Query 038439
Match_columns 179
No_of_seqs 326 out of 1148
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 19:14:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 100.0 8.8E-35 3E-39 204.5 21.5 167 1-178 154-342 (365)
2 3ow8_A WD repeat-containing pr 100.0 8.3E-34 2.8E-38 196.4 23.4 166 1-178 141-320 (321)
3 3ow8_A WD repeat-containing pr 100.0 4E-34 1.4E-38 198.0 21.8 167 1-179 99-279 (321)
4 4gqb_B Methylosome protein 50; 100.0 6.6E-34 2.3E-38 198.5 21.7 166 1-179 146-331 (344)
5 4gqb_B Methylosome protein 50; 100.0 7.6E-34 2.6E-38 198.2 21.6 167 1-179 100-289 (344)
6 1got_B GT-beta; complex (GTP-b 100.0 6.6E-33 2.3E-37 193.2 23.8 167 1-179 74-257 (340)
7 4g56_B MGC81050 protein; prote 100.0 1.9E-33 6.4E-38 197.2 20.8 165 1-178 158-342 (357)
8 3frx_A Guanine nucleotide-bind 100.0 1.2E-32 4E-37 190.5 24.0 179 1-179 84-317 (319)
9 2ynn_A Coatomer subunit beta'; 100.0 1.1E-32 3.8E-37 189.4 22.3 168 1-179 32-217 (304)
10 1got_B GT-beta; complex (GTP-b 100.0 1.4E-32 4.8E-37 191.6 22.7 164 1-176 161-340 (340)
11 1vyh_C Platelet-activating fac 100.0 1.3E-32 4.4E-37 196.1 22.8 167 1-179 127-327 (410)
12 2ynn_A Coatomer subunit beta'; 100.0 2.4E-32 8.2E-37 187.7 22.7 167 1-179 74-259 (304)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-32 4.9E-37 191.9 21.4 167 1-177 35-223 (345)
14 4ery_A WD repeat-containing pr 100.0 7E-32 2.4E-36 185.8 23.9 168 1-179 42-223 (312)
15 1vyh_C Platelet-activating fac 100.0 2.7E-32 9.3E-37 194.5 21.6 167 1-179 169-369 (410)
16 2pbi_B Guanine nucleotide-bind 100.0 5.6E-32 1.9E-36 189.5 22.4 166 1-178 83-270 (354)
17 1nr0_A Actin interacting prote 100.0 5.5E-32 1.9E-36 201.4 22.9 174 1-179 78-270 (611)
18 2hes_X YDR267CP; beta-propelle 100.0 2.5E-31 8.7E-36 184.5 22.8 168 1-178 31-229 (330)
19 2pbi_B Guanine nucleotide-bind 100.0 2.4E-31 8.3E-36 186.3 22.6 164 1-176 173-354 (354)
20 3iz6_a 40S ribosomal protein R 100.0 1.4E-31 4.7E-36 189.1 21.2 170 1-178 177-374 (380)
21 4aow_A Guanine nucleotide-bind 100.0 7.7E-31 2.6E-35 182.0 23.1 179 1-179 58-337 (340)
22 3frx_A Guanine nucleotide-bind 100.0 8.4E-31 2.9E-35 181.2 22.1 166 1-179 37-227 (319)
23 4g56_B MGC81050 protein; prote 100.0 2.8E-31 9.5E-36 186.2 18.7 167 1-179 112-301 (357)
24 1erj_A Transcriptional repress 100.0 1.2E-30 4E-35 185.1 21.6 178 1-179 142-341 (393)
25 2pm7_B Protein transport prote 100.0 2.5E-30 8.6E-35 177.1 22.1 170 1-178 74-284 (297)
26 3iz6_a 40S ribosomal protein R 100.0 2.8E-31 9.6E-36 187.5 16.9 167 1-179 85-280 (380)
27 3vl1_A 26S proteasome regulato 100.0 1.1E-30 3.7E-35 186.1 18.6 168 1-179 116-322 (420)
28 2xzm_R RACK1; ribosome, transl 100.0 1.7E-29 5.7E-34 176.2 23.2 164 1-178 46-243 (343)
29 2ymu_A WD-40 repeat protein; u 100.0 4.8E-30 1.7E-34 189.3 21.5 161 1-176 404-577 (577)
30 1erj_A Transcriptional repress 100.0 1E-29 3.6E-34 180.2 21.7 165 1-178 184-388 (393)
31 2hes_X YDR267CP; beta-propelle 100.0 1E-29 3.4E-34 176.5 21.2 174 1-178 77-279 (330)
32 3dwl_C Actin-related protein 2 100.0 1.2E-30 4.2E-35 183.6 15.8 177 1-179 30-236 (377)
33 2xzm_R RACK1; ribosome, transl 100.0 4.6E-29 1.6E-33 174.0 23.4 163 1-178 95-284 (343)
34 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-29 1E-33 175.1 22.2 178 1-178 80-282 (345)
35 2pm7_B Protein transport prote 100.0 5.6E-29 1.9E-33 170.4 21.7 168 1-178 28-237 (297)
36 1nr0_A Actin interacting prote 100.0 5.1E-29 1.7E-33 185.5 22.4 172 4-178 129-354 (611)
37 3dm0_A Maltose-binding peripla 100.0 4.5E-29 1.5E-33 188.1 21.7 165 1-179 449-632 (694)
38 4e54_B DNA damage-binding prot 100.0 1.3E-29 4.5E-34 181.8 17.7 168 1-178 139-326 (435)
39 3ei3_B DNA damage-binding prot 100.0 8.4E-29 2.9E-33 174.7 21.6 164 1-178 93-281 (383)
40 4ery_A WD repeat-containing pr 100.0 1.6E-28 5.4E-33 169.0 22.3 152 16-179 15-180 (312)
41 3k26_A Polycomb protein EED; W 100.0 3E-29 1E-33 175.3 18.5 170 1-179 135-366 (366)
42 2aq5_A Coronin-1A; WD40 repeat 100.0 3.7E-29 1.3E-33 177.7 19.0 168 1-178 54-253 (402)
43 3bg1_A Protein SEC13 homolog; 100.0 1.9E-29 6.6E-34 174.1 17.1 167 1-178 78-292 (316)
44 1gxr_A ESG1, transducin-like e 100.0 1.4E-28 4.6E-33 170.3 21.4 163 3-178 71-254 (337)
45 3jrp_A Fusion protein of prote 100.0 1.7E-28 5.7E-33 172.3 22.0 171 1-178 76-286 (379)
46 3dm0_A Maltose-binding peripla 100.0 1.3E-28 4.6E-33 185.6 22.4 167 1-179 402-592 (694)
47 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-28 7.7E-33 169.4 21.9 178 1-179 30-337 (351)
48 1gxr_A ESG1, transducin-like e 100.0 4.6E-28 1.6E-32 167.6 23.1 164 1-178 160-336 (337)
49 4ggc_A P55CDC, cell division c 100.0 3.8E-28 1.3E-32 167.0 22.5 165 2-178 43-314 (318)
50 4gga_A P55CDC, cell division c 100.0 3.5E-28 1.2E-32 173.7 22.6 117 49-178 272-394 (420)
51 1r5m_A SIR4-interacting protei 100.0 1.1E-28 3.7E-33 175.5 19.9 166 1-178 224-424 (425)
52 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-28 3.8E-33 175.3 19.8 168 1-179 101-299 (402)
53 1sq9_A Antiviral protein SKI8; 100.0 7.9E-29 2.7E-33 175.3 18.6 177 1-179 145-395 (397)
54 2ymu_A WD-40 repeat protein; u 100.0 4.2E-28 1.4E-32 179.0 22.4 162 2-178 364-538 (577)
55 3vl1_A 26S proteasome regulato 100.0 1.3E-28 4.4E-33 175.4 19.0 178 2-179 76-278 (420)
56 4aez_A CDC20, WD repeat-contai 100.0 3.3E-28 1.1E-32 172.8 20.8 168 1-179 193-380 (401)
57 2pm9_A Protein WEB1, protein t 100.0 2.4E-29 8.2E-34 178.8 14.7 179 1-179 185-414 (416)
58 3lrv_A PRE-mRNA-splicing facto 100.0 7.5E-29 2.6E-33 172.9 16.9 163 1-179 55-244 (343)
59 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-27 4.6E-32 166.5 22.7 168 1-178 92-291 (343)
60 1k8k_C P40, ARP2/3 complex 41 100.0 8.6E-28 2.9E-32 168.5 21.7 166 1-178 27-232 (372)
61 3bg1_A Protein SEC13 homolog; 100.0 1.6E-28 5.3E-33 169.6 17.4 168 1-178 32-246 (316)
62 4a11_B DNA excision repair pro 100.0 2.1E-27 7E-32 168.2 23.5 179 1-179 119-365 (408)
63 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-27 4.5E-32 167.4 22.1 162 1-178 78-270 (355)
64 4aez_A CDC20, WD repeat-contai 100.0 7.7E-28 2.6E-32 171.0 21.0 165 2-179 111-336 (401)
65 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-27 7.2E-32 162.9 21.6 163 1-179 121-296 (313)
66 3k26_A Polycomb protein EED; W 100.0 4.5E-28 1.5E-32 169.4 18.5 175 2-178 42-259 (366)
67 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-27 3.7E-32 167.9 20.2 166 1-179 71-274 (372)
68 4e54_B DNA damage-binding prot 100.0 1.3E-28 4.5E-33 176.6 15.6 178 1-179 184-430 (435)
69 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-28 7.5E-33 178.7 16.8 169 1-179 180-386 (524)
70 3i2n_A WD repeat-containing pr 100.0 4.4E-28 1.5E-32 169.0 17.7 179 1-179 136-353 (357)
71 2j04_B YDR362CP, TAU91; beta p 100.0 9.6E-29 3.3E-33 180.6 14.8 165 1-178 232-427 (524)
72 3gre_A Serine/threonine-protei 100.0 2.8E-28 9.7E-33 174.7 17.0 167 1-178 83-291 (437)
73 3jrp_A Fusion protein of prote 100.0 2.6E-27 9E-32 166.2 21.5 169 1-179 30-240 (379)
74 2pm9_A Protein WEB1, protein t 100.0 2.5E-28 8.4E-33 173.6 15.8 167 1-179 133-337 (416)
75 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.5E-27 1.2E-31 169.9 21.8 176 1-177 122-337 (450)
76 3v7d_B Cell division control p 100.0 5.8E-27 2E-31 169.0 22.8 164 1-179 139-341 (464)
77 1pgu_A Actin interacting prote 100.0 2.9E-27 1E-31 175.3 21.8 170 1-179 85-283 (615)
78 2w18_A PALB2, fancn, partner a 100.0 4.4E-27 1.5E-31 161.3 20.7 167 4-178 135-356 (356)
79 2oaj_A Protein SNI1; WD40 repe 100.0 9.7E-28 3.3E-32 185.1 19.2 177 1-179 36-242 (902)
80 1r5m_A SIR4-interacting protei 100.0 1.8E-27 6E-32 169.3 19.0 164 1-178 168-360 (425)
81 2xyi_A Probable histone-bindin 100.0 3.1E-27 1E-31 169.3 20.4 166 1-178 148-352 (430)
82 3i2n_A WD repeat-containing pr 100.0 2.5E-27 8.4E-32 165.2 19.2 164 2-178 42-242 (357)
83 3dwl_C Actin-related protein 2 100.0 4.1E-28 1.4E-32 170.7 15.0 163 1-177 74-279 (377)
84 3zwl_B Eukaryotic translation 100.0 1.3E-26 4.6E-31 162.0 22.4 165 1-178 93-303 (369)
85 3zwl_B Eukaryotic translation 100.0 8.3E-27 2.9E-31 163.0 21.4 167 1-179 51-249 (369)
86 2xyi_A Probable histone-bindin 100.0 1.2E-26 4E-31 166.3 22.4 177 1-178 201-409 (430)
87 3dw8_B Serine/threonine-protei 100.0 5.3E-27 1.8E-31 168.2 20.4 176 1-178 47-314 (447)
88 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.9E-27 2E-31 168.7 20.6 143 25-179 104-271 (450)
89 1sq9_A Antiviral protein SKI8; 100.0 4.3E-27 1.5E-31 166.4 19.6 179 1-179 88-322 (397)
90 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-27 9.1E-32 180.7 19.8 166 2-178 33-216 (814)
91 3ei3_B DNA damage-binding prot 100.0 2.4E-27 8E-32 167.3 18.1 165 1-179 182-382 (383)
92 4a11_B DNA excision repair pro 100.0 2.1E-26 7.2E-31 163.0 23.1 179 1-179 63-276 (408)
93 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-26 8E-31 157.7 22.4 163 1-179 36-255 (313)
94 3dw8_B Serine/threonine-protei 100.0 1.9E-27 6.5E-32 170.5 17.4 157 21-179 175-373 (447)
95 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-26 3.7E-31 184.2 22.8 178 1-178 634-870 (1249)
96 3jro_A Fusion protein of prote 100.0 3.5E-27 1.2E-31 179.3 19.0 171 1-178 74-284 (753)
97 3mmy_A MRNA export factor; mRN 100.0 1.5E-26 5.3E-31 161.6 20.8 179 1-179 61-304 (368)
98 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-26 4.7E-31 176.8 21.8 167 1-179 74-259 (814)
99 3v7d_B Cell division control p 100.0 7.2E-26 2.5E-30 163.3 22.5 163 1-179 180-381 (464)
100 1pgu_A Actin interacting prote 99.9 9.1E-26 3.1E-30 167.3 21.8 162 3-179 426-614 (615)
101 3gre_A Serine/threonine-protei 99.9 8.4E-27 2.9E-31 167.0 15.7 175 1-176 189-437 (437)
102 1yfq_A Cell cycle arrest prote 99.9 2.8E-26 9.5E-31 159.2 17.6 165 1-178 30-224 (342)
103 3sfz_A APAF-1, apoptotic pepti 99.9 6.8E-27 2.3E-31 185.4 16.3 166 2-179 981-1158(1249)
104 3jro_A Fusion protein of prote 99.9 5.5E-26 1.9E-30 172.7 20.5 169 1-179 28-238 (753)
105 3f3f_A Nucleoporin SEH1; struc 99.9 1.3E-25 4.4E-30 155.5 20.1 158 21-178 9-248 (351)
106 1yfq_A Cell cycle arrest prote 99.9 1.4E-25 4.7E-30 155.8 19.5 174 1-179 76-282 (342)
107 3vu4_A KMHSV2; beta-propeller 99.9 1.6E-25 5.3E-30 156.9 18.6 173 2-178 117-335 (355)
108 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.1E-24 3.9E-29 156.5 22.0 160 1-179 136-308 (445)
109 1p22_A F-BOX/WD-repeat protein 99.9 6E-25 2.1E-29 157.6 20.5 159 1-178 190-364 (435)
110 4gq1_A NUP37; propeller, trans 99.9 9.9E-26 3.4E-30 159.9 16.2 164 1-177 163-387 (393)
111 1p22_A F-BOX/WD-repeat protein 99.9 1.2E-24 4E-29 156.1 21.3 160 1-179 150-325 (435)
112 4h5i_A Guanine nucleotide-exch 99.9 7.1E-25 2.4E-29 154.1 19.6 167 2-179 102-300 (365)
113 1l0q_A Surface layer protein; 99.9 2.4E-24 8.3E-29 152.1 22.4 165 1-179 9-189 (391)
114 4aow_A Guanine nucleotide-bind 99.9 7.2E-25 2.5E-29 151.9 18.7 165 14-179 28-246 (340)
115 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.3E-24 1.1E-28 154.1 22.4 167 1-179 256-442 (445)
116 1l0q_A Surface layer protein; 99.9 4.4E-24 1.5E-28 150.8 22.3 164 2-179 52-233 (391)
117 3mmy_A MRNA export factor; mRN 99.9 5.3E-25 1.8E-29 153.8 17.1 164 1-176 105-343 (368)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.6E-25 5.4E-30 162.4 13.9 159 3-178 63-253 (588)
119 2oaj_A Protein SNI1; WD40 repe 99.9 2.4E-24 8.3E-29 166.3 20.6 176 1-177 76-310 (902)
120 2j04_A TAU60, YPL007P, hypothe 99.9 5.9E-25 2E-29 159.5 15.5 157 1-178 34-210 (588)
121 4gq1_A NUP37; propeller, trans 99.9 8.6E-25 2.9E-29 155.0 15.8 177 1-179 108-348 (393)
122 3bws_A Protein LP49; two-domai 99.9 7.8E-23 2.7E-27 146.2 22.3 164 2-179 232-432 (433)
123 3bws_A Protein LP49; two-domai 99.9 5.2E-22 1.8E-26 141.9 20.5 164 2-179 189-390 (433)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-21 4E-26 139.9 22.2 162 4-179 159-344 (415)
125 2w18_A PALB2, fancn, partner a 99.9 7.9E-22 2.7E-26 135.4 17.1 165 3-179 62-269 (356)
126 2oit_A Nucleoporin 214KDA; NH2 99.9 5.6E-22 1.9E-26 142.3 16.1 153 20-178 89-277 (434)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.9E-21 1.7E-25 136.7 20.1 160 4-178 203-386 (415)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-22 8.6E-27 144.1 13.2 143 24-178 37-222 (434)
129 4ggc_A P55CDC, cell division c 99.9 1.8E-20 6E-25 128.7 18.2 139 26-179 28-181 (318)
130 4gga_A P55CDC, cell division c 99.9 2.6E-20 8.8E-25 133.1 18.5 138 26-178 108-260 (420)
131 2ojh_A Uncharacterized protein 99.9 1.1E-19 3.7E-24 123.2 18.7 163 1-178 19-203 (297)
132 3vgz_A Uncharacterized protein 99.9 3.9E-19 1.3E-23 123.7 20.4 169 3-179 68-262 (353)
133 1pby_B Quinohemoprotein amine 99.8 4.7E-19 1.6E-23 122.4 18.3 161 2-179 54-310 (337)
134 1ri6_A Putative isomerase YBHE 99.8 4.3E-19 1.5E-23 122.9 17.2 166 2-178 13-208 (343)
135 3vgz_A Uncharacterized protein 99.8 1.8E-18 6.3E-23 120.3 20.2 164 2-179 109-303 (353)
136 2ojh_A Uncharacterized protein 99.8 9.7E-19 3.3E-23 118.5 17.8 165 2-178 60-257 (297)
137 3u4y_A Uncharacterized protein 99.8 2.3E-18 7.8E-23 119.1 19.8 168 2-179 18-207 (331)
138 1nir_A Nitrite reductase; hemo 99.8 2.4E-18 8.2E-23 126.6 20.1 166 2-179 157-355 (543)
139 1pby_B Quinohemoprotein amine 99.8 2.7E-18 9.3E-23 118.6 19.3 173 2-179 9-269 (337)
140 1xfd_A DIP, dipeptidyl aminope 99.8 5.9E-19 2E-23 133.5 16.1 171 1-178 34-288 (723)
141 1nir_A Nitrite reductase; hemo 99.8 3.2E-18 1.1E-22 125.9 18.6 173 2-179 300-514 (543)
142 2z3z_A Dipeptidyl aminopeptida 99.8 6.1E-19 2.1E-23 133.2 14.4 164 2-179 43-293 (706)
143 2ecf_A Dipeptidyl peptidase IV 99.8 1.9E-18 6.3E-23 131.2 15.2 162 5-178 65-320 (741)
144 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-17 4.4E-22 115.8 17.6 160 2-179 63-325 (349)
145 2z3z_A Dipeptidyl aminopeptida 99.8 2.8E-18 9.5E-23 129.6 13.7 170 2-178 99-341 (706)
146 1ri6_A Putative isomerase YBHE 99.8 3.5E-17 1.2E-21 113.3 17.8 164 2-178 104-307 (343)
147 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-17 7.9E-22 114.5 16.8 128 2-133 19-183 (349)
148 3u4y_A Uncharacterized protein 99.8 5.7E-17 1.9E-21 112.0 18.6 165 2-179 60-252 (331)
149 1k32_A Tricorn protease; prote 99.8 3E-17 1E-21 128.9 16.7 161 3-177 316-500 (1045)
150 3o4h_A Acylamino-acid-releasin 99.8 5.9E-17 2E-21 120.1 17.4 158 3-178 43-226 (582)
151 1k32_A Tricorn protease; prote 99.8 2.2E-17 7.5E-22 129.6 15.3 161 3-178 264-460 (1045)
152 2ecf_A Dipeptidyl peptidase IV 99.8 2.2E-17 7.4E-22 125.4 13.8 166 4-178 129-366 (741)
153 3hfq_A Uncharacterized protein 99.8 3.8E-16 1.3E-20 108.7 19.1 167 2-178 14-217 (347)
154 3scy_A Hypothetical bacterial 99.8 3.6E-16 1.2E-20 109.4 18.9 166 2-178 118-336 (361)
155 1z68_A Fibroblast activation p 99.7 4.6E-17 1.6E-21 123.3 14.7 170 2-176 34-284 (719)
156 3hfq_A Uncharacterized protein 99.7 1.7E-15 5.7E-20 105.5 20.7 173 2-178 61-270 (347)
157 3o4h_A Acylamino-acid-releasin 99.7 1.1E-16 3.9E-21 118.6 14.0 154 3-177 131-313 (582)
158 1xfd_A DIP, dipeptidyl aminope 99.7 1E-16 3.4E-21 121.4 13.9 162 3-176 90-341 (723)
159 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.4E-15 1.2E-19 104.8 18.5 167 2-178 117-340 (365)
160 4a5s_A Dipeptidyl peptidase 4 99.7 3.1E-15 1.1E-19 113.9 19.3 172 3-179 35-294 (740)
161 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-13 5.3E-18 93.1 21.3 161 3-178 99-279 (286)
162 3scy_A Hypothetical bacterial 99.7 2.6E-13 9E-18 94.9 22.7 167 3-178 74-290 (361)
163 1z68_A Fibroblast activation p 99.6 1.9E-15 6.6E-20 114.5 11.3 165 3-177 89-344 (719)
164 3no2_A Uncharacterized protein 99.6 5E-14 1.7E-18 95.4 17.0 162 1-178 12-194 (276)
165 3azo_A Aminopeptidase; POP fam 99.6 2.7E-14 9.2E-19 107.3 16.7 163 2-177 45-272 (662)
166 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.8E-14 2.3E-18 98.2 17.3 167 4-178 14-223 (365)
167 2oiz_A Aromatic amine dehydrog 99.6 7.9E-14 2.7E-18 97.9 17.2 86 3-89 30-146 (361)
168 4a5s_A Dipeptidyl peptidase 4 99.6 2.9E-14 1E-18 108.5 15.6 165 4-178 92-352 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.6 3.8E-13 1.3E-17 93.2 18.5 164 3-178 68-276 (329)
170 3azo_A Aminopeptidase; POP fam 99.6 1.3E-13 4.4E-18 103.6 15.1 170 3-177 101-321 (662)
171 3pe7_A Oligogalacturonate lyas 99.6 3.7E-14 1.3E-18 99.9 10.7 173 3-177 167-380 (388)
172 1q7f_A NHL, brain tumor CG1071 99.5 7.9E-12 2.7E-16 84.7 20.8 162 2-177 49-236 (286)
173 3fvz_A Peptidyl-glycine alpha- 99.5 3.1E-12 1.1E-16 88.6 18.8 167 2-178 110-321 (329)
174 3dsm_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 88.5 18.0 161 2-178 62-252 (328)
175 3pe7_A Oligogalacturonate lyas 99.5 1.3E-12 4.3E-17 92.1 16.1 158 8-178 14-224 (388)
176 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.8E-17 91.8 15.8 131 25-178 39-190 (388)
177 3c5m_A Oligogalacturonate lyas 99.5 2.6E-12 8.9E-17 90.6 14.9 170 3-177 167-380 (396)
178 2gop_A Trilobed protease; beta 99.5 4.2E-12 1.4E-16 88.2 15.5 150 3-176 42-250 (347)
179 1qks_A Cytochrome CD1 nitrite 99.5 4.9E-11 1.7E-15 88.2 21.7 166 2-179 175-373 (567)
180 2dg1_A DRP35, lactonase; beta 99.5 4.7E-11 1.6E-15 82.5 20.2 160 2-178 25-212 (333)
181 1rwi_B Serine/threonine-protei 99.5 4.5E-11 1.5E-15 80.1 18.9 162 3-178 86-263 (270)
182 3dsm_A Uncharacterized protein 99.4 3E-11 1E-15 83.7 18.3 162 2-178 103-301 (328)
183 3c5m_A Oligogalacturonate lyas 99.4 1.5E-12 5.1E-17 91.8 10.9 163 4-178 60-272 (396)
184 3e5z_A Putative gluconolactona 99.4 1.2E-10 4.1E-15 79.3 17.5 157 3-177 89-284 (296)
185 1rwi_B Serine/threonine-protei 99.4 3.3E-10 1.1E-14 75.9 17.9 164 2-178 44-221 (270)
186 3e5z_A Putative gluconolactona 99.3 2.7E-10 9.2E-15 77.6 17.6 160 2-178 48-245 (296)
187 2xdw_A Prolyl endopeptidase; a 99.3 1.8E-10 6.1E-15 87.5 18.0 141 25-178 126-319 (710)
188 2xdw_A Prolyl endopeptidase; a 99.3 4.1E-10 1.4E-14 85.5 19.2 162 5-177 152-366 (710)
189 2bkl_A Prolyl endopeptidase; m 99.3 1.8E-10 6.1E-15 87.3 16.8 140 24-178 121-303 (695)
190 2mad_H Methylamine dehydrogena 99.3 1.9E-09 6.4E-14 76.0 20.8 162 3-179 96-350 (373)
191 2oiz_A Aromatic amine dehydrog 99.3 1.1E-10 3.6E-15 82.0 14.2 87 59-161 259-360 (361)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.3E-09 7.8E-14 73.3 20.4 162 4-178 92-298 (314)
193 3no2_A Uncharacterized protein 99.3 2.5E-09 8.5E-14 72.3 19.6 157 2-167 54-231 (276)
194 2gop_A Trilobed protease; beta 99.3 4.8E-10 1.6E-14 77.8 16.3 149 4-177 152-329 (347)
195 2dg1_A DRP35, lactonase; beta 99.3 1E-10 3.5E-15 80.8 12.3 143 25-177 7-169 (333)
196 1xip_A Nucleoporin NUP159; bet 99.3 1.7E-10 5.7E-15 81.4 13.4 147 5-165 59-230 (388)
197 2bkl_A Prolyl endopeptidase; m 99.3 4.7E-11 1.6E-15 90.5 10.7 116 51-177 118-259 (695)
198 3g4e_A Regucalcin; six bladed 99.2 4.9E-09 1.7E-13 71.5 18.5 154 3-168 72-261 (297)
199 3c75_H MADH, methylamine dehyd 99.2 1E-09 3.5E-14 78.3 15.3 51 116-179 350-402 (426)
200 3g4e_A Regucalcin; six bladed 99.2 1.1E-08 3.8E-13 69.8 19.7 167 3-178 34-228 (297)
201 2z2n_A Virginiamycin B lyase; 99.2 3.7E-08 1.3E-12 66.6 22.0 162 3-177 77-253 (299)
202 3hrp_A Uncharacterized protein 99.2 8.2E-09 2.8E-13 73.6 19.3 173 3-177 151-352 (409)
203 1yr2_A Prolyl oligopeptidase; 99.2 3.1E-09 1E-13 81.2 17.8 141 25-178 164-349 (741)
204 2hz6_A Endoplasmic reticulum t 99.2 2.7E-12 9.1E-17 90.4 0.0 158 2-178 17-191 (369)
205 2z2n_A Virginiamycin B lyase; 99.2 5.3E-08 1.8E-12 65.9 21.1 161 3-177 35-211 (299)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.7E-08 5.9E-13 68.9 17.5 163 3-178 45-255 (314)
207 1qks_A Cytochrome CD1 nitrite 99.1 3.1E-09 1.1E-13 78.7 13.9 100 65-178 168-274 (567)
208 3sjl_D Methylamine dehydrogena 99.1 5.9E-09 2E-13 73.4 14.3 102 65-179 238-363 (386)
209 2iwa_A Glutamine cyclotransfer 99.1 7E-08 2.4E-12 64.6 18.7 171 3-178 43-236 (266)
210 1mda_H Methylamine dehydrogena 99.1 1.9E-08 6.5E-13 70.6 16.2 162 3-179 95-346 (368)
211 1yr2_A Prolyl oligopeptidase; 99.1 2E-08 6.9E-13 76.7 16.7 160 4-177 189-391 (741)
212 2ghs_A AGR_C_1268P; regucalcin 99.0 1.8E-07 6.1E-12 64.7 20.0 152 5-169 110-292 (326)
213 3dr2_A Exported gluconolactona 99.0 8.6E-08 2.9E-12 65.6 17.5 142 21-178 42-223 (305)
214 2qc5_A Streptogramin B lactona 99.0 6.3E-07 2.1E-11 60.6 21.7 161 3-177 40-216 (300)
215 2qc5_A Streptogramin B lactona 99.0 7.1E-07 2.4E-11 60.3 21.6 161 3-177 82-258 (300)
216 2ghs_A AGR_C_1268P; regucalcin 99.0 2.2E-07 7.6E-12 64.2 19.3 161 3-177 70-258 (326)
217 3sjl_D Methylamine dehydrogena 99.0 2.4E-08 8.2E-13 70.3 13.8 112 3-134 58-178 (386)
218 1fwx_A Nitrous oxide reductase 99.0 1.5E-07 5.1E-12 69.4 17.8 175 2-178 110-360 (595)
219 3nol_A Glutamine cyclotransfer 99.0 1.5E-07 5E-12 62.6 16.1 162 4-169 65-245 (262)
220 3dr2_A Exported gluconolactona 98.9 2.8E-07 9.5E-12 63.0 17.5 120 3-126 66-225 (305)
221 2ece_A 462AA long hypothetical 98.9 1.8E-07 6.3E-12 66.8 16.5 175 2-178 104-351 (462)
222 3hrp_A Uncharacterized protein 98.9 5.9E-07 2E-11 64.1 19.1 172 5-178 195-409 (409)
223 2mad_H Methylamine dehydrogena 98.9 1.2E-06 4.2E-11 61.7 19.8 160 5-177 48-241 (373)
224 3iuj_A Prolyl endopeptidase; h 98.9 1.5E-07 5.1E-12 71.5 15.6 162 3-178 154-358 (693)
225 3mbr_X Glutamine cyclotransfer 98.9 2E-06 6.9E-11 56.7 18.8 161 4-168 43-223 (243)
226 3nok_A Glutaminyl cyclase; bet 98.8 5.3E-07 1.8E-11 60.0 15.5 163 1-168 72-254 (268)
227 1kb0_A Quinohemoprotein alcoho 98.8 1.3E-07 4.4E-12 71.6 14.3 101 66-179 329-507 (677)
228 2iwa_A Glutamine cyclotransfer 98.8 9.2E-07 3.1E-11 59.2 16.8 154 14-179 9-181 (266)
229 3iuj_A Prolyl endopeptidase; h 98.8 1.9E-06 6.6E-11 65.5 19.1 160 4-178 208-404 (693)
230 2qe8_A Uncharacterized protein 98.7 3.3E-07 1.1E-11 63.8 12.3 157 3-170 92-312 (343)
231 2qe8_A Uncharacterized protein 98.7 9.2E-06 3.2E-10 56.5 19.0 153 24-176 17-223 (343)
232 1yiq_A Quinohemoprotein alcoho 98.7 4.4E-06 1.5E-10 63.5 17.4 101 66-179 321-505 (689)
233 2ece_A 462AA long hypothetical 98.7 1.7E-05 6E-10 56.8 19.0 109 58-176 142-286 (462)
234 1npe_A Nidogen, entactin; glyc 98.6 2.8E-05 9.6E-10 52.0 20.9 164 3-178 9-197 (267)
235 3c75_H MADH, methylamine dehyd 98.6 9.9E-08 3.4E-12 68.2 6.7 99 74-179 99-209 (426)
236 1mda_H Methylamine dehydrogena 98.6 8E-08 2.7E-12 67.5 6.1 106 66-178 34-157 (368)
237 1fwx_A Nitrous oxide reductase 98.6 3.5E-06 1.2E-10 62.2 14.4 122 3-125 174-361 (595)
238 3nol_A Glutamine cyclotransfer 98.5 2.1E-05 7.3E-10 52.3 15.7 152 15-179 32-201 (262)
239 3hxj_A Pyrrolo-quinoline quino 98.5 5.1E-06 1.7E-10 57.0 13.1 158 2-177 155-322 (330)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.6E-05 8.9E-10 54.7 16.6 129 2-134 61-216 (376)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.5 1.5E-05 5E-10 56.0 15.1 157 2-176 196-375 (376)
242 2hz6_A Endoplasmic reticulum t 98.5 2.1E-08 7.1E-13 70.6 0.4 66 65-132 10-75 (369)
243 1ijq_A LDL receptor, low-densi 98.5 9.5E-05 3.3E-09 50.8 22.3 165 2-178 8-194 (316)
244 1npe_A Nidogen, entactin; glyc 98.5 8.1E-05 2.8E-09 49.7 22.1 160 3-178 57-237 (267)
245 3nok_A Glutaminyl cyclase; bet 98.5 2.8E-06 9.5E-11 56.6 10.2 107 56-179 57-164 (268)
246 3v65_B Low-density lipoprotein 98.5 0.00013 4.4E-09 51.7 20.4 163 4-178 96-276 (386)
247 1kb0_A Quinohemoprotein alcoho 98.4 1.6E-05 5.6E-10 60.3 14.6 61 74-135 457-517 (677)
248 3v64_C Agrin; beta propeller, 98.4 0.00018 6.1E-09 50.3 22.4 163 4-178 53-233 (349)
249 3hxj_A Pyrrolo-quinoline quino 98.3 1.8E-05 6.2E-10 54.2 12.7 156 2-177 115-282 (330)
250 1yiq_A Quinohemoprotein alcoho 98.3 9.6E-05 3.3E-09 56.3 17.1 75 58-132 239-345 (689)
251 3mbr_X Glutamine cyclotransfer 98.3 0.0002 6.7E-09 47.3 16.8 153 15-179 10-179 (243)
252 1kv9_A Type II quinohemoprotei 98.2 0.00013 4.6E-09 55.3 16.3 101 66-179 316-488 (668)
253 2ad6_A Methanol dehydrogenase 98.2 4.8E-05 1.6E-09 56.6 13.6 101 66-179 318-494 (571)
254 2xe4_A Oligopeptidase B; hydro 98.2 8.3E-06 2.9E-10 62.6 9.3 112 55-178 175-303 (751)
255 3p5b_L Low density lipoprotein 98.2 0.00062 2.1E-08 48.5 22.1 163 4-178 92-276 (400)
256 2fp8_A Strictosidine synthase; 98.2 0.0002 6.9E-09 49.2 14.8 110 55-178 81-215 (322)
257 4hw6_A Hypothetical protein, I 98.1 0.0011 3.9E-08 47.6 18.9 172 4-176 162-371 (433)
258 3sov_A LRP-6, low-density lipo 98.1 0.00091 3.1E-08 46.1 19.5 164 3-178 12-196 (318)
259 2xe4_A Oligopeptidase B; hydro 98.1 0.0002 6.9E-09 55.0 14.2 102 25-126 175-305 (751)
260 1n7d_A LDL receptor, low-densi 98.0 4.7E-05 1.6E-09 58.0 9.8 164 3-178 385-570 (699)
261 3m0c_C LDL receptor, low-densi 98.0 0.0035 1.2E-07 48.5 21.9 162 4-177 404-587 (791)
262 3qqz_A Putative uncharacterize 97.9 0.0012 4.3E-08 43.9 14.5 120 51-177 24-149 (255)
263 3tc9_A Hypothetical hydrolase; 97.9 0.00085 2.9E-08 48.2 14.4 141 25-178 138-300 (430)
264 3tc9_A Hypothetical hydrolase; 97.9 0.0028 9.5E-08 45.6 16.5 121 4-124 159-300 (430)
265 1w6s_A Methanol dehydrogenase 97.8 0.0035 1.2E-07 47.0 16.3 52 115-179 452-503 (599)
266 1flg_A Protein (quinoprotein e 97.8 0.00062 2.1E-08 50.9 12.0 63 72-135 464-526 (582)
267 2p4o_A Hypothetical protein; p 97.7 0.0039 1.3E-07 42.5 17.9 160 3-177 52-240 (306)
268 3pbp_A Nucleoporin NUP82; beta 97.7 0.0014 4.7E-08 46.8 12.6 118 55-174 67-207 (452)
269 1kv9_A Type II quinohemoprotei 97.7 0.0017 5.7E-08 49.4 14.0 112 65-179 163-333 (668)
270 1w6s_A Methanol dehydrogenase 97.7 0.0075 2.6E-07 45.3 17.7 174 3-179 72-342 (599)
271 3amr_A 3-phytase; beta-propell 97.7 0.0057 1.9E-07 42.6 18.2 163 3-178 49-262 (355)
272 3qqz_A Putative uncharacterize 97.7 0.0048 1.6E-07 41.1 18.9 167 3-176 48-250 (255)
273 2ad6_A Methanol dehydrogenase 97.6 0.00046 1.6E-08 51.5 9.7 63 72-135 442-504 (571)
274 2fp8_A Strictosidine synthase; 97.6 0.0071 2.4E-07 41.4 18.0 130 25-168 81-248 (322)
275 2p9w_A MAL S 1 allergenic prot 97.6 0.0084 2.9E-07 41.4 15.2 116 56-178 65-214 (334)
276 2p4o_A Hypothetical protein; p 97.5 0.01 3.5E-07 40.4 14.4 111 54-177 32-145 (306)
277 1flg_A Protein (quinoprotein e 97.5 0.00052 1.8E-08 51.3 7.9 52 115-179 465-516 (582)
278 3pbp_A Nucleoporin NUP82; beta 97.5 0.0049 1.7E-07 44.0 12.2 99 73-178 40-157 (452)
279 3v65_B Low-density lipoprotein 97.4 0.015 5E-07 41.2 21.2 139 25-176 160-315 (386)
280 4hw6_A Hypothetical protein, I 97.4 0.012 4.3E-07 42.3 14.0 140 25-177 140-302 (433)
281 1k3i_A Galactose oxidase precu 97.4 0.0032 1.1E-07 47.7 11.3 110 58-178 190-322 (656)
282 3v64_C Agrin; beta propeller, 97.4 0.017 5.7E-07 40.3 21.3 140 24-176 116-272 (349)
283 4a0p_A LRP6, LRP-6, low-densit 97.3 0.03 1E-06 42.4 22.0 162 4-178 15-196 (628)
284 4a2l_A BT_4663, two-component 97.3 0.037 1.3E-06 42.9 21.5 164 5-178 283-479 (795)
285 2p9w_A MAL S 1 allergenic prot 97.3 0.008 2.7E-07 41.5 11.1 124 52-175 11-164 (334)
286 1tl2_A L10, protein (tachylect 97.2 0.012 4E-07 38.3 11.1 137 24-172 41-203 (236)
287 3s94_A LRP-6, low-density lipo 97.2 0.046 1.6E-06 41.3 20.3 163 3-177 17-200 (619)
288 1bpo_A Protein (clathrin); cla 97.2 0.037 1.3E-06 39.9 16.9 173 3-179 85-289 (494)
289 3kya_A Putative phosphatase; s 97.1 0.042 1.4E-06 40.3 15.2 140 26-177 141-339 (496)
290 1ijq_A LDL receptor, low-densi 97.1 0.032 1.1E-06 38.2 22.6 142 24-177 77-236 (316)
291 1n7d_A LDL receptor, low-densi 97.1 0.0078 2.7E-07 46.0 10.8 72 55-126 497-572 (699)
292 2xbg_A YCF48-like protein; pho 97.0 0.045 1.5E-06 37.7 16.6 141 23-176 162-319 (327)
293 1tl2_A L10, protein (tachylect 97.0 0.007 2.4E-07 39.4 8.1 110 54-173 41-157 (236)
294 2xzh_A Clathrin heavy chain 1; 96.9 0.051 1.8E-06 37.7 17.3 67 96-174 261-327 (365)
295 4a2l_A BT_4663, two-component 96.9 0.11 3.6E-06 40.4 21.5 145 23-178 356-525 (795)
296 3ei3_A DNA damage-binding prot 96.8 0.15 5.1E-06 41.5 18.7 160 4-178 807-998 (1158)
297 3v9f_A Two-component system se 96.7 0.13 4.6E-06 39.7 19.8 162 4-177 383-566 (781)
298 3a9g_A Putative uncharacterize 96.6 0.047 1.6E-06 38.1 11.1 104 54-167 29-153 (354)
299 1bpo_A Protein (clathrin); cla 96.5 0.13 4.5E-06 37.2 20.4 160 3-174 124-326 (494)
300 3p5b_L Low density lipoprotein 96.5 0.13 4.3E-06 36.6 23.6 142 24-176 159-317 (400)
301 3v9f_A Two-component system se 96.5 0.2 7E-06 38.7 18.1 160 4-177 427-609 (781)
302 3kya_A Putative phosphatase; s 96.5 0.062 2.1E-06 39.4 11.1 113 55-178 140-277 (496)
303 1xi4_A Clathrin heavy chain; a 96.5 0.11 3.9E-06 43.0 13.1 175 3-179 85-289 (1630)
304 3amr_A 3-phytase; beta-propell 96.3 0.15 5.2E-06 35.6 15.2 111 54-177 68-208 (355)
305 2ism_A Putative oxidoreductase 96.3 0.077 2.6E-06 37.0 10.3 104 54-166 31-152 (352)
306 3sov_A LRP-6, low-density lipo 96.2 0.18 6E-06 34.7 22.4 140 25-177 80-236 (318)
307 3m0c_C LDL receptor, low-densi 95.9 0.43 1.5E-05 37.2 22.4 105 24-128 471-592 (791)
308 3sre_A PON1, serum paraoxonase 95.8 0.3 1E-05 34.3 17.3 153 2-167 81-285 (355)
309 3sbq_A Nitrous-oxide reductase 95.8 0.044 1.5E-06 40.8 7.4 81 97-178 325-407 (638)
310 2xbg_A YCF48-like protein; pho 95.6 0.32 1.1E-05 33.4 18.6 137 24-173 122-273 (327)
311 3das_A Putative oxidoreductase 95.5 0.35 1.2E-05 33.8 10.7 108 52-167 30-158 (347)
312 1xi4_A Clathrin heavy chain; a 95.5 0.81 2.8E-05 38.3 13.8 133 3-135 124-299 (1630)
313 1k3i_A Galactose oxidase precu 95.4 0.1 3.5E-06 39.6 8.6 84 75-168 433-530 (656)
314 1cru_A Protein (soluble quinop 95.2 0.61 2.1E-05 33.8 12.2 105 55-168 28-163 (454)
315 2xn4_A Kelch-like protein 2; s 95.0 0.49 1.7E-05 31.9 15.0 91 74-178 173-275 (302)
316 2vpj_A Kelch-like protein 12; 95.0 0.49 1.7E-05 31.8 15.1 102 65-178 161-277 (301)
317 2be1_A Serine/threonine-protei 94.9 0.035 1.2E-06 38.6 4.5 65 65-129 11-80 (339)
318 3sre_A PON1, serum paraoxonase 94.9 0.64 2.2E-05 32.6 12.9 91 73-178 138-251 (355)
319 4gq2_M Nucleoporin NUP120; bet 94.3 1.6 5.5E-05 34.9 13.5 39 96-134 237-275 (950)
320 3a9g_A Putative uncharacterize 94.1 0.66 2.2E-05 32.4 9.4 74 94-177 28-112 (354)
321 2ism_A Putative oxidoreductase 94.1 0.64 2.2E-05 32.4 9.3 74 94-177 30-112 (352)
322 4a0p_A LRP6, LRP-6, low-densit 94.0 1.5 5.1E-05 33.3 22.5 138 24-176 80-234 (628)
323 2be1_A Serine/threonine-protei 93.8 0.28 9.5E-06 34.2 6.9 62 65-127 112-185 (339)
324 3s94_A LRP-6, low-density lipo 93.8 1.7 5.7E-05 33.0 22.1 142 24-177 349-508 (619)
325 3das_A Putative oxidoreductase 93.6 1.3 4.4E-05 31.0 10.3 71 89-165 26-99 (347)
326 2g8s_A Glucose/sorbosone dehyd 93.5 1.2 4.2E-05 31.0 9.9 70 55-125 19-107 (353)
327 2xn4_A Kelch-like protein 2; s 93.3 1.2 4.1E-05 29.9 14.3 100 65-178 110-228 (302)
328 1zgk_A Kelch-like ECH-associat 93.2 1.3 4.4E-05 29.9 15.2 100 65-178 170-286 (308)
329 3ii7_A Kelch-like protein 7; p 93.2 1.3 4.4E-05 29.8 15.4 93 74-178 169-271 (306)
330 1cru_A Protein (soluble quinop 93.0 1.8 6.1E-05 31.4 10.4 70 94-167 26-98 (454)
331 3ii7_A Kelch-like protein 7; p 92.7 1.5 5.2E-05 29.5 14.5 64 65-128 103-181 (306)
332 4asc_A Kelch repeat and BTB do 92.2 1.8 6.2E-05 29.3 14.3 64 65-128 150-224 (315)
333 2xzh_A Clathrin heavy chain 1; 92.1 2.1 7.3E-05 29.9 9.7 73 58-130 264-337 (365)
334 2vpj_A Kelch-like protein 12; 92.1 1.8 6.2E-05 29.0 16.5 100 65-178 114-230 (301)
335 3ei3_A DNA damage-binding prot 91.9 4.5 0.00016 33.2 15.8 111 55-177 515-634 (1158)
336 2wg3_C Hedgehog-interacting pr 91.8 2.8 9.5E-05 30.6 11.3 51 55-105 15-79 (463)
337 1zgk_A Kelch-like ECH-associat 91.7 2.1 7.1E-05 28.9 14.5 100 65-178 123-239 (308)
338 2g8s_A Glucose/sorbosone dehyd 91.7 1.8 6E-05 30.2 8.7 66 95-166 18-86 (353)
339 4asc_A Kelch repeat and BTB do 91.0 2.5 8.6E-05 28.6 10.9 93 74-178 117-220 (315)
340 4gq2_M Nucleoporin NUP120; bet 89.5 0.65 2.2E-05 37.1 5.4 37 55-91 237-274 (950)
341 3zwu_A Alkaline phosphatase PH 88.1 2.8 9.5E-05 31.7 7.6 59 97-166 478-548 (592)
342 2woz_A Kelch repeat and BTB do 87.4 5 0.00017 27.1 9.6 54 75-128 128-187 (318)
343 2zwa_A Leucine carboxyl methyl 87.2 7.7 0.00026 29.9 9.9 107 65-179 453-577 (695)
344 2woz_A Kelch repeat and BTB do 86.9 5.5 0.00019 26.9 12.5 53 74-128 175-234 (318)
345 4a9v_A PHOX; hydrolase, beta-p 85.5 6.4 0.00022 29.7 8.2 62 95-167 476-549 (592)
346 4fhn_B Nucleoporin NUP120; pro 84.7 0.94 3.2E-05 36.9 4.0 36 56-91 240-276 (1139)
347 4fhn_B Nucleoporin NUP120; pro 82.7 1.1 3.7E-05 36.6 3.6 38 97-134 240-277 (1139)
348 2zwa_A Leucine carboxyl methyl 82.5 15 0.00051 28.3 14.6 63 65-127 502-579 (695)
349 2uvk_A YJHT; unknown function, 79.4 13 0.00043 25.6 10.8 64 65-128 21-98 (357)
350 2uvk_A YJHT; unknown function, 78.9 13 0.00045 25.5 8.8 49 74-123 168-224 (357)
351 3s25_A Hypothetical 7-bladed b 78.8 13 0.00044 25.3 9.2 65 59-128 109-179 (302)
352 3f7f_A Nucleoporin NUP120; nuc 78.6 4.3 0.00015 31.4 5.3 29 64-92 231-259 (729)
353 3ott_A Two-component system se 78.5 21 0.00072 27.6 13.3 106 55-177 147-258 (758)
354 2wg3_C Hedgehog-interacting pr 77.9 12 0.00042 27.3 7.4 30 95-124 14-44 (463)
355 3f7f_A Nucleoporin NUP120; nuc 77.9 3 0.0001 32.3 4.3 32 103-134 228-259 (729)
356 3s25_A Hypothetical 7-bladed b 77.8 14 0.00047 25.1 14.6 64 60-127 151-218 (302)
357 4a9v_A PHOX; hydrolase, beta-p 70.3 33 0.0011 26.0 8.1 57 56-112 478-548 (592)
358 3uc1_A DNA gyrase subunit A; D 69.3 25 0.00086 24.3 16.9 108 65-177 110-226 (327)
359 3sbq_A Nitrous-oxide reductase 68.9 36 0.0012 25.9 14.5 68 57-125 326-408 (638)
360 1q47_A Semaphorin 3A; beta pro 67.4 35 0.0012 25.2 9.1 27 148-174 461-487 (495)
361 3zwu_A Alkaline phosphatase PH 65.6 39 0.0013 25.6 7.8 56 57-112 479-548 (592)
362 3al9_A Plexin-A2; beta-propell 65.6 26 0.00089 26.2 6.8 67 54-120 400-476 (539)
363 4gz8_A Semaphorin-3A; multi-do 63.8 49 0.0017 25.6 8.9 27 148-174 469-495 (667)
364 3al9_A Plexin-A2; beta-propell 63.1 20 0.0007 26.7 5.9 68 97-174 402-476 (539)
365 3no0_A DNA gyrase subunit A; D 56.9 41 0.0014 22.5 11.6 110 55-177 25-144 (276)
366 1q47_A Semaphorin 3A; beta pro 50.0 75 0.0026 23.5 7.6 66 55-120 405-487 (495)
367 1suu_A DNA gyrase subunit A; t 48.9 61 0.0021 22.1 20.6 102 65-178 115-230 (312)
368 3nvq_A Semaphorin-7A; beta-pro 45.0 1E+02 0.0034 23.5 7.1 55 66-120 382-444 (590)
369 3ol2_B Plexin-B1; beta-propell 44.6 93 0.0032 23.3 6.7 67 54-120 387-461 (528)
370 3qhy_B Beta-lactamase inhibito 43.7 70 0.0024 21.3 12.7 67 54-125 141-207 (282)
371 3nvq_A Semaphorin-7A; beta-pro 42.9 78 0.0027 24.1 6.1 27 148-174 418-444 (590)
372 3no0_A DNA gyrase subunit A; D 41.9 76 0.0026 21.2 14.2 119 54-177 68-194 (276)
373 3oky_A Plexin-A2; transmembran 41.4 98 0.0033 24.1 6.6 66 55-120 400-475 (681)
374 4gz8_A Semaphorin-3A; multi-do 40.6 1E+02 0.0036 23.9 6.6 55 66-120 431-495 (667)
375 3qhy_B Beta-lactamase inhibito 40.1 81 0.0028 21.0 13.8 67 54-125 63-129 (282)
376 3ott_A Two-component system se 34.9 1.6E+02 0.0054 22.8 19.7 138 24-170 146-299 (758)
377 1olz_A Semaphorin 4D; developm 31.7 1.5E+02 0.005 23.0 6.2 57 108-174 417-477 (663)
378 3ol2_B Plexin-B1; beta-propell 30.9 1.7E+02 0.0058 22.0 7.3 68 96-174 388-461 (528)
379 1zi0_A DNA gyrase subunit A; b 23.7 1.8E+02 0.006 19.8 18.6 108 65-177 110-224 (307)
380 3oky_A Plexin-A2; transmembran 23.3 1.2E+02 0.0043 23.5 4.5 57 108-174 414-475 (681)
381 3kci_A Probable E3 ubiquitin-p 23.2 2E+02 0.0067 20.1 15.3 119 56-176 107-238 (389)
382 3mez_B Mannose-specific lectin 22.0 1.1E+02 0.0039 17.0 6.2 15 162-176 91-105 (113)
383 3mwp_A Nucleoprotein; structur 21.5 28 0.00094 25.3 0.7 19 111-129 162-180 (577)
384 1olz_A Semaphorin 4D; developm 20.8 3E+02 0.01 21.4 8.9 66 55-120 398-477 (663)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.8e-35 Score=204.48 Aligned_cols=167 Identities=11% Similarity=0.138 Sum_probs=140.7
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee----eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC----VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~i~~~~~~~~-~~ 66 (179)
+.|++|+|||+++++++..+.|...|.+++|+|+|..+++++ ..++.+ ...|...|.+++|+|+ ..
T Consensus 154 ~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~ 233 (365)
T 4h5i_A 154 KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV 233 (365)
T ss_dssp CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE
T ss_pred CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE
Confidence 368999999999999999999999999999999996555544 223332 4568889999999999 88
Q ss_pred EEEecCCC----cEEEEecCCCcc----eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 67 LASASTDS----TLRLWDVKENLP----VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 67 l~~~~~d~----~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+++++.|+ .+++|++..... ...+..|...|.+++|+|+|++|++|+.|+.|+|||+++++++..+. .
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~-~--- 309 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK-Q--- 309 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-T---
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-C---
Confidence 88888777 688899876543 34567788999999999999999999999999999999998776542 1
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
. |...|++++|+|||++|++++.|++|+|||+.
T Consensus 310 ------g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 310 ------A-HSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp ------S-SSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred ------c-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 1 27889999999999999999999999999985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=196.39 Aligned_cols=166 Identities=16% Similarity=0.209 Sum_probs=147.2
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.||.|++||+++++....+. +...|.+++|+|++..+++++ .+++.+ +.+|..+|.+++|+|+ .+
T Consensus 141 ~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 141 THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCE
T ss_pred cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCE
Confidence 468999999999998887775 677899999999996555554 344555 7889999999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+.. +
T Consensus 221 l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--h--------- 289 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD--H--------- 289 (321)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--C---------
T ss_pred EEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC--C---------
Confidence 99999999999999999999999999999999999999999999999999999999999887765431 1
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...|.+++|+|++++|++++.||.|++||+.
T Consensus 290 -~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 290 -QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp -SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred -CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 6789999999999999999999999999974
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=197.99 Aligned_cols=167 Identities=14% Similarity=0.255 Sum_probs=146.1
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.|++|++||+.+++++..+. +...+.+++|+|+++.+++++ ..++.. +..|...|.+++|+|+ .+
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 469999999999999988886 677899999999996555554 233333 6778889999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
|++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+. . |
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~---------h 247 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS--G---------H 247 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC--C---------C
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc--C---------C
Confidence 9999999999999999999999999999999999999999999999999999999999887665433 1 2
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.+++|+|++++|++++.|+.|++||+++
T Consensus 248 -~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 248 -ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp -SSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred -CCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 67899999999999999999999999999863
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=198.52 Aligned_cols=166 Identities=15% Similarity=0.166 Sum_probs=137.3
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CCCcee----eecccCceeEEEEeeC
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-----------QSTAPC----VHGHKKAVSYVKFLSN 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~i~~~~~~~~ 64 (179)
+.|++|++||+.+++++..+. |...|.+++|+|++..+++++ +.++++ ...|...+.+++|+|+
T Consensus 146 s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 146 SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS
T ss_pred eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCC
Confidence 479999999999999999886 899999999999987766655 333333 3445667899999997
Q ss_pred --CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCC-CEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 --DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS-EYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 --~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
.++++|+.|+.|++||+++++++..+.+|...|.+++|+|++ ++|++|+.|+.|++||+++++... ...
T Consensus 226 ~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~---~~~----- 297 (344)
T 4gqb_B 226 QSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR---SQA----- 297 (344)
T ss_dssp CTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE---ECC-----
T ss_pred CCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE---EcC-----
Confidence 678899999999999999999999999999999999999997 578999999999999999887543 222
Q ss_pred CcccCCcceEEEEEEccCCC-eEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSP-TMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 179 (179)
|...|++++|+|+++ +|++++.|++|++|++.+
T Consensus 298 -----H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 298 -----HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -----CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -----CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 277899999999886 567899999999999853
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=198.24 Aligned_cols=167 Identities=15% Similarity=0.202 Sum_probs=137.5
Q ss_pred CCCccEEEEEcCCceeEEee-----cCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEASVLNI-----DMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~ 63 (179)
+.||+|+|||+.+++.+... .|.+.|++++|+|+++.+++++ .+++++ +.+|...|.+++|+|
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASP 179 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecC
Confidence 47999999999988754432 4889999999999996666555 445555 889999999999999
Q ss_pred C--CeEEEecCCCcEEEEecCCCcceeeec--CCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 64 N--DELASASTDSTLRLWDVKENLPVRTFR--GHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 64 ~--~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+ ..|++++.|+.|++||++++++...+. .+...+.+++|+|+ ++++++|+.|+.|++||+++++++..+..
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~---- 255 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV---- 255 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC----
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC----
Confidence 8 578999999999999999998887765 34557899999995 66889999999999999999888766542
Q ss_pred CCCCcccCCcceEEEEEEccCC-CeEEEEeCCCcEEEEeecC
Q 038439 139 MDDTDEDAGSYFISAVCWKSDS-PTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 179 (179)
|...|++++|+|++ ++|++|+.|++|+|||+++
T Consensus 256 --------h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 256 --------HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp --------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred --------CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 27789999999998 5789999999999999763
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.6e-33 Score=193.20 Aligned_cols=167 Identities=19% Similarity=0.311 Sum_probs=145.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCC----cee--eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QST----APC--VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~----~~~--~~~~~~~i~~~~~~~ 63 (179)
|.||+|+|||..+++.+..+. |...|.+++|+|++..+++++ ... +.. +.+|...|.++.|++
T Consensus 74 s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 74 SQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred eCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 479999999999999888876 788899999999996555555 111 122 778999999999999
Q ss_pred CCeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCc
Q 038439 64 NDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTD 143 (179)
Q Consensus 64 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 143 (179)
++.+++++.|+.|++||+++++.+..+.+|...|.+++|+|+++++++|+.|+.|++||+++++....+..
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~--------- 224 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG--------- 224 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC---------
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC---------
Confidence 98899999999999999999999999999999999999999999999999999999999999877655431
Q ss_pred ccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 144 EDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|...|.+++|+|++++|++++.||.|++||+++
T Consensus 225 ---h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 225 ---HESDINAICFFPNGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ---CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 167899999999999999999999999999863
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-33 Score=197.18 Aligned_cols=165 Identities=19% Similarity=0.241 Sum_probs=142.0
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CCCcee----eecccCceeEEEEeeC
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-----------QSTAPC----VHGHKKAVSYVKFLSN 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~i~~~~~~~~ 64 (179)
+.|++|++||+++++++..+. |...|++++|+|++..+++++ +.++++ ...|...+.+++|+|+
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 468999999999999998886 889999999999986555554 233333 3456778999999998
Q ss_pred --CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCC-CEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 --DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS-EYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 --~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
.+|++++.|+.|++||+++++++..+..|...|.+++|+|++ ++|++|+.|+.|++||+++++.+....
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~-------- 309 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS-------- 309 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC--------
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC--------
Confidence 678899999999999999999999999999999999999987 578999999999999999987764432
Q ss_pred CcccCCcceEEEEEEcc-CCCeEEEEeCCCcEEEEeec
Q 038439 142 TDEDAGSYFISAVCWKS-DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~ 178 (179)
|...|++++|+| ++++|++++.||+|++|++.
T Consensus 310 -----H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 310 -----HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp -----CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred -----CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 277899999998 79999999999999999985
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-32 Score=190.45 Aligned_cols=179 Identities=16% Similarity=0.244 Sum_probs=145.7
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeC---------CCcee--eecccCceeEEEEeeC----
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQ---------STAPC--VHGHKKAVSYVKFLSN---- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~i~~~~~~~~---- 64 (179)
|.|++|+|||+.+++.+..+. |...|.+++|+|++..+++++. .++.+ +.+|...|.++.++|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC----
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCC
Confidence 469999999999999888875 8899999999999966655552 22333 7789999999999985
Q ss_pred ---CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCC----
Q 038439 65 ---DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSP---- 137 (179)
Q Consensus 65 ---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~---- 137 (179)
..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.....
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 243 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSL 243 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEE
Confidence 3799999999999999999988889999999999999999999999999999999999998776544332111
Q ss_pred ----C----------------------------CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 138 ----D----------------------------MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 138 ----~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. ........+...+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 244 ~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 244 AFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 0 00000112245688999999999999999999999999864
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-32 Score=189.37 Aligned_cols=168 Identities=21% Similarity=0.260 Sum_probs=142.8
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.||+|+|||+.+++.+..+. |..+|.+++|+|+++.+++++ .+++.+ +.+|...|.+++|+|+ .+
T Consensus 32 ~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 32 LYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred cCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 469999999999999888886 788999999999996666655 445555 8899999999999999 99
Q ss_pred EEEecCCCcEEEEecCCC-cceeeecCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 67 LASASTDSTLRLWDVKEN-LPVRTFRGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
+++++.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|+.|++||++++.+......
T Consensus 112 l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~---------- 181 (304)
T 2ynn_A 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT---------- 181 (304)
T ss_dssp EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC----------
T ss_pred EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc----------
Confidence 999999999999999876 44567888999999999999 678999999999999999988766544332
Q ss_pred cCCcceEEEEEEcc--CCCeEEEEeCCCcEEEEeecC
Q 038439 145 DAGSYFISAVCWKS--DSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 145 ~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~ 179 (179)
++...+..+.|+| ++++|++++.|+.|++||+++
T Consensus 182 -~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 182 -GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp -CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred -CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 1145788888886 778999999999999999863
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-32 Score=191.55 Aligned_cols=164 Identities=13% Similarity=0.216 Sum_probs=141.6
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.|++|++||+.+++++..+. |...|.+++|+|++..+++++ +.++++ +.+|...|.+++|+|+ ..
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 468999999999999988886 888999999999996555554 334444 7889999999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecC--CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRG--HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
|++++.|+.|++||+++++.+..+.. +...+.+++|+|+++++++|+.|+.|++||+.+++.+..+.
T Consensus 241 l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~----------- 309 (340)
T 1got_B 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA----------- 309 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-----------
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee-----------
Confidence 99999999999999998887776653 23479999999999999999999999999999887765543
Q ss_pred cCCcceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
.| ...|.+++|+|++.+|++|+.|+.|++||
T Consensus 310 ~h-~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 310 GH-DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CC-SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cC-CCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 12 77899999999999999999999999997
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-32 Score=196.11 Aligned_cols=167 Identities=22% Similarity=0.341 Sum_probs=147.1
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
|.||+|+|||+.+++....+. |...|.+++|+|++..+++++ ...+++ +.+|...|.+++|+|+ .+
T Consensus 127 s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred eCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 479999999999999888886 889999999999996555555 334444 7889999999999999 89
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
+++++.|+.|++||+++++++..+.+|...+.++.++|++.++++|+.|+.|++||+++++....+.. +
T Consensus 207 l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~--h--------- 275 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE--H--------- 275 (410)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--C---------
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC--C---------
Confidence 99999999999999999999999999999999999999999999999999999999998877655431 1
Q ss_pred CcceEEEEEEccC--------------------CCeEEEEeCCCcEEEEeecC
Q 038439 147 GSYFISAVCWKSD--------------------SPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 147 ~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 276 -~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 276 -RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp -SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred -CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 678999999996 67899999999999999863
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-32 Score=187.71 Aligned_cols=167 Identities=17% Similarity=0.278 Sum_probs=141.3
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCC-cee--eecccCceeEEEEeeC--
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QST-APC--VHGHKKAVSYVKFLSN-- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~-~~~--~~~~~~~i~~~~~~~~-- 64 (179)
+.|++|++||+.+++++..+. |...|.+++|+|+++.+++++ ..+ ... +.+|...|.+++|+|.
T Consensus 74 s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 74 SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153 (304)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCT
T ss_pred CCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCC
Confidence 479999999999999988886 889999999999996666555 222 222 7789999999999994
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeec-CCCCCeEEEEEee--CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFR-GHMNEKNFVGLTV--NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
..|++++.|+.|++||+++......+. .+...+..+.|+| ++.++++|+.|+.|++||+++++++..+..
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~------- 226 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG------- 226 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC-------
T ss_pred CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC-------
Confidence 789999999999999998877665554 4557889999987 678999999999999999999887765542
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
| ...|..++|+|++++|++++.||.|++||+++
T Consensus 227 ----h-~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 227 ----H-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp ----C-SSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ----C-CCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 2 67899999999999999999999999999763
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=191.86 Aligned_cols=167 Identities=16% Similarity=0.286 Sum_probs=139.2
Q ss_pred CCCccEEEEEcCCceeEE--ee--cCCCceeEEEEcCCCCeEEEEe----------CCC--cee--eecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQEASVL--NI--DMKANICCVKYNPGSSNYIAKY----------QST--APC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~--~~--~~~~~v~~~~~~~~~~~~~~~~----------~~~--~~~--~~~~~~~i~~~~~~ 62 (179)
|.|++|+|||+.+++... .+ .|...|.+++|+|++..+++++ ..+ +.+ +.+|...|.+++|+
T Consensus 35 ~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 35 GGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEEC
T ss_pred cCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEe
Confidence 479999999998876432 22 4888999999999996666555 222 223 78899999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCc---ceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENL---PVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
|+ .+|++++.|+.|++||++++. .+..+..|...|.+++|+|++++|++++.|+.|++||.++++......+..+
T Consensus 115 p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h- 193 (345)
T 3fm0_A 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH- 193 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-
T ss_pred CCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-
Confidence 99 999999999999999998753 3566778999999999999999999999999999999988764433334322
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...|++++|+|++++|++++.|++|++||+
T Consensus 194 ---------~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 194 ---------ESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp ---------SSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ---------CCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 778999999999999999999999999986
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7e-32 Score=185.77 Aligned_cols=168 Identities=19% Similarity=0.228 Sum_probs=147.5
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.||.|++|+..+++....+. |...|.+++|+|+++.+++++ ..++.+ +.+|...|.++.|+|+ .+
T Consensus 42 ~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 42 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred eCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 468999999999998888775 888999999999996666665 344445 7889999999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
+++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++++.|+.|++||+++++.+..+...
T Consensus 122 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------- 190 (312)
T 4ery_A 122 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD----------- 190 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-----------
T ss_pred EEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-----------
Confidence 999999999999999999999999999999999999999999999999999999999988776544321
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+...+..++|+|++++|++++.|+.|++||+++
T Consensus 191 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 191 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 155789999999999999999999999999863
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-32 Score=194.47 Aligned_cols=167 Identities=17% Similarity=0.240 Sum_probs=148.0
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
|.|++|+|||+.+++++..+. |...|.+++|+|++..+++++ ..+.++ +.+|...|.++.++|+ .+
T Consensus 169 s~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248 (410)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred eCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCE
Confidence 479999999999999888885 888999999999997666665 445555 7889999999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeC--------------------CCEEEEeccCCcEEEEEcCCC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVN--------------------SEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~~~~~~~d~~v~vwd~~~~ 126 (179)
+++++.|+.|++||+++++....+..|...|.+++|+|+ +.++++|+.|+.|++||++++
T Consensus 249 l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 249 IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT
T ss_pred EEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999999999999999999999999999999996 678999999999999999998
Q ss_pred ccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++..+.. | ...|.+++|+|++++|++++.||.|++||+++
T Consensus 329 ~~~~~~~~-----------h-~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 329 MCLMTLVG-----------H-DNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEEEEEC-----------C-SSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred ceEEEEEC-----------C-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 87765431 2 67899999999999999999999999999853
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-32 Score=189.51 Aligned_cols=166 Identities=18% Similarity=0.231 Sum_probs=143.8
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeCCC----------------cee--eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQST----------------APC--VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~----------------~~~--~~~~~~~i~~~~~ 61 (179)
|.||+|+|||..+++....+. +...|.+++|+|++..+++.+..+ ... +.+|...|.++.|
T Consensus 83 s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 83 SQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred eCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 479999999999988877775 677899999999996555555111 111 6679999999999
Q ss_pred eeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEee--CCCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 62 LSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTV--NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 62 ~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+|+ ..+++++.|++|++||+++++.+..+.+|...|.+++|+| ++.+|++|+.|+.|++||+++++++..+..
T Consensus 163 ~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~---- 238 (354)
T 2pbi_B 163 TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET---- 238 (354)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC----
T ss_pred eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC----
Confidence 999 8999999999999999999999999999999999999988 478999999999999999999887665432
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
|...|.+++|+|++++|++++.|++|++||++
T Consensus 239 --------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 239 --------HESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp --------CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred --------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 26789999999999999999999999999986
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.5e-32 Score=201.40 Aligned_cols=174 Identities=18% Similarity=0.225 Sum_probs=144.0
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCCCCeEEEEeC------------CCcee--eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPGSSNYIAKYQ------------STAPC--VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~i~~~~~~~ 63 (179)
+.||+|+|||+.+++ ....+. |.++|.+++|+|+++.+++++. .++.+ +.+|...|.+++|+|
T Consensus 78 ~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p 157 (611)
T 1nr0_A 78 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP 157 (611)
T ss_dssp ETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECS
T ss_pred eCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECC
Confidence 468999999987543 333443 8899999999999977777662 22233 678999999999999
Q ss_pred C-C-eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 64 N-D-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 64 ~-~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
+ . .|++++.|++|++||...++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.... .
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~----~ 233 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS----L 233 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT----S
T ss_pred CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc----c
Confidence 9 5 69999999999999999888889999999999999999999999999999999999999887765542110 0
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
....|...|.+++|+|++++|++++.|++|++||+++
T Consensus 234 -~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 234 -KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp -SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred -cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 0012377899999999999999999999999999863
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-31 Score=184.55 Aligned_cols=168 Identities=15% Similarity=0.178 Sum_probs=132.2
Q ss_pred CCCccEEEEEcCCc--eeEEee--c-CCCceeEEEEcCCCCeEEEEe--------CC---------Ccee--eecccCce
Q 038439 1 MAYGKVKVWCTRQE--ASVLNI--D-MKANICCVKYNPGSSNYIAKY--------QS---------TAPC--VHGHKKAV 56 (179)
Q Consensus 1 ~~d~~i~vwd~~~~--~~~~~~--~-~~~~v~~~~~~~~~~~~~~~~--------~~---------~~~~--~~~~~~~i 56 (179)
+.|++|++||+.++ +.+..+ . |...|.+++|+|++..+++++ +. .+++ +.+|...|
T Consensus 31 ~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V 110 (330)
T 2hes_X 31 STDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV 110 (330)
T ss_dssp ESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CE
T ss_pred cCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcE
Confidence 47999999999875 444555 2 888999999999996555554 11 1223 67899999
Q ss_pred eEEEEeeC-CeEEEecCCCcEEEEecCCC----cceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 57 SYVKFLSN-DELASASTDSTLRLWDVKEN----LPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 57 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
.+++|+|+ .+|++++.|+.|++||++.. +++..+..|...|.+++|+|++.+|++++.|+.|++||.+++.....
T Consensus 111 ~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 99999999 99999999999999999532 45677888999999999999999999999999999999887632222
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccC--CCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSD--SPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~ 178 (179)
..+..+ ...|.+++|+|+ +..|++++.|++|++||++
T Consensus 191 ~~~~~h----------~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 191 AVLNGH----------EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEECCC----------SSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred EEccCC----------CCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 223222 778999999998 6789999999999999974
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-31 Score=186.27 Aligned_cols=164 Identities=16% Similarity=0.292 Sum_probs=139.5
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCCcee--eecccCceeEEEEeeC-
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPG--SSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~- 64 (179)
+.|++|++||+++++++..+. |...|.+++|+|+ +..+++++ +.++++ +.+|...|.+++|+|+
T Consensus 173 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 173 SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG 252 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC
Confidence 468999999999999988886 8889999999885 43444444 445555 7889999999999999
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCC--CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGH--MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
..|++++.|++|++||++..+.+..+..+ ...+.+++|+|+++++++|+.|+.|++||+.+++.+..+. .
T Consensus 253 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~--~------ 324 (354)
T 2pbi_B 253 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF--G------ 324 (354)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC--C------
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE--C------
Confidence 99999999999999999988777666543 3468899999999999999999999999999887765432 1
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
|...|++++|+|++++|++|+.|+.|++|+
T Consensus 325 ----h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 325 ----HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ----CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ----CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 277899999999999999999999999996
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-31 Score=189.09 Aligned_cols=170 Identities=16% Similarity=0.272 Sum_probs=140.2
Q ss_pred CCCccEEEEEcCCceeEEee------cCCCceeEEEEcCCCCeEEEEe-----------C-CCcee--eecccCceeEEE
Q 038439 1 MAYGKVKVWCTRQEASVLNI------DMKANICCVKYNPGSSNYIAKY-----------Q-STAPC--VHGHKKAVSYVK 60 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~-----------~-~~~~~--~~~~~~~i~~~~ 60 (179)
|.|++|++||+.+++.+..+ .|...|.+++|+|....++++| + ..+++ +.+|...|.+++
T Consensus 177 s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 177 SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK 256 (380)
T ss_dssp CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE
T ss_pred CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE
Confidence 57999999999999988776 2678899999988433555555 1 22334 778999999999
Q ss_pred EeeC-CeEEEecCCCcEEEEecCCCcceeeecCCC-------CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccc
Q 038439 61 FLSN-DELASASTDSTLRLWDVKENLPVRTFRGHM-------NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWH 132 (179)
Q Consensus 61 ~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~ 132 (179)
|+|+ .+|++++.|++|++||+++++.+..+..+. ..+.+++|+|+|+++++|+.||.|++||+.+++.+..+
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 9999 999999999999999999998887775432 24889999999999999999999999999888766543
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.... ..|...|++++|+|++++|++|+.|+.|++|++.
T Consensus 337 ~~~~--------~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 337 GTLQ--------NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSC--------SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred eccc--------CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 2110 1227789999999999999999999999999985
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.7e-31 Score=181.96 Aligned_cols=179 Identities=13% Similarity=0.194 Sum_probs=139.9
Q ss_pred CCCccEEEEEcCCce-----eEEeec-CCCceeEEEEcCCCCeEEEEe--------------------------------
Q 038439 1 MAYGKVKVWCTRQEA-----SVLNID-MKANICCVKYNPGSSNYIAKY-------------------------------- 42 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~-----~~~~~~-~~~~v~~~~~~~~~~~~~~~~-------------------------------- 42 (179)
|.||+|+|||+.+.+ +...+. |...|.+++|+|++..+++++
T Consensus 58 s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (340)
T 4aow_A 58 SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 137 (340)
T ss_dssp ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEe
Confidence 579999999987643 344454 789999999999996666554
Q ss_pred --------------------CCCce-e--eecccCceeEEEEeeC---CeEEEecCCCcEEEEecCCCcceeeecCCCCC
Q 038439 43 --------------------QSTAP-C--VHGHKKAVSYVKFLSN---DELASASTDSTLRLWDVKENLPVRTFRGHMNE 96 (179)
Q Consensus 43 --------------------~~~~~-~--~~~~~~~i~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 96 (179)
..... . ..+|...+..++|+++ ..+++++.|+.|++||+++++.+..+.+|...
T Consensus 138 ~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~ 217 (340)
T 4aow_A 138 SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 217 (340)
T ss_dssp TTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred ecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence 00111 1 4567888999999887 56789999999999999999999999999999
Q ss_pred eEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCC-------------------------------------CC
Q 038439 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSP-------------------------------------DM 139 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~-------------------------------------~~ 139 (179)
|.+++|+|++++|++|+.|+.|++||+++.+++..+..... ..
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 297 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 297 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccc
Confidence 99999999999999999999999999998765544332111 00
Q ss_pred CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 140 DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.......|...|++++|+|++++|++|+.||.|+|||+++
T Consensus 298 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 298 ISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 0001112367899999999999999999999999999875
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.4e-31 Score=181.15 Aligned_cols=166 Identities=17% Similarity=0.177 Sum_probs=140.0
Q ss_pred CCCccEEEEEcCCc-----eeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQE-----ASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~-----~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~ 62 (179)
|.|++|++|++... .++..+. |...|.+++|+|++..+++++ .+++.+ +.+|...|.+++|+
T Consensus 37 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~ 116 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116 (319)
T ss_dssp ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEc
Confidence 47999999998642 3455554 889999999999997666665 445555 88999999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeC------CCEEEEeccCCcEEEEEcCCCccccccccC
Q 038439 63 SN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVN------SEYIACGSESNEVYVYHKEISKPVTWHRFS 135 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~ 135 (179)
|+ .++++++.|+.|++||++ ++.+..+.+|...+.++.|.|. +..+++++.|+.|++||+++.+....+.
T Consensus 117 ~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-- 193 (319)
T 3frx_A 117 KKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-- 193 (319)
T ss_dssp TTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec--
Confidence 99 999999999999999997 4567788899999999999985 4589999999999999999877654432
Q ss_pred CCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 136 SPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. |...|.+++|+|++++|++++.||.|++||+++
T Consensus 194 ---------~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 194 ---------G-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp ---------C-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ---------C-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 1 277899999999999999999999999999863
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.8e-31 Score=186.17 Aligned_cols=167 Identities=17% Similarity=0.227 Sum_probs=131.9
Q ss_pred CCCccEEEEEcCCceeEEe-----ecCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEASVLN-----IDMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~ 63 (179)
+.||+|+|||+.+++.... ..|...|++++|+|++..+++++ .+++.+ +.+|...|.+++|+|
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 4689999999988765432 24789999999999996666655 344555 788999999999999
Q ss_pred C--CeEEEecCCCcEEEEecCCCcceeeec--CCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 64 N--DELASASTDSTLRLWDVKENLPVRTFR--GHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 64 ~--~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+ ..+++++.|+.|++||++++++...+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+.. +
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~--~- 268 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV--H- 268 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--C-
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec--c-
Confidence 8 578999999999999999887766543 45677999999997 56789999999999999999887765432 1
Q ss_pred CCCCcccCCcceEEEEEEccCC-CeEEEEeCCCcEEEEeecC
Q 038439 139 MDDTDEDAGSYFISAVCWKSDS-PTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 179 (179)
...|++++|+|++ ++|++++.|++|+|||+++
T Consensus 269 ---------~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 269 ---------SQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp ---------SSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred ---------ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 6789999999987 5789999999999999863
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-30 Score=185.09 Aligned_cols=178 Identities=14% Similarity=0.231 Sum_probs=136.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEEee-C-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKFLS-N-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~~~-~-~~ 66 (179)
+.|++|+|||+.+++.+..+. |...|.+++|+|++..+++++ ..++.. ...+...+.+++|+| + .+
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKY 221 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCE
T ss_pred cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCE
Confidence 468999999999999888886 888999999999997766665 233333 334667899999999 5 89
Q ss_pred EEEecCCCcEEEEecCCCcceeee-------cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTF-------RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDM 139 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~ 139 (179)
+++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||+++..............
T Consensus 222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 999999999999999998877666 4688899999999999999999999999999998754322111100000
Q ss_pred -CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 140 -DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 140 -~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...... |...|.+++|+|++++|++|+.|+.|++||+++
T Consensus 302 ~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 302 CEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp EEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred ceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 001112 267899999999999999999999999999753
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-30 Score=177.11 Aligned_cols=170 Identities=12% Similarity=0.238 Sum_probs=133.8
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCC---cee-eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPG--SSNYIAKY----------QST---APC-VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~---~~~-~~~~~~~i~~~~~ 61 (179)
|.|++|+|||+.+++ .+..+. |...|.+++|+|+ +..+++++ +.. ... +.+|...|.+++|
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~ 153 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEE
T ss_pred cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEee
Confidence 479999999998874 444444 7889999999997 64555544 111 122 6789999999999
Q ss_pred eeC--------------CeEEEecCCCcEEEEecCCCc----ceeeecCCCCCeEEEEEeeCC---CEEEEeccCCcEEE
Q 038439 62 LSN--------------DELASASTDSTLRLWDVKENL----PVRTFRGHMNEKNFVGLTVNS---EYIACGSESNEVYV 120 (179)
Q Consensus 62 ~~~--------------~~l~~~~~d~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~d~~v~v 120 (179)
+|+ .+|++++.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|+.|++
T Consensus 154 ~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~i 233 (297)
T 2pm7_B 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCII 233 (297)
T ss_dssp CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEE
Confidence 985 489999999999999998765 556788999999999999984 88999999999999
Q ss_pred EEcCCCccccc-cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 121 YHKEISKPVTW-HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 121 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
||+++...... ..... .. +...|.+++|+|++++|++++.|+.|++|+.+
T Consensus 234 Wd~~~~~~~~~~~~~~~-------~~-~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 234 WTQDNEQGPWKKTLLKE-------EK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEESSTTSCCEEEESSS-------SC-CSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEeCCCCCccceeeeec-------cc-CCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99987532111 11100 01 16689999999999999999999999999975
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=2.8e-31 Score=187.52 Aligned_cols=167 Identities=19% Similarity=0.289 Sum_probs=139.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeCCC----------------c-ee--eecccCceeEEE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQST----------------A-PC--VHGHKKAVSYVK 60 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~----------------~-~~--~~~~~~~i~~~~ 60 (179)
|.||+|+|||+.+++....+. |...|.+++|+|++..+++++..+ . .. +.+|.+.|.++.
T Consensus 85 s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 85 SQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred eCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 479999999999999888886 788899999999996555554111 0 11 678999999999
Q ss_pred EeeC--CeEEEecCCCcEEEEecCCCcceeee-----cCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCC-ccccc
Q 038439 61 FLSN--DELASASTDSTLRLWDVKENLPVRTF-----RGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEIS-KPVTW 131 (179)
Q Consensus 61 ~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~-~~~~~ 131 (179)
|.|+ ..|++++.|++|++||+++++.+..+ .+|...+.+++|++ ++.+|++|+.|+.|++||++.. +.+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 9997 67999999999999999999888776 56888999999987 7899999999999999999853 44433
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+. . |...|.+++|+|++++|++++.||+|++||+++
T Consensus 245 ~~-----------~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 245 YH-----------G-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp EC-----------C-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred EC-----------C-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 22 1 277899999999999999999999999999863
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=1.1e-30 Score=186.10 Aligned_cols=168 Identities=16% Similarity=0.204 Sum_probs=140.5
Q ss_pred CCCccEEEEEcCCceeEEee-cCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNI-DMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+.||.|++||+.+++....+ .|...|.+++|+|++..+++++ ..++.+ +.+|...|.+++|+|+ .+
T Consensus 116 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 116 TTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp ETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 36899999999999988876 5899999999999997666555 334444 7889999999999999 99
Q ss_pred EEEecCCCcEEEEecCCCcceeeecC---CCCCeEE---------------------EEEeeCCCEEEEeccCCcEEEEE
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRG---HMNEKNF---------------------VGLTVNSEYIACGSESNEVYVYH 122 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~---------------------~~~~~~~~~~~~~~~d~~v~vwd 122 (179)
|++++.|+.|++||+++++.+..+.. +...+.+ ++|+|+++++++++.||.|++||
T Consensus 196 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 275 (420)
T 3vl1_A 196 VLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN 275 (420)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred EEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999988888764 3334444 44578899999999999999999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCC-eEEEEeCCCcEEEEeecC
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP-TMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 179 (179)
+++++....... .|...|.+++|+|+++ +|++++.||.|++||+++
T Consensus 276 ~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 276 VFSKEQTIQLPS-----------KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp TTTCCEEEEECC-----------TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCCceeEEccc-----------ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 999876655432 1267899999999998 999999999999999863
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.7e-29 Score=176.18 Aligned_cols=164 Identities=12% Similarity=0.143 Sum_probs=132.0
Q ss_pred CCCccEEEEEcCCc-------eeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEE
Q 038439 1 MAYGKVKVWCTRQE-------ASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVK 60 (179)
Q Consensus 1 ~~d~~i~vwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~ 60 (179)
|.|++|++||+.+. .+...+. |...|.+++|+|++..+++++ .+++.+ +.+|...|.+++
T Consensus 46 s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~ 125 (343)
T 2xzm_R 46 SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVA 125 (343)
T ss_dssp ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 46999999998753 3444554 889999999999996655555 445555 789999999999
Q ss_pred EeeC-CeEEEecCCCcEEEEecCCCcceeeec---CCCCCeEEEEEeeCC----------CEEEEeccCCcEEEEEcCCC
Q 038439 61 FLSN-DELASASTDSTLRLWDVKENLPVRTFR---GHMNEKNFVGLTVNS----------EYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 61 ~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~~~~~~~d~~v~vwd~~~~ 126 (179)
|+|+ .+|++++.|+.|++||+... ...... .|...+.+++|+|++ .++++++.|+.|++||.. .
T Consensus 126 ~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~ 203 (343)
T 2xzm_R 126 FSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-F 203 (343)
T ss_dssp ECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-T
T ss_pred ECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-C
Confidence 9999 99999999999999999843 333332 678889999999986 789999999999999943 3
Q ss_pred ccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+....+. . |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 204 ~~~~~~~--~----------h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 204 QIRYTFK--A----------HESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEEEE--C----------CSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred ceeEEEc--C----------ccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 3332222 1 26789999999999999999999999999983
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=4.8e-30 Score=189.34 Aligned_cols=161 Identities=21% Similarity=0.336 Sum_probs=137.0
Q ss_pred CCCccEEEEEcCCceeEEee-cCCCceeEEEEcCCCCeEEEEe---------CCCcee--eecccCceeEEEEeeC-CeE
Q 038439 1 MAYGKVKVWCTRQEASVLNI-DMKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~i~~~~~~~~-~~l 67 (179)
+.|+.|++||.. ++.+..+ .|...|++++|+|++..+++++ ..++.+ +.+|...|.+++|+|+ .+|
T Consensus 404 ~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 404 SDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp ETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred eCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 368999999954 5555555 4889999999999996665555 233344 7889999999999999 999
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++++.|+.|++||. +++++..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+. .|
T Consensus 483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~-----------~h- 548 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-----------GH- 548 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-----------CC-
T ss_pred EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc-----------CC-
Confidence 99999999999995 57888999999999999999999999999999999999996 455554433 22
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
...|++++|+||+++|++++.|+.|++||
T Consensus 549 ~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 77899999999999999999999999997
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1e-29 Score=180.21 Aligned_cols=165 Identities=22% Similarity=0.341 Sum_probs=137.6
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcC-CCCeEEEEe-----------CCCcee--e-------ecccCceeEE
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNP-GSSNYIAKY-----------QSTAPC--V-------HGHKKAVSYV 59 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~-----------~~~~~~--~-------~~~~~~i~~~ 59 (179)
+.|++|++||+.++++...+.+...+.+++|+| ++ .+++++ ..++.+ + .+|...|.++
T Consensus 184 s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 184 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC-CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred cCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 469999999999999998888899999999999 66 455554 223332 2 5789999999
Q ss_pred EEeeC-CeEEEecCCCcEEEEecCCC------------cceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCC
Q 038439 60 KFLSN-DELASASTDSTLRLWDVKEN------------LPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 60 ~~~~~-~~l~~~~~d~~v~iwd~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~ 126 (179)
+|+|+ .+|++++.|+.|++||++.. .+...+.+|...|.+++|+|++.+|++|+.|+.|++||++++
T Consensus 263 ~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 263 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999 89999999999999999753 344567789999999999999999999999999999999998
Q ss_pred ccccccccCCCCCCCCcccCCcceEEEEEEcc------CCCeEEEEeCCCcEEEEeec
Q 038439 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS------DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~dg~i~iwd~~ 178 (179)
+++..+.. | ...|.+++|++ ++++|++|+.||.|++|+++
T Consensus 343 ~~~~~l~~-----------h-~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 343 NPLLMLQG-----------H-RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp CEEEEEEC-----------C-SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred eEEEEECC-----------C-CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 87755431 2 67899999876 68899999999999999975
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=176.51 Aligned_cols=174 Identities=16% Similarity=0.199 Sum_probs=130.5
Q ss_pred CCCccEEEEEcCC-------ceeEEeec-CCCceeEEEEcCCCCeEEEEe--------C--C----Ccee--eecccCce
Q 038439 1 MAYGKVKVWCTRQ-------EASVLNID-MKANICCVKYNPGSSNYIAKY--------Q--S----TAPC--VHGHKKAV 56 (179)
Q Consensus 1 ~~d~~i~vwd~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~--------~--~----~~~~--~~~~~~~i 56 (179)
+.|++|+|||+.. .+++..+. |..+|.+++|+|++..+++++ + . .+++ +.+|...|
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 4699999999853 34455554 889999999999996665555 1 1 1233 77899999
Q ss_pred eEEEEeeC-CeEEEecCCCcEEEEecCCC--cceeeecCCCCCeEEEEEeeC--CCEEEEeccCCcEEEEEcCCCccccc
Q 038439 57 SYVKFLSN-DELASASTDSTLRLWDVKEN--LPVRTFRGHMNEKNFVGLTVN--SEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 57 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
.+++|+|+ .+|++++.|++|++||...+ +++..+.+|...|.+++|+|+ +.++++++.|+.|++||++.+.....
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 99999999 99999999999999998766 577888999999999999998 67899999999999999976532100
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..... .......|...|.+++|++++ +|++++.||.|++||+.
T Consensus 237 ~~~~~---~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 237 QEWVC---EAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEE---EEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEE
T ss_pred ceeEE---eeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcC
Confidence 00000 000011127789999999765 79999999999999974
No 32
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.2e-30 Score=183.61 Aligned_cols=177 Identities=12% Similarity=0.177 Sum_probs=134.8
Q ss_pred CCCccEEEEEcCCc--eeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCc---ee--eecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQE--ASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTA---PC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~--~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~---~~--~~~~~~~i~~~~~~ 62 (179)
+.|+.|+|||+.++ +.+..+. |...|.+++|+|++..+++++ ..++ +. +.+|...|.+++|+
T Consensus 30 ~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 30 TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWS 109 (377)
T ss_dssp CSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECC
T ss_pred cCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEEC
Confidence 47999999999988 6666665 889999999999996666665 2222 23 67899999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCc---ceeeecC-CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENL---PVRTFRG-HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSP 137 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~ 137 (179)
|+ ..|++++.|+.|++||++.++ ....+.. |...|.+++|+|++++|++++.|+.|++||++..+..........
T Consensus 110 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 110 PNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp TTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSS
T ss_pred CCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccccc
Confidence 99 999999999999999999876 4677777 899999999999999999999999999999975432111000000
Q ss_pred -------CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 138 -------DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 138 -------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...... .|...|.+++|+|++++|++++.||.|++||+++
T Consensus 190 ~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 190 GSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp CSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred ccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 000001 2377899999999999999999999999999863
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=4.6e-29 Score=173.97 Aligned_cols=163 Identities=16% Similarity=0.267 Sum_probs=132.5
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeCCCce---------e-----eecccCceeEEEEeeC-
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQSTAP---------C-----VHGHKKAVSYVKFLSN- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~---------~-----~~~~~~~i~~~~~~~~- 64 (179)
+.|++|++||+++++.+..+. |...|.+++|+|++..+++++..+.. . ..+|...|.+++|+|+
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 469999999999999888875 88999999999999777666622211 1 1268889999999987
Q ss_pred ----------CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc-cccccc
Q 038439 65 ----------DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK-PVTWHR 133 (179)
Q Consensus 65 ----------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~-~~~~~~ 133 (179)
.++++++.|+.|++||. ..+....+..|...|.+++|+|++++|++|+.|+.|++||++... +...+.
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 253 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD 253 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec
Confidence 37999999999999994 456677888999999999999999999999999999999995433 332222
Q ss_pred cCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 134 FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 134 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
. ...|.+++|+|++++++++ .|+.|++||+.
T Consensus 254 ~-------------~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~ 284 (343)
T 2xzm_R 254 A-------------GSTINQIAFNPKLQWVAVG-TDQGVKIFNLM 284 (343)
T ss_dssp C-------------SSCEEEEEECSSSCEEEEE-ESSCEEEEESS
T ss_pred C-------------CCcEEEEEECCCCCEEEEE-CCCCEEEEEeC
Confidence 1 4569999999999877655 57789999975
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=3e-29 Score=175.12 Aligned_cols=178 Identities=19% Similarity=0.212 Sum_probs=137.1
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCCCCeEEEEe----------CCC---cee--eecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPGSSNYIAKY----------QST---APC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~---~~~--~~~~~~~i~~~~~~ 62 (179)
+.|++|+|||..++. ++..+. |..+|.+++|+|++..+++++ ..+ +.+ +.+|...|.+++|+
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 469999999988764 455664 889999999999996666555 111 222 67899999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCc--ceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENL--PVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDM 139 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~ 139 (179)
|+ .+|++++.|+.|++||.+.++ +...+.+|...|.+++|+|++++|++++.|+.|++||.................
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 99 999999999999999998764 446788999999999999999999999999999999975433221111000000
Q ss_pred ----CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 140 ----DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 140 ----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.......|...|.+++|+|++..|++++.|+.|++|+.+
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred ccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 000112236789999999999999999999999999874
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=5.6e-29 Score=170.42 Aligned_cols=168 Identities=14% Similarity=0.141 Sum_probs=132.6
Q ss_pred CCCccEEEEEcCC--ceeEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCCc--ee--eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQ--EASVLNID-MKANICCVKYNPG--SSNYIAKY----------QSTA--PC--VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~--~~~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~~--~~--~~~~~~~i~~~~~ 61 (179)
+.|++|+|||+.+ .+++..+. |.++|.+++|+|+ +..+++++ ..++ .+ +.+|...|.+++|
T Consensus 28 s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~ 107 (297)
T 2pm7_B 28 SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQW 107 (297)
T ss_dssp ETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEE
T ss_pred eCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEe
Confidence 4799999999974 35666665 8899999999864 64444444 2221 22 6679999999999
Q ss_pred eeC---CeEEEecCCCcEEEEecCCCc--ceeeecCCCCCeEEEEEeeC-------------CCEEEEeccCCcEEEEEc
Q 038439 62 LSN---DELASASTDSTLRLWDVKENL--PVRTFRGHMNEKNFVGLTVN-------------SEYIACGSESNEVYVYHK 123 (179)
Q Consensus 62 ~~~---~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-------------~~~~~~~~~d~~v~vwd~ 123 (179)
+|+ .+|++++.|+.|++||+++.. ....+..|...|.+++|+|+ +++|++|+.|+.|++||+
T Consensus 108 ~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 108 APHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp CCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEE
T ss_pred CcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEE
Confidence 996 589999999999999998753 24566789999999999997 578999999999999999
Q ss_pred CCCcccc--ccccCCCCCCCCcccCCcceEEEEEEccCC---CeEEEEeCCCcEEEEeec
Q 038439 124 EISKPVT--WHRFSSPDMDDTDEDAGSYFISAVCWKSDS---PTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 124 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~ 178 (179)
++++... ...+.. |...|.+++|+|++ ++|++++.|++|++||++
T Consensus 188 ~~~~~~~~~~~~l~~----------H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 188 NSDAQTYVLESTLEG----------HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ETTTTEEEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cCCCceEEEEEEecC----------CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 8765321 112222 27789999999984 899999999999999985
No 36
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=5.1e-29 Score=185.51 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=137.8
Q ss_pred ccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-CeEE
Q 038439 4 GKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~l~ 68 (179)
++|++|| .++....+. |...|.+++|+|+++..++++ ...+.+ +.+|...|.+++|+|+ .+|+
T Consensus 129 ~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 129 GHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp EEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEE
Confidence 4677777 445555554 888999999999987655555 233344 7889999999999999 9999
Q ss_pred EecCCCcEEEEecCCCcceeeec-------CCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCC---
Q 038439 69 SASTDSTLRLWDVKENLPVRTFR-------GHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD--- 138 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~--- 138 (179)
+++.|++|++||+.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+......
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 99999999999999988887774 68999999999999999999999999999999988765544321000
Q ss_pred -----------------------------CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 139 -----------------------------MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 139 -----------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
......+ |...|++++|+|++++|++++.|+.|++||++
T Consensus 287 ~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 0001123 37789999999999999999999999999975
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.5e-29 Score=188.10 Aligned_cols=165 Identities=19% Similarity=0.289 Sum_probs=140.7
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeCCCc---------ee------eecccCceeEEEEeeC
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQSTA---------PC------VHGHKKAVSYVKFLSN 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~---------~~------~~~~~~~i~~~~~~~~ 64 (179)
|.||+|+|||+.+++.+..+. |...|.+++|+|++..+++++..+. .. ..+|...|.+++|+|+
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred eCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 469999999999999888875 8899999999999977777662211 11 2468889999999998
Q ss_pred ---CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 ---DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 ---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
..+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~------- 601 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA------- 601 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-------
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-------
Confidence 4799999999999999999999999999999999999999999999999999999999999887755432
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...+.+++|+|++.++++++ ++.|++||+++
T Consensus 602 ------~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~ 632 (694)
T 3dm0_A 602 ------NSVIHALCFSPNRYWLCAAT-EHGIKIWDLES 632 (694)
T ss_dssp ------SSCEEEEEECSSSSEEEEEE-TTEEEEEETTT
T ss_pred ------CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCC
Confidence 45799999999998877765 55699999863
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.3e-29 Score=181.83 Aligned_cols=168 Identities=14% Similarity=0.204 Sum_probs=131.7
Q ss_pred CCCccEEEEEcCCceeEEee---cCCCceeEEEEcCC-CCeEEEEeCCC---------cee--e---ecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQEASVLNI---DMKANICCVKYNPG-SSNYIAKYQST---------APC--V---HGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~---~~~~~v~~~~~~~~-~~~~~~~~~~~---------~~~--~---~~~~~~i~~~~~~ 62 (179)
+.||+|+|||+.+++....+ .|.+.|++++|+|. +..+++++..+ ..+ + ..+...+.+++|+
T Consensus 139 s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (435)
T 4e54_B 139 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVS 218 (435)
T ss_dssp ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEE
T ss_pred eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEEC
Confidence 47999999999876543333 48899999999984 54455554211 111 1 2234457889999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEcCCCccccccccCCCCCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE-YIACGSESNEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
|+ .+|++|+.|+.|++||++. +.+..+..|...|.+++|+|++. ++++|+.|+.|++||+++.+....+...
T Consensus 219 ~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~----- 292 (435)
T 4e54_B 219 ASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS----- 292 (435)
T ss_dssp TTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC-----
T ss_pred CCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEe-----
Confidence 99 9999999999999999874 56778889999999999999876 6789999999999999987654433211
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..|...|++++|+|++++|++++.||.|++||++
T Consensus 293 ----~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 293 ----LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp ----CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ----eeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 1127789999999999999999999999999985
No 39
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=8.4e-29 Score=174.69 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=135.1
Q ss_pred CCCccEEEEEcCCceeEEeec---CCCceeEEEEcCCCCeEEEEe-CC---------Ccee--e---ecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQEASVLNID---MKANICCVKYNPGSSNYIAKY-QS---------TAPC--V---HGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~-~~---------~~~~--~---~~~~~~i~~~~~~ 62 (179)
+.||+|+|||+.+++....+. |...|.+++|+|++..+++++ .. +..+ + ..|...|.+++|+
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 93 SKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp EBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEE
T ss_pred cCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEEC
Confidence 368999999999887776664 889999999999433455554 11 1222 3 3345789999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEcCCCc----cccccccCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE-YIACGSESNEVYVYHKEISK----PVTWHRFSS 136 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~~~~----~~~~~~~~~ 136 (179)
|+ .+|++++.|+.|++||+ +++.+..+..|...|.+++|+|+++ ++++++.|+.|++||+++.+ .+....
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--- 248 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--- 248 (383)
T ss_dssp TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE---
T ss_pred CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec---
Confidence 99 99999999999999999 4678888999999999999999998 89999999999999999843 332221
Q ss_pred CCCCCCcccCCcceEEEEEEcc-CCCeEEEEeCCCcEEEEeec
Q 038439 137 PDMDDTDEDAGSYFISAVCWKS-DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~ 178 (179)
|...|.+++|+| ++++|++++.|+.|++||++
T Consensus 249 ----------~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 249 ----------HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp ----------CSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred ----------CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 167899999999 99999999999999999985
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.6e-28 Score=169.00 Aligned_cols=152 Identities=24% Similarity=0.323 Sum_probs=131.9
Q ss_pred eEEee-cCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-CeEEEecCCCcEEEEec
Q 038439 16 SVLNI-DMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDV 81 (179)
Q Consensus 16 ~~~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~ 81 (179)
....+ .|..+|++++|+|+++.+++++ ..++.. +.+|...|.+++|+|+ ++|++++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 34444 3889999999999996666655 233333 7789999999999999 99999999999999999
Q ss_pred CCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCC
Q 038439 82 KENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP 161 (179)
Q Consensus 82 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 161 (179)
++++.+..+..|...|.+++|+|+++++++|+.|+.|++||+++++.+..+.. |...|.+++|+|+++
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~------------~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA------------HSDPVSAVHFNRDGS 162 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC------------CSSCEEEEEECTTSS
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC------------CCCcEEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999887655432 166899999999999
Q ss_pred eEEEEeCCCcEEEEeecC
Q 038439 162 TMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 162 ~l~~~~~dg~i~iwd~~~ 179 (179)
+|++++.||.|++||+++
T Consensus 163 ~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCcEEEEECCC
Confidence 999999999999999863
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=3e-29 Score=175.33 Aligned_cols=170 Identities=13% Similarity=0.228 Sum_probs=138.1
Q ss_pred CCCccEEEEEcCCceeEEee----cCCCceeEEEEcCCCCeEEEEeCCCcee------------e---------------
Q 038439 1 MAYGKVKVWCTRQEASVLNI----DMKANICCVKYNPGSSNYIAKYQSTAPC------------V--------------- 49 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~------------~--------------- 49 (179)
+.||+|++||+.+++.+..+ .|...|.+++|+|++..+++++..+... +
T Consensus 135 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 135 SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 36899999999999988887 4889999999999997666665221111 1
Q ss_pred -------------ecccCceeEEEEeeCCeEEEecCCCcEEEEecCCCcc--------------eeeecCCCCCeEEEEE
Q 038439 50 -------------HGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLP--------------VRTFRGHMNEKNFVGL 102 (179)
Q Consensus 50 -------------~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--------------~~~~~~~~~~v~~~~~ 102 (179)
..|...|.+++|+ ..++++++.|+.|++||+++.+. +..+..|...+.+++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 293 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC
T ss_pred cceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE
Confidence 1288999999998 57999999999999999987644 6677788889999999
Q ss_pred eeC--CCEEEEeccCCcEEEEEcCCCcccccc--ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 103 TVN--SEYIACGSESNEVYVYHKEISKPVTWH--RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 103 ~~~--~~~~~~~~~d~~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+|+ +++|++++.||.|++||++++++.... .+..+ .+...|.+++|+|++++|++++.||.|++||+.
T Consensus 294 s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH--------KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCT--------TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccc--------ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 999 999999999999999999998765411 12111 015789999999999999999999999999986
Q ss_pred C
Q 038439 179 A 179 (179)
Q Consensus 179 ~ 179 (179)
+
T Consensus 366 ~ 366 (366)
T 3k26_A 366 R 366 (366)
T ss_dssp -
T ss_pred C
Confidence 4
No 42
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.7e-29 Score=177.67 Aligned_cols=168 Identities=17% Similarity=0.175 Sum_probs=138.0
Q ss_pred CCCccEEEEEcCCcee----EEee-cCCCceeEEEEcC-CCCeEEEEe----------CCC-------cee--eecccCc
Q 038439 1 MAYGKVKVWCTRQEAS----VLNI-DMKANICCVKYNP-GSSNYIAKY----------QST-------APC--VHGHKKA 55 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~----~~~~-~~~~~v~~~~~~~-~~~~~~~~~----------~~~-------~~~--~~~~~~~ 55 (179)
+.||.|+||++.+... +..+ .|.++|++++|+| ++..+++++ ..+ +++ +.+|...
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~ 133 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR 133 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence 4689999999865432 2233 3889999999999 775444444 222 333 7889999
Q ss_pred eeEEEEeeC--CeEEEecCCCcEEEEecCCCcceeee--cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 56 VSYVKFLSN--DELASASTDSTLRLWDVKENLPVRTF--RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 56 i~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
|.+++|+|+ ..|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeee
Confidence 999999999 58999999999999999999999888 78999999999999999999999999999999999887765
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE---eCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA---NSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~dg~i~iwd~~ 178 (179)
+... |....+..+.|+|++++|++| +.|+.|++||++
T Consensus 214 ~~~~----------~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 214 KDRP----------HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp EECS----------SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred eccC----------CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 5211 113348889999999999999 789999999985
No 43
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.9e-29 Score=174.12 Aligned_cols=167 Identities=13% Similarity=0.180 Sum_probs=131.1
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCC--CCeEEEEe-CC----------C-ce--e--eecccCceeEE
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPG--SSNYIAKY-QS----------T-AP--C--VHGHKKAVSYV 59 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~~~-~~----------~-~~--~--~~~~~~~i~~~ 59 (179)
|.|++|++||+++++ ....+. |...|.+++|+|+ + .+++++ .. . .. . +.+|...|.++
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC
T ss_pred ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE
Confidence 469999999998874 444554 8889999999998 5 445554 11 1 11 1 56788899999
Q ss_pred EEeeC------------------CeEEEecCCCcEEEEecCCC---cceeeecCCCCCeEEEEEeeCC----CEEEEecc
Q 038439 60 KFLSN------------------DELASASTDSTLRLWDVKEN---LPVRTFRGHMNEKNFVGLTVNS----EYIACGSE 114 (179)
Q Consensus 60 ~~~~~------------------~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~ 114 (179)
.|+|+ .+|++++.|+.|++||++.. +++..+.+|...|.+++|+|++ .+|++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 99986 37999999999999999754 4567788999999999999986 78999999
Q ss_pred CCcEEEEEcCCCcc--ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 115 SNEVYVYHKEISKP--VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 115 d~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
|+.|++||+++... .....+. .| ...|++++|+|++++|++++.|+.|++|+..
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~---------~~-~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLH---------KF-NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEE---------EC-SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEccCccccchhhhhhh---------cC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999986321 0000111 11 6689999999999999999999999999974
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.4e-28 Score=170.27 Aligned_cols=163 Identities=17% Similarity=0.260 Sum_probs=140.5
Q ss_pred CccEEEEEcCCceeE---Eee---cCCCceeEEEEcCCCCeEEEEe----------CCCc--ee--eecccCceeEEEEe
Q 038439 3 YGKVKVWCTRQEASV---LNI---DMKANICCVKYNPGSSNYIAKY----------QSTA--PC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 3 d~~i~vwd~~~~~~~---~~~---~~~~~v~~~~~~~~~~~~~~~~----------~~~~--~~--~~~~~~~i~~~~~~ 62 (179)
||.|++||+.+++.. ..+ .+...|.+++|+|++..+++++ ..++ .. +..|...|.+++|+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 899999999876532 222 4788999999999996666655 2222 22 77888999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
|+ .++++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++++.|+.|++||+++++.+.....
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------- 223 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF------- 223 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-------
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-------
Confidence 99 8999999999999999999999999999999999999999999999999999999999999887766543
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...+.+++|+|+++++++++.++.|++||++
T Consensus 224 ------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 224 ------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp ------SSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ------CCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 5679999999999999999999999999986
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=172.27 Aligned_cols=171 Identities=12% Similarity=0.235 Sum_probs=137.5
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCC---cee-eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPG--SSNYIAKY----------QST---APC-VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~---~~~-~~~~~~~i~~~~~ 61 (179)
+.||.|++||+.+++ .+..+. |...|.+++|+|+ +..+++++ ... ... +..|...|.+++|
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 468999999999886 555554 8889999999999 75555555 112 122 6789999999999
Q ss_pred ee-------------C-CeEEEecCCCcEEEEecCCCc----ceeeecCCCCCeEEEEEeeC---CCEEEEeccCCcEEE
Q 038439 62 LS-------------N-DELASASTDSTLRLWDVKENL----PVRTFRGHMNEKNFVGLTVN---SEYIACGSESNEVYV 120 (179)
Q Consensus 62 ~~-------------~-~~l~~~~~d~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~v 120 (179)
+| + ..+++++.|+.|++||++.++ ....+..|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 99 6 899999999999999998764 34567789999999999999 899999999999999
Q ss_pred EEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 121 YHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 121 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
||+++++.......... ..+...|.+++|+|++++|++++.||.|++|+++
T Consensus 236 wd~~~~~~~~~~~~~~~-------~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKE-------EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSTTSCCEEEESSS-------SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EeCCCCCccceeeeecc-------ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99998753221111110 1126789999999999999999999999999985
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.3e-28 Score=185.56 Aligned_cols=167 Identities=18% Similarity=0.209 Sum_probs=136.4
Q ss_pred CCCccEEEEEcCCc-----eeEEee-cCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEe
Q 038439 1 MAYGKVKVWCTRQE-----ASVLNI-DMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFL 62 (179)
Q Consensus 1 ~~d~~i~vwd~~~~-----~~~~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~ 62 (179)
|.|++|+|||+.+. .....+ .|...|.+++|+|++..+++++ ..++.+ +.+|...|.+++|+
T Consensus 402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 481 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS 481 (694)
T ss_dssp ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEe
Confidence 47999999998753 233444 4889999999999996666655 334444 78999999999999
Q ss_pred eC-CeEEEecCCCcEEEEecCCCcceeee---cCCCCCeEEEEEeeCC--CEEEEeccCCcEEEEEcCCCccccccccCC
Q 038439 63 SN-DELASASTDSTLRLWDVKENLPVRTF---RGHMNEKNFVGLTVNS--EYIACGSESNEVYVYHKEISKPVTWHRFSS 136 (179)
Q Consensus 63 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~--~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~ 136 (179)
|+ ..|++++.|++|++||.......... ..|...|.+++|+|++ ..+++++.|+.|++||+++++....+.
T Consensus 482 ~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~--- 558 (694)
T 3dm0_A 482 LDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA--- 558 (694)
T ss_dssp TTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC---
T ss_pred CCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc---
Confidence 99 99999999999999998754332222 3578889999999986 579999999999999999887665432
Q ss_pred CCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. |...|++++|+|++++|++++.||.|++||+++
T Consensus 559 --------~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 559 --------G-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp --------C-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred --------C-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 1 277899999999999999999999999999863
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.3e-28 Score=169.44 Aligned_cols=178 Identities=15% Similarity=0.187 Sum_probs=132.3
Q ss_pred CCCccEEEEEcCCc----eeEEeec-CCCceeEEEEcC--CCCeEEEEe----------CCC---------cee--eecc
Q 038439 1 MAYGKVKVWCTRQE----ASVLNID-MKANICCVKYNP--GSSNYIAKY----------QST---------APC--VHGH 52 (179)
Q Consensus 1 ~~d~~i~vwd~~~~----~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~----------~~~---------~~~--~~~~ 52 (179)
+.||+|++||+.++ +....+. |..+|.+++|+| ++..+++++ ..+ +++ +..|
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T 3f3f_A 30 SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS 109 (351)
T ss_dssp ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc
Confidence 46899999999876 3445554 889999999999 475555555 222 233 7789
Q ss_pred cCceeEEEEeeC---CeEEEecCCCcEEEEecCCCcc-------------------------------------------
Q 038439 53 KKAVSYVKFLSN---DELASASTDSTLRLWDVKENLP------------------------------------------- 86 (179)
Q Consensus 53 ~~~i~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~------------------------------------------- 86 (179)
...|.+++|+|+ .++++++.|+.|++||+++++.
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~ 189 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA 189 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE
T ss_pred CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec
Confidence 999999999997 5799999999999999875431
Q ss_pred -----------------eeeecCCCCCeEEEEEeeCC----CEEEEeccCCcEEEEEcCCCccccccccCCC--------
Q 038439 87 -----------------VRTFRGHMNEKNFVGLTVNS----EYIACGSESNEVYVYHKEISKPVTWHRFSSP-------- 137 (179)
Q Consensus 87 -----------------~~~~~~~~~~v~~~~~~~~~----~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~-------- 137 (179)
+..+..|...|.+++|+|++ ++|++++.|+.|++||++++...........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 269 (351)
T 3f3f_A 190 LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNS 269 (351)
T ss_dssp TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------
T ss_pred CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCC
Confidence 34455688899999999998 8999999999999999987532211100000
Q ss_pred ---------------------------CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 138 ---------------------------DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 138 ---------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
........ |...|++++|+|++++|++++.||.|++||+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 270 ADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ---------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 00000112 377899999999999999999999999999863
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4.6e-28 Score=167.63 Aligned_cols=164 Identities=10% Similarity=0.122 Sum_probs=141.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEEeeC-CeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~~~~-~~l 67 (179)
+.||.|++||+.+++.+..+. |...|.+++|+|++..+++++ +.++.+ ...+...+.+++|+|+ ..+
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEE
Confidence 368999999999999888886 788999999999997666665 333444 4457788999999999 999
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++++.++.|++||+++++. ..+..|...+.+++|+|+++++++++.|+.|++||+++++.+.....
T Consensus 240 ~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------------- 305 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE------------- 305 (337)
T ss_dssp EEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-------------
T ss_pred EEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecC-------------
Confidence 9999999999999998764 46677899999999999999999999999999999999887644322
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...+.+++|+|++++|++++.||.|++|++.
T Consensus 306 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 306 SSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 6679999999999999999999999999974
No 49
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3.8e-28 Score=166.99 Aligned_cols=165 Identities=13% Similarity=0.174 Sum_probs=127.0
Q ss_pred CCccEEEEEcCCceeEEeec---CCCceeEEEEcCCCCeEEEEe------------------------------------
Q 038439 2 AYGKVKVWCTRQEASVLNID---MKANICCVKYNPGSSNYIAKY------------------------------------ 42 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~------------------------------------ 42 (179)
.|++|+|||+.+++++..+. |...|++++|+|+++.+++++
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l 122 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYIL 122 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEE
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEE
Confidence 48999999999999888774 667899999999996555554
Q ss_pred ---------------CCCcee--eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcce----eee----------
Q 038439 43 ---------------QSTAPC--VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPV----RTF---------- 90 (179)
Q Consensus 43 ---------------~~~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~----~~~---------- 90 (179)
.....+ +.+|...+..+.+.++ .++++++.|+.|++||+++++.. ...
T Consensus 123 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 202 (318)
T 4ggc_A 123 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 202 (318)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEE
T ss_pred EEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEE
Confidence 011112 5667788888999988 89999999999999998764211 000
Q ss_pred ----------------------------------cCCCCCeEEEEEeeCCCEEEEe--ccCCcEEEEEcCCCcccccccc
Q 038439 91 ----------------------------------RGHMNEKNFVGLTVNSEYIACG--SESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 91 ----------------------------------~~~~~~v~~~~~~~~~~~~~~~--~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
..+...+..+.|+|++..++++ +.|+.|++||+++++++..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~- 281 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK- 281 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-
Confidence 0123345667788888776654 478999999999988876543
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
. | ...|++++|+|++++|++|+.||+|+|||+.
T Consensus 282 -g---------H-~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 282 -G---------H-TSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp -C---------C-SSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred -C---------C-CCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 2 2 7789999999999999999999999999985
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.5e-28 Score=173.70 Aligned_cols=117 Identities=15% Similarity=0.239 Sum_probs=97.4
Q ss_pred eecccCceeEEEEeeC--CeEEE--ecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec--cCCcEEEEE
Q 038439 49 VHGHKKAVSYVKFLSN--DELAS--ASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS--ESNEVYVYH 122 (179)
Q Consensus 49 ~~~~~~~i~~~~~~~~--~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~vwd 122 (179)
...|...|.+++|+|. ..+++ |+.|+.|++||+.+++++..+..+ ..+.++.|+|++..+++++ .|+.|++||
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWK 350 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEE
Confidence 4456778889999988 55554 467999999999999888888754 5688899999999887654 799999999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+++++++..+. .| ...|++++|+|+|++|++|+.|++|++||+.
T Consensus 351 ~~~~~~v~~l~--gH----------~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 351 YPTMAKVAELK--GH----------TSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TTTCCEEEEEC--CC----------SSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCCcEEEEEc--CC----------CCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 99998876643 22 7789999999999999999999999999974
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=175.48 Aligned_cols=166 Identities=14% Similarity=0.188 Sum_probs=142.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeCCeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSNDEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~~~l 67 (179)
+.||.|++||+.+++.+..+. |..+|.+++|+|++..+++++ ..++.+ +..|...|.++.|+|++.+
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l 303 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKV 303 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEE
T ss_pred cCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEE
Confidence 468999999999988887775 788999999999997666655 233333 6779999999999999999
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc--------------------
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK-------------------- 127 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~-------------------- 127 (179)
++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++++.|+.|++||+++++
T Consensus 304 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (425)
T 1r5m_A 304 ISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIP 383 (425)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECC
T ss_pred EEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccch
Confidence 999999999999999999999999899999999999999999999999999999998876
Q ss_pred cccccccCCCCCCCCcccCCcc--eEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 128 PVTWHRFSSPDMDDTDEDAGSY--FISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.+..+. .+ .. .|.+++|+|++++|++++.||.|++||++
T Consensus 384 ~~~~~~-----------~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 384 LYASYQ-----------SS-QDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEEC-----------CT-TCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhhc-----------Cc-ccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 332222 12 33 89999999999999999999999999986
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-28 Score=175.26 Aligned_cols=168 Identities=12% Similarity=0.220 Sum_probs=137.7
Q ss_pred CCCccEEEEEcCCc-------eeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CCCcee--e--ecccCcee
Q 038439 1 MAYGKVKVWCTRQE-------ASVLNID-MKANICCVKYNPGSSNYIAKY-----------QSTAPC--V--HGHKKAVS 57 (179)
Q Consensus 1 ~~d~~i~vwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~--~~~~~~i~ 57 (179)
+.||+|+|||+.++ +++..+. |...|.+++|+|++..+++++ ..++.+ + .+|...|.
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY 180 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE
Confidence 46999999999987 4555664 889999999999985455554 344444 5 67999999
Q ss_pred EEEEeeC-CeEEEecCCCcEEEEecCCCcceeee-cCCCCC-eEEEEEeeCCCEEEEe---ccCCcEEEEEcCCCcc-cc
Q 038439 58 YVKFLSN-DELASASTDSTLRLWDVKENLPVRTF-RGHMNE-KNFVGLTVNSEYIACG---SESNEVYVYHKEISKP-VT 130 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~---~~d~~v~vwd~~~~~~-~~ 130 (179)
+++|+|+ .+|++++.|+.|++||+++++.+..+ ..|... +..+.|+|+++++++| +.|+.|++||+++++. +.
T Consensus 181 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 181 SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS 260 (402)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred EEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence 9999999 99999999999999999999988888 677765 8899999999999999 7899999999998665 32
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE-EeCCCcEEEEeecC
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT-ANSQGTIKVLVLAA 179 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~ 179 (179)
..... +...+..++|+|++++|++ ++.||.|++||+++
T Consensus 261 ~~~~~-----------~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 261 LQELD-----------TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp EEECC-----------CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred EEecc-----------CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 22221 1556899999999999965 55799999999863
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=7.9e-29 Score=175.27 Aligned_cols=177 Identities=10% Similarity=0.094 Sum_probs=143.5
Q ss_pred CCCccEEEEEcCC------ceeEE-----eec--------CCCceeEEEEcCCCCeEEEEe----------CCCcee--e
Q 038439 1 MAYGKVKVWCTRQ------EASVL-----NID--------MKANICCVKYNPGSSNYIAKY----------QSTAPC--V 49 (179)
Q Consensus 1 ~~d~~i~vwd~~~------~~~~~-----~~~--------~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~ 49 (179)
+.||.|++||+.+ ++.+. .+. +...|.+++|+|++ .+++++ +.++++ +
T Consensus 145 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 145 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 3689999999988 65554 442 67889999999999 555554 344555 6
Q ss_pred ec---c---cCceeEEEEeeC-CeEEEecCC---CcEEEEecCCCcceeeecC-------------CCCCeEEEEEeeCC
Q 038439 50 HG---H---KKAVSYVKFLSN-DELASASTD---STLRLWDVKENLPVRTFRG-------------HMNEKNFVGLTVNS 106 (179)
Q Consensus 50 ~~---~---~~~i~~~~~~~~-~~l~~~~~d---~~v~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~ 106 (179)
.. | ...|.+++|+|+ .+|++++.| +.|++||+++++.+..+.. |...|.+++|+|++
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 67 8 999999999999 999999999 9999999999999999988 89999999999999
Q ss_pred CEEEEeccCCcEEEEEcCCCccccccccC----CC------CCCCCcccCCcceEEEEEEccCC----------CeEEEE
Q 038439 107 EYIACGSESNEVYVYHKEISKPVTWHRFS----SP------DMDDTDEDAGSYFISAVCWKSDS----------PTMLTA 166 (179)
Q Consensus 107 ~~~~~~~~d~~v~vwd~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~i~~~~~~~~~----------~~l~~~ 166 (179)
++|++++.|+.|++||+++++.+..+... .+ ........ |...|.+++|+|++ ++|+++
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~ 382 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSL-AEPGVFDVKFLKKGWRSGMGADLNESLCCV 382 (397)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBC-SSCCEEEEEEECTTTSBSTTCTTSCEEEEE
T ss_pred CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccc-cCCceeEEEeccccccccccccccceEEEe
Confidence 99999999999999999998887666521 10 00000011 26789999999998 799999
Q ss_pred eCCCcEEEEeecC
Q 038439 167 NSQGTIKVLVLAA 179 (179)
Q Consensus 167 ~~dg~i~iwd~~~ 179 (179)
+.||.|++||+++
T Consensus 383 ~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 383 CLDRSIRWFREAG 395 (397)
T ss_dssp ETTTEEEEEEEEC
T ss_pred cCCCcEEEEEcCC
Confidence 9999999999864
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=4.2e-28 Score=179.03 Aligned_cols=162 Identities=20% Similarity=0.314 Sum_probs=137.2
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe---------CCCcee--eecccCceeEEEEeeC-CeEE
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~i~~~~~~~~-~~l~ 68 (179)
.||.|++||. +++.+..+. |..+|.+++|+|++..+++++ ..++.+ +.+|...|.+++|+|+ .+|+
T Consensus 364 ~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 364 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 6899999995 455666664 889999999999997666655 223344 7889999999999999 9999
Q ss_pred EecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCc
Q 038439 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGS 148 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (179)
+++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+.. |.
T Consensus 443 ~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~------------h~ 508 (577)
T 2ymu_A 443 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG------------HS 508 (577)
T ss_dssp EEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC------------CS
T ss_pred EEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC------------CC
Confidence 9999999999996 46778888899999999999999999999999999999995 4555544331 26
Q ss_pred ceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 149 YFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 149 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..|++++|+|++++|++++.||.|++||..
T Consensus 509 ~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 509 SSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 789999999999999999999999999953
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.3e-28 Score=175.44 Aligned_cols=178 Identities=13% Similarity=0.144 Sum_probs=140.9
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-CeEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~l~ 68 (179)
.||.|++||+.+++....+.....+....|+|++..+++++ ..++.+ +.+|...|.+++|+|+ .+|+
T Consensus 76 ~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 155 (420)
T 3vl1_A 76 LDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI 155 (420)
T ss_dssp ETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE
T ss_pred cCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE
Confidence 58999999999888776666556666668899996555554 333444 5689999999999999 8999
Q ss_pred EecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCC---------
Q 038439 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDM--------- 139 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~--------- 139 (179)
+++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.......
T Consensus 156 s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999988776654321100
Q ss_pred ---CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 140 ---DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 140 ---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.......+...+.+++|+|++++|++++.||.|++||+++
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 0000000124455566789999999999999999999863
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.3e-28 Score=172.82 Aligned_cols=168 Identities=15% Similarity=0.181 Sum_probs=138.5
Q ss_pred CCCccEEEEEcC-CceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC--
Q 038439 1 MAYGKVKVWCTR-QEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-- 64 (179)
+.||.|++||+. ....+..+. |...|.+++|+|++..+++++ ..++++ +..|...|.+++|+|+
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~ 272 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQS 272 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTST
T ss_pred cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCC
Confidence 468999999998 455555554 889999999999996666655 334444 6789999999999997
Q ss_pred CeEEEec--CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEE--eccCCcEEEEEcCCCccccccccCCCCCC
Q 038439 65 DELASAS--TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIAC--GSESNEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 65 ~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
..+++++ .|+.|++||+++++.+..+. +...+.+++|+|+++++++ |+.|+.|++||+++++......+..+
T Consensus 273 ~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h--- 348 (401)
T 4aez_A 273 NLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH--- 348 (401)
T ss_dssp TEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC---
T ss_pred CEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC---
Confidence 5666655 79999999999999888886 5678999999999999998 55899999999998766655444322
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.+++|+|++++|++++.||.|++||+.+
T Consensus 349 -------~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 349 -------DTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp -------SSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred -------CCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 67899999999999999999999999999863
No 57
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=178.83 Aligned_cols=179 Identities=15% Similarity=0.193 Sum_probs=142.8
Q ss_pred CCCccEEEEEcCCceeEEeecC-------CCceeEEEEcCCCCeEEEEe-CCC--------------cee--ee-cccCc
Q 038439 1 MAYGKVKVWCTRQEASVLNIDM-------KANICCVKYNPGSSNYIAKY-QST--------------APC--VH-GHKKA 55 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~-~~~--------------~~~--~~-~~~~~ 55 (179)
+.||.|++||+.+++.+..+.. ...|.+++|+|++..+++++ ..+ .++ +. +|...
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 4789999999999998888863 67899999999986666665 221 223 55 79999
Q ss_pred eeEEEEee-C-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCC-CEEEEeccCCcEEEEEcCCCcccccc
Q 038439 56 VSYVKFLS-N-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS-EYIACGSESNEVYVYHKEISKPVTWH 132 (179)
Q Consensus 56 i~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~vwd~~~~~~~~~~ 132 (179)
|.+++|+| + .+|++++.|+.|++||+++++++..+..|...|.+++|+|++ .++++++.|+.|++||+.+.......
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~ 344 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDE 344 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCccc
Confidence 99999999 6 899999999999999999999999999999999999999998 89999999999999999887644322
Q ss_pred cc------------CCC------C-----CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 133 RF------------SSP------D-----MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 133 ~~------------~~~------~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.. ..+ . ........+...+..++|+|+|++|++++.|+.|+||++.+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 345 QETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp ----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 11 000 0 00000111256677899999999999999999999999864
No 58
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.5e-29 Score=172.86 Aligned_cols=163 Identities=13% Similarity=0.054 Sum_probs=129.1
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-------------------CCCcee---eecccCceeE
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-------------------QSTAPC---VHGHKKAVSY 58 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------------~~~~~~---~~~~~~~i~~ 58 (179)
+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++ ...+.+ ..+|..+|.+
T Consensus 55 ~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 130 (343)
T 3lrv_A 55 CEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIY 130 (343)
T ss_dssp EETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEE
T ss_pred CCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEE
Confidence 469999999999998877776 455677777765 33333 122222 2356688999
Q ss_pred EEEee--C-CeEEEecCCCcEEEEecCCCcceeeec-CCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccc-cccc
Q 038439 59 VKFLS--N-DELASASTDSTLRLWDVKENLPVRTFR-GHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV-TWHR 133 (179)
Q Consensus 59 ~~~~~--~-~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~-~~~~ 133 (179)
++|+| + .++++++.|+.|++||+++++.+.... .+...+.+++|+|++.++++|+.|+.|++||+++++.+ ..+.
T Consensus 131 ~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp EECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred EEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 99999 8 899999999999999999988866653 34557999999999999999999999999999998765 3332
Q ss_pred cCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 134 FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 134 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. .|...|.+++|+|++.+|++++ |+.|++||+++
T Consensus 211 ~-----------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 211 V-----------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp C-----------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred c-----------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 1 1267899999999999999999 45999999863
No 59
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=166.51 Aligned_cols=168 Identities=9% Similarity=0.042 Sum_probs=129.8
Q ss_pred CCCccEEEEEcC---------CceeEEee--cCCCceeEEEEcC--CCCeEEEEe----------CCCcee--e-ecccC
Q 038439 1 MAYGKVKVWCTR---------QEASVLNI--DMKANICCVKYNP--GSSNYIAKY----------QSTAPC--V-HGHKK 54 (179)
Q Consensus 1 ~~d~~i~vwd~~---------~~~~~~~~--~~~~~v~~~~~~~--~~~~~~~~~----------~~~~~~--~-~~~~~ 54 (179)
|.|++|++|+.. +++.+..+ .|..+|.+++|+| ++..+++++ ..++.+ . ..|..
T Consensus 92 s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~ 171 (343)
T 3lrv_A 92 GPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDV 171 (343)
T ss_dssp CSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSC
T ss_pred cCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCC
Confidence 578999999665 44444444 3567899999999 886665555 333444 2 34566
Q ss_pred ceeEEEEeeC-CeEEEecCCCcEEEEecCCCcce-eeecC-CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 55 AVSYVKFLSN-DELASASTDSTLRLWDVKENLPV-RTFRG-HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
.|.+++|+|+ .++++|+.|+.|++||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|++||+++++....
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCccee
Confidence 8999999999 89999999999999999998877 77887 999999999999999999999 55999999999876544
Q ss_pred cccCCCCCCCCcccCCcceE--EEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFI--SAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
+..... + ...+ .+++|+|++++|++++. |+.+++|++.
T Consensus 251 ~~~~~~--------~-~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 251 YPTYTI--------P-EFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp SCCCBC--------------CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eccccc--------c-cccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 332100 0 1222 46999999999999998 9999999874
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=8.6e-28 Score=168.48 Aligned_cols=166 Identities=11% Similarity=0.150 Sum_probs=135.7
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee----eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC----VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~i~~~~~~~ 63 (179)
+.|+.|++||+.+++ .+..+. |...|.+++|+|++..+++++ ..++.. +..|...|.+++|+|
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 478999999999887 677775 889999999999997666665 222211 467889999999999
Q ss_pred C-CeEEEecCCCcEEEEecCCCcc---eee-ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC-------------
Q 038439 64 N-DELASASTDSTLRLWDVKENLP---VRT-FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI------------- 125 (179)
Q Consensus 64 ~-~~l~~~~~d~~v~iwd~~~~~~---~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~------------- 125 (179)
+ .++++++.|+.|++||++.++. ... ...|...+.+++|+|+++++++++.|+.|++||++.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccc
Confidence 9 9999999999999999988763 233 356788999999999999999999999999999753
Q ss_pred -----CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 126 -----SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 126 -----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
++.+..+. .|...|.+++|+|++++|++++.||.|++||++
T Consensus 187 ~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 187 SKMPFGELMFESS------------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SCCCTTCEEEECC------------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred cccchhhheEecC------------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 22222221 126789999999999999999999999999985
No 61
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.6e-28 Score=169.60 Aligned_cols=168 Identities=15% Similarity=0.191 Sum_probs=131.3
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCC--cee--eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPG--SSNYIAKY----------QST--APC--VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~--~~~--~~~~~~~i~~~~~ 61 (179)
|.|++|+|||+.+++ .+..+. |..+|.+++|+|+ +..+++++ ..+ +.+ +.+|...|.+++|
T Consensus 32 s~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~ 111 (316)
T 3bg1_A 32 SSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111 (316)
T ss_dssp ETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEE
T ss_pred eCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEE
Confidence 479999999998765 345554 8899999999863 65555555 222 223 6789999999999
Q ss_pred eeC---CeEEEecCCCcEEEEecCCCcc---eeeecCCCCCeEEEEEeeC-----------------CCEEEEeccCCcE
Q 038439 62 LSN---DELASASTDSTLRLWDVKENLP---VRTFRGHMNEKNFVGLTVN-----------------SEYIACGSESNEV 118 (179)
Q Consensus 62 ~~~---~~l~~~~~d~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~-----------------~~~~~~~~~d~~v 118 (179)
+|+ .+|++++.|+.|++||++.+.. ...+..|...+.+++|+|+ +++|++|+.|+.|
T Consensus 112 ~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v 191 (316)
T 3bg1_A 112 APHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLI 191 (316)
T ss_dssp CCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBC
T ss_pred CCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeE
Confidence 997 5799999999999999987532 3455678889999999997 4689999999999
Q ss_pred EEEEcCCCcc-ccccccCCCCCCCCcccCCcceEEEEEEccCC----CeEEEEeCCCcEEEEeec
Q 038439 119 YVYHKEISKP-VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDS----PTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 119 ~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~iwd~~ 178 (179)
++||++.... .....+.. |...|.+++|+|++ ++|++++.|++|++||++
T Consensus 192 ~lWd~~~~~~~~~~~~l~~----------h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 192 KLWKEEEDGQWKEEQKLEA----------HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp CEEEECTTSCEEEEECCBC----------CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred EEEEeCCCCccceeeeccc----------CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 9999975432 11122222 27789999999986 889999999999999975
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2.1e-27 Score=168.19 Aligned_cols=179 Identities=17% Similarity=0.191 Sum_probs=140.5
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCC--eEEEEe-----------CCCcee--eecccCceeEEEEeeC-
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSS--NYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~- 64 (179)
+.||.|++||+.+++.+..+.+...+.++.|+|.+. .+++++ ..++.+ +.+|...|.+++|+|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 368999999999999999999999999999999653 244444 334444 7789999999999999
Q ss_pred C-eEEEecCCCcEEEEecCCCc-ceeee---------------cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc
Q 038439 65 D-ELASASTDSTLRLWDVKENL-PVRTF---------------RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 65 ~-~l~~~~~d~~v~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
. .+++++.|+.|++||++.+. .+..+ ..|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 5 58999999999999998754 33333 4678889999999999999999999999999999876
Q ss_pred cccccccCCC-----------------------------------CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcE
Q 038439 128 PVTWHRFSSP-----------------------------------DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTI 172 (179)
Q Consensus 128 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 172 (179)
.......... .........|...|.+++|+|++++|++++.||.|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 358 (408)
T 4a11_B 279 NTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358 (408)
T ss_dssp BCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeE
Confidence 5433211100 00000112237789999999999999999999999
Q ss_pred EEEeecC
Q 038439 173 KVLVLAA 179 (179)
Q Consensus 173 ~iwd~~~ 179 (179)
++||+++
T Consensus 359 ~iw~~~~ 365 (408)
T 4a11_B 359 LAWVPSL 365 (408)
T ss_dssp EEEEECC
T ss_pred EEEeCCC
Confidence 9999864
No 63
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-27 Score=167.40 Aligned_cols=162 Identities=14% Similarity=0.141 Sum_probs=129.4
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCC-cee--eecccCceeEEEEeeCCeEE
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QST-APC--VHGHKKAVSYVKFLSNDELA 68 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~-~~~--~~~~~~~i~~~~~~~~~~l~ 68 (179)
+.|++|+|||..+++++..+.+..+|.+++|+++. ++++. ... +.+ +.. +...+++++ ..++
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la 151 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLV 151 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEE
T ss_pred CCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEE
Confidence 35789999999999999999999999999999874 33333 111 222 222 333445555 5555
Q ss_pred E--ecCCCcEEEEecCCCc----------------ceeeecCCCCCeEEEEEeeCCCEEEEeccCCc-EEEEEcCCCccc
Q 038439 69 S--ASTDSTLRLWDVKENL----------------PVRTFRGHMNEKNFVGLTVNSEYIACGSESNE-VYVYHKEISKPV 129 (179)
Q Consensus 69 ~--~~~d~~v~iwd~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-v~vwd~~~~~~~ 129 (179)
. ++.++.|++||+.+++ .+..+.+|...|.+++|+|+|++|++|+.|+. |++||+++++.+
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 5 6889999999999765 26788899999999999999999999999998 999999999888
Q ss_pred cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 130 TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..+.... |...|.+++|+|++++|++++.|+.|++||++
T Consensus 232 ~~~~~g~----------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 232 REFRRGL----------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EEEECTT----------CCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEEEcCC----------CCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 7665211 27789999999999999999999999999985
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=7.7e-28 Score=170.96 Aligned_cols=165 Identities=15% Similarity=0.267 Sum_probs=131.5
Q ss_pred CCccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEe-------------------------------------
Q 038439 2 AYGKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKY------------------------------------- 42 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~------------------------------------- 42 (179)
.||.|++||+.+++....+. |...|.+++|+|++..+++++
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 190 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLS 190 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEE
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEE
Confidence 46777777777776655554 466677777777775444443
Q ss_pred -------------C-CCcee--eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeC
Q 038439 43 -------------Q-STAPC--VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVN 105 (179)
Q Consensus 43 -------------~-~~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 105 (179)
+ ....+ +.+|...|.+++|+|+ .+|++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 191 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 191 SGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred EEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 1 22223 6778999999999999 99999999999999999999999999899999999999997
Q ss_pred CC-EEEEec--cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE--EeCCCcEEEEeecC
Q 038439 106 SE-YIACGS--ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT--ANSQGTIKVLVLAA 179 (179)
Q Consensus 106 ~~-~~~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~iwd~~~ 179 (179)
+. ++++++ .|+.|++||+++++.+..+.. ...+.+++|+|+++++++ |+.||.|++||+++
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVDA-------------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEEC-------------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-------------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 65 555654 799999999999988776643 567999999999999999 55899999999863
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-27 Score=162.86 Aligned_cols=163 Identities=19% Similarity=0.257 Sum_probs=136.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcC-CCCeEEEEe--------CCCcee--eec-ccCceeEEEEeeCCeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNP-GSSNYIAKY--------QSTAPC--VHG-HKKAVSYVKFLSNDEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~~~~--------~~~~~~--~~~-~~~~i~~~~~~~~~~l 67 (179)
+.||.|++|| .++.+..+. |..++.+++|+| ++..+++++ +..+.+ +.. |...+.+++|+|++.+
T Consensus 121 ~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~ 198 (313)
T 3odt_A 121 SWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHF 198 (313)
T ss_dssp ETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEE
T ss_pred eCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeE
Confidence 4689999999 556666664 889999999998 665555554 222333 444 8899999999999559
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++++.|+.|++||+++++.+..+..|...+.+++|+|++ .+++++.|+.|++||+++++.+..+...
T Consensus 199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~------------ 265 (313)
T 3odt_A 199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP------------ 265 (313)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS------------
T ss_pred EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc------------
Confidence 999999999999999999999999999999999999999 6889999999999999999877665432
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.+++|+|+++ +++++.||.|++||+++
T Consensus 266 ~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 266 AISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp SSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred CceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 56899999999998 66799999999999863
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=4.5e-28 Score=169.38 Aligned_cols=175 Identities=18% Similarity=0.257 Sum_probs=138.3
Q ss_pred CCccEEEEEcCCceeEEeec------CCCceeEEEEcCCCC---eEEEEe-----------CCCcee--eecccCceeEE
Q 038439 2 AYGKVKVWCTRQEASVLNID------MKANICCVKYNPGSS---NYIAKY-----------QSTAPC--VHGHKKAVSYV 59 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~------~~~~v~~~~~~~~~~---~~~~~~-----------~~~~~~--~~~~~~~i~~~ 59 (179)
.++.|++||+.+++.+..+. +...|.+++|+|++. .+++++ ..++.+ +.+|...|.++
T Consensus 42 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 42 GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 36799999999887666553 567899999999932 355554 344555 77899999999
Q ss_pred EEee-C-CeEEEecCCCcEEEEecCCCcceeee---cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 60 KFLS-N-DELASASTDSTLRLWDVKENLPVRTF---RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 60 ~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
+|+| + .+|++++.|+.|++||+++++.+..+ ..|...|.+++|+|+++++++++.|+.|++||+++++....+..
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccce
Confidence 9999 6 89999999999999999999888887 67899999999999999999999999999999998765543321
Q ss_pred C----C--C----------CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 135 S----S--P----------DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 135 ~----~--~----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
. . . .........|...|.+++|+ ++++++++.|+.|++||++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~ 259 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPG 259 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEES
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCC
Confidence 0 0 0 00000011137789999998 7799999999999999975
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=1.1e-27 Score=167.94 Aligned_cols=166 Identities=13% Similarity=0.134 Sum_probs=138.7
Q ss_pred CCCccEEEEEcCCceeEEee---cCCCceeEEEEcCCCCeEEEEe----------CCCce---e---eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEASVLNI---DMKANICCVKYNPGSSNYIAKY----------QSTAP---C---VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~----------~~~~~---~---~~~~~~~i~~~~~ 61 (179)
+.||.|++||+.+++....+ .|...|.+++|+|++..+++++ ..... . ...|...|.+++|
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred cCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 36899999999988754443 4788999999999996666555 11221 1 3568899999999
Q ss_pred eeC-CeEEEecCCCcEEEEecC------------------CCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEE
Q 038439 62 LSN-DELASASTDSTLRLWDVK------------------ENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYH 122 (179)
Q Consensus 62 ~~~-~~l~~~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd 122 (179)
+|+ .++++++.|+.|++||++ .++.+..+..|...+.+++|+|++++|++++.|+.|++||
T Consensus 151 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 151 HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 999 899999999999999954 5677888888999999999999999999999999999999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++++.+..+... ...+.+++|+|++++++++ .|+.|++|++++
T Consensus 231 ~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 231 ADKKMAVATLASE------------TLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GGGTTEEEEEECS------------SCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCCceeEEEccC------------CCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9998877665431 5689999999999988887 899999999853
No 68
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.3e-28 Score=176.61 Aligned_cols=178 Identities=17% Similarity=0.106 Sum_probs=129.7
Q ss_pred CCCccEEEEEcCCceeEEeec---CCCceeEEEEcCCCCeEEEEeC---------CCcee--eecccCceeEEEEeeC--
Q 038439 1 MAYGKVKVWCTRQEASVLNID---MKANICCVKYNPGSSNYIAKYQ---------STAPC--VHGHKKAVSYVKFLSN-- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~i~~~~~~~~-- 64 (179)
|.||+|++||++++....... +...+.+++|+|++..+++++. .++.+ +.+|...|.+++|+|+
T Consensus 184 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 184 SMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp CSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCS
T ss_pred eCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCc
Confidence 579999999998765543333 3446889999999965555442 22333 7789999999999998
Q ss_pred CeEEEecCCCcEEEEecCCCcceee---ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCC-----
Q 038439 65 DELASASTDSTLRLWDVKENLPVRT---FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSS----- 136 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~----- 136 (179)
.++++++.|+.|++||+++.+.... ...|...|.+++|+|+|.+|++++.|+.|++||+++++.........
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 5788999999999999988654433 34688899999999999999999999999999998765432211000
Q ss_pred ---------------------CC---------CC--------------CCcccCCcceEEEE-EEccCCCeEEEEeCCCc
Q 038439 137 ---------------------PD---------MD--------------DTDEDAGSYFISAV-CWKSDSPTMLTANSQGT 171 (179)
Q Consensus 137 ---------------------~~---------~~--------------~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg~ 171 (179)
.. .. .....+|...|.++ +|+|+|++|++|+ |+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~ 422 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYH 422 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSE
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCc
Confidence 00 00 00112235556666 6999999999876 789
Q ss_pred EEEEeecC
Q 038439 172 IKVLVLAA 179 (179)
Q Consensus 172 i~iwd~~~ 179 (179)
|+|||+++
T Consensus 423 i~iW~~~~ 430 (435)
T 4e54_B 423 ILIWSQQE 430 (435)
T ss_dssp EEECCCC-
T ss_pred EEEEECCc
Confidence 99999864
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-28 Score=178.74 Aligned_cols=169 Identities=8% Similarity=0.062 Sum_probs=130.8
Q ss_pred CCCccEEEEEcCCceeE----Eeec-CCCceeEEEEcCCC-----CeEEEEe-----------CCC-----------cee
Q 038439 1 MAYGKVKVWCTRQEASV----LNID-MKANICCVKYNPGS-----SNYIAKY-----------QST-----------APC 48 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~----~~~~-~~~~v~~~~~~~~~-----~~~~~~~-----------~~~-----------~~~ 48 (179)
+.|++|+|||+.+++.. ..+. +.+.|.+++|+|++ ..+++++ ..+ ++.
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~ 259 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS 259 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce
Confidence 46899999999876642 2343 57889999999972 1455554 111 111
Q ss_pred --eecccCceeEEEEeeCCeEEEecCCCcEEEEecCCCc-ceeeecCCCCCeEEE--EEeeCC-CEEEEeccCCcEEEEE
Q 038439 49 --VHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENL-PVRTFRGHMNEKNFV--GLTVNS-EYIACGSESNEVYVYH 122 (179)
Q Consensus 49 --~~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~~~~~~~d~~v~vwd 122 (179)
+.+|...|++++|+|++.|++|+.|++|++||+++++ +...+..|...|.++ .|+|++ .+|++++.|++|++||
T Consensus 260 ~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp EEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 5678899999999988889999999999999999763 455688899999999 567887 8999999999999999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++++....+..... ...|.+++|+|+++.+++++.|++|++||+++
T Consensus 340 ~~~~~~~~~~~~~~~----------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 340 PKDIATTKTTVSRFR----------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp GGGHHHHCEEEEECS----------CCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred CCCCCcccccccccc----------cCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 998776544321100 22478899999999999999999999999863
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=169.02 Aligned_cols=179 Identities=20% Similarity=0.282 Sum_probs=135.5
Q ss_pred CCCccEEEEEcCCce-eEEeec-C----CCceeEEE----EcCCCCeEEEEe----------CCCcee-eecccCceeEE
Q 038439 1 MAYGKVKVWCTRQEA-SVLNID-M----KANICCVK----YNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYV 59 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~-~~~~~~-~----~~~v~~~~----~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~ 59 (179)
+.||.|++||+.+++ .+..+. + ...+.+++ |+|++..+++++ +.++.. ...|...|.++
T Consensus 136 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~ 215 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSL 215 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEE
Confidence 368999999999876 566664 2 34799998 788886555554 333334 66788999999
Q ss_pred EEee---C-CeEEEecCCCcEEEEecCCCcceeeec-----CCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEcCCCccc
Q 038439 60 KFLS---N-DELASASTDSTLRLWDVKENLPVRTFR-----GHMNEKNFVGLTVNSE-YIACGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 60 ~~~~---~-~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~~~~~~ 129 (179)
+|+| + ..+++++.|+.|++||+++++.+..+. .|...|.+++|+|++. ++++++.||.|++||++++...
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 9999 8 999999999999999998876665554 8999999999999998 7999999999999999876544
Q ss_pred cccccCCCCC-------CCCcccCCcceEEEEEEccCCCeEE-EEeCCCcEEEEeecC
Q 038439 130 TWHRFSSPDM-------DDTDEDAGSYFISAVCWKSDSPTML-TANSQGTIKVLVLAA 179 (179)
Q Consensus 130 ~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~ 179 (179)
.......... .......|...|.+++|+|++++|+ +++.||.|++||+.+
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred ccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 2211111000 0000112277899999999999998 799999999999864
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.6e-29 Score=180.62 Aligned_cols=165 Identities=11% Similarity=0.099 Sum_probs=131.7
Q ss_pred CCCccEEEEEcCCcee-----------EEee-cCCCceeEEEEcCCCCeEEEEe----------CCC-cee--eecccCc
Q 038439 1 MAYGKVKVWCTRQEAS-----------VLNI-DMKANICCVKYNPGSSNYIAKY----------QST-APC--VHGHKKA 55 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~-----------~~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~-~~~--~~~~~~~ 55 (179)
|.||+|+|||+.+++. ...+ .|...|++++|+|++ .+++++ +.+ .+. +.+|...
T Consensus 232 s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~ 310 (524)
T 2j04_B 232 SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSY 310 (524)
T ss_dssp ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSC
T ss_pred ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeeccccc
Confidence 4699999999986642 1234 377899999999875 444444 222 233 7889999
Q ss_pred eeEE--EEeeC--CeEEEecCCCcEEEEecCCCcceeeecCCCC--CeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccc
Q 038439 56 VSYV--KFLSN--DELASASTDSTLRLWDVKENLPVRTFRGHMN--EKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 56 i~~~--~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~ 129 (179)
|.++ .|+|+ .+|++++.|++|++||+++++++..+.+|.. .+.+++|+|++..+++++.|+.|++||++++..+
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 9999 46665 4789999999999999998877766666543 4789999999999999999999999999988765
Q ss_pred cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 130 TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..+. + |...|++++|+|++++|++|+.||+|++||+.
T Consensus 391 ~~l~-----------g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 391 HPLV-----------S-RETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEEE-----------E-CSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred eeee-----------c-CCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 4432 1 27789999999999999999999999999964
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-28 Score=174.66 Aligned_cols=167 Identities=10% Similarity=0.158 Sum_probs=133.8
Q ss_pred CCCccEEEEEcCC---ce---eEEeecCCCceeEEEEcCCCCeEEEEeCCCcee---e------------e---------
Q 038439 1 MAYGKVKVWCTRQ---EA---SVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC---V------------H--------- 50 (179)
Q Consensus 1 ~~d~~i~vwd~~~---~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~------------~--------- 50 (179)
+.||+|+|||+.+ +. ....+.|..+|.+++|+|++..+++++..+... + .
T Consensus 83 s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~ 162 (437)
T 3gre_A 83 SDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINL 162 (437)
T ss_dssp ETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEG
T ss_pred cCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEc
Confidence 4799999999876 32 345557899999999999996666665222211 1 1
Q ss_pred -c--ccCceeEEE--EeeC-CeEEEecCCCcEEEEecCCCcceeeecC--CCCCeEEEEEeeCCCEEEEeccCCcEEEEE
Q 038439 51 -G--HKKAVSYVK--FLSN-DELASASTDSTLRLWDVKENLPVRTFRG--HMNEKNFVGLTVNSEYIACGSESNEVYVYH 122 (179)
Q Consensus 51 -~--~~~~i~~~~--~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd 122 (179)
. +...+.++. ++++ ..+++++.|+.|++||+++++.+..+.. |...|.+++|+|++.++++|+.||.|++||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 163 KNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp GGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 1 445566666 4456 8999999999999999999999999987 788999999999999999999999999999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEc----cCCCeEEEEeCCCcEEEEeec
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWK----SDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+++++++..+... + ...|.+++|+ |++++|++++.||.|++||++
T Consensus 243 ~~~~~~~~~~~~~----------~-~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 243 IRFNVLIRSWSFG----------D-HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp TTTTEEEEEEBCT----------T-CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred cCCccEEEEEecC----------C-CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 9998887765432 1 5589999665 467899999999999999986
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-27 Score=166.18 Aligned_cols=169 Identities=13% Similarity=0.144 Sum_probs=136.9
Q ss_pred CCCccEEEEEcC--CceeEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCCc--ee--eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTR--QEASVLNID-MKANICCVKYNPG--SSNYIAKY----------QSTA--PC--VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~~--~~--~~~~~~~i~~~~~ 61 (179)
+.||.|+|||+. +.+.+..+. |..+|.+++|+|+ +..+++++ ..++ .+ +..|...|.+++|
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 30 SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 109 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred ECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEe
Confidence 368999999998 556666665 8899999999977 75555555 2332 33 6679999999999
Q ss_pred eeC---CeEEEecCCCcEEEEecCCCc--ceeeecCCCCCeEEEEEee-------------CCCEEEEeccCCcEEEEEc
Q 038439 62 LSN---DELASASTDSTLRLWDVKENL--PVRTFRGHMNEKNFVGLTV-------------NSEYIACGSESNEVYVYHK 123 (179)
Q Consensus 62 ~~~---~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~vwd~ 123 (179)
+|+ .++++++.|+.|++||++... ....+..|...+.+++|+| ++.++++++.|+.|++||+
T Consensus 110 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 110 APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEE
T ss_pred CCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEe
Confidence 997 589999999999999998863 3446678899999999999 6999999999999999999
Q ss_pred CCCccccc--cccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEEeCCCcEEEEeecC
Q 038439 124 EISKPVTW--HRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 124 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~ 179 (179)
++++.... ..+.. |...|.+++|+|+ +++|++++.||.|++||+++
T Consensus 190 ~~~~~~~~~~~~~~~----------h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 190 NSDAQTYVLESTLEG----------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ETTTTEEEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCCCcceeeEEEEec----------ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 87654322 12221 2778999999999 89999999999999999863
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-28 Score=173.60 Aligned_cols=167 Identities=14% Similarity=0.261 Sum_probs=138.2
Q ss_pred CCCccEEEEEcCCce------eEEee----cCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecc-----
Q 038439 1 MAYGKVKVWCTRQEA------SVLNI----DMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGH----- 52 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~------~~~~~----~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~----- 52 (179)
+.||+|++||+.+++ ....+ .|...|.+++|+|++..+++++ +.++.+ +..+
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 212 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSG 212 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSC
T ss_pred cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccc
Confidence 468999999999876 33332 4788999999999954566665 333344 4444
Q ss_pred -cCceeEEEEeeC--CeEEEecCCC---cEEEEecCCC-cceeeec-CCCCCeEEEEEee-CCCEEEEeccCCcEEEEEc
Q 038439 53 -KKAVSYVKFLSN--DELASASTDS---TLRLWDVKEN-LPVRTFR-GHMNEKNFVGLTV-NSEYIACGSESNEVYVYHK 123 (179)
Q Consensus 53 -~~~i~~~~~~~~--~~l~~~~~d~---~v~iwd~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~ 123 (179)
...|.+++|+|+ .++++++.|+ .|++||++++ +++..+. .|...|.+++|+| ++.+|++++.|+.|++||+
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 788999999999 5899999998 9999999986 6677777 8999999999999 8999999999999999999
Q ss_pred CCCccccccccCCCCCCCCcccCCcceEEEEEEccCC-CeEEEEeCCCcEEEEeecC
Q 038439 124 EISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDS-PTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 179 (179)
++++++..+.. |...|.+++|+|++ .+|++++.|+.|++||+++
T Consensus 293 ~~~~~~~~~~~------------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 293 ESAEQLSQFPA------------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SSCCEEEEEEC------------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCccceeecC------------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 99887766542 16679999999998 8999999999999999863
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.5e-27 Score=169.89 Aligned_cols=176 Identities=10% Similarity=0.127 Sum_probs=139.7
Q ss_pred CCCccEEEEEcC--CceeEEee---cCCCceeEEEEcCCCCeEEEEeC----------CC---c-ee--eecccCceeEE
Q 038439 1 MAYGKVKVWCTR--QEASVLNI---DMKANICCVKYNPGSSNYIAKYQ----------ST---A-PC--VHGHKKAVSYV 59 (179)
Q Consensus 1 ~~d~~i~vwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~----------~~---~-~~--~~~~~~~i~~~ 59 (179)
+.||+|+|||+. +++.+..+ .+...|.+++|+|++..+++++. .. . ++ +.+|...|.++
T Consensus 122 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 201 (450)
T 2vdu_B 122 DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV 201 (450)
T ss_dssp GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE
T ss_pred CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEE
Confidence 368999999999 88877776 46789999999999966666541 11 1 22 56789999999
Q ss_pred EEeeC---C-eEEEecCCCcEEEEecCCCcceee-ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 60 KFLSN---D-ELASASTDSTLRLWDVKENLPVRT-FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 60 ~~~~~---~-~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
+|+|+ + +|++++.|+.|++||+++++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..
T Consensus 202 ~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp EEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEEC
T ss_pred EEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecc
Confidence 99997 5 789999999999999999888877 55899999999999 999999999999999999999887665542
Q ss_pred CCCC---------C----CCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEee
Q 038439 135 SSPD---------M----DDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVL 177 (179)
Q Consensus 135 ~~~~---------~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~ 177 (179)
.... . ...........+..++|+|++++|++++ .++.|++|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 281 NSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp HHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 1100 0 0000001145789999999999999999 8999999998
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=5.8e-27 Score=169.02 Aligned_cols=164 Identities=18% Similarity=0.295 Sum_probs=138.1
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEee--C-
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLS--N- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~--~- 64 (179)
+.||+|++||+.+++.+..+. |.+.|.+++|+|++ .+++++ .+++.+ +.+|...|.+++|++ +
T Consensus 139 s~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 217 (464)
T 3v7d_B 139 ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI 217 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC
T ss_pred cCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC
Confidence 479999999999999998886 89999999999988 555555 444555 778999999999996 4
Q ss_pred CeEEEecCCCcEEEEecCCCcc-----------------------eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEE
Q 038439 65 DELASASTDSTLRLWDVKENLP-----------------------VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vw 121 (179)
.++++++.|+.|++||+++.+. +..+.+|...+.++ +++++++++++.|+.|++|
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVW 295 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEE
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEE
Confidence 7899999999999999987643 34566677777665 6789999999999999999
Q ss_pred EcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 122 HKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 122 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|+++++.+..+.. + ...|.+++|+|+++++++|+.||.|++||+++
T Consensus 296 d~~~~~~~~~~~~--~----------~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 296 DVAQMKCLYILSG--H----------TDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp ETTTTEEEEEECC--C----------SSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred ECCCCcEEEEecC--C----------CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 9999887765432 1 67899999999999999999999999999863
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=2.9e-27 Score=175.35 Aligned_cols=170 Identities=14% Similarity=0.170 Sum_probs=143.8
Q ss_pred CCCccEEEEEcCCc--------eeEEeec-CCCceeEEEEcCCCCeEEEEeC------------CCcee--eecccCcee
Q 038439 1 MAYGKVKVWCTRQE--------ASVLNID-MKANICCVKYNPGSSNYIAKYQ------------STAPC--VHGHKKAVS 57 (179)
Q Consensus 1 ~~d~~i~vwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~i~ 57 (179)
+.||+|++||+.++ +.+..+. |..+|.+++|+|++..+++++. .++.+ +.+|...|.
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRIN 164 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEE
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEE
Confidence 36899999999754 5555665 7889999999999977776652 23334 778999999
Q ss_pred EEEEeeC-C-eEEEecCCCcEEEEecCCCcceeeecCCCC---CeEEEEEeeC-CCEEEEeccCCcEEEEEcCCCccccc
Q 038439 58 YVKFLSN-D-ELASASTDSTLRLWDVKENLPVRTFRGHMN---EKNFVGLTVN-SEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 58 ~~~~~~~-~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
+++|+|+ . .+++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ ++++++++.|+.|++||+++++.+..
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 9999999 5 899999999999999999999999999988 9999999999 99999999999999999999887766
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+.... ..|...|.+++|+ ++++|++++.|+.|++||+++
T Consensus 245 ~~~~~--------~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 245 IEDDQ--------EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp CCBTT--------BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred ecccc--------cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 52100 0127789999999 999999999999999999863
No 78
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=4.4e-27 Score=161.28 Aligned_cols=167 Identities=10% Similarity=0.083 Sum_probs=116.8
Q ss_pred ccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEeCCCceeeecccCceeEEEEee---C-CeEEEecCCCcEE
Q 038439 4 GKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLS---N-DELASASTDSTLR 77 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~l~~~~~d~~v~ 77 (179)
..+++|++.+++.+.... |...|..++++|+|+ +++. +..|...+..++|+| + ..|++++.|++|+
T Consensus 135 ~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~-~~~s-------~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIk 206 (356)
T 2w18_A 135 NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGG-GKEN-------QFLMPPEETILTFAEVQGMQEALLGTTIMNNIV 206 (356)
T ss_dssp EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSC-EEEE-------EEECCCSSCEEEEEEEETSTTEEEEEETTSEEE
T ss_pred CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCc-eeee-------eccCCCceeeEEeeccCCCCceEEEecCCCcEE
Confidence 357899999998888843 899999999999984 4433 567888899999998 5 8999999999999
Q ss_pred EEecCCCcceeeecCCC---CCeEEEEEeeCCCEE------------EEeccCCcEEEEEcCCCcccccccc---CCC--
Q 038439 78 LWDVKENLPVRTFRGHM---NEKNFVGLTVNSEYI------------ACGSESNEVYVYHKEISKPVTWHRF---SSP-- 137 (179)
Q Consensus 78 iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~------------~~~~~d~~v~vwd~~~~~~~~~~~~---~~~-- 137 (179)
|||+.+++++.++.+|. ..+.+++|+|+|.++ ++|+.|++|++||+.+++.+..+.. ..+
T Consensus 207 IWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~ 286 (356)
T 2w18_A 207 IWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG 286 (356)
T ss_dssp EEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC
T ss_pred EEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc
Confidence 99999999999997643 356667788877665 3344555556665555443221100 000
Q ss_pred --------------------------CCC---CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 138 --------------------------DMD---DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 138 --------------------------~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
... ....+|+...+..++|+|+|++|++|+.|++|+|||+.
T Consensus 287 ~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 287 RFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred eeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 000 00112212334468999999999999999999999974
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.7e-28 Score=185.08 Aligned_cols=177 Identities=7% Similarity=0.059 Sum_probs=139.0
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEEeeC-CeEE
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~~~~-~~l~ 68 (179)
+.||+|+||+..+.+....+.|..+|.+++|+| +..+++++ ..++.+ ...|...|++++|+|+ .+++
T Consensus 36 s~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~ 114 (902)
T 2oaj_A 36 TVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWML 114 (902)
T ss_dssp ETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEE
T ss_pred eCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEE
Confidence 468999999999888877778889999999999 75455554 334444 2236688999999999 9999
Q ss_pred EecCCCcEEEEecCCCcce-----------eeecCCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcCCCccccccccCC
Q 038439 69 SASTDSTLRLWDVKENLPV-----------RTFRGHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKEISKPVTWHRFSS 136 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~ 136 (179)
+|+.|+.|++||+++++.. ..+.+|...|.+++|+|+ +..+++|+.|+.| +||+++++.+..+....
T Consensus 115 sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~ 193 (902)
T 2oaj_A 115 IGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYEL 193 (902)
T ss_dssp EEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCB
T ss_pred EEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEeccc
Confidence 9999999999999987653 234668889999999996 5789999999999 99999988766554320
Q ss_pred CC-CCC-----CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 137 PD-MDD-----TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 137 ~~-~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.. ... ....+|...|++++|+|+|++|++++.||.|++||+++
T Consensus 194 ~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 194 PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 00 000 01122356799999999999999999999999999853
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-27 Score=169.25 Aligned_cols=164 Identities=17% Similarity=0.198 Sum_probs=140.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCc---------------eeEEEEcCCCCeEEEEe----------CCCcee--eecc
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKAN---------------ICCVKYNPGSSNYIAKY----------QSTAPC--VHGH 52 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~---------------v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~ 52 (179)
+.||.|++||+.+++.+..+. +... +.+++|+|++ .+++++ ..++++ +..|
T Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 246 (425)
T 1r5m_A 168 DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGH 246 (425)
T ss_dssp ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCC
T ss_pred ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccC
Confidence 368999999999999888876 3333 9999999987 565555 333344 6789
Q ss_pred cCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 53 KKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 53 ~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
...|.+++|+|+ .+|++++.|+.|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+++++.+..
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 999999999999 899999999999999999999899998899999999999999 999999999999999999887765
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+... ...+.+++|+|++++|++++.||.|++||++
T Consensus 326 ~~~~------------~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 326 SIVD------------GVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EECT------------TCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred cccC------------CccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 5421 6689999999999999999999999999975
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=3.1e-27 Score=169.34 Aligned_cols=166 Identities=19% Similarity=0.257 Sum_probs=135.0
Q ss_pred CCCccEEEEEcCC----------ceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CC----Cce---e--e
Q 038439 1 MAYGKVKVWCTRQ----------EASVLNID-MKANICCVKYNPGSSNYIAKY-----------QS----TAP---C--V 49 (179)
Q Consensus 1 ~~d~~i~vwd~~~----------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~----~~~---~--~ 49 (179)
+.||.|++||+.+ .+.+..+. |...|.+++|+|++..+++++ .. ... . +
T Consensus 148 ~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 227 (430)
T 2xyi_A 148 TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF 227 (430)
T ss_dssp CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE
T ss_pred CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee
Confidence 4689999999986 45555554 888999999999997455555 11 111 1 5
Q ss_pred ecccCceeEEEEeeC--CeEEEecCCCcEEEEecCCC---cceeeecCCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEc
Q 038439 50 HGHKKAVSYVKFLSN--DELASASTDSTLRLWDVKEN---LPVRTFRGHMNEKNFVGLTVNSE-YIACGSESNEVYVYHK 123 (179)
Q Consensus 50 ~~~~~~i~~~~~~~~--~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~ 123 (179)
.+|...|.+++|+|+ ..|++++.|+.|++||++++ +.+..+..|...|++++|+|++. ++++|+.||.|++||+
T Consensus 228 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 228 TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 689999999999995 88999999999999999986 56777888999999999999987 6889999999999999
Q ss_pred CCC-ccccccccCCCCCCCCcccCCcceEEEEEEccCCC-eEEEEeCCCcEEEEeec
Q 038439 124 EIS-KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP-TMLTANSQGTIKVLVLA 178 (179)
Q Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~ 178 (179)
++. +++..+.. |...|.+++|+|+++ +|++++.||.|++||++
T Consensus 308 ~~~~~~~~~~~~------------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 308 RNLKLKLHSFES------------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp TCTTSCSEEEEC------------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCCCeEEeec------------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 984 44443331 267899999999985 68999999999999985
No 82
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.5e-27 Score=165.22 Aligned_cols=164 Identities=13% Similarity=0.256 Sum_probs=133.7
Q ss_pred CCccEEEEEcCCceeEE--eecCCCceeEEEEcCC---CCeEEEEe----------CCCc-ee--eecccCceeEEEE--
Q 038439 2 AYGKVKVWCTRQEASVL--NIDMKANICCVKYNPG---SSNYIAKY----------QSTA-PC--VHGHKKAVSYVKF-- 61 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~--~~~~~~~v~~~~~~~~---~~~~~~~~----------~~~~-~~--~~~~~~~i~~~~~-- 61 (179)
.||+|+|||+.+++... .+.|..+|.+++|+|+ +..+++++ ..++ ++ +.+|...|.++.|
T Consensus 42 ~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 42 GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 38999999999887643 3468999999999998 55555555 2333 34 7889999999966
Q ss_pred ----eeC-CeEEEecCCCcEEEEecCCCc-ceeeecCCCC----CeEEEE----EeeCCCEEEEeccCCcEEEEEcCCCc
Q 038439 62 ----LSN-DELASASTDSTLRLWDVKENL-PVRTFRGHMN----EKNFVG----LTVNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 62 ----~~~-~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
+|+ ..|++++.|+.|++||+++++ .+..+..+.. .+.+++ |+|+++++++++.|+.|++||+++++
T Consensus 122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp GGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred ccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 567 899999999999999999876 6777765544 788888 67899999999999999999999987
Q ss_pred cccccccCCCCCCCCcccCCcceEEEEEEcc---CCCeEEEEeCCCcEEEEeec
Q 038439 128 PVTWHRFSSPDMDDTDEDAGSYFISAVCWKS---DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~ 178 (179)
....... ...|.+++|+| ++++|++++.||.|++||++
T Consensus 202 ~~~~~~~-------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 202 LRWETNI-------------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEEEEEC-------------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred eeeecCC-------------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 6544332 66899999999 99999999999999999985
No 83
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=4.1e-28 Score=170.70 Aligned_cols=163 Identities=11% Similarity=0.170 Sum_probs=124.7
Q ss_pred CCCccEEEEEcCCce---eEEee-cCCCceeEEEEcCCCCeEEEEe----------CCCc---ee--eec-ccCceeEEE
Q 038439 1 MAYGKVKVWCTRQEA---SVLNI-DMKANICCVKYNPGSSNYIAKY----------QSTA---PC--VHG-HKKAVSYVK 60 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~~---~~--~~~-~~~~i~~~~ 60 (179)
+.|++|++||+.+++ ....+ .|...|.+++|+|++..+++++ +.++ .+ +.+ |...|.+++
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 468999999999877 34443 5889999999999997666665 2222 12 555 999999999
Q ss_pred EeeC-CeEEEecCCCcEEEEecCC------------------CcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEE
Q 038439 61 FLSN-DELASASTDSTLRLWDVKE------------------NLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121 (179)
Q Consensus 61 ~~~~-~~l~~~~~d~~v~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vw 121 (179)
|+|+ .+|++++.|+.|++||++. ++++..+ .|...|.+++|+|++++|++++.|+.|++|
T Consensus 154 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 154 WHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp ECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred EcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999 8999999999999999852 3455566 788999999999999999999999999999
Q ss_pred EcCCCcc----ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 122 HKEISKP----VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 122 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
|+++++. +..+.. |...|.+++|+|++++|++++.++.+ +|+.
T Consensus 233 d~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKL------------SQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp EECSTTSCEEECCCEEC------------SSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred ECCCCCCcceeeEeecC------------CCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 9999876 333221 26789999999999999998877655 6664
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-26 Score=161.95 Aligned_cols=165 Identities=11% Similarity=0.151 Sum_probs=142.9
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCC-----Cc---------------------ee--eecc
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQS-----TA---------------------PC--VHGH 52 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~---------------------~~--~~~~ 52 (179)
+.||+|++||+.+++.+..+.+..+|.+++|+|++..+++++.. +. ++ +..|
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 46899999999999999999999999999999999766665422 11 11 3344
Q ss_pred cC--ceeEEEEeeC-CeEEEecCCCcEEEEecCC-CcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcc
Q 038439 53 KK--AVSYVKFLSN-DELASASTDSTLRLWDVKE-NLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKP 128 (179)
Q Consensus 53 ~~--~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~ 128 (179)
.. .+.+++|+|+ ..+++++.|+.|++||+++ .+.+..+..|...+.+++|+|++.+|++++.|+.|++||+++++.
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 44 8999999999 9999999999999999998 778888888999999999999999999999999999999999888
Q ss_pred ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC--------------cEEEEeec
Q 038439 129 VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG--------------TIKVLVLA 178 (179)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~ 178 (179)
+..+.. ...+..++|+|+++++++++.++ .+++||+.
T Consensus 253 ~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 253 LKKYET-------------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEEEEC-------------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred eeeecC-------------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 776653 66799999999999999999988 89999875
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.3e-27 Score=163.00 Aligned_cols=167 Identities=11% Similarity=0.193 Sum_probs=138.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEEeeC-CeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~~~~-~~l 67 (179)
+.||.|++||+.+++.+..+. |...|.+++|+|++..+++++ ..++.+ ...+...+.+++|+|+ ..+
T Consensus 51 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 51 SKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp ESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEE
T ss_pred eCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEE
Confidence 368999999999999988886 889999999999997666665 334444 3338889999999999 999
Q ss_pred EEecCC-----CcEEEEecCCCc-----------ceeeecCCCC--CeEEEEEeeCCCEEEEeccCCcEEEEEcCC-Ccc
Q 038439 68 ASASTD-----STLRLWDVKENL-----------PVRTFRGHMN--EKNFVGLTVNSEYIACGSESNEVYVYHKEI-SKP 128 (179)
Q Consensus 68 ~~~~~d-----~~v~iwd~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~-~~~ 128 (179)
++++.+ +.|++||+.... .+..+..+.. .+.+++|+|+++++++++.|+.|++||+++ .+.
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 210 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY 210 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE
T ss_pred EEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe
Confidence 999988 999999997653 3334444555 899999999999999999999999999998 555
Q ss_pred ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 129 VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+..+.. |...|.+++|+|++++|++++.|+.|++||+++
T Consensus 211 ~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 211 VDSIDL------------HEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEEEEC------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEec------------CCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 544432 166899999999999999999999999999863
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.2e-26 Score=166.34 Aligned_cols=177 Identities=18% Similarity=0.275 Sum_probs=134.3
Q ss_pred CCCccEEEEEcCCcee-------EEee-cCCCceeEEEEcCCCCeEEEEe-----------CCC---cee--eecccCce
Q 038439 1 MAYGKVKVWCTRQEAS-------VLNI-DMKANICCVKYNPGSSNYIAKY-----------QST---APC--VHGHKKAV 56 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~-------~~~~-~~~~~v~~~~~~~~~~~~~~~~-----------~~~---~~~--~~~~~~~i 56 (179)
+.||+|++||+.++.. ...+ .|...|.+++|+|++..+++++ +.. +++ +..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 4689999999987321 2333 4888999999999655666665 222 333 67899999
Q ss_pred eEEEEeeC-C-eEEEecCCCcEEEEecCC-CcceeeecCCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEcCCCcccccc
Q 038439 57 SYVKFLSN-D-ELASASTDSTLRLWDVKE-NLPVRTFRGHMNEKNFVGLTVNSE-YIACGSESNEVYVYHKEISKPVTWH 132 (179)
Q Consensus 57 ~~~~~~~~-~-~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~~~~~~~~~ 132 (179)
++++|+|+ . .+++++.|+.|++||++. ..++..+..|...|.+++|+|++. +|++++.|+.|++||+.........
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 99999998 4 688999999999999998 567888888999999999999985 6899999999999999873321100
Q ss_pred c---cCCCCCCCCcccCCcceEEEEEEccCCC-eEEEEeCCCcEEEEeec
Q 038439 133 R---FSSPDMDDTDEDAGSYFISAVCWKSDSP-TMLTANSQGTIKVLVLA 178 (179)
Q Consensus 133 ~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~ 178 (179)
. .......... ..|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 361 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 361 EDAEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp HHHHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cccccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 0 0000000001 11267899999999999 89999999999999985
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=5.3e-27 Score=168.22 Aligned_cols=176 Identities=14% Similarity=0.152 Sum_probs=130.4
Q ss_pred CCCccEEEEEcCCce-----------eEEeec-CC------------CceeEEEEcCCC--CeEEEEeCCCce-------
Q 038439 1 MAYGKVKVWCTRQEA-----------SVLNID-MK------------ANICCVKYNPGS--SNYIAKYQSTAP------- 47 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~-----------~~~~~~-~~------------~~v~~~~~~~~~--~~~~~~~~~~~~------- 47 (179)
+.||.|+|||+.+++ ....+. |. ..|.+++|+|++ ..+++++..+..
T Consensus 47 ~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~ 126 (447)
T 3dw8_B 47 DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISE 126 (447)
T ss_dssp ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEE
T ss_pred cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEeccc
Confidence 468999999998776 355554 66 789999999997 556666511111
Q ss_pred --------------------------------------------e-eecccCceeEEEEeeC-CeEEEecCCCcEEEEec
Q 038439 48 --------------------------------------------C-VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDV 81 (179)
Q Consensus 48 --------------------------------------------~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~ 81 (179)
. ..+|...|.+++|+|+ .+|+++ .|+.|++||+
T Consensus 127 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~ 205 (447)
T 3dw8_B 127 RDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHL 205 (447)
T ss_dssp EEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEET
T ss_pred ccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEEC
Confidence 1 2579999999999999 888888 7999999999
Q ss_pred CC-Cccee-------eecCCCCCeEEEEEeeCC-CEEEEeccCCcEEEEEcCCCcc----ccccccCCCCCCCCcccCCc
Q 038439 82 KE-NLPVR-------TFRGHMNEKNFVGLTVNS-EYIACGSESNEVYVYHKEISKP----VTWHRFSSPDMDDTDEDAGS 148 (179)
Q Consensus 82 ~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~ 148 (179)
+. ++.+. .+..|...|.+++|+|++ .+|++|+.|+.|++||+++++. ...+..............|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (447)
T 3dw8_B 206 EITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEII 285 (447)
T ss_dssp TEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHT
T ss_pred CCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccC
Confidence 84 33333 356788999999999998 9999999999999999998875 33322110000000000012
Q ss_pred ceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 149 YFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 149 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..|.+++|+|++++|++++. +.|++||++
T Consensus 286 ~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 286 SSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp TCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred ceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 38999999999999999999 999999986
No 88
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.9e-27 Score=168.71 Aligned_cols=143 Identities=15% Similarity=0.146 Sum_probs=120.8
Q ss_pred ceeEEEEcCCCCeEEEEe-----------C--CCcee--ee--cccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcc
Q 038439 25 NICCVKYNPGSSNYIAKY-----------Q--STAPC--VH--GHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLP 86 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~-----------~--~~~~~--~~--~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~ 86 (179)
.|.+++|+|+++.+++++ . .++.+ +. .|...|.+++|+|+ .+|++++.++.+++|++.+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 599999999997765655 3 44454 33 56788999999999 8999999999999999988765
Q ss_pred ee----eecCCCCCeEEEEEeeC---CCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC
Q 038439 87 VR----TFRGHMNEKNFVGLTVN---SEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD 159 (179)
Q Consensus 87 ~~----~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 159 (179)
.. .+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+.. . |...|.+++|+ +
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----------~-h~~~v~~~~~s-d 251 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF----------G-HKHFVSSICCG-K 251 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC----------C-CSSCEEEEEEC-S
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec----------C-CCCceEEEEEC-C
Confidence 44 67788999999999999 99999999999999999998876654321 1 26789999999 9
Q ss_pred CCeEEEEeCCCcEEEEeecC
Q 038439 160 SPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 160 ~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++|++++.|+.|++||+++
T Consensus 252 ~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 252 DYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp TTEEEEEESSSEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEECCC
Confidence 99999999999999999863
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=4.3e-27 Score=166.37 Aligned_cols=179 Identities=13% Similarity=0.198 Sum_probs=137.8
Q ss_pred CCCccEEEEEcCCcee-----EEeec-C-----CCceeEEEEc----CCCCe-EEEEe----------CC------Ccee
Q 038439 1 MAYGKVKVWCTRQEAS-----VLNID-M-----KANICCVKYN----PGSSN-YIAKY----------QS------TAPC 48 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~-----~~~~~-~-----~~~v~~~~~~----~~~~~-~~~~~----------~~------~~~~ 48 (179)
+.||.|++||+.+++. +..+. + ...|.+++|+ |++.. +++++ .. .+.+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 3689999999998875 66665 5 4899999999 99976 55554 12 1111
Q ss_pred -------e-------ecccCceeEEEEeeCCeEEEecCCCcEEEEecCCCcceeeecC---C---CCCeEEEEEeeCCCE
Q 038439 49 -------V-------HGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRG---H---MNEKNFVGLTVNSEY 108 (179)
Q Consensus 49 -------~-------~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~ 108 (179)
+ ..|...|.+++|+|++.+++++.|+.|++||+++++.+..+.. | ...+.+++|+|++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE
Confidence 2 3478889999999988888999999999999999999999988 8 899999999999999
Q ss_pred EEEeccC---CcEEEEEcCCCccccccccCCCCC-CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 109 IACGSES---NEVYVYHKEISKPVTWHRFSSPDM-DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 109 ~~~~~~d---~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|++++.| +.|++||+++++.+..+....... .......|...|.+++|+|++++|++++.||.|++||+++
T Consensus 248 l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 248 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999 999999999988776554211000 0000000277899999999999999999999999999863
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=2.7e-27 Score=180.75 Aligned_cols=166 Identities=21% Similarity=0.259 Sum_probs=144.4
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC-CeE
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~-~~l 67 (179)
.||.|+|||+.+++.+..+. |..+|.+++|+|+++.+++++ .+++.+ +.+|...|.+++|+|+ ..+
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEE
Confidence 58999999999999888886 889999999999997666665 344555 7889999999999999 899
Q ss_pred EEecCCCcEEEEecCCC-cceeeecCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCccc
Q 038439 68 ASASTDSTLRLWDVKEN-LPVRTFRGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDED 145 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 145 (179)
++++.|+.|++||+.++ .....+..|...+.+++|+| ++..+++++.|+.|++||+++++........
T Consensus 113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------- 182 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG---------- 182 (814)
T ss_dssp EEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC----------
T ss_pred EEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC----------
Confidence 99999999999999886 66677888999999999999 8899999999999999999887766554421
Q ss_pred CCcceEEEEEEcc--CCCeEEEEeCCCcEEEEeec
Q 038439 146 AGSYFISAVCWKS--DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 146 ~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~ 178 (179)
+...+..++|+| +++++++++.||.|++||++
T Consensus 183 -~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 183 -QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp -CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred -CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 146789999999 99999999999999999975
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=2.4e-27 Score=167.30 Aligned_cols=165 Identities=12% Similarity=0.114 Sum_probs=128.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CC----Ccee-eecccCceeEEEEee
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-----------QS----TAPC-VHGHKKAVSYVKFLS 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~----~~~~-~~~~~~~i~~~~~~~ 63 (179)
+.|+.|++||+. ++.+..+. |...|.+++|+|+++.+++++ +. ...+ ..+|...|.+++|+|
T Consensus 182 ~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 182 DSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNP 260 (383)
T ss_dssp ETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECT
T ss_pred CCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcC
Confidence 368999999994 56666664 889999999999997455554 22 3344 447999999999999
Q ss_pred -C-CeEEEecCCCcEEEEecCCCcceeeecCCC-----------------CCeEEEEEeeCCCEEEEeccCCcEEEEEcC
Q 038439 64 -N-DELASASTDSTLRLWDVKENLPVRTFRGHM-----------------NEKNFVGLTVNSEYIACGSESNEVYVYHKE 124 (179)
Q Consensus 64 -~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~ 124 (179)
+ .+|++++.|+.|++||+++++....+..|. ..+..++|+|++++ +++.|+.|++||++
T Consensus 261 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 261 TDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp TTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred CCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 8 899999999999999999887766665432 23444666777766 77899999999999
Q ss_pred CCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 125 ISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++.+..+.... +...+..++|+|++++|++++ ||.|++||+++
T Consensus 339 ~~~~~~~l~~~~----------~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 339 SGGLVHQLRDPN----------AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TCCEEEEECBTT----------BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCceeeeecCCC----------CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 998876654321 155677789999999999997 99999999864
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2.1e-26 Score=163.00 Aligned_cols=179 Identities=12% Similarity=0.171 Sum_probs=138.7
Q ss_pred CCCccEEEEEcCCceeEEeec--------------CCCceeEEEEcC-CCCeEEEEe----------CCCcee-eecccC
Q 038439 1 MAYGKVKVWCTRQEASVLNID--------------MKANICCVKYNP-GSSNYIAKY----------QSTAPC-VHGHKK 54 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~--------------~~~~v~~~~~~~-~~~~~~~~~----------~~~~~~-~~~~~~ 54 (179)
+.||.|++||+.+++....+. |...|.+++|+| ++..+++++ ..++.+ ...+..
T Consensus 63 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (408)
T 4a11_B 63 GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE 142 (408)
T ss_dssp ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCC
Confidence 468999999999876554443 888999999999 554444444 333344 344778
Q ss_pred ceeEEEEeeC----CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCC-EEEEeccCCcEEEEEcCCCcc-
Q 038439 55 AVSYVKFLSN----DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSE-YIACGSESNEVYVYHKEISKP- 128 (179)
Q Consensus 55 ~i~~~~~~~~----~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~~~~~- 128 (179)
.+.++.++|. .++++++.++.|++||+++++.+..+..|...|.+++|+|++. .+++++.|+.|++||++++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~ 222 (408)
T 4a11_B 143 TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC 222 (408)
T ss_dssp CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC
T ss_pred ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc
Confidence 8999999986 3899999999999999999999999999999999999999998 488999999999999988653
Q ss_pred ccccccCC---CCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 129 VTWHRFSS---PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 129 ~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...+.... ..........|...|.+++|+|++++|++++.||.|++||+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 223 LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 22221110 0011111122377899999999999999999999999999863
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-26 Score=157.66 Aligned_cols=163 Identities=13% Similarity=0.228 Sum_probs=129.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-------------------------------------
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY------------------------------------- 42 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~------------------------------------- 42 (179)
+.||.|++||+.+++....+. |...|.+++|+|++..+++++
T Consensus 36 ~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 115 (313)
T 3odt_A 36 SRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDG 115 (313)
T ss_dssp ETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETT
T ss_pred EcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCC
Confidence 468999999999888777665 788999999999996666555
Q ss_pred --------------CCCcee--eecccCceeEEEEee-C-CeEEEecCCCcEEEEecCCCcceeeecC-CCCCeEEEEEe
Q 038439 43 --------------QSTAPC--VHGHKKAVSYVKFLS-N-DELASASTDSTLRLWDVKENLPVRTFRG-HMNEKNFVGLT 103 (179)
Q Consensus 43 --------------~~~~~~--~~~~~~~i~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~ 103 (179)
+..+.+ +..|...+.++.|.| + ..+++++.|+.|++|| ..+....+.. +...+.+++|+
T Consensus 116 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 116 VVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV 193 (313)
T ss_dssp EEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE
T ss_pred EEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc
Confidence 111111 445677777888877 5 7888888888888888 3445566665 78899999999
Q ss_pred eCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 104 VNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 104 ~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|++. +++++.|+.|++||+++++.+..+.. |...|.+++|+|++ .|++++.||.|++||+++
T Consensus 194 ~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKLVDMHTGDVLRTYEG------------HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp ETTE-EEEEETTSEEEEEETTTCCEEEEEEC------------CSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred CCCe-EEEccCCCeEEEEECCchhhhhhhhc------------CCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 9998 89999999999999999887766542 16789999999999 589999999999999763
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=170.52 Aligned_cols=157 Identities=13% Similarity=0.229 Sum_probs=116.9
Q ss_pred cCCCceeEEEEcCCCCeEEEEeCCC-----------cee---------eecccCceeEEEEeeC--CeEEEecCCCcEEE
Q 038439 21 DMKANICCVKYNPGSSNYIAKYQST-----------APC---------VHGHKKAVSYVKFLSN--DELASASTDSTLRL 78 (179)
Q Consensus 21 ~~~~~v~~~~~~~~~~~~~~~~~~~-----------~~~---------~~~~~~~i~~~~~~~~--~~l~~~~~d~~v~i 78 (179)
.|...|.+++|+|++..+++ +..+ +.+ +.+|...|.+++|+|+ .+|++++.|+.|++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLS-ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEE-ECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcceEEEEEcCCCCEEEE-eCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 48889999999999965544 5211 111 2378889999999998 68999999999999
Q ss_pred EecCCCcc----eeeecCCCC------------CeEEEEEeeCCCEEEEeccCCcEEEEEcCC-CccccccccCCCCCCC
Q 038439 79 WDVKENLP----VRTFRGHMN------------EKNFVGLTVNSEYIACGSESNEVYVYHKEI-SKPVTWHRFSSPDMDD 141 (179)
Q Consensus 79 wd~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~ 141 (179)
||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++||+++ ++++..+.........
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccc
Confidence 99998876 677877765 8999999999999999998 9999999997 6666554431100000
Q ss_pred C---cccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 T---DEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. .....-..+..++|+|++++|++++.||.|++||+++
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 0 0000001134599999999999999999999999863
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.1e-26 Score=184.23 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=147.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeC---
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSN--- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~--- 64 (179)
+.||+|++||+.+++.+..+. |...|.+++|+|++..+++++ .+++.+ +.+|...|.+++|+|+
T Consensus 634 ~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 713 (1249)
T 3sfz_A 634 GADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH 713 (1249)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSC
T ss_pred eCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCc
Confidence 468999999999999988886 889999999999996666655 445555 7899999999999995
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCC------
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD------ 138 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~------ 138 (179)
..+++++.|+.|++||+++++.+..+.+|...|.+++|+|+++++++++.||.|++||+++++...........
T Consensus 714 ~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 793 (1249)
T 3sfz_A 714 LLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDP 793 (1249)
T ss_dssp CEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC------
T ss_pred eEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCc
Confidence 57899999999999999999999999999999999999999999999999999999999887654433221100
Q ss_pred -------------------------------------CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 139 -------------------------------------MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 139 -------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
........|...+.+++|+|+++++++++.||.|++||+.
T Consensus 794 ~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~ 870 (1249)
T 3sfz_A 794 PEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870 (1249)
T ss_dssp --CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT
T ss_pred cccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC
Confidence 0000011236678899999999999999999999999975
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.5e-27 Score=179.31 Aligned_cols=171 Identities=12% Similarity=0.241 Sum_probs=138.1
Q ss_pred CCCccEEEEEcCCce--eEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCC---cee-eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEA--SVLNID-MKANICCVKYNPG--SSNYIAKY----------QST---APC-VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~---~~~-~~~~~~~i~~~~~ 61 (179)
+.||+|++||+.+++ .+..+. |..+|.+++|+|+ +..+++++ ... ... +.+|...|.++.|
T Consensus 74 s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 74 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred eCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 468999999999886 444444 8899999999999 75555555 112 122 6789999999999
Q ss_pred ee-------------C-CeEEEecCCCcEEEEecCCC----cceeeecCCCCCeEEEEEeeC---CCEEEEeccCCcEEE
Q 038439 62 LS-------------N-DELASASTDSTLRLWDVKEN----LPVRTFRGHMNEKNFVGLTVN---SEYIACGSESNEVYV 120 (179)
Q Consensus 62 ~~-------------~-~~l~~~~~d~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~v 120 (179)
+| + ..+++++.|+.|++||++++ .....+..|...|.+++|+|+ +.++++++.||.|++
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 99 6 89999999999999999876 455677889999999999999 899999999999999
Q ss_pred EEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 121 YHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 121 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
||+++++.......... ..+...|++++|+|+++++++++.||.|++||++
T Consensus 234 wd~~~~~~~~~~~~~~~-------~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKE-------EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEESSSSSCCBCCBSSS-------SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred ecCCCCCCcceeEEecc-------CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99998753221111110 1126789999999999999999999999999986
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.5e-26 Score=161.59 Aligned_cols=179 Identities=16% Similarity=0.230 Sum_probs=129.0
Q ss_pred CCCccEEEEEcCC-ceeE-Eee-cCCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEE--eeC
Q 038439 1 MAYGKVKVWCTRQ-EASV-LNI-DMKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKF--LSN 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~--~~~ 64 (179)
+.||.|+|||+.+ ++.+ ..+ .|..+|.+++|+|++..+++++ ..++.+ +..|...|.+++| +|+
T Consensus 61 ~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 61 SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS
T ss_pred CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC
Confidence 3689999999987 5444 444 4899999999999997666665 344444 7789999999999 677
Q ss_pred -CeEEEecCCCcEEEEecCCCcceeeecCCC-----------------------------------------CCeEEEEE
Q 038439 65 -DELASASTDSTLRLWDVKENLPVRTFRGHM-----------------------------------------NEKNFVGL 102 (179)
Q Consensus 65 -~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----------------------------------------~~v~~~~~ 102 (179)
.+|++++.|+.|++||+++++.+..+..+. ....++.+
T Consensus 141 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T 3mmy_A 141 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAI 220 (368)
T ss_dssp CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEE
T ss_pred CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEE
Confidence 789999999999999999887766655432 23445555
Q ss_pred eeCCCE----EEEeccCCcEEEEEcCCCcc-ccccccCCCC--CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEE
Q 038439 103 TVNSEY----IACGSESNEVYVYHKEISKP-VTWHRFSSPD--MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVL 175 (179)
Q Consensus 103 ~~~~~~----~~~~~~d~~v~vwd~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 175 (179)
.++... +++++.|+.|++||++.... .....+..+. ........|...|.+++|+|++++|++++.||.|++|
T Consensus 221 ~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iw 300 (368)
T 3mmy_A 221 FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW 300 (368)
T ss_dssp EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEE
Confidence 555443 88999999999999987643 1112221110 0000001112369999999999999999999999999
Q ss_pred eecC
Q 038439 176 VLAA 179 (179)
Q Consensus 176 d~~~ 179 (179)
|+++
T Consensus 301 d~~~ 304 (368)
T 3mmy_A 301 DKDA 304 (368)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9863
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=1.4e-26 Score=176.85 Aligned_cols=167 Identities=16% Similarity=0.261 Sum_probs=143.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCC-cee--eecccCceeEEEEee-C-
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QST-APC--VHGHKKAVSYVKFLS-N- 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~-~~~--~~~~~~~i~~~~~~~-~- 64 (179)
+.||.|++||+.+++.+..+. |...|.+++|+|+++.+++++ ..+ ... +.+|...|.+++|+| +
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEE
T ss_pred eCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCC
Confidence 468999999999999888886 889999999999997666665 222 233 778999999999999 6
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCC-CCeEEEEEee--CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHM-NEKNFVGLTV--NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
..+++++.|+.|++||+.+++....+..+. ..+..++|+| ++.++++++.|+.|++||+++++.+..+..
T Consensus 154 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------- 226 (814)
T 3mkq_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG------- 226 (814)
T ss_dssp EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-------
T ss_pred CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-------
Confidence 899999999999999999887777776554 7899999999 899999999999999999999887665432
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|...|.+++|+|+++++++++.||.|++||+.+
T Consensus 227 -----~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 227 -----HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp -----CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred -----CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 166899999999999999999999999999753
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=7.2e-26 Score=163.31 Aligned_cols=163 Identities=14% Similarity=0.191 Sum_probs=136.6
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcC--CCCeEEEEe----------CCCc---------------------
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNP--GSSNYIAKY----------QSTA--------------------- 46 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~----------~~~~--------------------- 46 (179)
+.||+|++||+.+++++..+. |...|.+++|++ ++..+++++ ....
T Consensus 180 s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 180 STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred eCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 479999999999999988886 889999999984 554444444 1111
Q ss_pred --ee--eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEE
Q 038439 47 --PC--VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121 (179)
Q Consensus 47 --~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vw 121 (179)
.+ +.+|...+.++ +++ ..+++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++|+.|+.|++|
T Consensus 260 ~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp TTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 12 56777778776 566 899999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 122 HKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 122 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
|+++++++..+.. + ...|.+++|+ +++|++++.||.|++||+++
T Consensus 338 d~~~~~~~~~~~~--h----------~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 338 DLENGELMYTLQG--H----------TALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp ETTTTEEEEEECC--C----------SSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred ECCCCcEEEEEeC--C----------CCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 9999887766532 1 6789999997 58999999999999999863
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=9.1e-26 Score=167.34 Aligned_cols=162 Identities=10% Similarity=0.154 Sum_probs=135.4
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC-CCce------------e-eecccCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ-STAP------------C-VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~------------~-~~~~~~~i~~~~~~~~-~~l 67 (179)
++.+.+|+..+++.+..+.+...+.+++|+ +..+++++. .+.. . +.+|...|.+++|+|+ .+|
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 503 (615)
T 1pgu_A 426 DDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYI 503 (615)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEE
T ss_pred CCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEE
Confidence 456666776678888888889999999999 544544443 3322 2 4568899999999999 999
Q ss_pred EEecCCCcEEEEecCCCcceeeecC-CCCCeEEEEEee----------CCCEEEEeccCCcEEEEEcCCC-ccccccccC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRG-HMNEKNFVGLTV----------NSEYIACGSESNEVYVYHKEIS-KPVTWHRFS 135 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~~~~~~~d~~v~vwd~~~~-~~~~~~~~~ 135 (179)
++++.|+.|++||+.+++.+..+.. |...|.+++|+| ++++|++++.|+.|++||++++ +++..+.
T Consensus 504 ~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-- 581 (615)
T 1pgu_A 504 AAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN-- 581 (615)
T ss_dssp EEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT--
T ss_pred EEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh--
Confidence 9999999999999999999988887 999999999999 9999999999999999999987 4444332
Q ss_pred CCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 136 SPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. |...|.+++|+|+++ |++++.||.|++|++++
T Consensus 582 ---------~-h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 582 ---------A-HKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ---------S-STTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred ---------c-CccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 1 277899999999999 99999999999999864
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.4e-27 Score=167.04 Aligned_cols=175 Identities=11% Similarity=0.149 Sum_probs=134.0
Q ss_pred CCCccEEEEEcCCceeEEeec---CCCceeEEEEcCCCCeEEEEe----------CCCcee--ee-cccCceeEEEEee-
Q 038439 1 MAYGKVKVWCTRQEASVLNID---MKANICCVKYNPGSSNYIAKY----------QSTAPC--VH-GHKKAVSYVKFLS- 63 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~-~~~~~i~~~~~~~- 63 (179)
+.||+|++||+++++++..+. |...|++++|+|++..+++++ +.++++ +. .|..+|.+++|+|
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 368999999999999888885 678999999999996555555 334444 33 7778999997765
Q ss_pred ---C-CeEEEecCCCcEEEEecCCCcceeeecC--------------------------CCCCeEEEEEeeCCCEEEEec
Q 038439 64 ---N-DELASASTDSTLRLWDVKENLPVRTFRG--------------------------HMNEKNFVGLTVNSEYIACGS 113 (179)
Q Consensus 64 ---~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~~~~~ 113 (179)
+ .++++++.|+.|++||+++++.+..+.. |...|.+++|+ ++++|++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 4 5899999999999999998887766653 34457888999 778999999
Q ss_pred cCCcEEEEEcCCCccccccccCC-------------------------CCCCCCcccCCcceEEEEEEccC--CCeEEEE
Q 038439 114 ESNEVYVYHKEISKPVTWHRFSS-------------------------PDMDDTDEDAGSYFISAVCWKSD--SPTMLTA 166 (179)
Q Consensus 114 ~d~~v~vwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~ 166 (179)
.|+.|++||+++++....+.... ..........|...|++++|+++ +.+|++|
T Consensus 348 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~ 427 (437)
T 3gre_A 348 ATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVAC 427 (437)
T ss_dssp GGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEE
T ss_pred CCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEE
Confidence 99999999999987765543210 00000111124788999999998 7899999
Q ss_pred eCCCcEEEEe
Q 038439 167 NSQGTIKVLV 176 (179)
Q Consensus 167 ~~dg~i~iwd 176 (179)
+.||.|+||+
T Consensus 428 ~~dG~I~iw~ 437 (437)
T 3gre_A 428 DNSGLIGIFQ 437 (437)
T ss_dssp ETTSCEEEEC
T ss_pred cCCceEEEeC
Confidence 9999999995
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.8e-26 Score=159.23 Aligned_cols=165 Identities=13% Similarity=0.158 Sum_probs=134.7
Q ss_pred CCCccEEEEEcCCce----eEEeecCCCceeEEEEcCCCC-eEEEEe--------C--CCcee--eec--ccCceeEEEE
Q 038439 1 MAYGKVKVWCTRQEA----SVLNIDMKANICCVKYNPGSS-NYIAKY--------Q--STAPC--VHG--HKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~~~--------~--~~~~~--~~~--~~~~i~~~~~ 61 (179)
+.||.|+|||+.+++ ......|...|.+++|+|++. .+++++ + ..... +.+ |...|.+++|
T Consensus 30 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~ 109 (342)
T 1yfq_A 30 SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICK 109 (342)
T ss_dssp ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEE
T ss_pred cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEe
Confidence 368999999998877 555557899999999999996 565555 1 22222 667 9999999999
Q ss_pred eeCCeEEEecCCCcEEEEecCC---------CcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC-Cccccc
Q 038439 62 LSNDELASASTDSTLRLWDVKE---------NLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI-SKPVTW 131 (179)
Q Consensus 62 ~~~~~l~~~~~d~~v~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~-~~~~~~ 131 (179)
+|...+++++.|+.|++||+++ ++++..+. +...+.+++|+|++ +++++.|+.|++||+++ +.....
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~ 186 (342)
T 1yfq_A 110 YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGT 186 (342)
T ss_dssp ETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCE
T ss_pred CCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccce
Confidence 9878899999999999999987 77777776 78899999999887 89999999999999998 554322
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEcc-CCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKS-DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~ 178 (179)
..... +...+.+++|+| +++++++++.||.|++|+++
T Consensus 187 ~~~~~----------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 187 IEESG----------LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp EEECS----------CSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred eeecC----------CCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 22211 166799999999 99999999999999999975
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=6.8e-27 Score=185.38 Aligned_cols=166 Identities=14% Similarity=0.226 Sum_probs=146.8
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee-eecccCceeEEEEeeCCeEEE
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC-VHGHKKAVSYVKFLSNDELAS 69 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~i~~~~~~~~~~l~~ 69 (179)
.||.|++||+.+++....+. |...|.+++|+|+++.+++++ ..++.+ ...|...|.++.|+|++.+++
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 1060 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLS 1060 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEE
T ss_pred CCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 68999999999998887775 889999999999997777666 333444 668899999999999988999
Q ss_pred ecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcc
Q 038439 70 ASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSY 149 (179)
Q Consensus 70 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (179)
++.|+.|++||+.+++....+..|...|.+++|+|+++++++++.|+.|++||+.+++++..+.. |..
T Consensus 1061 ~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~------------h~~ 1128 (1249)
T 3sfz_A 1061 WSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKG------------HNG 1128 (1249)
T ss_dssp EESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCC------------CSS
T ss_pred EECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeecc------------CCC
Confidence 99999999999999999999999999999999999999999999999999999998887655431 267
Q ss_pred eEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 150 FISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 150 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.|++++|+|++++|++++.||.|++||+.+
T Consensus 1129 ~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1129 CVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp CEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 899999999999999999999999999863
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.5e-26 Score=172.73 Aligned_cols=169 Identities=13% Similarity=0.150 Sum_probs=136.8
Q ss_pred CCCccEEEEEcC--CceeEEeec-CCCceeEEEEcCC--CCeEEEEe----------CCCc--ee--eecccCceeEEEE
Q 038439 1 MAYGKVKVWCTR--QEASVLNID-MKANICCVKYNPG--SSNYIAKY----------QSTA--PC--VHGHKKAVSYVKF 61 (179)
Q Consensus 1 ~~d~~i~vwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~~~~~~----------~~~~--~~--~~~~~~~i~~~~~ 61 (179)
+.||+|+|||+. +++.+..+. |.++|.+++|+|+ +..+++++ ..++ .+ +.+|...|.+++|
T Consensus 28 ~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 28 SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 469999999998 455666665 8899999999988 75555555 2332 33 6779999999999
Q ss_pred eeC---CeEEEecCCCcEEEEecCCC--cceeeecCCCCCeEEEEEee-------------CCCEEEEeccCCcEEEEEc
Q 038439 62 LSN---DELASASTDSTLRLWDVKEN--LPVRTFRGHMNEKNFVGLTV-------------NSEYIACGSESNEVYVYHK 123 (179)
Q Consensus 62 ~~~---~~l~~~~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~vwd~ 123 (179)
+|+ ..+++++.|+.|++||++.+ .....+..|...|.+++|+| ++.++++|+.||.|++||+
T Consensus 108 sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~ 187 (753)
T 3jro_A 108 APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (753)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEE
T ss_pred CCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEec
Confidence 997 68999999999999999876 33456678899999999999 5899999999999999999
Q ss_pred CCCccccc--cccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEEeCCCcEEEEeecC
Q 038439 124 EISKPVTW--HRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 124 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~ 179 (179)
+++..... ..+.. |...|.+++|+|+ ++++++++.||.|++||+++
T Consensus 188 ~~~~~~~~~~~~~~~----------h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 188 NSDAQTYVLESTLEG----------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ETTTTEEEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred cCCcccceeeeeecC----------CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 98743211 12221 2778999999999 89999999999999999863
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.3e-25 Score=155.55 Aligned_cols=158 Identities=16% Similarity=0.224 Sum_probs=125.5
Q ss_pred cCCCceeEEEEcCCCCeEEEEe----------CCC----cee--eecccCceeEEEEee--C-CeEEEecCCCcEEEEec
Q 038439 21 DMKANICCVKYNPGSSNYIAKY----------QST----APC--VHGHKKAVSYVKFLS--N-DELASASTDSTLRLWDV 81 (179)
Q Consensus 21 ~~~~~v~~~~~~~~~~~~~~~~----------~~~----~~~--~~~~~~~i~~~~~~~--~-~~l~~~~~d~~v~iwd~ 81 (179)
.|.+.|++++|+|++..+++++ ..+ +.+ +.+|...|.+++|+| + .+|++++.|+.|++||+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 88 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence 4889999999999996665555 211 222 678999999999999 5 89999999999999999
Q ss_pred CCC---------cceeeecCCCCCeEEEEEeeC--CCEEEEeccCCcEEEEEcCCCccccccccCC--------------
Q 038439 82 KEN---------LPVRTFRGHMNEKNFVGLTVN--SEYIACGSESNEVYVYHKEISKPVTWHRFSS-------------- 136 (179)
Q Consensus 82 ~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~-------------- 136 (179)
+.+ +.+..+..|...+.+++|+|+ +.++++++.|+.|++||+++++.+..+....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccc
Confidence 876 457778889999999999999 9999999999999999998876554332100
Q ss_pred -------------C------------------CCC---CCcccCCcceEEEEEEccCC----CeEEEEeCCCcEEEEeec
Q 038439 137 -------------P------------------DMD---DTDEDAGSYFISAVCWKSDS----PTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 137 -------------~------------------~~~---~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~iwd~~ 178 (179)
. ... ......|...|.+++|+|++ ++|++++.||.|++||++
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 0 000 11112237789999999998 899999999999999985
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=1.4e-25 Score=155.75 Aligned_cols=174 Identities=16% Similarity=0.089 Sum_probs=133.9
Q ss_pred CCCccEEEEEc-CCceeEEeec--CCCceeEEEEcCCCCeEEEEe----------CC---------Ccee-eecccCcee
Q 038439 1 MAYGKVKVWCT-RQEASVLNID--MKANICCVKYNPGSSNYIAKY----------QS---------TAPC-VHGHKKAVS 57 (179)
Q Consensus 1 ~~d~~i~vwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~----------~~---------~~~~-~~~~~~~i~ 57 (179)
+.||.|++||+ .+++...... |...|.+++|+| +..+++++ +. .+++ ...|...|.
T Consensus 76 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIF 154 (342)
T ss_dssp ETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEE
T ss_pred cCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceE
Confidence 36899999999 8887655556 889999999999 75666555 22 3334 223888999
Q ss_pred EEEEeeCCeEEEecCCCcEEEEecCC-Ccc--eeeecCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCC------c
Q 038439 58 YVKFLSNDELASASTDSTLRLWDVKE-NLP--VRTFRGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEIS------K 127 (179)
Q Consensus 58 ~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~------~ 127 (179)
+++|+|+. +++++.|+.|++||+++ +.. ......+...+.+++|+| +++++++++.||.|++|+++.. +
T Consensus 155 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 155 TMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 99999876 99999999999999987 542 334446778899999999 9999999999999999999876 4
Q ss_pred cccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 128 PVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
....+.. +....... .|...|.+++|+|++++|++++.||.|++||+++
T Consensus 234 ~~~~~~~--~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 234 KRFAFRC--HRLNLKDT-NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp TCEEEEC--CCCCTTCC-SSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred cceeeec--cccccccc-ccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 4433332 11100001 1245899999999999999999999999999863
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.6e-25 Score=156.91 Aligned_cols=173 Identities=14% Similarity=0.144 Sum_probs=128.6
Q ss_pred CCccEEEEEcCCc-eeEEeecCCCceeEEEEcCCCCeEEEE-e-----------CCCc---------------e-e--ee
Q 038439 2 AYGKVKVWCTRQE-ASVLNIDMKANICCVKYNPGSSNYIAK-Y-----------QSTA---------------P-C--VH 50 (179)
Q Consensus 2 ~d~~i~vwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-----------~~~~---------------~-~--~~ 50 (179)
.|+.|++||+.++ +.+..+.. +...+++++ ..++++ | ..++ + + +.
T Consensus 117 ~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~ 192 (355)
T 3vu4_A 117 YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK 192 (355)
T ss_dssp ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC
T ss_pred EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE
Confidence 3789999999988 66655554 555666776 245554 3 2221 1 3 88
Q ss_pred cccCceeEEEEeeC-CeEEEecCCCc-EEEEecCCCcceeeec-C-CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCC
Q 038439 51 GHKKAVSYVKFLSN-DELASASTDST-LRLWDVKENLPVRTFR-G-HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 51 ~~~~~i~~~~~~~~-~~l~~~~~d~~-v~iwd~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~ 126 (179)
+|...|.+++|+|+ .+|++++.|++ |++||+++++++..+. + |...|.+++|+|++++|++++.|+.|++||++..
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 99999999999999 99999999998 9999999999999998 4 8999999999999999999999999999999875
Q ss_pred ccccccccCCC-----CCCC------CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 127 KPVTWHRFSSP-----DMDD------TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 127 ~~~~~~~~~~~-----~~~~------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.......+... .... ............++|+++++.+++++.||.+++|++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 273 QDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred CCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 43221111110 0000 0000002223568999999999999999999999874
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=1.1e-24 Score=156.47 Aligned_cols=160 Identities=16% Similarity=0.249 Sum_probs=130.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeCCeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSNDEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~~~l 67 (179)
+.||+|++||+.+++.+..+. |...|.+++|+++ .+++++ .+++.+ +.+|...|.++.|++ +.+
T Consensus 136 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l 212 (445)
T 2ovr_B 136 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRV 212 (445)
T ss_dssp ETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TEE
T ss_pred ECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCC--EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC-CEE
Confidence 468999999999999888886 8889999999842 444444 344455 778999999998854 689
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++++.|+.|++||+++++.+..+..|...+.++++ ++.++++++.|+.|++||+++++.+..+.. +
T Consensus 213 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~---------- 278 (445)
T 2ovr_B 213 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG--H---------- 278 (445)
T ss_dssp EEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC--C----------
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC--C----------
Confidence 99999999999999999988899889999999888 788899999999999999998877655432 1
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.+++| +++++++++.||.|++||+++
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 308 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTT
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCC
Confidence 567888888 778888888888888888753
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=6e-25 Score=157.60 Aligned_cols=159 Identities=21% Similarity=0.333 Sum_probs=133.4
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCce----e-eecccCceeEEEEeeC
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAP----C-VHGHKKAVSYVKFLSN 64 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~----~-~~~~~~~i~~~~~~~~ 64 (179)
+.||+|++||+.+++.+..+. |...|.+++|+++ .+++++ ..++. . +.+|...|.++.| ..
T Consensus 190 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~ 266 (435)
T 1p22_A 190 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DD 266 (435)
T ss_dssp ETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ET
T ss_pred cCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CC
Confidence 468999999999999888886 7889999999853 455554 22221 1 6789999999998 23
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
+.+++++.|+.|++||+++++.+..+..|...+.++++ ++.++++|+.|+.|++||+++++.+..+..
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---------- 334 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG---------- 334 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC----------
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC----------
Confidence 89999999999999999999999999999999999988 578999999999999999999887765542
Q ss_pred cCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
|...|.+++| ++++|++|+.||.|++||++
T Consensus 335 --h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 335 --HEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp --CSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred --CcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 1678999998 78999999999999999974
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=9.9e-26 Score=159.86 Aligned_cols=164 Identities=12% Similarity=0.184 Sum_probs=111.1
Q ss_pred CCCccEEEEEcCCceeEE-eecCCCceeEEEEcCCCCeEEEEe-----------CCCce---------------------
Q 038439 1 MAYGKVKVWCTRQEASVL-NIDMKANICCVKYNPGSSNYIAKY-----------QSTAP--------------------- 47 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~--------------------- 47 (179)
|+|++|+|||+.++.++. .+.|..+|.+++|+|++..+++++ ..++.
T Consensus 163 s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 163 GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 579999999998776554 446899999999999987666666 11100
Q ss_pred -----e-eecccCceeEEEEe-eC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEE------------------E
Q 038439 48 -----C-VHGHKKAVSYVKFL-SN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFV------------------G 101 (179)
Q Consensus 48 -----~-~~~~~~~i~~~~~~-~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~------------------~ 101 (179)
. ..+|...+.++.|. |+ ..+++++.|+.+++||+..++....+..+...+..+ .
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCE
T ss_pred cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEE
Confidence 0 24677889999987 56 899999999999999998876655554444333332 2
Q ss_pred Eee--CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 102 LTV--NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 102 ~~~--~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
++| ++.++++|+.|+.|++||+.+++....... + ...|.+++|+|+|++|++++.+| +.+|.+
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-----------~-~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-----------L-GMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-----------C-SSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC-----------C-CCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 333 344677888999999999998877654321 1 56899999999999999999776 656554
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=1.2e-24 Score=156.09 Aligned_cols=160 Identities=17% Similarity=0.303 Sum_probs=133.9
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeCCeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSNDEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~~~l 67 (179)
+.||+|++||+.+++.+..+. |...|.+++| ++..+++++ .+++.+ +.+|...|.+++|++ +.+
T Consensus 150 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~l 226 (435)
T 1p22_A 150 LRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMM 226 (435)
T ss_dssp ESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-TEE
T ss_pred eCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-CEE
Confidence 468999999999999988886 8899999999 454454444 344555 778999999999965 699
Q ss_pred EEecCCCcEEEEecCCCcce---eeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 68 ASASTDSTLRLWDVKENLPV---RTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
++++.|+.|++||+++++.. ..+.+|...|.+++| +++++++|+.|+.|++||+++++.+..+.. +
T Consensus 227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~------- 295 (435)
T 1p22_A 227 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG--H------- 295 (435)
T ss_dssp EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC--C-------
T ss_pred EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC--C-------
Confidence 99999999999999987665 567788999999998 788999999999999999999887766542 1
Q ss_pred cCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...|.++.| +++++++|+.||.|++||+++
T Consensus 296 ---~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 296 ---KRGIACLQY--RDRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp ---SSCEEEEEE--ETTEEEEEETTSCEEEEETTT
T ss_pred ---CCcEEEEEe--CCCEEEEEeCCCeEEEEECCC
Confidence 667888888 478999999999999999863
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=7.1e-25 Score=154.11 Aligned_cols=167 Identities=8% Similarity=-0.004 Sum_probs=123.3
Q ss_pred CCccEEEEEcCCceeE----Eeec------CCCceeEEEEcCCCCeEEEEe------------CCCcee-eecccCceeE
Q 038439 2 AYGKVKVWCTRQEASV----LNID------MKANICCVKYNPGSSNYIAKY------------QSTAPC-VHGHKKAVSY 58 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~----~~~~------~~~~v~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~i~~ 58 (179)
.|+++++|++.+.+.. .... +...+.+++|+|||+.+++++ .+++++ ...|...|.+
T Consensus 102 ~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~ 181 (365)
T 4h5i_A 102 GNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKD 181 (365)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCE
T ss_pred CCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEE
Confidence 5889999998754321 1111 334589999999997665443 334444 3357888999
Q ss_pred EEEeeC-CeEEEecCCCcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEeccCC----cEEEEEcCCCcccc-
Q 038439 59 VKFLSN-DELASASTDSTLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSESN----EVYVYHKEISKPVT- 130 (179)
Q Consensus 59 ~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~v~vwd~~~~~~~~- 130 (179)
++|+|+ .++++++. +.+++|+..+++.+. ....|...+.+++|+|+++++++++.|+ .+++|++.......
T Consensus 182 v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 182 LHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 999999 88888875 456677777666543 3345778899999999999999998887 68889987654322
Q ss_pred -ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 131 -WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 131 -~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...+.. |...|++++|+|+|++|++|+.|+.|+|||+++
T Consensus 261 ~~~~~~~----------~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 261 RSKQVTN----------RFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEES----------SCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred eeeeecC----------CCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 222221 166899999999999999999999999999864
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=2.4e-24 Score=152.14 Aligned_cols=165 Identities=10% Similarity=0.058 Sum_probs=133.9
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee-eecccCceeEEEEeeC-CeE
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC-VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~i~~~~~~~~-~~l 67 (179)
+.|++|++||+.+++.+..+.+...+.+++|+|++..+++++ .+++.+ ...+...+.+++|+|+ +.+
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l 88 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQV 88 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred CCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEE
Confidence 468999999999999999998778899999999998776665 344444 2223348999999999 655
Q ss_pred -EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEE-EEeccCCcEEEEEcCCCccccccccCCCCCCCCccc
Q 038439 68 -ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI-ACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDED 145 (179)
Q Consensus 68 -~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 145 (179)
++++.++.|++||+.+++.+..+.. ...+.+++|+|+++++ ++++.++.|++||+++++.+..+..
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------- 156 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV----------- 156 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-----------
Confidence 5566789999999999988877765 4468999999999977 6888899999999999887766543
Q ss_pred CCcceEEEEEEccCCCeE-EEEeCCCcEEEEeecC
Q 038439 146 AGSYFISAVCWKSDSPTM-LTANSQGTIKVLVLAA 179 (179)
Q Consensus 146 ~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~ 179 (179)
...+..++|+|+++.+ ++++.++.|++||+++
T Consensus 157 --~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 157 --GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp --CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred --CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 3457899999999987 5677899999999863
No 114
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=7.2e-25 Score=151.91 Aligned_cols=165 Identities=21% Similarity=0.260 Sum_probs=125.5
Q ss_pred ceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CC-----Ccee--eecccCceeEEEEeeC-CeEEEecCC
Q 038439 14 EASVLNID-MKANICCVKYNPGSSNYIAKY-----------QS-----TAPC--VHGHKKAVSYVKFLSN-DELASASTD 73 (179)
Q Consensus 14 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~-----~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d 73 (179)
.++..++. |.+.|++++|+|++..++++| .. ..+. +.+|...|.+++|+|+ .+|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 34455565 899999999999865666655 11 1122 6789999999999999 999999999
Q ss_pred CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccc-----------cC--CC---
Q 038439 74 STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHR-----------FS--SP--- 137 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~-----------~~--~~--- 137 (179)
+.|++|+............+...+..+.+++++.++++++.|+.+++||+.......... +. ..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 999999999888777777778888888899999999999999999999976543221110 00 00
Q ss_pred ------------------CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 138 ------------------DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 138 ------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
........ |...|++++|+|++++|++++.||.|++||+++
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred EEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 00001122 367899999999999999999999999999863
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=3.3e-24 Score=154.05 Aligned_cols=167 Identities=15% Similarity=0.257 Sum_probs=135.8
Q ss_pred CCCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEEEEeeCCeE
Q 038439 1 MAYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYVKFLSNDEL 67 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~~~~~~~~l 67 (179)
+.||.|++||+.+++++..+. |...|.+++| ++..+++++ .+++++ +.+|...+.++.+.+ +.+
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l 332 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NIL 332 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-TEE
T ss_pred cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC-CEE
Confidence 368999999999998888886 7788999999 554555554 344555 778888888887643 799
Q ss_pred EEecCCCcEEEEecCCCcceeeecC---CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRG---HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
++++.|+.|++||+++++.+..+.. |...|.+++|+ ++++++|+.||.|++||+++++.+..+.....
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------- 403 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES------- 403 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTT-------
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecccc-------
Confidence 9999999999999999998888876 77889999985 68999999999999999999987766522110
Q ss_pred cCCcceEEEEEEccCCCeEEEEeCCCc----EEEEeecC
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANSQGT----IKVLVLAA 179 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~dg~----i~iwd~~~ 179 (179)
..+...|++++|+|++.++++|+.||. +.+||++.
T Consensus 404 ~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 404 GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 112678999999999999999999998 99999863
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=4.4e-24 Score=150.82 Aligned_cols=164 Identities=10% Similarity=0.076 Sum_probs=135.3
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee-eecccCceeEEEEeeC-CeE-
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC-VHGHKKAVSYVKFLSN-DEL- 67 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~i~~~~~~~~-~~l- 67 (179)
.|++|++||+.+++.+..+.+...+.+++|+|+++.+++++ ..++.+ ...+...+.+++|+|+ +.+
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLY 131 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE
T ss_pred CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEE
Confidence 58999999999999999998777999999999998777766 233333 2234456899999999 655
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEE-EEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI-ACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
++++.++.|++||+.+++.+..+..+ ..+..++|+|+++++ ++++.++.|++||+++++.......
T Consensus 132 ~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------------ 198 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV------------ 198 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------------
T ss_pred EEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec------------
Confidence 78888999999999999888887754 456899999999887 5778899999999999877655543
Q ss_pred CcceEEEEEEccCCCeEEEEe---CCCcEEEEeecC
Q 038439 147 GSYFISAVCWKSDSPTMLTAN---SQGTIKVLVLAA 179 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~---~dg~i~iwd~~~ 179 (179)
...+.+++|+|++++|++++ .++.|++||+++
T Consensus 199 -~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 199 -EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp -SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred -CCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 45789999999999999888 689999999763
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=5.3e-25 Score=153.78 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=127.7
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEE--cCCCCeEEEEe----------CCCcee--eec---------------
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKY--NPGSSNYIAKY----------QSTAPC--VHG--------------- 51 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~----------~~~~~~--~~~--------------- 51 (179)
+.||.|++||+.+++.+....|..+|.+++| +|++..+++++ +.++++ +..
T Consensus 105 ~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred cCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 4689999999999998888889999999999 88885555554 122221 111
Q ss_pred --------------------------ccCceeEEEEeeC-Ce----EEEecCCCcEEEEecCCC---cceeeecCCCC--
Q 038439 52 --------------------------HKKAVSYVKFLSN-DE----LASASTDSTLRLWDVKEN---LPVRTFRGHMN-- 95 (179)
Q Consensus 52 --------------------------~~~~i~~~~~~~~-~~----l~~~~~d~~v~iwd~~~~---~~~~~~~~~~~-- 95 (179)
+...+.++.+.++ .. +++++.|+.|++||++.. +.+..+..|..
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 1233455555555 33 999999999999999886 55667777665
Q ss_pred ----------CeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE
Q 038439 96 ----------EKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT 165 (179)
Q Consensus 96 ----------~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 165 (179)
.|.+++|+|++++|++++.||.|++||+++++++..+.. + ...|.+++|+|++++|++
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~----------~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ--L----------DQPISACCFNHNGNIFAY 332 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--C----------SSCEEEEEECTTSSCEEE
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC--C----------CCCceEEEECCCCCeEEE
Confidence 699999999999999999999999999999887765432 1 678999999999999999
Q ss_pred EeCCCcEEEEe
Q 038439 166 ANSQGTIKVLV 176 (179)
Q Consensus 166 ~~~dg~i~iwd 176 (179)
++.|+..+.|+
T Consensus 333 ~s~d~~~~~~~ 343 (368)
T 3mmy_A 333 ASSYDWSKGHE 343 (368)
T ss_dssp EECCCSTTCGG
T ss_pred Eeccccccccc
Confidence 99987655443
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-25 Score=162.45 Aligned_cols=159 Identities=9% Similarity=0.054 Sum_probs=120.5
Q ss_pred CccEEEEEcCCce--eEEeecCCCceeEEEEcCCCCeEEEEeCCCcee----------eecccC-----ceeEEEEeeC-
Q 038439 3 YGKVKVWCTRQEA--SVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC----------VHGHKK-----AVSYVKFLSN- 64 (179)
Q Consensus 3 d~~i~vwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~i~~~~~~~~- 64 (179)
||+++.|++.+++ .+..+.+...|.+++|||+|..+++++..+... +. |.. .+.+++|+|+
T Consensus 63 dg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG 141 (588)
T 2j04_A 63 LEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIE 141 (588)
T ss_dssp CCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSS
T ss_pred CCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCC
Confidence 3444555555444 233445678899999999997777666443332 34 555 4999999999
Q ss_pred CeEEEecCCCcEEEEecCCCcc-------eeee----cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccc---c
Q 038439 65 DELASASTDSTLRLWDVKENLP-------VRTF----RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV---T 130 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~---~ 130 (179)
++|++|+.||+|++||+.+++. +.++ .+|...|.+++|+|+| +++++.|+.|++||+.+++.. .
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~ 219 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSR 219 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEE
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccccee
Confidence 9999999999999999998753 5665 5677899999999999 788888999999999887642 1
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.+. .. |...|.+++|+ ++.|++++ +++|++||+.
T Consensus 220 tL~-~~----------h~~~V~svaFs--g~~LASa~-~~tIkLWd~~ 253 (588)
T 2j04_A 220 MIQ-NA----------SRRKITDLKIV--DYKVVLTC-PGYVHKIDLK 253 (588)
T ss_dssp EEE-CC----------CSSCCCCEEEE--TTEEEEEC-SSEEEEEETT
T ss_pred eec-cc----------ccCcEEEEEEE--CCEEEEEe-CCeEEEEECC
Confidence 221 11 25679999999 68888887 6999999975
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.4e-24 Score=166.28 Aligned_cols=176 Identities=13% Similarity=0.075 Sum_probs=133.4
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC----------CCce------------e-eecccCcee
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ----------STAP------------C-VHGHKKAVS 57 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~------------~-~~~~~~~i~ 57 (179)
+.|++|+|||+.+++++..+.+...|++++|+|++..+++++. .++. . ..+|..+|.
T Consensus 76 s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~ 155 (902)
T 2oaj_A 76 NAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIV 155 (902)
T ss_dssp ETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCC
T ss_pred ECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeE
Confidence 4699999999999999998888899999999999965555542 2221 1 246888999
Q ss_pred EEEEeeC--CeEEEecCCCcEEEEecCCCcceeeecCC------------------CCCeEEEEEeeCCCEEEEeccCCc
Q 038439 58 YVKFLSN--DELASASTDSTLRLWDVKENLPVRTFRGH------------------MNEKNFVGLTVNSEYIACGSESNE 117 (179)
Q Consensus 58 ~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~~~~~d~~ 117 (179)
+++|+|+ +.+++++.|+.| +||+++++++..+..| ...|.+++|+|+|++|++++.|+.
T Consensus 156 sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe
Confidence 9999996 789999999999 9999999888777654 467999999999999999999999
Q ss_pred EEEEEcCCCccccccccC---CCCCC-CCccc--CCcceEEEEEEcc----CC-CeEEEEeCC-----CcEEEEee
Q 038439 118 VYVYHKEISKPVTWHRFS---SPDMD-DTDED--AGSYFISAVCWKS----DS-PTMLTANSQ-----GTIKVLVL 177 (179)
Q Consensus 118 v~vwd~~~~~~~~~~~~~---~~~~~-~~~~~--~~~~~i~~~~~~~----~~-~~l~~~~~d-----g~i~iwd~ 177 (179)
|++||+++++++....+. .+... ..... .+...|.+++|++ ++ ..|++|+.+ ..+.+|++
T Consensus 235 i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 235 LVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999998876532221 11000 00000 1255799999964 33 567777665 37888884
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.9e-25 Score=159.46 Aligned_cols=157 Identities=11% Similarity=0.107 Sum_probs=119.1
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe----CCCc--eeee-cccCceeEEEEeeC-CeEEEecC
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY----QSTA--PCVH-GHKKAVSYVKFLSN-DELASAST 72 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~--~~~~-~~~~~i~~~~~~~~-~~l~~~~~ 72 (179)
|.|++|+ |...++.+ -.|...|.+++|+|+| ..+ ...+ .++. .|...|.+++|+|+ ..|++++.
T Consensus 34 s~D~TV~--d~~~~~~l--~gh~~~v~~V~FsPdg----~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~ 105 (588)
T 2j04_A 34 FPDISIG--QPKYAKDI--NCNSKNLFHVKEFPLE----FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSN 105 (588)
T ss_dssp SSSEEEE--EECCCSCC--SSBGGGTEEEEEECCC----CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEET
T ss_pred cCCceee--ccccccee--cCCCccEEEEEECCCC----CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeC
Confidence 4678888 65555443 1478889999999988 122 1112 2222 56888999999999 89999999
Q ss_pred CCcEEEEecCCCcceeeecCCCC-----CeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcc-------ccccccCCCCCC
Q 038439 73 DSTLRLWDVKENLPVRTFRGHMN-----EKNFVGLTVNSEYIACGSESNEVYVYHKEISKP-------VTWHRFSSPDMD 140 (179)
Q Consensus 73 d~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~-------~~~~~~~~~~~~ 140 (179)
||.|++||... ++..+. |.. .+.+++|+|||++|++|+.||.|++||+.++.. +..+....
T Consensus 106 dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---- 178 (588)
T 2j04_A 106 NGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD---- 178 (588)
T ss_dssp TSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC----
T ss_pred CCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc----
Confidence 99999999654 566666 554 599999999999999999999999999998753 22221110
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.+ |...|.+++|+|+| +++++.|+.+++||+.
T Consensus 179 ---~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 179 ---AG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp ---TT-CCCCEEEEEEETTE--EEEEETTCCEEEECCC
T ss_pred ---cc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECC
Confidence 12 26789999999999 8889999999999975
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=8.6e-25 Score=155.05 Aligned_cols=177 Identities=12% Similarity=0.057 Sum_probs=115.0
Q ss_pred CCCccEEEEEcCCceeEEe-----e-cCCCceeEEEEcC--------CCCeEEEEe-----------CCCcee--eeccc
Q 038439 1 MAYGKVKVWCTRQEASVLN-----I-DMKANICCVKYNP--------GSSNYIAKY-----------QSTAPC--VHGHK 53 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~-----~-~~~~~v~~~~~~~--------~~~~~~~~~-----------~~~~~~--~~~~~ 53 (179)
+.|++|+|||..+++.... + .|.+.|++++|+| ++ ++++++ ..+.++ +..|.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~~~~~~ 186 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILAGYPLS 186 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEEEEECS
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeeeecCCC
Confidence 4699999999998765432 2 3889999999998 66 455555 233333 67788
Q ss_pred CceeEEEEeeC--CeEEEecCCCcEEEEecCCCcceee-------------------------ecCCCCCeEEEEEe-eC
Q 038439 54 KAVSYVKFLSN--DELASASTDSTLRLWDVKENLPVRT-------------------------FRGHMNEKNFVGLT-VN 105 (179)
Q Consensus 54 ~~i~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~-------------------------~~~~~~~v~~~~~~-~~ 105 (179)
.++.+++|+|+ .+|++++.|++|++||+++++.... ..+|...+.++.|+ |+
T Consensus 187 ~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d 266 (393)
T 4gq1_A 187 SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD 266 (393)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT
T ss_pred CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC
Confidence 99999999998 5899999999999999987653322 12456678889887 79
Q ss_pred CCEEEEeccCCcEEEEEcCCCccccccccCCCCCC-------CCcccCCcceEEEEEEcc--CCCeEEEEeCCCcEEEEe
Q 038439 106 SEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMD-------DTDEDAGSYFISAVCWKS--DSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 106 ~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd 176 (179)
++.+++++.|+.+++||+.+++....+........ ...... ........|+| ++.++++|+.||.|++||
T Consensus 267 g~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 267 GSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL-FPSLLGACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp TCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS-SCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc-cCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence 99999999999999999988765443321100000 000000 11112233444 444677788999999999
Q ss_pred ecC
Q 038439 177 LAA 179 (179)
Q Consensus 177 ~~~ 179 (179)
+.+
T Consensus 346 ~~~ 348 (393)
T 4gq1_A 346 TYE 348 (393)
T ss_dssp TTC
T ss_pred CCC
Confidence 753
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=7.8e-23 Score=146.19 Aligned_cols=164 Identities=10% Similarity=0.084 Sum_probs=134.0
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC------------------CCcee-eecccCceeEEEEe
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ------------------STAPC-VHGHKKAVSYVKFL 62 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~~~i~~~~~~ 62 (179)
.|+.|++||+.+++.+..+.....+.+++|+|++..+++++. .++.+ ...|...+.+++|+
T Consensus 232 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 311 (433)
T 3bws_A 232 ISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSG 311 (433)
T ss_dssp TTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEEC
T ss_pred CCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEEC
Confidence 589999999999999888888888999999999977766651 12222 33455678899999
Q ss_pred eC-C-eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc---------------CCcEEEEEcCC
Q 038439 63 SN-D-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE---------------SNEVYVYHKEI 125 (179)
Q Consensus 63 ~~-~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------------d~~v~vwd~~~ 125 (179)
|+ + .+++++.++.|++||+.+++.+..+. +...+.+++|+|+++++++++. ||.|++||+.+
T Consensus 312 ~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 312 NTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp SSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 99 5 45667899999999999988877775 5677899999999998888776 57999999999
Q ss_pred CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeecC
Q 038439 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLAA 179 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 179 (179)
++.+..+.. ...+..++|+|++++|++++. |+.|++|+++.
T Consensus 391 ~~~~~~~~~-------------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 391 DTVKEFWEA-------------GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TEEEEEEEC-------------SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CcEEEEecC-------------CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 887766543 446899999999999988875 99999999863
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=5.2e-22 Score=141.93 Aligned_cols=164 Identities=12% Similarity=0.052 Sum_probs=131.2
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-----------CCCcee-eecccCceeEEEEeeC-CeE
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-----------QSTAPC-VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~i~~~~~~~~-~~l 67 (179)
.|+.|++||+.+++.+..+. +...+.+++|+|++..+++++ ..++.+ ...+...+.+++|+|+ ..+
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKEL 268 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEE
T ss_pred CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEE
Confidence 57999999999998888876 778899999999998777766 233333 2223456899999999 788
Q ss_pred EEec--------CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEE-EEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 68 ASAS--------TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI-ACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 68 ~~~~--------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
++++ .|+.|++||+++++.+..+. +...+..++|+|+++.+ ++++.++.|++||+++++....+..
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---- 343 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV---- 343 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC----
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC----
Confidence 8877 58899999999887766653 45578899999999754 6668899999999998877665543
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeC---------------CCcEEEEeecC
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANS---------------QGTIKVLVLAA 179 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~ 179 (179)
...+.+++|+|+++++++++. ||.|++||+++
T Consensus 344 ---------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 344 ---------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp ---------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred ---------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 556889999999999988877 57999999753
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=1.2e-21 Score=139.94 Aligned_cols=162 Identities=15% Similarity=0.088 Sum_probs=123.9
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-------------CCCcee-eecccCceeEEEEeeC-CeEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-------------QSTAPC-VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~~i~~~~~~~~-~~l~ 68 (179)
++|++||+..........|...+.+++|+|+|+.++.++ .+++.. +..|...+.+++|+|+ ..|+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA 238 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEE
Confidence 799999998655544446888999999999997776665 223333 5667788999999999 6666
Q ss_pred -EecCCCc--EEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc-CC--cEEEEEcCCCccccccccCCCCCCCC
Q 038439 69 -SASTDST--LRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE-SN--EVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 69 -~~~~d~~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
+++.++. |++||+.+++. ..+..+...+.+++|+|+|++|++++. ++ .|.+||+.+++.... .. +
T Consensus 239 ~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l-~~--~----- 309 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRI-TW--E----- 309 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEEC-CC--S-----
T ss_pred EEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEE-ec--C-----
Confidence 6666654 99999988765 566677888999999999999887775 44 677889887764321 11 1
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeCC---CcEEEEeecC
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANSQ---GTIKVLVLAA 179 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~ 179 (179)
...+..++|+|+|++|++++.+ ..|++||+++
T Consensus 310 -----~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 310 -----GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp -----SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred -----CCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 4578899999999999988764 5899999753
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=7.9e-22 Score=135.43 Aligned_cols=165 Identities=10% Similarity=0.055 Sum_probs=121.9
Q ss_pred CccEEEEEcCCc---eeEEeec-CCCceeEEEEcCCCCeEEEEe---------------CC----Ccee-eecccCceeE
Q 038439 3 YGKVKVWCTRQE---ASVLNID-MKANICCVKYNPGSSNYIAKY---------------QS----TAPC-VHGHKKAVSY 58 (179)
Q Consensus 3 d~~i~vwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~~~---------------~~----~~~~-~~~~~~~i~~ 58 (179)
...|++|+..++ +++++.. +..+|..+.+.|+..+++.++ .. ++.+ ..+|...|..
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~ 141 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLG 141 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEe
Confidence 467999999988 7888887 566899999999877776665 11 2222 3345544544
Q ss_pred EEEeeCCeEEEec---CCCcEEEEecC-CCcceeeecCCCCCeEEEEEee---CCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 59 VKFLSNDELASAS---TDSTLRLWDVK-ENLPVRTFRGHMNEKNFVGLTV---NSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 59 ~~~~~~~~l~~~~---~d~~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
+ +++.++.++ .|+.|++|++. +++.+..+..|...+..++|+| ++..|++++.|++|++||+++++.+..
T Consensus 142 l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t 218 (356)
T 2w18_A 142 L---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK 218 (356)
T ss_dssp E---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred c---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE
Confidence 3 445555544 49999999994 4888888888999999999999 779999999999999999999998877
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeE------------EEEeCCCcEEEEeecC
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTM------------LTANSQGTIKVLVLAA 179 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~ 179 (179)
+..... +...+.+++|+|+|+++ ++|+.|++|++||..+
T Consensus 219 L~g~~~---------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 219 MHIDDS---------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp EECCC------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred EcCCCc---------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 652110 03367788999999876 5678899999999753
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=5.6e-22 Score=142.25 Aligned_cols=153 Identities=15% Similarity=0.133 Sum_probs=114.6
Q ss_pred ecCCCceeEEEEcCCCCeEEE---Ee-----------CCC--------ce---e--eecccCceeEEEEeeC--CeEEEe
Q 038439 20 IDMKANICCVKYNPGSSNYIA---KY-----------QST--------AP---C--VHGHKKAVSYVKFLSN--DELASA 70 (179)
Q Consensus 20 ~~~~~~v~~~~~~~~~~~~~~---~~-----------~~~--------~~---~--~~~~~~~i~~~~~~~~--~~l~~~ 70 (179)
+.+...|.+++|+|+++.+++ ++ ... ++ + +.+|...|.+++|+|+ .+|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 446678999999999966664 44 111 11 2 5679999999999997 789999
Q ss_pred cCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcce
Q 038439 71 STDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYF 150 (179)
Q Consensus 71 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (179)
+.|++|++||++++..+.....|...+.+++|+|+|++|++|+.||.|++||++ ++....+..... ....|...
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~-----~~~~~~~~ 242 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF-----YESDHPVR 242 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT-----CCTTSCEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc-----cCCCCcee
Confidence 999999999999887666666788899999999999999999999999999998 444333221100 00111458
Q ss_pred EEEEEEccCCCeEEE-EeCCC------cEEEEeec
Q 038439 151 ISAVCWKSDSPTMLT-ANSQG------TIKVLVLA 178 (179)
Q Consensus 151 i~~~~~~~~~~~l~~-~~~dg------~i~iwd~~ 178 (179)
+.+++|++++.++++ .+.+| .+++|+++
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 999999998887754 33343 38899975
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=4.9e-21 Score=136.74 Aligned_cols=160 Identities=8% Similarity=0.092 Sum_probs=124.2
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-------------CCCcee-eecccCceeEEEEeeC-CeEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-------------QSTAPC-VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~~i~~~~~~~~-~~l~ 68 (179)
..|++||+.+++......+...+.+++|+|+|+.++.++ ..++.. +..|...+.+++|+|+ ..|+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEE
T ss_pred cEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEE
Confidence 489999999998876666888999999999997777454 222233 5667788999999999 7787
Q ss_pred EecC-CC--cEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC---CcEEEEEcCCCccccccccCCCCCCCC
Q 038439 69 SAST-DS--TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES---NEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 69 ~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
+++. ++ .|.+||+.+++. ..+..+...+..++|+|+|++|++++.+ ..|.+||+.+++.... ..
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l-~~-------- 352 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-SS-------- 352 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC-CC--------
T ss_pred EEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe-cC--------
Confidence 7775 44 677789887764 4455566778899999999999888764 5899999998776322 11
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeCCC---cEEEEeec
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANSQG---TIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~ 178 (179)
...+..++|+|+|++|++++.++ .|++||+.
T Consensus 353 -----~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 353 -----TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp -----SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred -----CCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 22688899999999999988877 79999864
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=2.5e-22 Score=144.06 Aligned_cols=143 Identities=12% Similarity=0.115 Sum_probs=111.6
Q ss_pred CceeEEEEcCCCCeEEEEeCCCcee--------------------------eecccCceeEEEEeeC-CeEE----EecC
Q 038439 24 ANICCVKYNPGSSNYIAKYQSTAPC--------------------------VHGHKKAVSYVKFLSN-DELA----SAST 72 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~i~~~~~~~~-~~l~----~~~~ 72 (179)
..+..+++++++..+++++..+-.+ ...+...|.+++|+|+ .+|+ +++.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 4588999999886665555211110 1123456999999999 8888 7899
Q ss_pred CCcEEEEecCCC--------cc---eeeecCCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcCCCccccccccCCCCCC
Q 038439 73 DSTLRLWDVKEN--------LP---VRTFRGHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 73 d~~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
|+.|++||+.+. +. +..+.+|...|.+++|+|+ +.+|++++.||.|++||++++.......
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~------- 189 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL------- 189 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-------
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-------
Confidence 999999998654 22 3455668889999999998 8899999999999999999875442221
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
. |...|.+++|+|+|++|++|+.||.|++||++
T Consensus 190 ----~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 190 ----P-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ----C-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ----C-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 1 16689999999999999999999999999975
No 129
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.87 E-value=1.8e-20 Score=128.72 Aligned_cols=139 Identities=19% Similarity=0.295 Sum_probs=114.9
Q ss_pred eeEEEEcCCCCeEEEEe----------CCCcee----eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeee
Q 038439 26 ICCVKYNPGSSNYIAKY----------QSTAPC----VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTF 90 (179)
Q Consensus 26 v~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~ 90 (179)
.+.|+||+++ ++++| .+++.+ ..+|...|++++|+|+ +++++|+.|+.|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~--~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS--EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC--EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5779999885 66666 455554 4578889999999999 99999999999999999999999999
Q ss_pred cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC
Q 038439 91 RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG 170 (179)
Q Consensus 91 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 170 (179)
..|...+.+ +++++..+++++.++.+++|+.......... ... |...+..+.+.++++++++++.|+
T Consensus 106 ~~h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 106 TSHSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVAT-LSG----------HSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp ECCSSCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEE-EEC----------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCccceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEE-EcC----------ccCceEEEEEcCCCCEEEEEecCc
Confidence 998887755 4556789999999999999998876543222 111 166799999999999999999999
Q ss_pred cEEEEeecC
Q 038439 171 TIKVLVLAA 179 (179)
Q Consensus 171 ~i~iwd~~~ 179 (179)
.|++||+++
T Consensus 173 ~i~iwd~~~ 181 (318)
T 4ggc_A 173 LVNVWPSAP 181 (318)
T ss_dssp CEEEEESSC
T ss_pred ceeEEECCC
Confidence 999999863
No 130
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=2.6e-20 Score=133.06 Aligned_cols=138 Identities=18% Similarity=0.293 Sum_probs=115.2
Q ss_pred eeEEEEcCCCCeEEEEe----------CCCcee----eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeee
Q 038439 26 ICCVKYNPGSSNYIAKY----------QSTAPC----VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTF 90 (179)
Q Consensus 26 v~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~ 90 (179)
++.|+|++++ ++++| .+++.+ +.+|...|++++|+|+ .+|++|+.|+.|++||+.+++.+..+
T Consensus 108 ~~~l~wS~~n--~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSGN--VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTTS--EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEECCCC--EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 5679999764 67777 445544 4578889999999999 99999999999999999999999999
Q ss_pred cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC
Q 038439 91 RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG 170 (179)
Q Consensus 91 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 170 (179)
.+|...+.++++ ++.++++|+.|+.+++||.+....... .+.. |...+..+.|+|+++++++++.|+
T Consensus 186 ~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~-~~~~----------h~~~~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 186 TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVA-TLSG----------HSQEVCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE-EEEC----------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeE-Eecc----------cccceeeeeecCCCCeeeeeeccc
Confidence 999998887766 578999999999999999987544322 1211 267899999999999999999999
Q ss_pred cEEEEeec
Q 038439 171 TIKVLVLA 178 (179)
Q Consensus 171 ~i~iwd~~ 178 (179)
.+++|++.
T Consensus 253 ~v~i~~~~ 260 (420)
T 4gga_A 253 LVNVWPSA 260 (420)
T ss_dssp CEEEEESS
T ss_pred cceEEeec
Confidence 99999975
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.1e-19 Score=123.22 Aligned_cols=163 Identities=8% Similarity=0.086 Sum_probs=118.8
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CC-Ccee--eecc-cCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QS-TAPC--VHGH-KKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~-~~~~--~~~~-~~~i~~~~~~~~-~~ 66 (179)
+.|++|++||+.+++......+...|.+++|+|++..+++.+ .. ++.. ...+ ...+.+++|+|+ ..
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 468999999999998887778899999999999997666554 33 3333 3344 367889999999 88
Q ss_pred EEEec--CCCcEEEEe--cCCCcceeeecCCCCCeEEEEEeeCCCEEE-EeccCCcEEEEEcCC--CccccccccCCCCC
Q 038439 67 LASAS--TDSTLRLWD--VKENLPVRTFRGHMNEKNFVGLTVNSEYIA-CGSESNEVYVYHKEI--SKPVTWHRFSSPDM 139 (179)
Q Consensus 67 l~~~~--~d~~v~iwd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~~--~~~~~~~~~~~~~~ 139 (179)
+++++ .++..++|. ...++ ...+..+ ..+..++|+|++++++ ++..++.+++|++.. ++.. .+. .+
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~--~~-- 171 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET-RLT--HG-- 171 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE-ECC--CS--
T ss_pred EEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce-Ecc--cC--
Confidence 88888 334555554 44444 3444433 3488899999999877 777899999998643 3322 111 11
Q ss_pred CCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 140 DDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
...+.+++|+|++++|+.++ .++.+++|++.
T Consensus 172 --------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 172 --------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp --------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred --------CCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 55789999999999888766 58999999874
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=3.9e-19 Score=123.73 Aligned_cols=169 Identities=7% Similarity=-0.021 Sum_probs=131.3
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccC---------ceeEEE
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKK---------AVSYVK 60 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~---------~i~~~~ 60 (179)
++.|.+||..+++.+..+.....+..++|+|+++.++++. .+++.+ +..+.. .+.++.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 7899999999999988888777789999999997677665 233333 222221 267899
Q ss_pred EeeC-CeEEEec--CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCC
Q 038439 61 FLSN-DELASAS--TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSP 137 (179)
Q Consensus 61 ~~~~-~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~ 137 (179)
|+|+ +.+++++ .++.|.+||..+++.+..+..+...+..++|+|+++++++++.++.|.+||+.+++..........
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 227 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD 227 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC
Confidence 9999 7666655 478899999999988888775555678899999999999999999999999999887766554211
Q ss_pred CCCCCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeecC
Q 038439 138 DMDDTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLAA 179 (179)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 179 (179)
. +...+..++|+|+++++++++. ++.|.+||+++
T Consensus 228 -------~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 228 -------G-KEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp -------S-SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred -------C-CCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 0 1446888999999998777665 48999999753
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=4.7e-19 Score=122.43 Aligned_cols=161 Identities=8% Similarity=0.020 Sum_probs=118.7
Q ss_pred CCccEEEEEcCCceeEEeecCCC------ceeEEEEcCCCCeEEEEe----------------------CCCcee-eecc
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA------NICCVKYNPGSSNYIAKY----------------------QSTAPC-VHGH 52 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~----------------------~~~~~~-~~~~ 52 (179)
.++.|.+||+.+++.+..+.... .+..++|+|+++.++++. ..++.+ ....
T Consensus 54 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 133 (337)
T 1pby_B 54 KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133 (337)
T ss_dssp TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC
Confidence 46789999999998887776443 688999999997777662 112222 1112
Q ss_pred cCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCC-------------------------------------
Q 038439 53 KKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHM------------------------------------- 94 (179)
Q Consensus 53 ~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~------------------------------------- 94 (179)
...+.++.|+|+ .+++++ ++.|.+||+.+++.+..+..+.
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP 211 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccc
Confidence 345678889999 767776 5789999998776554332211
Q ss_pred -----------------------------CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCccc
Q 038439 95 -----------------------------NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDED 145 (179)
Q Consensus 95 -----------------------------~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 145 (179)
..+..++|+|++++++++ ++.|.+||+.+++.+..+..
T Consensus 212 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~----------- 278 (337)
T 1pby_B 212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL----------- 278 (337)
T ss_dssp TSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-----------
T ss_pred ccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-----------
Confidence 123458999999998887 78999999998877665543
Q ss_pred CCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 146 AGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 146 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...+.+++|+|++++|++++.++.|.+||+++
T Consensus 279 --~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 279 --PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp --SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred --CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 33567899999999999999999999999863
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=4.3e-19 Score=122.90 Aligned_cols=166 Identities=7% Similarity=0.080 Sum_probs=117.4
Q ss_pred CCccEEEEEcC-Cc--eeEEeecCCCceeEEEEcCCCCeEEEEeCC-------------Cce--e--eecccCceeEEEE
Q 038439 2 AYGKVKVWCTR-QE--ASVLNIDMKANICCVKYNPGSSNYIAKYQS-------------TAP--C--VHGHKKAVSYVKF 61 (179)
Q Consensus 2 ~d~~i~vwd~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------~~~--~--~~~~~~~i~~~~~ 61 (179)
.|+.|++||+. ++ +.+..+.+...+.+++|+|+++.+++++.. ++. + +..+ ..+..++|
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 91 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHIST 91 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEE
Confidence 58999999985 33 455566788889999999999777776621 111 1 2222 36788999
Q ss_pred eeC-CeEEEec-CCCcEEEEecC---CCcceeeecCCCCCeEEEEEeeCCCEEEEec-cCCcEEEEEcCC-Ccccccc--
Q 038439 62 LSN-DELASAS-TDSTLRLWDVK---ENLPVRTFRGHMNEKNFVGLTVNSEYIACGS-ESNEVYVYHKEI-SKPVTWH-- 132 (179)
Q Consensus 62 ~~~-~~l~~~~-~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~vwd~~~-~~~~~~~-- 132 (179)
+|+ ..+++++ .++.|.+||+. ..+.+..+.. ...+..++|+|+++++++++ .++.|.+||+.+ ++.....
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 999 7665554 58899999994 3344444443 34578899999999888776 889999999987 5432211
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
..... ....+..++|+|+++++++++ .++.|.+|+++
T Consensus 171 ~~~~~---------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 171 EVTTV---------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEECS---------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred ccccC---------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 11110 044678899999999776555 78999999974
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=1.8e-18 Score=120.31 Aligned_cols=164 Identities=10% Similarity=0.010 Sum_probs=125.5
Q ss_pred CCccEEEEEcCCceeEEeecCCC----------ceeEEEEcCCCCeEEEEe------------CCCcee--eecccCcee
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA----------NICCVKYNPGSSNYIAKY------------QSTAPC--VHGHKKAVS 57 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~------------~~~~~~--~~~~~~~i~ 57 (179)
.++.|.+||..+++.+..+.... .+.+++|+|+++.+++++ .+++.+ +..+...+.
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 46899999999999888776422 278999999997777665 222233 333455578
Q ss_pred EEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecC----CCCCeEEEEEeeCCCEEEEecc-CCcEEEEEcCCCccccc
Q 038439 58 YVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRG----HMNEKNFVGLTVNSEYIACGSE-SNEVYVYHKEISKPVTW 131 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~-d~~v~vwd~~~~~~~~~ 131 (179)
.+.|+|+ +.+++++.++.+.+||..+++.+..+.. +...+..++|+|+++++++++. ++.|.+||+.+++.+..
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 8999999 8888889999999999999888776654 4456778999999997766654 59999999999887766
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeecC
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 179 (179)
.... . ...++|+|++++++++. .++.|.+||+++
T Consensus 269 ~~~~------------~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 269 VAAP------------E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EECS------------S--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEcC------------C--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 5532 1 14589999999766655 689999999753
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=9.7e-19 Score=118.53 Aligned_cols=165 Identities=5% Similarity=-0.015 Sum_probs=118.8
Q ss_pred CCccEEEEEcCC-ceeEEeecC--CCceeEEEEcCCCCeEEEEeCC---Ccee--e---------ecccCceeEEEEeeC
Q 038439 2 AYGKVKVWCTRQ-EASVLNIDM--KANICCVKYNPGSSNYIAKYQS---TAPC--V---------HGHKKAVSYVKFLSN 64 (179)
Q Consensus 2 ~d~~i~vwd~~~-~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~---~~~~--~---------~~~~~~i~~~~~~~~ 64 (179)
.++.|.+||+.+ ++....... ...+.+++|+|+++.+++++.. ...+ + ..+...+..++|+|+
T Consensus 60 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd 139 (297)
T 2ojh_A 60 SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD 139 (297)
T ss_dssp ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTT
T ss_pred cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCC
Confidence 367899999998 777665542 3678999999999766666511 1111 1 112234788899999
Q ss_pred -CeEE-EecCCCcEEEEecCC-CcceeeecCCCCCeEEEEEeeCCCEEEEec-cCCcEEEEEcC-CCccccccccCCCCC
Q 038439 65 -DELA-SASTDSTLRLWDVKE-NLPVRTFRGHMNEKNFVGLTVNSEYIACGS-ESNEVYVYHKE-ISKPVTWHRFSSPDM 139 (179)
Q Consensus 65 -~~l~-~~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~vwd~~-~~~~~~~~~~~~~~~ 139 (179)
..++ +++.++.+++|++.. ......+..+...+.+++|+|++++++.++ .++.+.+|++. .+.....+.. +
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~--~-- 215 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD--S-- 215 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC--C--
T ss_pred CCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec--C--
Confidence 6665 778899999998642 334456666778899999999999877665 58899999986 3333332221 1
Q ss_pred CCCcccCCcceEEEEEEccCCCeEEEEeCC-----------CcEEEEeec
Q 038439 140 DDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----------GTIKVLVLA 178 (179)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~ 178 (179)
...+..++|+|++++|++++.+ +.|++||++
T Consensus 216 --------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 216 --------AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp --------SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred --------CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 5578899999999999888876 569999975
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=2.3e-18 Score=119.06 Aligned_cols=168 Identities=10% Similarity=0.060 Sum_probs=119.4
Q ss_pred CCccEEEEEcCCceeEEeecC-CCceeEEEEcCCCCeEEEEe-----------CCCce-e--eecccCceeEEEEeeC-C
Q 038439 2 AYGKVKVWCTRQEASVLNIDM-KANICCVKYNPGSSNYIAKY-----------QSTAP-C--VHGHKKAVSYVKFLSN-D 65 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~-----------~~~~~-~--~~~~~~~i~~~~~~~~-~ 65 (179)
.++.|.+||..+++.+..+.. ...+ .++|+|+++.+++++ ..++. . +..+..+..+++|+|+ +
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred CCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence 578999999999998877763 4456 999999997677766 23333 2 4444455555999999 7
Q ss_pred eEEEecCCC---cEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEe-ccCCc-EEEEEcCCCccccccccCCCCCC
Q 038439 66 ELASASTDS---TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACG-SESNE-VYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 66 ~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~-v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
+++++..++ .|.+||+.+++.+..+.. ......++|+|+|++++++ ..++. +.+|++.....+........
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~--- 172 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI--- 172 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE---
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc---
Confidence 777555553 899999999888877764 3456899999999866554 55588 99999986443221110000
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeecC
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 179 (179)
.. ...+..++|+|+|+++++++ .++.|.+||+++
T Consensus 173 ----~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 173 ----SG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp ----CS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ----cC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 00 34578999999999665554 688999999863
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=2.4e-18 Score=126.60 Aligned_cols=166 Identities=10% Similarity=0.060 Sum_probs=126.2
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC------------CCcee--eecccCceeEEEEee----
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ------------STAPC--VHGHKKAVSYVKFLS---- 63 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~i~~~~~~~---- 63 (179)
.|++|.+||..+++++.++.....+..++|+|+|+.+++++. +.+.+ +. +......++|+|
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGY 235 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTC
T ss_pred CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCC
Confidence 578999999999999999885445999999999977777762 22233 33 344568999999
Q ss_pred C-CeEEEec-CCCcEEEEecCCCcceeeecCC-----------CCCeEEEEEeeCCCE-EEEeccCCcEEEEEcCCCccc
Q 038439 64 N-DELASAS-TDSTLRLWDVKENLPVRTFRGH-----------MNEKNFVGLTVNSEY-IACGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 64 ~-~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~-~~~~~~d~~v~vwd~~~~~~~ 129 (179)
+ +++++++ .++.|.+||..+.+++..+..+ ...+..+.++|++.. +++...++.|.+||+.+.+.+
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 8 8888877 4899999999999888877542 236788999997655 567778999999999887654
Q ss_pred cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeecC
Q 038439 130 TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 179 (179)
...... . ...+..+.|+|+++++++++ .+++|.+||+.+
T Consensus 316 ~~~~i~-~----------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 316 TVTSIG-A----------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp EEEEEE-C----------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred eeEEec-c----------CcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 422221 1 34567889999999876654 589999999764
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=2.7e-18 Score=118.61 Aligned_cols=173 Identities=12% Similarity=0.064 Sum_probs=124.6
Q ss_pred CCccEEEEEcCCceeEEeecCCC---ceeEEEEcCCCCeEEEEe-----------CCCcee--ee-cc----cCceeEEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA---NICCVKYNPGSSNYIAKY-----------QSTAPC--VH-GH----KKAVSYVK 60 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~-~~----~~~i~~~~ 60 (179)
.|++|.+||..+++.+..+.... .+..++|+|+++.+++++ .+++.+ +. .+ ...+..++
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 58999999999999988887665 689999999997776665 223333 22 11 22567899
Q ss_pred EeeC-CeEEEec------------CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc
Q 038439 61 FLSN-DELASAS------------TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 61 ~~~~-~~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
|+|+ +.+++++ .++.|.+||+.+++.+..+.. ...+..++|+|++++++++ ++.|.+||+.+++
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 9999 7887775 579999999998887777764 4457789999999988887 6889999999887
Q ss_pred cccccccCCCCCCCC---------c---------------------------------------------ccCCcceEEE
Q 038439 128 PVTWHRFSSPDMDDT---------D---------------------------------------------EDAGSYFISA 153 (179)
Q Consensus 128 ~~~~~~~~~~~~~~~---------~---------------------------------------------~~~~~~~i~~ 153 (179)
....+.......... . ...+...+..
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 245 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFS 245 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEE
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceee
Confidence 654333221000000 0 0001124567
Q ss_pred EEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 154 VCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 154 ~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
++|+|++++++++ ++.|.+||+++
T Consensus 246 ~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 246 TAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp EEECTTSSEEEEE--ESEEEEEETTT
T ss_pred EEECCCCCEEEEe--CCeEEEEECCC
Confidence 9999999999888 78999999753
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=5.9e-19 Score=133.51 Aligned_cols=171 Identities=11% Similarity=0.100 Sum_probs=120.8
Q ss_pred CCCccEEEEEcCCceeEEeecCCC----ceeEEEEcCCCCeEEEEeCC-------------------Ccee----eeccc
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKA----NICCVKYNPGSSNYIAKYQS-------------------TAPC----VHGHK 53 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~-------------------~~~~----~~~~~ 53 (179)
+.||+|++||+.+++....+.+.. .|.+++|||||+.++++... ++.. ..+|.
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc
Confidence 468999999999998877776433 49999999999776666421 1111 11233
Q ss_pred CceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCe------------------EEEEEeeCCCEEEEecc
Q 038439 54 KAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEK------------------NFVGLTVNSEYIACGSE 114 (179)
Q Consensus 54 ~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~~~~~ 114 (179)
..+..++|+|+ ..|++++. +.|++||+.+++.......+...+ ..++|+|||++|++++.
T Consensus 114 ~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 34788999999 78888876 799999999887765554433323 78999999999998875
Q ss_pred CC----------------------------------cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCC
Q 038439 115 SN----------------------------------EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDS 160 (179)
Q Consensus 115 d~----------------------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 160 (179)
++ .|++||+.+++....+.... .. ..+...+..++|+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~-~~~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD-----DP-RMREYYITMVKWATST 266 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC-----CG-GGSSEEEEEEEESSSS
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc-----cC-CCccceeEEEEEeCCC
Confidence 43 78899998876433322110 00 0114578999999999
Q ss_pred CeEEEEeC----CCcEEEEeec
Q 038439 161 PTMLTANS----QGTIKVLVLA 178 (179)
Q Consensus 161 ~~l~~~~~----dg~i~iwd~~ 178 (179)
+++++... +..|++||+.
T Consensus 267 ~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 267 KVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp EEEEEEEETTSCEEEEEEEETT
T ss_pred eEEEEEEcCCCCeEEEEEEeCC
Confidence 98877653 3579999875
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=3.2e-18 Score=125.94 Aligned_cols=173 Identities=10% Similarity=0.056 Sum_probs=125.9
Q ss_pred CCccEEEEEcCCceeEE--eecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eec----ccCceeEEEEe
Q 038439 2 AYGKVKVWCTRQEASVL--NIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHG----HKKAVSYVKFL 62 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~----~~~~i~~~~~~ 62 (179)
.+++|.+||+.+.+.+. .+.+...+..+.|+|+|+.+++++ .+++.+ +.. |......+ ++
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 57899999998866544 566777899999999998777765 334444 332 44333333 46
Q ss_pred eC--CeEEEec-CCCcEEEEecCC-------CcceeeecCCCCCeEEEEEeeCCCEEEEec-------cCCcEEEEEcCC
Q 038439 63 SN--DELASAS-TDSTLRLWDVKE-------NLPVRTFRGHMNEKNFVGLTVNSEYIACGS-------ESNEVYVYHKEI 125 (179)
Q Consensus 63 ~~--~~l~~~~-~d~~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------~d~~v~vwd~~~ 125 (179)
|+ ..++++. .|++|.+||..+ .+.++++..+...+..++++|++++|++++ .++.|.+||+.+
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 76 4556665 589999999988 788899998888888999999999999987 267999999999
Q ss_pred Cccc-cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-----CCCcEEEEeecC
Q 038439 126 SKPV-TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-----SQGTIKVLVLAA 179 (179)
Q Consensus 126 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iwd~~~ 179 (179)
++.. ..+...... .... +...+..+.|+|+|+.++++. .++.|.|||.++
T Consensus 459 ~~~~~~~~~v~~~~---~~~~-~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 459 LDAKYQVLPIAEWA---DLGE-GAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp TTSCCEEECHHHHH---CCCS-SCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCCCeEEeechhhc---ccCC-CCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 8765 322111000 0001 156799999999999998763 479999999764
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=6.1e-19 Score=133.20 Aligned_cols=164 Identities=10% Similarity=0.060 Sum_probs=116.1
Q ss_pred CCccEEEEEcCCcee--EEeecCC-----------------CceeEEEEcCCCCeEEEEe---------CCCcee-eecc
Q 038439 2 AYGKVKVWCTRQEAS--VLNIDMK-----------------ANICCVKYNPGSSNYIAKY---------QSTAPC-VHGH 52 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~--~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~---------~~~~~~-~~~~ 52 (179)
.|+ | +||+.+++. ...+.+. ..|.+++|+|+ ..++++. .+++.. +..+
T Consensus 43 ~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~ 119 (706)
T 2z3z_A 43 GDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDT 119 (706)
T ss_dssp TTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECC
T ss_pred CCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCC
Confidence 356 8 999999877 3334332 56999999999 5666655 334444 5566
Q ss_pred cCceeEEEEeeC-CeEEEecCCCcEEEEecCC-----CcceeeecCCCCC--------------eEEEEEeeCCCEEEEe
Q 038439 53 KKAVSYVKFLSN-DELASASTDSTLRLWDVKE-----NLPVRTFRGHMNE--------------KNFVGLTVNSEYIACG 112 (179)
Q Consensus 53 ~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~~~ 112 (179)
...+.+++|+|+ ..|+++ .++.|++||+.+ ++.......+... +..+.|+|||++|+++
T Consensus 120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 777889999999 777774 679999999988 7665544333332 4789999999999988
Q ss_pred c---------------------------------cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC
Q 038439 113 S---------------------------------ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD 159 (179)
Q Consensus 113 ~---------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 159 (179)
+ .+..|++||+.+++......... +...+..++|+||
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spd 268 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP----------KEKFLTNLSWSPD 268 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC----------TTCEEEEEEECTT
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC----------CceeEeeEEEECC
Confidence 7 34679999999877543322111 1567999999999
Q ss_pred CCeEEEEeCCC-----cEEEEeecC
Q 038439 160 SPTMLTANSQG-----TIKVLVLAA 179 (179)
Q Consensus 160 ~~~l~~~~~dg-----~i~iwd~~~ 179 (179)
|+.|++++.++ .|++||+++
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCC
Confidence 99999887765 899999753
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=1.9e-18 Score=131.18 Aligned_cols=162 Identities=10% Similarity=0.072 Sum_probs=119.6
Q ss_pred cEEEEEcCCceeEEeecCC-------------------------CceeEEEEcCCCCeEEEEe---------CCC---ce
Q 038439 5 KVKVWCTRQEASVLNIDMK-------------------------ANICCVKYNPGSSNYIAKY---------QST---AP 47 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~~~~-------------------------~~v~~~~~~~~~~~~~~~~---------~~~---~~ 47 (179)
+|++||+.+++....+... ..+.+++|+|+|+.+++++ ..+ +.
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~ 144 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV 144 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSC
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeCCcEEEEECCCCCcceE
Confidence 8999999998876666421 2388999999997776665 233 33
Q ss_pred e-eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCC----------------eEEEEEeeCCCEE
Q 038439 48 C-VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNE----------------KNFVGLTVNSEYI 109 (179)
Q Consensus 48 ~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~~ 109 (179)
. +..|...+..++|+|+ +.|++++ ++.|++||+.+++.......+... +..++|+|||++|
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l 223 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI 223 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence 3 6667788999999999 7788777 468999999987765444333322 4679999999999
Q ss_pred EEeccCC---------------------------------cEEEEEcCC-CccccccccCCCCCCCCcccCCcceEEEEE
Q 038439 110 ACGSESN---------------------------------EVYVYHKEI-SKPVTWHRFSSPDMDDTDEDAGSYFISAVC 155 (179)
Q Consensus 110 ~~~~~d~---------------------------------~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 155 (179)
++++.|+ .|.+||+.+ ++........ .+...+..++
T Consensus 224 ~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~ 293 (741)
T 2ecf_A 224 AYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGK----------EQDIYLARVN 293 (741)
T ss_dssp EEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCS----------CSSEEEEEEE
T ss_pred EEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCC----------CcceEEEEEE
Confidence 9887665 788899988 7654322110 1166899999
Q ss_pred EccCCCeEEEEeC-----CCcEEEEeec
Q 038439 156 WKSDSPTMLTANS-----QGTIKVLVLA 178 (179)
Q Consensus 156 ~~~~~~~l~~~~~-----dg~i~iwd~~ 178 (179)
| |||++|++++. +..|++||++
T Consensus 294 ~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 294 W-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp E-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred e-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 9 99999987654 5679999875
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=1.3e-17 Score=115.81 Aligned_cols=160 Identities=10% Similarity=0.037 Sum_probs=117.0
Q ss_pred CCccEEEEEcCCceeEEeecCC-------CceeEEEEcCCCCeEEEEeCC------------Ccee-e------------
Q 038439 2 AYGKVKVWCTRQEASVLNIDMK-------ANICCVKYNPGSSNYIAKYQS------------TAPC-V------------ 49 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~------------~~~~-~------------ 49 (179)
.++.|.+||+.+++.+..+... ..+..++|+|+|+.++++... .... +
T Consensus 63 ~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 142 (349)
T 1jmx_B 63 HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 142 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee
Confidence 4789999999999888777632 238899999999776666521 1111 1
Q ss_pred -ecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCC---------------------------------
Q 038439 50 -HGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHM--------------------------------- 94 (179)
Q Consensus 50 -~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~--------------------------------- 94 (179)
..+...+.+++|+|+ . +++++. .|.+||+.+++.+..+..+.
T Consensus 143 ~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 219 (349)
T ss_dssp EEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred eccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec
Confidence 112335778889999 6 665543 49999999887666554321
Q ss_pred -----------------------------------CCeEEEEEee-CCCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 95 -----------------------------------NEKNFVGLTV-NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 95 -----------------------------------~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
..+..++|+| ++++++++ ++.|.+||+.+++.+.....
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---- 293 (349)
T 1jmx_B 220 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL---- 293 (349)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC----
T ss_pred CCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC----
Confidence 1234567789 99998888 88999999999887665543
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
...+..++|+|++++|++++.++.|.+||+++
T Consensus 294 ---------~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 294 ---------DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ---------SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ---------CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 33467899999999999988899999999863
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.78 E-value=2.8e-18 Score=129.64 Aligned_cols=170 Identities=7% Similarity=0.028 Sum_probs=122.5
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CC-----Ccee--eecccCc----------
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QS-----TAPC--VHGHKKA---------- 55 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~-----~~~~--~~~~~~~---------- 55 (179)
.|++|++||+.+++......+...+.+++|+|+|+.++.+. .. ++.. ...+...
T Consensus 99 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 35889999999998777677778899999999997666654 23 3333 2222222
Q ss_pred ----eeEEEEeeC-CeEEEec---------------------------------CCCcEEEEecCCCcceeeec--CCCC
Q 038439 56 ----VSYVKFLSN-DELASAS---------------------------------TDSTLRLWDVKENLPVRTFR--GHMN 95 (179)
Q Consensus 56 ----i~~~~~~~~-~~l~~~~---------------------------------~d~~v~iwd~~~~~~~~~~~--~~~~ 95 (179)
+.++.|+|+ ..|++++ .+..|.+||+.+++...... .+..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 478999999 8888887 44679999999877544332 3556
Q ss_pred CeEEEEEeeCCCEEEEeccCC-----cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEcc--CCCeEEEEeC
Q 038439 96 EKNFVGLTVNSEYIACGSESN-----EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS--DSPTMLTANS 168 (179)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~d~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~ 168 (179)
.+..++|+|||++|++++.++ .|.+||+.+++........... .. ...+..++|+| +|++++++..
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~------~~-~~~~~~~~~sp~~dg~~l~~~~~ 331 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK------HY-VEPLHPLTFLPGSNNQFIWQSRR 331 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS------SC-CCCCSCCEECTTCSSEEEEEECT
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC------Ce-ECccCCceeecCCCCEEEEEEcc
Confidence 789999999999999887765 8999999988333222111000 00 11235689999 9999999999
Q ss_pred CCcEEEEeec
Q 038439 169 QGTIKVLVLA 178 (179)
Q Consensus 169 dg~i~iwd~~ 178 (179)
|+.++||.+.
T Consensus 332 ~g~~~l~~~~ 341 (706)
T 2z3z_A 332 DGWNHLYLYD 341 (706)
T ss_dssp TSSCEEEEEE
T ss_pred CCccEEEEEE
Confidence 9999999764
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=3.5e-17 Score=113.28 Aligned_cols=164 Identities=12% Similarity=0.088 Sum_probs=112.0
Q ss_pred CCccEEEEEc---CCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CC-Ccee-e-----e-cccCceeEE
Q 038439 2 AYGKVKVWCT---RQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QS-TAPC-V-----H-GHKKAVSYV 59 (179)
Q Consensus 2 ~d~~i~vwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~-~~~~-~-----~-~~~~~i~~~ 59 (179)
.++.|.+||+ .+.+.+..+.....+.+++|+|+++.+++++ .. ++.. . . .....+..+
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 4788999999 4455666666667799999999997777665 11 2111 0 1 123367789
Q ss_pred EEeeC-CeEE-EecCCCcEEEEecCC--Ccc--eeeec---CC---CCCeEEEEEeeCCCEEE-EeccCCcEEEEEcCC-
Q 038439 60 KFLSN-DELA-SASTDSTLRLWDVKE--NLP--VRTFR---GH---MNEKNFVGLTVNSEYIA-CGSESNEVYVYHKEI- 125 (179)
Q Consensus 60 ~~~~~-~~l~-~~~~d~~v~iwd~~~--~~~--~~~~~---~~---~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~~- 125 (179)
+|+|+ .+++ ++..++.+.+||+.. ++. ...+. .. ...+..++|+|++++++ ++..++.|.+||+..
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~ 263 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED 263 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC
Confidence 99999 6554 555889999999953 332 22222 11 23566899999998876 555789999999983
Q ss_pred -Cc--cccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 126 -SK--PVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 126 -~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
+. .+..... ...+..++|+|++++|++++ .++.+.+|++.
T Consensus 264 ~~~~~~~~~~~~-------------~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 264 GSVLSKEGFQPT-------------ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SCCEEEEEEEEC-------------SSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCceEEeeeecC-------------CCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 22 2222221 22377899999999888887 58999999653
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=2.3e-17 Score=114.52 Aligned_cols=128 Identities=9% Similarity=0.075 Sum_probs=93.1
Q ss_pred CCccEEEEEcCCceeEEeecCCC--ceeEEEEcCCCCeEEEEe-----------CCCcee--eec-c-----cCceeEEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA--NICCVKYNPGSSNYIAKY-----------QSTAPC--VHG-H-----KKAVSYVK 60 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~-~-----~~~i~~~~ 60 (179)
.|++|++||..+++.+..+.... .+..++|+|+++.+++++ .+++.+ +.. + ...+..++
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 57899999999999888887555 789999999997666665 223333 221 1 22377899
Q ss_pred EeeC-CeEEEecCC------------CcEEEEecCCCcc---eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcC
Q 038439 61 FLSN-DELASASTD------------STLRLWDVKENLP---VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKE 124 (179)
Q Consensus 61 ~~~~-~~l~~~~~d------------~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~ 124 (179)
|+|+ +++++++.+ +.|.+||+.+++. +..+.. ...+.+++|+|+|+ +++++. .|.+||+.
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~ 174 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVK 174 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCC
Confidence 9999 788888755 8999999987443 333333 34578899999999 555543 49999999
Q ss_pred CCccccccc
Q 038439 125 ISKPVTWHR 133 (179)
Q Consensus 125 ~~~~~~~~~ 133 (179)
+++....+.
T Consensus 175 ~~~~~~~~~ 183 (349)
T 1jmx_B 175 TGKYTVALP 183 (349)
T ss_dssp TCCEEEEEC
T ss_pred CCceecccc
Confidence 887665443
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=5.7e-17 Score=112.04 Aligned_cols=165 Identities=9% Similarity=0.028 Sum_probs=113.8
Q ss_pred CCccEEEEEcCCcee-EEeecCCCceeE-EEEcCCCCeEEEEeCCCc--ee------------eecccCceeEEEEeeC-
Q 038439 2 AYGKVKVWCTRQEAS-VLNIDMKANICC-VKYNPGSSNYIAKYQSTA--PC------------VHGHKKAVSYVKFLSN- 64 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~-~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~i~~~~~~~~- 64 (179)
.++.|.+||..+++. ...+........ ++|+|+++.+++....+. .+ .........+++|+|+
T Consensus 60 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg 139 (331)
T 3u4y_A 60 FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNG 139 (331)
T ss_dssp TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTS
T ss_pred CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCC
Confidence 367999999999887 666664444455 999999976663322211 22 1112344688999999
Q ss_pred CeEE-EecCCCc-EEEEecCCCccee----eecCCCCCeEEEEEeeCCCEEE-EeccCCcEEEEEcCCCcc---cccccc
Q 038439 65 DELA-SASTDST-LRLWDVKENLPVR----TFRGHMNEKNFVGLTVNSEYIA-CGSESNEVYVYHKEISKP---VTWHRF 134 (179)
Q Consensus 65 ~~l~-~~~~d~~-v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~~~~~---~~~~~~ 134 (179)
++++ +...++. +.+|++.....+. ........+..++|+|+|++++ ++..++.|.+||+.+++. +..+..
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 5454 4456688 9999987643321 1112345578999999999655 455689999999998887 444432
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeecC
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 179 (179)
...+..++|+|+|+++++++ .++.|.+||+++
T Consensus 220 -------------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 220 -------------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp -------------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred -------------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 34567899999999776665 477899999753
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=3e-17 Score=128.86 Aligned_cols=161 Identities=12% Similarity=-0.013 Sum_probs=126.0
Q ss_pred CccEEEEEcCCceeEEeecCCC-ceeEEEEcCCCCeEEEEeC-----------CCcee-eecccCceeEEEEeeC-CeEE
Q 038439 3 YGKVKVWCTRQEASVLNIDMKA-NICCVKYNPGSSNYIAKYQ-----------STAPC-VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~i~~~~~~~~-~~l~ 68 (179)
++.|.+|+..+++......+.. .+..++|+ +|+.++.++. .++.. +.+|...+..++|+|+ ..|+
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la 394 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAV 394 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEE
T ss_pred cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEE
Confidence 5678999988877655445666 89999999 8866655441 22222 4467788999999999 8999
Q ss_pred EecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCC----------cEEEEEcCCCccccccccCCCC
Q 038439 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESN----------EVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----------~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+++.++.|++||+.+++....+..|...+..++|+|||++|++++.++ .|++||+.+++.. .+. .+
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~-~l~--~~- 470 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF-AAT--TE- 470 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE-ECS--CS-
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEE-Eee--CC-
Confidence 999999999999999887777767888889999999999998877654 8999999987632 221 11
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...+..++|+|+|++|++++.++...+|+.
T Consensus 471 ---------~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 471 ---------NSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ---------SSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ---------CcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 456788999999999999998887777763
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=5.9e-17 Score=120.08 Aligned_cols=158 Identities=9% Similarity=-0.001 Sum_probs=112.1
Q ss_pred CccEEEEEcCCceeEEeecCC-CceeEEEEcCCCCeEEEEeCC---Cc--ee--ee----c------ccCceeEEEEeeC
Q 038439 3 YGKVKVWCTRQEASVLNIDMK-ANICCVKYNPGSSNYIAKYQS---TA--PC--VH----G------HKKAVSYVKFLSN 64 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~---~~--~~--~~----~------~~~~i~~~~~~~~ 64 (179)
||+++||++.+++..+...+. ..+.+++|+|+ .+++++.. .. .+ +. + ....+...+|+|+
T Consensus 43 ~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~d 120 (582)
T 3o4h_A 43 EGSVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDT 120 (582)
T ss_dssp TTEEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCSBEEEEEEEC
T ss_pred CCceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCCCCceeeeeCCC
Confidence 899999999877766655665 58999999998 45554321 11 11 11 1 1123446688888
Q ss_pred --CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC----CcEEEEEcCCCccccccccCCCC
Q 038439 65 --DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES----NEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 65 --~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
..+++.+.++.+.+||+.+++....... .. .+++|+|||+++++++.+ +.|++||+.+++...... +
T Consensus 121 g~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~---~- 193 (582)
T 3o4h_A 121 GEAVVFTGATEDRVALYALDGGGLRELARL-PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS---G- 193 (582)
T ss_dssp SSCEEEEEECSSCEEEEEEETTEEEEEEEE-SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC---S-
T ss_pred CCeEEEEecCCCCceEEEccCCcEEEeecC-CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec---C-
Confidence 4445545555566999998865544433 22 789999999999988776 789999999887643211 1
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCC--cEEEEeec
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQG--TIKVLVLA 178 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~ 178 (179)
...+..++|+|||+.|+++..++ .|++||++
T Consensus 194 ---------~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 194 ---------EGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp ---------SCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred ---------CCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 55689999999999999888888 89999875
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=2.2e-17 Score=129.64 Aligned_cols=161 Identities=11% Similarity=0.116 Sum_probs=123.2
Q ss_pred CccEEEEEcCCceeEEeecC------------CCceeEEEEc-CCCCeEEEEe---------CCCcee-eecccC-ceeE
Q 038439 3 YGKVKVWCTRQEASVLNIDM------------KANICCVKYN-PGSSNYIAKY---------QSTAPC-VHGHKK-AVSY 58 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~------------~~~v~~~~~~-~~~~~~~~~~---------~~~~~~-~~~~~~-~i~~ 58 (179)
|+.|.+||....+ +..+.. ...+.+++|+ |+|..++++. ..++.. +..|.. .+..
T Consensus 264 ~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1045)
T 1k32_A 264 GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVR 342 (1045)
T ss_dssp TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEE
T ss_pred CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEe
Confidence 6789999985443 334432 2368999999 9997666665 222333 556666 8899
Q ss_pred EEEeeC-CeEEEecCCCcEE-EEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCC
Q 038439 59 VKFLSN-DELASASTDSTLR-LWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSS 136 (179)
Q Consensus 59 ~~~~~~-~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~ 136 (179)
++|+ + ..+++++.+..+. +||+..++.. .+..+...+..++|+|||++|++++.++.|++||+.+++.......
T Consensus 343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~-- 418 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-- 418 (1045)
T ss_dssp ECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred eeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC--
Confidence 9999 9 7888888888888 8998876544 4446778899999999999999999999999999998876554321
Q ss_pred CCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC----------cEEEEeec
Q 038439 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG----------TIKVLVLA 178 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----------~i~iwd~~ 178 (179)
+ ...+..++|+|||++|++++.++ .|++||+.
T Consensus 419 ~----------~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 419 R----------EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp S----------SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred C----------CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 1 55678899999999998887654 89999975
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.75 E-value=2.2e-17 Score=125.37 Aligned_cols=166 Identities=10% Similarity=0.010 Sum_probs=117.6
Q ss_pred ccEEEEEcCCc---eeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee--eecccCc--------------
Q 038439 4 GKVKVWCTRQE---ASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGHKKA-------------- 55 (179)
Q Consensus 4 ~~i~vwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~-------------- 55 (179)
+.|.+||+.++ +......+...+..++|+|+|+.++.+. ..++.. ...+...
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHS
T ss_pred CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccceeccccceeeeecc
Confidence 67999999988 5544445778899999999997666554 222222 1222221
Q ss_pred --eeEEEEeeC-CeEEEecCCC---------------------------------cEEEEecCC-Ccceeeec--CCCCC
Q 038439 56 --VSYVKFLSN-DELASASTDS---------------------------------TLRLWDVKE-NLPVRTFR--GHMNE 96 (179)
Q Consensus 56 --i~~~~~~~~-~~l~~~~~d~---------------------------------~v~iwd~~~-~~~~~~~~--~~~~~ 96 (179)
+..+.|+|+ ..|++++.|+ .|.+||+.+ ++...... .+...
T Consensus 209 ~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 288 (741)
T 2ecf_A 209 DRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIY 288 (741)
T ss_dssp CCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEE
T ss_pred ccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceE
Confidence 477999999 8888887665 788999988 76544332 35667
Q ss_pred eEEEEEeeCCCEEEEecc-----CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCc
Q 038439 97 KNFVGLTVNSEYIACGSE-----SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGT 171 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~~-----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 171 (179)
+..++| |||++|++++. +..|++||+.+++........... . -..+..++|+|||+++++++.||.
T Consensus 289 ~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-------~-~~~~~~~~~spdg~~~~~~~~~g~ 359 (741)
T 2ecf_A 289 LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT-------W-VPLHNSLRFLDDGSILWSSERTGF 359 (741)
T ss_dssp EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS-------C-CCCCSCCEECTTSCEEEEECTTSS
T ss_pred EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC-------c-CCcCCceEECCCCeEEEEecCCCc
Confidence 899999 99999887654 567999999998765544321100 0 003457899999999999999998
Q ss_pred EEEEeec
Q 038439 172 IKVLVLA 178 (179)
Q Consensus 172 i~iwd~~ 178 (179)
++||.+.
T Consensus 360 ~~l~~~~ 366 (741)
T 2ecf_A 360 QHLYRID 366 (741)
T ss_dssp CEEEEEC
T ss_pred cEEEEEc
Confidence 8888654
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=3.8e-16 Score=108.69 Aligned_cols=167 Identities=11% Similarity=0.073 Sum_probs=111.2
Q ss_pred CCccEEEEEcC--CceeE--EeecCCCceeEEEEcCCCCeEEEEeC-------------CCc--ee--eecccCceeEEE
Q 038439 2 AYGKVKVWCTR--QEASV--LNIDMKANICCVKYNPGSSNYIAKYQ-------------STA--PC--VHGHKKAVSYVK 60 (179)
Q Consensus 2 ~d~~i~vwd~~--~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~-------------~~~--~~--~~~~~~~i~~~~ 60 (179)
.++.|.+|++. +++.. ....+...+..++|+|+|+ +++++. .++ .+ +..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 35567777654 45543 2344667788999999996 666542 111 11 234566788899
Q ss_pred EeeC-CeEEEec-CCCcEEEEecCC-Cc--ceeeecCC---------CCCeEEEEEeeCCCEEEEeccCCcEEEEEcC-C
Q 038439 61 FLSN-DELASAS-TDSTLRLWDVKE-NL--PVRTFRGH---------MNEKNFVGLTVNSEYIACGSESNEVYVYHKE-I 125 (179)
Q Consensus 61 ~~~~-~~l~~~~-~d~~v~iwd~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~-~ 125 (179)
|+|+ ++|++++ .++.+.+|++.. +. .+..+... ...+.+++|+|+|+++++...++.|.+||+. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 9999 7777776 688999999963 22 22333211 1247789999999966677778999999998 4
Q ss_pred CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE-EeCCCcEEEEeec
Q 038439 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT-ANSQGTIKVLVLA 178 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~ 178 (179)
++.......... ....+..++|+|+|+++++ ...++.+.+|++.
T Consensus 173 g~~~~~~~~~~~---------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 173 GQLSEQSVLTME---------AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp SCEEEEEEEECC---------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CcEEEeeeEEcC---------CCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 443222111111 0335778999999996666 5568899999875
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=3.6e-16 Score=109.41 Aligned_cols=166 Identities=11% Similarity=0.161 Sum_probs=109.3
Q ss_pred CCccEEEEEcCCceeEEee----cC-----------CCceeEEEEcCCCCeEEEEeCCCce-------------------
Q 038439 2 AYGKVKVWCTRQEASVLNI----DM-----------KANICCVKYNPGSSNYIAKYQSTAP------------------- 47 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~----~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~------------------- 47 (179)
.+++|.+|++.....+..+ .+ ...+.+++|+|+|+.++++......
T Consensus 118 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 118 SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence 4789999998754322211 11 2235889999999777776511111
Q ss_pred ------e-eecccCceeEEEEeeC-CeEEEec-CCCcEEEEecCCCcc--eeeec---CCCCCeEEEEEeeCCCEEEEec
Q 038439 48 ------C-VHGHKKAVSYVKFLSN-DELASAS-TDSTLRLWDVKENLP--VRTFR---GHMNEKNFVGLTVNSEYIACGS 113 (179)
Q Consensus 48 ------~-~~~~~~~i~~~~~~~~-~~l~~~~-~d~~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~~~~~ 113 (179)
. ...+......++|+|+ +++++++ .++.|.+||+.+++. +..+. .+......++|+|+|++++++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 198 TKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred ecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 1 1122345678999999 6666665 689999999987643 22222 2234567999999999987666
Q ss_pred c--CCcEEEEEcC--CCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 114 E--SNEVYVYHKE--ISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 114 ~--d~~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
. ++.|.+|++. +++......... ...+..++|+|+|++|++++ .++.|.+|++.
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~~~-----------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQLT-----------GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEEEC-----------SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEecC-----------CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 5 4899999996 344222211110 23467899999999988887 57899997653
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.6e-17 Score=123.30 Aligned_cols=170 Identities=13% Similarity=0.181 Sum_probs=113.6
Q ss_pred CCccEEEEEcCCceeEEeecCCC----ceeEEEEcCCCCeEEEEeCC--------Ccee--e----------ecccCcee
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA----NICCVKYNPGSSNYIAKYQS--------TAPC--V----------HGHKKAVS 57 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~--------~~~~--~----------~~~~~~i~ 57 (179)
.|++|++||+.+++....+.+.. .+.+++|||||+.++.+... ...+ . ......+.
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~ 113 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQ 113 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBC
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccc
Confidence 58899999999998877776433 39999999999766655421 1122 1 11224578
Q ss_pred EEEEeeC-CeEEEecCCCcEEEEecCCCcceeee-cCCCCCe-----------------EEEEEeeCCCEEEEeccCC--
Q 038439 58 YVKFLSN-DELASASTDSTLRLWDVKENLPVRTF-RGHMNEK-----------------NFVGLTVNSEYIACGSESN-- 116 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~~~~~d~-- 116 (179)
.++|+|+ +.|+.++ ++.|++||+.+++..+.. .++...+ ..++|+|||++|++++.|.
T Consensus 114 ~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 114 YLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp CEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred cceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 8999999 7888775 789999999887765432 2222212 4799999999999887652
Q ss_pred --------------------------------cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEE
Q 038439 117 --------------------------------EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTML 164 (179)
Q Consensus 117 --------------------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 164 (179)
.|++||+.+++......+..+ ..... +...+..++|+||++.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP---AMIAS-SDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC---HHHHT-SCEEEEEEEESSSSEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCC---ccCCC-CcceEEEeEEeCCCeEEE
Confidence 788999988764311111100 00001 166789999999988777
Q ss_pred EEeCC----CcEEEEe
Q 038439 165 TANSQ----GTIKVLV 176 (179)
Q Consensus 165 ~~~~d----g~i~iwd 176 (179)
+.... ..|.+||
T Consensus 269 ~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 269 QWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEESSTTEEEEEEEE
T ss_pred EEeccccCeEEEEEEc
Confidence 64432 2488888
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=1.7e-15 Score=105.48 Aligned_cols=173 Identities=9% Similarity=0.076 Sum_probs=112.6
Q ss_pred CCccEEEEEcCCcee--EEee-cCCCceeEEEEcCCCCeEEEEeCC-C-----------c--ee--eec---------cc
Q 038439 2 AYGKVKVWCTRQEAS--VLNI-DMKANICCVKYNPGSSNYIAKYQS-T-----------A--PC--VHG---------HK 53 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~-~-----------~--~~--~~~---------~~ 53 (179)
.++.|.+|++.+++. +..+ .+...+..++|+|+|+.+++++.. + . .+ +.. +.
T Consensus 61 ~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 61 DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 368999999977653 3332 356788999999999777776511 1 1 11 111 11
Q ss_pred CceeEEEEeeC-CeEEEecCCCcEEEEecC-CCccee--eecC-CCCCeEEEEEeeCCCEEEE-eccCCcEEEEEcCC--
Q 038439 54 KAVSYVKFLSN-DELASASTDSTLRLWDVK-ENLPVR--TFRG-HMNEKNFVGLTVNSEYIAC-GSESNEVYVYHKEI-- 125 (179)
Q Consensus 54 ~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~~~~-~~~d~~v~vwd~~~-- 125 (179)
..+.+++|+|+ ..+++...++.|++|++. +++... .+.. ....+..++|+|+|+++++ ...++.|.+|++..
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 23778999999 766666678899999998 444322 2222 2336788999999996655 56688999999874
Q ss_pred CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEE-EEeCCCcEEEEeec
Q 038439 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTML-TANSQGTIKVLVLA 178 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~ 178 (179)
++............. ......+..++|+|+|++|+ +...++.|.+|++.
T Consensus 221 g~~~~~~~~~~~~~~----~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 221 GAFTQLGIVKTIPAD----YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TEEEEEEEEESSCTT----CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CceEEeeeeeecCCC----CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 432211111111000 00024688999999999875 45568999999985
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=1.1e-16 Score=118.57 Aligned_cols=154 Identities=9% Similarity=-0.058 Sum_probs=117.3
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe--------------CCCcee-eecccCceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY--------------QSTAPC-VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~i~~~~~~~~-~~ 66 (179)
++.+.+||+.+++......+.. .+++|+|||+.++.++ .+++.. +..|...+..++|+|| ..
T Consensus 131 ~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 131 EDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp SSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCE
T ss_pred CCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCE
Confidence 3445599999887766555444 8999999997666554 123333 6677788899999999 88
Q ss_pred EEEecCCC--cEEEEecCCCcceeeecCCCCCeEEEE--------EeeCCCEEEEeccCCcEEEEEcCCCccccccccCC
Q 038439 67 LASASTDS--TLRLWDVKENLPVRTFRGHMNEKNFVG--------LTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSS 136 (179)
Q Consensus 67 l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~ 136 (179)
|+++..++ .|++||+.+++.. .+..+...+..++ |+|||.++++++.++.+++|++ ++... ..
T Consensus 209 l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~-- 281 (582)
T 3o4h_A 209 TAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--AP-- 281 (582)
T ss_dssp EEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CC--
T ss_pred EEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cC--
Confidence 88888888 8999999988776 6666766666666 9999988899999999999999 54432 11
Q ss_pred CCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCc---EEEEee
Q 038439 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGT---IKVLVL 177 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~iwd~ 177 (179)
...+.+++|+ +++++++++.+.. +.+||+
T Consensus 282 -----------~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 282 -----------QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp -----------SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred -----------CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 4468899999 9999888887644 666654
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=1e-16 Score=121.38 Aligned_cols=162 Identities=13% Similarity=0.086 Sum_probs=111.6
Q ss_pred CccEEEEEcCCceeEEeec----CCCceeEEEEcCCCCeEEEEe---------CCCcee--eecccCce-----------
Q 038439 3 YGKVKVWCTRQEASVLNID----MKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGHKKAV----------- 56 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~i----------- 56 (179)
++.|.+||+.+++. ..+. +...+..++|||+|+.++.+. ..++.. ...+...+
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 58899999998876 3332 333489999999997776665 223333 22333323
Q ss_pred -------eEEEEeeC-CeEEEecCCC----------------------------------cEEEEecCCCcceeeecCC-
Q 038439 57 -------SYVKFLSN-DELASASTDS----------------------------------TLRLWDVKENLPVRTFRGH- 93 (179)
Q Consensus 57 -------~~~~~~~~-~~l~~~~~d~----------------------------------~v~iwd~~~~~~~~~~~~~- 93 (179)
.++.|+|+ +.|++++.++ .|++||+.+++....+..+
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence 78999999 8888877543 7999999988765666543
Q ss_pred -----CCCeEEEEEeeCCCEEEEecc----CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceE----EEEEEccCC
Q 038439 94 -----MNEKNFVGLTVNSEYIACGSE----SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFI----SAVCWKSDS 160 (179)
Q Consensus 94 -----~~~v~~~~~~~~~~~~~~~~~----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~ 160 (179)
...+..++|+|||+++++... +..|++||+.+++......... ...+ ..++|+|||
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES-----------EAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC-----------SSCCCCCCCCCEECTTS
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc-----------CCEEeccCCCceEcCCC
Confidence 456889999999998876643 3579999999887654432110 1122 367899999
Q ss_pred CeEEE--EeCCC------cEEEEe
Q 038439 161 PTMLT--ANSQG------TIKVLV 176 (179)
Q Consensus 161 ~~l~~--~~~dg------~i~iwd 176 (179)
+.|+. +..++ .|.+||
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CeEEEEEecccCCCcceeEEEEEe
Confidence 98775 44566 466666
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=3.4e-15 Score=104.84 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=110.8
Q ss_pred CCccEEEEEcC-CceeEEeec-----CCCceeEEEEcCCCCeEEEEe-----------C-CCcee----ee--cccCcee
Q 038439 2 AYGKVKVWCTR-QEASVLNID-----MKANICCVKYNPGSSNYIAKY-----------Q-STAPC----VH--GHKKAVS 57 (179)
Q Consensus 2 ~d~~i~vwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~-----------~-~~~~~----~~--~~~~~i~ 57 (179)
.+|++.+|++. +++....+. +...+.+++|+|+|+.++++. . .++.. +. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 47899999997 465543332 456799999999997666654 2 23222 11 1345678
Q ss_pred EEEEeeC-CeEEEec-CCCcEEEEecC--CCcce---eeec---C----CCC------CeEEEE-EeeCCCEEEEeccC-
Q 038439 58 YVKFLSN-DELASAS-TDSTLRLWDVK--ENLPV---RTFR---G----HMN------EKNFVG-LTVNSEYIACGSES- 115 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~-~d~~v~iwd~~--~~~~~---~~~~---~----~~~------~v~~~~-~~~~~~~~~~~~~d- 115 (179)
.++|+|+ +++++++ .++.|.+|++. +++.. ..+. . +.. .+..++ |+|||++++++..+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999 7777665 47899999865 45432 1221 1 121 478899 99999998876543
Q ss_pred C-----cEEEEEcC-CCccccccc-cCCCCCCCCcccCCcceEEEEEEcc---CCCeEEEEeCC-CcEEEEeec
Q 038439 116 N-----EVYVYHKE-ISKPVTWHR-FSSPDMDDTDEDAGSYFISAVCWKS---DSPTMLTANSQ-GTIKVLVLA 178 (179)
Q Consensus 116 ~-----~v~vwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d-g~i~iwd~~ 178 (179)
+ .|.+|++. +++...... .... ...+..++|+| +|++|++++.+ +.|.+|++.
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~----------~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTP----------TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECS----------SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecC----------CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 2 89999996 454332111 1100 22345688999 89999998874 899999875
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=3.1e-15 Score=113.86 Aligned_cols=172 Identities=11% Similarity=0.139 Sum_probs=111.3
Q ss_pred CccEEEEEcCCceeEEeecCCC------ceeEEEEcCCCCeEEEEeC-------------------CCcee-eecccCce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKA------NICCVKYNPGSSNYIAKYQ-------------------STAPC-VHGHKKAV 56 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~~-------------------~~~~~-~~~~~~~i 56 (179)
|++|++||+.++++...+.... ....++|||||+.++.... +++.. +..|...+
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~ 114 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNT 114 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTE
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcc
Confidence 7899999999998776665221 2345899999976666551 22222 55667789
Q ss_pred eEEEEeeC-CeEEEecCCCcEEEEecCCCcceee-ecCCCCCe-----------------EEEEEeeCCCEEEEeccCC-
Q 038439 57 SYVKFLSN-DELASASTDSTLRLWDVKENLPVRT-FRGHMNEK-----------------NFVGLTVNSEYIACGSESN- 116 (179)
Q Consensus 57 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v-----------------~~~~~~~~~~~~~~~~~d~- 116 (179)
...+|||| ..|+.++ ++.|.+||+.+++..+. ..++...+ ..+.|+|||++|+.++.|.
T Consensus 115 ~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 115 QWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp EEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred eeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence 99999999 7787774 68999999988765432 22222222 3489999999998775332
Q ss_pred -----------------------------------cEEEEEcCC---CccccccccCCCCCCCCcccCCcceEEEEEEcc
Q 038439 117 -----------------------------------EVYVYHKEI---SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS 158 (179)
Q Consensus 117 -----------------------------------~v~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 158 (179)
.|++||+.+ ++.+....+..+. .... +...+..++|+|
T Consensus 194 ~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~---~~~~-~~~~~~~~~wsp 269 (740)
T 4a5s_A 194 EVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA---SMLI-GDHYLCDVTWAT 269 (740)
T ss_dssp TCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH---HHHT-SCEEEEEEEEEE
T ss_pred CCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc---cCCC-CCeEEEEEEEeC
Confidence 366677776 5321111111100 0000 266789999999
Q ss_pred CCCeEEEEeC----CCcEEEEeecC
Q 038439 159 DSPTMLTANS----QGTIKVLVLAA 179 (179)
Q Consensus 159 ~~~~l~~~~~----dg~i~iwd~~~ 179 (179)
||+.++.... +..|.+||+.+
T Consensus 270 dg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 270 QERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp TTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CCeEEEEEeCCCCCEEEEEEEECCC
Confidence 9996665433 33699999753
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=1.6e-13 Score=93.10 Aligned_cols=161 Identities=11% Similarity=0.115 Sum_probs=114.6
Q ss_pred CccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEe----------CCCcee--ee--cccCceeEEEEeeC-C
Q 038439 3 YGKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKY----------QSTAPC--VH--GHKKAVSYVKFLSN-D 65 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~--~~~~~i~~~~~~~~-~ 65 (179)
++.|.+|| .+++.+..+. ....+.+++++|++. ++++. ..++.+ +. .+...+..++++|+ .
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 67889999 5666666664 345789999999995 55553 122222 21 34456789999999 6
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCC--CCCeEEEEEeeCCCEEEEeccCC-cEEEEEcCCCccccccccCCCCCCCC
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGH--MNEKNFVGLTVNSEYIACGSESN-EVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d~-~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
.+++.+.++.|++||.. ++.+..+... ...+..++++++|+++++...++ .|.+||.. ++.+..+.....
T Consensus 177 l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~----- 249 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVK----- 249 (286)
T ss_dssp EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSC-----
T ss_pred EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCC-----
Confidence 66777778999999974 5556666433 35688999999999888887776 99999964 554444432111
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...+..++++|+|+++++ +.++.|++|++.
T Consensus 250 -----~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 250 -----HAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp -----CSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred -----CCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 234788999999986666 679999999874
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.65 E-value=2.6e-13 Score=94.90 Aligned_cols=167 Identities=7% Similarity=0.062 Sum_probs=106.6
Q ss_pred CccEEEEEcCC--cee--EEeec-CCCceeEEEEcCCCCeEEEEeCCCcee----ee------------cc---------
Q 038439 3 YGKVKVWCTRQ--EAS--VLNID-MKANICCVKYNPGSSNYIAKYQSTAPC----VH------------GH--------- 52 (179)
Q Consensus 3 d~~i~vwd~~~--~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~------------~~--------- 52 (179)
++.|.+|++.. ++. +.... +...+..+++ +++.++++......+ +. .+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 151 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKER 151 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccc
Confidence 47999998765 433 33333 4556777888 776666665111111 10 01
Q ss_pred --cCceeEEEEeeC-CeEEE-ecCCCcEEEEecCCCcc------e-------eeecCCCCCeEEEEEeeCCCEEEEec-c
Q 038439 53 --KKAVSYVKFLSN-DELAS-ASTDSTLRLWDVKENLP------V-------RTFRGHMNEKNFVGLTVNSEYIACGS-E 114 (179)
Q Consensus 53 --~~~i~~~~~~~~-~~l~~-~~~d~~v~iwd~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~-~ 114 (179)
...+.+++|+|+ +++++ ...++.|++|++..... + .........+..++|+|+|+++++++ .
T Consensus 152 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 152 QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 122477999999 65554 44588999999875431 1 11123345678999999999887766 6
Q ss_pred CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC--CcEEEEeec
Q 038439 115 SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ--GTIKVLVLA 178 (179)
Q Consensus 115 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~ 178 (179)
++.|.+||+.+++........... . +...+..++|+|+|++|+++..+ +.|.+|++.
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~------~-~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADT------V-NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCS------S-CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCeEEEEEecCCceEEeEEEecCC------C-CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 899999999876542222111110 0 13446899999999998776664 899999984
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=1.9e-15 Score=114.45 Aligned_cols=165 Identities=10% Similarity=0.057 Sum_probs=107.5
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee---eecccCce--------------
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC---VHGHKKAV-------------- 56 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~i-------------- 56 (179)
|+.|++||+.+++.+........+..++|||||+.++.+. ..++.. ..++...|
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence 6899999999988732222346789999999997766654 122222 12222212
Q ss_pred ---eEEEEeeC-CeEEEecCCC----------------------------------cEEEEecCCCcce--------eee
Q 038439 57 ---SYVKFLSN-DELASASTDS----------------------------------TLRLWDVKENLPV--------RTF 90 (179)
Q Consensus 57 ---~~~~~~~~-~~l~~~~~d~----------------------------------~v~iwd~~~~~~~--------~~~ 90 (179)
.++.|+|| ..|++++.|. .|++||+.+++.. ..+
T Consensus 169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence 48999999 8888877552 7889999887643 123
Q ss_pred cCCCCCeEEEEEeeCCCEEEEeccC----CcEEEEE----cCCCccccccc--cCCCCCCCCcccCCcceEE-----EEE
Q 038439 91 RGHMNEKNFVGLTVNSEYIACGSES----NEVYVYH----KEISKPVTWHR--FSSPDMDDTDEDAGSYFIS-----AVC 155 (179)
Q Consensus 91 ~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~vwd----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~-----~~~ 155 (179)
..+...+..++|+||++++++.... ..|.+|| +.+++...... ...+ ...+. .+.
T Consensus 249 ~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 318 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR----------TGWAGGFFVSTPV 318 (719)
T ss_dssp HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS----------SSCSSSSSCCCCE
T ss_pred CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccC----------CceEccccCCccE
Confidence 3567778999999998777764432 2488899 77776554431 0011 22333 678
Q ss_pred EccCCCeEEE--EeCCCc--EEEEee
Q 038439 156 WKSDSPTMLT--ANSQGT--IKVLVL 177 (179)
Q Consensus 156 ~~~~~~~l~~--~~~dg~--i~iwd~ 177 (179)
|+|+|+.++. ...+|. |.+||+
T Consensus 319 ~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 319 FSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp ECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred ECCCCCeEEEEEEccCCceEEEEEEC
Confidence 9999996654 445664 555554
No 164
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=5e-14 Score=95.38 Aligned_cols=162 Identities=9% Similarity=0.058 Sum_probs=121.3
Q ss_pred CCCccEEEEEcCCceeEEeecCC--CceeEEEEcCCCCeEEEEe--------CCCcee--eecc-cCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMK--ANICCVKYNPGSSNYIAKY--------QSTAPC--VHGH-KKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~--------~~~~~~--~~~~-~~~i~~~~~~~~-~~ 66 (179)
+.|+.|.+||.++++.+..+... ..+.++.+.|+|+ ++++. .+++.+ +..+ ...+.++.+.++ +.
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNA 90 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCE
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCE
Confidence 46899999999999999888754 4789999999995 44454 345555 4443 346788889999 78
Q ss_pred EEEecC-CCcEEEEecCCCcceeeecC------CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCC
Q 038439 67 LASAST-DSTLRLWDVKENLPVRTFRG------HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDM 139 (179)
Q Consensus 67 l~~~~~-d~~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~ 139 (179)
+++.+. ++.+..+|. +++.+..+.. +......+++.++|+++++...++.|.+||.. ++.+..+...
T Consensus 91 lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~---- 164 (276)
T 3no2_A 91 LVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS---- 164 (276)
T ss_dssp EEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS----
T ss_pred EEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC----
Confidence 887776 777777775 5776666542 11234556788999999999999999999998 8887766542
Q ss_pred CCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 140 DDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
..+..+...++++.++++..+++|..+|..
T Consensus 165 ---------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 165 ---------GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp ---------SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred ---------CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 234456678899999988888889888865
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=2.7e-14 Score=107.26 Aligned_cols=163 Identities=10% Similarity=0.031 Sum_probs=110.9
Q ss_pred CCccEEEEEcCCceeEEee-cCCCcee---------EEEEc--CCCCe-EEEEe---------C-C----Ccee-eec--
Q 038439 2 AYGKVKVWCTRQEASVLNI-DMKANIC---------CVKYN--PGSSN-YIAKY---------Q-S----TAPC-VHG-- 51 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~-~~~~~v~---------~~~~~--~~~~~-~~~~~---------~-~----~~~~-~~~-- 51 (179)
.++...||....+.....+ .+...+. ...|+ |||+. ++.+. + . ++.. +..
T Consensus 45 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~ 124 (662)
T 3azo_A 45 EAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVS 124 (662)
T ss_dssp TTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCC
T ss_pred cCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCc
Confidence 4678899985433333333 3545555 66666 99977 55554 1 1 2222 333
Q ss_pred ---ccCceeEEEEeeC-CeEEEecCC----------CcEEEEecCC------Ccceeeec-CCCCCeEEEEEeeCCCEEE
Q 038439 52 ---HKKAVSYVKFLSN-DELASASTD----------STLRLWDVKE------NLPVRTFR-GHMNEKNFVGLTVNSEYIA 110 (179)
Q Consensus 52 ---~~~~i~~~~~~~~-~~l~~~~~d----------~~v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 110 (179)
|...+..++|+|+ +.|++++.+ ..|++||+.+ ++ ...+. .+...+..++|+|||++|+
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEE
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEE
Confidence 5567889999999 888888776 5899999987 44 34454 5556677889999999998
Q ss_pred EeccC--------CcEEEEEcC-CC---ccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC--cEEEEe
Q 038439 111 CGSES--------NEVYVYHKE-IS---KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG--TIKVLV 176 (179)
Q Consensus 111 ~~~~d--------~~v~vwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd 176 (179)
.++.+ ..|++||+. ++ +....... +...+..+.|+|||++++++..++ .|.+||
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------------~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------------PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------------TTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------------CCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 77754 379999998 46 22222111 145688999999999888888888 455555
Q ss_pred e
Q 038439 177 L 177 (179)
Q Consensus 177 ~ 177 (179)
+
T Consensus 272 ~ 272 (662)
T 3azo_A 272 P 272 (662)
T ss_dssp T
T ss_pred C
Confidence 4
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.62 E-value=6.8e-14 Score=98.22 Aligned_cols=167 Identities=11% Similarity=0.047 Sum_probs=107.5
Q ss_pred ccEEEEEc--CCceeEE--eec--CCCceeEEEEcCCCCeEEEEeC----------CCcee-eeccc--CceeEEEEeeC
Q 038439 4 GKVKVWCT--RQEASVL--NID--MKANICCVKYNPGSSNYIAKYQ----------STAPC-VHGHK--KAVSYVKFLSN 64 (179)
Q Consensus 4 ~~i~vwd~--~~~~~~~--~~~--~~~~v~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~--~~i~~~~~~~~ 64 (179)
+.|.+|++ .+++... ... ....+..++|+|+++.++++.. .++.. ...+. +....++|+|+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spd 93 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTN 93 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSC
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCC
Confidence 46777764 4555422 222 3347889999999976666542 22222 11111 22445778888
Q ss_pred -Ce--EEEec-------------CCCcEEEEecC-CCcceeeec----CCCCCeEEEEEeeCCCEEEEec-cCCcEEEEE
Q 038439 65 -DE--LASAS-------------TDSTLRLWDVK-ENLPVRTFR----GHMNEKNFVGLTVNSEYIACGS-ESNEVYVYH 122 (179)
Q Consensus 65 -~~--l~~~~-------------~d~~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~-~d~~v~vwd 122 (179)
+. +++++ .++.+.+|++. +++....+. .+...+..++|+|+|++++++. .++.|.+||
T Consensus 94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHR 173 (365)
T ss_dssp CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 53 44553 68899999997 455443333 2445788999999999887765 367999999
Q ss_pred cC-CCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 123 KE-ISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 123 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
+. +++.........+ . +...+..++|+|+|+++++++. ++.|.+|++.
T Consensus 174 ~~~~g~~~~~~~~~~~-------~-~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 174 KLASGEVELVGSVDAP-------D-PGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp ECTTSCEEEEEEEECS-------S-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEeeeEecC-------C-CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 98 6654322111100 0 0345889999999999988775 7899999764
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=7.9e-14 Score=97.85 Aligned_cols=86 Identities=8% Similarity=-0.023 Sum_probs=54.2
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe--------------------CCCcee--eec------ccC
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY--------------------QSTAPC--VHG------HKK 54 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------------------~~~~~~--~~~------~~~ 54 (179)
|+.|.+||..+++.+..+...... .++|+|+++.++++. .+.+.+ +.. +..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 678888888888877777654444 888888887776653 111111 111 112
Q ss_pred ceeEEEEeeC-CeEEEecC--CCcEEEEecCCCcceee
Q 038439 55 AVSYVKFLSN-DELASAST--DSTLRLWDVKENLPVRT 89 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~~~ 89 (179)
....++++|+ ++++++.. ++.|.+||+.+++.+..
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 3446778888 67766653 56788888776655444
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=2.9e-14 Score=108.52 Aligned_cols=165 Identities=10% Similarity=0.042 Sum_probs=106.3
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee---eecccCce---------------
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC---VHGHKKAV--------------- 56 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~i--------------- 56 (179)
+.+.+||+.+++......+...+...+|||||+.++.+. ..++.. ..++...+
T Consensus 92 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred eEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 677899999998765445678899999999998776654 122222 22222222
Q ss_pred --eEEEEeeC-CeEEEecCCC------------------------------------cEEEEecCC---Cc--ceeeecC
Q 038439 57 --SYVKFLSN-DELASASTDS------------------------------------TLRLWDVKE---NL--PVRTFRG 92 (179)
Q Consensus 57 --~~~~~~~~-~~l~~~~~d~------------------------------------~v~iwd~~~---~~--~~~~~~~ 92 (179)
..+.|+|| ..|+.++.|. .|++||+.+ ++ ....+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 34889999 7788765321 478899887 63 2333332
Q ss_pred ------CCCCeEEEEEeeCCCEEEEecc----CCcEEEEEcCCCc----ccccccc--CCCCCCCCcccCCcce-----E
Q 038439 93 ------HMNEKNFVGLTVNSEYIACGSE----SNEVYVYHKEISK----PVTWHRF--SSPDMDDTDEDAGSYF-----I 151 (179)
Q Consensus 93 ------~~~~v~~~~~~~~~~~~~~~~~----d~~v~vwd~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~-----i 151 (179)
+...+..++|+|||+.++.... +..|.+||+.+++ +.....+ ..+ ... .
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~----------~~~v~~~~~ 321 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST----------TGWVGRFRP 321 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS----------SSCSSSSSC
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC----------CceEccCcC
Confidence 5667889999999997665432 3479999999987 2222211 111 112 2
Q ss_pred EEEEEccCCCeEE-EEe-CCC--cEEEEeec
Q 038439 152 SAVCWKSDSPTML-TAN-SQG--TIKVLVLA 178 (179)
Q Consensus 152 ~~~~~~~~~~~l~-~~~-~dg--~i~iwd~~ 178 (179)
..+.|+|||+.++ ..+ .+| .|++||+.
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 3578999999876 555 444 46666653
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=3.8e-13 Score=93.18 Aligned_cols=164 Identities=9% Similarity=0.060 Sum_probs=114.1
Q ss_pred CccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEe----------CCCc--ee--e---------ecccCcee
Q 038439 3 YGKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKY----------QSTA--PC--V---------HGHKKAVS 57 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~----------~~~~--~~--~---------~~~~~~i~ 57 (179)
+++|.+||..+++.+..+. +-..+..++++|+|. ++++. ..++ .+ + .++.....
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 4689999999888877665 335789999999995 55554 1122 12 2 23334678
Q ss_pred EEEEee-C-CeEEEec-CCCcEEEEecCCCcceeeecCC----------CCCeEEEEEeeC-CCEEEEeccCCcEEEEEc
Q 038439 58 YVKFLS-N-DELASAS-TDSTLRLWDVKENLPVRTFRGH----------MNEKNFVGLTVN-SEYIACGSESNEVYVYHK 123 (179)
Q Consensus 58 ~~~~~~-~-~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~----------~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~ 123 (179)
.++++| + ..+++.+ .++.|++|| .+++.+..+... ......++++|+ +.++++...++.|++||.
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 999999 5 6666665 589999999 556666666422 223789999998 777778788999999999
Q ss_pred CCCccccccccCCCCCCCCcccCCcceEEEEEEcc------CCCeEEEEeCCCcEEEEeec
Q 038439 124 EISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS------DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~dg~i~iwd~~ 178 (179)
.+++.+..+..... ...+..++++| +++..++...+..|++||+.
T Consensus 226 ~~G~~~~~~~~~~~----------~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~ 276 (329)
T 3fvz_A 226 DTKEFVREIKHASF----------GRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS 276 (329)
T ss_dssp TTCCEEEEECCTTT----------TTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT
T ss_pred CCCcEEEEEecccc----------CCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC
Confidence 98877766543222 45677888888 44444444445688888854
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.57 E-value=1.3e-13 Score=103.60 Aligned_cols=170 Identities=6% Similarity=-0.056 Sum_probs=108.0
Q ss_pred CccEEEEEcC--C-ceeEEeec-----CCCceeEEEEcCCCCeEEEEeCC--------------------------Ccee
Q 038439 3 YGKVKVWCTR--Q-EASVLNID-----MKANICCVKYNPGSSNYIAKYQS--------------------------TAPC 48 (179)
Q Consensus 3 d~~i~vwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~--------------------------~~~~ 48 (179)
+..|.++++. . ++...... +...+.+++|+|+|+.++++... ++..
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 3456666665 2 44333223 45678999999999877666421 1111
Q ss_pred -ee-cccCceeEEEEeeC-CeEEEecCC--------CcEEEEecC-CC---cceeeecCCCCCeEEEEEeeCCCEEEEec
Q 038439 49 -VH-GHKKAVSYVKFLSN-DELASASTD--------STLRLWDVK-EN---LPVRTFRGHMNEKNFVGLTVNSEYIACGS 113 (179)
Q Consensus 49 -~~-~~~~~i~~~~~~~~-~~l~~~~~d--------~~v~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 113 (179)
+. .+...+..++|+|| +.|+.++.+ ..|++||+. ++ +.......+...+..+.|+|||++++++.
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 22 33455677899999 788877644 379999998 56 33333344467789999999999888888
Q ss_pred cCC--cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 114 ESN--EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 114 ~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.++ .|.+||+.+++........... .. ..- ...+..++|+|+++++++++. +.++||.+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~-~~--p~w-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCRREEEF-AG--PLW-TPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSCCSSBS-SC--CCC-STTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred CCCCeEEEEEECCCCceeecccccccc-cC--ccc-cccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 888 5666676666543322211000 00 000 111456889999999999998 99999943
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.55 E-value=3.7e-14 Score=99.91 Aligned_cols=173 Identities=9% Similarity=0.050 Sum_probs=103.9
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcC-CCCeEEEEeCC-----Ccee------------eeccc--CceeEEEEe
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNP-GSSNYIAKYQS-----TAPC------------VHGHK--KAVSYVKFL 62 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~-----~~~~------------~~~~~--~~i~~~~~~ 62 (179)
+..|.+||+.+++......+...+..++|+| +|..++.+... ...+ +..+. ..+..+.|+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 4679999999988766667777899999999 98666555421 1111 22222 246778999
Q ss_pred eC-CeEEEecC-CC----cEEEEecCCCccee--eecCCCC---CeEEEEEeeCCCEEEEe---------ccCCcEEEEE
Q 038439 63 SN-DELASAST-DS----TLRLWDVKENLPVR--TFRGHMN---EKNFVGLTVNSEYIACG---------SESNEVYVYH 122 (179)
Q Consensus 63 ~~-~~l~~~~~-d~----~v~iwd~~~~~~~~--~~~~~~~---~v~~~~~~~~~~~~~~~---------~~d~~v~vwd 122 (179)
|+ ..|+..+. ++ .|.+||+.+++... .+..+.. ....+.|+|||+.++.. ..+..|++||
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 247 PDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 99 66655433 22 39999999876432 2222100 01123699999987753 4467899999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEee
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVL 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~ 177 (179)
+.+++.......... ..... ......+..++|+|||+.|+..+. +|...||.+
T Consensus 327 ~~~~~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 327 MKNGTQHRVARHDTS-WKVFE-GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TTTTEEEEEEECCCC-CCCBT-TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccCCceEEeccccCc-ccccc-cccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 998765332221100 00000 000113677899999998876664 677767654
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=7.9e-12 Score=84.69 Aligned_cols=162 Identities=9% Similarity=0.044 Sum_probs=112.1
Q ss_pred CCccEEEEEcCCceeEEeecC-------CCceeEEEE-cCCCCeEEEEeC-----------CCcee--ee-cccCceeEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDM-------KANICCVKY-NPGSSNYIAKYQ-----------STAPC--VH-GHKKAVSYV 59 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~-------~~~v~~~~~-~~~~~~~~~~~~-----------~~~~~--~~-~~~~~i~~~ 59 (179)
.++.|.+||.. ++.+..+.. ...+..+++ .+++ .++++.. .++.+ +. .+...+..+
T Consensus 49 ~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i 126 (286)
T 1q7f_A 49 NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGV 126 (286)
T ss_dssp GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEE
T ss_pred CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEE
Confidence 36789999976 555555532 246889999 4666 5555541 12222 21 233467889
Q ss_pred EEeeC-CeEEEecCCCcEEEEecCCCcceeeec--CCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCC
Q 038439 60 KFLSN-DELASASTDSTLRLWDVKENLPVRTFR--GHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSS 136 (179)
Q Consensus 60 ~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~ 136 (179)
++.|+ ..+++...++.|.+||.. ++.+..+. .+...+..++++|+|+++++...++.|++||.. ++.+..+....
T Consensus 127 ~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g 204 (286)
T 1q7f_A 127 TVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEG 204 (286)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTT
T ss_pred EEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCC
Confidence 99999 777777778999999964 55555553 334568899999999988888889999999974 44333332211
Q ss_pred CCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC-cEEEEee
Q 038439 137 PDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG-TIKVLVL 177 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd~ 177 (179)
. ...+..++++++|+++++...++ .|.+||.
T Consensus 205 ~----------~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 205 I----------TNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp T----------SCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred c----------cCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 0 24678999999999888887776 9999985
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=3.1e-12 Score=88.60 Aligned_cols=167 Identities=10% Similarity=0.031 Sum_probs=112.7
Q ss_pred CCccEEEEEcCCce-eEEeec----------CCCceeEEEEcC-CCCeEEEEeC-----------CCcee--ee------
Q 038439 2 AYGKVKVWCTRQEA-SVLNID----------MKANICCVKYNP-GSSNYIAKYQ-----------STAPC--VH------ 50 (179)
Q Consensus 2 ~d~~i~vwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~~~~~~~-----------~~~~~--~~------ 50 (179)
.++.|++||..... .+..+. +-..+..++++| ++ .++++.. .++.+ +.
T Consensus 110 ~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~ 188 (329)
T 3fvz_A 110 ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGS 188 (329)
T ss_dssp TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEECTTSCEEEEECEECCSS
T ss_pred CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCC
Confidence 35778888865442 444442 223588999999 66 4544431 12222 11
Q ss_pred ----cccCceeEEEEeeC-C-eEEEecCCCcEEEEecCCCcceeeec--CCCCCeEEEEEee------CCCEEEEeccCC
Q 038439 51 ----GHKKAVSYVKFLSN-D-ELASASTDSTLRLWDVKENLPVRTFR--GHMNEKNFVGLTV------NSEYIACGSESN 116 (179)
Q Consensus 51 ----~~~~~i~~~~~~~~-~-~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~------~~~~~~~~~~d~ 116 (179)
++......++++|+ + ++++...++.|++||..+++.+..+. .+...+..++++| +|+.+++...+.
T Consensus 189 ~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~ 268 (329)
T 3fvz_A 189 SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPV 268 (329)
T ss_dssp SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCC
T ss_pred CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCc
Confidence 12233788999998 4 45566678899999998888887774 3455688899999 333333334456
Q ss_pred cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 117 EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 117 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.|++||+.+++.+..+.... .+...+..++++|+|+.+++...++.|++|++.
T Consensus 269 ~v~~~~~~~g~~~~~~~~~~---------~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 269 QGFVMNFSSGEIIDVFKPVR---------KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CEEEEETTTCCEEEEECCSS---------SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEEEEcCCCeEEEEEcCCC---------CccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 89999999988776643211 014568999999999888888889999999974
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=3.3e-12 Score=88.51 Aligned_cols=161 Identities=7% Similarity=-0.042 Sum_probs=115.7
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eeccc-----CceeEEEEee
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHK-----KAVSYVKFLS 63 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~-----~~i~~~~~~~ 63 (179)
.++.|.+||..+++.+.++.....+..++++|++ .++++. .+.+.. +.... .....+++ .
T Consensus 62 ~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~ 139 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y 139 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E
T ss_pred CCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E
Confidence 3578999999999998888777889999999998 555554 222222 21111 13445666 4
Q ss_pred CCeEEEec--CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC----------CcEEEEEcCCCccccc
Q 038439 64 NDELASAS--TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES----------NEVYVYHKEISKPVTW 131 (179)
Q Consensus 64 ~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----------~~v~vwd~~~~~~~~~ 131 (179)
++.++.+. .++.|.++|+.+++.+..+... .....+.++|+|++++++..+ +.|.++|..+++....
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~ 218 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ 218 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE
Confidence 44544444 4889999999998887777643 345678899999987777654 7899999998876655
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+.... ...+..++++|+++.|+++.. .|.+||+.
T Consensus 219 ~~~~~-----------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 219 FKFKL-----------GDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp EECCT-----------TCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred EecCC-----------CCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 44321 235788999999999988765 88899875
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.52 E-value=1.3e-12 Score=92.09 Aligned_cols=158 Identities=6% Similarity=-0.027 Sum_probs=108.5
Q ss_pred EEEcCCceeEEeec-CCCceeE-----EEEcCCCCeEEEEeC-CC------------cee--eecccCceeEEEEeeC-C
Q 038439 8 VWCTRQEASVLNID-MKANICC-----VKYNPGSSNYIAKYQ-ST------------APC--VHGHKKAVSYVKFLSN-D 65 (179)
Q Consensus 8 vwd~~~~~~~~~~~-~~~~v~~-----~~~~~~~~~~~~~~~-~~------------~~~--~~~~~~~i~~~~~~~~-~ 65 (179)
.+|..++..+..+. +...... .+|+|+|+.++.++. .+ +.. ..++...+..+.|+|+ .
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 45667777766664 4444555 889999977777662 22 122 2233344446789999 8
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEE--EeeCCCEEEEe----------------------ccCCcEEEE
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVG--LTVNSEYIACG----------------------SESNEVYVY 121 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~----------------------~~d~~v~vw 121 (179)
.|+.++.++.|++||+.+++....+..+...+.... ++|++++++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 899999999999999999887666655555454443 48899988742 234679999
Q ss_pred EcCCCccccccccCCCCCCCCcccCCcceEEEEEEcc-CCCeEEEEeCC------CcEEEEeec
Q 038439 122 HKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS-DSPTMLTANSQ------GTIKVLVLA 178 (179)
Q Consensus 122 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~iwd~~ 178 (179)
|+.+++....... ...+..+.|+| +|+.|+....+ ..|.++|+.
T Consensus 174 d~~~g~~~~l~~~-------------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 174 DLKTGESTVILQE-------------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp ETTTCCEEEEEEE-------------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ECCCCceEEeecC-------------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 9998865443322 44688999999 99988877653 267777653
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1.4e-12 Score=91.82 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=99.6
Q ss_pred ceeEEEEcCCCCeEEEEeCC--------------------Cce-eeecccCceeEEEEeeCCeEEEecCCCcEEEEecCC
Q 038439 25 NICCVKYNPGSSNYIAKYQS--------------------TAP-CVHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKE 83 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~ 83 (179)
++..+++++....+++++.. .++ ....+.. |+.++| ....|+++ .++.|++||+++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchh
Confidence 58999999998666666611 122 2333556 999999 33888887 889999999987
Q ss_pred CcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeE
Q 038439 84 NLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTM 163 (179)
Q Consensus 84 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 163 (179)
.........+...+..+.+.+. .++++..||.|.+||+.++.... . ...|.+++|+|+| +
T Consensus 116 l~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~-------------~~~Vs~v~WSpkG--~ 175 (388)
T 1xip_A 116 LSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---L-------------AQNVTSFDVTNSQ--L 175 (388)
T ss_dssp TTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---E-------------EESEEEEEECSSE--E
T ss_pred hhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---c-------------cCCceEEEEcCCc--e
Confidence 6655556566677777766543 38888999999999999876542 2 5579999999999 7
Q ss_pred EEEeCCCcEEEEeec
Q 038439 164 LTANSQGTIKVLVLA 178 (179)
Q Consensus 164 ~~~~~dg~i~iwd~~ 178 (179)
+.|..||.+++|+..
T Consensus 176 ~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 176 AVLLKDRSFQSFAWR 190 (388)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEEEcCCcEEEEcCC
Confidence 889999999999764
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=2.6e-12 Score=90.56 Aligned_cols=170 Identities=9% Similarity=0.031 Sum_probs=104.2
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcC-CCCeEEEEeCCC-----cee------------eecc--cCceeEEEEe
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNP-GSSNYIAKYQST-----APC------------VHGH--KKAVSYVKFL 62 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~-----~~~------------~~~~--~~~i~~~~~~ 62 (179)
+..|.+||+.+++......+...+..+.|+| ++..++.+.... ..+ +..+ ...+..+.|+
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEEC
T ss_pred cceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEEC
Confidence 4689999999888766666777899999999 775565554211 111 1111 2246778999
Q ss_pred eC-CeEEEecCC-----CcEEEEecCCCcceeeecCCCCCeEEEEEee-CCCEEEEec----------------cCCcEE
Q 038439 63 SN-DELASASTD-----STLRLWDVKENLPVRTFRGHMNEKNFVGLTV-NSEYIACGS----------------ESNEVY 119 (179)
Q Consensus 63 ~~-~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~----------------~d~~v~ 119 (179)
|+ ..|+.++.+ +.|.+||+.+++...... .. ... +.|+| +|++++.++ .+..|+
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 99 766666443 349999998876443222 12 233 88999 999887654 347899
Q ss_pred EEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEee
Q 038439 120 VYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVL 177 (179)
Q Consensus 120 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~ 177 (179)
+||+.+++.......... ........ ...+..++|+|+|+.|+.++. ++...+|.+
T Consensus 324 ~~d~~~~~~~~l~~~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTS-WDVLDGDR-QITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp EEETTTTBCCEEEECCCC-CCCBTTBS-STTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEecccCceEEccCCCCc-cccccccc-cCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 999988764322111100 00000000 002455789999998877665 555556543
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.47 E-value=4.2e-12 Score=88.20 Aligned_cols=150 Identities=11% Similarity=0.043 Sum_probs=96.5
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC---------------CCcee-eecccCceeEEEEeeC-C
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ---------------STAPC-VHGHKKAVSYVKFLSN-D 65 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~~~~i~~~~~~~~-~ 65 (179)
++.|.+||+.+++... + ..+..++|+|+|+.++.+.. .++.. +..+.. +..+.|+|+ .
T Consensus 42 ~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~ 116 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSR 116 (347)
T ss_dssp EEEEEEEETTTCCEEE-E---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSS
T ss_pred cceEEEEeCCCCceEE-c---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCC
Confidence 5678899988876533 3 56889999999977766541 11111 222233 789999999 7
Q ss_pred eEEEecCC---------------------------CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCC--
Q 038439 66 ELASASTD---------------------------STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESN-- 116 (179)
Q Consensus 66 ~l~~~~~d---------------------------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-- 116 (179)
.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+|+| +++++..+.
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREII 193 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSS
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEeccccc
Confidence 77776532 5688999988876455544 3 67889999999 777765442
Q ss_pred -----cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC--------CcEEEEe
Q 038439 117 -----EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ--------GTIKVLV 176 (179)
Q Consensus 117 -----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~iwd 176 (179)
...+|.+.+++.. .+.. ...+.. ++|+|++|+.++.+ ..|.+||
T Consensus 194 ~~~~~~~~l~~~d~~~~~-~l~~-------------~~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 194 PQYFKFWDIYIWEDGKEE-KMFE-------------KVSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CCSSCCEEEEEEETTEEE-EEEE-------------EESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ccccccccEEEeCCCceE-Eecc-------------Ccceee--ECCCCCEEEEEEccccCCccccceEEEEC
Confidence 3445544444322 2211 112333 38999998877754 3577765
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=4.9e-11 Score=88.23 Aligned_cols=166 Identities=7% Similarity=-0.015 Sum_probs=119.4
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCC------------cee--eecccCceeEEEEe----e
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQST------------APC--VHGHKKAVSYVKFL----S 63 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~i~~~~~~----~ 63 (179)
.+++|.++|..+++.+..+.....+..+.|+|+|+.+++++..+ +.+ +... .....++|+ |
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~p 253 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGW 253 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTC
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCC
Confidence 57899999999999999998887888999999998777766322 222 2211 234678999 6
Q ss_pred C-CeEEEec-CCCcEEEEecCCCcceeeecCC-----------CCCeEEEEEeeCCCE-EEEeccCCcEEEEEcCCCccc
Q 038439 64 N-DELASAS-TDSTLRLWDVKENLPVRTFRGH-----------MNEKNFVGLTVNSEY-IACGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 64 ~-~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~-~~~~~~d~~v~vwd~~~~~~~ 129 (179)
+ +++++++ .++.|.++|..+.+.+..+... ...+..+..++++.. ++....+|.|.++|....+..
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 8 6666655 4689999999998887766421 125677888887554 555567799999998875433
Q ss_pred cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeecC
Q 038439 130 TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 179 (179)
....... ......+.|+|++++++++. .++.|.++|+.+
T Consensus 334 ~v~~i~~-----------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 334 KTTEISA-----------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEEEEC-----------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred eeeeeec-----------cccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3222211 33567889999999987765 578999999764
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.46 E-value=4.7e-11 Score=82.53 Aligned_cols=160 Identities=6% Similarity=0.030 Sum_probs=104.5
Q ss_pred CCccEEEEEcCCceeEEee-cCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 2 AYGKVKVWCTRQEASVLNI-DMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
.++.++.| .++....+ .+...+.+++|+|++. +++++ ..++.. ...+...+.+++++|+ .+
T Consensus 25 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l 100 (333)
T 2dg1_A 25 SESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRL 100 (333)
T ss_dssp CGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCE
T ss_pred ecccCccc---ccceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcE
Confidence 45677777 23344444 3556789999999995 55544 122222 2245567899999999 66
Q ss_pred EEEecCC----CcEEEEecCCCcceeeec--CCCCCeEEEEEeeCCCEEEEecc------CCcEEEEEcCCCcccccccc
Q 038439 67 LASASTD----STLRLWDVKENLPVRTFR--GHMNEKNFVGLTVNSEYIACGSE------SNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 67 l~~~~~d----~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~------d~~v~vwd~~~~~~~~~~~~ 134 (179)
+++...+ +.|.+||..+++....+. .....+..++++|+|+++++... .+.|..+|..+++.......
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 6666655 689999988776543332 23456889999999988776653 34566666654443221111
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEE-EeCCCcEEEEeec
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLT-ANSQGTIKVLVLA 178 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~ 178 (179)
...+..++|+|+++.|+. .+.++.|.+||++
T Consensus 181 -------------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 181 -------------ISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp -------------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred -------------CCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 234788999999986654 4557899999974
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=4.5e-11 Score=80.15 Aligned_cols=162 Identities=8% Similarity=-0.014 Sum_probs=110.1
Q ss_pred CccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEe-CC--------Cc--ee--eecccCceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKY-QS--------TA--PC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~-~~--------~~--~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
++.|.+||..+.... .+. ....+..+++.|++. ++++. .. +. .. .......+..+++.++ ..
T Consensus 86 ~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNV 163 (270)
T ss_dssp TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCE
T ss_pred CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCE
Confidence 467788886654432 232 235789999999985 55443 11 11 11 1122235678999998 76
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
+++...++.|.+||................+..++++++|..+++...++.|.+||........ ....
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~----------- 231 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFT----------- 231 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCC-----------
T ss_pred EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccC-----------
Confidence 6676678899999988665443333333668899999999877777778899999987644322 1110
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+...+..++++++|+.+++...++.|+++++.
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 02468899999999988888889999999874
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.45 E-value=3e-11 Score=83.68 Aligned_cols=162 Identities=6% Similarity=-0.071 Sum_probs=108.8
Q ss_pred CCccEEEEEcCCceeEEeecCCC------ceeEEEEcCCCCeEEEEeC------------CCcee--eecccCceeEEEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKA------NICCVKYNPGSSNYIAKYQ------------STAPC--VHGHKKAVSYVKF 61 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~i~~~~~ 61 (179)
.++.|.+||..+++....+.... ....+++ .++ .++++.. +++.+ +.. ......+.+
T Consensus 103 ~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~ 179 (328)
T 3dsm_A 103 WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVM 179 (328)
T ss_dssp SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEE
T ss_pred CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEE
Confidence 47899999999999887776554 6777888 344 6666541 11222 111 123456788
Q ss_pred eeC-CeEEEecCC----------CcEEEEecCCCcceeeecCC-CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccc
Q 038439 62 LSN-DELASASTD----------STLRLWDVKENLPVRTFRGH-MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 62 ~~~-~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~ 129 (179)
+|+ .+++++..+ +.|.++|..+++....+... ......++++|+++.++++.. .|.+||..+++..
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 888 555555544 78999999988877666532 236789999999998887765 8999999887753
Q ss_pred cccccCCCCCCCCcccCCcceEEEEEEccC-CCeEEEE----eCCCcEEEEeec
Q 038439 130 TWHRFSSPDMDDTDEDAGSYFISAVCWKSD-SPTMLTA----NSQGTIKVLVLA 178 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~----~~dg~i~iwd~~ 178 (179)
....... +......++++|+ ++.+++. ..++.|.+||..
T Consensus 258 ~~~~~~~----------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 258 VRPFLEF----------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCSBCC----------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eeeeecC----------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 2111110 0346788999995 5545554 568899999863
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.43 E-value=1.5e-12 Score=91.78 Aligned_cols=163 Identities=7% Similarity=-0.055 Sum_probs=99.1
Q ss_pred ccEEEEEcCCceeEEeecCCCcee-EEEEcCCCCeEEEEeCCCcee------------eecccCceeE------------
Q 038439 4 GKVKVWCTRQEASVLNIDMKANIC-CVKYNPGSSNYIAKYQSTAPC------------VHGHKKAVSY------------ 58 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~------------ 58 (179)
..|.+||+.+++............ .+.|+|+|+.++.+....... ...+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 468888988887655544444433 488999997776665222111 1112111111
Q ss_pred -------EEEeeC-CeEEEe-----cCCCcEEEEecCCCcceeeecCCCCCeEEEEEee-CCCEEEEeccC------CcE
Q 038439 59 -------VKFLSN-DELASA-----STDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTV-NSEYIACGSES------NEV 118 (179)
Q Consensus 59 -------~~~~~~-~~l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d------~~v 118 (179)
+.|+|+ ..++.. ..+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|
T Consensus 140 ~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 140 VGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred ccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 123344 333222 34568999999887654444 4566788999999 78876655433 468
Q ss_pred EEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 119 YVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 119 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
.+||+..++...... ... ...+..+.|+|+|++|+.++.+ +.|++||+.
T Consensus 219 ~~~d~~~~~~~~l~~-~~~----------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 219 WLVNEDGSNVRKIKE-HAE----------GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEETTSCCCEESSC-CCT----------TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred EEEECCCCceeEeec-cCC----------CccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 888887654332211 100 3357889999999988776553 449999875
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.38 E-value=1.2e-10 Score=79.29 Aligned_cols=157 Identities=11% Similarity=0.024 Sum_probs=104.9
Q ss_pred CccEEEEEcCCceeEEeec-----CCCceeEEEEcCCCCeEEEE----e----------------------C-CCcee-e
Q 038439 3 YGKVKVWCTRQEASVLNID-----MKANICCVKYNPGSSNYIAK----Y----------------------Q-STAPC-V 49 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~----~----------------------~-~~~~~-~ 49 (179)
++.|.+||..+++...... ....+..++++|+|. ++++ | . .++.. +
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAP 167 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCCCCEEEe
Confidence 4678999987776543332 123467899999995 4443 1 1 11111 3
Q ss_pred ecccCceeEEEEeeC-CeEEEecCCCcEEEEecC-CCcc---eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcC
Q 038439 50 HGHKKAVSYVKFLSN-DELASASTDSTLRLWDVK-ENLP---VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKE 124 (179)
Q Consensus 50 ~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~ 124 (179)
..+......++|+|+ ..+++.+.++.|.+||+. +++. ...+..+...+..++++++|+++++. ++.|.+||..
T Consensus 168 ~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 344455688999999 777777788999999987 4443 23333344556789999999876665 7889999987
Q ss_pred CCccccccccCCCCCCCCcccCCcceEEEEEE-ccCCCeEEEEeCCCcEEEEee
Q 038439 125 ISKPVTWHRFSSPDMDDTDEDAGSYFISAVCW-KSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iwd~ 177 (179)
++.+..+... .. +.+++| .|+++.|++++.++ +.-+++
T Consensus 246 -g~~~~~~~~~------------~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~ 284 (296)
T 3e5z_A 246 -GDELGRVLTP------------QT-TSNLCFGGPEGRTLYMTVSTE-FWSIET 284 (296)
T ss_dssp -SCEEEEEECS------------SC-CCEEEEESTTSCEEEEEETTE-EEEEEC
T ss_pred -CCEEEEEECC------------CC-ceeEEEECCCCCEEEEEcCCe-EEEEEc
Confidence 5555444431 33 788899 58999999988774 433343
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.35 E-value=3.3e-10 Score=75.93 Aligned_cols=164 Identities=7% Similarity=-0.009 Sum_probs=104.7
Q ss_pred CCccEEEEEcCCceeEEe-ecCCCceeEEEEcCCCCeEEEEeCCCc---------ee--ee-cccCceeEEEEeeC-CeE
Q 038439 2 AYGKVKVWCTRQEASVLN-IDMKANICCVKYNPGSSNYIAKYQSTA---------PC--VH-GHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~---------~~--~~-~~~~~i~~~~~~~~-~~l 67 (179)
.++.|.+||..+...... ......+.++++.+++. ++++...+. .. +. .....+..+++.++ ..+
T Consensus 44 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 122 (270)
T 1rwi_B 44 MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVY 122 (270)
T ss_dssp SSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEE
T ss_pred CCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEE
Confidence 356777777654432221 12335688999999986 444432111 11 11 22246788999988 766
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++...++.|.+|+..+.............+..++++++|+++++...++.|.+||............ .
T Consensus 123 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~---------- 190 (270)
T 1rwi_B 123 VADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT--D---------- 190 (270)
T ss_dssp EEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS--S----------
T ss_pred EEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc--C----------
Confidence 6667788999998665443322222334577899999999777777788999999876554322110 0
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...+..+++.++|..+++...++.|.+||..
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 2457889999999777777778899999864
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=2.7e-10 Score=77.56 Aligned_cols=160 Identities=8% Similarity=-0.034 Sum_probs=102.3
Q ss_pred CCccEEEEEcCCceeEEee-cCCCceeEEEEcCCCCeEEEEeC-----------CCcee-ee-c----ccCceeEEEEee
Q 038439 2 AYGKVKVWCTRQEASVLNI-DMKANICCVKYNPGSSNYIAKYQ-----------STAPC-VH-G----HKKAVSYVKFLS 63 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-----------~~~~~-~~-~----~~~~i~~~~~~~ 63 (179)
.++.|..||..++ ...+ .....+.+++++|+|. ++++.. +++.. +. . ....+..+++.|
T Consensus 48 ~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~ 124 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP 124 (296)
T ss_dssp GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT
T ss_pred CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC
Confidence 3578899998877 3444 3566799999999995 444431 22222 11 1 112356788999
Q ss_pred C-CeEEE----ecC-------------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcC-
Q 038439 64 N-DELAS----AST-------------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKE- 124 (179)
Q Consensus 64 ~-~~l~~----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~- 124 (179)
+ .++++ ++. .+.|..++.. ++ +..+..+......++|+|+++.+++.+.++.|.+||+.
T Consensus 125 ~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~ 202 (296)
T 3e5z_A 125 DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA 202 (296)
T ss_dssp TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS
T ss_pred CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC
Confidence 9 66666 331 2355555544 33 44444556667899999999988777788999999997
Q ss_pred CCcc-ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 125 ISKP-VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 125 ~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+++. .....+... ...+..++++++|+++++. ++.|.+||.+
T Consensus 203 ~g~~~~~~~~~~~~----------~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 203 RGETEYQGVHFTVE----------PGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SSCEEEEEEEECCS----------SSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCcCcCCCeEeeCC----------CCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 4443 111111100 3345678999999866555 7889999853
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.34 E-value=1.8e-10 Score=87.49 Aligned_cols=141 Identities=4% Similarity=-0.097 Sum_probs=91.0
Q ss_pred ceeEEEEcCCCCeEEEEe-C--------------CCcee-eecccCceeEEEEeeC-CeEEEecCCCc------------
Q 038439 25 NICCVKYNPGSSNYIAKY-Q--------------STAPC-VHGHKKAVSYVKFLSN-DELASASTDST------------ 75 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~-~--------------~~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~------------ 75 (179)
.+..++|||||+.++.+. . +++.+ .......+..++|+|| ..|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 588999999997665554 1 12222 1111122567899999 88888877765
Q ss_pred ----EEEEecCCCcce--eeecC--CCCCeEEEEEeeCCCEEEEecc-----CCcEEEEEcCC------Cc-cccccccC
Q 038439 76 ----LRLWDVKENLPV--RTFRG--HMNEKNFVGLTVNSEYIACGSE-----SNEVYVYHKEI------SK-PVTWHRFS 135 (179)
Q Consensus 76 ----v~iwd~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~~~-----d~~v~vwd~~~------~~-~~~~~~~~ 135 (179)
|++|++.+++.. ..+.. +...+..+.|+|||++|+..+. +..|++||+.+ +. ....+...
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 999999876532 22232 3455778999999999887654 56899999986 42 22222211
Q ss_pred CCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC----CcEEEEeec
Q 038439 136 SPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ----GTIKVLVLA 178 (179)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~ 178 (179)
...+.. .|+|+|+.|+..+.. +.|.+||+.
T Consensus 286 ------------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 286 ------------FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp ------------SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred ------------CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 122222 478889888776653 358888874
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.33 E-value=4.1e-10 Score=85.52 Aligned_cols=162 Identities=6% Similarity=-0.040 Sum_probs=105.5
Q ss_pred cEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCc---------------ee---------------eec--c
Q 038439 5 KVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTA---------------PC---------------VHG--H 52 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------------~~---------------~~~--~ 52 (179)
.|++||+.+++.+........+..++|+|||+.++.+..... .+ +.. |
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE 231 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC
Confidence 899999999987664333333778999999987777652111 01 111 2
Q ss_pred cCceeEEEEeeC-CeEEEecC-----CCcEEEEecCC------Cc-ceeeecCCCCCeEEEEEeeCCCEEEEeccC----
Q 038439 53 KKAVSYVKFLSN-DELASAST-----DSTLRLWDVKE------NL-PVRTFRGHMNEKNFVGLTVNSEYIACGSES---- 115 (179)
Q Consensus 53 ~~~i~~~~~~~~-~~l~~~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---- 115 (179)
...+..+.|+|+ ++|+..+. +..|.+||+.+ +. ....+..+...+.. .|+|+|..|+..+..
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTT
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCC
Confidence 334668899999 77776654 56899999976 43 35555555555544 588998887665442
Q ss_pred CcEEEEEcCCCcc--ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcE--EEEee
Q 038439 116 NEVYVYHKEISKP--VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTI--KVLVL 177 (179)
Q Consensus 116 ~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i--~iwd~ 177 (179)
+.|.+||+.+++. ...+.. + .....+..+.|++++.++++...++.. .+|++
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~--~--------~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVP--E--------HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEEC--C--------CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred CEEEEEeCCCCCcccceeccC--C--------CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 3699999987642 122111 1 002367889998777888888888854 45554
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=1.8e-10 Score=87.29 Aligned_cols=140 Identities=8% Similarity=-0.080 Sum_probs=88.4
Q ss_pred CceeEEEEcCCCCeEEEEe-CCC---cee----------e-ecccCce--eEEEEeeC-CeEEEecCCCc----------
Q 038439 24 ANICCVKYNPGSSNYIAKY-QST---APC----------V-HGHKKAV--SYVKFLSN-DELASASTDST---------- 75 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~-~~~---~~~----------~-~~~~~~i--~~~~~~~~-~~l~~~~~d~~---------- 75 (179)
..+.+++|||||+.++.+. ..+ ..+ . ..+...+ ..++|+|+ ..|+.++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 3689999999996665443 111 111 1 1122223 67899999 88888888766
Q ss_pred ---EEEEecCCCcc----eeeecCCCCCeEEEEEeeCCCEEEEeccCC----cEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 76 ---LRLWDVKENLP----VRTFRGHMNEKNFVGLTVNSEYIACGSESN----EVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 76 ---v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
|++|++.++.. +.....+...+..+.|+|||++|+..+.++ .|.++|..+++.......
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~---------- 270 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG---------- 270 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC----------
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC----------
Confidence 99999987652 222233445788999999999988777655 677776655543322211
Q ss_pred cCCcceEEEEEEccCCCeEEEEeC----CCcEEEEeec
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANS----QGTIKVLVLA 178 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~ 178 (179)
...+....+ +++. ++..+. ++.|.+||++
T Consensus 271 ---~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 271 ---VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp ---SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred ---CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 223344455 5666 544443 5789999874
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=1.9e-09 Score=76.00 Aligned_cols=162 Identities=9% Similarity=0.026 Sum_probs=105.6
Q ss_pred CccEEEEEcCCceeEEeecCC--------CceeEEEEcCCCCeEEEEeCC-Ccee--eecccCcee--------EEEEee
Q 038439 3 YGKVKVWCTRQEASVLNIDMK--------ANICCVKYNPGSSNYIAKYQS-TAPC--VHGHKKAVS--------YVKFLS 63 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~--------~~~~~~ 63 (179)
++.|.+||..+.+.+..+... .....++|+|+|+.++++... ...+ +. .+..+. ++.+.|
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~ 174 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHP 174 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEe
Confidence 578999999998888777532 345689999999877777532 2333 54 433321 122334
Q ss_pred C--CeEEEecCCCcEEEEecCCCcceee--------------------------------------------------ec
Q 038439 64 N--DELASASTDSTLRLWDVKENLPVRT--------------------------------------------------FR 91 (179)
Q Consensus 64 ~--~~l~~~~~d~~v~iwd~~~~~~~~~--------------------------------------------------~~ 91 (179)
+ ..+++.+.|+.+.++|. +++.... +.
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~ 253 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID 253 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeee
Confidence 4 34555566676666666 4332210 00
Q ss_pred C----------CCCCeEEEEEeeCCCEEEEecc----------CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceE
Q 038439 92 G----------HMNEKNFVGLTVNSEYIACGSE----------SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFI 151 (179)
Q Consensus 92 ~----------~~~~v~~~~~~~~~~~~~~~~~----------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 151 (179)
. .......+.++|+++.+++... .+.|.++|+.+.+.+..+.. ....
T Consensus 254 ~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-------------g~~p 320 (373)
T 2mad_H 254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-------------GHDV 320 (373)
T ss_pred ecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-------------CCCc
Confidence 0 0011223678888887776543 35799999999988877765 4457
Q ss_pred EEEEEccCCC-eEEEEe-CCCcEEEEeecC
Q 038439 152 SAVCWKSDSP-TMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 152 ~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~ 179 (179)
..+.|+|||+ .++++. .++.|.++|+++
T Consensus 321 ~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 8999999999 777777 489999999864
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.31 E-value=1.1e-10 Score=81.99 Aligned_cols=87 Identities=11% Similarity=0.023 Sum_probs=70.9
Q ss_pred EEEeeC-CeEEEecC-----------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCC
Q 038439 59 VKFLSN-DELASAST-----------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 59 ~~~~~~-~~l~~~~~-----------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~ 126 (179)
++++|+ +.++.+.. ...|.+||+.+++.+..+..+. +..++|+|+|+++++++. +.|.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 688998 66655432 3489999999999999888766 899999999999998887 99999999999
Q ss_pred --cccccc-ccCCCCCCCCcccCCcceEEEEEEccCCC
Q 038439 127 --KPVTWH-RFSSPDMDDTDEDAGSYFISAVCWKSDSP 161 (179)
Q Consensus 127 --~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 161 (179)
+.+..+ .. ......++++|+|+
T Consensus 336 ~l~~~~~i~~~-------------G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGA-------------AEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTS-------------CSSEEEEEECCCSC
T ss_pred cceeeEEeccC-------------CCCcEEEEecCCCC
Confidence 776654 22 45678899999986
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.31 E-value=2.3e-09 Score=73.30 Aligned_cols=162 Identities=9% Similarity=0.025 Sum_probs=105.8
Q ss_pred ccEEEEEcCCceeEEe-ec-----CCCceeEEEEcCCCCeEEEEeCC---------------Ccee-ee---------cc
Q 038439 4 GKVKVWCTRQEASVLN-ID-----MKANICCVKYNPGSSNYIAKYQS---------------TAPC-VH---------GH 52 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~~~~~~~~---------------~~~~-~~---------~~ 52 (179)
+.|.+||.. ++.... .. ....+.++++.|+|..+++.... .... +. .+
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 170 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTA 170 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccC
Confidence 357788877 654433 22 12358899999999544444221 1111 21 22
Q ss_pred cCceeEEEEe----eC-CeE-EEecCCCcEEEEecC-CCc-----ceeeecCCC-CCeEEEEEeeCCCEEEEeccCCcEE
Q 038439 53 KKAVSYVKFL----SN-DEL-ASASTDSTLRLWDVK-ENL-----PVRTFRGHM-NEKNFVGLTVNSEYIACGSESNEVY 119 (179)
Q Consensus 53 ~~~i~~~~~~----~~-~~l-~~~~~d~~v~iwd~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~ 119 (179)
......++++ |+ +.+ ++...++.|.+||+. +++ ....+..+. ..+..++++++|+++++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 2345678899 88 454 454668899999976 343 222333333 5578899999999888877788999
Q ss_pred EEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE-eCCCcEEEEeec
Q 038439 120 VYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA-NSQGTIKVLVLA 178 (179)
Q Consensus 120 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 178 (179)
+||..+++....+... ...+.+++++|+++.|+++ ..++.|..|++.
T Consensus 251 ~~d~~~g~~~~~~~~~------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCP------------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EECTTCBSCSEEEECS------------SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEcCCCCcEeEEEeCC------------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 9999877665444321 3568999999999955554 456889999864
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=2.5e-09 Score=72.35 Aligned_cols=157 Identities=8% Similarity=0.032 Sum_probs=110.8
Q ss_pred CCccEEEEEcCCceeEEeecCC--CceeEEEEcCCCCeEEEEeC-CCcee-eec----------------ccCceeEEEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMK--ANICCVKYNPGSSNYIAKYQ-STAPC-VHG----------------HKKAVSYVKF 61 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~-~~~~~-~~~----------------~~~~i~~~~~ 61 (179)
.++.|..||. +++.+..+... ..+.++.+.|+|..+++.+. ..+.+ +.. +......+..
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~ 132 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK 132 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEE
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceE
Confidence 3567888998 78888888743 57889999999966665442 22222 211 1122334556
Q ss_pred eeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCC
Q 038439 62 LSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 62 ~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
.++ +++++...++.|..||.. ++.+.++... ..+..+...++|+.++++..++.|..+|..+++.+..+......
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~-- 208 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE-- 208 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB--
T ss_pred CCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC--
Confidence 677 888899999999999988 8988888754 34567788899999999888889999999999987666422110
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
......+..+...++|+.+++..
T Consensus 209 ----~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 209 ----GVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp ----SCCCSEEEEEEECTTSCEEEEEE
T ss_pred ----CccccccccceEcCCCCEEEEec
Confidence 00023477788888888877763
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.28 E-value=4.8e-10 Score=77.79 Aligned_cols=149 Identities=6% Similarity=-0.055 Sum_probs=96.8
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCC--------Ccee--ee--------cccCceeEEEEeeC-
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQS--------TAPC--VH--------GHKKAVSYVKFLSN- 64 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------~~~~--~~--------~~~~~i~~~~~~~~- 64 (179)
..|.+||+.+++.+..+... .+..++|+|+| .+++.... ...+ +. .+ ..+.. ++|+
T Consensus 152 ~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~--~spdg 226 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYA--VDSDG 226 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEE--EEECS
T ss_pred ceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceee--ECCCC
Confidence 57899999888763444333 88899999999 44444321 1122 22 12 22333 3888
Q ss_pred CeEEEecCC--------CcEEEEecCCCcceeeecCCCCCeEE-EEEeeCCCEEEEeccCCcEEEEEcCCCccccccccC
Q 038439 65 DELASASTD--------STLRLWDVKENLPVRTFRGHMNEKNF-VGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFS 135 (179)
Q Consensus 65 ~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~ 135 (179)
..++.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++.++.+++| +.+++.......
T Consensus 227 ~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~- 300 (347)
T 2gop_A 227 ERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKG- 300 (347)
T ss_dssp SCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECS-
T ss_pred CEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecC-
Confidence 777766643 3678888 55544444455667776 8999 88 88899999999999 875543222111
Q ss_pred CCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcE-EEEee
Q 038439 136 SPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTI-KVLVL 177 (179)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i-~iwd~ 177 (179)
...+..++|+| ..+++++.++.. .+|.+
T Consensus 301 ------------~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 301 ------------RHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp ------------SSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred ------------CCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 45788999999 677777776654 67754
No 195
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.27 E-value=1e-10 Score=80.84 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=95.8
Q ss_pred ceeEEEEcCCCCeEEEEe--C-----CCcee--eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCC
Q 038439 25 NICCVKYNPGSSNYIAKY--Q-----STAPC--VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHM 94 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~--~-----~~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 94 (179)
.+.++.|+|++..++... . ..+.+ +..+...+.+++|+|+ .+++++..++.|.+||..+++.......+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 86 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK 86 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS
T ss_pred ccceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC
Confidence 456677777654333222 0 11222 4556667789999999 766778889999999998876554443456
Q ss_pred CCeEEEEEeeCCCEEEEeccC----CcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC--
Q 038439 95 NEKNFVGLTVNSEYIACGSES----NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS-- 168 (179)
Q Consensus 95 ~~v~~~~~~~~~~~~~~~~~d----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 168 (179)
..+..++++|+|+++++...+ +.|.+||..+++.......... ...+..++++|+|+++++...
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST----------AYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS----------CCCEEEEEECTTSCEEEEECCCB
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc----------CCcccceEECCCCCEEEEecccc
Confidence 679999999999988877666 6899999987664322211111 456889999999987776553
Q ss_pred ----CCcEEEEee
Q 038439 169 ----QGTIKVLVL 177 (179)
Q Consensus 169 ----dg~i~iwd~ 177 (179)
.+.|..+|.
T Consensus 157 ~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 157 STNPLGGVYYVSP 169 (333)
T ss_dssp TTBCCEEEEEECT
T ss_pred ccCCCceEEEEeC
Confidence 245555553
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=1.7e-10 Score=81.36 Aligned_cols=147 Identities=12% Similarity=0.024 Sum_probs=97.2
Q ss_pred cEEEEEcCCce-----------eEEeecCCCceeEEEEcCCCCeEEEEeCCCce----------e--eecccCceeEEEE
Q 038439 5 KVKVWCTRQEA-----------SVLNIDMKANICCVKYNPGSSNYIAKYQSTAP----------C--VHGHKKAVSYVKF 61 (179)
Q Consensus 5 ~i~vwd~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~i~~~~~ 61 (179)
.+.+|++.+.+ ....+.+.. |+.++| ++..++++- .+.. . ...|..++.++.+
T Consensus 59 ~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~-~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~ 134 (388)
T 1xip_A 59 KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVST-RNALYSLDLEELSEFRTVTSFEKPVFQLKN 134 (388)
T ss_dssp EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEE-SSEEEEEESSSTTCEEEEEECSSCEEEEEE
T ss_pred EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEc-CCcEEEEEchhhhccCccceeecceeeEEe
Confidence 56678765433 223445666 999999 774444442 1111 1 3455667777766
Q ss_pred eeCCeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcc--ccccccCCCCC
Q 038439 62 LSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKP--VTWHRFSSPDM 139 (179)
Q Consensus 62 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~--~~~~~~~~~~~ 139 (179)
.+. .+++++.||.|.+||+.++.... +...|.+++|+|+| ++.|..||.+++|+....+. ...+.. +..
T Consensus 135 ~~p-~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~--Pp~ 205 (388)
T 1xip_A 135 VNN-TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSL--PSE 205 (388)
T ss_dssp CSS-EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECC--CHH
T ss_pred cCC-CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecC--Ccc
Confidence 543 48888999999999999776543 34579999999999 67889999999999887664 322211 100
Q ss_pred CCCcccCCcceEEEEEEccCCCeEEE
Q 038439 140 DDTDEDAGSYFISAVCWKSDSPTMLT 165 (179)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~~~~l~~ 165 (179)
...... |...|.+++|.+++.++++
T Consensus 206 ~~~~~~-~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 206 LEELPV-EEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHTSCT-TTSEEEEEEESSSSEEEEE
T ss_pred cccccC-CCeeEEEEEEecCCeEEEE
Confidence 000001 2678999999999988876
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.26 E-value=4.7e-11 Score=90.46 Aligned_cols=116 Identities=9% Similarity=-0.056 Sum_probs=81.5
Q ss_pred cccCceeEEEEeeC-CeEE-----EecCCCcEEEEecCCCcce-eeecCCCCCeEEEEEeeCCCEEEEeccCCc------
Q 038439 51 GHKKAVSYVKFLSN-DELA-----SASTDSTLRLWDVKENLPV-RTFRGHMNEKNFVGLTVNSEYIACGSESNE------ 117 (179)
Q Consensus 51 ~~~~~i~~~~~~~~-~~l~-----~~~~d~~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~------ 117 (179)
+|...+..++|+|| .+|+ .|+.+..|++||+.+++.+ .... .......++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 35557889999999 7777 3444578999999998765 2111 1111257899999999998887765
Q ss_pred -------EEEEEcCCCccc--cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC----cEEEEee
Q 038439 118 -------VYVYHKEISKPV--TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG----TIKVLVL 177 (179)
Q Consensus 118 -------v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~iwd~ 177 (179)
|++|++.+++.. ..+....+ ...+..+.|+|||++|+.++.++ .|.+|+.
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 999999887632 22221111 34688999999999998877665 5666653
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=4.9e-09 Score=71.53 Aligned_cols=154 Identities=7% Similarity=0.057 Sum_probs=102.0
Q ss_pred CccEEEEEcCCceeEEeecC-----CCceeEEEEcCCCCeEEEEeC----------CCcee--e---------ecccCce
Q 038439 3 YGKVKVWCTRQEASVLNIDM-----KANICCVKYNPGSSNYIAKYQ----------STAPC--V---------HGHKKAV 56 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~----------~~~~~--~---------~~~~~~i 56 (179)
++.|.+||..+++....... ...+..+++.|+|..+++... ....+ + ..+....
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p 151 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS 151 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc
Confidence 35688888887765433221 235889999999964444311 00111 1 1222335
Q ss_pred eEEEEeeC-CeE-EEecCCCcEEEEec--CCCcc-----eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc
Q 038439 57 SYVKFLSN-DEL-ASASTDSTLRLWDV--KENLP-----VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 57 ~~~~~~~~-~~l-~~~~~d~~v~iwd~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
+.++|+|+ +.+ ++.+.++.|.+||+ .++.. ...+......+..+++.++|+++++....+.|..||..+++
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 67899999 544 56666889999987 34432 12222233567889999999888877778889999999888
Q ss_pred cccccccCCCCCCCCcccCCcceEEEEEEc-cCCCeEEEEeC
Q 038439 128 PVTWHRFSSPDMDDTDEDAGSYFISAVCWK-SDSPTMLTANS 168 (179)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~ 168 (179)
.+..+... ...+++++|. |+++.|++++.
T Consensus 232 ~~~~i~~p------------~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 232 RLQTVKLP------------VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEECS------------SSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEECC------------CCCceEEEEeCCCCCEEEEEcC
Confidence 77666542 3568999998 88887776654
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.22 E-value=1e-09 Score=78.30 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCC-eEEEEe-CCCcEEEEeecC
Q 038439 116 NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP-TMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 116 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~ 179 (179)
+.|.++|..+.+.+..+.. ......+.|+|+++ .+++.. .++.|.++|+.+
T Consensus 350 ~~VsVID~~T~kvv~~I~v-------------g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 350 RFVVVLNAETGERINKIEL-------------GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEEETTTCCEEEEEEE-------------EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCeEEEEEEC-------------CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3466666666666655544 44578899999999 888888 599999999864
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=1.1e-08 Score=69.76 Aligned_cols=167 Identities=11% Similarity=0.139 Sum_probs=101.4
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee-eec-----ccCceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC-VHG-----HKKAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~-~~~-----~~~~i~~~~~~~~-~~ 66 (179)
++.|..||..+++. ..+.....+.+++++|+|. ++++. .+++.. +.. ....++.+++.|+ ++
T Consensus 34 ~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~-l~v~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l 111 (297)
T 3g4e_A 34 AKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGG-YVATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRY 111 (297)
T ss_dssp TTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSS-EEEEETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCE
T ss_pred CCEEEEEECCCCcE-EEEeCCCceEEEEECCCCC-EEEEECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCE
Confidence 56778888776654 3455677899999999996 44443 222222 111 1234678999999 65
Q ss_pred EEEecC---------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEE-EeccCCcEEEEEc--CCCcccccccc
Q 038439 67 LASAST---------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIA-CGSESNEVYVYHK--EISKPVTWHRF 134 (179)
Q Consensus 67 l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~--~~~~~~~~~~~ 134 (179)
+++... ...-.+|.+.....+..+.........++|+|+++.++ +.+.++.|.+||+ .++.......+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 112 FAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp EEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred EEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 554422 12345555543222333333334567899999998764 5566788999997 44442111101
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
... ..+...+..+++.++|++.++...++.|..||..
T Consensus 192 ~~~-------~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 192 YKL-------EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEC-------CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred EEC-------CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 000 0003467889999999877777778889999864
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.20 E-value=3.7e-08 Score=66.64 Aligned_cols=162 Identities=6% Similarity=-0.041 Sum_probs=105.4
Q ss_pred CccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeC---------CCcee---eecccCceeEEEEeeC-CeEE
Q 038439 3 YGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQ---------STAPC---VHGHKKAVSYVKFLSN-DELA 68 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~i~~~~~~~~-~~l~ 68 (179)
++.|..||.........+. ....+.++++.|++..+++... .++.. .......+..+++.++ ..++
T Consensus 77 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 77 ANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred CCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEE
Confidence 4667788765221111222 3457899999999854444321 11111 2223456788899888 6666
Q ss_pred EecCCCcEEEEecCCCcceee-ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 69 SASTDSTLRLWDVKENLPVRT-FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
+...++.|..||. +++.... .......+..+++.++|+++++...++.|..||. +++.. .+.....
T Consensus 157 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~---------- 223 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTP---------- 223 (299)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSST----------
T ss_pred EeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCC----------
Confidence 6666789999998 5554332 2233456789999999998777777889999998 65532 2222111
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...+..+++.++|+.+++...++.|..||.
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 456889999999986666657788998885
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.20 E-value=8.2e-09 Score=73.62 Aligned_cols=173 Identities=8% Similarity=0.001 Sum_probs=106.5
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCc-ee-------------e----ecccCceeEEEEeeC
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTA-PC-------------V----HGHKKAVSYVKFLSN 64 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~-------------~----~~~~~~i~~~~~~~~ 64 (179)
++.|++||..+++............ ++|+|++..++++...+. .+ + ........+++++|+
T Consensus 151 ~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 151 DPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp TTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred CCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 5788999988777655554444444 999999976766653221 11 1 113345678899995
Q ss_pred -CeEEEecCCCcEEEEecCCCcceee----ecCCCCCe-E-EEEEeeC-CCEEEEeccCCcEEEEEcCCCccccccccC-
Q 038439 65 -DELASASTDSTLRLWDVKENLPVRT----FRGHMNEK-N-FVGLTVN-SEYIACGSESNEVYVYHKEISKPVTWHRFS- 135 (179)
Q Consensus 65 -~~l~~~~~d~~v~iwd~~~~~~~~~----~~~~~~~v-~-~~~~~~~-~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~- 135 (179)
+.|+.+..++.|+.||...+..... ........ . .++|+|+ +.++++-...+.|+.|+.... ........
T Consensus 230 ~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~ 308 (409)
T 3hrp_A 230 EEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSAT 308 (409)
T ss_dssp SSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTT
T ss_pred CCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCC
Confidence 7776677788999999987653222 11222222 3 8999995 666666677889999987643 11111100
Q ss_pred CCCCC-CCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEee
Q 038439 136 SPDMD-DTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVL 177 (179)
Q Consensus 136 ~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~ 177 (179)
..... .......-.....++++|+|+++++-+ .++.|+.|++
T Consensus 309 ~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 309 QKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp CCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred CCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 00000 000000023478999999999777777 7889999984
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=3.1e-09 Score=81.17 Aligned_cols=141 Identities=12% Similarity=0.015 Sum_probs=86.0
Q ss_pred ceeEEEEcCCCCeEEEEe-CCCc---ee--e--------ec--ccCceeEEEEeeCCeEEEecCCCc-------------
Q 038439 25 NICCVKYNPGSSNYIAKY-QSTA---PC--V--------HG--HKKAVSYVKFLSNDELASASTDST------------- 75 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~-~~~~---~~--~--------~~--~~~~i~~~~~~~~~~l~~~~~d~~------------- 75 (179)
.+..++|||||+.++.+. ..+. .+ + .. +...+..++|+|+..|+.++.++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCC
Confidence 688999999997666554 1111 12 1 11 111225678999855665555443
Q ss_pred -EEEEecCCCcc--eeeecC--CCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCC--ccccccccCCCCCCCCc
Q 038439 76 -LRLWDVKENLP--VRTFRG--HMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEIS--KPVTWHRFSSPDMDDTD 143 (179)
Q Consensus 76 -v~iwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~--~~~~~~~~~~~~~~~~~ 143 (179)
|++|++.++.. ...+.. +...+..+.|+|||++|+..+.+ ..|++||+.++ +....+...
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------- 315 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-------- 315 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS--------
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC--------
Confidence 88999877652 223332 23357889999999998877654 38999999876 312222211
Q ss_pred ccCCcceEEEEEEccCCCeEEEEeCC----CcEEEEeec
Q 038439 144 EDAGSYFISAVCWKSDSPTMLTANSQ----GTIKVLVLA 178 (179)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~ 178 (179)
....... ++|+++.|+..+.+ +.|.+||+.
T Consensus 316 ----~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 316 ----LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp ----SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred ----CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 1122333 34888888877763 458888875
No 204
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=2.7e-12 Score=90.36 Aligned_cols=158 Identities=9% Similarity=0.029 Sum_probs=81.3
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC----------CCcee--eecccC-cee-EEEEeeCCeE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ----------STAPC--VHGHKK-AVS-YVKFLSNDEL 67 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~~--~~~~~~-~i~-~~~~~~~~~l 67 (179)
.||.|+.||..+++.+..+.. +++.+..+.+++..+++.+. +++.+ ...+.. .+. ...+..++.+
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v 95 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGIL 95 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----C
T ss_pred CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEE
Confidence 589999999999999888776 55655555566633333222 23322 111110 010 0011122667
Q ss_pred EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 68 ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
++++.++.+..||..+++.+..+..+. ...++|++..+++++.++.|+.||.++++.+..+...
T Consensus 96 ~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~------------ 159 (369)
T 2hz6_A 96 YMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF------------ 159 (369)
T ss_dssp CCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE------------
T ss_pred EEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc------------
Confidence 788889999999999998887776443 2345678888999999999999999999876554321
Q ss_pred cceEEEEEEccCC---CeEEEEeCCCcEEEEeec
Q 038439 148 SYFISAVCWKSDS---PTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 148 ~~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~ 178 (179)
......+.++. ..+++++.||.++.||.+
T Consensus 160 --~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 160 --DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp --EECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred --cccCccccCCccccceEEEECCCCEEEEEECC
Confidence 11222233322 557778889999998865
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.16 E-value=5.3e-08 Score=65.90 Aligned_cols=161 Identities=7% Similarity=-0.002 Sum_probs=106.5
Q ss_pred CccEEEEEcCCceeEEee-c-CCCceeEEEEcCCCCeEEEEeCCC---------cee---eecccCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVLNI-D-MKANICCVKYNPGSSNYIAKYQST---------APC---VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~i~~~~~~~~-~~l 67 (179)
++.|.+||.. ++..... . ....+.++++.+++..+++....+ +.. +......+..+.+.++ ..+
T Consensus 35 ~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 113 (299)
T 2z2n_A 35 ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIW 113 (299)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEE
Confidence 5678888877 4432221 1 346799999999985444432111 111 1123446788899888 666
Q ss_pred EEecCCCcEEEEecCCCcceee-ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 68 ASASTDSTLRLWDVKENLPVRT-FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
++...++.|.+||. +++.... .......+..+++.++|+.+++...++.|..||. +++... +.....
T Consensus 114 v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~--------- 181 (299)
T 2z2n_A 114 FTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTP--------- 181 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSST---------
T ss_pred EEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCC---------
Confidence 76667889999998 4443322 2223456889999999988887777889999998 554432 211111
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...+..+++.++++.+++...++.|.+||.
T Consensus 182 -~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 182 -ASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp -TCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred -CCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 345788999999987766666788988875
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.12 E-value=1.7e-08 Score=68.91 Aligned_cols=163 Identities=6% Similarity=0.019 Sum_probs=103.0
Q ss_pred CccEEEEEcCCceeEEeec-----CCCceeEEEEcCC-CCeEEEEeCC---------Ccee-e-ec-----ccCceeEEE
Q 038439 3 YGKVKVWCTRQEASVLNID-----MKANICCVKYNPG-SSNYIAKYQS---------TAPC-V-HG-----HKKAVSYVK 60 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~~~~~~~~---------~~~~-~-~~-----~~~~i~~~~ 60 (179)
++.|.+||..+++...... +...+.+++++++ + .++++... ++.. + .. ....+.+++
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~ 123 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCA 123 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEE
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC-cEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEE
Confidence 5789999987776543222 3356899999999 7 55554311 2211 2 11 113477899
Q ss_pred EeeC-CeEEEecCC---------------CcEEEEecCCCcceeeecCCCCCeEEEEEe----eCCCEEEEe-ccCCcEE
Q 038439 61 FLSN-DELASASTD---------------STLRLWDVKENLPVRTFRGHMNEKNFVGLT----VNSEYIACG-SESNEVY 119 (179)
Q Consensus 61 ~~~~-~~l~~~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~-~~d~~v~ 119 (179)
+.++ .++++...+ +.|..+|.. ++.. .+..+......++++ |+++.++++ ..++.|.
T Consensus 124 ~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~ 201 (314)
T 1pjx_A 124 FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLW 201 (314)
T ss_dssp ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEE
T ss_pred ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEE
Confidence 9998 666665544 467777765 4433 222233456789999 998765544 5678999
Q ss_pred EEEcC-CCcccc--cc-ccCCCCCCCCcccCCc-ceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 120 VYHKE-ISKPVT--WH-RFSSPDMDDTDEDAGS-YFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 120 vwd~~-~~~~~~--~~-~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
+||+. +++... .+ .... + . ..+..++++++|+++++...++.|.+||.+
T Consensus 202 ~~~~~~~g~~~~~~~~~~~~~---------~-~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 202 SYDIKGPAKIENKKVWGHIPG---------T-HEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEETTEEEEEEEEEECCC---------C-SSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred EEECCCCCccccceEEEECCC---------C-CCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 99986 333211 11 1110 0 2 457889999999988887788899999865
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.11 E-value=3.1e-09 Score=78.69 Aligned_cols=100 Identities=6% Similarity=-0.071 Sum_probs=81.4
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcC--CCccccccccCCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKE--ISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~--~~~~~~~~~~~~~~~~~~ 142 (179)
..+++...++.|.++|..+++.+..+... ..+..+.++|||+++++++.++.|.+||+. +.+.+..+..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-------- 238 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-------- 238 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--------
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--------
Confidence 45667778999999999999988888643 356789999999999999999999999996 6666655543
Q ss_pred cccCCcceEEEEEEc----cCCCeEEEEeC-CCcEEEEeec
Q 038439 143 DEDAGSYFISAVCWK----SDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~----~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
......++|+ |+|+++++++. ++.+.++|..
T Consensus 239 -----G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 239 -----GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp -----CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred -----CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 4457889999 69999888776 5899999864
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.10 E-value=5.9e-09 Score=73.36 Aligned_cols=102 Identities=11% Similarity=0.044 Sum_probs=68.4
Q ss_pred CeEEEecCCCcEEEEecCCCc--ceeeec---------C-CCCCeEEEEEeeCCCEEEEecc----------CCcEEEEE
Q 038439 65 DELASASTDSTLRLWDVKENL--PVRTFR---------G-HMNEKNFVGLTVNSEYIACGSE----------SNEVYVYH 122 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~--~~~~~~---------~-~~~~v~~~~~~~~~~~~~~~~~----------d~~v~vwd 122 (179)
+.++..+.++.|.+.|+.... .+..+. + .......++++++++.+++... .+.|.++|
T Consensus 238 G~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 238 GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 334344556677777765432 111111 0 0122334777888888777643 25799999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCC-eEEEEe-CCCcEEEEeecC
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP-TMLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~ 179 (179)
+.+++.+..+.. ...++.+.+++|++ +|+++. .++.|.++|.++
T Consensus 318 ~~t~kv~~~i~v-------------g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 318 AKTGERLAKFEM-------------GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp TTTCCEEEEEEE-------------EEEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCCeEEEEEEC-------------CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 999999888876 56789999999997 676654 489999999764
No 209
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=7e-08 Score=64.62 Aligned_cols=171 Identities=8% Similarity=0.002 Sum_probs=107.5
Q ss_pred CccEEEEEcCCceeEEeecCCCce--eEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANI--CCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
+++|.+.|+.+++.+..+...... ..+++. +..++++. .+.+.+ +.-... ....++++ ..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~ 118 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKI 118 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCE
Confidence 578999999999998887644433 344444 44666665 233333 221101 12335567 55
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCC-----CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHM-----NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
++.+..++.|.++|..+.+.+..+.-.. ..++.+.|. ++..++....++.|.+.|..+++.+..+.........
T Consensus 119 l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~ 197 (266)
T 2iwa_A 119 LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKL 197 (266)
T ss_dssp EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHH
T ss_pred EEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccc
Confidence 6666678899999999988777765321 235678887 7766666666889999999999987776542100000
Q ss_pred -CcccCCcceEEEEEEccCCCeEEE-EeCCCcEEEEeec
Q 038439 142 -TDEDAGSYFISAVCWKSDSPTMLT-ANSQGTIKVLVLA 178 (179)
Q Consensus 142 -~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~ 178 (179)
..........+.++|+|+++.+++ +...+++.+.++.
T Consensus 198 ~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 198 IDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp HHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 000000236789999999876555 5567888887764
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=1.9e-08 Score=70.63 Aligned_cols=162 Identities=10% Similarity=0.038 Sum_probs=100.7
Q ss_pred CccEEEEEcCCceeEEeecCC--------CceeEEEEcCCCCeEEEEeCC-Ccee-e---ecccCceeEEE------Eee
Q 038439 3 YGKVKVWCTRQEASVLNIDMK--------ANICCVKYNPGSSNYIAKYQS-TAPC-V---HGHKKAVSYVK------FLS 63 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~i~~~~------~~~ 63 (179)
+++|.+||..+++.+.++... .....++++|+|+.++++... ...+ + ...+ +..+. ..|
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p 172 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHP 172 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEE
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEcc
Confidence 678999999999999998643 357899999999877776421 2222 2 1111 22221 123
Q ss_pred C--CeEEEecCCCcEEEEecCC-----Ccc-------------------------------------------eeeecCC
Q 038439 64 N--DELASASTDSTLRLWDVKE-----NLP-------------------------------------------VRTFRGH 93 (179)
Q Consensus 64 ~--~~l~~~~~d~~v~iwd~~~-----~~~-------------------------------------------~~~~~~~ 93 (179)
+ ..+++.+.|+.+.+.|+.+ ++. +..+...
T Consensus 173 ~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~ 252 (368)
T 1mda_H 173 GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGN 252 (368)
T ss_dssp EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSS
T ss_pred CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEec
Confidence 3 3344444555555555443 111 0111000
Q ss_pred ----------CCCeEEEEEeeCCCEEEEecc---------CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEE
Q 038439 94 ----------MNEKNFVGLTVNSEYIACGSE---------SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154 (179)
Q Consensus 94 ----------~~~v~~~~~~~~~~~~~~~~~---------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 154 (179)
......++++|+++.++++.. ++.+.++|+.+.+.+..+.. ......+
T Consensus 253 ~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v-------------g~~p~gi 319 (368)
T 1mda_H 253 ESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-------------GHDSDAI 319 (368)
T ss_dssp CTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-------------EEEECEE
T ss_pred cccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC-------------CCCcceE
Confidence 001112679999988876543 23566999999998887765 5578999
Q ss_pred EEccCCCe-EEEEe-CCCcEEEEeecC
Q 038439 155 CWKSDSPT-MLTAN-SQGTIKVLVLAA 179 (179)
Q Consensus 155 ~~~~~~~~-l~~~~-~dg~i~iwd~~~ 179 (179)
.|+|+++. +++.. .++.|.++|+++
T Consensus 320 ~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 320 IAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred EECCCCCEEEEEccCCCCeEEEEECCC
Confidence 99999985 55555 589999999864
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.05 E-value=2e-08 Score=76.71 Aligned_cols=160 Identities=9% Similarity=-0.040 Sum_probs=100.6
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCc-------------ee---------------eec--cc
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTA-------------PC---------------VHG--HK 53 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------------~~---------------~~~--~~ 53 (179)
..|++||+.+++.+........+..++|+|+ +.++.+..... .+ +.. +.
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~ 267 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP 267 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC
Confidence 4699999999887654222223468899999 77777651111 11 111 12
Q ss_pred CceeEEEEeeC-CeEEEecCC-----CcEEEEecCCC--cceeeecCCCCCeEEEEEeeCCCEEEEecc----CCcEEEE
Q 038439 54 KAVSYVKFLSN-DELASASTD-----STLRLWDVKEN--LPVRTFRGHMNEKNFVGLTVNSEYIACGSE----SNEVYVY 121 (179)
Q Consensus 54 ~~i~~~~~~~~-~~l~~~~~d-----~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----d~~v~vw 121 (179)
..+..+.|+|+ .+|+..+.+ ..|.+||+.++ +....+..+....... ++|+|+.|+..+. ++.|.+|
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 24678899999 777766643 38999999876 3144554444444444 4588888877655 3459999
Q ss_pred EcCCCc-cccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 122 HKEISK-PVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 122 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
|+.++. ....+.. .. ...+..+.|. ++.++++...|+..+||.+
T Consensus 347 d~~~~~~~~~~l~~-~~----------~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 347 DLSGSTPRFDTVVP-ES----------KDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp ECSSSSCEEEEEEC-CC----------SSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred eCCCCccccEEEec-CC----------CCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 998752 2222211 11 3356677777 5667788888988877754
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.05 E-value=1.8e-07 Score=64.66 Aligned_cols=152 Identities=8% Similarity=0.009 Sum_probs=96.1
Q ss_pred cEEEEEcCCceeEEeecC-----CCceeEEEEcCCCCeEEEEeC------CCcee-ee--------cccCceeEEEEeeC
Q 038439 5 KVKVWCTRQEASVLNIDM-----KANICCVKYNPGSSNYIAKYQ------STAPC-VH--------GHKKAVSYVKFLSN 64 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~------~~~~~-~~--------~~~~~i~~~~~~~~ 64 (179)
.|.+||..+++....... ...+.+++++|+|..+++... ..... +. .+......++|+|+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~d 189 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPD 189 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTT
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCC
Confidence 378888877765433221 235889999999964443321 01111 22 22234567889999
Q ss_pred -CeE-EEecCCCcEEEEecC--CC-cc-----eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 65 -DEL-ASASTDSTLRLWDVK--EN-LP-----VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 65 -~~l-~~~~~d~~v~iwd~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
+.+ ++.+.++.|.+||+. ++ +. ...+......+..+.+.++|.++++...++.|..||. +++.+..+..
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~ 268 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV 268 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC
Confidence 555 455567899999986 45 32 2222223445678999999988777666788999998 4555544433
Q ss_pred CCCCCCCCcccCCcceEEEEEEc-cCCCeEEEEeCC
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWK-SDSPTMLTANSQ 169 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d 169 (179)
. ...+.+++|. ++++.|++++..
T Consensus 269 ~------------~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 269 P------------GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp S------------CSBEEEEEEESTTSCEEEEEEBC
T ss_pred C------------CCCcEEEEEecCCCCEEEEEecC
Confidence 1 4468999998 888877665543
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=8.6e-08 Score=65.56 Aligned_cols=142 Identities=8% Similarity=-0.004 Sum_probs=93.5
Q ss_pred cCCCceeEEEEcCCCCeEEEEeCC----------Ccee-eecccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCccee
Q 038439 21 DMKANICCVKYNPGSSNYIAKYQS----------TAPC-VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVR 88 (179)
Q Consensus 21 ~~~~~v~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~ 88 (179)
..........|+|+++.++.++.. ++.. +..+...+..+.+.++ .++++...++.|.+|+.. ++. .
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~ 119 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-H 119 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-E
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-E
Confidence 345567889999999767777611 1111 3334556788999999 655555556789999976 443 2
Q ss_pred eecCC-----CCCeEEEEEeeCCCEEEE----ecc-------------CCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 89 TFRGH-----MNEKNFVGLTVNSEYIAC----GSE-------------SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 89 ~~~~~-----~~~v~~~~~~~~~~~~~~----~~~-------------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
.+... ...+..+++.|+|+++++ |.. .+.|..+|..+++......
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~------------- 186 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD------------- 186 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE-------------
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec-------------
Confidence 22211 134567999999998886 432 2457777776665433221
Q ss_pred CcceEEEEEEccCCCeEEEEeCC------CcEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQ------GTIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~ 178 (179)
......++|+|+++.|+.+... +.|.+|++.
T Consensus 187 -~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 187 -LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp -ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred -CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 3356789999999988877665 689999874
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.02 E-value=6.3e-07 Score=60.60 Aligned_cols=161 Identities=7% Similarity=-0.017 Sum_probs=104.4
Q ss_pred CccEEEEEcCCceeEE-eec-CCCceeEEEEcCCCCeEEEEeCC---------Ccee---eecccCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVL-NID-MKANICCVKYNPGSSNYIAKYQS---------TAPC---VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~i~~~~~~~~-~~l 67 (179)
++.|.+||.. ++... .+. ....+.++++.+++..+++.... ++.. .......+..+++.++ ..+
T Consensus 40 ~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 118 (300)
T 2qc5_A 40 ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIW 118 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEE
Confidence 5678888876 44332 122 23578999999998544443211 1111 2223356788888888 666
Q ss_pred EEecCCCcEEEEecCCCccee-eecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 68 ASASTDSTLRLWDVKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
++...++.|..+|.. ++... .+......+..+++.++++.+++...++.|..+|. +++... +.....
T Consensus 119 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~--------- 186 (300)
T 2qc5_A 119 FTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTN--------- 186 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSST---------
T ss_pred EEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCC---------
Confidence 666667889999987 54432 22223456889999999997777766788999998 444332 222111
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...+..+++.++++.+++....+.|.+||.
T Consensus 187 -~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 187 -AAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp -TCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred -CCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 346788999999987766666778888875
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.01 E-value=7.1e-07 Score=60.34 Aligned_cols=161 Identities=5% Similarity=-0.039 Sum_probs=103.3
Q ss_pred CccEEEEEcCCceeEE-eec-CCCceeEEEEcCCCCeEEEEeC---------CCcee---eecccCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVL-NID-MKANICCVKYNPGSSNYIAKYQ---------STAPC---VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~i~~~~~~~~-~~l 67 (179)
++.|..+|.. ++... ... ....+.++++.+++..+++... .++.. +......+..+.+.++ ..+
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEE
Confidence 4667888876 44321 122 3466899999999854444321 12221 2223456778888888 666
Q ss_pred EEecCCCcEEEEecCCCcceee-ecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 68 ASASTDSTLRLWDVKENLPVRT-FRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 68 ~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
++...++.|..+|. +++.... .......+..+++.++|.++++....+.|.+||. +++... ......
T Consensus 161 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~--------- 228 (300)
T 2qc5_A 161 FTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTP--------- 228 (300)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSST---------
T ss_pred EEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCC---------
Confidence 66666788999998 4543321 2223456789999999987777777788999998 444322 211111
Q ss_pred CcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...+..+++.++|+.+++...++.|..||.
T Consensus 229 -~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 229 -NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp -TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred -CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 446789999999986666666788888875
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.01 E-value=2.2e-07 Score=64.19 Aligned_cols=161 Identities=4% Similarity=-0.107 Sum_probs=98.7
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe--------CCCcee-eecc-----cCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY--------QSTAPC-VHGH-----KKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~-~~~~-----~~~i~~~~~~~~-~~l 67 (179)
++.|..||..+++.. .+.....+.+++|+|++..++++. .+++.. +... ...+..+.++|+ .++
T Consensus 70 ~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~ 148 (326)
T 2ghs_A 70 ERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALW 148 (326)
T ss_dssp GTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEE
T ss_pred CCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEE
Confidence 467888888776543 344567899999999995444432 122222 2111 235788999999 655
Q ss_pred EEecC------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcC--CC-cccc--cc-cc
Q 038439 68 ASAST------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKE--IS-KPVT--WH-RF 134 (179)
Q Consensus 68 ~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~--~~-~~~~--~~-~~ 134 (179)
++... .+.|..++ +++. ..+.........++|+|+++.++.+ ..++.|.+||+. ++ +... .+ ..
T Consensus 149 v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~ 225 (326)
T 2ghs_A 149 IGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS 225 (326)
T ss_dssp EEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC
T ss_pred EEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC
Confidence 54432 23455555 4443 3332233456789999999876544 557899999986 44 3211 11 11
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.. . ...+..+++.++|++.++...++.|.+||.
T Consensus 226 ~~---------~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 226 TG---------I-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp TT---------S-SSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CC---------C-CCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 10 0 345678999999987777666788988875
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.99 E-value=2.4e-08 Score=70.32 Aligned_cols=112 Identities=13% Similarity=-0.075 Sum_probs=75.4
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCceeeecccCceeEEEEeeCCeEEEecCCCcEEEEecC
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPCVHGHKKAVSYVKFLSNDELASASTDSTLRLWDVK 82 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~ 82 (179)
++.|.+.|..+++.+.++....... ++++|+|+.++++.. +.+. ..-|..++.|.+||..
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~-----------------~~~r--~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHAST-----------------VFSR--IARGERTDYVEVFDPV 117 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEE-----------------EEEE--TTEEEEEEEEEEECTT
T ss_pred CCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcc-----------------cccc--cccCCCCCEEEEEECC
Confidence 5677777777777777776433333 777777755544410 0000 0012235679999999
Q ss_pred CCcceeeecCCC-------CCeEEEEEeeCCCEEEEecc--CCcEEEEEcCCCcccccccc
Q 038439 83 ENLPVRTFRGHM-------NEKNFVGLTVNSEYIACGSE--SNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 83 ~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~--d~~v~vwd~~~~~~~~~~~~ 134 (179)
+.+.+..+.... .....+.++|||++++++.. ++.|.++|+.+++.+..+..
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 998887764321 24567999999999888764 68999999999998877754
No 218
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.97 E-value=1.5e-07 Score=69.36 Aligned_cols=175 Identities=10% Similarity=-0.011 Sum_probs=104.8
Q ss_pred CCccEEEEEcCCceeEEee--cCCCceeEEEE-c-CCCCeEEEEe-------CCCcee------------eeccc-----
Q 038439 2 AYGKVKVWCTRQEASVLNI--DMKANICCVKY-N-PGSSNYIAKY-------QSTAPC------------VHGHK----- 53 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~--~~~~~v~~~~~-~-~~~~~~~~~~-------~~~~~~------------~~~~~----- 53 (179)
++++|.+.|+.+.++.+.+ .....+..+++ + |++.++++.+ +.++.+ +..-+
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~ 189 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW 189 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE
Confidence 4567889999999887744 44566888888 5 8887777775 111111 11111
Q ss_pred -----CceeEEEEeeC-CeEEEecCCC--------------------------------------cEEEEecCC--Ccc-
Q 038439 54 -----KAVSYVKFLSN-DELASASTDS--------------------------------------TLRLWDVKE--NLP- 86 (179)
Q Consensus 54 -----~~i~~~~~~~~-~~l~~~~~d~--------------------------------------~v~iwd~~~--~~~- 86 (179)
+.-..++++|+ .++++++.+. .|.+.|.++ ++.
T Consensus 190 qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~ 269 (595)
T 1fwx_A 190 QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLF 269 (595)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSS
T ss_pred EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCcee
Confidence 11234667777 6666666442 366777766 433
Q ss_pred eeeecCCCCCeEEEEEeeCCCEEEEec-cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE
Q 038439 87 VRTFRGHMNEKNFVGLTVNSEYIACGS-ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT 165 (179)
Q Consensus 87 ~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 165 (179)
+..+.. .....++.++|||+++++++ .+..|.++|+.+.+....-.+............ ......++|+|+|....+
T Consensus 270 ~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t 347 (595)
T 1fwx_A 270 TRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTS 347 (595)
T ss_dssp EEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEE
T ss_pred EEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEE
Confidence 344432 22456799999999876554 588999999996532100000000000000000 556889999999944445
Q ss_pred EeCCCcEEEEeec
Q 038439 166 ANSQGTIKVLVLA 178 (179)
Q Consensus 166 ~~~dg~i~iwd~~ 178 (179)
.--|+.|.+||+.
T Consensus 348 ~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 348 LFLDSQVVKWNIE 360 (595)
T ss_dssp ETTTTEEEEEEHH
T ss_pred EecCCcEEEEEhh
Confidence 5569999999974
No 219
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=1.5e-07 Score=62.59 Aligned_cols=162 Identities=11% Similarity=0.087 Sum_probs=102.9
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-CeEEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DELAS 69 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~l~~ 69 (179)
..|+++|+++++.+..+............+++..++.+. .+.+.+ +.-.. ....+.++ ..|+.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~ 141 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIM 141 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEE
Confidence 389999999999998887666555444444455665554 222332 21111 11233456 66666
Q ss_pred ecCCCcEEEEecCCCcceeeecCCC-----CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 70 ASTDSTLRLWDVKENLPVRTFRGHM-----NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 70 ~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
+..++.|.++|..+.+.+..+.... ..++.+.|. +|+.++..-.++.|.+.|.++++.+..+.+..-.......
T Consensus 142 SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~ 220 (262)
T 3nol_A 142 SDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPL 220 (262)
T ss_dssp CCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSC
T ss_pred ECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccc
Confidence 6667889999999988887765421 334557776 7876666667889999999999987776653211000000
Q ss_pred cCCcceEEEEEEccCCCeEEEEeCC
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANSQ 169 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~d 169 (179)
.......+.++|+|+++.|++.+..
T Consensus 221 ~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 221 PSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp CSSCCCEEEEEEETTTTEEEEEETT
T ss_pred cCcCCceEEEEEcCCCCEEEEECCC
Confidence 0113467899999998888877753
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.94 E-value=2.8e-07 Score=63.03 Aligned_cols=120 Identities=7% Similarity=0.005 Sum_probs=74.8
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCC----------Ccee-eecc-----cCceeEEEEeeC-C
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQS----------TAPC-VHGH-----KKAVSYVKFLSN-D 65 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~~~-~~~~-----~~~i~~~~~~~~-~ 65 (179)
++.|..|+. +++..........+..++++++|. ++++... ++.. +..+ ...+..+.+.|+ .
T Consensus 66 ~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 66 GRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGA 143 (305)
T ss_dssp TTEEEEEET-TSCEEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSC
T ss_pred CCEEEEEeC-CCCEEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCC
Confidence 567778876 344322223556789999999995 5555311 2211 1111 123567889988 6
Q ss_pred eEEE----ecC-------------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC------CcEEEEE
Q 038439 66 ELAS----AST-------------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES------NEVYVYH 122 (179)
Q Consensus 66 ~l~~----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~v~vwd 122 (179)
.+++ +.. .+.|..+|..+++..... .......++|+|+++.++++... +.|.+|+
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~ 221 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFA 221 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEE
Confidence 6665 432 245777777666543332 33456789999999987776654 6899999
Q ss_pred cCCC
Q 038439 123 KEIS 126 (179)
Q Consensus 123 ~~~~ 126 (179)
+...
T Consensus 222 ~~~~ 225 (305)
T 3dr2_A 222 WRDG 225 (305)
T ss_dssp EETT
T ss_pred ecCC
Confidence 8754
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=1.8e-07 Score=66.77 Aligned_cols=175 Identities=10% Similarity=0.080 Sum_probs=106.9
Q ss_pred CCccEEEEEcCCc----eeEEeec--------CCCceeEEEEcCCCCeEEEEe----------------CCCcee--ee-
Q 038439 2 AYGKVKVWCTRQE----ASVLNID--------MKANICCVKYNPGSSNYIAKY----------------QSTAPC--VH- 50 (179)
Q Consensus 2 ~d~~i~vwd~~~~----~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~----------------~~~~~~--~~- 50 (179)
.+++|.++|+.+. +..+.++ .......+...|+| .++++. .+.+.+ +.
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~ 182 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI 182 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc
Confidence 4678999998755 6666663 12356778889998 444332 112222 11
Q ss_pred -ccc-CceeEEEEeeC-CeEEEec-------------------CCCcEEEEecCCCcceeeecCCC--CCeEEEEE--ee
Q 038439 51 -GHK-KAVSYVKFLSN-DELASAS-------------------TDSTLRLWDVKENLPVRTFRGHM--NEKNFVGL--TV 104 (179)
Q Consensus 51 -~~~-~~i~~~~~~~~-~~l~~~~-------------------~d~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~--~~ 104 (179)
... .--..+.|+|+ +.++++. ....|.+||+.+++.+.++.... .....+.| +|
T Consensus 183 ~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P 262 (462)
T 2ece_A 183 DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP 262 (462)
T ss_dssp BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST
T ss_pred CCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC
Confidence 111 11234778999 7777774 36899999999988787776531 23455666 99
Q ss_pred CCCEEEEec------cCCcEEEEEcCCCccc--cccccCCCCCCCCc-------ccCCcceEEEEEEccCCCeEEEEeC-
Q 038439 105 NSEYIACGS------ESNEVYVYHKEISKPV--TWHRFSSPDMDDTD-------EDAGSYFISAVCWKSDSPTMLTANS- 168 (179)
Q Consensus 105 ~~~~~~~~~------~d~~v~vwd~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~l~~~~~- 168 (179)
+++++++++ .++.|.+|....++.. +.+........... ... ...+..+.+++||++|+++..
T Consensus 263 dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~-~~~pa~I~lS~DGrfLYVSnrg 341 (462)
T 2ece_A 263 TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAV-PPLVTDIDISLDDKFLYLSLWG 341 (462)
T ss_dssp TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEE-CCCCCCEEECTTSCEEEEEETT
T ss_pred CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccC-CCceeEEEECCCCCEEEEEeCC
Confidence 999987776 4568877766543211 11111110000000 000 134677899999999988877
Q ss_pred CCcEEEEeec
Q 038439 169 QGTIKVLVLA 178 (179)
Q Consensus 169 dg~i~iwd~~ 178 (179)
.+.|.+||+.
T Consensus 342 ~d~VavfdV~ 351 (462)
T 2ece_A 342 IGEVRQYDIS 351 (462)
T ss_dssp TTEEEEEECS
T ss_pred CCEEEEEEec
Confidence 6799999974
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.92 E-value=5.9e-07 Score=64.09 Aligned_cols=172 Identities=10% Similarity=0.058 Sum_probs=104.7
Q ss_pred cEEEEEcCCceeEEee----c-CCCceeEEEEcCCCCeEEEEeCCCce----------e-e----e-cccCc--eeEEEE
Q 038439 5 KVKVWCTRQEASVLNI----D-MKANICCVKYNPGSSNYIAKYQSTAP----------C-V----H-GHKKA--VSYVKF 61 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~----~-~~~~v~~~~~~~~~~~~~~~~~~~~~----------~-~----~-~~~~~--i~~~~~ 61 (179)
.|.+++..++.....+ . ....+.+++++|++..++++...++. . + . ++... ...++|
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIY 274 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEE
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEE
Confidence 6777776655433333 2 44668899999954466665421111 1 1 1 11111 128999
Q ss_pred eeC--CeEEEecCCCcEEEEecCCCcceeeecCC---------------CCCeEEEEEeeCCCEEEEec-cCCcEEEEEc
Q 038439 62 LSN--DELASASTDSTLRLWDVKENLPVRTFRGH---------------MNEKNFVGLTVNSEYIACGS-ESNEVYVYHK 123 (179)
Q Consensus 62 ~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~~~~-~d~~v~vwd~ 123 (179)
+|+ .++++-..++.|+.|+.... +..+.++ -.....++++|+|+++++-. .++.|+.||+
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 995 45556667889999987643 2233222 13478899999999877777 7899999998
Q ss_pred CCCccccccccCCC-C-CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 124 EISKPVTWHRFSSP-D-MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 124 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.++........... . .........-.....+++++++.++++-..+++|+.++++
T Consensus 353 ~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 353 LDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 77654322211000 0 0000000002458899999998888888888999988764
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.90 E-value=1.2e-06 Score=61.72 Aligned_cols=160 Identities=6% Similarity=-0.117 Sum_probs=99.9
Q ss_pred cEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC---------CCcee--eeccc------------------Cc
Q 038439 5 KVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ---------STAPC--VHGHK------------------KA 55 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~------------------~~ 55 (179)
+|.++|..+++.+..+...... .++++|+|+.++++.. ....+ +...+ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 8899999999988888755555 9999999987777631 01111 11111 11
Q ss_pred eeEEEEeeC-CeEEEecC--CCcEEEEecCCCcceee-ecCCCCCeEEEEEeeCC-CEEEEeccCCcEEEEEcCCCcccc
Q 038439 56 VSYVKFLSN-DELASAST--DSTLRLWDVKENLPVRT-FRGHMNEKNFVGLTVNS-EYIACGSESNEVYVYHKEISKPVT 130 (179)
Q Consensus 56 i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~vwd~~~~~~~~ 130 (179)
-..+.++|+ ++|+.++. +..|.++| .+++.+.. +.... ++.+.|++ +.+++.+.||.+.++|. +++...
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~ 200 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG 200 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE
Confidence 236889999 77777764 57899999 98888777 54321 24556665 45667778999999999 776653
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
........ ... ........+.+++..++..+.++.+.+.|+
T Consensus 201 ~~~~~~~~-----~~~-~p~~~~~~~~~~~~~~~~~~~~~~v~vid~ 241 (373)
T 2mad_H 201 AGLVGAML-----TAA-QNLLTQPAQANKSGRIVWPVYSGKILQADI 241 (373)
T ss_pred EEeccccc-----cCC-cceeecceeEecCCEEEEEcCCceEEEEec
Confidence 22110000 000 111223456666555554456677777775
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.88 E-value=1.5e-07 Score=71.48 Aligned_cols=162 Identities=7% Similarity=0.104 Sum_probs=95.8
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCC----------c--ee---------------e--ec-c
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQST----------A--PC---------------V--HG-H 52 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----------~--~~---------------~--~~-~ 52 (179)
+..|++||+.+++.+...-.......++|+ |++.++.+.... . .+ + .. |
T Consensus 154 ~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred eEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 357999999998865432111124678999 997777765211 0 01 1 11 2
Q ss_pred cCceeEEEEeeC-CeEEEe-c---CCCcEEEEecCCCc-ceeeecCCCCCeEEEEEeeCCCEEE-EeccC---CcEEEEE
Q 038439 53 KKAVSYVKFLSN-DELASA-S---TDSTLRLWDVKENL-PVRTFRGHMNEKNFVGLTVNSEYIA-CGSES---NEVYVYH 122 (179)
Q Consensus 53 ~~~i~~~~~~~~-~~l~~~-~---~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d---~~v~vwd 122 (179)
...+..+.|+|+ .+|+.. + ....|.++|+.++. ....+..+....... ++++|..|+ ....+ +.|..+|
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 334678899999 665433 2 23589999997763 345555555555444 667666554 44333 6799999
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC---cEEEEeec
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG---TIKVLVLA 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~ 178 (179)
+.++.......+..+ ...+. .|+++++.|+....++ .|++||+.
T Consensus 312 ~~~~~~~~~~~l~~~----------~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 312 AANPGPAHWRDLIPE----------RQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp TTSCCGGGCEEEECC----------CSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred CCCCCccccEEEecC----------CCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 987654111111111 22233 7888898887766543 67888763
No 225
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=2e-06 Score=56.66 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=101.6
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-CeEEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DELAS 69 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~l~~ 69 (179)
..|+.+|+.+++.+..+............+.+..++... .+.+.+ +.-.... ..+ .++ ..|+.
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wgl--t~dg~~L~v 119 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WAL--TSDDSHLYM 119 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEE--EECSSCEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEE--eeCCCEEEE
Confidence 489999999999999887665554443444444665555 233333 2211111 233 456 55655
Q ss_pred ecCCCcEEEEecCCCcceeeecCCC-----CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCc-
Q 038439 70 ASTDSTLRLWDVKENLPVRTFRGHM-----NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTD- 143 (179)
Q Consensus 70 ~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~- 143 (179)
+..++.|.++|..+.+.+..+.-.. ..++.+.+. +|+.++..-.+..|.+.|.++++.+..+.+..-......
T Consensus 120 Sdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~ 198 (243)
T 3mbr_X 120 SDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADAL 198 (243)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSC
T ss_pred ECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccc
Confidence 5668899999999988877775421 234556654 677666655688999999999998777664421110000
Q ss_pred ccCCcceEEEEEEccCCCeEEEEeC
Q 038439 144 EDAGSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
........+.++++|+++.|++.+.
T Consensus 199 ~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 199 TDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cCCcCCceEEEEEcCCCCEEEEECC
Confidence 0011346889999998887777665
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=5.3e-07 Score=60.02 Aligned_cols=163 Identities=9% Similarity=-0.045 Sum_probs=100.4
Q ss_pred CCCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-----------CCCcee--eecccCceeEEEEeeC-Ce
Q 038439 1 MAYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-----------QSTAPC--VHGHKKAVSYVKFLSN-DE 66 (179)
Q Consensus 1 ~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~i~~~~~~~~-~~ 66 (179)
|.+|.|+++|+++++.+..+ ...........+++..++.+. .+.+.+ +.-. ..-..+ .++ ..
T Consensus 72 G~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL--t~Dg~~ 147 (268)
T 3nok_A 72 GHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL--CYWNGK 147 (268)
T ss_dssp TTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE--EEETTE
T ss_pred CCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE--ecCCCE
Confidence 45778999999999988877 555554433333444555554 223333 2211 111223 355 66
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCC-----CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHM-----NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
|+.+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|+.++..-.++.|.+.|.++++.+..+.+..-....
T Consensus 148 L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~ 226 (268)
T 3nok_A 148 LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAV 226 (268)
T ss_dssp EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHH
T ss_pred EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccc
Confidence 6666678899999999988887765421 234567776 7866666656889999999999887666543100000
Q ss_pred C-cccCCcceEEEEEEccCCCeEEEEeC
Q 038439 142 T-DEDAGSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 142 ~-~~~~~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
. .........+.++++|+++.|++.+.
T Consensus 227 ~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 227 AGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 0 00001346789999998777766654
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.85 E-value=1.3e-07 Score=71.65 Aligned_cols=101 Identities=5% Similarity=-0.035 Sum_probs=73.0
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCCCC-----------Ce------------------------EEEEEeeCCCEEE
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGHMN-----------EK------------------------NFVGLTVNSEYIA 110 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----------~v------------------------~~~~~~~~~~~~~ 110 (179)
.++.++.+|.+.++|..+++.+..+..... .+ ..++++|+..+++
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~y 408 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVY 408 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEE
Confidence 578889999999999999988766542110 01 1468899888877
Q ss_pred Eecc-------------------------------------------CCcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 111 CGSE-------------------------------------------SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 111 ~~~~-------------------------------------------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
+... .+.|..||+.+++.+......
T Consensus 409 v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~------------ 476 (677)
T 1kb0_A 409 LPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV------------ 476 (677)
T ss_dssp EEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES------------
T ss_pred EeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC------------
Confidence 6532 267999999999887666542
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
..+....+...+..++.++.||.+++||+++
T Consensus 477 -~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 477 -SPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp -SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred -CCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 2233344556788899999999999999864
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.85 E-value=9.2e-07 Score=59.24 Aligned_cols=154 Identities=8% Similarity=0.024 Sum_probs=97.4
Q ss_pred ceeEEeecCCCc--eeEEEEcCCCCeEEEE-e------------CCCcee--e--ecccCceeEEEEeeCCeEEEecCCC
Q 038439 14 EASVLNIDMKAN--ICCVKYNPGSSNYIAK-Y------------QSTAPC--V--HGHKKAVSYVKFLSNDELASASTDS 74 (179)
Q Consensus 14 ~~~~~~~~~~~~--v~~~~~~~~~~~~~~~-~------------~~~~~~--~--~~~~~~i~~~~~~~~~~l~~~~~d~ 74 (179)
.+.+.++.+... ...++|+|++ .++++ | .+++.+ + ..+ .....+.+..+..+++.-.++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeCCEEEEEEecCC
Confidence 456777777654 6899999987 45544 3 222222 1 111 111234443334455556688
Q ss_pred cEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEE
Q 038439 75 TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAV 154 (179)
Q Consensus 75 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 154 (179)
.+.++|..+.+.+.++..... ....+++||+.++++..++.|.++|..+.+.+......... ..-..++.+
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~-------~p~~~~nel 157 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG-------HRVIRLNEL 157 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT-------EECCCEEEE
T ss_pred EEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC-------cccccceeE
Confidence 999999999988888864311 22446778887777777899999999998877766653210 001236778
Q ss_pred EEccCCCeEEEEeCCCcEEEEeecC
Q 038439 155 CWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 155 ~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.|. ++...+....++.|.+.|.++
T Consensus 158 e~~-dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 158 EYI-NGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp EEE-TTEEEEEETTSSEEEEEETTT
T ss_pred EEE-CCEEEEecCCCCeEEEEECCC
Confidence 887 675555554578899888754
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.79 E-value=1.9e-06 Score=65.46 Aligned_cols=160 Identities=14% Similarity=0.042 Sum_probs=96.8
Q ss_pred ccEEEEEcCCcee--EEeecC----CCceeEEEEcCCCCeEEEEe-C--CCcee--------------eecccCceeEEE
Q 038439 4 GKVKVWCTRQEAS--VLNIDM----KANICCVKYNPGSSNYIAKY-Q--STAPC--------------VHGHKKAVSYVK 60 (179)
Q Consensus 4 ~~i~vwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~~~~~~-~--~~~~~--------------~~~~~~~i~~~~ 60 (179)
..|++|++.+... ...+.. .....++.|+|+|+.+++.. . ....+ +..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 3588898876542 223332 33578899999997776554 1 11111 33333333343
Q ss_pred EeeC-CeE-EEecCC---CcEEEEecCCCcc--eeeecCCCCCeEEEEEeeCCCEEEEecc-CC--cEEEEEcCCCcccc
Q 038439 61 FLSN-DEL-ASASTD---STLRLWDVKENLP--VRTFRGHMNEKNFVGLTVNSEYIACGSE-SN--EVYVYHKEISKPVT 130 (179)
Q Consensus 61 ~~~~-~~l-~~~~~d---~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~vwd~~~~~~~~ 130 (179)
++++ +.| +....+ +.|..+|+.++.. .+.+..+...+. .|+++++.|+.... ++ .|++||+..+. ..
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VR 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eE
Confidence 5555 444 444433 5789999987654 345555555554 89999988776655 43 68899987543 33
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC----CcEEEEeec
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ----GTIKVLVLA 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~ 178 (179)
.+.+.. ...+..+.++++++.++....+ +.+..||+.
T Consensus 364 ~l~~p~-----------~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 364 EVALPG-----------LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EECCSS-----------SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EeecCC-----------CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 332211 3457777888888877666554 788888864
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=3.3e-07 Score=63.76 Aligned_cols=157 Identities=8% Similarity=-0.063 Sum_probs=96.4
Q ss_pred CccEEEEEcCCceeEEeecCC-------CceeEEEEcCCCCeEEEEeC--------------CCcee--eecc-------
Q 038439 3 YGKVKVWCTRQEASVLNIDMK-------ANICCVKYNPGSSNYIAKYQ--------------STAPC--VHGH------- 52 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~--------------~~~~~--~~~~------- 52 (179)
++.|.+||+.+++.+..+... ..+..++++|++..++++.. .++.. +.+|
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 468899999988877666422 34689999986546655521 11111 1111
Q ss_pred ----------------------cCceeEEEEeeC-CeEEEecCCC-cEEEEecC---CCc-----cee--eecCCCCCeE
Q 038439 53 ----------------------KKAVSYVKFLSN-DELASASTDS-TLRLWDVK---ENL-----PVR--TFRGHMNEKN 98 (179)
Q Consensus 53 ----------------------~~~i~~~~~~~~-~~l~~~~~d~-~v~iwd~~---~~~-----~~~--~~~~~~~~v~ 98 (179)
...+..++++|+ +.|+.+...+ .+..++.. .+. ... ...++.....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 012577999999 6777776655 44444421 111 000 1112233456
Q ss_pred EEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCC
Q 038439 99 FVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQG 170 (179)
Q Consensus 99 ~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 170 (179)
.++++++|.++++...++.|.+||..+++........ ....+..+++.+++.++++.+..+
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-----------~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-----------KLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-----------GGSCEEEEEECTTSCEEEEECCGG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-----------ceecCCeeEECCCCcEEEEeCccc
Confidence 7899999999999888999999998555432222110 034588999999988877776443
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=9.2e-06 Score=56.46 Aligned_cols=153 Identities=9% Similarity=0.033 Sum_probs=92.0
Q ss_pred CceeEEEEcCCCCeEEEEeC--CC-cee--ee---------------cccCceeEEEEeeC-CeEEEecC-----CCcEE
Q 038439 24 ANICCVKYNPGSSNYIAKYQ--ST-APC--VH---------------GHKKAVSYVKFLSN-DELASAST-----DSTLR 77 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~--~~-~~~--~~---------------~~~~~i~~~~~~~~-~~l~~~~~-----d~~v~ 77 (179)
..+..++++|+|..+++..+ .+ ..+ +. .+...+..+++.++ .++++-.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 67899999999954444321 11 011 11 13356788999998 44444333 57899
Q ss_pred EEecCCCcceeeecCC------CCCeEEEEEeeCCCE-EEEec---cCCcEEEEEcCCCccccccccC-C--C-CCCCCc
Q 038439 78 LWDVKENLPVRTFRGH------MNEKNFVGLTVNSEY-IACGS---ESNEVYVYHKEISKPVTWHRFS-S--P-DMDDTD 143 (179)
Q Consensus 78 iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-~~~~~---~d~~v~vwd~~~~~~~~~~~~~-~--~-~~~~~~ 143 (179)
+||+.+++.+..+... ...+..+++++++.. +++.. .++.|.+||+.+++........ . + ......
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 9999988866665432 234678999986544 45544 5789999999877654332110 0 0 000000
Q ss_pred cc--------C-----CcceEEEEEEccCCCeEEEEeCCC-cEEEEe
Q 038439 144 ED--------A-----GSYFISAVCWKSDSPTMLTANSQG-TIKVLV 176 (179)
Q Consensus 144 ~~--------~-----~~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd 176 (179)
.+ . -...+..++|+|+++.|+.+..++ .+..++
T Consensus 177 ~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp TTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 00 0 012468899999999888887765 444443
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.66 E-value=4.4e-06 Score=63.48 Aligned_cols=101 Identities=5% Similarity=0.022 Sum_probs=70.6
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCCC-C--------------------------------------CeEEEEEeeCC
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGHM-N--------------------------------------EKNFVGLTVNS 106 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~--------------------------------------~v~~~~~~~~~ 106 (179)
.++.++.+|.+.++|..+++.+....... . .-..++++|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 67888999999999999998774322110 0 00126788887
Q ss_pred CEEEEecc---------------------------------------------CCcEEEEEcCCCccccccccCCCCCCC
Q 038439 107 EYIACGSE---------------------------------------------SNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 107 ~~~~~~~~---------------------------------------------d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
.++++... +|.|..||+.+++.+.......
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~----- 475 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT----- 475 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-----
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-----
Confidence 77776421 3779999999998876655421
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
......+...+..++.++.||.++.||.++
T Consensus 476 --------~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 476 --------IFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp --------SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred --------CccCccceECCCEEEEECCCCcEEEEECCC
Confidence 122234556788899999999999999764
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.65 E-value=1.7e-05 Score=56.80 Aligned_cols=109 Identities=8% Similarity=-0.028 Sum_probs=78.0
Q ss_pred EEEEeeCCeEEEecCC------CcEEEEecCCCcceeeecCCC---CCeEEEEEeeCCCEEEEec---------------
Q 038439 58 YVKFLSNDELASASTD------STLRLWDVKENLPVRTFRGHM---NEKNFVGLTVNSEYIACGS--------------- 113 (179)
Q Consensus 58 ~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~--------------- 113 (179)
.+...|++.++++..+ +.+.+.|..+.+.+.++.... ..-..+.|+|+++.+++..
T Consensus 142 ~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~ 221 (462)
T 2ece_A 142 TVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH 221 (462)
T ss_dssp EEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT
T ss_pred ceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhh
Confidence 3456677766665554 689999999999888886332 2244578899999888874
Q ss_pred ----cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEE--ccCCCeEEEEeC------CCcEEEEe
Q 038439 114 ----ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCW--KSDSPTMLTANS------QGTIKVLV 176 (179)
Q Consensus 114 ----~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~------dg~i~iwd 176 (179)
....|.+||+.+++.+..+..... ......+.| +|+++++++++. +++|.+|.
T Consensus 222 ~~~~~~d~V~v~D~~~~k~~~tI~vg~~----------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 222 LKDRYGNRIHFWDLRKRKRIHSLTLGEE----------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp HHHHSCCEEEEEETTTTEEEEEEESCTT----------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred hhhccCCEEEEEECCCCcEeeEEecCCC----------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 368899999998877776665311 344556656 999999888774 55776654
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=2.8e-05 Score=51.98 Aligned_cols=164 Identities=6% Similarity=-0.072 Sum_probs=96.6
Q ss_pred CccEEEEEcCCceeE-----Eeec-CCCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEee
Q 038439 3 YGKVKVWCTRQEASV-----LNID-MKANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLS 63 (179)
Q Consensus 3 d~~i~vwd~~~~~~~-----~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~ 63 (179)
.+.|+.+++...... ..+. ....+..++|+|++..++.+......+ ..........+++.+
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~ 88 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDH 88 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEET
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEe
Confidence 356777777654321 1111 124578999999776777665111111 222224567889998
Q ss_pred C-CeE-EEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc---CCcEEEEEcCCCccccccccCCCC
Q 038439 64 N-DEL-ASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE---SNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 64 ~-~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
+ +.+ ++-...+.|.++++..................++++|++..++.+.. .+.|..+++..... ..+... .
T Consensus 89 ~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~-~- 165 (267)
T 1npe_A 89 LGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQD-N- 165 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECT-T-
T ss_pred cCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEEC-C-
Confidence 6 554 45456778999998754322222222345789999997665554443 36788888764322 111100 0
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
......+++++++..|+.+. ..+.|.++|+.
T Consensus 166 ---------~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 166 ---------LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp ---------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ---------CCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 33578899999877665555 46788888864
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.60 E-value=9.9e-08 Score=68.19 Aligned_cols=99 Identities=11% Similarity=0.028 Sum_probs=74.5
Q ss_pred CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec----------cCCcEEEEEcCCCccccccccCCCCCCCCc
Q 038439 74 STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS----------ESNEVYVYHKEISKPVTWHRFSSPDMDDTD 143 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 143 (179)
+.|.++|..+.+.+.++.....+ .+.++|||++++++. .++.|.++|..+.+.+..+........
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~--- 173 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF--- 173 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC---
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc---
Confidence 69999999999999888755554 799999999988776 367899999999988777654311000
Q ss_pred ccCCcceEEEEEEccCCCeEEEEeC--CCcEEEEeecC
Q 038439 144 EDAGSYFISAVCWKSDSPTMLTANS--QGTIKVLVLAA 179 (179)
Q Consensus 144 ~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~ 179 (179)
.. ......+.++|||++++++.. ++.|.+.|+.+
T Consensus 174 -~~-g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 174 -LV-GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp -CB-SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred -cc-CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 00 122356889999999999874 57899999764
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.60 E-value=8e-08 Score=67.49 Aligned_cols=106 Identities=8% Similarity=-0.082 Sum_probs=76.6
Q ss_pred eEEEecCCC----cEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec----------cCCcEEEEEcCCCccccc
Q 038439 66 ELASASTDS----TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS----------ESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 66 ~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~vwd~~~~~~~~~ 131 (179)
.+++...++ .|.+.|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 344444444 7889999999999888755555 799999999988876 368899999999998877
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC--CCcEEE--Eeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS--QGTIKV--LVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i--wd~~ 178 (179)
+....... .. . ......+.++|||++++++.. +..+.+ +|+.
T Consensus 112 I~v~~~~~--~~--~-g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 112 IELPDAPR--FS--V-GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEETTSCS--CC--B-SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred EECCCccc--cc--c-CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 76531100 00 0 123456889999999998875 456888 8764
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.58 E-value=3.5e-06 Score=62.24 Aligned_cols=122 Identities=9% Similarity=-0.034 Sum_probs=85.6
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC--------------------------------CC-----
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ--------------------------------ST----- 45 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------------------------------~~----- 45 (179)
++.+.+.|..+.+.+.++...+....++++|+|..++++.. .+
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 56899999999999988886557788999999988877760 00
Q ss_pred --ceeeeccc-------------CceeEEEEeeC-CeE-EEecCCCcEEEEecCCCc------------ceeeecCCCCC
Q 038439 46 --APCVHGHK-------------KAVSYVKFLSN-DEL-ASASTDSTLRLWDVKENL------------PVRTFRGHMNE 96 (179)
Q Consensus 46 --~~~~~~~~-------------~~i~~~~~~~~-~~l-~~~~~d~~v~iwd~~~~~------------~~~~~~~~~~~ 96 (179)
-.++...+ ....++.++|| .++ +++..+.+|.++|+.+.+ ....+. -...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence 00122111 12346889999 554 445568899999998642 223333 2345
Q ss_pred eEEEEEeeCCCEEEEeccCCcEEEEEcCC
Q 038439 97 KNFVGLTVNSEYIACGSESNEVYVYHKEI 125 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~~d~~v~vwd~~~ 125 (179)
...++|+|+|..+++...|++|.+||+..
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 78899999994455667799999999987
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=2.1e-05 Score=52.32 Aligned_cols=152 Identities=13% Similarity=0.081 Sum_probs=92.0
Q ss_pred eeEEeecCCCc--eeEEEEcCCCCeEEEEeC------------CCcee--eecccCceeE--EEEeeCCeEEEecCCCcE
Q 038439 15 ASVLNIDMKAN--ICCVKYNPGSSNYIAKYQ------------STAPC--VHGHKKAVSY--VKFLSNDELASASTDSTL 76 (179)
Q Consensus 15 ~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~i~~--~~~~~~~~l~~~~~d~~v 76 (179)
+.+.++.|... ...+.|+ ++..+.++|. +++.+ +.- ...... +....+..+...-.++.+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEE
Confidence 45566777654 4889998 5644455552 22222 111 112222 333322344444568899
Q ss_pred EEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEE
Q 038439 77 RLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCW 156 (179)
Q Consensus 77 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 156 (179)
.++|..+.+.+.++.... ....+++++..++....++.|.++|..+.+.+......... ..-..++.+.|
T Consensus 110 ~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g-------~~~~~lNELe~ 179 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG-------EELPELNELEW 179 (262)
T ss_dssp EEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-------EECCCEEEEEE
T ss_pred EEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-------ccccccceeEE
Confidence 999999999998887533 22345567887777776888999999998887776653210 00123556777
Q ss_pred ccCCCeEEEEeCCCcEEEEeecC
Q 038439 157 KSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 157 ~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
. +|+..+..-.++.|.+.|.++
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTT
T ss_pred E-CCEEEEEEccCCeEEEEECCC
Confidence 5 666554444577888877653
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.51 E-value=5.1e-06 Score=57.00 Aligned_cols=158 Identities=9% Similarity=-0.000 Sum_probs=95.4
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEe-------CCCcee--eecccCceeEEEEeeCCeEEEec
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKY-------QSTAPC--VHGHKKAVSYVKFLSNDELASAS 71 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~ 71 (179)
.++.|..+|.. ++.+..+. ....+.++...+++. ++++. ..++.+ .......+.++...+++.+..++
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t 232 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGSDKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTS 232 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEESSSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEE
T ss_pred CCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEeCEEEEECCCCcEEEEEccCCcceeceEECCCCeEEEEc
Confidence 35778888877 66655554 234466677767774 44432 122222 22223446666666665677777
Q ss_pred CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceE
Q 038439 72 TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFI 151 (179)
Q Consensus 72 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 151 (179)
.++.+..+|. +++.+..+......+..+...+++ .+..++.++.|..+|. +++....+... ...+
T Consensus 233 ~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~------------~~~~ 297 (330)
T 3hxj_A 233 LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG------------SWII 297 (330)
T ss_dssp TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS------------SCCC
T ss_pred CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC------------Cccc
Confidence 7788888874 455555555443334445555555 4666777888999996 56655444332 2334
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 152 SAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 152 ~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.++...++++ |..++.+|.+++...
T Consensus 298 ~~~~~d~~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 298 ATPVIDENGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp SCCEECTTCC-EEEECTTSCEEEEEC
T ss_pred cceEEcCCCE-EEEEcCCCeEEEEec
Confidence 5566666665 677899999988764
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.49 E-value=2.6e-05 Score=54.70 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=75.4
Q ss_pred CCccEEEEEcCCceeEEeecC----------CCceeEEEEcCCCCeEEEEe----------CCCcee--eecccCceeEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDM----------KANICCVKYNPGSSNYIAKY----------QSTAPC--VHGHKKAVSYV 59 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~i~~~ 59 (179)
.++.|..+|..+++.+..... ...+.+.-...++ .+++.. .+++.+ ...........
T Consensus 61 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p 139 (376)
T 3q7m_A 61 RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGG-HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRP 139 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETT-EEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCC-EEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCC
Confidence 467899999999988766653 2223222222233 455444 233333 11111111111
Q ss_pred EEeeCCeEEEecCCCcEEEEecCCCcceeeecCCCCCe-----EEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 60 KFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEK-----NFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 60 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
. ..++.++.++.++.+..+|..+++.+..+....... ..... .+..++++..++.+..+|.++++.+.....
T Consensus 140 ~-~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 140 V-VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp E-EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEEC
T ss_pred E-EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 1 123678888889999999999998877665432111 11112 245677888899999999999987765543
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.48 E-value=1.5e-05 Score=55.99 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=92.0
Q ss_pred CCccEEEEEcCCceeEEeecCCCc-----------e-eEEEEcCCCCeEEEEe----------CCCceeeecccCceeEE
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKAN-----------I-CCVKYNPGSSNYIAKY----------QSTAPCVHGHKKAVSYV 59 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~-----------v-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~ 59 (179)
.++.|..+|..+++.+.......+ + ...... ++ .+++.+ .+++.+..........+
T Consensus 196 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~~-~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 273 (376)
T 3q7m_A 196 DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-NG-VVFALAYNGNLTALDLRSGQIMWKRELGSVNDF 273 (376)
T ss_dssp TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-TT-EEEEECTTSCEEEEETTTCCEEEEECCCCEEEE
T ss_pred CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-CC-EEEEEecCcEEEEEECCCCcEEeeccCCCCCCc
Confidence 468899999999888766643211 1 011111 22 444443 23333311111222333
Q ss_pred EEeeCCeEEEecCCCcEEEEecCCCcceeeecCC-CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCC
Q 038439 60 KFLSNDELASASTDSTLRLWDVKENLPVRTFRGH-MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPD 138 (179)
Q Consensus 60 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 138 (179)
.. .++.++.++.++.+..+|..+++.+...... ......... .+..+++++.+|.+.++|.++++.+........
T Consensus 274 ~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~- 349 (376)
T 3q7m_A 274 IV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSS- 349 (376)
T ss_dssp EE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTT-
T ss_pred eE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-
Confidence 22 2367788888999999999999877665421 112222222 356788888899999999999988766554211
Q ss_pred CCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 139 MDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
........ .+..|+.++.+|.|+.|+
T Consensus 350 ----------~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 350 ----------GFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ----------CBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ----------cceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 00111111 256788899999999987
No 242
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.48 E-value=2.1e-08 Score=70.58 Aligned_cols=66 Identities=12% Similarity=0.045 Sum_probs=45.5
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccc
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWH 132 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~ 132 (179)
+.+++++.|+.|..||..+++.+..+.. ..+.+..+..++..+++++.|+.|+.||.++++.+..+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 7889999999999999999998887765 44545555667878888889999999999888765443
No 243
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.47 E-value=9.5e-05 Score=50.85 Aligned_cols=165 Identities=9% Similarity=-0.080 Sum_probs=102.7
Q ss_pred CCccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee-----------------eecccCceeEEEEeeC
Q 038439 2 AYGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC-----------------VHGHKKAVSYVKFLSN 64 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~~ 64 (179)
..+.|+..|+.+.+....+.....+..++|++.+..++.+......+ +.........+++.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 34678889988877666666667789999998776777665111111 2112234467888765
Q ss_pred -C-eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc-C-CcEEEEEcCCCccccccccCCCCCC
Q 038439 65 -D-ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE-S-NEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 65 -~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d-~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
+ .+++-...+.|.+.++........+.........+++.|.+..++.... . +.|...++..... ..+... .
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~-~--- 162 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-N--- 162 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECS-S---
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEEC-C---
Confidence 4 4455566788999998754333333333456789999997665554443 2 6788888754322 111110 0
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
-.....+++++++..|+.+.. .+.|..+|+.
T Consensus 163 -------~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 163 -------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp -------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -------CCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 335788999987776666554 5678888763
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.46 E-value=8.1e-05 Score=49.71 Aligned_cols=160 Identities=6% Similarity=-0.090 Sum_probs=92.7
Q ss_pred CccEEEEEcCCceeEEeecC-CCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeC-CeE
Q 038439 3 YGKVKVWCTRQEASVLNIDM-KANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSN-DEL 67 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~-~~l 67 (179)
++.|..++.........+.. ......+++.|++..++++......+ ..........+++.|+ +.+
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNL 136 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEE
T ss_pred CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEE
Confidence 45667777665443333332 25688999999765676665111111 2112234578899996 665
Q ss_pred EEecC---CCcEEEEecCCCcceeee-cCCCCCeEEEEEeeCCCEEE-EeccCCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 68 ASAST---DSTLRLWDVKENLPVRTF-RGHMNEKNFVGLTVNSEYIA-CGSESNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 68 ~~~~~---d~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
+.+.. .+.|..+++.... ...+ .........++++|++..++ +-...+.|.++|+...........
T Consensus 137 yv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-------- 207 (267)
T 1npe_A 137 YWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-------- 207 (267)
T ss_dssp EEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--------
T ss_pred EEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--------
Confidence 55543 3678888876432 2222 22334578899999876655 445568899999976443222211
Q ss_pred cccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
......++.. +..|+.+. ..+.|.++|..
T Consensus 208 -----~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 208 -----LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp -----CCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred -----CCCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 1223455553 44455444 56788888864
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=2.8e-06 Score=56.60 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=76.2
Q ss_pred eeEEEEeeCCeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEE-EEeccCCcEEEEEcCCCcccccccc
Q 038439 56 VSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI-ACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 56 i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
...+.|+.+.++.+.+.++.|+++|+.+++.+..+ - ..........+++..+ +..-.++.+.+||..+.+.+..+..
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 36788875577788888899999999999988877 3 2334443344454444 4445688999999999999888775
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.. . -+.++ ++++.|+.+..++.|.++|.++
T Consensus 135 ~~-----------e--GwGLt--~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 135 SG-----------E--GWGLC--YWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp SS-----------C--CCCEE--EETTEEEEECSSSEEEEECTTT
T ss_pred CC-----------c--eeEEe--cCCCEEEEECCCCEEEEEcCCC
Confidence 31 1 13333 5678888887888999998653
No 246
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00013 Score=51.65 Aligned_cols=163 Identities=7% Similarity=-0.036 Sum_probs=97.2
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeC-C-eEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSN-D-ELA 68 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~-~-~l~ 68 (179)
..|+..++...+....+.....+..++|.+.+..++.+-.....+ +.........+++.+. + +++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 456666766555444445556688999998766777665111111 1111223456777765 4 445
Q ss_pred EecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec-cC-CcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS-ES-NEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
+-...+.|.+.++........+.........+++.|.+..++... .. +.|..+++............
T Consensus 176 ~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----------- 244 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----------- 244 (386)
T ss_dssp EETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-----------
T ss_pred EcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-----------
Confidence 556677888888775443333333345678999999766655443 34 67888887654322221110
Q ss_pred CcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
....+.++++|++..|+.+.. .+.|..+|+.
T Consensus 245 -~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 245 -LFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp -CSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred -CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 335788999987666665544 5678877753
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=1.6e-05 Score=60.30 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=49.1
Q ss_pred CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccC
Q 038439 74 STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFS 135 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~ 135 (179)
+.|..||+.+++.+..+.. ...+....+...+..++.++.|+.+++||.++++.+..+...
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 6799999999988877753 333444556778888888999999999999999998877654
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.39 E-value=0.00018 Score=50.25 Aligned_cols=163 Identities=7% Similarity=-0.044 Sum_probs=96.9
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeC-C-eEE
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSN-D-ELA 68 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~-~-~l~ 68 (179)
..|+..++...+....+.....+..++|++....++.+-.....+ +.........+++.+. + +++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE
Confidence 445666665544444444455688999998776777665111111 1111233457888775 4 445
Q ss_pred EecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEe-ccC-CcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 69 SASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACG-SES-NEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 69 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
+-...+.|.+.++........+.........+++.|.+..++.. ... +.|...++............
T Consensus 133 ~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----------- 201 (349)
T 3v64_C 133 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----------- 201 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS-----------
T ss_pred EcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-----------
Confidence 55667889999987544333333334567899999965555444 444 77888887653322211110
Q ss_pred CcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
....+.++++|++..|+.+.. .+.|..+|+.
T Consensus 202 -~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 202 -LFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp -CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -CCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 335788999987766665544 5678877753
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.35 E-value=1.8e-05 Score=54.23 Aligned_cols=156 Identities=8% Similarity=-0.016 Sum_probs=91.1
Q ss_pred CCccEEEEEcCCceeEEeec-CCCceeEEEEcCCCCeEEEEeC---------CCcee--eecccCceeEEEEeeCCeEEE
Q 038439 2 AYGKVKVWCTRQEASVLNID-MKANICCVKYNPGSSNYIAKYQ---------STAPC--VHGHKKAVSYVKFLSNDELAS 69 (179)
Q Consensus 2 ~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~i~~~~~~~~~~l~~ 69 (179)
.++.|..+|.. ++...... ....+.++...+++. +++... .++.+ .......+.++...+++.+..
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v 192 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYF 192 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEE
T ss_pred cCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEE
Confidence 46778888877 66655554 333456667777774 444431 12332 222233455555555555555
Q ss_pred ecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcc
Q 038439 70 ASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSY 149 (179)
Q Consensus 70 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (179)
++ +.+..+| .+++.+..+......+.++...++|.. ..++.++.+..+|. +++.+..+... ..
T Consensus 193 ~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~------------~~ 255 (330)
T 3hxj_A 193 GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTG------------KR 255 (330)
T ss_dssp ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECS------------SC
T ss_pred Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCC------------CC
Confidence 55 7889999 677766666555556777888877754 44566777888874 44444333321 11
Q ss_pred eEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 150 FISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 150 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.+..+...+++ .|+.++.+|.|..+|.
T Consensus 256 ~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 256 IESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp CCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred ccccceEcCCC-eEEEecCCCCEEEECC
Confidence 12223344444 4667777777877763
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.32 E-value=9.6e-05 Score=56.28 Aligned_cols=75 Identities=7% Similarity=0.091 Sum_probs=55.1
Q ss_pred EEEEeeC-CeEEEecCCCc-------------------EEEEecCCCcceeeecCC--C-------CCeEEEEEeeCCC-
Q 038439 58 YVKFLSN-DELASASTDST-------------------LRLWDVKENLPVRTFRGH--M-------NEKNFVGLTVNSE- 107 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~~d~~-------------------v~iwd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~- 107 (179)
.+.+.|+ +.++.++.++. |..+|..+++.+..++.. . ..........+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5678888 88888887753 999999999988776542 1 1222233344665
Q ss_pred --EEEEeccCCcEEEEEcCCCcccccc
Q 038439 108 --YIACGSESNEVYVYHKEISKPVTWH 132 (179)
Q Consensus 108 --~~~~~~~d~~v~vwd~~~~~~~~~~ 132 (179)
.++.++.+|.++++|.++++.+...
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccc
Confidence 7889999999999999999987443
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.31 E-value=0.0002 Score=47.26 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=90.9
Q ss_pred eeEEeecCCC--ceeEEEEcCCCCeEEEEeCCC-cee--eeccc----------Ccee--EEEEeeCCeEEEecCCCcEE
Q 038439 15 ASVLNIDMKA--NICCVKYNPGSSNYIAKYQST-APC--VHGHK----------KAVS--YVKFLSNDELASASTDSTLR 77 (179)
Q Consensus 15 ~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~-~~~--~~~~~----------~~i~--~~~~~~~~~l~~~~~d~~v~ 77 (179)
+.+.++.|.. -...+.|++ +..+.++|..+ ..+ +.-.+ .... .+....+..+...-.++.+.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 5666777654 467999987 43445555221 111 11111 1111 23333334444555688999
Q ss_pred EEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEc
Q 038439 78 LWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWK 157 (179)
Q Consensus 78 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 157 (179)
++|..+.+.+.++...... ..+.+++..|+++..++.|.++|..+.+.+..+........ -..++.+.|.
T Consensus 89 v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-------~~~lNeLe~~ 158 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-------LDNLNELEWV 158 (243)
T ss_dssp EEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-------CCCEEEEEEE
T ss_pred EEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-------cccceeeEEe
Confidence 9999999999888754322 33446777777666789999999999888777665322000 1245566665
Q ss_pred cCCCeEEEEeCCCcEEEEeecC
Q 038439 158 SDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 158 ~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+|+..+..-.+..|.+.|.++
T Consensus 159 -~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTT
T ss_pred -CCEEEEEECCCCeEEEEECCC
Confidence 565454444566777777653
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.25 E-value=0.00013 Score=55.29 Aligned_cols=101 Identities=6% Similarity=0.029 Sum_probs=67.5
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCCC-----------C-Ce------------------------EEEEEeeCCCEE
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGHM-----------N-EK------------------------NFVGLTVNSEYI 109 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----------~-~v------------------------~~~~~~~~~~~~ 109 (179)
.++.++.+|.+.++|..+++.+...+... . ++ ..++++|+...+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 58888999999999999998774332111 0 00 126777776665
Q ss_pred EEe------------------------------------ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEE
Q 038439 110 ACG------------------------------------SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISA 153 (179)
Q Consensus 110 ~~~------------------------------------~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 153 (179)
++. ..+|.|..||+.+++.+....... ....
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-------------~~~~ 462 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-------------HWNG 462 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-------------SCCC
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-------------CCcC
Confidence 541 123789999999998876655421 1222
Q ss_pred EEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 154 VCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 154 ~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
..+...+.+++.++.||.+++||.++
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ceeEeCCCEEEEECCcccchhhhhhc
Confidence 23344678899999999999999753
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.24 E-value=4.8e-05 Score=56.64 Aligned_cols=101 Identities=10% Similarity=-0.022 Sum_probs=66.6
Q ss_pred eEEEecCCCcEEEEecCCCcceeeecCCC-------------CCe--------------------------EEEEEeeCC
Q 038439 66 ELASASTDSTLRLWDVKENLPVRTFRGHM-------------NEK--------------------------NFVGLTVNS 106 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~ 106 (179)
.++.++.++.+.++|..+++.+..+.... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 35678889999999999998776553211 011 235788877
Q ss_pred CEEEEec-------------------------------------cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcc
Q 038439 107 EYIACGS-------------------------------------ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSY 149 (179)
Q Consensus 107 ~~~~~~~-------------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (179)
..+++.. .++.|..||+.+++.+........
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~------------ 465 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA------------ 465 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC------------
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC------------
Confidence 6766543 347899999999887765543211
Q ss_pred eEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 150 FISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 150 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+........+..++.++.||.++.+|.++
T Consensus 466 -~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 466 -AWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp -CCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred -ccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 11111223466788899999999999754
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.21 E-value=8.3e-06 Score=62.60 Aligned_cols=112 Identities=12% Similarity=0.085 Sum_probs=70.1
Q ss_pred ceeEEEEe-eC-CeEEEec-CC----CcEEEEecCCC-cceee-ecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEE
Q 038439 55 AVSYVKFL-SN-DELASAS-TD----STLRLWDVKEN-LPVRT-FRGHMNEKNFVGLTVNSEYIACGSES-----NEVYV 120 (179)
Q Consensus 55 ~i~~~~~~-~~-~~l~~~~-~d----~~v~iwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~v 120 (179)
.+...+|+ |+ .+++.+. .+ ..|+++|+.++ +.+.. +. .....+.|+|||+.|+....+ ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 99 6666443 22 25999999988 63321 11 113467899999887766654 25778
Q ss_pred EEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC---CCcEEEEeec
Q 038439 121 YHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS---QGTIKVLVLA 178 (179)
Q Consensus 121 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~ 178 (179)
+++.+++.......... . ......+.|+|||++|+..+. ...|.++|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~--------~-~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEH--------N-PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EETTSCGGGCEEEEECC--------C-TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred EECCCCchhcEEEEecC--------C-CceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 88877643211111100 0 234567899999998887653 3457777764
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=0.00062 Score=48.45 Aligned_cols=163 Identities=9% Similarity=-0.062 Sum_probs=101.1
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee-----------------eecccCceeEEEEeeC--
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC-----------------VHGHKKAVSYVKFLSN-- 64 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~~-- 64 (179)
..|+..++........+.....+..++|++.+..++.+-.....+ +.........+++.+.
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~ 171 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 171 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC
Confidence 456666766655544555667789999998766776664111111 2222334567888774
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc--CCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE--SNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
.++++-...+.|.+.++........+.........+++.|.+.+|+.... .+.|...++............
T Consensus 172 ~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~------- 244 (400)
T 3p5b_L 172 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------- 244 (400)
T ss_dssp EEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS-------
T ss_pred ceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC-------
Confidence 45555566788999998765444444434455789999997666555442 367888887654332221110
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
-.....+++++++..|+.+.. .+.|..+|+.
T Consensus 245 -----l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 245 -----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp -----CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -----CCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 245788999987777766654 5678777753
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.17 E-value=0.0002 Score=49.17 Aligned_cols=110 Identities=10% Similarity=-0.020 Sum_probs=70.0
Q ss_pred ceeEEEEee-CCeEEEecCCCcEEEEecCCCcceeeecC-----CCCCeEEEEEee-CCCEEEEecc-------------
Q 038439 55 AVSYVKFLS-NDELASASTDSTLRLWDVKENLPVRTFRG-----HMNEKNFVGLTV-NSEYIACGSE------------- 114 (179)
Q Consensus 55 ~i~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~------------- 114 (179)
....+++.+ ++.|+.+...+.+..+|..+++. ..+.. .......+++.+ +|+++++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 467888987 56666665555688888765432 22211 123467899999 8987766432
Q ss_pred ----CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE-eCCCcEEEEeec
Q 038439 115 ----SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA-NSQGTIKVLVLA 178 (179)
Q Consensus 115 ----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 178 (179)
++.|..+|..+++....... ......++++|+++.|+.+ +..+.|.+|++.
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~-------------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKE-------------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEE-------------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ccCCCceEEEEeCCCCEEEEeccC-------------CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 36688888776653221111 2234668999999866655 556889998864
No 257
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.09 E-value=0.0011 Score=47.64 Aligned_cols=172 Identities=6% Similarity=-0.017 Sum_probs=94.0
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCC----Ccee--eec-----------ccCceeEEEEeeC-C
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQS----TAPC--VHG-----------HKKAVSYVKFLSN-D 65 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~--~~~-----------~~~~i~~~~~~~~-~ 65 (179)
+.|+.+|..+++..........+..++++++|. ++++... ...+ +.. .......+++.|+ +
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G 240 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNG 240 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTC
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCC
Confidence 456666666665544444455689999999996 6655421 1111 111 1122345778884 4
Q ss_pred eEE-EecCCCcEEEEecCCCcceeee-cC-CCCCeEEEEEeeCCCEEE-EeccCCcEEEEEcCC--Cccc--ccccc--C
Q 038439 66 ELA-SASTDSTLRLWDVKENLPVRTF-RG-HMNEKNFVGLTVNSEYIA-CGSESNEVYVYHKEI--SKPV--TWHRF--S 135 (179)
Q Consensus 66 ~l~-~~~~d~~v~iwd~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~~--~~~~--~~~~~--~ 135 (179)
.|. +-..++.|+.+|..++.....+ .. .......++|+|++++|+ +-...+.|..+++.. +... ..+.- .
T Consensus 241 ~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g 320 (433)
T 4hw6_A 241 KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHS 320 (433)
T ss_dssp CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTT
T ss_pred eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCC
Confidence 444 5456778999998866552222 21 122334699999998554 445578899988653 2211 01100 0
Q ss_pred CCCCC-CCcccCCcceEEEEEE---------ccCCCeEEEEeCCCcEEEEe
Q 038439 136 SPDMD-DTDEDAGSYFISAVCW---------KSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 136 ~~~~~-~~~~~~~~~~i~~~~~---------~~~~~~l~~~~~dg~i~iwd 176 (179)
..... .......-.....+++ .++++++++-...+.|+.++
T Consensus 321 ~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 321 SPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp CCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 00000 0000000224677888 66777666666677788776
No 258
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.00091 Score=46.09 Aligned_cols=164 Identities=9% Similarity=0.008 Sum_probs=96.0
Q ss_pred CccEEEEEcCCce--eEEeecCCCceeEEEEcCCCCeEEEEeCCCcee--------------eecccCceeEEEEeeC-C
Q 038439 3 YGKVKVWCTRQEA--SVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--------------VHGHKKAVSYVKFLSN-D 65 (179)
Q Consensus 3 d~~i~vwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~-~ 65 (179)
...|+..++.... ....+..-..+..++|.+.+..++.+-.....+ +.........+++.+. +
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 3567778877653 222222334577899998765676665111111 1111223456788765 4
Q ss_pred -eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec--cCCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 66 -ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS--ESNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 66 -~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
++++-...+.|.++++........+.........+++.|.+.+++... ..+.|...++............
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------- 164 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE------- 164 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS-------
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC-------
Confidence 445556678899999875433333333445678999999766655554 3577888887643322111110
Q ss_pred cccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
-...+.+++++++..|+.+. ..+.|..+|+.
T Consensus 165 -----l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 165 -----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp -----CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -----CCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 33568899999776666654 46678887753
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.06 E-value=0.0002 Score=55.05 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=62.0
Q ss_pred ceeEEEEc-CCCCeEEEEe-CCCc---ee--e--ecc-c---Cc----eeEEEEeeC-CeEEEecCC-----CcEEEEec
Q 038439 25 NICCVKYN-PGSSNYIAKY-QSTA---PC--V--HGH-K---KA----VSYVKFLSN-DELASASTD-----STLRLWDV 81 (179)
Q Consensus 25 ~v~~~~~~-~~~~~~~~~~-~~~~---~~--~--~~~-~---~~----i~~~~~~~~-~~l~~~~~d-----~~v~iwd~ 81 (179)
.+...+|| |||+.++.+. ..+. .+ + .+. . .. ...+.|+|+ +.|+..+.+ ..|..+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57889999 9996555443 1111 12 1 111 1 11 235789999 666666554 25778888
Q ss_pred CCCcc--eeeecC-CCCCeEEEEEeeCCCEEEEecc---CCcEEEEEcCCC
Q 038439 82 KENLP--VRTFRG-HMNEKNFVGLTVNSEYIACGSE---SNEVYVYHKEIS 126 (179)
Q Consensus 82 ~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---d~~v~vwd~~~~ 126 (179)
.++.. ...+.. .......+.|+|||++|+.... ...|.++|+.++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 76542 223322 2234567889999999876542 446888898875
No 260
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=4.7e-05 Score=58.04 Aligned_cols=164 Identities=9% Similarity=-0.071 Sum_probs=90.8
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee----eec-------------ccCceeEEEEeeC-
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC----VHG-------------HKKAVSYVKFLSN- 64 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~-------------~~~~i~~~~~~~~- 64 (179)
.+.|+..++.+.+....+.....+..++|.+.+..++.+-.....| +.+ .......|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 3456677776665544444455678899998776666654111111 111 1112345677654
Q ss_pred -CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc--CCcEEEEEcCCCccccccccCCCCCCC
Q 038439 65 -DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE--SNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 65 -~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
.++++-...+.|.+.++........+.........+++.|.+.+|+.... .+.|..+++............
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~------ 538 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------ 538 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS------
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC------
Confidence 44455556788999998754433333322345678899987655555443 267777776543221111100
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
....+.|+|+|++..|+.+. ..+.|..+++.
T Consensus 539 ------l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 539 ------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp ------CSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred ------CCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 22356788998766555544 45678887763
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.96 E-value=0.0035 Score=48.55 Aligned_cols=162 Identities=9% Similarity=-0.062 Sum_probs=96.4
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeCCCcee-----------------eecccCceeEEEEeeC--
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC-----------------VHGHKKAVSYVKFLSN-- 64 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~~-- 64 (179)
..|+..++...+....+.....+..++|.+....++.+-.....| +.........|++.+.
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~ 483 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 483 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCC
Confidence 345555555544444444556788999998665666654111111 2222334567888766
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc--CCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE--SNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
.++++-...+.|.+.++........+.........|++.|.+.+|+.... .+.|...++............
T Consensus 484 ~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~------- 556 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------- 556 (791)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS-------
T ss_pred cEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC-------
Confidence 44555566789999998754433333334456789999997656555442 367888888654432222110
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEee
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVL 177 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~ 177 (179)
-.....|++.+.+..|+.+.. .+.|..+++
T Consensus 557 -----l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 557 -----IQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp -----CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -----CCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 245788888876666666543 456777665
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.94 E-value=0.0012 Score=43.89 Aligned_cols=120 Identities=9% Similarity=0.165 Sum_probs=80.4
Q ss_pred cccCceeEEEEeeC-CeE-EEecCCCcEEEEecCCCcceeeecC-CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCc
Q 038439 51 GHKKAVSYVKFLSN-DEL-ASASTDSTLRLWDVKENLPVRTFRG-HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 51 ~~~~~i~~~~~~~~-~~l-~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
+-...+..++|.|+ +.| ++...++.|...|.. ++.++.+.- .......+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 44457899999988 544 456678888889987 777776632 23567788999988877776667889999887644
Q ss_pred cc---cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 128 PV---TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 128 ~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.+ ....+... . .........++|+|.++.|+++.......+|.+
T Consensus 103 ~i~~~~~~~~~~~-----~-~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 103 EVKILKKIKIPLQ-----E-SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp CEEEEEEEECCCS-----S-CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred eeeeeeeeccccc-----c-ccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 21 22211100 0 011445789999999988888777655566554
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.00085 Score=48.21 Aligned_cols=141 Identities=9% Similarity=0.024 Sum_probs=80.8
Q ss_pred ceeEEEEcC-CCCeEEEEeCCCc---------ee--eecccCceeEEEEeeC-CeEEEecC-CC----cEEEEecCCCcc
Q 038439 25 NICCVKYNP-GSSNYIAKYQSTA---------PC--VHGHKKAVSYVKFLSN-DELASAST-DS----TLRLWDVKENLP 86 (179)
Q Consensus 25 ~v~~~~~~~-~~~~~~~~~~~~~---------~~--~~~~~~~i~~~~~~~~-~~l~~~~~-d~----~v~iwd~~~~~~ 86 (179)
....++++| ++..++++....+ .+ +.........++++++ +.|+.+.. .+ .+.+.+. .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 457889998 3446666542111 11 2222344667888888 64555443 22 2333343 2222
Q ss_pred e--eeecCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeE
Q 038439 87 V--RTFRGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTM 163 (179)
Q Consensus 87 ~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 163 (179)
. ..+.. ......++++| ++.++++-..++.|..++...+.......... ......++|+|++++|
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----------~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----------SGWEFHIQFHPSGNYA 284 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----------SSCCEEEEECTTSSEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----------CCcceeEEEcCCCCEE
Confidence 1 22221 23356788999 67767776678899999988665422222110 2346789999999955
Q ss_pred EEE-eCCCcEEEEeec
Q 038439 164 LTA-NSQGTIKVLVLA 178 (179)
Q Consensus 164 ~~~-~~dg~i~iwd~~ 178 (179)
+.+ ...+.|..++..
T Consensus 285 yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEECCCCEEEEEeCC
Confidence 554 457788887753
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.0028 Score=45.57 Aligned_cols=121 Identities=4% Similarity=-0.034 Sum_probs=75.8
Q ss_pred ccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEeC---C-Ccee--eecc-----------cCceeEEEEeeC--
Q 038439 4 GKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKYQ---S-TAPC--VHGH-----------KKAVSYVKFLSN-- 64 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~-~~~~--~~~~-----------~~~i~~~~~~~~-- 64 (179)
+.|+.+|..+++.............++|++++..++++.. . ...+ +... ......+++.|+
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g 238 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPING 238 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTC
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCC
Confidence 4677777776655444455567899999999975766652 1 1111 1111 123456788884
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecC-CCCCeEEEEEeeCCCEEE-EeccCCcEEEEEcC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRG-HMNEKNFVGLTVNSEYIA-CGSESNEVYVYHKE 124 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~~~~d~~v~vwd~~ 124 (179)
.++++-..++.|..++...+........ .......++|+|+|++++ +-...+.|..++..
T Consensus 239 ~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 239 ELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4455555678899999876543222221 223467899999999554 44567888888765
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.80 E-value=0.0035 Score=47.04 Aligned_cols=52 Identities=6% Similarity=-0.136 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 115 SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 115 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.|.|..||+.+++.+-......+. . ... ....+..++.++.||.++.||.++
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~-------~-~g~-----~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAV-------W-GGT-----MATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCC-------C-SBC-----EEETTTEEEEECTTSEEEEEETTT
T ss_pred cCeEEEEECCCCCEEeEecCCCCc-------c-Ccc-----eEecCCEEEEECCCCeEEEEECCC
Confidence 467888888888876555432110 0 111 122567788899999999999764
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.77 E-value=0.00062 Score=50.87 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=45.8
Q ss_pred CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccC
Q 038439 72 TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFS 135 (179)
Q Consensus 72 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~ 135 (179)
.++.|..||+.+++.+-+..... ....-.....+..++.++.|+.++.||.++++.+..+...
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 36789999999998876665322 2222222334667888999999999999999998877663
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.75 E-value=0.0039 Score=42.49 Aligned_cols=160 Identities=11% Similarity=0.106 Sum_probs=83.3
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe-C-CCcee--eecccCcee------------EEEEeeCC-
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY-Q-STAPC--VHGHKKAVS------------YVKFLSND- 65 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~i~------------~~~~~~~~- 65 (179)
++.|..||... +....+.....+..+++.+++. ++++. . ....+ +....+.+. .++..+++
T Consensus 52 ~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 129 (306)
T 2p4o_A 52 VGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ 129 (306)
T ss_dssp TTEEEEECTTC-CEEEEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE
T ss_pred CCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc
Confidence 34555555443 2333344456788999999996 54443 1 12122 222222222 22222232
Q ss_pred eEEEecCCCcEEEEecCCCcc-eeee---------cCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCC-Cccccccc
Q 038439 66 ELASASTDSTLRLWDVKENLP-VRTF---------RGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEI-SKPVTWHR 133 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~~-~~~~---------~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~-~~~~~~~~ 133 (179)
.+++-..++.|.++|...++. +... .........+ +|++++++++ ...+.|..+|+.. ++.-....
T Consensus 130 ~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~ 207 (306)
T 2p4o_A 130 YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEI 207 (306)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEE
T ss_pred EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEE
Confidence 344444578888888765421 1100 0111234455 8888766544 5578899999875 32110000
Q ss_pred cCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 134 FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 134 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
+.. ......+++.++|+++++....+.|.++|.
T Consensus 208 ~~~-----------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 208 FVE-----------QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEE-----------SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred Eec-----------cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 000 112455778888887666666778888764
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.74 E-value=0.0014 Score=46.82 Aligned_cols=118 Identities=13% Similarity=0.065 Sum_probs=73.5
Q ss_pred ceeEEEEeeCCeEEEecCCCcEEEEecCCCc------------ceeeecC------CCCCeEEEEEeeC---CCEEEEec
Q 038439 55 AVSYVKFLSNDELASASTDSTLRLWDVKENL------------PVRTFRG------HMNEKNFVGLTVN---SEYIACGS 113 (179)
Q Consensus 55 ~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~------------~~~~~~~------~~~~v~~~~~~~~---~~~~~~~~ 113 (179)
.|..+..+|++.+++...+..|.|-.+..+. ..+.+.- ...+|..+.|+|- +..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 5677888888444444456678887776321 0112221 2467999999995 56799999
Q ss_pred cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe--CCCcEEE
Q 038439 114 ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN--SQGTIKV 174 (179)
Q Consensus 114 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i 174 (179)
.|+.|++||+........ .+............ ...|.+++|.+++-.|+..+ .+|.|+-
T Consensus 147 sD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~-~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPI-VLNKPNNSFGLDAR-VNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TTSCEEEEETTCTTSCCE-EESCCCSEEESCSS-CCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred cCCEEEEEEcccCCCCCc-chhccccccCCCcc-cceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 999999999986332222 12111000000011 25788999999988888855 7787764
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.0017 Score=49.42 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=70.8
Q ss_pred CeEEEecC------CCcEEEEecCCCcceeeecCCC---C----------------------------CeEEEEEeeCCC
Q 038439 65 DELASAST------DSTLRLWDVKENLPVRTFRGHM---N----------------------------EKNFVGLTVNSE 107 (179)
Q Consensus 65 ~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~---~----------------------------~v~~~~~~~~~~ 107 (179)
+.++.+.. ++.|..+|..+++.+..+.... . ....+++.|+..
T Consensus 163 ~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~ 242 (668)
T 1kv9_A 163 GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD 242 (668)
T ss_dssp TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTT
T ss_pred CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCC
Confidence 55555543 5899999999999887664211 0 011367888888
Q ss_pred EEEEeccCC-------------------cEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCC---eEEE
Q 038439 108 YIACGSESN-------------------EVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSP---TMLT 165 (179)
Q Consensus 108 ~~~~~~~d~-------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~~ 165 (179)
.++.+..++ .|..+|.++++.+..+....+..... .. ..+..-..+..+|+ .++.
T Consensus 243 ~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~--~~-~~~~~~~d~~~~G~~~~~v~~ 319 (668)
T 1kv9_A 243 LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF--TA-TQQITLAELNIDGKPRKVLMQ 319 (668)
T ss_dssp EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC--CC-CSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc--cC-CCCcEEEEeccCCcEEEEEEE
Confidence 888887665 39999999999887666532211100 00 12222222333564 6888
Q ss_pred EeCCCcEEEEeecC
Q 038439 166 ANSQGTIKVLVLAA 179 (179)
Q Consensus 166 ~~~dg~i~iwd~~~ 179 (179)
++.+|.++++|.++
T Consensus 320 ~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 320 APKNGFFYVLDRTN 333 (668)
T ss_dssp CCTTSEEEEEETTT
T ss_pred ECCCCEEEEEECCC
Confidence 99999999998653
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.73 E-value=0.0075 Score=45.27 Aligned_cols=174 Identities=13% Similarity=0.112 Sum_probs=96.9
Q ss_pred CccEEEEEc-CCceeEEeecCCCc------------eeEEEEcCCCCe----EEEEe----------CCCcee--ee--c
Q 038439 3 YGKVKVWCT-RQEASVLNIDMKAN------------ICCVKYNPGSSN----YIAKY----------QSTAPC--VH--G 51 (179)
Q Consensus 3 d~~i~vwd~-~~~~~~~~~~~~~~------------v~~~~~~~~~~~----~~~~~----------~~~~~~--~~--~ 51 (179)
++.|.-+|. .+++.+-.+..... ...++++|.+.. +++.. .+++.+ .. .
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~ 151 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSD 151 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCC
Confidence 678888999 89988877653321 123455433323 44443 345554 11 1
Q ss_pred cc--CceeEEEEeeCCeEEEec------CCCcEEEEecCCCcceeeecCCCCC---------------------------
Q 038439 52 HK--KAVSYVKFLSNDELASAS------TDSTLRLWDVKENLPVRTFRGHMNE--------------------------- 96 (179)
Q Consensus 52 ~~--~~i~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~--------------------------- 96 (179)
+. ..+.+--...++.++.++ .++.|+.+|.++++.+-.+......
T Consensus 152 ~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~ 231 (599)
T 1w6s_A 152 IKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWE 231 (599)
T ss_dssp GGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSS
T ss_pred CCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCC
Confidence 10 011110001135566555 3789999999999887665532111
Q ss_pred ----------e-EEEEEeeCCCEEEEeccC----------------CcEEEEEcCCCccccccccCCCCCCCCcccCCcc
Q 038439 97 ----------K-NFVGLTVNSEYIACGSES----------------NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSY 149 (179)
Q Consensus 97 ----------v-~~~~~~~~~~~~~~~~~d----------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (179)
+ ..+++.++...++.+..+ +.|..+|.++++.+-.++...++.-.. .....
T Consensus 232 g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~--d~~~~ 309 (599)
T 1w6s_A 232 GDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDY--AGVNV 309 (599)
T ss_dssp TTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCC--CCCCC
T ss_pred CcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccc--cCCCc
Confidence 0 134566777777776654 379999999999876665543321100 00012
Q ss_pred eEEEEEEc-cCC---CeEEEEeCCCcEEEEeecC
Q 038439 150 FISAVCWK-SDS---PTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 150 ~i~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~ 179 (179)
++. +... .+| ..++.++.+|.++++|.++
T Consensus 310 p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 310 MML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp CEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred cEE-EeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 222 2222 466 4677788899999988653
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.68 E-value=0.0057 Score=42.61 Aligned_cols=163 Identities=8% Similarity=0.088 Sum_probs=97.2
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCC----CCe--EEEEe-CC--Ccee----ee----------c------cc
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPG----SSN--YIAKY-QS--TAPC----VH----------G------HK 53 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~~~~~-~~--~~~~----~~----------~------~~ 53 (179)
++-+.+||+ +++.++.+.. +.++.+..-|. |.. ++++. +. ...+ +. . ..
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 457899999 7888777754 44555555442 111 22222 22 1222 11 0 00
Q ss_pred -CceeEEEE--eeC-C--eEEEecCCCcEEEEecC-------CCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEE
Q 038439 54 -KAVSYVKF--LSN-D--ELASASTDSTLRLWDVK-------ENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 54 -~~i~~~~~--~~~-~--~l~~~~~d~~v~iwd~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~v 120 (179)
..+..+++ +|. + +++....++.+..|++. +.+.++++.. .+.+..+...+....|+.+-++.-|..
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEE
Confidence 23344565 564 3 57777888999999883 3356777764 456788889988889999999877777
Q ss_pred EEcCC-----CccccccccCCCCCCCCcccCCcceEEEEEE--ccCCC-eEEEEe-CCCcEEEEeec
Q 038439 121 YHKEI-----SKPVTWHRFSSPDMDDTDEDAGSYFISAVCW--KSDSP-TMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 121 wd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~-~dg~i~iwd~~ 178 (179)
++.+. .+.+........ ...+..|++ .++++ +|++++ .++...+||.+
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l----------~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHL----------TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSB----------CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EeCCcCCCCCceEEEEecCCcc----------ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 77542 222322211100 335777777 45555 666666 47799999874
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.66 E-value=0.0048 Score=41.09 Aligned_cols=167 Identities=4% Similarity=0.028 Sum_probs=99.5
Q ss_pred CccEEEEEcCCceeEEeecC--CCceeEEEEcCCCCeEEEEe------------CCCc--ee--e------ecccCceeE
Q 038439 3 YGKVKVWCTRQEASVLNIDM--KANICCVKYNPGSSNYIAKY------------QSTA--PC--V------HGHKKAVSY 58 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~------------~~~~--~~--~------~~~~~~i~~ 58 (179)
++.|...|.. ++.+..+.. ......+++.+++ .++++. ..+. .+ . ...+.....
T Consensus 48 ~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG 125 (255)
T 3qqz_A 48 PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG 125 (255)
T ss_dssp TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence 4567777776 777776643 3567888888887 454443 1111 11 1 112344679
Q ss_pred EEEeeC-CeEEEecCCCcEEEEecCC---Ccceeeec-------CCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcCCC
Q 038439 59 VKFLSN-DELASASTDSTLRLWDVKE---NLPVRTFR-------GHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 59 ~~~~~~-~~l~~~~~d~~v~iwd~~~---~~~~~~~~-------~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~~~ 126 (179)
++|.|. +.|+++.......+|.+.. ...+..+. .....+..++++|. +++++.....+.+.++|.. +
T Consensus 126 LA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g 204 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-G 204 (255)
T ss_dssp EEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-C
T ss_pred EEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-C
Confidence 999999 6777777655556665541 11122221 12335678999996 5566666777889999976 5
Q ss_pred ccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
+.+..+.+....... ...-.....++|.++|+ |+..+..+.++.|.
T Consensus 205 ~~~~~~~L~~g~~~l---~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 205 EVIGEMSLTKGSRGL---SHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp CEEEEEECSTTGGGC---SSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred CEEEEEEcCCccCCc---ccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 566555554210000 00023578899999998 55557777777664
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.65 E-value=0.00046 Score=51.46 Aligned_cols=63 Identities=8% Similarity=-0.053 Sum_probs=46.4
Q ss_pred CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccC
Q 038439 72 TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFS 135 (179)
Q Consensus 72 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~ 135 (179)
.++.|..||..+++.+.++... ..+....+...+..+++++.|+.|+.+|.++++.+..+...
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 4578999999999887776532 22222333445667778999999999999999998777654
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.60 E-value=0.0071 Score=41.42 Aligned_cols=130 Identities=9% Similarity=0.036 Sum_probs=73.7
Q ss_pred ceeEEEEcC-CCCeEEEEe----------CCCcee-eec-----ccCceeEEEEee-C-CeEEEecC-------------
Q 038439 25 NICCVKYNP-GSSNYIAKY----------QSTAPC-VHG-----HKKAVSYVKFLS-N-DELASAST------------- 72 (179)
Q Consensus 25 ~v~~~~~~~-~~~~~~~~~----------~~~~~~-~~~-----~~~~i~~~~~~~-~-~~l~~~~~------------- 72 (179)
.+..+++.+ ++ .++++. ..+... +.. .......+++.+ + ..+++-..
T Consensus 81 ~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNN-QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTT-EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCC-cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 478899998 66 566553 111111 111 112357788888 7 55554322
Q ss_pred ----CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccc-cCCCCCCCCcccC
Q 038439 73 ----DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHR-FSSPDMDDTDEDA 146 (179)
Q Consensus 73 ----d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~ 146 (179)
++.|..+|..+++...... .......++++|+++.++++ ...+.|.+|++..... .... +...
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~~~~--------- 228 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVLVKI--------- 228 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEEEEC---------
T ss_pred ccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceEEeC---------
Confidence 3568888876654322221 12334679999999866555 5568899999875321 0000 0000
Q ss_pred CcceEEEEEEccCCCeEEEEeC
Q 038439 147 GSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
.. ...+++.++|++.++...
T Consensus 229 -~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 229 -PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp -SS-EEEEEECTTSCEEEEEEE
T ss_pred -CC-CCCeEECCCCCEEEEecC
Confidence 22 677888888886655433
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.56 E-value=0.0084 Score=41.43 Aligned_cols=116 Identities=8% Similarity=0.027 Sum_probs=76.1
Q ss_pred eeEEEE---eeC-CeEEEec-------------CCCcEEEEecC---CCcceeeecC-------------CCCCeEEEEE
Q 038439 56 VSYVKF---LSN-DELASAS-------------TDSTLRLWDVK---ENLPVRTFRG-------------HMNEKNFVGL 102 (179)
Q Consensus 56 i~~~~~---~~~-~~l~~~~-------------~d~~v~iwd~~---~~~~~~~~~~-------------~~~~v~~~~~ 102 (179)
+..+.| .|+ .++++.. .+..|..+|+. +++.+....- .......++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 467888 466 4444332 25779999998 7766544331 1124778999
Q ss_pred eeCCCEEEEeccC-CcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 103 TVNSEYIACGSES-NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 103 ~~~~~~~~~~~~d-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.++|+..++++.. +.|...+.... .+..+....+. .......+.++++|+++.|++....|.+..+|++
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGN------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCC------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCC------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 9999999988887 87777776543 22222221110 0003346789999999988888779999999864
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.48 E-value=0.01 Score=40.40 Aligned_cols=111 Identities=11% Similarity=0.055 Sum_probs=64.8
Q ss_pred CceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC--CcEEEEEcCCCcccc
Q 038439 54 KAVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES--NEVYVYHKEISKPVT 130 (179)
Q Consensus 54 ~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d--~~v~vwd~~~~~~~~ 130 (179)
.....++|.++ .++++-..++.|..||... +....+. ....+..+++.++|+++++.... ..|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34567788888 6555655778888888764 3333332 23457889999999866654332 246677777776433
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...... ......++..+++..+++-..++.|.++|.
T Consensus 110 ~~~~~~-----------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 110 LLTLPD-----------AIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EEECTT-----------CSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEeCCC-----------ccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 222210 112334444454444444445777777775
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.47 E-value=0.00052 Score=51.27 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 115 SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 115 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
+|.|..||+.+++.+-......+. . ...+ ...+..++.++.||.++.||.++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~-------~-~g~~-----~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPL-------W-AGVL-----ATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC-------C-SCCE-----EETTTEEEEECTTSEEEEEETTT
T ss_pred cceEEEEECCCCCEEEEecCCCCC-------c-ccce-----EeCCCEEEEECCCCcEEEEECCC
Confidence 578999999999877555432110 0 1111 12467788899999999999764
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.46 E-value=0.0049 Score=44.05 Aligned_cols=99 Identities=12% Similarity=0.167 Sum_probs=65.3
Q ss_pred CCcEEEEecCCCcceeeecCC----CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccc------------ccccCC
Q 038439 73 DSTLRLWDVKENLPVRTFRGH----MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVT------------WHRFSS 136 (179)
Q Consensus 73 d~~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~------------~~~~~~ 136 (179)
++.||.-++.....-+.++.. -..+..+..+|+|++++..+ +..|.|-.+..+.... .+....
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 356777776644334444332 23578899999999998876 4578898887332111 122211
Q ss_pred CCCCCCcccCCcceEEEEEEcc---CCCeEEEEeCCCcEEEEeec
Q 038439 137 PDMDDTDEDAGSYFISAVCWKS---DSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 137 ~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~ 178 (179)
. ......+|..+.|+| .+..|++-..|+.|++||+.
T Consensus 119 ~------~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 119 E------EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp C------C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred c------ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 0 000156799999999 45789999999999999985
No 279
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.44 E-value=0.015 Score=41.20 Aligned_cols=139 Identities=5% Similarity=-0.140 Sum_probs=78.9
Q ss_pred ceeEEEEcCCCCeEEEEeCC----------Cce--e-eecccCceeEEEEeeC-CeEEEec-CC-CcEEEEecCCCccee
Q 038439 25 NICCVKYNPGSSNYIAKYQS----------TAP--C-VHGHKKAVSYVKFLSN-DELASAS-TD-STLRLWDVKENLPVR 88 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~~~----------~~~--~-~~~~~~~i~~~~~~~~-~~l~~~~-~d-~~v~iwd~~~~~~~~ 88 (179)
....+++.+.+..++.+-.. +.. . +.........+++.|. +.|+.+. .. +.|...++.......
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 239 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 239 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 45678888766566665411 111 1 2223345678899987 6555443 34 678888876443333
Q ss_pred eecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 89 TFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 89 ~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
...........++++|++..|+.+ ...+.|..+|+............ ......+++ ..+..+++-.
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~------------~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG------------LPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS------------CSSEEEEEE-ETTEEEEEET
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC------------CCCceEEEE-ECCEEEEeeC
Confidence 333334457899999876655544 55678999998754322221110 223556666 3444455555
Q ss_pred CCCcEEEEe
Q 038439 168 SQGTIKVLV 176 (179)
Q Consensus 168 ~dg~i~iwd 176 (179)
..+.|..++
T Consensus 307 ~~~~V~~~~ 315 (386)
T 3v65_B 307 HTKSINSAN 315 (386)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 566777665
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.39 E-value=0.012 Score=42.27 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=76.4
Q ss_pred ceeEEEEcCC--CCeEEEEeCCCc----------ee-eecccCceeEEEEeeC-CeEEEecCCC-----cEEEEecCCCc
Q 038439 25 NICCVKYNPG--SSNYIAKYQSTA----------PC-VHGHKKAVSYVKFLSN-DELASASTDS-----TLRLWDVKENL 85 (179)
Q Consensus 25 ~v~~~~~~~~--~~~~~~~~~~~~----------~~-~~~~~~~i~~~~~~~~-~~l~~~~~d~-----~v~iwd~~~~~ 85 (179)
....++|.|+ +..++++-...+ .. +.........+++.++ + |+.+...+ .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 3678999984 336666532111 11 2222334678888888 6 44443311 12223322111
Q ss_pred c-eeeecCCCCCeEEEEEee-CCCEEEEeccCCcEEEEEcCCCcccc-ccccCCCCCCCCcccCCcceEEEEEEccCCCe
Q 038439 86 P-VRTFRGHMNEKNFVGLTV-NSEYIACGSESNEVYVYHKEISKPVT-WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPT 162 (179)
Q Consensus 86 ~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 162 (179)
. ...+. .......++++| ++.++++-..++.|+.+|..++.... ...... ......++|+|+++.
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-----------~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-----------KGSNFHIVWHPTGDW 286 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-----------CSSCEEEEECTTSSE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-----------CCCcccEEEeCCCCE
Confidence 1 01111 123346688999 67666666677889999988665422 221111 112246999999996
Q ss_pred EEEEe-CCCcEEEEee
Q 038439 163 MLTAN-SQGTIKVLVL 177 (179)
Q Consensus 163 l~~~~-~dg~i~iwd~ 177 (179)
|+.+. ..+.|..+++
T Consensus 287 LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDY 302 (433)
T ss_dssp EEEEETTTTEEEEEEB
T ss_pred EEEEeCCCCEEEEEeC
Confidence 55554 4678888775
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.38 E-value=0.0032 Score=47.72 Aligned_cols=110 Identities=10% Similarity=0.018 Sum_probs=66.9
Q ss_pred EEEEee-C-CeEEEecCCC-----------cEEEEecCCCcce--eeecC-CCCCeEEEEEeeCCCEEEEecc-CCcEEE
Q 038439 58 YVKFLS-N-DELASASTDS-----------TLRLWDVKENLPV--RTFRG-HMNEKNFVGLTVNSEYIACGSE-SNEVYV 120 (179)
Q Consensus 58 ~~~~~~-~-~~l~~~~~d~-----------~v~iwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~-d~~v~v 120 (179)
.+++.+ + ..++.|+.+. .+.+||..+.+.. ..+.. +......+++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455666 5 5666665432 5788998876532 22221 2223345677789999999884 567999
Q ss_pred EEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CC-----CcEEEEeec
Q 038439 121 YHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQ-----GTIKVLVLA 178 (179)
Q Consensus 121 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~ 178 (179)
||+.+.+-........ ...-.+++..++++.++.|+ .+ ..+.+||..
T Consensus 270 yd~~t~~W~~~~~~~~-----------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQV-----------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGGGTEEEECCCCSS-----------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCcCCceeECCCCCc-----------cccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 9998765332211111 11112344557899888888 34 468889875
No 282
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.37 E-value=0.017 Score=40.31 Aligned_cols=140 Identities=5% Similarity=-0.147 Sum_probs=77.8
Q ss_pred CceeEEEEcCCCCeEEEEeC----------CCc--ee-eecccCceeEEEEeeC-CeEEEe-cCC-CcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKYQ----------STA--PC-VHGHKKAVSYVKFLSN-DELASA-STD-STLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~----------~~~--~~-~~~~~~~i~~~~~~~~-~~l~~~-~~d-~~v~iwd~~~~~~~ 87 (179)
.....+++.+.+..++.+-. .+. .. +.........+++.|. +.++.+ ... +.|...++......
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 195 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 34567888876656665541 111 11 2223345678899987 555444 344 67888887643322
Q ss_pred eeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE
Q 038439 88 RTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA 166 (179)
Q Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 166 (179)
..+.........++++|++..|+.+ ...+.|..+|+............ ......+++ ..+..+++-
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~------------~~~P~giav-~~~~ly~td 262 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG------------LPHPFAITV-FEDSLYWTD 262 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------------CSSEEEEEE-ETTEEEEEE
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC------------CCCceEEEE-ECCEEEEec
Confidence 2222334457889999876665544 45678999998754322211110 223455666 334444444
Q ss_pred eCCCcEEEEe
Q 038439 167 NSQGTIKVLV 176 (179)
Q Consensus 167 ~~dg~i~iwd 176 (179)
...+.|..++
T Consensus 263 ~~~~~V~~~~ 272 (349)
T 3v64_C 263 WHTKSINSAN 272 (349)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 4556666655
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.33 E-value=0.03 Score=42.36 Aligned_cols=162 Identities=4% Similarity=-0.082 Sum_probs=97.2
Q ss_pred ccEEEEEcCCceeEEeec--CCCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeC-C-e
Q 038439 4 GKVKVWCTRQEASVLNID--MKANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSN-D-E 66 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~-~-~ 66 (179)
+.|+..++.+.+....+. .-..+..++|++.+..++.+......+ +.........+++.+. + +
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~L 94 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL 94 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEE
Confidence 567777877654433333 334688999999876777765111111 2212234567888765 4 4
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEec--cCCcEEEEEcCCCccccccccCCCCCCCCcc
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGS--ESNEVYVYHKEISKPVTWHRFSSPDMDDTDE 144 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
+++-...+.|.+.++........+...-.....+++.|...+|+... ..+.|...++...........
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~---------- 164 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN---------- 164 (628)
T ss_dssp EEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS----------
T ss_pred EEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC----------
Confidence 45556678899999875433223333445678999999655555444 256777777765443222211
Q ss_pred cCCcceEEEEEEccCCCeEEEEeC-CCcEEEEeec
Q 038439 145 DAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVLA 178 (179)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 178 (179)
......++++++++.|+.+.. .+.|..+|+.
T Consensus 165 ---~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 165 ---VGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp ---CSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ---CCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 345788999987766666554 5677777653
No 284
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.30 E-value=0.037 Score=42.87 Aligned_cols=164 Identities=8% Similarity=0.080 Sum_probs=97.6
Q ss_pred cEEEEEcCCceeEEeec--------CCCceeEEEEcCCCCeEEEEeCCC--------cee--eec-------ccCceeEE
Q 038439 5 KVKVWCTRQEASVLNID--------MKANICCVKYNPGSSNYIAKYQST--------APC--VHG-------HKKAVSYV 59 (179)
Q Consensus 5 ~i~vwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~--------~~~--~~~-------~~~~i~~~ 59 (179)
-|.+||..+++...... ....|.++...++|...+.+-..+ ..+ +.. ....|.++
T Consensus 283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i 362 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCI 362 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEE
T ss_pred hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEE
Confidence 46677766655432211 135699999999985555442111 111 111 13457788
Q ss_pred EEeeCCeEEEecCCCcEEEEecCCCcceeeecC--------CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccc
Q 038439 60 KFLSNDELASASTDSTLRLWDVKENLPVRTFRG--------HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTW 131 (179)
Q Consensus 60 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~ 131 (179)
...+++.|..|+.++-|..||..+++...-... ....|.++...++++.|..|+.++-|..+|.++++....
T Consensus 363 ~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 363 VEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp EECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 766666677788887899999876543221111 135688888888888456667667799999887654322
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
...... .....|.++...+++++.+ |+.+ -+.+||..
T Consensus 443 -~~~~~~-------l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~ 479 (795)
T 4a2l_A 443 -NQRNSQ-------LVNENVYAILPDGEGNLWL-GTLS-ALVRFNPE 479 (795)
T ss_dssp -CTTTSC-------CSCSCEEEEEECSSSCEEE-EESS-CEEEEETT
T ss_pred -ecCCCC-------cCCCeeEEEEECCCCCEEE-EecC-ceeEEeCC
Confidence 111000 0145688898888877554 4444 47777753
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.25 E-value=0.008 Score=41.54 Aligned_cols=124 Identities=9% Similarity=0.081 Sum_probs=74.6
Q ss_pred ccCceeEEEEeeC-CeEEEec-CCCcEEEEecCCCccee-eecC----CC--CCeEEEEE---eeCCCEEEEec------
Q 038439 52 HKKAVSYVKFLSN-DELASAS-TDSTLRLWDVKENLPVR-TFRG----HM--NEKNFVGL---TVNSEYIACGS------ 113 (179)
Q Consensus 52 ~~~~i~~~~~~~~-~~l~~~~-~d~~v~iwd~~~~~~~~-~~~~----~~--~~v~~~~~---~~~~~~~~~~~------ 113 (179)
...--.+++|.+. +.|..++ ..+.|..||...+.... .+.. .. ..+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 3334457889886 6665555 68999999987553322 2221 11 13568899 68887777543
Q ss_pred -------cCCcEEEEEcC---CCccccccccCCCCCC-CCcccCCcceEEEEEEccCCCeEEEEeCC-CcEEEE
Q 038439 114 -------ESNEVYVYHKE---ISKPVTWHRFSSPDMD-DTDEDAGSYFISAVCWKSDSPTMLTANSQ-GTIKVL 175 (179)
Q Consensus 114 -------~d~~v~vwd~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iw 175 (179)
.++.|..+|+. +++.+....+...... ....+........++..++|+..++++.. +.|...
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 26779999999 7777654443211000 00000002358889999999988877766 554443
No 286
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.24 E-value=0.012 Score=38.34 Aligned_cols=137 Identities=13% Similarity=0.102 Sum_probs=72.4
Q ss_pred CceeEEEEcCCCCeEEEEeCCCcee-eec----------ccCce--------eEEEEeeCCeEEEecCCCcEEEEecCCC
Q 038439 24 ANICCVKYNPGSSNYIAKYQSTAPC-VHG----------HKKAV--------SYVKFLSNDELASASTDSTLRLWDVKEN 84 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~i--------~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 84 (179)
..+..++|+|+| .|+++ ..++.. ... -...| .++.|.|++.|..+ .|+.|.-++..+.
T Consensus 41 ~~~~~laf~P~G-~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTS-CEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCS
T ss_pred ccceeEEECCCc-cEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcC
Confidence 467899999988 56665 333322 111 11233 67888888555444 5688887775432
Q ss_pred cce------eee-cCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEc
Q 038439 85 LPV------RTF-RGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWK 157 (179)
Q Consensus 85 ~~~------~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 157 (179)
..- ..+ ...=..+..+.+.|+|.+.++. |+.++-....++....-.... ......+-.....+.|.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~-----~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARA-----TKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC-----EEEESSSGGGEEEEEEC
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccc-----ceeccCCcceEEEEEEC
Confidence 111 111 1111357889999999888776 776543222211110000000 00000002344557799
Q ss_pred cCCCeEEEEeCCCcE
Q 038439 158 SDSPTMLTANSQGTI 172 (179)
Q Consensus 158 ~~~~~l~~~~~dg~i 172 (179)
+++...++. +|.+
T Consensus 191 ~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 191 SVGTLFGVQ--GGKF 203 (236)
T ss_dssp TTSCEEEEE--TTEE
T ss_pred CCCcEEEEe--CCeE
Confidence 998877666 6644
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.16 E-value=0.046 Score=41.26 Aligned_cols=163 Identities=8% Similarity=-0.005 Sum_probs=93.6
Q ss_pred CccEEEEEcCCce--eEEeecCCCceeEEEEcCCCCeEEEEeCCCcee--------------eecccCceeEEEEeeC-C
Q 038439 3 YGKVKVWCTRQEA--SVLNIDMKANICCVKYNPGSSNYIAKYQSTAPC--------------VHGHKKAVSYVKFLSN-D 65 (179)
Q Consensus 3 d~~i~vwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~-~ 65 (179)
.+.|+..++.... .......-..+..++|++.+..++.+-.....+ +.........+++.+. +
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4567777776543 222333455688999999776676664111111 2222245678888885 4
Q ss_pred -eEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc--CCcEEEEEcCCCccccccccCCCCCCCC
Q 038439 66 -ELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE--SNEVYVYHKEISKPVTWHRFSSPDMDDT 142 (179)
Q Consensus 66 -~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 142 (179)
.+++-...+.|.+.++........+.........+++.|.+.+++.... .+.|...++............
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~------- 169 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE------- 169 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-------
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC-------
Confidence 5555566789999998754332333234445678999997555554442 456666666543322211110
Q ss_pred cccCCcceEEEEEEccCCCeEEEEeC-CCcEEEEee
Q 038439 143 DEDAGSYFISAVCWKSDSPTMLTANS-QGTIKVLVL 177 (179)
Q Consensus 143 ~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~ 177 (179)
-...+.+++++++..|+.+.. .+.|..+|+
T Consensus 170 -----~~~P~Glald~~~~~LY~aD~~~~~I~~~~~ 200 (619)
T 3s94_A 170 -----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 200 (619)
T ss_dssp -----CSSEEEEEEETTTTEEEEEETTTCCEEEESS
T ss_pred -----CCCCcEEEEEccCCEEEEEeCCCCeEEEecC
Confidence 335788999987666665543 566777665
No 288
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.15 E-value=0.037 Score=39.90 Aligned_cols=173 Identities=9% Similarity=0.086 Sum_probs=99.9
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee--eeccc----CceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGHK----KAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~----~~i~~~~~~~~-~~ 66 (179)
..++.|+|+++.+.++.+.....|.--.|-.+...-+++. ....|+ +..|. ..|..-..+++ ..
T Consensus 85 g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW 164 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKW 164 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSE
T ss_pred CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCe
Confidence 3578999999999999998888898888866652333333 233444 44332 34545555555 54
Q ss_pred EEEec-------CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCC-----CEEEEecc---CCcEEEEEcCCC-cccc
Q 038439 67 LASAS-------TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNS-----EYIACGSE---SNEVYVYHKEIS-KPVT 130 (179)
Q Consensus 67 l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~---d~~v~vwd~~~~-~~~~ 130 (179)
++..+ -.|.+.+|..+.+ .-+.+.+|..... .+-.+| ..+..+.. .+.+++-++... ....
T Consensus 165 ~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~--~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~ 241 (494)
T 1bpo_A 165 LLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA--QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ 241 (494)
T ss_dssp EEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEE--EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC
T ss_pred EEEEeecccCCcccceEEEeecccc-ccchheeeeeeeE--EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC
Confidence 43222 2467889988754 4556666654332 222222 12332322 278888888543 1101
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.+.-...+..... +.......++..++....++.-+.-|.+++||+++
T Consensus 242 ~f~kk~vdv~fpp-e~~~DFPvamqvs~kygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 242 PFPKKAVDVFFPP-EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp CCCCEEEECCCCT-TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred CccceeeeeeCCc-ccccCceeEEEecccCCEEEEEecCceEEEEeccc
Confidence 1100000000000 11144567789999999999999999999999875
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.14 E-value=0.042 Score=40.27 Aligned_cols=140 Identities=6% Similarity=-0.024 Sum_probs=79.6
Q ss_pred eeEEEEcC-CCCeEEEEeCC----------Ccee--e-ec---ccCceeEEEE-------eeC-CeEEEecCCC------
Q 038439 26 ICCVKYNP-GSSNYIAKYQS----------TAPC--V-HG---HKKAVSYVKF-------LSN-DELASASTDS------ 74 (179)
Q Consensus 26 v~~~~~~~-~~~~~~~~~~~----------~~~~--~-~~---~~~~i~~~~~-------~~~-~~l~~~~~d~------ 74 (179)
...|+|.| ++.+|+++... ...+ + .. .......++| .++ ..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 35567776521 1112 1 11 1224678899 888 6566555443
Q ss_pred -cEEEEecCC-Ccce-----eeecCCCCCeEEEEEeeC-CCEEEEeccCCcEEEEEcC-------CCcc------c----
Q 038439 75 -TLRLWDVKE-NLPV-----RTFRGHMNEKNFVGLTVN-SEYIACGSESNEVYVYHKE-------ISKP------V---- 129 (179)
Q Consensus 75 -~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~vwd~~-------~~~~------~---- 129 (179)
.|.+.+... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++.. .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665333 1221 122211 22356788995 5556666678889999997 4443 0
Q ss_pred --cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE-eCCCcEEEEee
Q 038439 130 --TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA-NSQGTIKVLVL 177 (179)
Q Consensus 130 --~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~ 177 (179)
...... .......++|+|+++.|+.+ +....|+.++.
T Consensus 300 ~~~l~~~~-----------~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTIA-----------DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEECS-----------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEecC-----------CCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 001110 03346789999999965554 45677888654
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.10 E-value=0.032 Score=38.24 Aligned_cols=142 Identities=6% Similarity=-0.135 Sum_probs=79.8
Q ss_pred CceeEEEEcCCCCeEEEEeC----------CCcee---eecccCceeEEEEeeC-CeEEEecC-C-CcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKYQ----------STAPC---VHGHKKAVSYVKFLSN-DELASAST-D-STLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~-d-~~v~iwd~~~~~~~ 87 (179)
..+..+++.+.+..++.+-. .++.. +.........+++.|. +.++.+.. . +.|...++.. ...
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~ 155 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDI 155 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCe
Confidence 34678888875556665531 11111 2223345678889987 65555443 2 6788888753 333
Q ss_pred eee-cCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE
Q 038439 88 RTF-RGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT 165 (179)
Q Consensus 88 ~~~-~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 165 (179)
..+ ...-.....++++|++..|+.+ ...+.|..+|+.............. ......+++. .+..+++
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~----------~~~P~giav~-~~~ly~~ 224 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR----------LAHPFSLAVF-EDKVFWT 224 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT----------TSSEEEEEEE-TTEEEEE
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCc----------cCCcEEEEEE-CCEEEEE
Confidence 333 2234567899999876666554 4567899999875332221111000 2234566664 3444555
Q ss_pred EeCCCcEEEEee
Q 038439 166 ANSQGTIKVLVL 177 (179)
Q Consensus 166 ~~~dg~i~iwd~ 177 (179)
-...+.|..++.
T Consensus 225 d~~~~~V~~~~~ 236 (316)
T 1ijq_A 225 DIINEAIFSANR 236 (316)
T ss_dssp ETTTTEEEEEET
T ss_pred ECCCCeEEEEeC
Confidence 555667777764
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.09 E-value=0.0078 Score=46.04 Aligned_cols=72 Identities=6% Similarity=-0.127 Sum_probs=43.2
Q ss_pred ceeEEEEeeC-CeEEEecC-C-CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEE-EEeccCCcEEEEEcCCC
Q 038439 55 AVSYVKFLSN-DELASAST-D-STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYI-ACGSESNEVYVYHKEIS 126 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~-d-~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~vwd~~~~ 126 (179)
....+++.|. +.|+.+.. . +.|.++++........+.........|+|+|++..| ++-...+.|..+|+...
T Consensus 497 ~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred CcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 3467788886 55544432 2 677777765332222222223446679999875554 45556778999998753
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.97 E-value=0.045 Score=37.72 Aligned_cols=141 Identities=8% Similarity=0.027 Sum_probs=78.7
Q ss_pred CCceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeCCeEEEecCCCcEEEEecCCCcceee
Q 038439 23 KANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRT 89 (179)
Q Consensus 23 ~~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 89 (179)
...+..+.+.|++ .+++++..+..+ -......+..+.+.+++.++.++.++.+.+.+...++.-..
T Consensus 162 ~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 162 IGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp CCCEEEEEECTTS-CEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECC
T ss_pred CcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEe
Confidence 4568899999987 566655222221 11234567788887774455556678777764222322222
Q ss_pred ecC----CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEE
Q 038439 90 FRG----HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLT 165 (179)
Q Consensus 90 ~~~----~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 165 (179)
+.. ....+..+.+.+++..++++. ++.+ .+....++--........ . ...+..+.|.+++ .+++
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~--------~-~~~~~~v~~~~~~-~~~~ 308 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKK--------V-PSNFYKILFFSPD-QGFI 308 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTT--------S-SSCCCEEEEEETT-EEEE
T ss_pred ccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCC--------C-CCCeEEEEEECCC-ceEE
Confidence 221 123478888988877766655 6665 344444443322221100 0 2346777787554 4667
Q ss_pred EeCCCcEEEEe
Q 038439 166 ANSQGTIKVLV 176 (179)
Q Consensus 166 ~~~dg~i~iwd 176 (179)
++.+|.|.-++
T Consensus 309 ~G~~G~i~~~~ 319 (327)
T 2xbg_A 309 LGQKGILLRYV 319 (327)
T ss_dssp ECSTTEEEEEC
T ss_pred EcCCceEEEEc
Confidence 77788877665
No 293
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.97 E-value=0.007 Score=39.36 Aligned_cols=110 Identities=9% Similarity=0.048 Sum_probs=62.6
Q ss_pred CceeEEEEeeCCeEEEecCCCcEEEEecCCCcce------eeecC-CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCC
Q 038439 54 KAVSYVKFLSNDELASASTDSTLRLWDVKENLPV------RTFRG-HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEIS 126 (179)
Q Consensus 54 ~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~ 126 (179)
..++.++|+|++.|... .++.+.-.+..+.... ..+-. .-.....+.|.|+|.+.++ .||.|+-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 46789999999445444 6777666665442211 11100 0011367889999988877 5698877775442
Q ss_pred ccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEE
Q 038439 127 KPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIK 173 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 173 (179)
..-.-... .. ......-..+..+.+.|+|.+.++. |+.++
T Consensus 118 ~~~~Wl~~-a~----~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 118 DTDNWIAR-AT----EVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp TTCCHHHH-SE----EEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCceecc-cc----EeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 22111100 00 0000002467899999999977666 77653
No 294
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.92 E-value=0.051 Score=37.66 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=44.8
Q ss_pred CeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 96 EKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
..-++..++.-..++.-+.-|.+++||++++.++...+.. ...|...+-..+..=++.....|.|.-
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS------------~d~iF~ta~~~~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS------------GETIFVTAPHEATAGIIGVNRKGQVLS 327 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC------------SSCEEEEEEEGGGTEEEEEETTCEEEE
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC------------CCceEEecccCCCCcEEEEcCCCEEEE
Confidence 3456778887778888889999999999999998776654 333443344333333455556665543
No 295
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.86 E-value=0.11 Score=40.39 Aligned_cols=145 Identities=8% Similarity=0.014 Sum_probs=86.5
Q ss_pred CCceeEEEEcCCCCeEEEEe---------CCCcee-ee-c--------ccCceeEEEEeeCCe-EEEecCCCcEEEEecC
Q 038439 23 KANICCVKYNPGSSNYIAKY---------QSTAPC-VH-G--------HKKAVSYVKFLSNDE-LASASTDSTLRLWDVK 82 (179)
Q Consensus 23 ~~~v~~~~~~~~~~~~~~~~---------~~~~~~-~~-~--------~~~~i~~~~~~~~~~-l~~~~~d~~v~iwd~~ 82 (179)
...|.++...++|...+.+. ..++.. +. . ....|.++...+++. |..|+.++-+..+|..
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 34589999998885555442 111111 21 1 134677887766655 7777777779999988
Q ss_pred CCcceeeecC-----CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEc
Q 038439 83 ENLPVRTFRG-----HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWK 157 (179)
Q Consensus 83 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 157 (179)
+++. ..+.. ....|.++...++|++.+... . -+..||..+++.........+. ......|.++...
T Consensus 436 ~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~i~~d 506 (795)
T 4a2l_A 436 SGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGT------PVVSKQITTLFRD 506 (795)
T ss_dssp TCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCC------BCCCCCEEEEEEC
T ss_pred CCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEcccccccc------ccCCceEEEEEEC
Confidence 7653 33321 245688888888887655443 4 4888998876543221110000 0013568889888
Q ss_pred cCCCeEEEEeCCCcEEEEeec
Q 038439 158 SDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 158 ~~~~~l~~~~~dg~i~iwd~~ 178 (179)
++|+..+. +. +-+..||..
T Consensus 507 ~~g~lWig-t~-~Gl~~~~~~ 525 (795)
T 4a2l_A 507 SHKRLWIG-GE-EGLSVFKQE 525 (795)
T ss_dssp TTCCEEEE-ES-SCEEEEEEE
T ss_pred CCCCEEEE-eC-CceEEEeCC
Confidence 88875554 44 447777753
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.83 E-value=0.15 Score=41.53 Aligned_cols=160 Identities=14% Similarity=0.070 Sum_probs=93.0
Q ss_pred ccEEEEEcCCceeEEeec--CCCceeEEE---EcCCCCeEEEEe----C-------CCcee-------------eecccC
Q 038439 4 GKVKVWCTRQEASVLNID--MKANICCVK---YNPGSSNYIAKY----Q-------STAPC-------------VHGHKK 54 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~---~~~~~~~~~~~~----~-------~~~~~-------------~~~~~~ 54 (179)
++|++.|..+.+.+..++ ....+.+++ |..+...++++| . .++.+ -...++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 468899988888776665 444555554 444444677777 1 11111 122345
Q ss_pred ceeEEEEeeCCeEEEecCCCcEEEEecCCCccee-eecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC--Cccccc
Q 038439 55 AVSYVKFLSNDELASASTDSTLRLWDVKENLPVR-TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI--SKPVTW 131 (179)
Q Consensus 55 ~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~--~~~~~~ 131 (179)
++++++-.. ++|++|- ...+++|++...+.++ ....... +..+.....++++++|..-..|.+...+. ++....
T Consensus 887 ~v~al~~~~-g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEFN-GKLLASI-NSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEET-TEEEEEE-TTEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeeeC-CEEEEEc-CCEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 666665332 5555544 4789999998765444 1111111 33334444678899998877777765443 222221
Q ss_pred cccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 132 HRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.. .. ....++++.+-.+ ..++.+..+|.+.+....
T Consensus 964 a~-D~----------~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 964 AR-DF----------NPNWMSAVEILDD-DNFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EE-CC----------SCBCEEEEEEEET-TEEEEEETTSEEEEEEEC
T ss_pred Ee-ec----------ccccEEEEEEEcc-CcEEEEcCCCcEEEEecC
Confidence 11 10 1556888887644 477889999999988654
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.73 E-value=0.13 Score=39.73 Aligned_cols=162 Identities=10% Similarity=0.118 Sum_probs=90.2
Q ss_pred ccEEEEEcCCceeEEee---c-CCCceeEEEEcCCCCeEEEEe---------CCCcee-ee---cccCceeEEEEeeCCe
Q 038439 4 GKVKVWCTRQEASVLNI---D-MKANICCVKYNPGSSNYIAKY---------QSTAPC-VH---GHKKAVSYVKFLSNDE 66 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~~~~---------~~~~~~-~~---~~~~~i~~~~~~~~~~ 66 (179)
+-|..||..+++...-. . ....|.++...+++...+.+. .+++.. +. .....|.++...+++.
T Consensus 383 ~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~ 462 (781)
T 3v9f_A 383 GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK 462 (781)
T ss_dssp SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE
T ss_pred CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC
Confidence 34666665543322111 1 235688999888885444431 112221 21 1235677777666666
Q ss_pred EEEecCCCcEEEEecCCCcceeeecCC-----CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCC
Q 038439 67 LASASTDSTLRLWDVKENLPVRTFRGH-----MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDD 141 (179)
Q Consensus 67 l~~~~~d~~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 141 (179)
+..++. +-+..+|..+++........ ...|.++...++|++.+.....| +..+|..+++... +....
T Consensus 463 lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~----- 534 (781)
T 3v9f_A 463 IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYE----- 534 (781)
T ss_dssp EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTT-----
T ss_pred EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCC-----
Confidence 666666 56888998765543322211 35688888888887665443344 7778887654322 21110
Q ss_pred CcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 142 TDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.-....|.++...++|+..+ ++.+|-+..||.
T Consensus 535 ---~l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~ 566 (781)
T 3v9f_A 535 ---GFCSNTINQIYRSSKGQMWL-ATGEGLVCFPSA 566 (781)
T ss_dssp ---TCSCSCEEEEEECTTSCEEE-EETTEEEEESCT
T ss_pred ---CCCCCeeEEEEECCCCCEEE-EECCCceEEECC
Confidence 00145688888888887544 444664466664
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.63 E-value=0.047 Score=38.14 Aligned_cols=104 Identities=12% Similarity=-0.029 Sum_probs=58.8
Q ss_pred CceeEEEEeeCCeEEEecCCCcEEEEecCCCc-ceeeec---CCCCCeEEEEEeeC---CCEEEEecc----C----CcE
Q 038439 54 KAVSYVKFLSNDELASASTDSTLRLWDVKENL-PVRTFR---GHMNEKNFVGLTVN---SEYIACGSE----S----NEV 118 (179)
Q Consensus 54 ~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~~~~~----d----~~v 118 (179)
..-..++|.|++.++.+..++.|+++| .+++ .+..+. ........++++|+ +..|+++.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 445788999995566666679999887 3443 222211 12345788999997 445544432 2 567
Q ss_pred EEEEcCCCc--c---ccccc-cCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 119 YVYHKEISK--P---VTWHR-FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 119 ~vwd~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
..++..... . ...+. .... . ......+.|.|+|.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~-------~--~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGA-------Y--IHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECC-------S--SCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCC-------C--CcCCceEEECCCCcEEEEEC
Confidence 777766431 1 00011 1000 0 12245689999998666543
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.54 E-value=0.13 Score=37.18 Aligned_cols=160 Identities=13% Similarity=0.126 Sum_probs=97.0
Q ss_pred CccEEEEEcCC-ceeEEeecC-----CCceeEEEEcCCCCeEEEEe---------------CCCcee---eecccCceeE
Q 038439 3 YGKVKVWCTRQ-EASVLNIDM-----KANICCVKYNPGSSNYIAKY---------------QSTAPC---VHGHKKAVSY 58 (179)
Q Consensus 3 d~~i~vwd~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~---------------~~~~~~---~~~~~~~i~~ 58 (179)
+..|+-|++.. ..+++.++. ...|-.-..+++.+.++.+| ...+.+ +.+|-+....
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ 203 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEE
Confidence 56789999864 456666652 45677788889998888887 111111 6666555444
Q ss_pred EEEeeC----CeEEEecC---CCcEEEEecCCC---c------ceeeecC---CCCCeEEEEEeeCCCEEEEeccCCcEE
Q 038439 59 VKFLSN----DELASAST---DSTLRLWDVKEN---L------PVRTFRG---HMNEKNFVGLTVNSEYIACGSESNEVY 119 (179)
Q Consensus 59 ~~~~~~----~~l~~~~~---d~~v~iwd~~~~---~------~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~d~~v~ 119 (179)
+....+ ..+..+.. .+.++|-++... . .+..+.. ......++..++.-..++.-+.-|.++
T Consensus 204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~ 283 (494)
T 1bpo_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (494)
T ss_dssp EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEE
Confidence 433222 23444433 268888888542 1 1111111 123455788888878888889999999
Q ss_pred EEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 120 VYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 120 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
+||++++.++...+.. ...|...+-..+..=++.....|.|.-
T Consensus 284 lyDleTgt~i~~nrIs------------~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 284 LYDLETGTCIYMNRIS------------GETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EEETTTCCEEEEEECC------------SSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred EEecccceeeeeeccc------------CCceEEecccCCCCcEEEEccCceEEE
Confidence 9999999998776654 334444444444444555556665543
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.51 E-value=0.13 Score=36.63 Aligned_cols=142 Identities=6% Similarity=-0.174 Sum_probs=80.1
Q ss_pred CceeEEEEcCCCCeEEEEeCC----------Ccee---eecccCceeEEEEeeC-CeEEEecC--CCcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKYQS----------TAPC---VHGHKKAVSYVKFLSN-DELASAST--DSTLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~ 87 (179)
..+..+++.+.+..++.+-.. +... +.........|++.|. +.|+.+.. .+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 456788888755566665411 1111 2223334678889887 66655542 367888887654333
Q ss_pred eeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE
Q 038439 88 RTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA 166 (179)
Q Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 166 (179)
..+.........+++++++..|+.+ ...+.|..+|+.............. ......++.. .+..+++-
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~----------l~~P~gl~v~-~~~lywtd 307 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR----------LAHPFSLAVF-EDKVFWTD 307 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST----------TSSEEEEEEE-TTEEEEEE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC----------CCCCEEEEEe-CCEEEEec
Confidence 3333334567899999877666655 4567899999875433222211100 1234455552 33444444
Q ss_pred eCCCcEEEEe
Q 038439 167 NSQGTIKVLV 176 (179)
Q Consensus 167 ~~dg~i~iwd 176 (179)
...+.|..+|
T Consensus 308 ~~~~~V~~~~ 317 (400)
T 3p5b_L 308 IINEAIFSAN 317 (400)
T ss_dssp SSSCSEEEEE
T ss_pred CCCCeEEEEE
Confidence 4556676665
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.2 Score=38.74 Aligned_cols=160 Identities=12% Similarity=0.062 Sum_probs=88.0
Q ss_pred ccEEEEEcCCceeEEeec----CCCceeEEEEcCCCCeEEEEe--------CCCcee-eec-c-----cCceeEEEEeeC
Q 038439 4 GKVKVWCTRQEASVLNID----MKANICCVKYNPGSSNYIAKY--------QSTAPC-VHG-H-----KKAVSYVKFLSN 64 (179)
Q Consensus 4 ~~i~vwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~--------~~~~~~-~~~-~-----~~~i~~~~~~~~ 64 (179)
+-|..+|..+++.. .+. ....|.++...+++...+++. ..++.. +.. . ...|.++...++
T Consensus 427 ~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 427 GNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp EEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT
T ss_pred CCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCC
Confidence 34566666555432 222 235689999888884444432 111111 111 1 346778876666
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecC----CCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCC
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRG----HMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
+.+..|+..+-+..+|..+++ ...+.. ....|.++...++|.+.++.. .|.+..||..+++... +.....
T Consensus 506 g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~-~~~~~g--- 579 (781)
T 3v9f_A 506 GRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV-FQRKEG--- 579 (781)
T ss_dssp CCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEE-ECGGGT---
T ss_pred CCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEE-ccccCC---
Confidence 666666664457778876654 333321 234678888888888665544 6655888887664321 111100
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
-....|.++...++|++.+ ++.+| |..|+.
T Consensus 580 -----l~~~~i~~i~~d~~g~lW~-~t~~G-l~~~~~ 609 (781)
T 3v9f_A 580 -----LPNTHIRAISEDKNGNIWA-STNTG-ISCYIT 609 (781)
T ss_dssp -----CSCCCCCEEEECSSSCEEE-ECSSC-EEEEET
T ss_pred -----CCCceEEEEEECCCCCEEE-EcCCc-eEEEEC
Confidence 0033567777777777444 44555 555553
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.062 Score=39.39 Aligned_cols=113 Identities=13% Similarity=0.171 Sum_probs=66.6
Q ss_pred ceeEEEEee-C-CeE-EEecCCCcEEEEecCCCcceeeecCC---CCCeEEEEE-------eeCCCEEEEeccCC-----
Q 038439 55 AVSYVKFLS-N-DEL-ASASTDSTLRLWDVKENLPVRTFRGH---MNEKNFVGL-------TVNSEYIACGSESN----- 116 (179)
Q Consensus 55 ~i~~~~~~~-~-~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~~~~~~d~----- 116 (179)
....|+|.| + +.| ++-...+.|++.|+..+......... ......++| ++++++++++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356889998 4 444 44444567899998876654433321 235789999 99999666665443
Q ss_pred --cEEEEEcCC-Ccccc-c--cccCCCCCCCCcccCCcceEEEEEEccCC-CeEEEEeCCCcEEEEeec
Q 038439 117 --EVYVYHKEI-SKPVT-W--HRFSSPDMDDTDEDAGSYFISAVCWKSDS-PTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 117 --~v~vwd~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~ 178 (179)
.|.+++... +.... . ..+.. ......++.+|++ .++++-..++.|..+|+.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-----------~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-----------YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-----------ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CceEEEEecCCCCceeecccceeecc-----------CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 266666443 22210 0 00100 1234567889954 545556667889998864
No 303
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.45 E-value=0.11 Score=42.99 Aligned_cols=175 Identities=9% Similarity=0.072 Sum_probs=96.2
Q ss_pred CccEEEEEcCCceeEEeecCCCceeEEEEcCCCCeEEEEe---------CCCcee--eecc----cCceeEEEEeeC-Ce
Q 038439 3 YGKVKVWCTRQEASVLNIDMKANICCVKYNPGSSNYIAKY---------QSTAPC--VHGH----KKAVSYVKFLSN-DE 66 (179)
Q Consensus 3 d~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~--~~~~----~~~i~~~~~~~~-~~ 66 (179)
..++.|+|+++.+.++.+....+|.--.|-.....-+++. ....|+ +..| ...|..-..+++ ..
T Consensus 85 g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW 164 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKW 164 (1630)
T ss_pred CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCe
Confidence 3578888888888888888888888888866553334443 233444 3333 344555555666 44
Q ss_pred EEE-e------cCCCcEEEEecCCCcceeeecCCCCCeEEEEEe--eCC-CEEEEec---cCCcEEEEEcCCC-cccccc
Q 038439 67 LAS-A------STDSTLRLWDVKENLPVRTFRGHMNEKNFVGLT--VNS-EYIACGS---ESNEVYVYHKEIS-KPVTWH 132 (179)
Q Consensus 67 l~~-~------~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~---~d~~v~vwd~~~~-~~~~~~ 132 (179)
++. | .-.|.+.+|..+.+ .-+.+.+|......+... +.. ..+..+. ..+.++|-++... .....+
T Consensus 165 ~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f 243 (1630)
T 1xi4_A 165 LLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (1630)
T ss_pred EEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC
Confidence 432 2 23578889987753 234445554333222221 111 1222111 1267888887543 111111
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeecC
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 179 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 179 (179)
.-...+........ ......+..++....++..+.-|.+++||+.|
T Consensus 244 ~kk~~~~~~~~~~~-~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 244 PKKAVDVFFPPEAQ-NDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred ccccccccCCcccc-cCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 11100000000011 33456788888888999999999999999875
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.33 E-value=0.15 Score=35.60 Aligned_cols=111 Identities=13% Similarity=0.165 Sum_probs=70.5
Q ss_pred CceeEEEEeeC-C-------eEEEecC---CCcEEEEecC-CCcceeeecC-------CCCCeEEEEE--eeC-CC-EEE
Q 038439 54 KAVSYVKFLSN-D-------ELASAST---DSTLRLWDVK-ENLPVRTFRG-------HMNEKNFVGL--TVN-SE-YIA 110 (179)
Q Consensus 54 ~~i~~~~~~~~-~-------~l~~~~~---d~~v~iwd~~-~~~~~~~~~~-------~~~~v~~~~~--~~~-~~-~~~ 110 (179)
+.++.+..-|. . +.++... +.+|++|++. ....+..+.. ....+..+++ +|. +. +++
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yaf 147 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAM 147 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEE
Confidence 56677776665 2 3333333 5789999773 2223444421 1144566777 664 44 577
Q ss_pred EeccCCcEEEEEcCC-------CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 111 CGSESNEVYVYHKEI-------SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 111 ~~~~d~~v~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
+...+|.+..|++.. .+.+..+.+ ...+..+...+....|+.+-.+.-|..++.
T Consensus 148 V~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 148 VTGKEGEFEQYELKADKNGYISGKKVRAFKM-------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EECSSSEEEEEEEEECTTSCEEEEEEEEEEC-------------SSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred EECCCCeEEEEEEEeCCCCcccceEEEEecC-------------CCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence 888899999999842 344555554 446778888888888999988866555553
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.26 E-value=0.077 Score=37.02 Aligned_cols=104 Identities=13% Similarity=0.072 Sum_probs=57.5
Q ss_pred CceeEEEEeeCCeEEEecCCCcEEEEecCCCcc--eeeec---CCCCCeEEEEEeeC---CCEEEEecc-C-----CcEE
Q 038439 54 KAVSYVKFLSNDELASASTDSTLRLWDVKENLP--VRTFR---GHMNEKNFVGLTVN---SEYIACGSE-S-----NEVY 119 (179)
Q Consensus 54 ~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~~~~~~-d-----~~v~ 119 (179)
..-..++|.|++.++.+...+.|++++ .++. +..+. ........++++|+ +..|+++.. . +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 345688899984355556668888888 3332 11111 12346788999998 555554433 2 5677
Q ss_pred EEEcCCCccc---cccc-cCCCCCCCCcccCCcceEEEEEEccCCCeEEEE
Q 038439 120 VYHKEISKPV---TWHR-FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA 166 (179)
Q Consensus 120 vwd~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 166 (179)
.++....... ..+. ..... . . ......++|.|+|.+.++.
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~----~-~--~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARP----H-G--LHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCT----T-C--CCCCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCC----C-C--CcCCceEEECCCCCEEEEE
Confidence 7887643210 0111 11000 0 0 1223578999999765553
No 306
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.16 E-value=0.18 Score=34.69 Aligned_cols=140 Identities=5% Similarity=-0.154 Sum_probs=77.6
Q ss_pred ceeEEEEcCCCCeEEEEeC----------CCce--e-eecccCceeEEEEeeC-CeEEEecC--CCcEEEEecCCCccee
Q 038439 25 NICCVKYNPGSSNYIAKYQ----------STAP--C-VHGHKKAVSYVKFLSN-DELASAST--DSTLRLWDVKENLPVR 88 (179)
Q Consensus 25 ~v~~~~~~~~~~~~~~~~~----------~~~~--~-~~~~~~~i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~~ 88 (179)
.+..+++.+.+..++.+-. .+.. . ..........+++.|. +.++.+.. .+.|...++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 4556888875556665531 1111 1 2233344578899987 76665552 5678888876433222
Q ss_pred eecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 89 TFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 89 ~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
.+...-.....++++|++..|+.+ ...+.|..+|+.......... .. ......+++.. +..+++-.
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~----------~~~P~glav~~-~~lywtd~ 226 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK--GS----------LPHPFALTLFE-DILYWTDW 226 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SC----------CSCEEEEEEET-TEEEEEET
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec--CC----------CCCceEEEEeC-CEEEEEec
Confidence 223334456889999976665544 556889999987533222111 00 22345566542 33444444
Q ss_pred CCCcEEEEee
Q 038439 168 SQGTIKVLVL 177 (179)
Q Consensus 168 ~dg~i~iwd~ 177 (179)
..+.|..++.
T Consensus 227 ~~~~V~~~~~ 236 (318)
T 3sov_A 227 STHSILACNK 236 (318)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEEC
Confidence 4566766664
No 307
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.93 E-value=0.43 Score=37.25 Aligned_cols=105 Identities=6% Similarity=-0.167 Sum_probs=65.7
Q ss_pred CceeEEEEcCCCCeEEEEeCC----------Ccee---eecccCceeEEEEeeC-CeEEEecC--CCcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKYQS----------TAPC---VHGHKKAVSYVKFLSN-DELASAST--DSTLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~ 87 (179)
..+..|++.+.+.+|+.+-.. +... +.........|++.|. +.|+.+.. .+.|.+.++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 446788888877666666511 1111 2233345678999987 66665543 267888887654433
Q ss_pred eeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCcc
Q 038439 88 RTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKP 128 (179)
Q Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~ 128 (179)
..+.........|++.+.+..|+.+ ...+.|...++.....
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 3344344567899999876666555 4467899999865443
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.79 E-value=0.3 Score=34.25 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=82.1
Q ss_pred CCccEEEEEcCCce-eEEeec--C------CCceeEEEEcC--CCC-eEEEEeCC--------------Ccee-----ee
Q 038439 2 AYGKVKVWCTRQEA-SVLNID--M------KANICCVKYNP--GSS-NYIAKYQS--------------TAPC-----VH 50 (179)
Q Consensus 2 ~d~~i~vwd~~~~~-~~~~~~--~------~~~v~~~~~~~--~~~-~~~~~~~~--------------~~~~-----~~ 50 (179)
.+|.|.++|..+.. ....+. . .-....+.+.+ ++. +++++-.. +... +.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 47899999987421 112222 1 13577777765 343 45555310 1111 11
Q ss_pred c-ccCceeEEEEeeC-CeEEEecC-----------------CCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEE
Q 038439 51 G-HKKAVSYVKFLSN-DELASAST-----------------DSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIAC 111 (179)
Q Consensus 51 ~-~~~~i~~~~~~~~-~~l~~~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 111 (179)
+ .-...+.+.+.++ +++++... .+.|.-+|. ++ +..+...-...+.++|+||++.+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEE
Confidence 1 1234678888888 55555431 133444443 33 2333233345688999999988766
Q ss_pred e-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEcc-CCCeEEEEe
Q 038439 112 G-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKS-DSPTMLTAN 167 (179)
Q Consensus 112 ~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 167 (179)
+ +..+.|..|++.....+...+.-.. ....-.++..+ +|++.+++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~~~----------~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVLSF----------DTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEEC----------SSEEEEEEECTTTCCEEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEEeC----------CCCCceEEEeCCCCcEEEEec
Confidence 5 4578899999874222211111000 34567788888 588766554
No 309
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.79 E-value=0.044 Score=40.75 Aligned_cols=81 Identities=6% Similarity=0.002 Sum_probs=50.3
Q ss_pred eEEEEEeeCCCEEEEec-cCCcEEEEEcCCCccccccccCCC-CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 97 KNFVGLTVNSEYIACGS-ESNEVYVYHKEISKPVTWHRFSSP-DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~-~d~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
...+..+|||+++++++ .+..+.++|.+.......-.+..+ .......+. .......+|.++|+...+.--|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEE
Confidence 45688999999977655 488999999885322110000000 000000011 456788999999966666667999999
Q ss_pred Eeec
Q 038439 175 LVLA 178 (179)
Q Consensus 175 wd~~ 178 (179)
|++.
T Consensus 404 Wni~ 407 (638)
T 3sbq_A 404 WNME 407 (638)
T ss_dssp EEHH
T ss_pred Eecc
Confidence 9974
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.63 E-value=0.32 Score=33.44 Aligned_cols=137 Identities=10% Similarity=0.032 Sum_probs=73.2
Q ss_pred CceeEEEEcCCCCeEEEEeCC---------Ccee---eecccCceeEEEEeeC-CeEEEecCCCcEEEEec--CCCccee
Q 038439 24 ANICCVKYNPGSSNYIAKYQS---------TAPC---VHGHKKAVSYVKFLSN-DELASASTDSTLRLWDV--KENLPVR 88 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~--~~~~~~~ 88 (179)
..+..+.+.+++ .+++++.. ++.. .......+..+.+.|+ ..++.+......+-.|- .+-+.+.
T Consensus 122 ~~~~~i~~~~~~-~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 122 GSPRLIKALGNG-SAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp SCEEEEEEEETT-EEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CCeEEEEEECCC-CEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC
Confidence 456778877666 55555521 2222 2233456788888888 55555544443444442 2222221
Q ss_pred eecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC
Q 038439 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 89 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
......+..+.+.++++.+++ +.+|.+.+.+...++.......... .. ...+..+.+.+++..++++.
T Consensus 201 --~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~-------~~-~~~~~~v~~~~~~~~~~~g~- 268 (327)
T 2xbg_A 201 --RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLR-------RN-SVGFLDLAYRTPNEVWLAGG- 268 (327)
T ss_dssp --CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTS-------SC-CSCEEEEEESSSSCEEEEES-
T ss_pred --CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcc-------cC-CcceEEEEecCCCEEEEEeC-
Confidence 223456788889898876654 4567777664222332222111100 00 23578888988777666554
Q ss_pred CCcEE
Q 038439 169 QGTIK 173 (179)
Q Consensus 169 dg~i~ 173 (179)
+|.+.
T Consensus 269 ~g~i~ 273 (327)
T 2xbg_A 269 AGALL 273 (327)
T ss_dssp TTCEE
T ss_pred CCeEE
Confidence 55553
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.47 E-value=0.35 Score=33.78 Aligned_cols=108 Identities=14% Similarity=0.066 Sum_probs=58.8
Q ss_pred ccCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcc--eeee----cCCCCCeEEEEEeeC---CCEEEEe---ccCCcE
Q 038439 52 HKKAVSYVKFLSN-DELASASTDSTLRLWDVKENLP--VRTF----RGHMNEKNFVGLTVN---SEYIACG---SESNEV 118 (179)
Q Consensus 52 ~~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~~~~~---~~d~~v 118 (179)
.-..-..|+|.|+ ..+++-...+.|++++...++. +..+ .........++++|+ +..|++. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3445678999999 6555554488999888655443 2111 122456788999995 3344332 234455
Q ss_pred EEEEcCCCcc----c----cccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 119 YVYHKEISKP----V----TWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 119 ~vwd~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
.-|.+..+.. + ..+. ..+. .. .+....+.|.|+|.+.++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~-~~p~-----~~--~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFR-GIPK-----GV--IHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEE-EECC-----CS--SCCCCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEE-cCCC-----CC--CccCccccCCCCCCEEEEEC
Confidence 5565554211 0 0000 0000 01 22345689999998666644
No 312
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.45 E-value=0.81 Score=38.31 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=77.0
Q ss_pred CccEEEEEcCC-ceeEEeec-C----CCceeEEEEcCCCCeEEEEe---CC------------Ccee---eecccCceeE
Q 038439 3 YGKVKVWCTRQ-EASVLNID-M----KANICCVKYNPGSSNYIAKY---QS------------TAPC---VHGHKKAVSY 58 (179)
Q Consensus 3 d~~i~vwd~~~-~~~~~~~~-~----~~~v~~~~~~~~~~~~~~~~---~~------------~~~~---~~~~~~~i~~ 58 (179)
+..|.-|++.. ..+++.++ | ...|-.-.-+++.+.++.+| .. .+.+ +.||-+....
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~ 203 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ 203 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhhe
Confidence 46788888863 34444443 2 35577777788888888877 11 1111 4555554444
Q ss_pred EEEeeC----CeEEEecC---CCcEEEEecCCC---ccee------eecC---CCCCeEEEEEeeCCCEEEEeccCCcEE
Q 038439 59 VKFLSN----DELASAST---DSTLRLWDVKEN---LPVR------TFRG---HMNEKNFVGLTVNSEYIACGSESNEVY 119 (179)
Q Consensus 59 ~~~~~~----~~l~~~~~---d~~v~iwd~~~~---~~~~------~~~~---~~~~v~~~~~~~~~~~~~~~~~d~~v~ 119 (179)
+..... ..+..+.. .+.++|-++... .+.. .+.. ......++..++.-..++.-+.-|.++
T Consensus 204 ~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~ 283 (1630)
T 1xi4_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (1630)
T ss_pred eccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEE
Confidence 433211 22222222 267888887542 1111 1111 122334677777777788888899999
Q ss_pred EEEcCCCccccccccC
Q 038439 120 VYHKEISKPVTWHRFS 135 (179)
Q Consensus 120 vwd~~~~~~~~~~~~~ 135 (179)
++|+.++.++...+..
T Consensus 284 ~~d~~t~~~i~~~ris 299 (1630)
T 1xi4_A 284 LYDLETGTCIYMNRIS 299 (1630)
T ss_pred EEecccchhhhhcccc
Confidence 9999999887665543
No 313
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.42 E-value=0.1 Score=39.59 Aligned_cols=84 Identities=8% Similarity=-0.082 Sum_probs=48.4
Q ss_pred cEEEEecCCCcceeee--cCCCCC-eEEEEEeeCCCEEEEeccC-----------CcEEEEEcCCCccccccccCCCCCC
Q 038439 75 TLRLWDVKENLPVRTF--RGHMNE-KNFVGLTVNSEYIACGSES-----------NEVYVYHKEISKPVTWHRFSSPDMD 140 (179)
Q Consensus 75 ~v~iwd~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~~~~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~ 140 (179)
.+.+||..+.+..... ..+... -.++...|+++.++.|+.+ ..+.+||..+.+-........+
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~--- 509 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV--- 509 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC---
T ss_pred EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc---
Confidence 5778887765433222 112222 2345567899999998864 4689999987653221111111
Q ss_pred CCcccCCcceEEEEEEccCCCeEEEEeC
Q 038439 141 DTDEDAGSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
........+.|+++.++.|+.
T Consensus 510 -------R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 -------RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp -------CCTTEEEEECTTSCEEEEECC
T ss_pred -------cccccHhhcCCCcEEEecCCC
Confidence 111123445689999999885
No 314
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.16 E-value=0.61 Score=33.83 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=54.3
Q ss_pred ceeEEEEeeC-CeEEEecCCCcEEEEecCCCcc--eeeecC------CCCCeEEEEEeeC---CCEEEEecc--------
Q 038439 55 AVSYVKFLSN-DELASASTDSTLRLWDVKENLP--VRTFRG------HMNEKNFVGLTVN---SEYIACGSE-------- 114 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~~~~~~~-------- 114 (179)
.-..|+|.|+ +++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4467888888 5444433334677776544432 122211 2345678999995 445444332
Q ss_pred -----CCcEEEEEcCCCc--c---ccccc-cCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeC
Q 038439 115 -----SNEVYVYHKEISK--P---VTWHR-FSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANS 168 (179)
Q Consensus 115 -----d~~v~vwd~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 168 (179)
...|.-+++.... . ...+. +.. .. .+....++|.|+|.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-------~~--~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-------SK--DHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-------CS--SCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCC-------CC--CCCCCeEeECCCCeEEEEECC
Confidence 1345555553321 1 11111 110 01 235788999999987766543
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.00 E-value=0.49 Score=31.86 Aligned_cols=91 Identities=11% Similarity=0.074 Sum_probs=46.7
Q ss_pred CcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCccccccccCCCCCCCCcccC
Q 038439 74 STLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWHRFSSPDMDDTDEDA 146 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 146 (179)
..+.+||+.+.+-.. .+.........+ ..++++++.|+.+ ..+.+||+.+.+-.........
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~--------- 241 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC--------- 241 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC---------
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc---------
Confidence 357888987654322 111111111222 2367777787764 4688999987653322111110
Q ss_pred CcceEEEEEEccCCCeEEEEeCCC-----cEEEEeec
Q 038439 147 GSYFISAVCWKSDSPTMLTANSQG-----TIKVLVLA 178 (179)
Q Consensus 147 ~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 178 (179)
......+. .+++.++.|+.++ .+.+||++
T Consensus 242 -r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 242 -RRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp -CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred -cccCeEEE--ECCEEEEECCcCCCcccccEEEEcCC
Confidence 11111122 2667777777653 48888875
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.98 E-value=0.49 Score=31.80 Aligned_cols=102 Identities=11% Similarity=0.053 Sum_probs=51.2
Q ss_pred CeEEEecCC-----CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCcccccccc
Q 038439 65 DELASASTD-----STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 65 ~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~~~ 134 (179)
..++.|+.+ ..+.+||+.+.+-...-..............++..++.|+.+ ..+.+||+.+.+-......
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 455555543 457888887654322111111111111222367777777764 4689999987654322111
Q ss_pred CCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
..+ ......+.+ +++.++.|+.+ ..+.+||++
T Consensus 241 p~~----------r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 241 TTP----------RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp SSC----------CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETT
T ss_pred CCc----------ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCC
Confidence 111 111112222 56677777665 357778765
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.94 E-value=0.035 Score=38.59 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=43.1
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCC-CCCeEEEEEe--e-CCCEEEEe-ccCCcEEEEEcCCCccc
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGH-MNEKNFVGLT--V-NSEYIACG-SESNEVYVYHKEISKPV 129 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~~~~~-~~d~~v~vwd~~~~~~~ 129 (179)
+.++.++.||.|.-.|..+|+.+-+++.. ..++....-. + ++..++.. ..||.|..++..++...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 57889999999999999999988887653 1222211100 1 22333343 57999999998887543
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.86 E-value=0.64 Score=32.57 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=55.0
Q ss_pred CCcEEEEecCCCc----ceeeecCC-CCCeEEEEEeeCCCEEEEecc-----------------CCcEEEEEcCCCcccc
Q 038439 73 DSTLRLWDVKENL----PVRTFRGH-MNEKNFVGLTVNSEYIACGSE-----------------SNEVYVYHKEISKPVT 130 (179)
Q Consensus 73 d~~v~iwd~~~~~----~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-----------------d~~v~vwd~~~~~~~~ 130 (179)
+..+.+|++.... .+.++.+. -...+.+.+.++|+++++... .|.|.-+|. ++...
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~ 215 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRV 215 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEE
Confidence 4567777765432 22334332 235788999999998777541 233444443 22111
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe-CCCcEEEEeec
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN-SQGTIKVLVLA 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 178 (179)
...- -...+.++|+||++.|+.+. ..+.|..|++.
T Consensus 216 ~~~~-------------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 216 VAEG-------------FDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEE-------------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred eecC-------------CcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 1110 33578999999998877665 47789999874
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.34 E-value=1.6 Score=34.91 Aligned_cols=39 Identities=8% Similarity=-0.125 Sum_probs=32.5
Q ss_pred CeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 96 EKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
.+.++...++..++++-+.|+.+++|++.+++++....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 456677777888999999999999999999988776544
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.10 E-value=0.66 Score=32.39 Aligned_cols=74 Identities=8% Similarity=0.035 Sum_probs=43.2
Q ss_pred CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEEeC--
Q 038439 94 MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTANS-- 168 (179)
Q Consensus 94 ~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~-- 168 (179)
-.....++|.|+|+++++ ..++.|+++|. .++ ....... .. .........++++|+ +..|+++..
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~-v~------~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK-KLVASFD-VA------NVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE-EEEEECC-CC------CSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc-eEeeccc-ee------ecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 445788999999985554 55699998873 443 1111111 00 001345789999997 555555443
Q ss_pred --C----CcEEEEee
Q 038439 169 --Q----GTIKVLVL 177 (179)
Q Consensus 169 --d----g~i~iwd~ 177 (179)
+ +.|..|++
T Consensus 98 ~~~~~~~~~v~r~~~ 112 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRL 112 (354)
T ss_dssp CGGGCEEEEEEEEEE
T ss_pred CCCCCcceEEEEEEE
Confidence 2 45666654
No 321
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.09 E-value=0.64 Score=32.37 Aligned_cols=74 Identities=7% Similarity=0.107 Sum_probs=44.0
Q ss_pred CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEEeCC-
Q 038439 94 MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTANSQ- 169 (179)
Q Consensus 94 ~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d- 169 (179)
-.....++|.|+|+++++ ...+.|.+++ .++........ . . .........++++|+ +..|+++...
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~-v-----~-~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS-V-----Y-HRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC-C-----C-CSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce-E-----e-ecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 445689999999986555 5569999888 34321111111 0 0 001346789999998 5555554432
Q ss_pred -----CcEEEEee
Q 038439 170 -----GTIKVLVL 177 (179)
Q Consensus 170 -----g~i~iwd~ 177 (179)
+.|..|++
T Consensus 100 ~~~~~~~v~r~~~ 112 (352)
T 2ism_A 100 EGGLRNQVVRLRH 112 (352)
T ss_dssp TTSSEEEEEEEEE
T ss_pred CCCCccEEEEEEe
Confidence 55666654
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.00 E-value=1.5 Score=33.28 Aligned_cols=138 Identities=6% Similarity=-0.164 Sum_probs=78.8
Q ss_pred CceeEEEEcCCCCeEEEEeCC----------Cc--ee-eecccCceeEEEEeeC-CeEEEecC--CCcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKYQS----------TA--PC-VHGHKKAVSYVKFLSN-DELASAST--DSTLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~----------~~--~~-~~~~~~~i~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~ 87 (179)
..+..+++.+.+.+++.+-.. +. .+ +...-.....+++.|. +.|+.+.. .+.|...++.....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~- 158 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER- 158 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-
Confidence 346788888766566666411 11 11 2233344578899987 66665542 46777777764433
Q ss_pred eeecCCCCCeEEEEEeeCCCEEEEe-ccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE
Q 038439 88 RTFRGHMNEKNFVGLTVNSEYIACG-SESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA 166 (179)
Q Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 166 (179)
..+-........+++++++..|+.+ ...+.|...|+..... ..+... ......+++.. +..+++-
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~------------l~~P~glav~~-~~ly~tD 224 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD------------LPHPFGLTQYQ-DYIYWTD 224 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC------------CSCEEEEEEET-TEEEEEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc------------CCCceEEEEEC-CEEEEec
Confidence 3332345567899999976666555 4567899999876443 221110 22345666654 3333333
Q ss_pred eCCCcEEEEe
Q 038439 167 NSQGTIKVLV 176 (179)
Q Consensus 167 ~~dg~i~iwd 176 (179)
...+.|...|
T Consensus 225 ~~~~~I~~~d 234 (628)
T 4a0p_A 225 WSRRSIERAN 234 (628)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEE
Confidence 3456666665
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.80 E-value=0.28 Score=34.15 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=38.6
Q ss_pred CeEEEecCCCcEEEEecCCCcceeeecCCCC-C------eEEEEEe-----eCCCEEEEeccCCcEEEEEcCCCc
Q 038439 65 DELASASTDSTLRLWDVKENLPVRTFRGHMN-E------KNFVGLT-----VNSEYIACGSESNEVYVYHKEISK 127 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~------v~~~~~~-----~~~~~~~~~~~d~~v~vwd~~~~~ 127 (179)
+.+++++.++.+...|+++|+.+..+..... . ..+.... ..+..++.+..+..+.+.+ ++++
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC
Confidence 6788999999999999999999888864311 0 0011110 1235677777677676666 4443
No 324
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.77 E-value=1.7 Score=32.98 Aligned_cols=142 Identities=8% Similarity=0.019 Sum_probs=82.3
Q ss_pred CceeEEEEcCCCCeEEEEeCCCcee-------------eecccCceeEEEEeeC--CeEEEecCCCcEEEEecCCCccee
Q 038439 24 ANICCVKYNPGSSNYIAKYQSTAPC-------------VHGHKKAVSYVKFLSN--DELASASTDSTLRLWDVKENLPVR 88 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~ 88 (179)
..+.+++|.+.+..++.+-.....+ +.........+++.+. +++.+-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 4578899998665666664111111 2222234567888764 455565667889999887543322
Q ss_pred eecCCCCCeEEEEEeeCCCEEEEec--cCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEE
Q 038439 89 TFRGHMNEKNFVGLTVNSEYIACGS--ESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTA 166 (179)
Q Consensus 89 ~~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 166 (179)
.+...-...+.+++.|...+++... ..+.|...++...... .+... . -...+.+++.+++..|+.+
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~-~l~~~-~----------l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV-VLVNT-S----------LGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECS-S----------CSCEEEEEEETTTTEEEEE
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE-EEEeC-C----------CCCCeeeEEcccCCEEEEE
Confidence 3333445678999999744444433 2356666666543222 11110 0 3356788898876666665
Q ss_pred eC-CCcEEEEee
Q 038439 167 NS-QGTIKVLVL 177 (179)
Q Consensus 167 ~~-dg~i~iwd~ 177 (179)
.. .+.|..+++
T Consensus 497 D~~~~~I~~~~~ 508 (619)
T 3s94_A 497 DAKTDKIEVMNT 508 (619)
T ss_dssp ETTTTEEEEEES
T ss_pred ECCCCEEEEEec
Confidence 54 456777665
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.56 E-value=1.3 Score=30.98 Aligned_cols=71 Identities=6% Similarity=0.051 Sum_probs=43.3
Q ss_pred eecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC---CCeEEE
Q 038439 89 TFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLT 165 (179)
Q Consensus 89 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~ 165 (179)
.+...-...+.|+|.|+|+++++--..|.|++++...++........... ..+......++++|+ ..+|+.
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~------~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVS------PSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC------CBTTBSEEEEEECTTHHHHCEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCcee------ecCCCCceeeEeccccccCCEEEE
Confidence 34334456789999999997777665899999887655432111111000 011456889999985 444544
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.49 E-value=1.2 Score=30.98 Aligned_cols=70 Identities=16% Similarity=0.018 Sum_probs=39.4
Q ss_pred ceeEEEEeeC-CeEEEecCCCcEEEEecCCCcc---eeee----cCCCCCeEEEEEeeC---CCEEEEec-c-------C
Q 038439 55 AVSYVKFLSN-DELASASTDSTLRLWDVKENLP---VRTF----RGHMNEKNFVGLTVN---SEYIACGS-E-------S 115 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~~~~~~-~-------d 115 (179)
.-..|+|.|+ +.++.+...+.|++++.. ++. +..+ .........++++|+ +..|++.. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4567888888 525555667888888743 321 1111 112345678999995 44444432 2 2
Q ss_pred CcEEEEEcCC
Q 038439 116 NEVYVYHKEI 125 (179)
Q Consensus 116 ~~v~vwd~~~ 125 (179)
..|..+++..
T Consensus 98 ~~v~r~~~~~ 107 (353)
T 2g8s_A 98 TAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEECT
T ss_pred eEEEEEEECC
Confidence 3466666643
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.29 E-value=1.2 Score=29.90 Aligned_cols=100 Identities=13% Similarity=0.071 Sum_probs=49.3
Q ss_pred CeEEEecCCC-----cEEEEecCCCcceee--ecCCCCCeEEEEEeeCCCEEEEeccC-------CcEEEEEcCCCcccc
Q 038439 65 DELASASTDS-----TLRLWDVKENLPVRT--FRGHMNEKNFVGLTVNSEYIACGSES-------NEVYVYHKEISKPVT 130 (179)
Q Consensus 65 ~~l~~~~~d~-----~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-------~~v~vwd~~~~~~~~ 130 (179)
..++.|+.++ .+.+||+.+.+-... +....... ++. ..+++.++.|+.+ ..+.+||+.+.+-..
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 4555555442 467888876543221 11111111 122 2367777777643 358899988765332
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
....... ......+.+ +++.++.|+.+ ..+.+||++
T Consensus 188 ~~~~p~~----------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 188 IAEMSTR----------RSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp ECCCSSC----------CBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETT
T ss_pred CCCCccc----------cccccEEEE--CCEEEEECCCCCCcccceEEEEeCC
Confidence 2111110 111111222 56777777654 357888865
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.20 E-value=1.3 Score=29.95 Aligned_cols=100 Identities=9% Similarity=-0.023 Sum_probs=50.9
Q ss_pred CeEEEecCC-----CcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCcccccc
Q 038439 65 DELASASTD-----STLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWH 132 (179)
Q Consensus 65 ~~l~~~~~d-----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~ 132 (179)
..++.|+.+ ..+.+||+.+.+-.. .+.........+. -+++.++.|+.+ ..+.+||+.+.+-....
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 555555543 458888887654221 1111111122222 267777777764 56899999876533221
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
....+ ......+.+ +++.++.|+.+ ..+.+||++
T Consensus 248 ~~p~~----------r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 248 PMKHR----------RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp CCSSC----------CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCCCC----------ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCC
Confidence 11110 111111222 56777777653 357788865
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.17 E-value=1.3 Score=29.85 Aligned_cols=93 Identities=14% Similarity=0.064 Sum_probs=46.6
Q ss_pred CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCccccccccCCCCCCCCcccCCc
Q 038439 74 STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGS 148 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (179)
..+.+||+.+.+-...-.............-+++.++.|+.+ ..+.+||+.+.+-...-..... .
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------r 238 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK----------G 238 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC----------B
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC----------c
Confidence 457888988754222111111111111122267777777653 4588999887653322111110 1
Q ss_pred ceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 149 YFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 149 ~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
.....+.+ +++.++.|+.+ ..+.+||+.
T Consensus 239 ~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 239 VTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp SCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred cceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 11122222 66777777754 467888865
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.02 E-value=1.8 Score=31.43 Aligned_cols=70 Identities=9% Similarity=0.117 Sum_probs=41.2
Q ss_pred CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEEe
Q 038439 94 MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTAN 167 (179)
Q Consensus 94 ~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~ 167 (179)
-...+.|+|.|+|+++++-...+.|++++..+++......+.... ........+..++|+|+ +..|+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~----~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV----NDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC----CCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc----cccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 445689999999997776554457888876555432222121100 00011456889999995 55555544
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.70 E-value=1.5 Score=29.47 Aligned_cols=64 Identities=13% Similarity=0.077 Sum_probs=33.7
Q ss_pred CeEEEecCC------CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc---------CCcEEEEEcCCCcc
Q 038439 65 DELASASTD------STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE---------SNEVYVYHKEISKP 128 (179)
Q Consensus 65 ~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~v~vwd~~~~~~ 128 (179)
..++.|+.+ ..+.+||..+.+-...-..............+++.++.|+. -..+.+||+.+.+-
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 455566544 45888898875432211111111111112236777777764 34588999987643
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.21 E-value=1.8 Score=29.27 Aligned_cols=64 Identities=11% Similarity=-0.005 Sum_probs=33.9
Q ss_pred CeEEEecC-C-----CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCC-----cEEEEEcCCCcc
Q 038439 65 DELASAST-D-----STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESN-----EVYVYHKEISKP 128 (179)
Q Consensus 65 ~~l~~~~~-d-----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~v~vwd~~~~~~ 128 (179)
..++.|+. + ..+.+||+.+.+-...-..........+...+++.++.|+.++ .+.+||+.+.+-
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 45556654 2 3688889876532211111111111112223677777777654 488899887643
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.14 E-value=2.1 Score=29.88 Aligned_cols=73 Identities=10% Similarity=-0.007 Sum_probs=54.0
Q ss_pred EEEEeeC-CeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccc
Q 038439 58 YVKFLSN-DELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVT 130 (179)
Q Consensus 58 ~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~ 130 (179)
++..++. +.+..-+.-|.+.+||++++.++..-+-....|...+.+....=++.....|.|.-..+.....+.
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHH
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEeh
Confidence 4556666 778888889999999999999987766666677666655554456666788888877777665543
No 334
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.07 E-value=1.8 Score=28.96 Aligned_cols=100 Identities=7% Similarity=0.010 Sum_probs=50.7
Q ss_pred CeEEEecCC-----CcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCcccccc
Q 038439 65 DELASASTD-----STLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWH 132 (179)
Q Consensus 65 ~~l~~~~~d-----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~ 132 (179)
..++.|+.+ ..+.+||+.+.+-.. .+....... .....+++.++.|+.+ ..+.+||+.+.+-...-
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA--GLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC--EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc--eEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 455555533 357888887654322 221111111 1222367777777754 45889998876533221
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
....+ ......+.+ +++.++.|+.+ ..+.+||++
T Consensus 192 ~~p~~----------r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 192 PMATK----------RSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp CCSSC----------CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCcc----------cccceEEEE--CCEEEEEeCCCCCcccceEEEEeCC
Confidence 11110 111112222 56667777664 457888865
No 335
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.94 E-value=4.5 Score=33.23 Aligned_cols=111 Identities=14% Similarity=0.026 Sum_probs=65.6
Q ss_pred ceeEEEEeeCCeEEEecCCCcEEEEecCCCcce--eeecCCCCCeEEEEEeeC------CCEEEEecc-CCcEEEEEcCC
Q 038439 55 AVSYVKFLSNDELASASTDSTLRLWDVKENLPV--RTFRGHMNEKNFVGLTVN------SEYIACGSE-SNEVYVYHKEI 125 (179)
Q Consensus 55 ~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~------~~~~~~~~~-d~~v~vwd~~~ 125 (179)
.|...+.+. .+++.++ .+.+..+.+..++.. ... .-...|.|+++.|. +.++++|.. |+.++++++.+
T Consensus 515 ~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS-SQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 344444332 3454444 567777777654322 121 22457899998763 468999986 99999999987
Q ss_pred CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.+.+....+.... . ...+.-+.+ ....+|..|-.||.+.-+.+
T Consensus 592 l~~~~~~~L~~~~-------~-p~si~l~~~-~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 592 FELLHKEMLGGEI-------I-PRSILMTTF-ESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CCEEEEEECCSSC-------C-EEEEEEEEE-TTEEEEEEEETTSEEEEEEE
T ss_pred CCeEEEEECCCCC-------C-CcEEEEEEe-CCCcEEEEEeCCCeEEEEEE
Confidence 6666544442110 0 122222233 23467888888998766554
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.84 E-value=2.8 Score=30.57 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=31.1
Q ss_pred ceeEEEEeeC-C-eEEEecCCCcEEEEecCCC---cceeeec---------CCCCCeEEEEEeeC
Q 038439 55 AVSYVKFLSN-D-ELASASTDSTLRLWDVKEN---LPVRTFR---------GHMNEKNFVGLTVN 105 (179)
Q Consensus 55 ~i~~~~~~~~-~-~l~~~~~d~~v~iwd~~~~---~~~~~~~---------~~~~~v~~~~~~~~ 105 (179)
.-+.|+|.|+ . .++.+...|.|++++.... +.+..+. ........|+++|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3467888888 3 4666677888888874322 1222221 01345778999996
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.72 E-value=2.1 Score=28.89 Aligned_cols=100 Identities=7% Similarity=-0.029 Sum_probs=49.8
Q ss_pred CeEEEecCC-----CcEEEEecCCCcceee--ecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCcccccc
Q 038439 65 DELASASTD-----STLRLWDVKENLPVRT--FRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKPVTWH 132 (179)
Q Consensus 65 ~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~~~~~ 132 (179)
..++.|+.+ ..+.+||+.+.+-... +.........+. -++..++.|+.+ ..+.+||+.+.+-....
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence 445555432 3577888876542221 111111112222 267777777654 45889998876433221
Q ss_pred ccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCC-----CcEEEEeec
Q 038439 133 RFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQ-----GTIKVLVLA 178 (179)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 178 (179)
....+ ......+.+ +++.++.|+.+ ..+.+||+.
T Consensus 201 ~~p~~----------r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 201 AMNTI----------RSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp CCSSC----------CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCc----------cccceEEEE--CCEEEEEeCCCCCCccceEEEEeCC
Confidence 11110 111122222 56677777654 458888865
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.68 E-value=1.8 Score=30.19 Aligned_cols=66 Identities=11% Similarity=-0.008 Sum_probs=37.1
Q ss_pred CCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccC---CCeEEEE
Q 038439 95 NEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSD---SPTMLTA 166 (179)
Q Consensus 95 ~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~ 166 (179)
.....|+|.|+|+.++++...|.|++++.. ++....+.- ... .. .........++++|+ +..|+..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~-~~~---v~-~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSG-VPD---VW-AHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBS-CCC---CC-CSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecC-Ccc---cc-cCCCCCceeEEECCCCCCCCEEEEE
Confidence 346789999999834445567899998853 322111110 000 00 011345788999996 5555544
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.03 E-value=2.5 Score=28.56 Aligned_cols=93 Identities=12% Similarity=0.039 Sum_probs=45.5
Q ss_pred CcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc-C-----CcEEEEEcCCCccccccccCCCCCCCCcccCC
Q 038439 74 STLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE-S-----NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAG 147 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (179)
..+.+||+.+.+-...-..........+...+++.++.|+. + ..+.+||+.+.+-........+
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---------- 186 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA---------- 186 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC----------
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc----------
Confidence 35788888775422111111111111222346777777776 2 4688999887643222111110
Q ss_pred cceEEEEEEccCCCeEEEEeCCC-----cEEEEeec
Q 038439 148 SYFISAVCWKSDSPTMLTANSQG-----TIKVLVLA 178 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 178 (179)
......+.+ +++.++.|+.++ .+.+||+.
T Consensus 187 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 187 RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred hhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 111111222 567777776654 47777764
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.46 E-value=0.65 Score=37.08 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=30.6
Q ss_pred ceeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeec
Q 038439 55 AVSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFR 91 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~ 91 (179)
.+.++...++ .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4566777777 899999999999999999998877643
No 341
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.08 E-value=2.8 Score=31.67 Aligned_cols=59 Identities=7% Similarity=0.086 Sum_probs=39.1
Q ss_pred eEEEEEeeCCCEEEEeccC------------CcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEE
Q 038439 97 KNFVGLTVNSEYIACGSES------------NEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTML 164 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~~d------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 164 (179)
.-.|.|+|+|++++.-..+ ..+.+.+..+++....+.. .. ...++.++|+||++.|+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~----------gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PI----------GCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CT----------TCEEEEEEECTTSSEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CC----------CccCcCeeECCCCCEEE
Confidence 4568999999976654322 2355566666655433321 11 67899999999999887
Q ss_pred EE
Q 038439 165 TA 166 (179)
Q Consensus 165 ~~ 166 (179)
+.
T Consensus 547 vn 548 (592)
T 3zwu_A 547 VG 548 (592)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.44 E-value=5 Score=27.12 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=28.0
Q ss_pred cEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc------CCcEEEEEcCCCcc
Q 038439 75 TLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE------SNEVYVYHKEISKP 128 (179)
Q Consensus 75 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~v~vwd~~~~~~ 128 (179)
.+.+||+.+.+-...-..........+...++..++.|+. -..+.+||+.+.+-
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 4777888765432211111111111122246777777764 24589999987653
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.24 E-value=7.7 Score=29.86 Aligned_cols=107 Identities=7% Similarity=0.002 Sum_probs=52.5
Q ss_pred CeEEEecCC------CcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEeccCC--cEEEEEcCCCcccccccc
Q 038439 65 DELASASTD------STLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSESN--EVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 65 ~~l~~~~~d------~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~vwd~~~~~~~~~~~~ 134 (179)
..++.|+.+ ..+.+||..+.+-.. .+...... .++..-.++..++.|+.++ .+.+||+.+..-......
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~ 531 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPK 531 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCS
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCC
Confidence 455555532 246778877643221 11111111 1222323788888887654 689999987653221110
Q ss_pred CCCCCCCCcccCCcceEEEEEEccC-CCeEEEEeC--C-----CcEEEEeecC
Q 038439 135 SSPDMDDTDEDAGSYFISAVCWKSD-SPTMLTANS--Q-----GTIKVLVLAA 179 (179)
Q Consensus 135 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~--d-----g~i~iwd~~~ 179 (179)
... ... ......+.+..+ ++.++.|+. + +.+.+||+.+
T Consensus 532 g~~--p~~-----r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 532 DEF--FQN-----SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp SGG--GGS-----CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred CCC--CCc-----ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 000 000 111122444544 566667765 2 3588888753
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.86 E-value=5.5 Score=26.93 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=28.4
Q ss_pred CcEEEEecCCCcceee--ecCCCCCeEEEEEeeCCCEEEEeccC-----CcEEEEEcCCCcc
Q 038439 74 STLRLWDVKENLPVRT--FRGHMNEKNFVGLTVNSEYIACGSES-----NEVYVYHKEISKP 128 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~vwd~~~~~~ 128 (179)
..+.+||+.+.+-... +....... ++. .-+++.++.|+.+ ..+.+||+.+.+-
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMF-GVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccc-eEE-EECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 3588899887542221 11111111 222 2367777777653 3477889887653
No 345
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=85.51 E-value=6.4 Score=29.69 Aligned_cols=62 Identities=10% Similarity=0.123 Sum_probs=40.5
Q ss_pred CCeEEEEEeeCCCEEEEecc------------CCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCe
Q 038439 95 NEKNFVGLTVNSEYIACGSE------------SNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPT 162 (179)
Q Consensus 95 ~~v~~~~~~~~~~~~~~~~~------------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 162 (179)
.....|.|.++|.+.+.... ...|..++..+++....... +. ...++.++|+||++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P~---------~aEpnGiafSPD~kt 544 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PI---------GCEVTGISFSPDQKT 544 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--CT---------TCEEEEEEECTTSSE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--CC---------CccccCCEECCCCCE
Confidence 34567999999988773321 12566667666665433321 10 457899999999998
Q ss_pred EEEEe
Q 038439 163 MLTAN 167 (179)
Q Consensus 163 l~~~~ 167 (179)
|++.-
T Consensus 545 LfV~v 549 (592)
T 4a9v_A 545 LFVGI 549 (592)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87754
No 346
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.68 E-value=0.94 Score=36.94 Aligned_cols=36 Identities=31% Similarity=0.365 Sum_probs=28.8
Q ss_pred eeEEEEeeC-CeEEEecCCCcEEEEecCCCcceeeec
Q 038439 56 VSYVKFLSN-DELASASTDSTLRLWDVKENLPVRTFR 91 (179)
Q Consensus 56 i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~ 91 (179)
+.++...++ .++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344555566 889999999999999999998877643
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.75 E-value=1.1 Score=36.59 Aligned_cols=38 Identities=8% Similarity=-0.128 Sum_probs=30.6
Q ss_pred eEEEEEeeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 97 KNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 97 v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
+.+++..++..++++-+.|+.+++|++.+++++.+..+
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 34456667788999999999999999999987766543
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.48 E-value=15 Score=28.31 Aligned_cols=63 Identities=11% Similarity=0.155 Sum_probs=37.2
Q ss_pred CeEEEecCCC--cEEEEecCCCcceee-----ecCCCCCeEEEEEeeC-CCEEEEecc--C-----CcEEEEEcCCCc
Q 038439 65 DELASASTDS--TLRLWDVKENLPVRT-----FRGHMNEKNFVGLTVN-SEYIACGSE--S-----NEVYVYHKEISK 127 (179)
Q Consensus 65 ~~l~~~~~d~--~v~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~-~~~~~~~~~--d-----~~v~vwd~~~~~ 127 (179)
..++.|+.++ .+.+||..+.+-... ..........+.+..+ +..++.|+. + ..+.+||+.+..
T Consensus 502 ~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 502 NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 6666766544 688899887542211 1111222233555555 667777765 2 458899998876
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.43 E-value=13 Score=25.56 Aligned_cols=64 Identities=8% Similarity=0.076 Sum_probs=32.6
Q ss_pred CeEEEecC-CCcEEEEecCC-CcceeeecCCC--CCeEEEEEeeCCCEEEEecc-C---------CcEEEEEcCCCcc
Q 038439 65 DELASAST-DSTLRLWDVKE-NLPVRTFRGHM--NEKNFVGLTVNSEYIACGSE-S---------NEVYVYHKEISKP 128 (179)
Q Consensus 65 ~~l~~~~~-d~~v~iwd~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~-d---------~~v~vwd~~~~~~ 128 (179)
..++.|+. ...+.+||+.. ...-..+..-. .........-++.+++.|+. + ..+.+||+.+.+-
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 44455543 45688888863 11122221111 11111112236777777776 2 4688999887653
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=78.89 E-value=13 Score=25.46 Aligned_cols=49 Identities=10% Similarity=-0.119 Sum_probs=25.0
Q ss_pred CcEEEEecCCCccee--eecCCCCCeEEEEEeeCCCEEEEecc------CCcEEEEEc
Q 038439 74 STLRLWDVKENLPVR--TFRGHMNEKNFVGLTVNSEYIACGSE------SNEVYVYHK 123 (179)
Q Consensus 74 ~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~v~vwd~ 123 (179)
..+.+||+.+.+-.. .+......-.++.. .++++++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 468889987754322 22111111012222 35667777764 345777876
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=78.84 E-value=13 Score=25.30 Aligned_cols=65 Identities=9% Similarity=0.126 Sum_probs=38.5
Q ss_pred EEEeeC-CeEEEec----CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEecc-CCcEEEEEcCCCcc
Q 038439 59 VKFLSN-DELASAS----TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSE-SNEVYVYHKEISKP 128 (179)
Q Consensus 59 ~~~~~~-~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~vwd~~~~~~ 128 (179)
..++++ +.|+-.. ....|..-++.... ...+..+.. .+++|+++.|+-.+. ...|.+-++..+..
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 367777 6666554 33455555665433 344443322 456788888775554 57788888776543
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.59 E-value=4.3 Score=31.42 Aligned_cols=29 Identities=14% Similarity=0.370 Sum_probs=24.8
Q ss_pred CCeEEEecCCCcEEEEecCCCcceeeecC
Q 038439 64 NDELASASTDSTLRLWDVKENLPVRTFRG 92 (179)
Q Consensus 64 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 92 (179)
+.++++-+.|+++|+|++.+++++.....
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 38999999999999999999987766543
No 353
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=78.53 E-value=21 Score=27.59 Aligned_cols=106 Identities=8% Similarity=0.023 Sum_probs=58.4
Q ss_pred ceeEEEEeeCCeEEEecCCCcEEEEecCCCcceeeecCC------CCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCcc
Q 038439 55 AVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGH------MNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKP 128 (179)
Q Consensus 55 ~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~ 128 (179)
.|.++...+++.+..++.. -+..++..+++. ..+... ...|.++...+++..|..|+. +-+..+|..+++.
T Consensus 147 ~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 147 TIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp CEEEEEECTTCCEEEEETT-EEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred eEEEEEEcCCCCEEEEeCC-CHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 4666655545555555554 467788765542 222111 123777777776665555554 4577888876543
Q ss_pred ccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 129 VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
....... ...|.++....+|.+. .|+.+ -+.+++.
T Consensus 224 ~~~~~l~------------~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~ 258 (758)
T 3ott_A 224 KQTEAFH------------NNSIKSLALDGNGDLL-AGTDN-GLYVYHN 258 (758)
T ss_dssp EEEEEEE------------EEEEEEEEECTTCCEE-EEETT-EEEEECC
T ss_pred EeccCCC------------CCeEEEEEEcCCCCEE-EEeCC-ceeEEec
Confidence 2211110 4457788777777644 45544 4666654
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.92 E-value=12 Score=27.26 Aligned_cols=30 Identities=7% Similarity=-0.126 Sum_probs=22.4
Q ss_pred CCeEEEEEeeCCC-EEEEeccCCcEEEEEcC
Q 038439 95 NEKNFVGLTVNSE-YIACGSESNEVYVYHKE 124 (179)
Q Consensus 95 ~~v~~~~~~~~~~-~~~~~~~d~~v~vwd~~ 124 (179)
...+.|+|.|+|. .++++...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3467899999986 45555678999999754
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=77.86 E-value=3 Score=32.26 Aligned_cols=32 Identities=3% Similarity=0.044 Sum_probs=27.4
Q ss_pred eeCCCEEEEeccCCcEEEEEcCCCcccccccc
Q 038439 103 TVNSEYIACGSESNEVYVYHKEISKPVTWHRF 134 (179)
Q Consensus 103 ~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~ 134 (179)
..+..++++-+.|..+|+|++++++++.....
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34578999999999999999999988776665
No 356
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=77.81 E-value=14 Score=25.13 Aligned_cols=64 Identities=5% Similarity=0.025 Sum_probs=36.4
Q ss_pred EEeeC-CeEEEec-CCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccC--CcEEEEEcCCCc
Q 038439 60 KFLSN-DELASAS-TDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSES--NEVYVYHKEISK 127 (179)
Q Consensus 60 ~~~~~-~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d--~~v~vwd~~~~~ 127 (179)
.++++ +.|.-.+ ....|.+-++..+.....+.+ .. ...+.|++.+|+-.... ..|..-++..+.
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 45666 5555444 467788888776554333332 22 23466988887765433 356555665544
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.32 E-value=33 Score=26.03 Aligned_cols=57 Identities=11% Similarity=-0.003 Sum_probs=36.1
Q ss_pred eeEEEEeeC-CeEEEecC------------CCcEEEEecCCCcceeeecCC-CCCeEEEEEeeCCCEEEEe
Q 038439 56 VSYVKFLSN-DELASAST------------DSTLRLWDVKENLPVRTFRGH-MNEKNFVGLTVNSEYIACG 112 (179)
Q Consensus 56 i~~~~~~~~-~~l~~~~~------------d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~ 112 (179)
...|.|.++ .+++.... ...|..++..+++....+... ...++.++|+||++.|++.
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 456778877 55552221 114566666667655544433 3568999999999988765
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=69.29 E-value=25 Score=24.27 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=62.5
Q ss_pred CeEEEecCCCcEEEEecCCCc-------ceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcC--CCccccccccC
Q 038439 65 DELASASTDSTLRLWDVKENL-------PVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKE--ISKPVTWHRFS 135 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~--~~~~~~~~~~~ 135 (179)
..++..+.+|.++.-.+.... ....++. ...+..+........++..+..|.+..+... .-..... ...
T Consensus 110 ~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr-~a~ 187 (327)
T 3uc1_A 110 PYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGR-ATS 187 (327)
T ss_dssp SEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCT-TSB
T ss_pred CEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCc-CCC
Confidence 789999999999988765421 1123333 2344445444455677777888988878766 2111100 000
Q ss_pred CCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 136 SPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
...... ... ...|..+...+++..++..+..|.++.-.+
T Consensus 188 Gv~~i~--L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 188 GVQGMR--FNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CEESSC--CCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred Ceeeec--CCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 000000 011 445666666566678999999998887654
No 359
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.85 E-value=36 Score=25.94 Aligned_cols=68 Identities=7% Similarity=-0.110 Sum_probs=46.8
Q ss_pred eEEEEeeC-CeEEE-ecCCCcEEEEecCCC------cc-------eeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEE
Q 038439 57 SYVKFLSN-DELAS-ASTDSTLRLWDVKEN------LP-------VRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVY 121 (179)
Q Consensus 57 ~~~~~~~~-~~l~~-~~~d~~v~iwd~~~~------~~-------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vw 121 (179)
..+..+|+ .+++. +-.+.++.++|++.- +. ..... -.......+|.++|.-+.+..-|.+|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 45778899 55544 445889999998741 11 12222 23345678999999656666789999999
Q ss_pred EcCC
Q 038439 122 HKEI 125 (179)
Q Consensus 122 d~~~ 125 (179)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9875
No 360
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=67.35 E-value=35 Score=25.21 Aligned_cols=27 Identities=15% Similarity=0.235 Sum_probs=22.8
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
..+|..|.++++..+|++++.++-++|
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 457899999999999999999886654
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.61 E-value=39 Score=25.65 Aligned_cols=56 Identities=13% Similarity=0.022 Sum_probs=35.6
Q ss_pred eEEEEeeC-CeEEEecCC------------CcEEEEecCCCcceeeecCC-CCCeEEEEEeeCCCEEEEe
Q 038439 57 SYVKFLSN-DELASASTD------------STLRLWDVKENLPVRTFRGH-MNEKNFVGLTVNSEYIACG 112 (179)
Q Consensus 57 ~~~~~~~~-~~l~~~~~d------------~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~ 112 (179)
-.|.|+|. ++++.-..+ ..+.+.+..+++..+.+..+ ..+++.++|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45778888 544443322 23455566666665555543 4678899999999887664
No 362
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=65.58 E-value=26 Score=26.20 Aligned_cols=67 Identities=10% Similarity=0.023 Sum_probs=42.5
Q ss_pred CceeEEEEeeC---CeEEEecCCCcEEEEecCCCc----ceeeec--CCCCCeE-EEEEeeCCCEEEEeccCCcEEE
Q 038439 54 KAVSYVKFLSN---DELASASTDSTLRLWDVKENL----PVRTFR--GHMNEKN-FVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 54 ~~i~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~----~~~~~~--~~~~~v~-~~~~~~~~~~~~~~~~d~~v~v 120 (179)
..+++++.... ..++.|..+|.|.-..+.... .+..+. ....+|. .|.+++++.+|++++..+.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35666666554 567788889987665543221 222222 2245674 8999999999999887765544
No 363
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=63.77 E-value=49 Score=25.59 Aligned_cols=27 Identities=15% Similarity=0.235 Sum_probs=22.9
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
..+|..|.++++.+.|++++.++-++|
T Consensus 469 ~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 469 PTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 557889999999999999999886654
No 364
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=63.12 E-value=20 Score=26.74 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=40.0
Q ss_pred eEEEEEeeCCC--EEEEeccCCcEEEEEcCCCc----cccccccCCCCCCCCcccCCcceEE-EEEEccCCCeEEEEeCC
Q 038439 97 KNFVGLTVNSE--YIACGSESNEVYVYHKEISK----PVTWHRFSSPDMDDTDEDAGSYFIS-AVCWKSDSPTMLTANSQ 169 (179)
Q Consensus 97 v~~~~~~~~~~--~~~~~~~d~~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d 169 (179)
.+.++....+. .++.|..+|.|+=..+.... .+..+.+... ..+|. .|.+++++.+|++++.+
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~----------~~pv~~~l~~~~~~~~Lyv~s~~ 471 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKD----------GSPILRDMAFSINQLYLYVMSER 471 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTT----------CCCCCSCCEECTTSSEEEEECSS
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecC----------CCccccceEEccCCCeEEEEecc
Confidence 45555554333 36778888887654444321 1112222111 34564 78899999999999988
Q ss_pred CcEEE
Q 038439 170 GTIKV 174 (179)
Q Consensus 170 g~i~i 174 (179)
+-++|
T Consensus 472 ~V~kv 476 (539)
T 3al9_A 472 QVTRV 476 (539)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 75554
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=56.87 E-value=41 Score=22.51 Aligned_cols=110 Identities=7% Similarity=-0.030 Sum_probs=59.7
Q ss_pred ceeEEEEeeC-CeEEEecCCCcEEE---EecCCCcceeeecCCCCCeEEEEEee--CCCEEEEeccCCcEEEEEcCCCc-
Q 038439 55 AVSYVKFLSN-DELASASTDSTLRL---WDVKENLPVRTFRGHMNEKNFVGLTV--NSEYIACGSESNEVYVYHKEISK- 127 (179)
Q Consensus 55 ~i~~~~~~~~-~~l~~~~~d~~v~i---wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~d~~v~vwd~~~~~- 127 (179)
.+..+.-... ..++.-+..|.++- +++........+. ....|..+-. + +..+++..+.+|.++-..+....
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 3444433344 55555555665443 3333221100133 2344555433 3 46788999999999998876543
Q ss_pred ---cccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 128 ---PVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
-.....+.. ...+..+........++..+..|.+..++.
T Consensus 103 ~~~G~~~i~lke-----------gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 103 KAQGMPIIKLTE-----------GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp CSTTEECSCCCT-----------TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred hcCCeEEEecCC-----------CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 011111110 334555555556667888899998877764
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=50.05 E-value=75 Score=23.50 Aligned_cols=66 Identities=8% Similarity=0.027 Sum_probs=41.2
Q ss_pred ceeEEEEee------C-CeEEEecCCCcEEEEecC-CC-------cceeeec--CCCCCeEEEEEeeCCCEEEEeccCCc
Q 038439 55 AVSYVKFLS------N-DELASASTDSTLRLWDVK-EN-------LPVRTFR--GHMNEKNFVGLTVNSEYIACGSESNE 117 (179)
Q Consensus 55 ~i~~~~~~~------~-~~l~~~~~d~~v~iwd~~-~~-------~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~ 117 (179)
..++|+... + ..++.|..+|.|.-.-+. .. ..+..+. ....+|..|.++++..+|++++..+.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456665442 1 457788888877544332 21 1222332 23568899999999999999988776
Q ss_pred EEE
Q 038439 118 VYV 120 (179)
Q Consensus 118 v~v 120 (179)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=48.91 E-value=61 Score=22.12 Aligned_cols=102 Identities=11% Similarity=0.180 Sum_probs=62.3
Q ss_pred CeEEEecCCCcEEEEecCC-------CcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccc-------c
Q 038439 65 DELASASTDSTLRLWDVKE-------NLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPV-------T 130 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~-------~ 130 (179)
..++..+..|.++.-.+.. +.....+.. ...+..+........++..+.+|.+..+....-... .
T Consensus 115 ~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~ 193 (312)
T 1suu_A 115 AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVC 193 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEE
T ss_pred CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeE
Confidence 6788889999988877643 222223333 344555555444567888888999988887542111 1
Q ss_pred ccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEeec
Q 038439 131 WHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 178 (179)
.+.+. . ...|..+..-.++..+++.+..|..+..++.
T Consensus 194 ~i~L~----------~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 194 GMKLK----------E-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CCCCC----------T-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eEEeC----------C-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 11111 1 3345555554556678888999988877653
No 368
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=45.05 E-value=1e+02 Score=23.52 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=34.5
Q ss_pred eEEEecCCCcEEEEecCCCc----c--eeeec--CCCCCeEEEEEeeCCCEEEEeccCCcEEE
Q 038439 66 ELASASTDSTLRLWDVKENL----P--VRTFR--GHMNEKNFVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 66 ~l~~~~~d~~v~iwd~~~~~----~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~v 120 (179)
.++.|+.+|.|...-..... . +..+. ....+|..+.++++...|++++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 46677788877644332211 1 12222 23567889999999888888877665554
No 369
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=44.59 E-value=93 Score=23.29 Aligned_cols=67 Identities=10% Similarity=-0.042 Sum_probs=42.4
Q ss_pred CceeEEEEeeC---CeEEEecCCCcEEEEecC-CC--cceeeec-CCCCCe-EEEEEeeCCCEEEEeccCCcEEE
Q 038439 54 KAVSYVKFLSN---DELASASTDSTLRLWDVK-EN--LPVRTFR-GHMNEK-NFVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 54 ~~i~~~~~~~~---~~l~~~~~d~~v~iwd~~-~~--~~~~~~~-~~~~~v-~~~~~~~~~~~~~~~~~d~~v~v 120 (179)
...+.|+...- ..++.|+.+|.|...-+. .. ..+..+. ....+| ..+.++++..+|++++..+.+++
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 34677765543 456778889987754443 21 1222222 234566 48899999999999888876665
No 370
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=43.70 E-value=70 Score=21.34 Aligned_cols=67 Identities=10% Similarity=-0.005 Sum_probs=31.8
Q ss_pred CceeEEEEeeCCeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC
Q 038439 54 KAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125 (179)
Q Consensus 54 ~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~ 125 (179)
..|..++......++ -. |+.|..|-....-.+.........|..++...+. .++. .+|.|+.|=...
T Consensus 141 ~~i~~i~~G~~~~~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 141 SGVTALDGGVYTALA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp SSEEEEEECSSEEEE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred CCeEEEEcccCEEEE-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 345555543332222 23 6788888655422221111112345555543322 2333 588888886544
No 371
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=42.90 E-value=78 Score=24.11 Aligned_cols=27 Identities=7% Similarity=0.129 Sum_probs=22.2
Q ss_pred cceEEEEEEccCCCeEEEEeCCCcEEE
Q 038439 148 SYFISAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 148 ~~~i~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
..+|..+.++++...|++++.++.++|
T Consensus 418 ~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 418 AAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp CCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred CCceeeEEEcCCCCEEEEEecceEEEc
Confidence 456888999999999999998876655
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=41.90 E-value=76 Score=21.21 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=66.4
Q ss_pred CceeEEEEee-C-CeEEEecCCCcEEEEecCCCc------ceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC
Q 038439 54 KAVSYVKFLS-N-DELASASTDSTLRLWDVKENL------PVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125 (179)
Q Consensus 54 ~~i~~~~~~~-~-~~l~~~~~d~~v~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~ 125 (179)
..|..+.... + ..++..+.+|.++...+.... ....++. ...+..+........++..+..|.+..++...
T Consensus 68 e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 68 EKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp CCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 3455553321 3 788899999999988765432 1122332 23444454444556777788889888887643
Q ss_pred CccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 126 SKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
-.............. . .. ...|..+...+++..++..+..|.++...+
T Consensus 147 ip~~gR~a~Gv~~i~--L-~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 147 VPPSTPGARGVQGIK--L-EK-NDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp SCBCCTTCCCEECCC--C-CT-TCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred CCCcCCCCCCEEEEc--c-CC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 221110000000000 0 11 345666555556678889999998887665
No 373
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=41.36 E-value=98 Score=24.07 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=40.5
Q ss_pred ceeEEEEeeC---CeEEEecCCCcEEEEecCCC----cceeee--cCCCCCe-EEEEEeeCCCEEEEeccCCcEEE
Q 038439 55 AVSYVKFLSN---DELASASTDSTLRLWDVKEN----LPVRTF--RGHMNEK-NFVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 55 ~i~~~~~~~~---~~l~~~~~d~~v~iwd~~~~----~~~~~~--~~~~~~v-~~~~~~~~~~~~~~~~~d~~v~v 120 (179)
..+.++.... ..++.|..+|.|...-+... ..+..+ .....+| ..+.++++..+|++++..+.+++
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3455554443 55778888998875544321 122222 1134455 68899998888888887766655
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=40.57 E-value=1e+02 Score=23.86 Aligned_cols=55 Identities=9% Similarity=0.034 Sum_probs=34.9
Q ss_pred eEEEecCCCcEEE-EecCCCc-------ceeee--cCCCCCeEEEEEeeCCCEEEEeccCCcEEE
Q 038439 66 ELASASTDSTLRL-WDVKENL-------PVRTF--RGHMNEKNFVGLTVNSEYIACGSESNEVYV 120 (179)
Q Consensus 66 ~l~~~~~d~~v~i-wd~~~~~-------~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~v 120 (179)
.++.|..+|.|.- .-..... .+..+ .....+|..|.++++...|++++..+.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888887653 2222111 12211 234667899999999999999988776654
No 375
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=40.09 E-value=81 Score=21.03 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=33.0
Q ss_pred CceeEEEEeeCCeEEEecCCCcEEEEecCCCcceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCC
Q 038439 54 KAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEI 125 (179)
Q Consensus 54 ~~i~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~ 125 (179)
..|..++......++. . |+.|..|-....-.+.....-...|..++...+ ..+.-. +|.|+.|=...
T Consensus 63 ~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp SCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT
T ss_pred CCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC
Confidence 3566666554422233 3 788888876542222111111234555554433 222233 78888886543
No 376
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.91 E-value=1.6e+02 Score=22.81 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=70.1
Q ss_pred CceeEEEEcCCCCeEEEEe--------CCCcee-e--ecc----cCceeEEEEeeC-CeEEEecCCCcEEEEecCCCcce
Q 038439 24 ANICCVKYNPGSSNYIAKY--------QSTAPC-V--HGH----KKAVSYVKFLSN-DELASASTDSTLRLWDVKENLPV 87 (179)
Q Consensus 24 ~~v~~~~~~~~~~~~~~~~--------~~~~~~-~--~~~----~~~i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~ 87 (179)
..|.++...+++...+.+. ...+.. + ... ...|.++...++ +.|..++. +-+..+|..+++..
T Consensus 146 ~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~ 224 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK 224 (758)
T ss_dssp SCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE
T ss_pred CeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE
Confidence 4578888887775444442 111111 1 110 123677766655 54555553 45778887765432
Q ss_pred eeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEe
Q 038439 88 RTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTAN 167 (179)
Q Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 167 (179)
.........|.++....+|.+.+. +.+ -+.+++..+.+... +....... .... ...|.++....+|+ |..|+
T Consensus 225 ~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~-~~~~~~~~---~~l~-~~~i~~i~~D~~g~-lWiGT 296 (758)
T 3ott_A 225 QTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQH-IIHDSRNI---QSLT-NNIIWNIFADQEHN-IWLGT 296 (758)
T ss_dssp EEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEE-ECCCTTCT---TSCS-CSCEEEEEECTTCC-EEEEE
T ss_pred eccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEE-EEcCCCCc---CcCC-cCeEEEEEEcCCCC-EEEEe
Confidence 111111234677777777776554 444 47788877654321 11110000 0001 44688888777776 44555
Q ss_pred CCC
Q 038439 168 SQG 170 (179)
Q Consensus 168 ~dg 170 (179)
..|
T Consensus 297 ~~G 299 (758)
T 3ott_A 297 DYG 299 (758)
T ss_dssp SSS
T ss_pred CCc
Confidence 555
No 377
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=31.75 E-value=1.5e+02 Score=23.02 Aligned_cols=57 Identities=5% Similarity=0.054 Sum_probs=34.3
Q ss_pred EEEEeccCCcEE-EEEcCCCcc-ccccccCCCCCCCCcccCCcceEEEEEEccCC--CeEEEEeCCCcEEE
Q 038439 108 YIACGSESNEVY-VYHKEISKP-VTWHRFSSPDMDDTDEDAGSYFISAVCWKSDS--PTMLTANSQGTIKV 174 (179)
Q Consensus 108 ~~~~~~~d~~v~-vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~i 174 (179)
.++.|..+|.|+ +........ +........ ..+|..|.++++. .+|++++.++-++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~----------~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQD----------FEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTT----------CCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCC----------CCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 467788888764 334333211 111111111 4567789999887 89999998876554
No 378
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=30.94 E-value=1.7e+02 Score=21.97 Aligned_cols=68 Identities=10% Similarity=0.108 Sum_probs=40.0
Q ss_pred CeEEEEEee-CC-CEEEEeccCCcEEEEEcC-CCc--cccccccCCCCCCCCcccCCcceE-EEEEEccCCCeEEEEeCC
Q 038439 96 EKNFVGLTV-NS-EYIACGSESNEVYVYHKE-ISK--PVTWHRFSSPDMDDTDEDAGSYFI-SAVCWKSDSPTMLTANSQ 169 (179)
Q Consensus 96 ~v~~~~~~~-~~-~~~~~~~~d~~v~vwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d 169 (179)
..+.++... ++ ..++.|+.+|.|+=.-+. ... .+..+... . ..+| ..+.++++...|++++.+
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~-~----------~~pi~~~l~l~~~~~~Lyv~s~~ 456 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQ-Q----------GSAVSRDLTFDGTFEHLYVMTQS 456 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESS-T----------TSCCCSCCEECTTSSEEEEECSS
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccC-C----------CCcceeeEEEecCCCEEEEEeCC
Confidence 355666554 23 235678888987644333 211 11122221 1 3456 478899999999999988
Q ss_pred CcEEE
Q 038439 170 GTIKV 174 (179)
Q Consensus 170 g~i~i 174 (179)
+.++|
T Consensus 457 ~V~~v 461 (528)
T 3ol2_B 457 TLLKV 461 (528)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 87665
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=23.71 E-value=1.8e+02 Score=19.78 Aligned_cols=108 Identities=13% Similarity=0.043 Sum_probs=60.5
Q ss_pred CeEEEecCCCcEEEEecCCCc-------ceeeecCCCCCeEEEEEeeCCCEEEEeccCCcEEEEEcCCCccccccccCCC
Q 038439 65 DELASASTDSTLRLWDVKENL-------PVRTFRGHMNEKNFVGLTVNSEYIACGSESNEVYVYHKEISKPVTWHRFSSP 137 (179)
Q Consensus 65 ~~l~~~~~d~~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd~~~~~~~~~~~~~~~ 137 (179)
.+++..+..|.++.-.+.... ....++.. ..+..+........++..+.+|.+..++...-...........
T Consensus 110 ~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~ 188 (307)
T 1zi0_A 110 VKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVR 188 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred cEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeE
Confidence 678899999999988764211 11223333 4444444444455677778889888787653221110000000
Q ss_pred CCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEee
Q 038439 138 DMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL 177 (179)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 177 (179)
.... .. ...|..+...+++..+++.+..|..+-.++
T Consensus 189 ~i~L---~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 189 GIRL---GE-GDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp CCCC---CT-TCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred eEEe---CC-CCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 0000 11 345666655555667888899988887665
No 380
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=23.35 E-value=1.2e+02 Score=23.52 Aligned_cols=57 Identities=7% Similarity=0.061 Sum_probs=33.5
Q ss_pred EEEEeccCCcEEEEEcCCCc----cccccccCCCCCCCCcccCCcceE-EEEEEccCCCeEEEEeCCCcEEE
Q 038439 108 YIACGSESNEVYVYHKEISK----PVTWHRFSSPDMDDTDEDAGSYFI-SAVCWKSDSPTMLTANSQGTIKV 174 (179)
Q Consensus 108 ~~~~~~~d~~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i 174 (179)
.++.|..+|.|+-.-+.... .+..+..... ..+| ..+.++++..+|++++.++.++|
T Consensus 414 VlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~----------~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 414 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKD----------GSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTT----------CCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEECCCceEEEEEECCCCCceEEEEEeeeccC----------CCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 36678888887644433211 1111111111 3355 57889998889999988876554
No 381
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=23.17 E-value=2e+02 Score=20.14 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=55.8
Q ss_pred eeEEEEeeC-CeEEEecCCCcEEEEecCCC-c-------c---eeeecC-CCCCeEEEEEeeCCCEEEEeccCCcEEEEE
Q 038439 56 VSYVKFLSN-DELASASTDSTLRLWDVKEN-L-------P---VRTFRG-HMNEKNFVGLTVNSEYIACGSESNEVYVYH 122 (179)
Q Consensus 56 i~~~~~~~~-~~l~~~~~d~~v~iwd~~~~-~-------~---~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~vwd 122 (179)
+..++.+.. ...+.-..|+.|..|-.... + . ...+.. ....|..++. -....+....+|.|+.|=
T Consensus 107 ~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG 184 (389)
T 3kci_A 107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWG 184 (389)
T ss_dssp EEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred eeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeC
Confidence 444555555 66666778999999965321 0 0 011111 1123444443 334455556789999996
Q ss_pred cCCCccccccccCCCCCCCCcccCCcceEEEEEEccCCCeEEEEeCCCcEEEEe
Q 038439 123 KEISKPVTWHRFSSPDMDDTDEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLV 176 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 176 (179)
......+-.-..................|..++........++-..||.|..|-
T Consensus 185 ~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG 238 (389)
T 3kci_A 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWG 238 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEE
T ss_pred CCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEe
Confidence 543111000000000000000000023466665543335566667788888874
No 382
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.01 E-value=1.1e+02 Score=16.99 Aligned_cols=15 Identities=20% Similarity=0.129 Sum_probs=8.5
Q ss_pred eEEEEeCCCcEEEEe
Q 038439 162 TMLTANSQGTIKVLV 176 (179)
Q Consensus 162 ~l~~~~~dg~i~iwd 176 (179)
+.+.--.||.+.+|+
T Consensus 91 ~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 91 YVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEEcCCceEEEec
Confidence 445555566666654
No 383
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=21.48 E-value=28 Score=25.29 Aligned_cols=19 Identities=11% Similarity=0.109 Sum_probs=12.8
Q ss_pred EeccCCcEEEEEcCCCccc
Q 038439 111 CGSESNEVYVYHKEISKPV 129 (179)
Q Consensus 111 ~~~~d~~v~vwd~~~~~~~ 129 (179)
.+..+|.|++||++....+
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 4567899999999987654
No 384
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.85 E-value=3e+02 Score=21.36 Aligned_cols=66 Identities=11% Similarity=0.120 Sum_probs=40.7
Q ss_pred ceeEEEEee----C----CeEEEecCCCcEEEE-ecCCCc-ceeee--cCCCCCeEEEEEeeCC--CEEEEeccCCcEEE
Q 038439 55 AVSYVKFLS----N----DELASASTDSTLRLW-DVKENL-PVRTF--RGHMNEKNFVGLTVNS--EYIACGSESNEVYV 120 (179)
Q Consensus 55 ~i~~~~~~~----~----~~l~~~~~d~~v~iw-d~~~~~-~~~~~--~~~~~~v~~~~~~~~~--~~~~~~~~d~~v~v 120 (179)
..+.|+... + ..++.|..+|.|.-. ...... .+..+ .....+|..|.++++. .+|++++..+.+++
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 456666532 1 357788888877543 333221 11111 1235678889999987 88998888776655
Done!