Query 038434
Match_columns 126
No_of_seqs 103 out of 1013
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 19:08:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038434.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038434hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 99.9 7.3E-27 2.5E-31 191.1 11.3 111 1-125 14-124 (439)
2 2e1v_A Acyl transferase; BAHD 99.9 7.6E-27 2.6E-31 191.4 10.7 121 1-126 13-134 (454)
3 2xr7_A Malonyltransferase; xen 99.9 5.3E-27 1.8E-31 192.0 8.4 121 1-126 8-129 (453)
4 2bgh_A Vinorine synthase; VS, 99.9 3.9E-24 1.3E-28 174.2 9.8 113 1-125 11-123 (421)
5 2rkv_A Trichothecene 3-O-acety 99.7 1.3E-16 4.6E-21 129.9 7.0 89 15-109 4-102 (451)
6 3u5c_Q RP61R, 40S ribosomal pr 28.2 28 0.00096 24.2 1.9 18 51-68 77-94 (143)
7 1u0j_A DNA replication protein 21.3 82 0.0028 23.8 3.5 33 31-75 104-136 (267)
8 3j20_K 30S ribosomal protein S 21.1 52 0.0018 22.6 2.1 18 51-68 74-91 (135)
9 2vqe_I 30S ribosomal protein S 20.0 61 0.0021 22.1 2.3 19 51-69 73-91 (128)
10 2kl8_A OR15; structural genomi 19.4 1.5E+02 0.0051 18.1 3.7 38 51-88 11-48 (85)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=99.94 E-value=7.3e-27 Score=191.15 Aligned_cols=111 Identities=25% Similarity=0.326 Sum_probs=93.3
Q ss_pred CeeeCCCCCCCCCceeeCCccccccCCCCCccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEecCCCCC
Q 038434 1 SKISPPSSDSVTASTLPLTYFDTLWLKFPPSERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIMWPADSA 80 (126)
Q Consensus 1 ~~V~Ps~~t~~~~~~l~LS~lD~~~~~~~~v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~~~~~~g 80 (126)
++|+|+.|| + .+.++||+||+.+ ...|++.||||+.+. .. . ...+++||+|||++|++||||||||++.++ |
T Consensus 14 ~~V~P~~~t-p-~~~~~LS~lD~~~-~~~~~~~~~~y~~~~-~~-~--~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~-g 85 (439)
T 4g22_A 14 TMVRPAQET-P-GRNLWNSNVDLVV-PNFHTPSVYFYRPTG-SS-N--FFDAKVLKDALSRALVPFYPMAGRLKRDED-G 85 (439)
T ss_dssp EEECCSSCC-C-CCEECCCHHHHSC-CTTCCCEEEEECCCS-CT-T--TTCHHHHHHHHHHHTTTTGGGGCEEEECTT-S
T ss_pred EEEeCCCCC-C-CCeecCChhHhCc-cccceeeEEEEcCCC-Cc-c--ccHHHHHHHHHHHHHhhccccceeeeeCCC-C
Confidence 479999999 4 6789999999974 567999999999754 21 2 235899999999999999999999998765 9
Q ss_pred CcEEEecCCCCCceEEEEEEeCCCcccccCCCCCCchhhccCCCC
Q 038434 81 KPAIYYFPDQNDGVSFTVAESDADFSHLSGNNGNREAVEFHHLTP 125 (126)
Q Consensus 81 ~~~I~c~~~~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~Lvp 125 (126)
+++|+||+ +||.|+||++|++++++ ++ . .+...+++|+|
T Consensus 86 ~~~i~c~~---~Gv~fv~A~~d~~l~~l-~~-~-~p~~~~~~l~p 124 (439)
T 4g22_A 86 RIEIECNG---EGVLFVEAESDGVVDDF-GD-F-APTLELRRLIP 124 (439)
T ss_dssp CEEEECCC---CCEEEEEEEESSCGGGG-TT-C-CCCGGGGGGSC
T ss_pred CEEEEECC---CCCEEEEEEcCCcHHHh-cC-C-CCCHHHHhcCC
Confidence 99999988 99999999999999999 44 2 24456788877
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.94 E-value=7.6e-27 Score=191.37 Aligned_cols=121 Identities=38% Similarity=0.749 Sum_probs=98.1
Q ss_pred CeeeCCCCCCCCCceeeCCccccccCCCCCccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEe-cCCCC
Q 038434 1 SKISPPSSDSVTASTLPLTYFDTLWLKFPPSERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIM-WPADS 79 (126)
Q Consensus 1 ~~V~Ps~~t~~~~~~l~LS~lD~~~~~~~~v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~-~~~~~ 79 (126)
++|+|+.+|++ .+.++||+||+.++.+.|++.+|||+.+. ...+|.++.+++||+||+++|++||||||||+ +.+++
T Consensus 13 ~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~ 90 (454)
T 2e1v_A 13 SQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPI-TRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPT 90 (454)
T ss_dssp EEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCC-CHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSS
T ss_pred EEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCC-CcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCC
Confidence 57999988644 78999999999876667999999999654 21111145799999999999999999999998 76456
Q ss_pred CCcEEEecCCCCCceEEEEEEeCCCcccccCCCCCCchhhccCCCCC
Q 038434 80 AKPAIYYFPDQNDGVSFTVAESDADFSHLSGNNGNREAVEFHHLTPQ 126 (126)
Q Consensus 80 g~~~I~c~~~~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~Lvp~ 126 (126)
|+++|+||+ ++||.|+||+++.+++++.++ ...+...+++|+|.
T Consensus 91 g~~~i~c~~--~~gv~fv~A~~~~~l~~l~~~-~~~~~~~~~~l~p~ 134 (454)
T 2e1v_A 91 KKPEICYVE--GDSVAVTFAECNLDLNELTGN-HPRNCDKFYDLVPI 134 (454)
T ss_dssp SCCEEEECT--TCCEEEEEEEECSCGGGTSSS-SCEEGGGGGGGSCC
T ss_pred CCEEEEECC--CCcEEEEEEEeCCCHHHhcCC-CCCcchhhhcCCCC
Confidence 999999995 499999999999999999765 33455667888773
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.94 E-value=5.3e-27 Score=192.04 Aligned_cols=121 Identities=42% Similarity=0.732 Sum_probs=98.3
Q ss_pred CeeeCCCCCCCCCceeeCCccccccCCCCCccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEecCCC-C
Q 038434 1 SKISPPSSDSVTASTLPLTYFDTLWLKFPPSERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIMWPAD-S 79 (126)
Q Consensus 1 ~~V~Ps~~t~~~~~~l~LS~lD~~~~~~~~v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~~~~~-~ 79 (126)
++|+|+.+|++ .+.++||+||+.++.+.|++.+|||+.+. ...+|.++.+++||+||+++|++||||||||++.++ +
T Consensus 8 ~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~ 85 (453)
T 2xr7_A 8 CQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPI-SRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWS 85 (453)
T ss_dssp SCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCC-CSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTT
T ss_pred EEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCC-CCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCC
Confidence 57999988644 78999999999866667999999999654 211111457999999999999999999999998653 6
Q ss_pred CCcEEEecCCCCCceEEEEEEeCCCcccccCCCCCCchhhccCCCCC
Q 038434 80 AKPAIYYFPDQNDGVSFTVAESDADFSHLSGNNGNREAVEFHHLTPQ 126 (126)
Q Consensus 80 g~~~I~c~~~~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~Lvp~ 126 (126)
|+++|+||+ ++||.|+||+++.+++++.++ ...+...+++|+|.
T Consensus 86 g~~~i~c~~--~~gv~fv~A~~~~~l~~l~~~-~~~~~~~~~~l~p~ 129 (453)
T 2xr7_A 86 GYPELRYVT--GNSVSVIFSESDMDFNYLIGY-HPRNTKDFYHFVPQ 129 (453)
T ss_dssp CCCEEEEET--TCCCEEEEEECCSCHHHHTCS-SCCCGGGGGGGSCC
T ss_pred CCEEEEecC--CCceEEEEEecCCCHHHhhcc-CCCChhhhhcCCCC
Confidence 899999995 599999999999999999765 33456677888773
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.90 E-value=3.9e-24 Score=174.15 Aligned_cols=113 Identities=24% Similarity=0.236 Sum_probs=90.3
Q ss_pred CeeeCCCCCCCCCceeeCCccccccCCCCCccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEecCCCCC
Q 038434 1 SKISPPSSDSVTASTLPLTYFDTLWLKFPPSERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIMWPADSA 80 (126)
Q Consensus 1 ~~V~Ps~~t~~~~~~l~LS~lD~~~~~~~~v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~~~~~~g 80 (126)
++|+|+.|||.+.+.++||+||+.. ...|++.+|||+.+.....++ ...+++||+||+++|++||||||||+ +
T Consensus 11 ~~V~P~~ptp~~~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~~~~~~-~~~~~~Lk~sLs~~L~~~~plAGRl~-----~ 83 (421)
T 2bgh_A 11 ELILPSSPTPQSLKCYKISHLDQLL-LTCHIPFILFYPNPLDSNLDP-AQTSQHLKQSLSKVLTHFYPLAGRIN-----V 83 (421)
T ss_dssp EEEECSSCCCTTSCCCBCCHHHHTS-CSSEEEEEEEECCCSSCCCCH-HHHHHHHHHHHHHHTTTSGGGGSEEE-----T
T ss_pred EEEeCCCCCCCCCcccCCChHHhcc-cccccceEEEEeCCCccccch-hhHHHHHHHHHHHHhhhcchhccccC-----C
Confidence 4799999985334689999999974 467999999999654110111 35799999999999999999999997 3
Q ss_pred CcEEEecCCCCCceEEEEEEeCCCcccccCCCCCCchhhccCCCC
Q 038434 81 KPAIYYFPDQNDGVSFTVAESDADFSHLSGNNGNREAVEFHHLTP 125 (126)
Q Consensus 81 ~~~I~c~~~~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~Lvp 125 (126)
+++|+||+ +||.|+||++|++++++... . .+...+++|+|
T Consensus 84 ~~~i~c~~---~Gv~fv~A~~d~~l~~~~~~-~-p~~~~~~~l~p 123 (421)
T 2bgh_A 84 NSSVDCND---SGVPFVEARVQAQLSQAIQN-V-VELEKLDQYLP 123 (421)
T ss_dssp TTEEECCC---CCEEEEEEEESSCHHHHHSC-C-SSGGGGGGGSS
T ss_pred CcEEEEcC---CceEEEEEEEcCCHHHHhcc-C-CChHHHHhcCC
Confidence 69999998 99999999999999999654 2 23346777776
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.65 E-value=1.3e-16 Score=129.93 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=70.3
Q ss_pred eeeCCccccccC-CCCCccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEecCC----CCCCcEEEecCC
Q 038434 15 TLPLTYFDTLWL-KFPPSERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIMWPA----DSAKPAIYYFPD 89 (126)
Q Consensus 15 ~l~LS~lD~~~~-~~~~v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~~~~----~~g~~~I~c~~~ 89 (126)
.++||++|+... ...|++.+|||+.+. .. .+ .+++++||+||+++|++||||||||+..+ ++|+++|+|++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~-~~-~~-~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~- 79 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSD-SS-QY-PTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFE- 79 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSC-GG-GH-HHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCC-
T ss_pred cccCChhhcCccccccceeEEEEEECCC-CC-CH-HHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecC-
Confidence 368999999741 346999999999543 11 12 45799999999999999999999999764 25899999977
Q ss_pred CCCceEEEEEEeCC-----Cccccc
Q 038434 90 QNDGVSFTVAESDA-----DFSHLS 109 (126)
Q Consensus 90 ~~~Gv~fveA~~~~-----~l~~l~ 109 (126)
+|+.|++|+++. +++++.
T Consensus 80 --~~~~~~va~~~~d~~~p~~~~l~ 102 (451)
T 2rkv_A 80 --DVPRVVVKDLRDDPSAPTIEGMR 102 (451)
T ss_dssp --SSCEEEEEECTTCTTSCBHHHHH
T ss_pred --CCCeEEEEeCCCCCCCCCHHHHH
Confidence 788899999875 466653
No 6
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=28.17 E-value=28 Score=24.23 Aligned_cols=18 Identities=11% Similarity=0.224 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhhhhhcc
Q 038434 51 ILPKLADSLSLTLLHYLP 68 (126)
Q Consensus 51 ~~~~Lk~SLa~~L~~fyP 68 (126)
....++.++|++|+.||+
T Consensus 77 QA~AiR~aIArAL~~~~~ 94 (143)
T 3u5c_Q 77 QVYAIRQAIAKGLVAYHQ 94 (143)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhh
Confidence 578999999999999975
No 7
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=21.27 E-value=82 Score=23.79 Aligned_cols=33 Identities=15% Similarity=0.467 Sum_probs=25.1
Q ss_pred ccEEEEEeCCCCCcCccccchHHHHHHHHHHhhhhhcccCeEEec
Q 038434 31 SERVFFYQITDLTFDLFNSVILPKLADSLSLTLLHYLPLAGHIMW 75 (126)
Q Consensus 31 v~~v~fy~~~~~~~~~~~~~~~~~Lk~SLa~~L~~fyPlAGRl~~ 75 (126)
-..|+||-++. +. |..|+.+|..++++.|++.+
T Consensus 104 ~n~~~l~Gppg-tG-----------Kt~~a~ala~~~~l~G~vn~ 136 (267)
T 1u0j_A 104 RNTIWLFGPAT-TG-----------KTNIAEAIAHTVPFYGCVNW 136 (267)
T ss_dssp CCEEEEECSTT-SS-----------HHHHHHHHHHHSSCEEECCT
T ss_pred CcEEEEECCCC-CC-----------HHHHHHHHHhhhcccceeec
Confidence 34699998765 32 66788899999888898754
No 8
>3j20_K 30S ribosomal protein S9P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.08 E-value=52 Score=22.63 Aligned_cols=18 Identities=6% Similarity=0.039 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHhhhhhcc
Q 038434 51 ILPKLADSLSLTLLHYLP 68 (126)
Q Consensus 51 ~~~~Lk~SLa~~L~~fyP 68 (126)
....++.++|++|+.|++
T Consensus 74 QA~AiR~aIarAL~~~~~ 91 (135)
T 3j20_K 74 QAEAARMAIARALVEWTG 91 (135)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHHHHhcc
Confidence 578899999999999974
No 9
>2vqe_I 30S ribosomal protein S9, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.14.1.1 PDB: 1gix_L* 1hnw_I* 1hnx_I* 1hnz_I* 1hr0_I 1i94_I* 1i95_I* 1i96_I* 1i97_I* 1ibk_I* 1ibl_I* 1ibm_I 1j5e_I 1jgo_L* 1jgp_L* 1jgq_L* 1ml5_L* 1n32_I* 1n33_I* 1n34_I ...
Probab=20.04 E-value=61 Score=22.07 Aligned_cols=19 Identities=16% Similarity=0.287 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhhhhccc
Q 038434 51 ILPKLADSLSLTLLHYLPL 69 (126)
Q Consensus 51 ~~~~Lk~SLa~~L~~fyPl 69 (126)
....++.++|++|+.|.|-
T Consensus 73 QA~AiR~gIarAL~~~~~~ 91 (128)
T 2vqe_I 73 QIDAIKLGIARALVQYNPD 91 (128)
T ss_dssp HHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHHCHH
Confidence 5789999999999999773
No 10
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=19.43 E-value=1.5e+02 Score=18.05 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhhhhhcccCeEEecCCCCCCcEEEecC
Q 038434 51 ILPKLADSLSLTLLHYLPLAGHIMWPADSAKPAIYYFP 88 (126)
Q Consensus 51 ~~~~Lk~SLa~~L~~fyPlAGRl~~~~~~g~~~I~c~~ 88 (126)
-++..+.+|-+.+..-.-|||.+...-+.+.++|.-.+
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 36778888888888888999999876555678887743
Done!