLD--PDIGDSKGRTPLHIAA-SKGHEECVLVLLKHASNVHLRD 394 (602)
Q Consensus 333 t~L~~A~~~g~~~~~~~Ll~~g~~--~n~~d~~g~t~Lh~A~-~~g~~~~v~~Ll~~g~~~~~~~ 394 (602)
..=|..+..--...+..|++...+ +...+. -.|-|-. ...-.++-+.|++.=++...+|
T Consensus 419 rkGhivIKgtperLimHLveEhs~VDPtyieD---FLLTYRtFl~sP~~vg~KLleWF~d~slRD 480 (1283)
T KOG3542|consen 419 RKGHIVIKGTPERLIMHLVEEHSNVDPTYIED---FLLTYRTFLRSPTTVGEKLLEWFADSSLRD 480 (1283)
T ss_pred ccceEEEecChHHHHHHHHhhcccCCchHHHH---HHHHHHHHhcChHHHHHHHHHHhccchHhh
Confidence 334444444444566667765433 322221 1222322 2233466677777766666555
No 154
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.94 E-value=0.0012 Score=38.82 Aligned_cols=29 Identities=45% Similarity=0.798 Sum_probs=22.7
Q ss_pred CCchHHHHHHhcCChHHHHHHHhcccCCC
Q 038432 363 KGRTPLHIAASKGHEECVLVLLKHASNVH 391 (602)
Q Consensus 363 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~ 391 (602)
.|.||+|+|+..++.++++.|++.|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36788888888888888888888877654
No 155
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=96.84 E-value=0.019 Score=52.08 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=75.4
Q ss_pred HHHHHHhccceecCCCCeE-EccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhhhhcCCCceeEEEEcce
Q 038432 196 IVLLVAKMKAEYIPPREDV-IMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTL 274 (602)
Q Consensus 196 l~~l~~~~~~~~~~~g~~i-~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~ 274 (602)
.+.+....++..+.+|..+ +...+.....|++.+|.|.+.. .+ +..+.....-..||-...+.+....+..++.+.
T Consensus 15 ~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsirr-~d--~ll~~t~~aP~IlGl~~~~~~~~~~~~l~ae~~ 91 (207)
T PRK11832 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EE--NVLIGITQAPYIMGLADGLMKNDIPYKLISEGN 91 (207)
T ss_pred HHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEEe-cC--CeEEEeccCCeEeecccccCCCCceEEEEEcCc
Confidence 3455556667889999997 5554555679999999999953 22 377778888889998877776666688999999
Q ss_pred eEEEEeeHHHHHHHHHhCh
Q 038432 275 SQLLRLKTSALIEAMQSKQ 293 (602)
Q Consensus 275 ~~l~~l~~~~~~~~l~~~~ 293 (602)
|....++.+++.++++++.
T Consensus 92 c~~~~i~~~~~~~iie~~~ 110 (207)
T PRK11832 92 CTGYHLPAKQTITLIEQNQ 110 (207)
T ss_pred cEEEEeeHHHHHHHHHHhc
Confidence 9999999999999998776
No 156
>PF11834 DUF3354: Domain of unknown function (DUF3354); InterPro: IPR021789 Potassium channels take part in important processes of higher plants, including opening and closing of stomatal pores and leaf movement. Inward rectifying potassium (K(+)in) channels play an important role in turgor regulation and ion uptake in higher plants. All of them comprise, from their N-terminal to their C-terminal ends: a short hydrophilic region, a hydrophobic region structurally analogous and partially homologous to the transmembrane domain of voltage-gated animal channels from the Shaker superfamily, a putative cyclic nucleotide-binding domain, and a conserved C-terminal KHA domain. Between these last two regions, some of them (AKT1, AKT2 and SKT1) contain an ankyrin-repeat domain with six repeats homologous to those of human erythrocyte ankyrin. This entry represents the KHA domain which is unique to plant K(+)in channels. The KHA domain contains two high-homology blocks enriched for hydrophobic and acidic residues, respectively. The KHA domain is essential for interaction of plant K(+)in channels. The KHA domain mediates tetramerization and/or stabilisation of the heteromers [, , ].
Probab=96.76 E-value=0.0015 Score=47.55 Aligned_cols=35 Identities=51% Similarity=0.744 Sum_probs=30.3
Q ss_pred ceeEEEecCCCcccccccccccCeEEeccccHHHHHhhC
Q 038432 564 CQRVSIYRGHPLVRKQACCMEAGRLIKLPNSLEELKKIA 602 (602)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (602)
+.++.++.+||..+ +..+|+++++|+|++||.++|
T Consensus 1 ~~RVtI~~~~~~~~----~~~~GKvi~lP~SleeLl~ia 35 (69)
T PF11834_consen 1 PKRVTIFPNHPPEK----GRRAGKVIWLPDSLEELLKIA 35 (69)
T ss_pred CcEEEEecCCCCcc----cCcCCEEEEcCccHHHHHHHH
Confidence 35789999999877 447899999999999999986
No 157
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=96.56 E-value=0.00025 Score=66.94 Aligned_cols=52 Identities=27% Similarity=0.560 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 038432 56 RYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTN 107 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~ 107 (602)
++..||||+.+-+||+|||-.+|.|..+++|+++..++|+-+-..++..+..
T Consensus 80 kF~GaFYFa~TVItTIGyGhstP~T~~GK~Fcm~Yal~Gipl~lvmFqs~gE 131 (350)
T KOG4404|consen 80 KFAGAFYFATTVITTIGYGHSTPSTDGGKAFCMFYALVGIPLTLVMFQSIGE 131 (350)
T ss_pred ccCcceEEEEEEEeeeccCCCCCCCcCceehhhhHHHhcCchHHHHHHHHHH
Confidence 4667999999999999999999999999999999999999888888877764
No 158
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.50 E-value=0.003 Score=63.14 Aligned_cols=64 Identities=23% Similarity=0.300 Sum_probs=55.0
Q ss_pred CcHHHHHHHHhcCCCCCCC------CCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCC
Q 038432 342 GNAAFLDELLKARLDPDIG------DSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGN 415 (602)
Q Consensus 342 g~~~~~~~Ll~~g~~~n~~------d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 415 (602)
.-.+.++.|.+++.+.|.. +..-.|+||+|+..|..++|.+||+.|+|+..+| ..|.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd-----------------~~Gr 464 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKD-----------------GAGR 464 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcc-----------------cCCC
Confidence 3467888899888777653 4446799999999999999999999999999998 9999
Q ss_pred cHHHHHH
Q 038432 416 TALWEAI 422 (602)
Q Consensus 416 tpLh~A~ 422 (602)
||..++.
T Consensus 465 tpy~ls~ 471 (591)
T KOG2505|consen 465 TPYSLSA 471 (591)
T ss_pred Ccccccc
Confidence 9999886
No 159
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.45 E-value=0.019 Score=51.58 Aligned_cols=90 Identities=22% Similarity=0.279 Sum_probs=59.6
Q ss_pred CCcHHHHHHHcCChhHHHHHHhcCC----CCCC-CCcchhHHHH--HhcCCHHHHHHHHHcC-CCCCC---CCCCCcCHH
Q 038432 414 GNTALWEAISSKHHSIFRILYHCTA----ISDP-YTAGDLLCTA--EKRNDMSVMEELVKYG-LNVDS---KDRHGRTAI 482 (602)
Q Consensus 414 g~tpLh~A~~~~~~~~~~~Ll~~g~----~~~~-~~g~t~L~~A--~~~~~~~~~~~Ll~~g-a~~n~---~d~~g~TpL 482 (602)
-.+++.+|+.++..+++.+|++.-. |+-. ..+.--+.++ ....+..++++.+++| +++|. +-+.|.|-|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 3466666666666666666665321 1110 1111122222 2334677899999988 67774 356899999
Q ss_pred HHHHHcCcHHHHHHHHHCCCC
Q 038432 483 EIAMAENNVEMVNFLVMNGSD 503 (602)
Q Consensus 483 h~A~~~~~~~iv~~Ll~~ga~ 503 (602)
.-|.+.++.+++.+||++||-
T Consensus 259 DNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCcc
Confidence 999999999999999999984
No 160
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=96.33 E-value=0.27 Score=41.75 Aligned_cols=104 Identities=10% Similarity=0.011 Sum_probs=83.4
Q ss_pred cCCHHHHHHHHHh-ccceecCCCCeEEccCC-CCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhhhhcC-----
Q 038432 190 DVSKEIIVLLVAK-MKAEYIPPREDVIMQNE-APDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVGALCC----- 262 (602)
Q Consensus 190 ~~s~~~l~~l~~~-~~~~~~~~g~~i~~~g~-~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~~----- 262 (602)
+.|....++++.+ .+.....+|+.-..||. +.+.+-++++|.+.|... ...+-.+.+.+|.........
T Consensus 14 ~Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~~----g~fLH~I~p~qFlDSPEW~s~~~s~~ 89 (153)
T PF04831_consen 14 KVSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSCD----GRFLHYIYPYQFLDSPEWESLRPSED 89 (153)
T ss_pred CCCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEEC----CEeeEeecccccccChhhhccccCCC
Confidence 5688888899888 56688999999888885 567799999999999863 256777788888776544433
Q ss_pred CCceeEEEEcceeEEEEeeHHHHHHHHHhChHHHH
Q 038432 263 RPQIYTYRTKTLSQLLRLKTSALIEAMQSKQEDNV 297 (602)
Q Consensus 263 ~~~~~tv~a~~~~~l~~l~~~~~~~~l~~~~~~~~ 297 (602)
.....|+.|.+.|..+..+++.+.-++...|-...
T Consensus 90 ~~FQVTitA~~~Cryl~W~R~kL~~~l~~~~~L~~ 124 (153)
T PF04831_consen 90 DKFQVTITAEEDCRYLCWPREKLYLLLAKDPFLAA 124 (153)
T ss_pred CeEEEEEEEcCCcEEEEEEHHHHHHHHhhCHHHHH
Confidence 33468999999999999999999999999886553
No 161
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.20 E-value=0.049 Score=47.70 Aligned_cols=137 Identities=15% Similarity=0.181 Sum_probs=90.6
Q ss_pred chhhhHhhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhh
Q 038432 332 SVNLLTVASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLD 411 (602)
Q Consensus 332 ~t~L~~A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~ 411 (602)
+..+..|+..+...+++..-+...+- -...++.+-.||+..+.|+|+|.-+. ....
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~i~------------------ 102 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LHIY------------------ 102 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cCCC------------------
Confidence 45677899999999998887653211 23567889999999999999999443 2221
Q ss_pred ccCCcHHHHHHHcCChhHHH----HHHhcCCCCCCC----CcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHH
Q 038432 412 MNGNTALWEAISSKHHSIFR----ILYHCTAISDPY----TAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIE 483 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~----~Ll~~g~~~~~~----~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh 483 (602)
+-.+-+-.|....+.++.. ++.++....... --..-|..|+..|-...+...+++|.+++. ++|.
T Consensus 103 -~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls 175 (192)
T PF03158_consen 103 -NPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLS 175 (192)
T ss_pred -CchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHH
Confidence 1224455666666655421 122221111000 001246788899999888888899887753 7899
Q ss_pred HHHHcCcHHHHHHHHH
Q 038432 484 IAMAENNVEMVNFLVM 499 (602)
Q Consensus 484 ~A~~~~~~~iv~~Ll~ 499 (602)
.|+..++..|+.+++.
T Consensus 176 ~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 176 QAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHhhHHHHHHHhhc
Confidence 9999999988888764
No 162
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.40 E-value=0.091 Score=46.06 Aligned_cols=138 Identities=15% Similarity=0.047 Sum_probs=97.4
Q ss_pred chHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhcCCCCCCCC
Q 038432 365 RTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHCTAISDPYT 444 (602)
Q Consensus 365 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~~~ 444 (602)
+-.|..|+..+...+.+..-+...+- . ..+++-+-.||+..+.|+|+|. |-+....+
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~--~------------------~~~q~LFElAC~~qkydiV~WI---~qnL~i~~ 103 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE--R------------------YLNQELFELACEEQKYDIVKWI---GQNLHIYN 103 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc--h------------------hHHHHHHHHHHHHccccHHHHH---hhccCCCC
Confidence 34577889999999998876654322 1 3456788999999999999999 33444455
Q ss_pred cchhHHHHHhcCCHHHH----HHHHHcCCCCCCCCC--CCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCChhhHH
Q 038432 445 AGDLLCTAEKRNDMSVM----EELVKYGLNVDSKDR--HGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSSTNLN 518 (602)
Q Consensus 445 g~t~L~~A~~~~~~~~~----~~Ll~~ga~~n~~d~--~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a 518 (602)
-.+..-.|....+.+.. .++.++...-+..|. --..-|..|+..|-...+.-.+++|.+++. +.|..|
T Consensus 104 ~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~A 177 (192)
T PF03158_consen 104 PEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQA 177 (192)
T ss_pred chhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHH
Confidence 56677788888887652 222333221111110 111357899999999999999999999973 899999
Q ss_pred HHHHHHhhhceee
Q 038432 519 DMLQKREIGHRIT 531 (602)
Q Consensus 519 ~~~~~~~~~~~l~ 531 (602)
+..+++.+..+.+
T Consensus 178 v~ynhRkIL~yfi 190 (192)
T PF03158_consen 178 VKYNHRKILDYFI 190 (192)
T ss_pred HHhhHHHHHHHhh
Confidence 9999998876654
No 163
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=93.43 E-value=0.013 Score=61.33 Aligned_cols=48 Identities=27% Similarity=0.540 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhhcccCccccccchhH--------HHHHHHHHHHHHHHHHHH
Q 038432 55 IRYISAMYWSITTMTTVGYGDLHAVNTVEM--------IFIIFYMLFNLGLTAYLI 102 (602)
Q Consensus 55 ~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~--------~~~~~~~~~g~~~~~~~i 102 (602)
-.|+.|+|++++++||+||||+.|.+...+ .+..++.++|...++.+.
T Consensus 241 w~f~~~~Yf~fisltTIG~GD~vp~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (433)
T KOG1418|consen 241 WSFIEAFYFSFISLTTIGFGDIVPRTLLGRFRREELVDPLASVWILSGLALLALVL 296 (433)
T ss_pred eeeEeeeeEEEEEeeeecCCccccCCCcceeeccccccchhHHHHHhhhhHHHHHh
Confidence 468899999999999999999999998755 678888888888887776
No 164
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.31 E-value=0.78 Score=41.65 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=27.7
Q ss_pred ChhHHHHHHhcC-CCCCC-----CCcchhHHHHHhcCCHHHHHHHHHcCC
Q 038432 426 HHSIFRILYHCT-AISDP-----YTAGDLLCTAEKRNDMSVMEELVKYGL 469 (602)
Q Consensus 426 ~~~~~~~Ll~~g-~~~~~-----~~g~t~L~~A~~~~~~~~~~~Ll~~ga 469 (602)
+..+++..+++| +++|. ..|.|-|.-|.++++.+++..|+++||
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 445566666665 34443 566666777777777777777777766
No 165
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=92.21 E-value=0.24 Score=51.75 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=67.1
Q ss_pred hhhhhhcccccCCHHHHHHHHHhccceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhhh
Q 038432 180 HTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVGA 259 (602)
Q Consensus 180 ~~l~~~~~f~~~s~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~l 259 (602)
..|.+...|+++-...++.++...+...++...++|+.||.+.+.|++++|.|-|... .+-+-.+||-.
T Consensus 37 ~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~gq---------i~mp~~~fgkr-- 105 (1283)
T KOG3542|consen 37 EQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEGQ---------IYMPYGCFGKR-- 105 (1283)
T ss_pred HHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeecc---------eecCccccccc--
Confidence 4667788899999999999999999999999999999999999999999999987641 22333345533
Q ss_pred hcCCCceeEEEEcceeEEEEe
Q 038432 260 LCCRPQIYTYRTKTLSQLLRL 280 (602)
Q Consensus 260 l~~~~~~~tv~a~~~~~l~~l 280 (602)
+|..+....-....++..++
T Consensus 106 -~g~~r~~nclllq~semivi 125 (1283)
T KOG3542|consen 106 -TGQNRTHNCLLLQESEMIVI 125 (1283)
T ss_pred -cccccccceeeecccceeee
Confidence 24445555555555665555
No 166
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.52 E-value=0.78 Score=34.60 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=25.4
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHC
Q 038432 448 LLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMN 500 (602)
Q Consensus 448 ~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ 500 (602)
.+..|+..|+.|+++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 345555556666666555443 111 3356666666666666666654
No 167
>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory. There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....
Probab=88.11 E-value=0.59 Score=40.54 Aligned_cols=96 Identities=16% Similarity=0.279 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHH
Q 038432 11 VRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFY 90 (602)
Q Consensus 11 i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~ 90 (602)
+++.+++.+-..+++.+.+....+ ..|-.. ..-...........++++...+++.-| ++..|++...|++.+++
T Consensus 4 vW~~il~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~q~-~~~~~~s~s~Ril~~~w 77 (148)
T PF00060_consen 4 VWLLILLSILLVSLVLWLFERFSP---YEWRKN--QSSPPRRWRFSLSNSFWYTFGTLLQQG-SSIRPRSWSGRILLAFW 77 (148)
T ss_dssp HHHHHHHHHHHHHTTGGGT-----------------------HHHHHHHHHHHCCCCCHHHH-H------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---hhhccc--cccccccCcccHHHHHHHHHHhhcccc-ccccccchHHHHHHHHH
Confidence 455555566666666665544321 112110 111122445677788888887777633 67899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 038432 91 MLFNLGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 91 ~~~g~~~~~~~i~~i~~~~~~~ 112 (602)
.+++.++.++..+.+..++...
T Consensus 78 ~l~~lil~~~Yta~L~s~Lt~~ 99 (148)
T PF00060_consen 78 WLFSLILIASYTANLTSFLTVP 99 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999888654
No 168
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]
Probab=87.76 E-value=0.09 Score=53.33 Aligned_cols=42 Identities=26% Similarity=0.542 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHH
Q 038432 57 YISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLT 98 (602)
Q Consensus 57 Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~ 98 (602)
.+.|+|+.++|++||||||..|--..-+++.++++.+..++.
T Consensus 218 lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~i 259 (1087)
T KOG3193|consen 218 LFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLI 259 (1087)
T ss_pred eeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhcc
Confidence 356899999999999999999976666666555554444433
No 169
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=87.33 E-value=0.92 Score=34.22 Aligned_cols=47 Identities=28% Similarity=0.231 Sum_probs=27.0
Q ss_pred hHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHHHhc
Q 038432 366 TPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRILYHC 436 (602)
Q Consensus 366 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~Ll~~ 436 (602)
..+..|+..|+.|+++.+++.+ .++ ...+..|+...+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~-----------------------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD-----------------------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH-----------------------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3456666666666666666543 111 1346666666666666666654
No 170
>PLN03223 Polycystin cation channel protein; Provisional
Probab=81.41 E-value=20 Score=41.90 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038432 85 IFIIFYMLFNLGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 85 ~~~~~~~~~g~~~~~~~i~~i~~~~~~~ 112 (602)
.|..+++++.+++.-++++.+..-+...
T Consensus 1398 YFfSFILLV~FILLNMFIAII~DSFsEV 1425 (1634)
T PLN03223 1398 YFYSYNIFVFMILFNFLLAIICDAFGEV 1425 (1634)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666666677777777777666544
No 171
>COG4709 Predicted membrane protein [Function unknown]
Probab=76.22 E-value=12 Score=33.27 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=53.8
Q ss_pred hHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh---hcchhHHHHhhC--CHHHHHHHHHHhhHhhhhhhcccccCCHHHH
Q 038432 122 SIEAASNFVGRNRLPPRLKKQILAYMCLRFKA---ESLNQHQLIEQL--PKSICKSICQHLFLHTVEKVYLFKDVSKEII 196 (602)
Q Consensus 122 ~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~~---~~~~~~~~l~~l--p~~l~~~v~~~~~~~~l~~~~~f~~~s~~~l 196 (602)
-++++++|+ .++|++.++++..+|+-.+.. .+.+|+|+..+| |.++-.|+..+.-.+....-|-+++.+...+
T Consensus 6 fL~eL~~yL--~~Lp~~~r~e~m~dyeehF~~a~~~GksE~EI~~~LG~P~eiA~ei~s~~~~k~~~~~~~~~n~~~aii 83 (195)
T COG4709 6 FLNELEQYL--EGLPREERREIMYDYEEHFREAQEAGKSEEEIAKDLGDPKEIAAEILSERGIKKEEVKPTQKNVRRAII 83 (195)
T ss_pred HHHHHHHHH--HhCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhCCHHHHHHHHHHHccchHHhccCcccchHHHHH
Confidence 466778888 479999999999998766655 356789999988 7777788877766666666666666555433
No 172
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=71.41 E-value=15 Score=38.86 Aligned_cols=99 Identities=18% Similarity=0.233 Sum_probs=70.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHH
Q 038432 8 HQDVRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFI 87 (602)
Q Consensus 8 ~~~i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~ 87 (602)
...+++.+.+.+|..|-..|.+-...+. +--.+.. .-.+++..-....+|||+-..+..-|.|+-+|++...+++.
T Consensus 569 qstLW~lv~~SVhvVal~lYlLDrfSPF-gRFk~~d---s~~~ee~alnlssAmWF~WGVLLNSGigEgtPRSfSARvLG 644 (993)
T KOG4440|consen 569 QSTLWLLVGLSVHVVALMLYLLDRFSPF-GRFKVND---SEEEEEDALNLSSAMWFSWGVLLNSGIGEGTPRSFSARVLG 644 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcc-cceeecc---CccchhhhcchhhhHHHHhHhhhccccCCCCCcchhHHHHH
Confidence 3455666888899999999988766443 2222221 11222334455678888888888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 038432 88 IFYMLFNLGLTAYLIGNMTNLVV 110 (602)
Q Consensus 88 ~~~~~~g~~~~~~~i~~i~~~~~ 110 (602)
++|.=+.+++.|...++++.++.
T Consensus 645 mVWaGFaMIiVASYTANLAAFLV 667 (993)
T KOG4440|consen 645 MVWAGFAMIIVASYTANLAAFLV 667 (993)
T ss_pred HHHhhhheeeehhhhhhhhhhee
Confidence 99988888888888888876553
No 173
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=65.17 E-value=8.2 Score=28.16 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=30.8
Q ss_pred eecCCCCeEEccCCCCC-eEEEEEEeEEEEEEeccCceeEEEEeCCCCee
Q 038432 206 EYIPPREDVIMQNEAPD-DVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMF 254 (602)
Q Consensus 206 ~~~~~g~~i~~~g~~~~-~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~f 254 (602)
..++||+..-..-.... .+++|++|++.+.. ++ + ...+++|+.+
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~-~~-~---~~~l~~Gd~~ 47 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTV-DG-E---RVELKPGDAI 47 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEE-TT-E---EEEEETTEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEE-cc-E---EeEccCCEEE
Confidence 35677776655555555 89999999999983 32 1 4567888755
No 174
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=64.35 E-value=29 Score=31.28 Aligned_cols=54 Identities=24% Similarity=0.493 Sum_probs=41.6
Q ss_pred hhHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh---hcchhHHHHhhC--CHHHHHHHHHH
Q 038432 121 NSIEAASNFVGRNRLPPRLKKQILAYMCLRFKA---ESLNQHQLIEQL--PKSICKSICQH 176 (602)
Q Consensus 121 ~~~~~~~~~m~~~~l~~~l~~ri~~y~~~~~~~---~~~~~~~~l~~l--p~~l~~~v~~~ 176 (602)
+-+++++++++ ++|++-++++.+||+-++.. ++.+++++.++| |.++-+++..+
T Consensus 5 efL~~L~~~L~--~lp~~e~~e~l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~~ 63 (181)
T PF08006_consen 5 EFLNELEKYLK--KLPEEEREEILEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILAE 63 (181)
T ss_pred HHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 34677888886 59999999999999877765 346789999997 66666666544
No 175
>PF13314 DUF4083: Domain of unknown function (DUF4083)
Probab=62.99 E-value=38 Score=23.61 Aligned_cols=47 Identities=6% Similarity=0.246 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh---HHHHhhhHHHHHhhh
Q 038432 84 MIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRR---TMEFRNSIEAASNFV 130 (602)
Q Consensus 84 ~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~---~~~~~~~~~~~~~~m 130 (602)
.++.+.+.++-+++++.+.+.+-.++.+.+.+ ....+++++++-+.+
T Consensus 6 ~Iy~~~Vi~l~vl~~~~Ftl~IRri~~~s~~kkq~~~~~eqKLDrIIeLL 55 (58)
T PF13314_consen 6 LIYYILVIILIVLFGASFTLFIRRILINSNAKKQDVDSMEQKLDRIIELL 55 (58)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 44555433333333333333343444332222 224666776666554
No 176
>KOG1054 consensus Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=57.63 E-value=7.5 Score=40.65 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCC
Q 038432 56 RYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRL 135 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l 135 (602)
.-..|+||++..++-.| -|+.|++..+++....+-++-.++.+...++++.++.- ++...-++.+.+..++.+|
T Consensus 595 gifNsLWFsLgAFMQQG-~DI~PRslSGRIvggvWWFFTlIIiSSYTANLAAFLTv-----ErMvsPIESaEDLAkQteI 668 (897)
T KOG1054|consen 595 GIFNSLWFSLGAFMQQG-CDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV-----ERMVSPIESAEDLAKQTEI 668 (897)
T ss_pred hhhHHHHHHHHHHHhcC-CCCCccccccceeccchhhhhhhhhhhhhhHHHHHHhH-----HhhcCcchhHHHHhhccee
Confidence 45679999999999888 79999999999988888777777766666666665532 1222334444444444444
No 177
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=56.03 E-value=3.9 Score=43.01 Aligned_cols=99 Identities=11% Similarity=-0.005 Sum_probs=64.3
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCCCCC--CCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcC
Q 038432 412 MNGNTALWEAISSKHHSIFRILYHCTAISDP--YTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAEN 489 (602)
Q Consensus 412 ~~g~tpLh~A~~~~~~~~~~~Ll~~g~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~ 489 (602)
..+.+.+|++...+. ...|+..+.+.+. ....++++..+.....+++..++.++...+.++.+|+|+||.+...+
T Consensus 104 ~~~a~~~~~~~~~~~---~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~ 180 (503)
T KOG0513|consen 104 RFGATDILWKFNLEK---APKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKE 180 (503)
T ss_pred cccccchhhhhhhcC---CCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCC
Confidence 456666766655433 3445555555552 45567788888888888888777777777777788999999998887
Q ss_pred cHHHHHHHHHCCCCcccCCCCCCChhhHHHHHH
Q 038432 490 NVEMVNFLVMNGSDVVGANKCEFSSTNLNDMLQ 522 (602)
Q Consensus 490 ~~~iv~~Ll~~ga~~~~~d~~g~t~l~~a~~~~ 522 (602)
+. ...+...+ -++.+|.++.....
T Consensus 181 ~~--~~~i~~ld-------l~~~~P~lf~~~~~ 204 (503)
T KOG0513|consen 181 NL--LVVIPCLD-------LKSLTPNLFSIYDA 204 (503)
T ss_pred Cc--ceEEEeec-------cCcCCceeeeeecc
Confidence 77 22222233 33367777654443
No 178
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=55.55 E-value=22 Score=26.48 Aligned_cols=30 Identities=30% Similarity=0.548 Sum_probs=23.3
Q ss_pred CeEEEEEEeEEEEEEeccCceeEEEEeCCCCeee
Q 038432 222 DDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFG 255 (602)
Q Consensus 222 ~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fG 255 (602)
+++.+|++|+|.+...++ ....+++||.|-
T Consensus 26 ~E~~~vleG~v~it~~~G----~~~~~~aGD~~~ 55 (74)
T PF05899_consen 26 DEFFYVLEGEVTITDEDG----ETVTFKAGDAFF 55 (74)
T ss_dssp EEEEEEEEEEEEEEETTT----EEEEEETTEEEE
T ss_pred CEEEEEEEeEEEEEECCC----CEEEEcCCcEEE
Confidence 778899999999987544 225788998773
No 179
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=54.68 E-value=72 Score=32.59 Aligned_cols=61 Identities=13% Similarity=0.315 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 038432 53 LWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGT 113 (602)
Q Consensus 53 ~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~ 113 (602)
..-.|+.++-|++..+.+++-++.......-..+++++.++.++.+.++|..+...++-.+
T Consensus 97 vLg~Figtfvy~l~~l~~i~~~~~~~~p~~~~~~a~~l~i~~v~~li~fI~~i~~~iqv~~ 157 (371)
T PF10011_consen 97 VLGTFIGTFVYSLLVLIAIRSGDYGSVPRLSVFIALALAILSVVLLIYFIHHIARSIQVSN 157 (371)
T ss_pred HHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 3456888999999999888766553333444778888888888899999988887665443
No 180
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=52.88 E-value=33 Score=27.82 Aligned_cols=44 Identities=16% Similarity=0.410 Sum_probs=33.2
Q ss_pred CCCChhHHHHHHHHHHHHHHhh-----------cchhHHHHhhCCHHHHHHHHHH
Q 038432 133 NRLPPRLKKQILAYMCLRFKAE-----------SLNQHQLIEQLPKSICKSICQH 176 (602)
Q Consensus 133 ~~l~~~l~~ri~~y~~~~~~~~-----------~~~~~~~l~~lp~~l~~~v~~~ 176 (602)
..+|.++|..|..++...-... ..+...++..||++||.+|...
T Consensus 51 ~ALP~diR~EVl~qe~~~~~~~~~~~~~~~~~~~~d~asflatl~p~LR~evL~~ 105 (108)
T PF14377_consen 51 AALPPDIREEVLAQERRERRRQERQQNARQHPQEMDNASFLATLPPELRREVLLD 105 (108)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCHHHHHHhCCHHHHHHHhhc
Confidence 3589999999999886544321 1344679999999999998653
No 181
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=52.59 E-value=12 Score=26.34 Aligned_cols=18 Identities=39% Similarity=0.935 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHhhccc
Q 038432 56 RYISAMYWSITTMTTVGY 73 (602)
Q Consensus 56 ~Y~~s~ywa~~t~~tvGy 73 (602)
+|+.++.|++.-.--+||
T Consensus 2 kyivt~fWs~il~~vvgy 19 (57)
T PF11151_consen 2 KYIVTFFWSFILGEVVGY 19 (57)
T ss_pred cEEehhHHHHHHHHHHHH
Confidence 688899999988877888
No 182
>PF07077 DUF1345: Protein of unknown function (DUF1345); InterPro: IPR009781 This family consists of several hypothetical bacterial proteins of around 230 residues in length. The function of this family is unknown.
Probab=49.14 E-value=1.7e+02 Score=26.38 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 038432 54 WIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIG 103 (602)
Q Consensus 54 ~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~ 103 (602)
-..|++-+|++++.-+|..-.|..+.+..-|-....=.+++.++++.+++
T Consensus 130 ~P~y~DFlYfsftiG~t~q~SDv~v~s~~~Rr~vl~hsllSF~Fnt~ilA 179 (180)
T PF07077_consen 130 EPDYWDFLYFSFTIGMTFQTSDVNVTSRRMRRLVLLHSLLSFFFNTVILA 179 (180)
T ss_pred CCCchhhhHHHHHHHhhccccCCCcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34799999999999999888999999998898888888888888887765
No 183
>PRK08156 type III secretion system protein SpaS; Validated
Probab=48.15 E-value=1.4e+02 Score=30.29 Aligned_cols=70 Identities=11% Similarity=0.024 Sum_probs=49.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
+......+..++..++..+..++++-.+..+..+.+...++.+-.-+++++-.++..-++.++.|+|+--
T Consensus 167 ~~~~~~~~~~~~~~l~~~~~~~~lvia~~D~~~Qr~~~~k~lkMSkqEvKdE~Ke~EGdP~iK~r~R~~~ 236 (361)
T PRK08156 167 IVGLIVIWRELLVKLVLTFLACALIVLILDFIAEYFLHMKDMKMDKQEVKREYKEQEGNPEIKSKRREAH 236 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3334444555555556666666666667777777777777777778888888899999999988888764
No 184
>PRK09108 type III secretion system protein HrcU; Validated
Probab=47.55 E-value=1.4e+02 Score=30.22 Aligned_cols=71 Identities=8% Similarity=0.114 Sum_probs=54.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 77 HAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 77 ~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
.+......++.++..++..+..++++-.+.++..+.+...++.+-.-+++++-+++..-+++++.|+|+--
T Consensus 173 ~~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvK~E~K~~EGdP~iK~rrRq~~ 243 (353)
T PRK09108 173 SPPDLAQILWTVLMKLLAVAAGVFLLVGAADWKIQRWLFIRDNRMSKDEVKREHKESEGDPHIKGERKRLA 243 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 34444555666677777777777777777788888887777777778888999999999999988887764
No 185
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=47.50 E-value=1.4e+02 Score=30.16 Aligned_cols=71 Identities=11% Similarity=0.157 Sum_probs=52.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMC 148 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~ 148 (602)
+......++..++.+++.+..++++-.+.++..+.+...++.+-..+++++-.++..-+++++.|+|+--+
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~rrR~~~r 242 (349)
T PRK12721 172 AACGLPVVSTLIFWLWGGLLACYLVFGILDYSFQRYKIMKQLKMSKDDVKQEYKDSEGDPEIKQKRRELQS 242 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 34444556666666666666666666677777787777777777788899999999999999988887643
No 186
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=47.05 E-value=64 Score=28.20 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=38.9
Q ss_pred CCCCeE-EccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhhhhcCCCceeEEEEcceeEEEEeeH
Q 038432 209 PPREDV-IMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVGALCCRPQIYTYRTKTLSQLLRLKT 282 (602)
Q Consensus 209 ~~g~~i-~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~~~~~~~tv~a~~~~~l~~l~~ 282 (602)
.||.-- +... ..+.+|++++|.+.+...++++ ...-.+++||+|=...-. +.+..+...+..+.+.+
T Consensus 36 Gpn~R~d~H~~-~tdE~FyqleG~~~l~v~d~g~-~~~v~L~eGd~flvP~gv-----pHsP~r~~~t~~LvIE~ 103 (159)
T TIGR03037 36 GPNARTDFHDD-PGEEFFYQLKGEMYLKVTEEGK-REDVPIREGDIFLLPPHV-----PHSPQRPAGSIGLVIER 103 (159)
T ss_pred CCCCCcccccC-CCceEEEEEcceEEEEEEcCCc-EEEEEECCCCEEEeCCCC-----CcccccCCCcEEEEEEe
Confidence 444333 3443 3688999999999996555433 234578999988443222 22233344555555544
No 187
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=46.02 E-value=80 Score=32.53 Aligned_cols=43 Identities=16% Similarity=0.395 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcccC--ccccccchhHHHHHHHHHHHHHH
Q 038432 55 IRYISAMYWSITTMTTVGYG--DLHAVNTVEMIFIIFYMLFNLGL 97 (602)
Q Consensus 55 ~~Y~~s~ywa~~t~~tvGyg--d~~~~~~~e~~~~~~~~~~g~~~ 97 (602)
.....+.+..+++++|.|+. |....+..-.++.+++|++|...
T Consensus 230 ~~~~~~~f~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIGg~~ 274 (390)
T TIGR00933 230 GALLLSAFFQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIGGCS 274 (390)
T ss_pred HHHHHHHHHHHhhccCCCccccChhhcCHHHHHHHHHHHHHcCCC
Confidence 35677889999999999995 44445566678888888888554
No 188
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=44.86 E-value=1.6e+02 Score=29.64 Aligned_cols=71 Identities=8% Similarity=0.072 Sum_probs=51.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMC 148 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~ 148 (602)
+......++..+..+++.+..++++-.+.++..+.+...++.+-..+++++-+++..-+++++.|+|+--+
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~r~R~~~r 241 (342)
T TIGR01404 171 LDGLAPIVGELLKLLILVCLGFFLVVGLADFAFQRYLFMKDLKMSKDEVKREYKEQEGDPEIKSKRRELHQ 241 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 33444455566666666666666666677777777777777777788889999999999999988887653
No 189
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=44.72 E-value=0.78 Score=48.07 Aligned_cols=104 Identities=16% Similarity=0.070 Sum_probs=58.3
Q ss_pred HHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChh
Q 038432 349 ELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHS 428 (602)
Q Consensus 349 ~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~ 428 (602)
.++....++|..-....++++..+.....+++..++..+..-...+ ..|.|+||.+...++.
T Consensus 121 ~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~-----------------~~g~t~L~~tl~~~~~- 182 (503)
T KOG0513|consen 121 KLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADARE-----------------VLGNTKLHLTLTKENL- 182 (503)
T ss_pred ccccccccccccccccccceeeeecCccccceeecccccccchhhh-----------------hcCCceeeeeccCCCc-
Confidence 3444444455444556677777777777777777766555544444 6788888888777665
Q ss_pred HHHHHHhcCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Q 038432 429 IFRILYHCTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDR 476 (602)
Q Consensus 429 ~~~~Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~ 476 (602)
+..+.-.+ ..+.+|+++.+..+..+-+-.++++++..++.|.
T Consensus 183 -~~~i~~ld-----l~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t 224 (503)
T KOG0513|consen 183 -LVVIPCLD-----LKSLTPNLFSIYDALGTKIVPLLDFKAIDICIDT 224 (503)
T ss_pred -ceEEEeec-----cCcCCceeeeeeccccccchhhhhhhhhhhhhcc
Confidence 22222222 2335666666655554433334444444444443
No 190
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=44.15 E-value=1.2e+02 Score=30.73 Aligned_cols=69 Identities=10% Similarity=0.064 Sum_probs=48.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAY 146 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y 146 (602)
+......++.++..++..+..++++-.+.++..+.+...++.+-..+++++-.++..-++.++.|+|+-
T Consensus 179 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEVKdE~Ke~EGdP~iK~rrR~~ 247 (359)
T PRK05702 179 LEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVKGRIRQL 247 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHH
Confidence 334445556666666666666666666667777777666666667778888888888888888777765
No 191
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=43.64 E-value=1.8e+02 Score=29.44 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=52.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
+......+...+..+++.++.++++-.+.++..+.+...++.+-..+++++-+++..-++.++.|+|+--
T Consensus 181 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMSkqEVKdE~Ke~EGdP~iK~r~Rq~~ 250 (358)
T PRK13109 181 PSQLPELILTVAIRLVSAVAIATIVLVALDLVWARFHWRRSLRMTKQEIKDEHKQAEGDPSVKARLRSLA 250 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3344455566666666677777777777788878877777777778889999999999999988888764
No 192
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=42.99 E-value=75 Score=27.30 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=36.7
Q ss_pred ccceecCCCCeEEccCC-CCCeEEEEEEeEEEEEEecc-CceeEEEEeCCCCeeeh
Q 038432 203 MKAEYIPPREDVIMQNE-APDDVYIIVSGEVEMIDYEM-EKEIAVGTLQTGDMFGE 256 (602)
Q Consensus 203 ~~~~~~~~g~~i~~~g~-~~~~ly~I~~G~v~i~~~~~-~~~~~~~~l~~g~~fGe 256 (602)
+....+.||...-..-- ....+++|++|+..+...+. +++.....+++||.+-.
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~i 87 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFVV 87 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEEE
Confidence 33456777776544432 35689999999999875433 34566778999997744
No 193
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=42.47 E-value=1.8e+02 Score=29.81 Aligned_cols=70 Identities=9% Similarity=-0.035 Sum_probs=49.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
|......+..++..++..+..++++-.+..+..+.+...++.+-..+++++-+++..-++.++.|+|+--
T Consensus 179 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvKdE~K~~EGdP~iK~r~Rq~~ 248 (386)
T PRK12468 179 PVAALGDALHLIIFCGLVVVLGLSPMVGFDVFYQITSHIKKLRMTKQDIRDEFKNQEGDPHVKGRIRQQQ 248 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3344444555555555566666666667777777777777777778888888899999999988887764
No 194
>PRK06771 hypothetical protein; Provisional
Probab=41.53 E-value=1.7e+02 Score=22.88 Aligned_cols=50 Identities=14% Similarity=0.284 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 98 TAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 98 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
|.|+...+..+....+.+....+.+++.+.+.+.--...+++..++++..
T Consensus 14 ~i~i~~~l~~~~~~~~~~~k~ie~~L~~I~~~~Gi~~~~~~~~~e~~~Li 63 (93)
T PRK06771 14 FIYIVEKLTKIEKKTDARLKRMEDRLQLITKEMGIVDREPPVNKELRQLM 63 (93)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHH
Confidence 34444555566566666777777777777777654444334455555543
No 195
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=41.37 E-value=2e+02 Score=29.02 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=51.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
+......+..++..++..+..++++-.+.++..+.+...++.+-..+++++-+++..-+++++.|+|+--
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lrMskqEVKdE~K~~EGdP~iK~rrR~~~ 241 (347)
T TIGR00328 172 LVQAITNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIRQMQ 241 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3334455666666666666666666677777777777777777778888888899999999988887753
No 196
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=41.08 E-value=7.6 Score=40.99 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=49.1
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCCcccCCCCCCCh
Q 038432 452 AEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSDVVGANKCEFSS 514 (602)
Q Consensus 452 A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~ 514 (602)
|+..+....+-.|++.|+.++..|..|.||+|+++..|..++.+.++..-.+.+.+-..|.++
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~~ 465 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMIA 465 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhccccccccc
Confidence 444555556666778899999999999999999999999999999987666655555555543
No 197
>PHA03029 hypothetical protein; Provisional
Probab=41.02 E-value=1.4e+02 Score=21.84 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=26.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhH
Q 038432 80 NTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRT 116 (602)
Q Consensus 80 ~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~ 116 (602)
+..|.+|-++..++-+++.-.++|.+-..+.+.++..
T Consensus 2 ~d~ei~~~ii~~iiyiilila~igiiwg~llsi~k~r 38 (92)
T PHA03029 2 DDAEIVFLIIAIIIYIILILAIIGIIWGFLLSINKIR 38 (92)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888777777777888777776666433
No 198
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=40.68 E-value=1.3e+02 Score=27.45 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=33.7
Q ss_pred ceecCCCCeE---------EccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeee
Q 038432 205 AEYIPPREDV---------IMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFG 255 (602)
Q Consensus 205 ~~~~~~g~~i---------~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fG 255 (602)
...+.||... +.+.....++|++++|+..+.-.+.+.+.....+.+|+.+-
T Consensus 72 ~t~l~PG~~g~e~~mt~gH~H~~~~~~EiyyvlsG~g~~~l~~~~G~~~~~~v~pGd~v~ 131 (191)
T PRK04190 72 TTRLYPGKVGDEYFMTKGHFHAKADRAEIYYGLKGKGLMLLQDPEGEARWIEMEPGTVVY 131 (191)
T ss_pred EEEECCCcEecccccCCCeEcCCCCCCEEEEEEeCEEEEEEecCCCcEEEEEECCCCEEE
Confidence 3556777743 33433446899999999988765443334566789998763
No 199
>KOG1052 consensus Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=39.44 E-value=1e+02 Score=34.40 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHH
Q 038432 10 DVRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIF 89 (602)
Q Consensus 10 ~i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~ 89 (602)
.+++.++..+=..+|+.+++.... +..| +.. +.....-....++|.++++++..| ++..|.+..-|++..+
T Consensus 343 ~vW~~i~~~~l~~~~~~~~~~~~~---~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~q~-~~~~p~~~~~Rll~~~ 413 (656)
T KOG1052|consen 343 EVWLLILASLLLVGLLLWILERLS---PYEL-PPR----QIVTSLFSLLNCLWLTVGSLLQQG-SDEIPRSLSTRLLLGA 413 (656)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc---cccC-Ccc----ccceeEeecccchhhhhHHHhccC-CCccccchhhhHHHHH
Confidence 455666777777788887776532 2334 211 111112223346677777777777 4588999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 038432 90 YMLFNLGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 90 ~~~~g~~~~~~~i~~i~~~~~~~ 112 (602)
+.+++.++.++..++++.++...
T Consensus 414 w~~~~lil~ssYTa~L~a~Lt~~ 436 (656)
T KOG1052|consen 414 WWLFVLILISSYTANLTAFLTVP 436 (656)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999998887654
No 200
>PRK06298 type III secretion system protein; Validated
Probab=38.36 E-value=2.6e+02 Score=28.38 Aligned_cols=66 Identities=12% Similarity=0.058 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 82 VEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 82 ~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
...+..++..++..+..++++-.+.++..+.+...++.+-..+++++-+++..-+++++.|+|+--
T Consensus 177 ~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvKdE~K~~EGdP~iK~rrR~~~ 242 (356)
T PRK06298 177 AQIFKEILYKAVTSIGIFFLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQIA 242 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 334444444445555555555566677777777777777778888888999999999988887764
No 201
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=38.23 E-value=3.5e+02 Score=30.70 Aligned_cols=97 Identities=11% Similarity=0.180 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCC-CCCccccccCCCCCCCchHHHHHHH--HHHHHHHHhhcccCccccccchhHHH
Q 038432 10 DVRFCDIILVHCAGCLYYLLADRYPH-KGETWLGSVNPNFTETSLWIRYISA--MYWSITTMTTVGYGDLHAVNTVEMIF 86 (602)
Q Consensus 10 ~i~~~~l~~~H~~aC~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~Y~~s--~ywa~~t~~tvGygd~~~~~~~e~~~ 86 (602)
.+++++++.+|..+-+-.++.++.+. ..+.-+.. +-.........-.| +-|+++-=-+|. --.|.....+++
T Consensus 565 svWVmmFVm~livaai~vFlFEy~SPvgyn~~l~~---gkkpggp~FtigkaiwllwaLvFnnsVp--v~nPKgtTskiM 639 (1258)
T KOG1053|consen 565 SVWVMMFVMCLIVAAITVFLFEYFSPVGYNRNLAN---GKKPGGPSFTIGKAIWLLWALVFNNSVP--VENPKGTTSKIM 639 (1258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccccccccC---CCCCCCcceehhhHHHHHHHHHhCCCcC--CCCCCchHHHHH
Confidence 35566777777777666666554322 22221111 11111111111223 347766544443 235677788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 038432 87 IIFYMLFNLGLTAYLIGNMTNLVVE 111 (602)
Q Consensus 87 ~~~~~~~g~~~~~~~i~~i~~~~~~ 111 (602)
..++.+++++|.|...++++.++.+
T Consensus 640 v~VWAfFavifLAsYTANLAAfMIq 664 (1258)
T KOG1053|consen 640 VLVWAFFAVIFLASYTANLAAFMIQ 664 (1258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999877643
No 202
>PF13623 SurA_N_2: SurA N-terminal domain
Probab=37.80 E-value=1.5e+02 Score=25.65 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-------------hHhHHHHhhhHHHHHhhhh
Q 038432 88 IFYMLFNLGLTAYLIGNMTNLVVEG-------------TRRTMEFRNSIEAASNFVG 131 (602)
Q Consensus 88 ~~~~~~g~~~~~~~i~~i~~~~~~~-------------~~~~~~~~~~~~~~~~~m~ 131 (602)
+++.++|..+||++++-+.+.-... .-...+|+.+++...+.++
T Consensus 10 lLi~vIglAL~aFIv~d~~~~~~~~~~~~~~VG~VnGe~Is~~ef~~~v~~~~~~~k 66 (145)
T PF13623_consen 10 LLIIVIGLALFAFIVGDFRSGSGFFGSSQNVVGEVNGEKISYQEFQQRVEQATENYK 66 (145)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcCCCCCeeEeECCEEcCHHHHHHHHHHHHHHHH
Confidence 5678899999999998764422211 1124567777777765543
No 203
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=35.23 E-value=33 Score=31.43 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=31.8
Q ss_pred HHHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHHCCCC
Q 038432 464 LVKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVMNGSD 503 (602)
Q Consensus 464 Ll~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~~ga~ 503 (602)
|+++|+--|..|....||=.+|.+.++.+..+.|++.|+.
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 4567787888888888888888888888888888887765
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=34.03 E-value=2.3e+02 Score=30.04 Aligned_cols=48 Identities=19% Similarity=0.578 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHH-HHHHHHHHhhcccCccccccchhHHHHHHHHH
Q 038432 17 ILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISA-MYWSITTMTTVGYGDLHAVNTVEMIFIIFYML 92 (602)
Q Consensus 17 ~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s-~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~ 92 (602)
++-+|..|+||..++ .|-..+.| ++|+... |+.......|.+.++...
T Consensus 125 ~~~~W~~~~FYv~~e---------------------lw~~~vvS~lFW~fan-------di~t~~qakRfy~l~~~g 173 (472)
T TIGR00769 125 ILRIWSFALFYVMAE---------------------LWGSVVLSLLFWGFAN-------QITTIDEAKRFYALFGLG 173 (472)
T ss_pred HHhhhhHHHHHHHHH---------------------HHHHHHHHHHHHHHHH-------hcCCHHHHHHHHHHHHHH
Confidence 344677777776553 34466777 8898876 566667778888877665
No 205
>COG2981 CysZ Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism]
Probab=33.83 E-value=4.1e+02 Score=24.97 Aligned_cols=66 Identities=21% Similarity=0.595 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFN 94 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g 94 (602)
++.+.-|++-.|+++.. .+.|+...-++.++ |.+++..++| ++..+.=
T Consensus 33 l~ni~L~~gl~~~~~~~-----~~~wid~Lm~~iPd---Wl~wLs~v~~------------------------~la~L~l 80 (250)
T COG2981 33 LLNILLWGGLFWLLFSQ-----ALPWIDTLMPGIPD---WLGWLSYLLW------------------------ILAVLLL 80 (250)
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHHHhhcCcc---HHHHHHHHHH------------------------HHHHHHH
Confidence 45555666666666654 35576543333332 3344433333 3333334
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 038432 95 LGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 95 ~~~~~~~i~~i~~~~~~~ 112 (602)
.+.++++++.+++++...
T Consensus 81 ll~~~~lfs~v~~~IAap 98 (250)
T COG2981 81 LLVFAFLFSTVANLIAAP 98 (250)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 555666666666666543
No 206
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=32.44 E-value=3.3e+02 Score=30.53 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=34.5
Q ss_pred hhCCHHHHHHHHHHhhHhhh-----hhhcccccCCHHHHHHHHHhcc
Q 038432 163 EQLPKSICKSICQHLFLHTV-----EKVYLFKDVSKEIIVLLVAKMK 204 (602)
Q Consensus 163 ~~lp~~l~~~v~~~~~~~~l-----~~~~~f~~~s~~~l~~l~~~~~ 204 (602)
..||+.||+.+..+...++. .+-.+++++|++....|+.++-
T Consensus 371 ~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~ 417 (727)
T KOG0498|consen 371 RQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLC 417 (727)
T ss_pred ccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHh
Confidence 47999999999988777664 4557889999999888888774
No 207
>PF07697 7TMR-HDED: 7TM-HD extracellular; InterPro: IPR011624 This entry represents the extracellular domain of the 7TM-HD (7TM Receptors with HD hydrolase) protein family []. These proteins are known or predicted, to posses metal-dependent phospohydrolase activity.
Probab=32.26 E-value=3.9e+02 Score=24.53 Aligned_cols=58 Identities=10% Similarity=0.226 Sum_probs=41.0
Q ss_pred hCCHHHHHHHHHHhhHhhhhhhccc-ccCCHHHHHHHHHhcccee--cCCCCeEEccCCCCC
Q 038432 164 QLPKSICKSICQHLFLHTVEKVYLF-KDVSKEIIVLLVAKMKAEY--IPPREDVIMQNEAPD 222 (602)
Q Consensus 164 ~lp~~l~~~v~~~~~~~~l~~~~~f-~~~s~~~l~~l~~~~~~~~--~~~g~~i~~~g~~~~ 222 (602)
.+|+. ...+...+...+++-.-+| ...++...........+.. +.+|+.|+++|+..+
T Consensus 147 ~~~~~-~~~~~~~l~~~~i~PNl~~d~~~T~~~~~~a~~~V~pv~~~V~~Ge~IV~kGe~VT 207 (222)
T PF07697_consen 147 NLPSE-LRELLKELLSNFIRPNLIYDEEATEKAREEALASVSPVRGMVKKGEVIVRKGEIVT 207 (222)
T ss_pred CCCHH-HHHHHHHHHHhcCCchhhcCHHHHHHHHHHHHhcCCchHhhccCCCEEecCCcEeC
Confidence 45555 4444455555554443344 3577888888899999888 999999999999754
No 208
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=31.45 E-value=1.1e+02 Score=25.55 Aligned_cols=48 Identities=15% Similarity=0.141 Sum_probs=30.5
Q ss_pred ceecCCCCeEEccCCCCCeEEEEEEeEEEEE-EeccCceeEEEEeCCCCeeeh
Q 038432 205 AEYIPPREDVIMQNEAPDDVYIIVSGEVEMI-DYEMEKEIAVGTLQTGDMFGE 256 (602)
Q Consensus 205 ~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~-~~~~~~~~~~~~l~~g~~fGe 256 (602)
...++||..+-..-.....+++|++|++.+. ..++ ....+.+||.+-.
T Consensus 39 ~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i~~g----~~~~L~aGD~i~~ 87 (125)
T PRK13290 39 ETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDLATG----EVHPIRPGTMYAL 87 (125)
T ss_pred EEEECCCCcccceeCCCEEEEEEEeCEEEEEEcCCC----EEEEeCCCeEEEE
Confidence 3467888654332212246999999999987 3222 2357899997753
No 209
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=31.07 E-value=44 Score=29.99 Aligned_cols=42 Identities=5% Similarity=0.094 Sum_probs=20.8
Q ss_pred cCHHHHHHHcCcHHHHH-HHHHCCCC----cccCCCCCCChhhHHHH
Q 038432 479 RTAIEIAMAENNVEMVN-FLVMNGSD----VVGANKCEFSSTNLNDM 520 (602)
Q Consensus 479 ~TpLh~A~~~~~~~iv~-~Ll~~ga~----~~~~d~~g~t~l~~a~~ 520 (602)
..|||-|+.-+..+++- ++++..+. +|..|.+|..+|++|..
T Consensus 223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALC 269 (280)
T ss_pred cchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHH
Confidence 34555555555555443 33344333 24455556666665543
No 210
>PF02037 SAP: SAP domain; InterPro: IPR003034 The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA binding domain found in diverse nuclear proteins involved in chromosomal organisation [], including in apoptosis []. In yeast, SAP is found in the most distal N-terminal region of E3 SUMO-protein ligase SIZ1, where it is involved in nuclear localization [].; GO: 0003676 nucleic acid binding; PDB: 2RNN_A 1JEQ_A 2KW9_A 2KVU_A 2DO1_A 1ZBU_B 1ZBH_A 2DO5_A 2RNO_A 1H1J_S ....
Probab=30.86 E-value=72 Score=19.69 Aligned_cols=26 Identities=8% Similarity=0.155 Sum_probs=18.6
Q ss_pred hHHHHHhhhhcCCCC-----hhHHHHHHHHH
Q 038432 122 SIEAASNFVGRNRLP-----PRLKKQILAYM 147 (602)
Q Consensus 122 ~~~~~~~~m~~~~l~-----~~l~~ri~~y~ 147 (602)
.+.++.++++.+++| .+|.+|+.+|+
T Consensus 5 ~v~eLk~~l~~~gL~~~G~K~~Li~Rl~~~l 35 (35)
T PF02037_consen 5 TVAELKEELKERGLSTSGKKAELIERLKEHL 35 (35)
T ss_dssp HHHHHHHHHHHTTS-STSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCCCCCCHHHHHHHHHHhC
Confidence 356777888888888 56778887774
No 211
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=30.61 E-value=1.2e+02 Score=27.16 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.0
Q ss_pred CCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehh
Q 038432 219 EAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEV 257 (602)
Q Consensus 219 ~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~ 257 (602)
+..+++|++++|.+.+...++++ ...-.+++||+|=-.
T Consensus 52 ~~tdE~FyqleG~~~l~v~d~g~-~~~v~L~eGd~fllP 89 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQEDGK-RRDVPIREGEMFLLP 89 (177)
T ss_pred CCCceEEEEECCeEEEEEEcCCc-eeeEEECCCCEEEeC
Confidence 45688999999998887654432 234578999988433
No 212
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=30.55 E-value=13 Score=39.43 Aligned_cols=56 Identities=27% Similarity=0.414 Sum_probs=44.1
Q ss_pred hhhcCcHHHHHHHHhcCCCCCCCCCCCchHHHHHHhcCChHHHHHHHhcccCCCch
Q 038432 338 VASTGNAAFLDELLKARLDPDIGDSKGRTPLHIAASKGHEECVLVLLKHASNVHLR 393 (602)
Q Consensus 338 A~~~g~~~~~~~Ll~~g~~~n~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~ 393 (602)
|+..+....+-.|++.|+.++..|..|.||+|+++..|..++.+.++....+.+..
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~ 458 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLK 458 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcc
Confidence 44455555555677788999999999999999999999999999998765554433
No 213
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=30.36 E-value=1.3e+02 Score=25.15 Aligned_cols=48 Identities=13% Similarity=0.261 Sum_probs=32.5
Q ss_pred hccceecCCCCeE-EccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCee
Q 038432 202 KMKAEYIPPREDV-IMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMF 254 (602)
Q Consensus 202 ~~~~~~~~~g~~i-~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~f 254 (602)
......+.||+-+ ..--...+.+|+|++|...+...+. ...+++||++
T Consensus 37 ~~~~~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~~~~-----~~~v~~gd~~ 85 (127)
T COG0662 37 SIARILVKPGEEISLHHHHHRDEHWYVLEGTGKVTIGGE-----EVEVKAGDSV 85 (127)
T ss_pred EEEEEEECCCcccCcccccCcceEEEEEeeEEEEEECCE-----EEEecCCCEE
Confidence 3445667777775 3334446889999999999986422 2356777765
No 214
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=29.91 E-value=1.4e+02 Score=30.45 Aligned_cols=52 Identities=8% Similarity=0.093 Sum_probs=34.1
Q ss_pred ceecCCCCeEEccCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeeh
Q 038432 205 AEYIPPREDVIMQNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGE 256 (602)
Q Consensus 205 ~~~~~~g~~i~~~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe 256 (602)
...+.||...-..--...++.++++|++++...+.+.+.....+++||.|-.
T Consensus 71 ~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~~~~~~L~~GD~~~f 122 (367)
T TIGR03404 71 NMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGRNYIDDVGAGDLWYF 122 (367)
T ss_pred EEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCcEEEeEECCCCEEEE
Confidence 3456666654332223467999999999998654433444558999998743
No 215
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=28.96 E-value=5.3e+02 Score=27.10 Aligned_cols=17 Identities=24% Similarity=0.278 Sum_probs=9.5
Q ss_pred eEEEEEEeEEEEEEecc
Q 038432 223 DVYIIVSGEVEMIDYEM 239 (602)
Q Consensus 223 ~ly~I~~G~v~i~~~~~ 239 (602)
++.++..|.+.+...-+
T Consensus 216 ~lkYl~~Ge~~~i~~ld 232 (443)
T PF04053_consen 216 HLKYLVNGETGIIAHLD 232 (443)
T ss_dssp EEEEEETTEEEEEEE-S
T ss_pred eEEEEEcCCcceEEEcC
Confidence 55456667666665443
No 216
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=28.75 E-value=1.3e+02 Score=25.18 Aligned_cols=49 Identities=12% Similarity=0.067 Sum_probs=36.7
Q ss_pred cceecCCCCeEEccCCC-CCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehh
Q 038432 204 KAEYIPPREDVIMQNEA-PDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEV 257 (602)
Q Consensus 204 ~~~~~~~g~~i~~~g~~-~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~ 257 (602)
....+.||..+-..--+ .+...+|++|.+++... + ....+.+||++-..
T Consensus 46 ~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~~-g----~~~~l~~Gd~i~ip 95 (131)
T COG1917 46 VLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQLE-G----EKKELKAGDVIIIP 95 (131)
T ss_pred EEEEECCCcccccccCCCcceEEEEEecEEEEEec-C----CceEecCCCEEEEC
Confidence 34668899888777665 67899999999999865 2 23467889987544
No 217
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=28.48 E-value=4.1e+02 Score=30.01 Aligned_cols=92 Identities=5% Similarity=0.062 Sum_probs=49.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCcccccc-----
Q 038432 6 NLHQDVRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVN----- 80 (602)
Q Consensus 6 ~~~~~i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~----- 80 (602)
|+.-.|...-++.+|++|++....-.... ..|- +.-...-....+.|+|.+++++...|+.-. |.+
T Consensus 449 k~L~~Iv~~Y~~~~~llG~i~l~~wi~~~---~~~~-----~~l~~~gin~~W~aiFhAVSAFnNAGFsL~-~dSM~~F~ 519 (800)
T TIGR00934 449 KCLCSIVLVYFLGFNILGFVLLLPWINHV---KTYS-----EVVRSKGVSPTWWGFFTAMSAFANLGLTLT-PESMVSFN 519 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ccHH-----HHHhhcCccHHHHHHHHHHHHHhcCCCCcC-CCcchhhc
Confidence 33334444577888998877764432111 1111 001111123566899999999999998532 322
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHH
Q 038432 81 --TVEMIFIIFYMLFNLGLTAYLIGNMT 106 (602)
Q Consensus 81 --~~e~~~~~~~~~~g~~~~~~~i~~i~ 106 (602)
..=.+..++.+++|.+.|..+.-.+.
T Consensus 520 ~~~~vllvm~~LIi~GntGFPVllrlii 547 (800)
T TIGR00934 520 KNSYLLLLMIWFIIIGNTGFPIFLRLII 547 (800)
T ss_pred cCccHHHHHHHHHHHcccchHHHHHHHH
Confidence 22233445556666666666655443
No 218
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=26.97 E-value=5.3e+02 Score=27.48 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhcccCccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 038432 59 SAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNM 105 (602)
Q Consensus 59 ~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i 105 (602)
.++-..+..+.++|||-+.|+ ......-+..+-+.+++++-+.+.+
T Consensus 281 ~Tlsr~LlLIVSlGYGIVkP~-Lg~~l~rv~~ig~~~~i~s~i~~l~ 326 (518)
T KOG2568|consen 281 KTLSRLLLLIVSLGYGIVKPT-LGGTLLRVCQIGVIYFIASEILGLA 326 (518)
T ss_pred HHHHHHHHHHHhcCcceEecC-cchHHHHHHHHhHHHHHHHHHHHHH
Confidence 466677778899999988874 2334444444334444444444433
No 219
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=26.25 E-value=4.1e+02 Score=29.26 Aligned_cols=71 Identities=10% Similarity=0.059 Sum_probs=52.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMC 148 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~~ 148 (602)
+......+...+..++..+..++++-.+.++..+.+...++.+-..+++++-+|+..-+++++.|+|+--+
T Consensus 435 ~~~~~~~~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMskqEvK~E~Ke~EGdP~iK~r~R~~~r 505 (609)
T PRK12772 435 LPYIITELKSLVISIFFRITLIMIIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIKAKIKQKQR 505 (609)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 33444455555666666666666666777777788877888888888999999999999999988887643
No 220
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=25.17 E-value=3.4e+02 Score=23.66 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=27.3
Q ss_pred cCCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeeehhh
Q 038432 217 QNEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFGEVG 258 (602)
Q Consensus 217 ~g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ 258 (602)
--...+++++|++|+..+...+. ...+++||+.|..+
T Consensus 60 ~Hs~edEfv~ILeGE~~l~~d~~-----e~~lrpGD~~gFpA 96 (161)
T COG3837 60 WHSAEDEFVYILEGEGTLREDGG-----ETRLRPGDSAGFPA 96 (161)
T ss_pred ccccCceEEEEEcCceEEEECCe-----eEEecCCceeeccC
Confidence 34456789999999998876433 34789999988653
No 221
>COG4325 Predicted membrane protein [Function unknown]
Probab=24.80 E-value=5.7e+02 Score=25.96 Aligned_cols=62 Identities=13% Similarity=0.337 Sum_probs=40.3
Q ss_pred CCCchHHHHHHHHHHHHHHHhhccc-----CccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038432 49 TETSLWIRYISAMYWSITTMTTVGY-----GDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEG 112 (602)
Q Consensus 49 ~~~~~~~~Y~~s~ywa~~t~~tvGy-----gd~~~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~ 112 (602)
........++-.|-+++..+.|+|- |-+.|. .-...++++.|+.+..+.|++-.++..++-.
T Consensus 125 ~nqvvLa~FlctFvysl~vlrtvg~e~d~~g~FIp~--~avtv~lLlaiisig~~iyfl~~l~~siq~~ 191 (464)
T COG4325 125 PNQVVLAIFLCTFVYSLGVLRTVGEERDGQGAFIPK--VAVTVSLLLAIISIGALIYFLHHLMHSIQID 191 (464)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhccCccccceeh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567888899999999999863 344443 2244555666666777777777766554433
No 222
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=24.77 E-value=51 Score=29.61 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=29.9
Q ss_pred hhHHHHHhcCCHHHHH-HHHHcCCC----CCCCCCCCcCHHHHHHHcC
Q 038432 447 DLLCTAEKRNDMSVME-ELVKYGLN----VDSKDRHGRTAIEIAMAEN 489 (602)
Q Consensus 447 t~L~~A~~~~~~~~~~-~Ll~~ga~----~n~~d~~g~TpLh~A~~~~ 489 (602)
.|||.|++-++.+++- |+++..+. .|..|.+|..+|.+|....
T Consensus 224 ~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 224 NPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred chhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 4677777777766654 45555443 4778899999999987654
No 223
>PF14802 TMEM192: TMEM192 family
Probab=24.71 E-value=3.7e+02 Score=25.38 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=46.8
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCchHHHHHHHHHHHHHHHhh------------
Q 038432 3 GLANLHQDVRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFTETSLWIRYISAMYWSITTMTT------------ 70 (602)
Q Consensus 3 ~~~~~~~~i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~t------------ 70 (602)
||..+.....+++.+++|+.-++--++.- |......+-.+......|..+.||.++-+.-
T Consensus 17 ~F~pl~Tv~~~~l~ll~~v~l~~~~~vl~--------~~~~~~~~~C~~y~iily~~v~lW~lt~l~d~y~k~~H~klr~ 88 (236)
T PF14802_consen 17 RFKPLPTVPIFSLLLLLSVVLAIVGFVLC--------WYPPPDEDKCDVYFIILYLHVALWLLTYLFDRYIKHQHQKLRL 88 (236)
T ss_pred CCcccChHHHHHHHHHHHHHHHHHHHHHh--------ccCCcccCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777788888844322222221 2221111111345677899999999987743
Q ss_pred cccCccccccchhHHHHHHHHHHHHHH
Q 038432 71 VGYGDLHAVNTVEMIFIIFYMLFNLGL 97 (602)
Q Consensus 71 vGygd~~~~~~~e~~~~~~~~~~g~~~ 97 (602)
-||-++.-.+..-+=....++-+|-.+
T Consensus 89 ~GY~~fyr~t~~~rr~Pl~ivS~gna~ 115 (236)
T PF14802_consen 89 QGYLDFYRKTKRLRRLPLQIVSLGNAV 115 (236)
T ss_pred CCHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 377666554443333333333333333
No 224
>COG3817 Predicted membrane protein [Function unknown]
Probab=24.06 E-value=1.5e+02 Score=27.93 Aligned_cols=27 Identities=22% Similarity=0.544 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccccc
Q 038432 54 WIRYISAMYWSITTMTTVGYGDLHAVNT 81 (602)
Q Consensus 54 ~~~Y~~s~ywa~~t~~tvGygd~~~~~~ 81 (602)
-.++-++.+|++..+|-+| ||..|.-.
T Consensus 30 p~r~~t~~FW~l~~~tFl~-g~~lp~~v 56 (313)
T COG3817 30 PVRFGTGLFWGLFSLTFLG-GDRLPNIV 56 (313)
T ss_pred CceecchHHHHHHHHHHhc-cccccchh
Confidence 3466789999999998888 77766533
No 225
>PRK12773 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=24.02 E-value=4.4e+02 Score=28.74 Aligned_cols=70 Identities=7% Similarity=0.011 Sum_probs=48.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHHH
Q 038432 78 AVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYM 147 (602)
Q Consensus 78 ~~~~~e~~~~~~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y~ 147 (602)
|......+..++..++..+..++++-.+..+.-+...-.++.+-..+++++-.++..-+|+++.|+|+--
T Consensus 470 ~~~il~~i~~ll~~Lvl~vllvllVIAiiD~~~QR~~f~KkLKMSKQEVKdE~KEsEGDPeIKaRRRqlq 539 (646)
T PRK12773 470 LEQAVALVMNSSFKIFLIVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRRQLA 539 (646)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3334445556666666666666666666677777777777777777888888888888888888877653
No 226
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=23.70 E-value=2e+02 Score=29.33 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=34.8
Q ss_pred ccceecCCCCeEEcc-CCCCCeEEEEEEeEEEEEEeccCceeEEEEeCCCCeee
Q 038432 203 MKAEYIPPREDVIMQ-NEAPDDVYIIVSGEVEMIDYEMEKEIAVGTLQTGDMFG 255 (602)
Q Consensus 203 ~~~~~~~~g~~i~~~-g~~~~~ly~I~~G~v~i~~~~~~~~~~~~~l~~g~~fG 255 (602)
+....+.||...-.. -...+++++|++|++++...+.+.......+++||.+-
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~~~~l~~GD~~~ 300 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNARTFDYQAGDVGY 300 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEEEEEECCCCEEE
Confidence 345667788765433 33457899999999988754332223445789999663
No 227
>PLN03218 maturation of RBCL 1; Provisional
Probab=23.33 E-value=3.9e+02 Score=31.78 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=17.6
Q ss_pred hHhhhcCcHHHHHHH----HhcCCCCCCCCCCCchHHHHHHhcCChHH
Q 038432 336 LTVASTGNAAFLDEL----LKARLDPDIGDSKGRTPLHIAASKGHEEC 379 (602)
Q Consensus 336 ~~A~~~g~~~~~~~L----l~~g~~~n~~d~~g~t~Lh~A~~~g~~~~ 379 (602)
...++.|+.+.+..+ .+.|..+|.. .-.+.+...+..|+.+-
T Consensus 622 ~ay~k~G~~deAl~lf~eM~~~Gv~PD~~--TynsLI~a~~k~G~~ee 667 (1060)
T PLN03218 622 NSCSQKGDWDFALSIYDDMKKKGVKPDEV--FFSALVDVAGHAGDLDK 667 (1060)
T ss_pred HHHHhcCCHHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCCCHHH
Confidence 334455555433333 3345444321 11233444455555543
No 228
>smart00511 ORANGE Orange domain. This domain confers specificity among members of the Hairy/E(SPL) family.
Probab=23.32 E-value=2.1e+02 Score=18.71 Aligned_cols=36 Identities=14% Similarity=0.345 Sum_probs=28.8
Q ss_pred HHHhhhHHHHHhhhhcC-CCChhHHHHHHHHHHHHHH
Q 038432 117 MEFRNSIEAASNFVGRN-RLPPRLKKQILAYMCLRFK 152 (602)
Q Consensus 117 ~~~~~~~~~~~~~m~~~-~l~~~l~~ri~~y~~~~~~ 152 (602)
.-|.+-+.++.+||... .+..+++.++.+++.....
T Consensus 5 ~Gy~~C~~Ev~~fLs~~~~~~~~~~~~Ll~HL~~~~~ 41 (45)
T smart00511 5 SGYRECANEVSRFLSQLPGTDPDVRARLLSHLQTHLN 41 (45)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 46788899999999865 5688899999999875443
No 229
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=22.26 E-value=9.6e+02 Score=26.84 Aligned_cols=202 Identities=13% Similarity=0.027 Sum_probs=0.0
Q ss_pred HHHHHHHHHhChHHHHHHHHHHHHhhhhhhcccccccccccCCCCCCCCCchhhhHhhhcCc----HHHHHHHHhcCCCC
Q 038432 282 TSALIEAMQSKQEDNVSILKNFLQQHKKLKDLNIGDLIAESGEEDGDPNMSVNLLTVASTGN----AAFLDELLKARLDP 357 (602)
Q Consensus 282 ~~~~~~~l~~~~~~~~~il~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A~~~g~----~~~~~~Ll~~g~~~ 357 (602)
..-+..+..............++....+.+..+....+.+.........-.+.+...++.|+ .++++.+++.|..+
T Consensus 143 ~~l~~~m~~~g~~~~~~~~n~Li~~y~k~g~~~~A~~lf~~m~~~~~~t~n~li~~~~~~g~~~~A~~lf~~M~~~g~~p 222 (697)
T PLN03081 143 KAVYWHVESSGFEPDQYMMNRVLLMHVKCGMLIDARRLFDEMPERNLASWGTIIGGLVDAGNYREAFALFREMWEDGSDA 222 (697)
T ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHhcCCCHHHHHHHHhcCCCCCeeeHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCC
Q ss_pred CCCCCCCchHHHHHHhcCChHHHHHH----HhcccCCCchhhHHHHhccchhHHHHhhccCCcHHHHHHHcCChhHHHHH
Q 038432 358 DIGDSKGRTPLHIAASKGHEECVLVL----LKHASNVHLRDYIIFMYNLSYDIIILLDMNGNTALWEAISSKHHSIFRIL 433 (602)
Q Consensus 358 n~~d~~g~t~Lh~A~~~g~~~~v~~L----l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~~~~~~~~~L 433 (602)
+.... .+.|..++..|..+..+.+ ++.|..++..- ..+-+..-+..|..+-+.-+
T Consensus 223 ~~~t~--~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~~~-------------------~n~Li~~y~k~g~~~~A~~v 281 (697)
T PLN03081 223 EPRTF--VVMLRASAGLGSARAGQQLHCCVLKTGVVGDTFV-------------------SCALIDMYSKCGDIEDARCV 281 (697)
T ss_pred ChhhH--HHHHHHHhcCCcHHHHHHHHHHHHHhCCCcccee-------------------HHHHHHHHHHCCCHHHHHHH
Q ss_pred HhcCCCCCCCCcchhHHHHHhcCC----HHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH----HHHHHHHHCCCCcc
Q 038432 434 YHCTAISDPYTAGDLLCTAEKRND----MSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV----EMVNFLVMNGSDVV 505 (602)
Q Consensus 434 l~~g~~~~~~~g~t~L~~A~~~~~----~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~----~iv~~Ll~~ga~~~ 505 (602)
++.-...+...-++.+..-+..|. .++.+.+.+.|..+|..... +.+...+..|.. ++.+.+++.|..++
T Consensus 282 f~~m~~~~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t~~--~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d 359 (697)
T PLN03081 282 FDGMPEKTTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSIDQFTFS--IMIRIFSRLALLEHAKQAHAGLIRTGFPLD 359 (697)
T ss_pred HHhCCCCChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHHH--HHHHHHHhccchHHHHHHHHHHHHhCCCCC
Q ss_pred c
Q 038432 506 G 506 (602)
Q Consensus 506 ~ 506 (602)
.
T Consensus 360 ~ 360 (697)
T PLN03081 360 I 360 (697)
T ss_pred e
No 230
>PF14841 FliG_M: FliG middle domain; PDB: 3HJL_A 3AJC_A 1LKV_X 3SOH_D 3USY_B 3USW_A.
Probab=22.12 E-value=1.6e+02 Score=22.23 Aligned_cols=40 Identities=18% Similarity=0.392 Sum_probs=28.6
Q ss_pred HHHHhhCCHHHHHHHHHHhhHhhhhhhcccccCCHHHHHHHHHhccce
Q 038432 159 HQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAE 206 (602)
Q Consensus 159 ~~~l~~lp~~l~~~v~~~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~~ 206 (602)
.+++..||+.+|.++.. ++.-+..++++.+..+...++..
T Consensus 30 A~VL~~lp~e~r~~v~~--------Ria~~~~v~~~~i~~ie~~L~~~ 69 (79)
T PF14841_consen 30 AEVLSQLPEELRAEVVR--------RIARLESVSPEVIEEIEEVLEEK 69 (79)
T ss_dssp HHHHHTS-HHHHHHHHH--------HHHTCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHH--------HHHccCCCCHHHHHHHHHHHHHH
Confidence 46778888887777644 45567888999998888777643
No 231
>COG4291 Predicted membrane protein [Function unknown]
Probab=22.10 E-value=6.1e+02 Score=23.14 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCC---CCCccccccCCCCCCCchHHHHHHHHHHHHHHHhhcccCccccccchhHHHHHHHH
Q 038432 15 DIILVHCAGCLYYLLADRYPH---KGETWLGSVNPNFTETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYM 91 (602)
Q Consensus 15 ~l~~~H~~aC~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~Y~~s~ywa~~t~~tvGygd~~~~~~~e~~~~~~~~ 91 (602)
-.+++|-..-+.|.--.+.+. ....-+.+. . ..+......|++-+|++.+.-.|---.|..-.|..-|=....=.
T Consensus 128 gWltIh~m~alHYAhlYw~~a~~d~~~~~~~rg-~-~fp~~~~P~g~DFLYfs~vIgMTaQtsDtnitT~aMRr~~L~hs 205 (228)
T COG4291 128 GWLTIHMMTALHYAHLYWRPAGDDPGEKPIKRG-L-DFPETPEPDGWDFLYFSFVIGMTAQTSDTNITTTAMRRVVLLHS 205 (228)
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCcccCC-C-CCCCCCCCCccchhhhhHhhhhheeccccccCcHHHHHHHHHHH
Confidence 566777777776654433211 111222221 0 11223345789999999987666555777777777777777777
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038432 92 LFNLGLTAYLIGNMTNL 108 (602)
Q Consensus 92 ~~g~~~~~~~i~~i~~~ 108 (602)
+++.+|...++..-.+.
T Consensus 206 ilSFFFNtvivAaaVN~ 222 (228)
T COG4291 206 ILSFFFNTVIVAAAVNA 222 (228)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777776654443
No 232
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=21.89 E-value=5.8e+02 Score=26.19 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhcccCcccc------ccchhHHHHHHHHHHHHHHHHHHH
Q 038432 55 IRYISAMYWSITTMTTVGYGDLHA------VNTVEMIFIIFYMLFNLGLTAYLI 102 (602)
Q Consensus 55 ~~Y~~s~ywa~~t~~tvGygd~~~------~~~~e~~~~~~~~~~g~~~~~~~i 102 (602)
..+++|++.++++++|-|+.-... .+..-.++.++.|++|.+-|....
T Consensus 127 ~~~~~Aif~avSa~~taGFs~~~~~~~~~~~~~~i~~v~~~lm~iGg~gF~v~~ 180 (390)
T TIGR00933 127 MPLFDAIFHSISAFNNGGFSTHSDSSIGYFHDPSVNLVIAFLIILGGLGFTVHY 180 (390)
T ss_pred hHHHHHHHHHHHHHhcCCcCCCCCcchhhccChHHHHHHHHHHHHHhcCHHHHH
Confidence 368899999999999999854332 122234566777777777776654
No 233
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=21.86 E-value=7.6e+02 Score=24.18 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhhHhHHHHhhhHHHHHhhhhcCCCChhHHHHHHHH
Q 038432 97 LTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAY 146 (602)
Q Consensus 97 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~m~~~~l~~~l~~ri~~y 146 (602)
.++|+...+..+..+....-++.+-.-+++.+-.++..-+++++.+=|++
T Consensus 192 ~~~ylv~sv~Dy~fqr~~~~K~lkMSKdEVkRE~Kd~eG~PeiKskRRq~ 241 (349)
T COG4792 192 AVGYLVFSVADYAFQRYQILKELKMSKDEVKREYKDMEGDPEIKSKRRQL 241 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHhcccCCchhhHHHHHH
Confidence 55566666666655555555555555566666666666666665544433
No 234
>PLN03077 Protein ECB2; Provisional
Probab=21.35 E-value=9e+02 Score=27.92 Aligned_cols=65 Identities=15% Similarity=0.082 Sum_probs=34.1
Q ss_pred HHhcCCCCCCCCcchhHHHHHhcCCHHHHHHH----HHcCCCCCCCCCCCcCHHHHHHHcCcHHHHHHHHH
Q 038432 433 LYHCTAISDPYTAGDLLCTAEKRNDMSVMEEL----VKYGLNVDSKDRHGRTAIEIAMAENNVEMVNFLVM 499 (602)
Q Consensus 433 Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~L----l~~ga~~n~~d~~g~TpLh~A~~~~~~~iv~~Ll~ 499 (602)
+.+.|..++...-.+.+...+..|..+....+ .+.|...+.. -.++-+..-++.|+.+-+.-+++
T Consensus 380 M~~~g~~Pd~~t~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~vf~ 448 (857)
T PLN03077 380 MEQDNVSPDEITIASVLSACACLGDLDVGVKLHELAERKGLISYVV--VANALIEMYSKCKCIDKALEVFH 448 (857)
T ss_pred HHHhCCCCCceeHHHHHHHHhccchHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHHHcCCHHHHHHHHH
Confidence 34456556655555566666666665544333 3445443321 12234455566677766665555
No 235
>CHL00038 psbL photosystem II protein L
Probab=21.34 E-value=63 Score=20.09 Aligned_cols=11 Identities=18% Similarity=0.857 Sum_probs=8.7
Q ss_pred HHHHHHHHHHh
Q 038432 59 SAMYWSITTMT 69 (602)
Q Consensus 59 ~s~ywa~~t~~ 69 (602)
+|+||+...+.
T Consensus 16 TSLy~GLLlif 26 (38)
T CHL00038 16 TSLYWGLLLIF 26 (38)
T ss_pred hhHHHHHHHHH
Confidence 79999887654
No 236
>PF10330 Stb3: Putative Sin3 binding protein; InterPro: IPR018818 This entry represents Sin3 binding proteins conserved in fungi. Sin3p does not bind DNA directly even though the yeast SIN3 gene functions as a transcriptional repressor. Sin3p is part of a large multiprotein complex []. Stb3 appears to bind directly to ribosomal RNA Processing Elements (RRPE) although there are no obvious domains which would accord with this, implying that Stb3 may be a novel RNA-binding protein [].
Probab=21.29 E-value=1.7e+02 Score=22.67 Aligned_cols=30 Identities=20% Similarity=0.058 Sum_probs=22.4
Q ss_pred HhhHhhhhhhcccccCCHHHHHHHHHhccc
Q 038432 176 HLFLHTVEKVYLFKDVSKEIIVLLVAKMKA 205 (602)
Q Consensus 176 ~~~~~~l~~~~~f~~~s~~~l~~l~~~~~~ 205 (602)
++...+-.++|-|+.+|+.-.+.|+...-+
T Consensus 25 hI~~~Lt~~vPgF~~ls~sKqRRLi~~ALE 54 (92)
T PF10330_consen 25 HITGYLTTSVPGFSDLSPSKQRRLIMAALE 54 (92)
T ss_pred HHHHHHhccCCCcccCCHHHHHHHHHHHHh
Confidence 555567789999999999877776655433
No 237
>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ]. In fz mutants, the orientation of individual hairs with respect both to their neighbours and to the organism as a whole is altered. In the wild-type wing, all hairs point towards the distal tip []. In the developing wing, fz has 2 functions: it is required for the proximal-distal transmission of an intracellular polarity signal; and it is required for cells to respond to the polarity signal. Fz produces an mRNA that encodes an integral membrane protein with 7 putative transmembrane (TM) domains. This protein should contain both extracellular and cytoplasmic domains, which could function in the transmission and interpretation of polarity information []. This signature is usually found downstream of the Fz domain (IPR000024 from INTERPRO); GO: 0007166 cell surface receptor linked signaling pathway, 0016020 membrane
Probab=21.16 E-value=3.9e+02 Score=26.77 Aligned_cols=55 Identities=20% Similarity=0.372 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCC--CCchHHHHHHHHHHHHHHHhhc
Q 038432 11 VRFCDIILVHCAGCLYYLLADRYPHKGETWLGSVNPNFT--ETSLWIRYISAMYWSITTMTTV 71 (602)
Q Consensus 11 i~~~~l~~~H~~aC~~~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~Y~~s~ywa~~t~~tv 71 (602)
+.|.+++.+-..|++|+.+... +|.-+...... .-+...+|+...-|++=...|+
T Consensus 96 ~~F~l~Yyf~mAa~~WWviLt~------~W~lsa~~kw~~e~i~~~s~yfH~~aW~iP~~~ti 152 (328)
T PF01534_consen 96 VVFLLLYYFGMAASLWWVILTL------TWFLSAGLKWGSEAIEKKSSYFHLVAWGIPAVLTI 152 (328)
T ss_pred hHHHHHHHHHhHHHHHHHHHHH------HHHHHhhcccCcchhhhhcchhhhHHhhhhHHHHH
Confidence 4566777777889999988743 23322111111 1134568999999987655443
No 238
>PF03891 DUF333: Domain of unknown function (DUF333); InterPro: IPR005590 This family consists of bacterial proteins whose function has not been characterised.
Probab=20.32 E-value=2.4e+02 Score=19.25 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=27.5
Q ss_pred EeEEEEEEeccCceeEEEEeCCCCeeehhhhhcC
Q 038432 229 SGEVEMIDYEMEKEIAVGTLQTGDMFGEVGALCC 262 (602)
Q Consensus 229 ~G~v~i~~~~~~~~~~~~~l~~g~~fGe~~ll~~ 262 (602)
-|++++....++.+.-+..|..|+...|.+++.+
T Consensus 15 GG~~~~~~~~~G~~~g~C~lpdG~~~~eW~l~r~ 48 (50)
T PF03891_consen 15 GGKLEIRKQPDGSQVGYCVLPDGRRCEEWALYRG 48 (50)
T ss_pred CCEEEEEEcCCCCeEeEEECCCCCEEeHHHHhhc
Confidence 3578887776666788999999999999888764
No 239
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=20.25 E-value=2.6e+02 Score=29.39 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=41.0
Q ss_pred HHHHHcCChhHHHHHHhcCCCCCCCCcchhHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHcCcH-HHHHHH
Q 038432 419 WEAISSKHHSIFRILYHCTAISDPYTAGDLLCTAEKRNDMSVMEELVKYGLNVDSKDRHGRTAIEIAMAENNV-EMVNFL 497 (602)
Q Consensus 419 h~A~~~~~~~~~~~Ll~~g~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~n~~d~~g~TpLh~A~~~~~~-~iv~~L 497 (602)
..|...|+.++++.-.++..|.+ ..+.+....|+.+-++.|.+.-. .-.+-+.+++.|...|+. +++++|
T Consensus 355 ~~AL~~g~~~lAe~c~~k~~d~~-----~L~lLy~~~g~~~~L~kl~~~a~----~~~~~n~af~~~~~lgd~~~cv~lL 425 (443)
T PF04053_consen 355 DEALRQGNIELAEECYQKAKDFS-----GLLLLYSSTGDREKLSKLAKIAE----ERGDINIAFQAALLLGDVEECVDLL 425 (443)
T ss_dssp HHHHHTTBHHHHHHHHHHCT-HH-----HHHHHHHHCT-HHHHHHHHHHHH----HTT-HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhhcCcc-----ccHHHHHHhCCHHHHHHHHHHHH----HccCHHHHHHHHHHcCCHHHHHHHH
Confidence 45666777777777666544332 44556666677666666653210 001224566677666665 577777
Q ss_pred HHCC
Q 038432 498 VMNG 501 (602)
Q Consensus 498 l~~g 501 (602)
++.|
T Consensus 426 ~~~~ 429 (443)
T PF04053_consen 426 IETG 429 (443)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 7664
No 240
>COG5559 Uncharacterized conserved small protein [Function unknown]
Probab=20.06 E-value=1.1e+02 Score=21.35 Aligned_cols=23 Identities=26% Similarity=0.504 Sum_probs=18.4
Q ss_pred hcCCCChhHHHHHHHHHHHHHHh
Q 038432 131 GRNRLPPRLKKQILAYMCLRFKA 153 (602)
Q Consensus 131 ~~~~l~~~l~~ri~~y~~~~~~~ 153 (602)
...++|.+|++.+..|.+|....
T Consensus 7 lfqkLPDdLKrEvldY~EfLlek 29 (65)
T COG5559 7 LFQKLPDDLKREVLDYIEFLLEK 29 (65)
T ss_pred HHHHCcHHHHHHHHHHHHHHHHH
Confidence 34578999999999999887754
Done!