BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038436
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DYE5|U496K_ARATH UPF0496 protein At1g20180 OS=Arabidopsis thaliana GN=At1g20180 PE=2
SV=2
Length = 390
Score = 275 bits (702), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 240/365 (65%), Gaps = 21/365 (5%)
Query: 1 ESQKQCGDSLSSRSNINEEYTEAFRTKSYVEMWSKAQSQLA------ARTSFNGLSSTSS 54
+S K+C SL+S+ ++NEEY EAFRT SY+E +KA+ QL +S SS+S
Sbjct: 21 KSDKECCRSLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGITSCSKLSSSSPSPSSSSD 80
Query: 55 VSFYVHLSDYLLEPQQETLMKMIERLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANY 114
+SF+ H +DYLL+P QETL +++ +L++ +F+ S EA +VC+ LL+ + Q + N+
Sbjct: 81 LSFHSHFTDYLLDPPQETLDALMQDSSLDNLIVTFFDLSSEACDVCETLLQCLQQIKINH 140
Query: 115 RRIQRVMKISENMHD------------CRATFKHLAAFASSKNPLS-IISMVQFRDYHHG 161
+I+RVMKI + + + C F+ L+ FA+ KNPL I++ QFR H
Sbjct: 141 NKIKRVMKIGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHDA 200
Query: 162 KMLLFSSLTSKGKKIRRRAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPG 221
L + LTSK ++IRR+ +F K KK+G YSLVI+ +A++I LL+ LHS++G+ AAP
Sbjct: 201 NSDLLTKLTSKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAAPA 260
Query: 222 LMVPC-LALFQRKLTK-LVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLY 279
L+ C L ++K K + + K + L+K Q+D+AAKG++IL+ND DT+SR+ RL
Sbjct: 261 LLGLCSFCLLRKKKAKGRMHKSNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGRLC 320
Query: 280 DEVEHRKDIARMCFRSGNSEILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRL 339
DE+EHRK +A MC +S E+LKE ++EF+ HE F +QL+ELE+H+ LCF TINRSRRL
Sbjct: 321 DEIEHRKTVAAMCAKSRKIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRSRRL 380
Query: 340 VLQEI 344
VL +I
Sbjct: 381 VLAQI 385
>sp|Q9SMU4|U496N_ARATH UPF0496 protein At3g49070 OS=Arabidopsis thaliana GN=At3g49070 PE=2
SV=1
Length = 416
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 171/352 (48%), Gaps = 36/352 (10%)
Query: 15 NINEEYTEAFRTKSYVEMWSKA---------QSQLAARTSFNGLSSTSSVSFYVHLSDYL 65
++ EEY AFRT+SY W++ S ++ S+++ + Y + L
Sbjct: 70 DVREEYANAFRTESYNHFWTRVVQLSRKKSAVSSSSSSPPIESSSTSARLMSYRLFAHNL 129
Query: 66 LEPQQETLMKMIE----RLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVM 121
L+P T+ ++++ H LL DYF + A+ +C LL+++H R+ Y ++
Sbjct: 130 LDPDLNTITRILDVSRVGRHTRTLLSDYFLETANAFLLCTQLLKNIHHLRSKYESLKPKF 189
Query: 122 KISENMHDCRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAK 181
SEN H+ A + +P I S + + G + L L S+ K R AK
Sbjct: 190 H-SEN-HNSLALIDQFTEISKWFDPF-ISSGSRIQLIRSGCLYLLKRLESRRDKTR--AK 244
Query: 182 FNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCL--ALFQRKLTKLVR 239
KL+ + S ++ ++ H+ +AAP L+ A + KLTK
Sbjct: 245 L-KLINGLTHSSGLLVLALTTTLIVTIASHAFALFLAAPTLLASQFKPAGLRNKLTKT-- 301
Query: 240 RGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSE 299
AA+LDVAAKG YIL D DTISR+V R+ DEV H + +A G+
Sbjct: 302 -----------AARLDVAAKGTYILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGR 350
Query: 300 IL--KEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEIMVHQD 349
+ +EV +E E SF E+L ELE+HI LCF+TINR+R L+++EI+ D
Sbjct: 351 VRGSEEVARELKRCEESFSEELDELEEHIYLCFMTINRARNLLVKEILDSDD 402
>sp|A2XCJ1|U496C_ORYSI UPF0496 protein 3 OS=Oryza sativa subsp. indica GN=OsI_009784 PE=3
SV=2
Length = 378
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 41/358 (11%)
Query: 11 SSRSNINEEYTEAFRTKSYVEMWSKA-------QSQLAAR-TSFNGLSSTSSVSFYVHLS 62
SS + EEYT AFRT+SY + W++ + L R G +++ + Y +
Sbjct: 29 SSSFDFREEYTSAFRTESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRLPSYRLFA 88
Query: 63 DYLLEPQQETLMKMIE-------RLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYR 115
++LLEP Q + + R LL Y+ + A +C LL+ + R YR
Sbjct: 89 EHLLEPDQRAVAAALASPRGSRLRPDVRGLLAAYYAETANASFLCSHLLKDIEHIRLRYR 148
Query: 116 RIQRVM-KISENMHDCRATFKHLAAFASS-KNPLSIISMVQ--FRDYHHGKMLLFSSLTS 171
++ + K++ ++ LA +++ P + ++ Q R+ G L L +
Sbjct: 149 PLKHTLRKLASDV-----GVSGLADVSAALGQPFTALAASQGRLREVQAGSGDLLRGLDA 203
Query: 172 KGKKIRRRAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQ 231
KK R R + L++ + S V + + + +H + A P +M P L +
Sbjct: 204 GRKKARHRIRSVARLRRALSVSFVTAVAVVAVVGACIGVHILAAFAAFP-MMSPAW-LGE 261
Query: 232 RKLTKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARM 291
R + R + +L+Q L+ AAKG YIL D +TISR+V R+ DE EH + R+
Sbjct: 262 RFFSG---RAARRALVQ-----LEAAAKGTYILNRDMETISRLVARVRDEGEHMVALLRL 313
Query: 292 CFR-------SGNSEILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQ 342
C G +++EV+++ +E SF +QL ELE+H+ LCF+TIN++R +V+
Sbjct: 314 CVEHRPAAGAGGKGRLVQEVLRQLSKNEESFRQQLDELEEHLFLCFMTINKARIMVMN 371
>sp|Q10RR9|U496C_ORYSJ UPF0496 protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0148000
PE=2 SV=1
Length = 378
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 41/358 (11%)
Query: 11 SSRSNINEEYTEAFRTKSYVEMWSKA-------QSQLAAR-TSFNGLSSTSSVSFYVHLS 62
SS + EEYT AFRT+SY + W++ + L R G +++ + Y +
Sbjct: 29 SSSFDFREEYTSAFRTESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRLPSYRLFA 88
Query: 63 DYLLEPQQETLMKMIE-------RLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYR 115
++LLEP Q + + R LL Y+ + A +C LL+ + R YR
Sbjct: 89 EHLLEPDQRAVAAALASPRGSRLRPDVRGLLAAYYAETANASFLCSHLLKDIEHIRLRYR 148
Query: 116 RIQRVM-KISENMHDCRATFKHLAAFASS-KNPLSIISMVQ--FRDYHHGKMLLFSSLTS 171
++ + K++ ++ LA +++ P + ++ Q R+ G L L +
Sbjct: 149 PLKHTLRKLASDV-----GVSGLADVSAALGQPFTALAASQGRLREVQAGSGDLLRGLDA 203
Query: 172 KGKKIRRRAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQ 231
KK R R + L++ + S V + + + +H + A P +M P L +
Sbjct: 204 GRKKARHRIRSVARLRRALSVSFVTAVAVVAVVGACIGVHILAAFAAFP-MMSPAW-LGE 261
Query: 232 RKLTKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARM 291
R + R + +L+Q L+ AAKG YIL D +TISR+V R+ DE EH + R+
Sbjct: 262 RFFSG---RAARRALVQ-----LEAAAKGTYILNRDMETISRLVARVRDEGEHMVALRRL 313
Query: 292 CFR-------SGNSEILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQ 342
C G +++EV+++ +E SF +QL ELE+H+ LCF+T N++R +V+
Sbjct: 314 CVEHRPAAGAGGKGRLVQEVLRQLSKNEESFRQQLDELEEHLFLCFMTTNKARIMVMN 371
>sp|Q5Z8N6|U496B_ORYSJ Putative UPF0496 protein 2 OS=Oryza sativa subsp. japonica
GN=Os06g0718300 PE=3 SV=1
Length = 408
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 249 KFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRS-GNSEILKEVMKE 307
+ A LD AA+G YI+ D DT+SRMVRR +DE+EH +D+AR+ R G +L+EV +E
Sbjct: 289 RAGATLDAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVARE 348
Query: 308 FHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEI 344
E QL ELE+H+CLC +TINR+RRLV E+
Sbjct: 349 EEECEEDLRAQLAELEEHVCLCLITINRTRRLVAHEM 385
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 37/129 (28%)
Query: 16 INEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSF------------------ 57
++EEY +AFR+KS++++WS A L S LS+++ +
Sbjct: 20 VDEEYNQAFRSKSFLDLWSHAHHHLTHTFSSFKLSTSTPCAGRGGAREDDFLHAGGDGGA 79
Query: 58 ---------YVHLSDYLLEPQQETLM----------KMIERLHFHHLLMDYFEASVEAYN 98
Y L D++LEP E+L + R LL++YF+ + EA
Sbjct: 80 ADDSEQSCSYTVLDDFVLEPSPESLARGARLQQRRRRRPRRHRVETLLIEYFDVTEEACE 139
Query: 99 VCQLLLRSV 107
C LL ++
Sbjct: 140 ACSALLAAI 148
>sp|A2YH25|U496B_ORYSI Putative UPF0496 protein 2 OS=Oryza sativa subsp. indica
GN=OsI_023618 PE=3 SV=2
Length = 408
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 249 KFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRS-GNSEILKEVMKE 307
+ A LD AA+G YI+ D DT+SRMVRR +DE+EH +D+AR+ R G +L+EV +E
Sbjct: 289 RAGATLDAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVARE 348
Query: 308 FHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEI 344
E QL ELE+H+CLC +TINR+RRLV E+
Sbjct: 349 EEECEEDLRAQLAELEEHVCLCLITINRTRRLVAHEM 385
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 37/129 (28%)
Query: 16 INEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSF------------------ 57
++EEY +AFR+KS++++WS A L S LS+++ +
Sbjct: 20 VDEEYNQAFRSKSFLDLWSHAHHHLTHTFSSFKLSTSTPCAGRGGAREDDFLHAGGDGGA 79
Query: 58 ---------YVHLSDYLLEPQQETLM----------KMIERLHFHHLLMDYFEASVEAYN 98
Y L D++LEP E+L + R LL++YF+ + EA
Sbjct: 80 ADDSEQSCSYTVLDDFVLEPSPESLARGARLQQRRRRRPRRHRVETLLIEYFDVTEEACE 139
Query: 99 VCQLLLRSV 107
C LL ++
Sbjct: 140 ACSALLAAI 148
>sp|Q9LT84|U496M_ARATH UPF0496 protein At3g19330 OS=Arabidopsis thaliana GN=At3g19330 PE=2
SV=2
Length = 382
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 36/353 (10%)
Query: 9 SLSSRS-NINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVHLSDYLLE 67
S+SS + N++ E AF+T SY ++ S+ + T + + L +L+
Sbjct: 39 SISSPTFNLSRELAHAFQTPSYHDVRSRVHV-VVDLTQIHHRLIQPDIEL---LLSQVLQ 94
Query: 68 PQQETL---MKMIERLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRA----------NY 114
P +E + ++ +++ +L+ YF+ S +A +C L ++VH R N
Sbjct: 95 PNKECVQEAIRHVKQTTLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLYTPLLDLFNI 154
Query: 115 RRIQRVMKISENMHDCRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSK-G 173
+ I E++ C F + +NP S FRD L FS L
Sbjct: 155 FPGDSLPAIDESL--CDLAFDVFLKLDTFENPFSSPESYSFRD----TQLCFSQLKHNLD 208
Query: 174 KKIRR-RAKFNKLLKKVGAYSLVISQTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQR 232
+++R+ R++ + SL + + +A V+ S A P L+V L
Sbjct: 209 RRLRKSRSRVRLIHHATAGSSLCLVAAVVAVAASAVVIASH----ALPILLVVAGPLCSP 264
Query: 233 KLTKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMC 292
L +R T++ QL+ A+KG ++L D DTI R+V RL+ +E+ K + R+
Sbjct: 265 YLPHSFKRKELTNI-----CQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRLG 319
Query: 293 FRSG-NSEILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEI 344
G + ++E++K QLK+LEDHICL F +N++R L+L EI
Sbjct: 320 LERGRDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLTEI 372
>sp|Q9LJK4|U496L_ARATH UPF0496 protein At3g19250 OS=Arabidopsis thaliana GN=At3g19250 PE=2
SV=1
Length = 360
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 153/361 (42%), Gaps = 51/361 (14%)
Query: 9 SLSSRSNINEEYTEAFRTKSYVEMWSKAQSQLAARTSFNGLSSTSSVSFYVHLSDYLLEP 68
S++S N++ E AF+T SY ++ S+ + + S L P
Sbjct: 29 SVASTFNLSHELAHAFQTPSYHDIRSRLLVIDPTQENLELFLSQE------------LRP 76
Query: 69 QQETLMKMIERLH-----FHHLLMDYFEASVEAYNVCQLLLRSVHQTRAN-YRRIQRVMK 122
E++ + + H +L+ YF+ S +A C L ++VH R + Y + +
Sbjct: 77 NNESVQEALSLRHAKQTTLTNLVSTYFQHSEDATRFCLNLYQNVHSARCHLYTPLLDLFN 136
Query: 123 I-SENMHD------CRATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSK-GK 174
I + H C F + +NP + F+D L F L K
Sbjct: 137 IFPRDSHSAIDESFCNLAFDVFLKLDTFENPFASPESHSFQD----TQLCFYQLADKLDT 192
Query: 175 KIRRRAKFNKLLKKVGAYS---LVISQTALLIALLVFVLHSMVGIVAAPG-LMVPCL--A 228
+IR+ +LL A S LV + + + H++ I+ G L P L +
Sbjct: 193 RIRKSKSRVRLLHHATAGSALCLVTAVVVVAASAAFIAYHALPTILVVAGPLCTPYLPHS 252
Query: 229 LFQRKLTKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDI 288
+++L+ + QL+VAAKG + L D DTI R+V RL+ V++ K +
Sbjct: 253 FKKKELSNIF--------------QLNVAAKGTFALNKDLDTIDRLVSRLHTGVKNDKLL 298
Query: 289 ARMCFRSG-NSEILKEVMKEFHMHESSFLEQLKELEDHICLCFLTINRSRRLVLQEIMVH 347
R+ G + + E +K+ + QL+ L DHIC F +N+SR L+L+EI+
Sbjct: 299 IRLGLERGRDVYTIPEFVKQLRKSHVNHTHQLEVLVDHICRWFTNVNKSRSLLLKEILRP 358
Query: 348 Q 348
Q
Sbjct: 359 Q 359
>sp|Q8GW16|U496H_ARATH UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2
SV=1
Length = 412
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 137/349 (39%), Gaps = 54/349 (15%)
Query: 37 QSQLAARTS--FNGLSS---TSSVSF--YVHLSDYLLEPQQETLMKMIE-------RLHF 82
S L RT+ N L+S T S+SF + +S LLE QE + +IE
Sbjct: 59 DSSLHQRTNRVINSLASGAQTRSLSFDALIEVSGCLLEMNQEVVRFIIESKEDVWDNKDL 118
Query: 83 HHLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMK------------ISENMHDC 130
L+ YF++S++ + C + V + R +Q +K + +
Sbjct: 119 TCLVNAYFDSSIKTLDFCNAVDNCVKRARIGQMLLQFALKQFEMESSGSNKSVEPGTNKY 178
Query: 131 RATFKHLAAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVG 190
T + L F +S +P + + +++L L + +K+ ++ K K KK+
Sbjct: 179 AKTLEELNKFKASGDPFDGDFFMLLESVYEQQVMLLEILHKQKRKLDKKLKNIKYWKKIS 238
Query: 191 AYSLVISQTALLI---------ALLVFVLHSMVGIVAAPGLMVPCLALFQRKLTKLVRRG 241
V + ++LI A V + V + C L+++ T + +G
Sbjct: 239 NVVFVTAFVSVLIFSVVAAAVAAPPVVTALAAALAVPIGSIGKWCNHLWKKYETAV--KG 296
Query: 242 PKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEIL 301
K +L G Y+ + D D I V +L E+E + E
Sbjct: 297 QKDIVLS--------MRIGAYVTMKDMDNIRVHVDKLKIEMESMMQKVDFALK----EKE 344
Query: 302 KEVMKEFHMHESS-----FLEQLKELEDHICLCFLTINRSRRLVLQEIM 345
+EV MHE S F E+++E+ D+ C I +R +VL+ I+
Sbjct: 345 EEVAVRLSMHEISKKFDVFTERIEEVGDNATKCSKNITLARTIVLRHIL 393
>sp|Q9SYZ7|U496A_ARATH UPF0496 protein At4g34320 OS=Arabidopsis thaliana GN=At4g34320 PE=1
SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 114/276 (41%), Gaps = 14/276 (5%)
Query: 84 HLLMDYFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMK------ISENMHDCRATFKHL 137
L+ DYFE S++ + C L + + + R ++ I ++ + + + + T + L
Sbjct: 101 ELVEDYFENSLKTLDFCAALEKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEEL 160
Query: 138 AAFASSKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVGAYSLVIS 197
F +++P + F+ + +ML+ L + K+ ++ K +K+ + V +
Sbjct: 161 KNFKDAESPFNEDFFKMFQSVYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVAT 220
Query: 198 -QTALLIALLVFVLHSMVGIVAAPGLMVPCLALFQRKLTKLVRRGPKTSLLQKFAAQLDV 256
T L+ +++ + + A L + + L + QK +
Sbjct: 221 FATVLICSVVAAAMAAPPVAAALAAATAVPLGSMGKWIDSLWKNYENALKGQKEV--ISS 278
Query: 257 AAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEI-LKEVMKEFHMHESSF 315
G ++ V D D I ++ RL E+ A +I + ++ K+ + F
Sbjct: 279 MQAGTFVAVKDLDNIRVLIERLEIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEV----F 334
Query: 316 LEQLKELEDHICLCFLTINRSRRLVLQEIMVHQDKS 351
+ ++EL LC I R+R ++LQ I+ H + +
Sbjct: 335 KKNVEELGTQADLCSRDIRRARTVILQRIIKHPNNA 370
>sp|Q9SYZ8|U496B_ARATH UPF0496 protein At4g34330 OS=Arabidopsis thaliana GN=At4g34330 PE=3
SV=1
Length = 354
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 103/265 (38%), Gaps = 28/265 (10%)
Query: 89 YFEASVEAYNVCQLLLRSVHQTRANYRRIQRVMKISENMHDCRATFKHLAAFASSKNPLS 148
YFE S++ + L R + + N+ I + N + + T + L F + P
Sbjct: 104 YFETSLKTLDFFNALKRGLQGVQINHLFI-----LDGNGY--KKTLQELKRFKDADRPFD 156
Query: 149 IISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVGAYSLVISQTALLIALLVF 208
F+ ++ + + L RR+ K +K LK++ + + S +I + F
Sbjct: 157 QDFFKMFQSVYNQQKWMLDKLQ------RRQNKLDKKLKRIRTWRKLSS----IIFMATF 206
Query: 209 VLHSMVGIVAAPGLMVPCLALFQRKLTKLVRRGPKTSLLQK-----FAAQLDVAAK---G 260
+ ++AA A + G L K Q +V + G
Sbjct: 207 ATLVICSVLAATMAAPHVAAALAAATPPVGSMGKWIDSLWKNYENEIKGQTEVFSSMYVG 266
Query: 261 VYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEVMKEFHMHESSFLEQLK 320
Y+ V D + I +++RL E+ + + + +G +K + F + ++
Sbjct: 267 TYVAVQDLNNIKDLIKRLDTEI---RGMVKNAEYAGELGPVKIGINAIKTQLEVFKKNVE 323
Query: 321 ELEDHICLCFLTINRSRRLVLQEIM 345
ELE +C I R+R ++LQ I+
Sbjct: 324 ELEIQADMCSTDIRRARTVILQRII 348
>sp|Q9H583|HEAT1_HUMAN HEAT repeat-containing protein 1 OS=Homo sapiens GN=HEATR1 PE=1
SV=3
Length = 2144
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 57 FYVHLSDY-LLEPQQETLMKMIERLHFHHLLMDYFEASVEAYNVCQLLLRSVHQTRANYR 115
F +HLS Y LL+P Q+ L +I R H H D A V Y H+TR R
Sbjct: 97 FLIHLSPYFLLKPAQKCLEWLIHRFHIHLYNQDSLIACVLPY----------HETRIFVR 146
Query: 116 RIQRVMKISENMHDCRATFKHLAAFASSKNPLSIISMVQ--FRDYHHGKMLLFSSLTSKG 173
IQ ++KI+ + H + L S PL+ +++ ++D G M SL +K
Sbjct: 147 VIQ-LLKINNSKH----RWFWLLPVKQSGVPLAKGTLITHCYKDL--GFMDFICSLVTKS 199
Query: 174 KKI 176
K+
Sbjct: 200 VKV 202
>sp|Q10QE9|U496A_ORYSJ UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100
PE=2 SV=1
Length = 388
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 260 GVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEVMKEFHMHESSFLEQL 319
G +I + D D+I ++ R+ E+ D F + E +K ++E F++ +
Sbjct: 301 GTFIAIKDLDSIRVLINRVELEISSMIDCVE--FAERDEEAVKFGVEEIKKKLEVFMKSV 358
Query: 320 KELEDHICLCFLTINRSRRLVLQEIMVH 347
++L + C I R+R +VLQ I+ H
Sbjct: 359 EDLGEQADRCSRDIRRARTVVLQRIIRH 386
>sp|A2XDK8|U496A_ORYSI UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2
SV=1
Length = 388
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 260 GVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEVMKEFHMHESSFLEQL 319
G +I + D D+I ++ R+ E+ D F + E +K ++E F++ +
Sbjct: 301 GTFIAIKDLDSIRVLINRVELEISSMIDCVE--FAERDEEAVKFGVEEIKKKLEVFMKSV 358
Query: 320 KELEDHICLCFLTINRSRRLVLQEIMVH 347
++L + C I R+R +VLQ I+ H
Sbjct: 359 EDLGEQADRCSRDIRRARTVVLQRIIRH 386
>sp|Q56XQ0|U496I_ARATH UPF0496 protein At2g18630 OS=Arabidopsis thaliana GN=At2g18630 PE=2
SV=3
Length = 393
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 89 YFEASVEAYNVCQLLLRSVHQTRANYRRIQ-RVMKISENMHD-----CRATFKHLAAFAS 142
YFE++ + + C L +++ R + IQ V + E D T + L F
Sbjct: 117 YFESTAKTMDFCSELENCLNRARRSQVIIQFAVNQFEEENEDKENRKYEKTLEELKRFKV 176
Query: 143 SKNPLSIISMVQFRDYHHGKMLLFSSLTSKGKKIRRRAKFNKLLKKVGAYSLVISQTALL 202
+ P + F + ++++ L +K+ +R + K ++V V + ++L
Sbjct: 177 AGEPFTKEFFALFDLVYKQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVL 236
Query: 203 I-------ALLVFVLHSMVGIVAAP-GLMVPCLALFQRKLTKLVRRGPKTSLLQKFAAQL 254
I V+ ++ G +A P G + K K+VR G K + +
Sbjct: 237 IFSVVAAAVAAPPVVAAIAGALAVPVGSVGKWCNTLWTKYEKVVR-GQK-----EIITSI 290
Query: 255 DVAAKGVYILVNDFDTISRMVRRLYDEVEHRKDIARMCFRSGNSEILKEVMKEFHMHESS 314
+ G YI V + D IS +VR++ EVE + + F + ++ + E
Sbjct: 291 RI---GTYISVKEMDNISILVRKV--EVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDV 345
Query: 315 FLEQLKELEDHICLCFLTINRSRRLVLQEIM 345
F E ++EL +H + ++R ++LQ I+
Sbjct: 346 FTETIEELGEHAGKYCSDVTKARTVILQRII 376
>sp|Q02261|VE1_HPV13 Replication protein E1 OS=Human papillomavirus type 13 GN=E1 PE=3
SV=1
Length = 646
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 227 LALFQRKLTKLVRRGPKTSLLQKFAAQLDVAAKGVYILVNDFDTISRMVRRLYDEVEHRK 286
LA Q KLT++V+ + + A +G DFD+ +R + ++ K
Sbjct: 348 LADNQFKLTEMVQWAYDNDFCDESEIAFEYAQRG------DFDSNARAFLNSNCQAKYVK 401
Query: 287 DIARMCFRSGNSEILKEVMKEFHMHESSFLEQ 318
D A MC N+E+ K MK++ + S +E+
Sbjct: 402 DCATMCKHYKNAEMKKMSMKQWITYRSKKIEE 433
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,755,807
Number of Sequences: 539616
Number of extensions: 3811863
Number of successful extensions: 16898
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 16862
Number of HSP's gapped (non-prelim): 29
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)