BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038436
ESQKQCGDSLSSRSNINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVH
LSDYLLEPQQETLMKMIERLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRV
MKISENMHDCRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRA
KFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQRKLTKLVRR
GPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEI
LKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEIMVHQDKSCP

High Scoring Gene Products

Symbol, full name Information P value
AT1G20180 protein from Arabidopsis thaliana 8.2e-67
AT3G49070 protein from Arabidopsis thaliana 3.1e-28
AT3G19330 protein from Arabidopsis thaliana 2.6e-22
AT3G19250 protein from Arabidopsis thaliana 1.1e-16
AT4G34320 protein from Arabidopsis thaliana 2.7e-06
AT5G66675 protein from Arabidopsis thaliana 0.00020

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038436
        (353 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2198591 - symbol:AT1G20180 "AT1G20180" species...   679  8.2e-67   1
TAIR|locus:2101363 - symbol:AT3G49070 species:3702 "Arabi...   315  3.1e-28   1
TAIR|locus:2090624 - symbol:AT3G19330 "AT3G19330" species...   259  2.6e-22   1
TAIR|locus:2094123 - symbol:AT3G19250 "AT3G19250" species...   224  1.1e-16   1
TAIR|locus:2116214 - symbol:AT4G34320 "AT4G34320" species...   136  2.7e-06   1
TAIR|locus:1005716837 - symbol:AT5G66675 "AT5G66675" spec...   120  0.00020   1


>TAIR|locus:2198591 [details] [associations]
            symbol:AT1G20180 "AT1G20180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            EMBL:AC022472 InterPro:IPR007749 Pfam:PF05055 EMBL:DQ446265
            EMBL:AY630760 EMBL:AY924677 IPI:IPI00543184 IPI:IPI00555546
            PIR:E86335 RefSeq:NP_001077567.1 RefSeq:NP_173445.2
            UniGene:At.50782 PRIDE:Q6DYE5 EnsemblPlants:AT1G20180.1
            GeneID:838607 KEGG:ath:AT1G20180 TAIR:At1g20180 eggNOG:NOG322865
            HOGENOM:HOG000240802 InParanoid:Q6DYE5 OMA:ARGAYIV PhylomeDB:Q6DYE5
            ProtClustDB:CLSN2681503 Genevestigator:Q6DYE5 Uniprot:Q6DYE5
        Length = 390

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 146/340 (42%), Positives = 222/340 (65%)

Query:    20 YTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVHLSDYLLEPQQETLMKMIER 79
             Y E  RTK+  ++   + S+L++  S    SS+S +SF+ H +DYLL+P QETL  +++ 
Sbjct:    49 YLET-RTKAEDQLGITSCSKLSS--SSPSPSSSSDLSFHSHFTDYLLDPPQETLDALMQD 105

Query:    80 LHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMKISENMHD---------- 129
                 +L++ +F+ S EA +VC+ LL+ + Q + N+ +I+RVMKI + + +          
Sbjct:   106 SSLDNLIVTFFDLSSEACDVCETLLQCLQQIKINHNKIKRVMKIGKRVCNGAKTLECSPE 165

Query:   130 --CRATFKHLAAFASSKNPLS-IISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLL 186
               C   F+ L+ FA+ KNPL  I++  QFR  H     L + LTSK ++IRR+ +F K  
Sbjct:   166 MLCALIFQELSRFAALKNPLCRIVNEAQFRIVHDANSDLLTKLTSKKRRIRRKIRFFKFC 225

Query:   187 KKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPC-LALFQRKLTK-LVRRGPKT 244
             KK+G YSLVI+ +A++I LL+  LHS++G+ AAP L+  C   L ++K  K  + +  K 
Sbjct:   226 KKLGGYSLVITHSAIVITLLIIALHSILGVFAAPALLGLCSFCLLRKKKAKGRMHKSNKD 285

Query:   245 SLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEV 304
             + L+K   Q+D+AAKG++IL+ND DT+SR+  RL DE+EHRK +A MC +S   E+LKE 
Sbjct:   286 TTLEKLGTQIDIAAKGMFILINDLDTLSRLAGRLCDEIEHRKTVAAMCAKSRKIEVLKEA 345

Query:   305 MKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEI 344
             ++EF+ HE  F +QL+ELE+H+ LCF TINRSRRLVL +I
Sbjct:   346 LREFNGHEEKFSDQLQELEEHLYLCFHTINRSRRLVLAQI 385

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 57/134 (42%), Positives = 90/134 (67%)

Query:     1 ESQKQCGDSLSSRSNINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTS------- 53
             +S K+C  SL+S+ ++NEEY EAFRT SY+E  +KA+ QL   TS + LSS+S       
Sbjct:    21 KSDKECCRSLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGI-TSCSKLSSSSPSPSSSS 79

Query:    54 SVSFYVHLSDYLLEPQQETLMKMIERLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRAN 113
              +SF+ H +DYLL+P QETL  +++     +L++ +F+ S EA +VC+ LL+ + Q + N
Sbjct:    80 DLSFHSHFTDYLLDPPQETLDALMQDSSLDNLIVTFFDLSSEACDVCETLLQCLQQIKIN 139

Query:   114 YRRIQRVMKISENM 127
             + +I+RVMKI + +
Sbjct:   140 HNKIKRVMKIGKRV 153


>TAIR|locus:2101363 [details] [associations]
            symbol:AT3G49070 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132967 InterPro:IPR007749
            Pfam:PF05055 IPI:IPI00547589 PIR:T46123 RefSeq:NP_190476.1
            UniGene:At.43292 EnsemblPlants:AT3G49070.1 GeneID:824069
            KEGG:ath:AT3G49070 TAIR:At3g49070 eggNOG:NOG316842
            HOGENOM:HOG000070797 InParanoid:Q9SMU4 OMA:AFRTESY PhylomeDB:Q9SMU4
            ProtClustDB:CLSN2684227 Genevestigator:Q9SMU4 Uniprot:Q9SMU4
        Length = 416

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 117/354 (33%), Positives = 171/354 (48%)

Query:    15 NINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTS----SVSFYVHLSDY------ 64
             ++ EEY  AFRT+SY   W++   QL+ + S    SS+S    S S    L  Y      
Sbjct:    70 DVREEYANAFRTESYNHFWTRVV-QLSRKKSAVSSSSSSPPIESSSTSARLMSYRLFAHN 128

Query:    65 LLEPQQETLMKMIE--RLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMK 122
             LL+P   T+ ++++  R+  H   +   +  +E  N   LL   + +   + R     +K
Sbjct:   129 LLDPDLNTITRILDVSRVGRHTRTL-LSDYFLETANAF-LLCTQLLKNIHHLRSKYESLK 186

Query:   123 I---SENMHDCRATFKHLAAFASSKNP-LSIISMVQFRDYHHGKMLLFSSLTSKGKKIRR 178
                 SEN H+  A        +   +P +S  S +Q      G + L   L S+  K R 
Sbjct:   187 PKFHSEN-HNSLALIDQFTEISKWFDPFISSGSRIQL--IRSGCLYLLKRLESRRDKTRA 243

Query:   179 RAKF-NKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQRKLTKL 237
             + K  N L    G   LV++ T  LI  +    H+    +AAP L+       Q K   L
Sbjct:   244 KLKLINGLTHSSGL--LVLALTTTLIVTIAS--HAFALFLAAPTLLAS-----QFKPAGL 294

Query:   238 VRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGN 297
               +      L K AA+LDVAAKG YIL  D DTISR+V R+ DEV H + +A      G+
Sbjct:   295 RNK------LTKTAARLDVAAKGTYILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGS 348

Query:   298 SEIL--KEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEIMVHQD 349
               +   +EV +E    E SF E+L ELE+HI LCF+TINR+R L+++EI+   D
Sbjct:   349 GRVRGSEEVARELKRCEESFSEELDELEEHIYLCFMTINRARNLLVKEILDSDD 402


>TAIR|locus:2090624 [details] [associations]
            symbol:AT3G19330 "AT3G19330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
            membrane" evidence=IDA] GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AB025624 InterPro:IPR007749
            Pfam:PF05055 HOGENOM:HOG000071037 ProtClustDB:CLSN2680847
            EMBL:BT032878 IPI:IPI00516825 IPI:IPI00537342 IPI:IPI00541115
            RefSeq:NP_188564.2 RefSeq:NP_974339.1 RefSeq:NP_974340.1
            UniGene:At.43813 UniGene:At.50201 EnsemblPlants:AT3G19330.1
            GeneID:821467 KEGG:ath:AT3G19330 TAIR:At3g19330 eggNOG:NOG242218
            InParanoid:Q9LT84 OMA:NLTREYT PhylomeDB:Q9LT84
            Genevestigator:Q9LT84 Uniprot:Q9LT84
        Length = 382

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 98/351 (27%), Positives = 160/351 (45%)

Query:     9 SLSSRS-NINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVHLSDYLLE 67
             S+SS + N++ E   AF+T SY ++ S+    +   T  +       +     L   +L+
Sbjct:    39 SISSPTFNLSRELAHAFQTPSYHDVRSRVHV-VVDLTQIHHRLIQPDIEL---LLSQVLQ 94

Query:    68 PQQETLMKMIERLH---FHHLLMDYFEASVEAYNVCQLLLRSVHQTRAN-YRRIQRVMKI 123
             P +E + + I  +      +L+  YF+ S +A  +C  L ++VH  R + Y  +  +  I
Sbjct:    95 PNKECVQEAIRHVKQTTLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLYTPLLDLFNI 154

Query:   124 --SENMH--D---CRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKI 176
                +++   D   C   F       + +NP S      FRD      L FS L  K    
Sbjct:   155 FPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRD----TQLCFSQL--KHNLD 208

Query:   177 RRRAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIV--AAPGLMVPCLALFQRKL 234
             RR  K    ++ +  +      +  L+A +V V  S V I   A P L+V    L    L
Sbjct:   209 RRLRKSRSRVRLI--HHATAGSSLCLVAAVVAVAASAVVIASHALPILLVVAGPLCSPYL 266

Query:   235 TKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFR 294
                 +R   T++      QL+ A+KG ++L  D DTI R+V RL+  +E+ K + R+   
Sbjct:   267 PHSFKRKELTNI-----CQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRLGLE 321

Query:   295 SGNS-EILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEI 344
              G     ++E++K           QLK+LEDHICL F  +N++R L+L EI
Sbjct:   322 RGRDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLTEI 372


>TAIR|locus:2094123 [details] [associations]
            symbol:AT3G19250 "AT3G19250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AP000419 InterPro:IPR007749 Pfam:PF05055 EMBL:DQ446674
            EMBL:DQ653093 IPI:IPI00535377 RefSeq:NP_188556.2 UniGene:At.50199
            EnsemblPlants:AT3G19250.1 GeneID:821459 KEGG:ath:AT3G19250
            TAIR:At3g19250 eggNOG:NOG291252 HOGENOM:HOG000071037
            InParanoid:Q9LJK4 OMA:FASPESH PhylomeDB:Q9LJK4
            ProtClustDB:CLSN2680847 Genevestigator:Q9LJK4 Uniprot:Q9LJK4
        Length = 360

 Score = 224 (83.9 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 95/352 (26%), Positives = 155/352 (44%)

Query:     9 SLSSRSNINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVHLSDYLLEP 68
             S++S  N++ E   AF+T SY ++    +S+L        +  T   +  + LS  L  P
Sbjct:    29 SVASTFNLSHELAHAFQTPSYHDI----RSRLLV------IDPTQE-NLELFLSQEL-RP 76

Query:    69 QQETLMKMIERLH-----FHHLLMDYFEASVEAYNVCQLLLRSVHQTRAN-YRRIQRVMK 122
               E++ + +   H       +L+  YF+ S +A   C  L ++VH  R + Y  +  +  
Sbjct:    77 NNESVQEALSLRHAKQTTLTNLVSTYFQHSEDATRFCLNLYQNVHSARCHLYTPLLDLFN 136

Query:   123 I-SENMHD------CRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSK-GK 174
             I   + H       C   F       + +NP +      F+D      L F  L  K   
Sbjct:   137 IFPRDSHSAIDESFCNLAFDVFLKLDTFENPFASPESHSFQD----TQLCFYQLADKLDT 192

Query:   175 KIRRRAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQRKL 234
             +IR+     +LL    A S +   TA+++   V    + +   A P ++V    L    L
Sbjct:   193 RIRKSKSRVRLLHHATAGSALCLVTAVVV---VAASAAFIAYHALPTILVVAGPLCTPYL 249

Query:   235 TKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFR 294
                 +   K  L   F  QL+VAAKG + L  D DTI R+V RL+  V++ K + R+   
Sbjct:   250 PHSFK---KKELSNIF--QLNVAAKGTFALNKDLDTIDRLVSRLHTGVKNDKLLIRLGLE 304

Query:   295 SGNSEI-LKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEIM 345
              G     + E +K+      +   QL+ L DHIC  F  +N+SR L+L+EI+
Sbjct:   305 RGRDVYTIPEFVKQLRKSHVNHTHQLEVLVDHICRWFTNVNKSRSLLLKEIL 356


>TAIR|locus:2116214 [details] [associations]
            symbol:AT4G34320 "AT4G34320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] GO:GO:0016021 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL035521 EMBL:AL161585 EMBL:BX828285
            IPI:IPI00521881 PIR:T04778 RefSeq:NP_195158.1 UniGene:At.50394
            PRIDE:Q9SYZ7 DNASU:829582 EnsemblPlants:AT4G34320.1 GeneID:829582
            KEGG:ath:AT4G34320 TAIR:At4g34320 eggNOG:NOG262976
            HOGENOM:HOG000029756 InParanoid:Q9SYZ7 OMA:IIKHPNN PhylomeDB:Q9SYZ7
            ProtClustDB:CLSN2685739 Genevestigator:Q9SYZ7 InterPro:IPR007749
            Pfam:PF05055 Uniprot:Q9SYZ7
        Length = 374

 Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 57/276 (20%), Positives = 116/276 (42%)

Query:    85 LLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMKISENM------HDCRATFKHLA 138
             L+ DYFE S++  + C  L + + + R ++  I   ++  E+       +  + T + L 
Sbjct:   102 LVEDYFENSLKTLDFCAALEKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEELK 161

Query:   139 AFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVGAYSLVISQ 198
              F  +++P +      F+  +  +ML+   L  +  K+ ++ K     +K+ +   V + 
Sbjct:   162 NFKDAESPFNEDFFKMFQSVYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATF 221

Query:   199 TALLIALLVFVLHSMVGIVAA--PGLMVPCLALFQRKLTKLVRRGPKTSLLQKFAAQLDV 256
               +LI  +V    +   + AA      VP L    + +  L +        QK    +  
Sbjct:   222 ATVLICSVVAAAMAAPPVAAALAAATAVP-LGSMGKWIDSLWKNYENALKGQKEV--ISS 278

Query:   257 AAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEI-LKEVMKEFHMHESSF 315
                G ++ V D D I  ++ RL  E+      A         +I + ++ K+  +    F
Sbjct:   279 MQAGTFVAVKDLDNIRVLIERLEIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEV----F 334

Query:   316 LEQLKELEDHICLCFLTINRSRRLVLQEIMVHQDKS 351
              + ++EL     LC   I R+R ++LQ I+ H + +
Sbjct:   335 KKNVEELGTQADLCSRDIRRARTVILQRIIKHPNNA 370


>TAIR|locus:1005716837 [details] [associations]
            symbol:AT5G66675 "AT5G66675" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB018119 HOGENOM:HOG000029756 InterPro:IPR007749 Pfam:PF05055
            EMBL:AK119145 EMBL:BT005355 IPI:IPI00521542 RefSeq:NP_850929.1
            UniGene:At.25386 EnsemblPlants:AT5G66675.1 GeneID:836800
            KEGG:ath:AT5G66675 TAIR:At5g66675 eggNOG:NOG281248
            InParanoid:Q8GW16 OMA:SVYEQQV PhylomeDB:Q8GW16
            ProtClustDB:CLSN2918447 Genevestigator:Q8GW16 Uniprot:Q8GW16
        Length = 412

 Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 63/285 (22%), Positives = 121/285 (42%)

Query:    85 LLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMK------------ISENMHDCRA 132
             L+  YF++S++  + C  +   V + R     +Q  +K            +    +    
Sbjct:   121 LVNAYFDSSIKTLDFCNAVDNCVKRARIGQMLLQFALKQFEMESSGSNKSVEPGTNKYAK 180

Query:   133 TFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVGAY 192
             T + L  F +S +P      +     +  +++L   L  + +K+ ++ K  K  KK+   
Sbjct:   181 TLEELNKFKASGDPFDGDFFMLLESVYEQQVMLLEILHKQKRKLDKKLKNIKYWKKI--- 237

Query:   193 SLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQRKLTKLVRRGPKTSLLQKFAA 252
             S V+  TA  +++L+F +  +   VAAP ++    A     +  + +      L +K+  
Sbjct:   238 SNVVFVTAF-VSVLIFSV--VAAAVAAPPVVTALAAALAVPIGSIGKWC--NHLWKKYET 292

Query:   253 ----QLDVAAK---GVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEVM 305
                 Q D+      G Y+ + D D I   V +L  E+E    + ++ F     E  +EV 
Sbjct:   293 AVKGQKDIVLSMRIGAYVTMKDMDNIRVHVDKLKIEMESM--MQKVDFALKEKE--EEVA 348

Query:   306 KEFHMHESS-----FLEQLKELEDHICLCFLTINRSRRLVLQEIM 345
                 MHE S     F E+++E+ D+   C   I  +R +VL+ I+
Sbjct:   349 VRLSMHEISKKFDVFTERIEEVGDNATKCSKNITLARTIVLRHIL 393


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.134   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      353       353   0.00079  117 3  11 22  0.44    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  217 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.43u 0.08s 31.51t   Elapsed:  00:00:03
  Total cpu time:  31.44u 0.08s 31.52t   Elapsed:  00:00:03
  Start:  Sat May 11 07:23:42 2013   End:  Sat May 11 07:23:45 2013

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