BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038439
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1
PE=1 SV=2
Length = 675
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 166/189 (87%), Gaps = 14/189 (7%)
Query: 5 KVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA-----------KYQSTAPCVH--- 50
KVKVWCTRQEASV+NIDMKANICCVKYNPGSSNYIA ++ + +H
Sbjct: 487 KVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFS 546
Query: 51 GHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIA 110
GHKKAVSYVKFLSN+ELASASTDSTLRLWDVK+NLPVRTFRGH NEKNFVGLTVNSEY+A
Sbjct: 547 GHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLA 606
Query: 111 CGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG 170
CGSE+NEVYVYHKEI++PVT HRF SPDMDD +E+AGSYFISAVCWKSDSPTMLTANSQG
Sbjct: 607 CGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQG 666
Query: 171 TIKVLVLAA 179
TIKVLVLAA
Sbjct: 667 TIKVLVLAA 675
>sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1
Length = 672
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 162/189 (85%), Gaps = 14/189 (7%)
Query: 5 KVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA-----------KYQSTAPCVH--- 50
KVKVWCT QEASVLNIDMKANICCVKYNPGS NYIA ++ + VH
Sbjct: 484 KVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFT 543
Query: 51 GHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIA 110
GHKKAVSYVKFLSNDELASASTDSTLRLWDVK+NLPVRTFRGH NEKNFVGLTV SEYIA
Sbjct: 544 GHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTVRSEYIA 603
Query: 111 CGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG 170
CGSE+NEV+VYHKEISKP+TWHRF + DM+D +++AGSYFISAVCWKSD PT+LTANSQG
Sbjct: 604 CGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWKSDRPTILTANSQG 663
Query: 171 TIKVLVLAA 179
TIKVLVLAA
Sbjct: 664 TIKVLVLAA 672
>sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1
SV=1
Length = 731
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 23/196 (11%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVH------------- 50
KVK+W T + SV +I+ KAN+CCVK++P SS Y + CVH
Sbjct: 536 AKVKLWSTNLDNSVASIEAKANVCCVKFSP-SSRYHLAFGCADHCVHYYDLRNTKQPIMV 594
Query: 51 --GHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH+KAVSY KF+S +E+ SASTDS L+LW+V + +R+F+GH+NEKNFVGL N +Y
Sbjct: 595 FKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDY 654
Query: 109 IACGSESNEVYVYHKEISKPVTWHRFSSPD--MD-DTDEDAGSYFISAVCWKS----DSP 161
IACGSE+N +Y+Y+K +SK + +F + +D D ED + F+SAVCW++ +S
Sbjct: 655 IACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESN 714
Query: 162 TMLTANSQGTIKVLVL 177
++ ANSQGTIKVL L
Sbjct: 715 VLIAANSQGTIKVLEL 730
>sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1
SV=2
Length = 733
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 23/196 (11%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVH------------- 50
KVK+W T + SV +I+ KAN+CCVK++P SS Y + CVH
Sbjct: 538 AKVKLWSTNLDNSVASIEAKANVCCVKFSP-SSRYHLAFGCADHCVHYYDLRNTKQPIMV 596
Query: 51 --GHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH+KAVSY KF+S +E+ SASTDS L+LW+V + +R+F+GH+NEKNFVGL N +Y
Sbjct: 597 FKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDY 656
Query: 109 IACGSESNEVYVYHKEISKPVTWHRFSSPD--MD-DTDEDAGSYFISAVCWKS----DSP 161
IACGSE+N +Y+Y+K +SK + +F + +D D ED + F+SAVCW++ +S
Sbjct: 657 IACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESN 716
Query: 162 TMLTANSQGTIKVLVL 177
++ ANSQGTIKVL L
Sbjct: 717 VLIAANSQGTIKVLEL 732
>sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2
Length = 1036
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 24/196 (12%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA-------------KYQSTAPCV-HG 51
VK+W + + I AN+CCV+++P SS+ +A + T C+ G
Sbjct: 840 VKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSG 899
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKE--------NLPVRTFRGHMNEKNFVGLT 103
H KAVSY KFL N+ L +ASTD+TL+LWD+K+ N TF GH NEKNFVGL+
Sbjct: 900 HNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLS 959
Query: 104 VNSEYIACGSESNEVYVYHKEISKPVTWHRFSS--PDMDDTDEDAGSYFISAVCWKSDSP 161
+ YIACGSE+NEVY YH+ + P+T ++F S P E+ + F+S+VCW+ S
Sbjct: 960 TSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSN 1019
Query: 162 TMLTANSQGTIKVLVL 177
+++A+S G+IKVL L
Sbjct: 1020 MVVSASSNGSIKVLQL 1035
>sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1
Length = 845
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 112/193 (58%), Gaps = 21/193 (10%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA---------KYQSTAPCVH---- 50
G VK+W Q S+ I KAN+CCV++ S +A Y P +
Sbjct: 649 GTVKLWSINQGVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTM 708
Query: 51 -GHKKAVSYVKFLSNDELASASTDSTLRLWDVKENL------PVRTFRGHMNEKNFVGLT 103
GH K VSYVKF+ + L S+STD+TL+LWD+ + P+ +F GH N KNFVGL+
Sbjct: 709 IGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLS 768
Query: 104 VNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD-MDDTDEDAGSYFISAVCWKSDSPT 162
V+ YIA GSE+NEV+VYHK PV + F++ D M + D S FIS++CW+ S T
Sbjct: 769 VSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSST 828
Query: 163 MLTANSQGTIKVL 175
++ ANS G IK+L
Sbjct: 829 LVAANSNGNIKIL 841
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 52 HKKAVSYVKFLSNDE--LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
HKK V + S D LAS S D T++LW + + + + T + N + + +
Sbjct: 625 HKKRVWSIDISSADPTLLASGSDDGTVKLWSINQGVSIGTIKTKANVCCVQFPSDSGRSL 684
Query: 110 ACGSESNEVYVY 121
A GS ++VY Y
Sbjct: 685 AFGSADHKVYYY 696
>sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1
Length = 794
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 118/195 (60%), Gaps = 21/195 (10%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNP--------GSSNY-IAKYQSTAP-----CV 49
G VK+W Q S+ I KANICCV++ GS+++ + Y P +
Sbjct: 599 GSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTM 658
Query: 50 HGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENL------PVRTFRGHMNEKNFVGLT 103
GH K VSYV+F+ + L S+STD+TL+LWD+ ++ P+ +F GH N KNFVGL+
Sbjct: 659 IGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS 718
Query: 104 VNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD-MDDTDEDAGSYFISAVCWKSDSPT 162
V+ YIA GSE+NEV+VYHK PV ++F + D + + + D S FIS+VCW+ S T
Sbjct: 719 VSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSST 778
Query: 163 MLTANSQGTIKVLVL 177
++ ANS G IK+L +
Sbjct: 779 LVAANSTGNIKILEM 793
>sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1
SV=1
Length = 1029
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 119/196 (60%), Gaps = 24/196 (12%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA-------------KYQSTAPC-VHG 51
VK+W ++ S+ I AN+CCV+++ S++ +A +Y T C + G
Sbjct: 833 VKLWSINEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAG 892
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPV--------RTFRGHMNEKNFVGLT 103
H+KAVSYVKF+ ++ + SASTD++L+LW++ + T++GH N+KNFVGL+
Sbjct: 893 HEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLS 952
Query: 104 VNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE--DAGSYFISAVCWKSDSP 161
V YIACGSE+NEVY Y+K + P+T ++F S D +E D F+S+VCW+ S
Sbjct: 953 VLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSN 1012
Query: 162 TMLTANSQGTIKVLVL 177
++ ANS G +K+L L
Sbjct: 1013 MLVAANSTGNMKLLKL 1028
>sp|Q9FFA7|RUP2_ARATH WD repeat-containing protein RUP2 OS=Arabidopsis thaliana GN=RUP2
PE=1 SV=1
Length = 368
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 22/173 (12%)
Query: 23 KANICCVKYNPGSSNYIA--------------KYQSTAPCVHGHKKAVSYVKFLSNDELA 68
++ +CCV+++P +A K A + GH K VSYV+FL +
Sbjct: 194 RSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVV 253
Query: 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTV--NSEYIACGSESNEVYVYHKEIS 126
+A TD L+LW V++ +RT+ GH+N +NFVGL+V N CGSE+N V+VY +
Sbjct: 254 TAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWG 313
Query: 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS---DSPTMLTANSQGTIKVLV 176
KPV F M+ + F+S+VCW+ D T++ S G ++V V
Sbjct: 314 KPVWVDGFEPVGMNSGSD---KRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYV 363
>sp|Q9LTJ6|RUP1_ARATH WD repeat-containing protein RUP1 OS=Arabidopsis thaliana GN=RUP1
PE=1 SV=1
Length = 385
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 41/202 (20%)
Query: 4 GKVKVWCTRQEASV---LNIDMKANICCVKYNPGSSNYIA--------------KYQSTA 46
G V++W R ++ + A IC V+++P + IA +
Sbjct: 190 GTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPL 249
Query: 47 PCVHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLP-VRTFRGHMNEKNFVGLTV- 104
+ GH K V+Y +F+ + + + STD +L+ WD+ VRT+RGH+N +NFVGL+V
Sbjct: 250 IVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVW 309
Query: 105 -NSEYIACGSESNEVYVYHKEISKPVTW-------HRFSSPDMDDTDEDAGSYFISAVCW 156
+ + GSE+N+V+VY K +PV W +RF S F+S+VC
Sbjct: 310 RHGGLVVSGSENNQVFVYDKRWEEPV-WVCGLGHTNRFGSD----------RRFVSSVCL 358
Query: 157 KS---DSPTMLTANSQGTIKVL 175
+ D T++ S G +++
Sbjct: 359 RQVDEDWCTLVAGGSDGALEIF 380
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126
A+AS D T RLWDV+ P+R F GH N+ + V N+ Y+A GS + ++
Sbjct: 460 FATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTG 519
Query: 127 KPV-TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
V ++ SP +SA+C +D ++ +A+ G IKV
Sbjct: 520 GTVRVFNAHHSP-------------VSALCMSADGLSLASADESGIIKV 555
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH+ V V F N LA+ S+D T R+WDV+ VR F H + + + ++ + +
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSL 544
Query: 110 ACGSESNEVYVY 121
A ES + V+
Sbjct: 545 ASADESGIIKVW 556
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTVNS-EYIAC 111
VS+VKF N + + +A+ DSTL+LWD ++T+ GH NEK F +V +++
Sbjct: 211 VSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVS 270
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGH 294
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 49 VHGHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
++GH +S V + S+ L SAS D TL+LWDV+ ++T +GH + S
Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 108 YIACGSESNEVYVYHKEISK 127
I GS V ++ + K
Sbjct: 137 LIVSGSFDESVKIWEVKTGK 156
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH A+S VKF N E LAS++ D+ + +W + +T GH E + V + +S +
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 110 ACGSESNEVYVY 121
S+ + ++
Sbjct: 97 VSASDDKTLKLW 108
>sp|Q9QXE7|TBL1X_MOUSE F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus
GN=Tbl1x PE=2 SV=2
Length = 527
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSND 65
+K+W +Q+A V D++A+ Y K+ T P SN
Sbjct: 386 LKIWSMKQDACVH--DLQAH--------SKEIYTIKWSPTGPATSNPN---------SNI 426
Query: 66 ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125
LASAS DST+RLWDV+ + + T H V + + +Y+A GS V++++ +
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
Query: 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177
V +R G+ I VCW + + + S G++ VL L
Sbjct: 487 GSLVHSYR-------------GTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + +N AS STD + + + + PV+TF+GH NE N +
Sbjct: 320 HSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 368
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--VHGHKKAVSYVKF 61
G+ K A L++D + N + ++ + P GH V+ +K+
Sbjct: 311 GEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW 370
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
S LAS S D TL++W +K++ V + H E
Sbjct: 371 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 406
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 4 GKVKVWCTRQEASVLNIDM--KANICCVKYNPGSSNYIAKYQST---------APCV--- 49
G ++VW + A +L M KANIC + ++P + Q T CV
Sbjct: 85 GSIRVW-DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY 143
Query: 50 HGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH +AV ++F + + LASA+ D T++LWD+ + F GH N V N
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 109 IACGSESNEVYVYHKE 124
+A GS + + E
Sbjct: 204 LASGSSDRTIRFWDLE 219
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDELASASTDS-TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V V+ + +EL A + S ++R+WD++ +RT GH + E++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 110 ACGSESNEVYVY 121
A GS+ + ++
Sbjct: 121 ASGSQDTNIKLW 132
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126
LA+ D + LW + + + + GH + V L E I GS+S + V+ E +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 127 K 127
K
Sbjct: 96 K 96
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 51 GHKKAVSYVKFLSND-ELASASTDSTLRLWDVKE 83
GH V+ V+F N+ LAS S+D T+R WD+++
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 4 GKVKVWCTRQEASVLNIDM--KANICCVKYNPGSSNYIAKYQST---------APCV--- 49
G ++VW + A +L M KANIC + ++P + Q T CV
Sbjct: 85 GSIRVW-DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY 143
Query: 50 HGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH +AV ++F + + LASA+ D T++LWD+ + F GH N V N
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 109 IACGSESNEVYVYHKE 124
+A GS + + E
Sbjct: 204 LASGSSDRTIRFWDLE 219
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDELASASTDS-TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V V+ + +EL A + S ++R+WD++ +RT GH + E++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 110 ACGSESNEVYVY 121
A GS+ + ++
Sbjct: 121 ASGSQDTNIKLW 132
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126
LA+ D + LW + + + + GH + V L E I GS+S + V+ E +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 127 K 127
K
Sbjct: 96 K 96
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 51 GHKKAVSYVKFLSND-ELASASTDSTLRLWDVKE 83
GH V+ V+F N+ LAS S+D T+R WD+++
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ GH NEK F +V ++I
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGH 300
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L SAS D TL++WDV ++T +GH N
Sbjct: 75 YDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 30 KYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVR 88
K P NY K+ + GH KAVS VKF N E LAS+S D +++W + +
Sbjct: 27 KPTPVKPNYALKFT-----LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
T GH + V + +S + S+ + ++
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 89
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
IS V W SDS +++A+ T+K+
Sbjct: 90 --------------ISDVAWSSDSNLLVSASDDKTLKI 113
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ GH NEK F +V ++I
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGH 300
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L SAS D TL++WDV ++T +GH N
Sbjct: 75 YDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 30 KYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVR 88
K P NY K+ + GH KAVS VKF N E LAS+S D +++W + +
Sbjct: 27 KPTPVKPNYALKFT-----LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
T GH + V + +S + S+ + ++
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 89
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
IS V W SDS +++A+ T+K+
Sbjct: 90 --------------ISDVAWSSDSNLLVSASDDKTLKI 113
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ GH NEK F +V ++I
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGH 300
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L SAS D TL++WDV ++T +GH N
Sbjct: 75 YDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 30 KYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVR 88
K P NY K+ + GH KAVS VKF N E LAS+S D +++W + +
Sbjct: 27 KPTPVKPNYALKFT-----LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
T GH + V + +S + S+ + ++
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 89
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
IS V W SDS +++A+ T+K+
Sbjct: 90 --------------ISDVAWSSDSNLLVSASDDKTLKI 113
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ GH NEK F +V ++I
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGH 300
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L SAS D TL++WDV ++T +GH N
Sbjct: 75 YDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 30 KYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVR 88
K P NY K+ + GH KAVS VKF N E LAS+S D +++W + +
Sbjct: 27 KPTPVKPNYALKFT-----LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
T GH + V + +S + S+ + ++
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 89
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
IS V W SDS +++A+ T+K+
Sbjct: 90 --------------ISDVAWSSDSNLLVSASDDKTLKI 113
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD ++T+ GH NEK F +V ++I
Sbjct: 213 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVS 272
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 273 GSEDNLVYIWNLQTKEIVQKLQGH 296
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y KY+ T ++GH +S V + S+ L SAS D TL+LWD++ ++T +GH N
Sbjct: 71 YDGKYERT---LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNY 127
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 128 VFCCNFNPPSNLIISGSFDETVKIWEVKTGK 158
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH +AVS VKF N E LAS+S D + +W + RT GH E + V + +S +
Sbjct: 39 GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRL 98
Query: 110 ACGSESNEVYVY 121
S+ + ++
Sbjct: 99 VSASDDKTLKLW 110
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD ++T+ GH NEK F +V ++I
Sbjct: 213 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVS 272
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 273 GSEDNLVYIWNLQTKEIVQKLQGH 296
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y KY+ T ++GH +S V + S+ L SAS D TL+LWDV+ ++T +GH N
Sbjct: 71 YDGKYEKT---LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNY 127
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 128 VFCCNFNPPSNLIISGSFDETVKIWEVKTGK 158
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH +AVS VKF N E LAS+S D + +W + +T GH E + V + +S +
Sbjct: 39 GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL 98
Query: 110 ACGSESNEVYVY 121
S+ + ++
Sbjct: 99 VSASDDKTLKLW 110
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ GH NEK F +V ++I
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KE+ + + H
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGH 327
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 37 NYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMN 95
NY K+ + GH KAVS VKF N E LAS+S D +++W + +T GH
Sbjct: 61 NYTLKFT-----LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 115
Query: 96 EKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
+ V + +S + GS+ + V+ K
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGK 147
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L S S D TL++W++ ++T +GH N
Sbjct: 102 YDGKFEKT---ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY 158
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ K
Sbjct: 159 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 189
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 19/102 (18%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 116
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178
IS V W SDS +++ + T+KV L+
Sbjct: 117 --------------ISDVAWSSDSRLLVSGSDDKTLKVWELS 144
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 42 YQSTAPCV---HGHKKAVSYVKFL-SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEK 97
+Q T CV HGH VS V F+ + D L SAS D T+++W+V V+TF GH
Sbjct: 177 FQQTFECVKTMHGHDHNVSSVSFVPAGDYLLSASRDKTIKMWEVATGYCVKTFTGHREWV 236
Query: 98 NFVGLTVNSEYIACGSESNEVYVYH 122
V + V+ +A S + V V+
Sbjct: 237 RMVRVNVDGSLMASCSNDHSVRVWQ 261
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
LAS S D T+R+WDV L + T GH N + +Y+ S+ + ++
Sbjct: 310 LASGSRDKTIRVWDVNSGLCLFTLVGHDNWVRGIVFHPGGKYMLSASDDKTLRIW 364
Score = 33.9 bits (76), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 51 GHKKAVSYVKFLS-NDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH+ V+ V F +ASAS D+T+++WD + RT +GH + + + + +
Sbjct: 104 GHRATVTRVVFHPVFSMMASASEDATIKIWDFETGEYERTLKGHTDSVQDLAFDSHGKLL 163
Query: 110 A-CGSE 114
A C S+
Sbjct: 164 ASCSSD 169
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V + F + + SAS D TLR+WD++ ++T H + + + + Y+
Sbjct: 335 GHDNWVRGIVFHPGGKYMLSASDDKTLRIWDLRNKRCMKTLYAHSHFCTSLDMHKSHPYV 394
Query: 110 ACGSESNEVYVY 121
GS V V+
Sbjct: 395 ISGSVDTTVKVW 406
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTVNS-EYIAC 111
VS+VKF N + + +A+ D+TL+LWD ++T+ GH NEK F +V +++
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KEI + + H
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGH 294
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 49 VHGHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
++GH +S V + S+ L SAS D TL++WD++ ++T +GH + S
Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 108 YIACGSESNEVYVYHKEISK 127
I GS V ++ + K
Sbjct: 137 LIVSGSFDESVKIWEVKTGK 156
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH A+S VKF N E LAS++ D+ + +W + +T GH E + V + +S +
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 110 ACGSESNEVYVY 121
S+ + V+
Sbjct: 97 VSASDDKTLKVW 108
>sp|Q9BQ87|TBL1Y_HUMAN F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens
GN=TBL1Y PE=2 SV=1
Length = 522
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSND 65
+K+W +Q+A V D++A+ + Y K+ T P ++
Sbjct: 383 LKIWSMKQDACVH--DLQAHSKEI--------YTIKWSPTGPATSNPNSSIM-------- 424
Query: 66 ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125
LASAS DST+RLWDV++ + T H V + + +Y+A GS V++++ +
Sbjct: 425 -LASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQS 483
Query: 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177
V H + G+ I VCW + + + S G++ VL L
Sbjct: 484 GSLV--HSYQ-----------GTGGIFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + +N AS STD + + + + PV+TF+GH NE N +
Sbjct: 317 HSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAI 365
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--VHGHKKAVSYVKF 61
G+ K A L++D + N+ + ++ + P GH V+ +K+
Sbjct: 308 GEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKW 367
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
S LAS S D TL++W +K++ V + H E
Sbjct: 368 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 403
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 49 VHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS 106
+ GH+ VS VKFL D+L ASAS D T+R+W+V +RT GH +++V +TV S
Sbjct: 192 LRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRTITGH---EDWVRMTVPS 247
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKE----NLPVRTFRGHMNEKNFVGLT 103
+ GH + V V F S LA+ S+D ++++WD ++ +T RGH + + V
Sbjct: 146 LKGHTREVWGVDFDSKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFL 205
Query: 104 VNSEYIACGSESNEVYVYH-------KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCW 156
+ IA S + ++ + I+ W R + P D T + S +A W
Sbjct: 206 PGDDLIASASRDKTIRIWEVATTFCIRTITGHEDWVRMTVPSTDGTLLGSCSSDNTARVW 265
Query: 157 KSDSPTM 163
S M
Sbjct: 266 DPTSGVM 272
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 42 YQSTAPC---VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEK 97
+ TAP + H+ ++ V F LASAS D+T+++WD + RT +GH E
Sbjct: 94 WLPTAPARYTLTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREV 153
Query: 98 NFVGLTVNSEYIACGSESNEVYVY 121
V ++A S + V+
Sbjct: 154 WGVDFDSKGSFLATCSSDLSIKVW 177
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
+A+ S D T+++WDV +RT GH + + + +++ S+ + V+
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTVSGHNDWIRGLVFHPSGKHLLSASDDKTIRVW 368
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 54 KAVSYVKFLSNDELASAST-DSTLRLWDVKENLP-VRTFRGHMNEKNFVGLTVN---SEY 108
K VS+VKF N + A T D+TLRLW N ++T+ GH NEK + T + ++
Sbjct: 216 KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKW 275
Query: 109 IACGSESNEVYVYH---KEISKPVTWHR 133
I GSE N +Y+Y+ +EI + + H
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHE 303
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 33 PGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFR 91
P + NYI KY + GH K++S VKF + + LASAS D T+++W + RT
Sbjct: 31 PQTPNYILKY-----TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE 85
Query: 92 GHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV 129
GH + + + +S+ I S+ + ++ E K V
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMV 123
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDELA-SASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK+ +S + + + +L SAS D T+++WDV+ V+T +GH
Sbjct: 76 YDGKFERT---LEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEY 132
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYH-------KEI---SKPVTWHRFSSPDMDDTDEDA 146
V S I GS V ++ K I S PVT F + D T +
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF---NRDGTLVVS 189
Query: 147 GSYFISAVCWKSDSPTML 164
GSY + W + + +L
Sbjct: 190 GSYDGTVRIWDTTTGQLL 207
>sp|Q7RY30|LIS11_NEUCR Nuclear distribution protein pac1-1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=pac1-1 PE=3 SV=2
Length = 453
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 51 GHKKAVSYVKFL--SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH +VS V+F+ S + L SAS D TLR+WDV V+T RGH V +++ +Y
Sbjct: 199 GHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSLDGKY 258
Query: 109 IACGSESNEVYVYHKEISKP 128
I S+ ++ I+ P
Sbjct: 259 ILSTSDDYTSRLWDVTITNP 278
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 49 VHGHKKAVSYVKF---LSNDELASASTDSTLRLWDVKENLP-VRTFRGH 93
+ GH KAV V + N LAS S+D T++LWD ++ +RT GH
Sbjct: 152 IKGHTKAVLDVDYGGPRGNTLLASCSSDLTIKLWDPLDSYKNIRTLPGH 200
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 49 VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMN---EKNFVGLTV 104
+ H+ ++ V F LAS S D T+++WD + RT +GH + ++ G
Sbjct: 110 LQSHRDPITCVAFHPVFSSLASGSEDQTIKIWDWELGELERTIKGHTKAVLDVDYGGPRG 169
Query: 105 NSEYIACGSE 114
N+ +C S+
Sbjct: 170 NTLLASCSSD 179
>sp|Q9BZK7|TBL1R_HUMAN F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens
GN=TBL1XR1 PE=1 SV=1
Length = 514
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 48 CVH---GHKKAVSYVKFL----------SNDELASASTDSTLRLWDVKENLPVRTFRGHM 94
CVH H K + +K+ +N LASAS DST+RLWDV + + T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 95 NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154
V + + Y+A GS V++++ + V +R G+ I V
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR-------------GTGGIFEV 489
Query: 155 CWKSDSPTMLTANSQGTIKVLVL 177
CW + + + S G++ VL L
Sbjct: 490 CWNAAGDKVGASASDGSVCVLDL 512
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + SN+ AS STD + + + ++ P++TF+GH NE N +
Sbjct: 307 HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--VHGHKKAVSYVKF 61
G+ K A L++D ++N + ++ K P GH V+ +K+
Sbjct: 298 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
+ + LAS S D TL++W +K++ V + H E
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKE 393
>sp|Q7SZM9|TB1RA_XENLA F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis
GN=tbl1xr1-a PE=1 SV=1
Length = 519
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 48 CVH---GHKKAVSYVKFL----------SNDELASASTDSTLRLWDVKENLPVRTFRGHM 94
CVH H K + +K+ +N LASAS DST+RLWDV + + T H
Sbjct: 388 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 447
Query: 95 NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154
V + + Y+A GS V++++ + V +R G+ I V
Sbjct: 448 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR-------------GTGGIFEV 494
Query: 155 CWKSDSPTMLTANSQGTIKVLVL 177
CW + + + S G++ VL L
Sbjct: 495 CWNAAGDKVGASASDGSVCVLDL 517
Score = 37.4 bits (85), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + SN+ AS STD + + + ++ P++TF+GH NE N +
Sbjct: 312 HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 360
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAP--CVHGHKKAVSYVKF 61
G+ K A L++D ++N + ++ K P GH V+ +K+
Sbjct: 303 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW 362
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
+ + LAS S D TL++W +K + V + H E
Sbjct: 363 DPTGNLLASCSDDMTLKIWSMKHDTCVHDLQAHNKE 398
>sp|O60907|TBL1X_HUMAN F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens
GN=TBL1X PE=1 SV=3
Length = 577
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 32/172 (18%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSND 65
+K+W +QE + D++A+ Y K+ T P SN
Sbjct: 436 LKIWSMKQEVCIH--DLQAH--------NKEIYTIKWSPTGPATSNPN---------SNI 476
Query: 66 ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125
LASAS DST+RLWD++ + T H V + + +Y+A GS V++++ +
Sbjct: 477 MLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 536
Query: 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177
V +R G+ I VCW + + + S G++ VL L
Sbjct: 537 GNLVHSYR-------------GTGGIFEVCWNARGDKVGASASDGSVCVLDL 575
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + +N AS STD + + + + PV+TF+GH NE N +
Sbjct: 370 HSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 418
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--VHGHKKAVSYVKF 61
G+ K A L++D + N + ++ + P GH V+ +K+
Sbjct: 361 GEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW 420
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
S LAS S D TL++W +K+ + + + H E
Sbjct: 421 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE 456
>sp|Q6GPC6|TB1RB_XENLA F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis
GN=tbl1xr1-b PE=2 SV=1
Length = 522
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 48 CVH---GHKKAVSYVKFL----------SNDELASASTDSTLRLWDVKENLPVRTFRGHM 94
CVH H K + +K+ +N LASAS DST+RLWDV + + T H
Sbjct: 391 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 450
Query: 95 NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154
V + + Y+A GS V++++ + V +R G+ I V
Sbjct: 451 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR-------------GTGGIFEV 497
Query: 155 CWKSDSPTMLTANSQGTIKVLVL 177
CW + + + S G++ VL L
Sbjct: 498 CWNAAGDKVGASASDGSVCVLDL 520
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + SN+ AS STD + + + ++ P++TF+GH NE N +
Sbjct: 315 HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 363
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAP--CVHGHKKAVSYVKF 61
G+ K A L++D ++N + ++ K P GH V+ +K+
Sbjct: 306 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW 365
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
+ + LAS S D TL++W +K + V + H E
Sbjct: 366 DPTGNLLASCSDDMTLKIWSMKHDTCVHDLQAHNKE 401
>sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus
GN=Tbl1xr1 PE=2 SV=1
Length = 514
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 48 CVH---GHKKAVSYVKFL----------SNDELASASTDSTLRLWDVKENLPVRTFRGHM 94
CVH H K + +K+ +N LASAS DST+RLWDV + + T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 95 NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154
V + + Y+A GS V++++ + V +R G+ I V
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR-------------GTGGIFEV 489
Query: 155 CWKSDSPTMLTANSQGTIKVLVL 177
CW + + + S G++ VL L
Sbjct: 490 CWNAAGDKVGASASDGSVCVLDL 512
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + SN+ AS STD + + + ++ P++TF+GH NE N +
Sbjct: 307 HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAP--CVHGHKKAVSYVKF 61
G+ K A L++D ++N + ++ K P GH V+ +K+
Sbjct: 298 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
+ + LAS S D TL++W +K++ V + H E
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKE 393
>sp|Q4R8H1|TBL1X_MACFA F-box-like/WD repeat-containing protein TBL1X OS=Macaca
fascicularis GN=TBL1X PE=2 SV=1
Length = 569
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 32/172 (18%)
Query: 6 VKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSND 65
+K+W +QE + D++A+ Y K+ T P SN
Sbjct: 428 LKIWSMKQEVCIH--DLQAH--------NKEIYTIKWSPTGPATSNPN---------SNI 468
Query: 66 ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125
LASAS DST+RLWD++ + T H V + + Y+A GS V++++ +
Sbjct: 469 MLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQS 528
Query: 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177
V +R G+ I VCW + + + S G++ VL L
Sbjct: 529 GNLVHSYR-------------GTGGIFEVCWNARGDKVGASASDGSVCVLDL 567
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 52 HKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
H V + +N AS STD + + + + PV+TF+GH NE N +
Sbjct: 362 HSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 410
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--VHGHKKAVSYVKF 61
G+ K A L++D + N+ + ++ + P GH V+ +K+
Sbjct: 353 GEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW 412
Query: 62 -LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNE 96
S LAS S D TL++W +K+ + + + H E
Sbjct: 413 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE 448
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 49 VHGHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+ GH +AV V F + +LAS S D+T+RLWD+ P+ T +GH N V + + +
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 108 YIACGSESNEVYVYHKEISK----PVTWHR 133
++ GS+S E+ ++ + + P+T H+
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHK 194
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH++ V++V F + + +ASAS D ++RLW+ V FRGH+ V + +S +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLL 417
Query: 110 ACGSESNEVYVYHKEISK 127
GS+ + + ++ K
Sbjct: 418 LSGSKDSTLKIWEIRTKK 435
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 48 CVHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
C+ GH AV+ VK+ + + + S D T+++W+ + +R +GH + N L +++E
Sbjct: 236 CLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWIN--SLALSTE 293
Query: 108 YI 109
Y+
Sbjct: 294 YV 295
>sp|Q25189|GBLP_HYDVU Guanine nucleotide-binding protein subunit beta-like protein
OS=Hydra vulgaris GN=RACK1 PE=2 SV=1
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 48 CVHGHKKAVSYVKFLSNDELA-SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS 106
C+ GH VS V S+ + A S S D TLRLWD+ + + + F GH + V + ++
Sbjct: 58 CLTGHNHFVSDVVLSSDGQFALSCSWDKTLRLWDLNQGITTKQFVGHTKDVLSVAFSADN 117
Query: 107 EYIACGSESNEVYVYH 122
I GS N + +++
Sbjct: 118 RQIVSGSRDNTIKLWN 133
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 34 GSSNYIAKYQST----APCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVR 88
GS I +Q++ + GH++ V+ V F + + LASAS+D +++LWD +
Sbjct: 1132 GSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLM 1191
Query: 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGS 148
T GH V + + + IA GSE V ++H++ K + +
Sbjct: 1192 TLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLL------------KTLNGHQ 1239
Query: 149 YFISAVCWKSDSPTMLTANSQGTIKVLVLA 178
+++++ + D T+ +A++ TIK+ +A
Sbjct: 1240 DWVNSLSFSPDGKTLASASADKTIKLWRIA 1269
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+ GH +V V F S+ + +ASAS D+T++LW+ + + + TF GH V +S
Sbjct: 1277 LKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN-RHGIELETFTGHSGGVYAVNFLPDSN 1335
Query: 108 YIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167
IA S N + ++ + + P+ + AG+ + AV + D + TA
Sbjct: 1336 IIASASLDNTIRLWQRPLISPL-------------EVLAGNSGVYAVSFLHDGSIIATAG 1382
Query: 168 SQGTIKV 174
+ G I++
Sbjct: 1383 ADGNIQL 1389
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 54 KAVSYVKFL-SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACG 112
KA+ + F D +ASA+ D T+++W V++ ++T GH NE N V + + + +A
Sbjct: 1405 KAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASA 1464
Query: 113 SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP---TMLTANSQ 169
S N V +++ V+ +F TDE V W S SP + +A++
Sbjct: 1465 SRDNTVKLWN------VSDGKFKKTLKGHTDE---------VFWVSFSPDGKIIASASAD 1509
Query: 170 GTIKV 174
TI++
Sbjct: 1510 KTIRL 1514
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
++GH+ V+ + F + + LASAS D T++LW + + V+T +GH + V + + +
Sbjct: 1235 LNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGK 1294
Query: 108 YIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167
IA S N + + W+R T G Y AV + DS + +A+
Sbjct: 1295 AIASASRDNTIKL----------WNRHGIELETFTGHSGGVY---AVNFLPDSNIIASAS 1341
Query: 168 SQGTIKV 174
TI++
Sbjct: 1342 LDNTIRL 1348
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V+ V F + + LASAS D+T++LW+V + +T +GH +E +V + + + I
Sbjct: 1444 GHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKII 1503
Query: 110 ACGSESNEVYVY 121
A S + ++
Sbjct: 1504 ASASADKTIRLW 1515
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
++GH+ AV V F + + +AS +D T++LW + ++T GH N V + + +
Sbjct: 1109 LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGK 1168
Query: 108 YIACGSESNEVYVY 121
+A S + + ++
Sbjct: 1169 NLASASSDHSIKLW 1182
Score = 37.7 bits (86), Expect = 0.042, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYH 122
LAS S D T++LW + + TF GH N + + YIA SE V ++
Sbjct: 1545 LASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQ 1600
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+ GHK V + + + +AS S D T++LW ++ RT GH + V + + +
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWS-RDGRLFRTLNGHEDAVYSVSFSPDGQ 1126
Query: 108 YIACGSESNEVYVYHKE---ISKPVTWHR------FSSPDMDDTDEDAGSYFISAVCWKS 158
IA G + ++ + K +T H + SPD + + + I W +
Sbjct: 1127 TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIK--LWDT 1184
Query: 159 DSPTM---LTANSQGTIKV 174
S + LT +S G I V
Sbjct: 1185 TSGQLLMTLTGHSAGVITV 1203
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 40 AKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKN 98
K++ T + GH V +V F + ++ ASAS D T+RLWD +++ H +
Sbjct: 1478 GKFKKT---LKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVY 1534
Query: 99 FVGLTVNSEYIACGSESNEVYVY 121
V + +A S V ++
Sbjct: 1535 SVNFNPDGSMLASTSADKTVKLW 1557
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA------------KYQSTAPCVHG 51
G VK+W R++A++ + V +N S I+ + + G
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 52 HKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLP----VRTFRG--HMNEKNFV--GL 102
H +V+ + S L S + D+T+R+WDV+ P VR F+G H EKN +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 103 TVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPT 162
+ + IA GS VYV W S + AGS I+ V + D P
Sbjct: 295 SPDGSKIAAGSADRFVYV----------WDTTSRRILYKLPGHAGS--INEVAFHPDEPI 342
Query: 163 MLTANS 168
+L+A+S
Sbjct: 343 ILSASS 348
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 29/181 (16%)
Query: 10 CTRQEASVLNID-MKANICCVKYNP--------GSSNYIAKYQSTAPC-----VHGHKKA 55
C+ +A ++ + + + C K++P G I + C + GH A
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA 112
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIAC-GS 113
V + + ++ L SASTD T+ +WD + V+ +GH + N + C GS
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS 172
Query: 114 ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIK 173
+ V ++ +I K F + +Y + AV + S +++ IK
Sbjct: 173 DDGTVKLW--DIRKKAAIQTFQN-----------TYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 174 V 174
V
Sbjct: 220 V 220
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 24 ANICCVKYNPGSSNYIA-------------KYQSTAPCVHGHKKAVSYVKFLSNDE-LAS 69
A++ CVK++P +SNY+A + ++ GH+ V + F N + LAS
Sbjct: 427 ADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLAS 485
Query: 70 ASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
A D L+LWD+ + RGH + + + +S IA S N V V+
Sbjct: 486 AGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V VKF N LA+ STD T+RLW ++ VR F GH + + N +Y+
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYL 483
Query: 110 ACGSESNEVYVY 121
A E + ++
Sbjct: 484 ASAGEDQRLKLW 495
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126
AS S D T RLW P+R + GH+ + + V NS Y+A GS V ++ +
Sbjct: 399 FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 458
Query: 127 KPV---TWHRFSSPDMDDTDEDAGSYFISA 153
V T HR P + + G Y SA
Sbjct: 459 NSVRLFTGHR--GPVLSLSFSPNGKYLASA 486
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+ GH V +FL++ L S S D ++R WD+ ++GH V ++ S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 108 YIACGSESNEVYVYHKEISKPVTWHRFSSPDMD 140
Y A GS ++ + + P+ + D+D
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVD 430
>sp|D1ZEB4|LIS11_SORMK Nuclear distribution protein PAC1-1 OS=Sordaria macrospora (strain
ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=PAC1-1
PE=3 SV=1
Length = 460
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 51 GHKKAVSYVKFL--SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH +VS V+F+ S + L SAS D TLR+WDV V+T RGH V + + +Y
Sbjct: 207 GHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSFDGKY 266
Query: 109 IACGSESNEVYVYHKEISKP 128
I S+ ++ ++ P
Sbjct: 267 ILSTSDDYTSRLWDVTVTNP 286
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 49 VHGHKKAVSYVKF---LSNDELASASTDSTLRLWDVKENLP-VRTFRGH 93
+ GH KAV V + N LAS S+D T++LWD ++ +RT GH
Sbjct: 160 IKGHTKAVLDVDYGGPRGNTLLASCSSDLTIKLWDPLDSYKNIRTLPGH 208
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 49 VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMN---EKNFVGLTV 104
+ H+ ++ V F LAS S D T+++WD + RT +GH + ++ G
Sbjct: 118 LQSHRDPITCVAFHPVFSSLASGSEDQTIKIWDWELGELERTIKGHTKAVLDVDYGGPRG 177
Query: 105 NSEYIACGSE 114
N+ +C S+
Sbjct: 178 NTLLASCSSD 187
>sp|P14197|AAC3_DICDI WD repeat-containing protein AAC3 OS=Dictyostelium discoideum
GN=AAC3 PE=2 SV=2
Length = 478
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 17 VLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKF-LSNDELASASTDST 75
+L + NI K+ P S+ ++ ++ ++GH ++ ++F + LA+ S DS
Sbjct: 327 ILMANSMGNIEAYKFLPKSTTHVKHLKT----LYGHTASIYCMEFDPTGKYLAAGSADSI 382
Query: 76 LRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV 129
+ LWD+++ + V+TF V + + ++IA S + + ++H E S+P+
Sbjct: 383 VSLWDIEDMMCVKTFIKSTFPCRSVSFSFDGQFIAASSFESTIEIFHIESSQPI 436
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 49 VHGHKKAVSYVKF--LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNF-VGLTVN 105
+ GH ++ + + +ND LASA TD +++WDVK + T N +N V + +
Sbjct: 224 LKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVS--TNSENIDVRWSPD 281
Query: 106 SEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT 165
++I + + + + K + ++F+ +++ V W ++ +L
Sbjct: 282 GQFIVACTRDDHLALIDLPTIKTLKIYKFNGEELNQ------------VGWDNNGDLILM 329
Query: 166 ANSQGTIK 173
ANS G I+
Sbjct: 330 ANSMGNIE 337
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 50 HGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH V+ V F + LAS S+D T+RLWD+ + + TF+GH N N V +
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSM 1298
Query: 109 IACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS 168
+A GS V ++ EIS H F + ++S+V + D + + +
Sbjct: 1299 LASGSGDQTVRLW--EISSSKCLHTFQ----------GHTSWVSSVTFSPDGTMLASGSD 1346
Query: 169 QGTIKV 174
T+++
Sbjct: 1347 DQTVRL 1352
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 31 YNPGSSNYIAKYQSTAP-----CVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKEN 84
+ G S I ++ A GH V+ V F + + LAS S D T+RLWD+
Sbjct: 879 FATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSG 938
Query: 85 LPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
++TF+GH + V + NS +A GS V ++
Sbjct: 939 QCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLW 975
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 29 VKYNP-------GSSNYIAKYQ--STAPCVH---GHKKAVSYVKFLSNDE-LASASTDST 75
V +NP GSS+ + S++ C+H GH V+ V F + LAS S D T
Sbjct: 1248 VVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQT 1307
Query: 76 LRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
+RLW++ + + TF+GH + + V + + +A GS+ V ++
Sbjct: 1308 VRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLW 1353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 44 STAPCVHGHKKAVSYVKFL----SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S+ C++ + S+V+FL + LA+ S+D +RLWD+ + T +GH N N
Sbjct: 1104 SSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNA 1163
Query: 100 VGLTVNSEYIACGSESNEVYVYHKEISK 127
V + + +A GS V ++ SK
Sbjct: 1164 VAFSPDGATLASGSGDQTVRLWDISSSK 1191
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 44 STAPCVH---GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S++ C+H GH VS V F + LAS S D T+RLW + + TF GH N
Sbjct: 1314 SSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGS 1373
Query: 100 VGLTVNSEYIACGSESNEVYVY 121
V + + +A GS V ++
Sbjct: 1374 VIFSPDGAILASGSGDQTVRLW 1395
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 44 STAPCVH---GHKKAVSYVKFLSND-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S+ C+ GH V V F N LAS S+D T+RLWD+ + F+GH
Sbjct: 936 SSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYS 995
Query: 100 VGLTVNSEYIACGSESNEVYVY 121
V ++ +A GS V ++
Sbjct: 996 VAFNLDGSMLATGSGDQTVRLW 1017
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 44 STAPCVH---GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S++ C++ GH V+ V F + LAS S+D T+RLW++ + + TF+GH + N
Sbjct: 1188 SSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNS 1247
Query: 100 VGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134
V + +A GS V ++ +IS H F
Sbjct: 1248 VVFNPDGSMLASGSSDKTVRLW--DISSSKCLHTF 1280
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 34 GSSNYIAKYQ--STAPCVH---GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPV 87
GSS+ I + S+ C++ GH V+ V F + LAS S D T+RLWD+ + +
Sbjct: 1134 GSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCL 1193
Query: 88 RTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
+GH + N V + +A GS V ++ SK
Sbjct: 1194 YILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSK 1233
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS 106
+HGH +V V F S+ LAS S D T++LWDVK ++T + +EK + G+ + S
Sbjct: 1448 LHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLK---SEKIYEGMNITS 1503
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 44 STAPCVH---GHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S+ C++ GH V + F + L AS S D T+RLW++ + T GH+N
Sbjct: 1398 SSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS 1457
Query: 100 VGLTVNSEYIACGSESNEVYVY 121
V + + +A GS+ + ++
Sbjct: 1458 VAFSSDGLILASGSDDETIKLW 1479
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 44 STAPCVH---GHKKAVSYVKF-LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S+ C++ GH V V F L LA+ S D T+RLWD+ + F+GH +
Sbjct: 978 SSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRS 1037
Query: 100 VGLTVNSEYIACGSESNEVYVY 121
V + + +A GS+ V ++
Sbjct: 1038 VVFSSDGAMLASGSDDQTVRLW 1059
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 44 STAPCVH---GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
S+ C++ GH V V F + LAS S D T+RLW + + T +GH N
Sbjct: 1356 SSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGS 1415
Query: 100 VGLTVNSEYIACGSESNEVYVYH 122
+ + + +A GS+ V +++
Sbjct: 1416 IVFSPDGTLLASGSDDQTVRLWN 1438
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 50 HGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEY 108
GH V V F S+ LAS S D T+RLWD+ + T +GH + V + +
Sbjct: 1029 QGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAM 1088
Query: 109 IACGSESNEVYVY 121
+A G + V ++
Sbjct: 1089 LASGGDDQIVRLW 1101
Score = 33.1 bits (74), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+ GH V V F + LAS D +RLWD+ + T +G+ + F+ + N
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV 1129
Query: 108 YIACGSESNEVYVY 121
+A GS V ++
Sbjct: 1130 TLANGSSDQIVRLW 1143
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 51 GHKKAVSYVKF-LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH+ AV+ V F L+ LAS S DSTL +W +K F GH + V + + +
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 110 ACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ 169
A GS V ++ + T R A + + +V + SD +++TA+
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFR------------AHTATVRSVHFCSDGQSLVTASDD 124
Query: 170 GTIKV 174
T+KV
Sbjct: 125 KTVKV 129
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 52 HKKAVSYVKF-LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIA 110
H AV+ + F S + L +AS+DSTL++ D+ E + T GH V + EY A
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 111 CGSESNEVYVY 121
G +V V+
Sbjct: 288 SGGSDEQVMVW 298
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 41 KYQSTAPCVHGHKKAVSYVKF-LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNF 99
K QS A GHK AV+ V F S LAS S D T+R+W FR H
Sbjct: 49 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 100 VGLTVNSEYIACGSESNEVYVY--HKE-----ISKPVTWHRFS--SPD 138
V + + + S+ V V+ H++ +++ + W R + SPD
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 49 VHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS 106
+ GH+ VS VKFL D+L ASAS D T+R+W+V +R GH +++V +TV S
Sbjct: 192 LRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRMITGH---EDWVRMTVPS 247
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKE----NLPVRTFRGHMNEKNFVGLT 103
+ GH + V V F S LA+ S+D ++++WD ++ +T RGH + + V
Sbjct: 146 LKGHTREVWGVDFDSKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFL 205
Query: 104 VNSEYIACGSESNEVYVYH-------KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCW 156
+ IA S + ++ + I+ W R + P D T + S +A W
Sbjct: 206 PGDDLIASASRDKTIRIWEVATTFCIRMITGHEDWVRMTVPSTDGTLLGSCSSDNTARVW 265
Query: 157 KSDSPTM 163
S M
Sbjct: 266 DPTSGVM 272
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 45 TAPC---VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV 100
TAP + H+ ++ V F LASAS D+T+++WD + RT +GH E V
Sbjct: 97 TAPARYTLTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGV 156
Query: 101 GLTVNSEYIACGSESNEVYVY 121
++A S + V+
Sbjct: 157 DFDSKGSFLATCSSDLSIKVW 177
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
+A+ S D T+++WDV +RT GH + + + +++ S+ + V+
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTLSGHNDWIRGLVFHPSGKHLLSASDDKTIRVW 368
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 51 GHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH AVS V+F+ D+L SAS D T+R++DV VRT GH V + + +
Sbjct: 191 GHDHAVSAVRFMPGDQLIVSASRDRTIRVFDVASTHQVRTLSGHSEWVRCVIPSADGTML 250
Query: 110 ACGSESNEVYVYHKEISKP 128
A GS+ V ++ +P
Sbjct: 251 ASGSKDQTVRLWDPLTGEP 269
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 21/45 (46%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIAC 111
LAS S D T+RLWD P RGH N+ V S Y A
Sbjct: 250 LASGSKDQTVRLWDPLTGEPKSELRGHENDVEAVAFAPISAYAAI 294
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 40 AKYQSTAPCVH---GHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMN 95
A + AP H GH+ ++ + F LASAS D+T+++WD + RT +GH
Sbjct: 92 ADWLPRAPAAHVLTGHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTK 151
Query: 96 EKN 98
N
Sbjct: 152 PVN 154
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126
LAS + D T++LWD + +R GH N + + +Y+ S+ V V+
Sbjct: 312 LASGARDKTVKLWDTQTGQMIRNLAGHDNWVRALAFHPSGKYLLSSSDDKTVRVWELSTG 371
Query: 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCW 156
+ + R +A S+F++A+ W
Sbjct: 372 RCL---RIV---------EAHSHFVAALAW 389
>sp|Q4ICM0|LIS1_GIBZE Nuclear distribution protein PAC1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PAC1 PE=3
SV=2
Length = 460
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 51 GHKKAVSYVKF---------LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVG 101
GH +VS V+F LS + LASAS D T+R+WDV V+T RGH + V
Sbjct: 199 GHDHSVSAVRFIPSGAPGAPLSGNLLASASRDVTVRIWDVTTGYCVKTIRGHADWIRDVS 258
Query: 102 LTVNSEYIACGSESNEVYVYHKEISKP 128
+++ +Y+ V ++ + P
Sbjct: 259 PSLDGKYLLSTGNDRTVRLWDISVPNP 285
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 25/123 (20%)
Query: 49 VHGHKKAV---SYVKFLSNDELASASTDSTLRLWD-VKENLPVRTFRGHMNEKNFV---- 100
V GH KAV Y + LAS S+D T++LWD E +RT GH + + V
Sbjct: 152 VKGHTKAVLDLDYGGPKGHTLLASCSSDLTIKLWDPANEYQNIRTLPGHDHSVSAVRFIP 211
Query: 101 ----GLTVNSEYIACGSESNEVYVYH-------KEISKPVTWHRFSSPDMDDTDEDAGSY 149
G ++ +A S V ++ K I W R SP +D G Y
Sbjct: 212 SGAPGAPLSGNLLASASRDVTVRIWDVTTGYCVKTIRGHADWIRDVSPSLD------GKY 265
Query: 150 FIS 152
+S
Sbjct: 266 LLS 268
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 49 VHGHKKAVSYVKFL-SNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE 107
+HGH VS + FL S D L SAS D T+++W++ V+TF+GH V +
Sbjct: 186 LHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADGS 245
Query: 108 YIACGSESNEVYVY 121
IA S + V+
Sbjct: 246 LIASCSNDQTIRVW 259
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH AV + F + LAS+S D T++LWD + +RT GH + + + + +++
Sbjct: 146 GHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHL 205
Query: 110 ACGSESNEVYVY 121
S + ++
Sbjct: 206 VSASRDKTIKMW 217
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 46 APCVHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVN 105
A V G KKA+S FL SAS D ++++WDV + + T GH N V
Sbjct: 294 AAGVEGGKKAMSPGPFL-----VSASRDKSIKIWDVSAGVCLVTLVGHDNWVRAVMFHPG 348
Query: 106 SEYIACGSESNEVYVY---HKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPT 162
++I S+ + ++ +K +K + H +F++ + + +P
Sbjct: 349 GKFIVSCSDDKTLRIWDYKNKRCAKTLVAH---------------EHFVTTLDFHKSAPF 393
Query: 163 MLTANSQGTIKV 174
+ T + T+KV
Sbjct: 394 VATGSVDLTLKV 405
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKN--FVGLTV-NSEYIAC 111
VS+VKF N + + +A+ D+TL+LWD + ++T+ H NEK F +V ++I
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 112 GSESNEVYVYH---KEISKPVTWH 132
GSE N VY+++ KE+ + + H
Sbjct: 277 GSEDNLVYIWNLQTKEVVQKLQGH 300
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 38 YIAKYQSTAPCVHGHKKAVSYVKFLSNDEL-ASASTDSTLRLWDVKENLPVRTFRGHMNE 96
Y K++ T + GHK +S V + S+ L SAS D TL++WDV ++T +GH N
Sbjct: 75 YDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISK 127
S I GS V ++ + K
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 33 PGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFR 91
P NY K+ + GH KAVS VKF N E LAS+S D +++W + +T
Sbjct: 30 PVKPNYTLKFT-----LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
Query: 92 GHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
GH + V + +S + S+ + ++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 81 VKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYV---YHKEISKPVTWHRFSS 136
VK N ++ T GH + V + N E++A S + + Y + K ++ H+
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG- 89
Query: 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174
IS V W SDS +++A+ T+K+
Sbjct: 90 --------------ISDVAWSSDSNLLVSASDDKTLKI 113
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 24 ANICCVKYNPGSSNYIAKYQS----------TAPCVH---GHKKAVSYVKFLSNDE-LAS 69
A++ C +Y+P +SNY+A + CV GHK + + F N LA+
Sbjct: 629 ADVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLAT 687
Query: 70 ASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
+TD + LWD+ L V +GH + + + + E +A GS N V ++
Sbjct: 688 GATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 51 GHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI 109
GH V+ ++ N +A+ S D T+RLWDV VR F GH + + + N ++
Sbjct: 626 GHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 685
Query: 110 ACGSESNEVYVY 121
A G+ V ++
Sbjct: 686 ATGATDGRVLLW 697
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121
S D RLW P+R F GH+ + N NS Y+A GS V ++
Sbjct: 601 FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLW 655
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 49 VHGHKKAVSYVKFLSNDE-LASASTDSTLRLWD-VK--ENLPVRTF---RGHMNEKNFVG 101
+ GH V ++F + E LAS S D+T+RLWD VK E+L F GH+N
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHIN------ 761
Query: 102 LTVNSEYIACGS 113
L NS+ + G+
Sbjct: 762 LPENSQELLLGT 773
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIA------------KYQSTAPCVHG 51
G VK+W R++A+V + V +N S I+ + + G
Sbjct: 175 GTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 52 HKKAVSYVKFLSNDE-LASASTDSTLRLWDVKENLP----VRTFRG--HMNEKNFV--GL 102
H +V+ + S L S + D+T+R+WDV+ P V+ F+G H EKN +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 103 TVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPT 162
+ + IA GS VYV W S + AGS I+ V + D P
Sbjct: 295 SPDGSKIAAGSADRFVYV----------WDTTSRRVLYKLPGHAGS--INEVAFHPDEPI 342
Query: 163 MLTANS 168
+L+A+S
Sbjct: 343 ILSASS 348
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 29/181 (16%)
Query: 10 CTRQEASVLNID-MKANICCVKYNP--------GSSNYIAKYQSTAPC-----VHGHKKA 55
C+ +A ++ + + + C K++P G I + C + GH A
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA 112
Query: 56 VSYVKFLSNDE-LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIAC-GS 113
V + + ++ L SASTD T+ +WD + V+ +GH + N + C GS
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS 172
Query: 114 ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIK 173
+ V ++ +I K F + +Y + AV + S +++ IK
Sbjct: 173 DDGTVKLW--DIRKKAAVQTFQN-----------TYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 174 V 174
V
Sbjct: 220 V 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,634,821
Number of Sequences: 539616
Number of extensions: 2554226
Number of successful extensions: 9838
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 6939
Number of HSP's gapped (non-prelim): 3076
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)