BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038446
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3
PE=2 SV=1
Length = 236
Score = 296 bits (757), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 190/243 (78%), Gaps = 19/243 (7%)
Query: 1 MGALSTQTQGLKASSTAIFNQKFSSSEKTSASFRLSLF--KNPISDFSGFSSKQSSFL-- 56
MG++S QT+ N S++EK + +FR SL KN ISD G SSK S+FL
Sbjct: 1 MGSVSGQTR------ITTMNLSLSTAEK-NPNFRSSLLNSKNAISDTLGVSSKCSTFLRG 53
Query: 57 -----GFS-LNHVRR-KHRGLVVSPCCVLPLTEENVERVLDEVRPGLMADGGNVALHEID 109
FS L H R + R + CV+PLTEENVERVLDEVRP LMADGGNVALHEID
Sbjct: 54 QFQRIHFSWLQHTRPLRKRTVFGHVSCVMPLTEENVERVLDEVRPSLMADGGNVALHEID 113
Query: 110 GLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTET-GLELNEENIEK 168
GLVVVLKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ L++ET GLELN+ENIEK
Sbjct: 114 GLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLELNDENIEK 173
Query: 169 VLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLREKIPSIAAVQ 228
VL+E+RPYL+GTGGG LEL++ID YVV+VRL+GPAAGVMTVRVALTQKLRE IPSI AVQ
Sbjct: 174 VLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAVQ 233
Query: 229 LID 231
L++
Sbjct: 234 LLE 236
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2
PE=1 SV=1
Length = 235
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/180 (70%), Positives = 146/180 (81%), Gaps = 2/180 (1%)
Query: 53 SSFLGFSLNHVRRKHRGLVVSPCCVL--PLTEENVERVLDEVRPGLMADGGNVALHEIDG 110
S FL R K V +P +L PLTEENVE VLDE+RP LM+DGGNVALHEIDG
Sbjct: 56 SRFLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDG 115
Query: 111 LVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELNEENIEKVL 170
+V +KLQGACGSCPSSTMT+KMGIE RL +KIPEI+ VE + D ETGLELNEENIEKVL
Sbjct: 116 NIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVL 175
Query: 171 AEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLREKIPSIAAVQLI 230
EIRPYL GT G L+L++I+D +V++R++GPAAGVMTVRVA+TQKLREKIPSIAAVQLI
Sbjct: 176 EEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=NIFU1 PE=1 SV=1
Length = 226
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 125/153 (81%)
Query: 78 LPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 137
LPLT NVE VLD+VRP L ADGG+VALHEI G VV LKLQGACGSCPSS +T+K GIE
Sbjct: 73 LPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIER 132
Query: 138 RLRDKIPEILEVEQILDTETGLELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRV 197
RL +KIP++ VE + D ETGLELNEEN+EKVL EIRPYLAGTGGG L+ + I +V+V
Sbjct: 133 RLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKV 192
Query: 198 RLSGPAAGVMTVRVALTQKLREKIPSIAAVQLI 230
RL+GPAA V TVR+A+++KLREKIPSI VQL+
Sbjct: 193 RLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1
PE=1 SV=1
Length = 231
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
Query: 80 LTEENVERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 139
LT +NV+ VL++VRP L++DGGNV + ++ VV LKLQGAC SCPSS+ T+ MGIE L
Sbjct: 85 LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144
Query: 140 RDKIPEIL-EVEQILDTETGLELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVR 198
++K + L ++ Q+ D E ++ E + L +RP + GG + E++ ++ V+
Sbjct: 145 KEKFGDALKDIRQVFDEEVK-QITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 202
Query: 199 LSGPAAGVMTVRVALTQKLRE 219
GP + M ++ A+ +K ++
Sbjct: 203 YVGPESIGMGIQAAIKEKFKD 223
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 159 LELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPA----AGVMTVRVALT 214
+L +N++ VL ++RP+L GG + +++ ++D VV ++L G + T+ + +
Sbjct: 83 FDLTPQNVDLVLEDVRPFLISDGGNV-DVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIE 141
Query: 215 QKLREKI 221
+ L+EK
Sbjct: 142 RVLKEKF 148
Score = 30.4 bits (67), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 77 VLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 136
V +T E V LD +RP + GG+V + ++G V+K G P S + MGI+
Sbjct: 163 VKQITVEAVNAHLDILRPAIKNYGGSVEVLSVEGEDCVVKYVG-----PES---IGMGIQ 214
Query: 137 TRLRDKIPEILEV 149
+++K +I V
Sbjct: 215 AAIKEKFKDISNV 227
>sp|P33179|NIFU_ANASL Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain
L31) GN=nifU PE=3 SV=1
Length = 112
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 85 VERVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
+++VLDE VRP L+ADGG+V L+++DG +V + LQGACGSCPSST TLK+ IE+RLRD+I
Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103
Query: 144 PEILEVEQI 152
L VE +
Sbjct: 104 NPSLVVEAV 112
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 85 VERVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
+++VLDE VRP L+ADGG+V L+++DG +V + LQGACGSC SST TLK+ IE+RLRD+I
Sbjct: 232 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
Query: 144 PEILEVEQI 152
L VE +
Sbjct: 292 NPSLVVEAV 300
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 85 VERVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
+++VLDE VRP L+ADGG+V L+++DG +V + LQGACGSC SST TLK+ IE+RLRD+I
Sbjct: 232 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
Query: 144 PEILEVEQI 152
L VE +
Sbjct: 292 NPSLVVEAV 300
>sp|B4H303|NFU1_DROPE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila persimilis GN=GL13432 PE=3 SV=1
Length = 282
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 178 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 237
Query: 144 PEILEVEQILDTETGLELNE-ENIEKVLAEIRPYLA--GTGGG 183
PE+ VEQ+ D + E E EK L + P A G GGG
Sbjct: 238 PEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280
>sp|B5DKJ8|NFU1_DROPS NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=GA22888
PE=3 SV=1
Length = 286
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILDTETGLELNE-ENIEKVLAEIRPYLA--GTGGG 183
PE+ VEQ+ D + E E EK L + P A G GGG
Sbjct: 242 PEVESVEQVFDDVDRMADKEFERFEKNLKQKEPAGAPVGIGGG 284
>sp|Q8SY96|NFU1_DROME NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1
Length = 283
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 11/105 (10%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ +G VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILD-----TETGLELNEENIEKVLAEIRPYLAGTGGG 183
PE+ VEQ+ D E+ E E+N+ K L + P +GGG
Sbjct: 242 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP----SGGG 281
>sp|B4NE93|NFU1_DROWI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila willistoni GN=GK25604 PE=3 SV=1
Length = 289
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ D VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 183 IKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 242
Query: 144 PEILEVEQILD-----TETGLELNEENI-EKVLAEIRPYLAGTGGG 183
PE+ VEQ+ D + E E N+ +K + P G GGG
Sbjct: 243 PEVESVEQVFDEADKMADKEFERFERNLKQKDTSSTAP--VGIGGG 286
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 85 VERVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
+++VLDE VRP L+ADGG+V L+++DG V + L+GACGSC SST TLK +E +LR ++
Sbjct: 137 IQKVLDEEVRPVLIADGGDVELYDVDGDFVKVTLKGACGSCASSTATLKDAVEAKLRLRV 196
Query: 144 PEILEVEQI 152
L V+ +
Sbjct: 197 LPTLVVQAV 205
>sp|B4PZ52|NFU1_DROYA NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila yakuba GN=GE15286 PE=3 SV=1
Length = 283
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILD-----TETGLELNEENIEKVLAEIRPYLAGTGGG 183
PE+ VEQ+ D ++ E E+N+ K L + P +GGG
Sbjct: 242 PEVESVEQVFDEADRMVDSEFERFEKNL-KTLKQQEP----SGGG 281
>sp|B3NYF7|NFU1_DROER NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila erecta GN=GG17526 PE=3 SV=1
Length = 283
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILD-----TETGLELNEENIEKVLAEIRPYLAG 179
PE+ VEQ+ D ++ E E+N+ K L + P AG
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEPSGAG 281
>sp|Q9UMS0|NFU1_HUMAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo
sapiens GN=NFU1 PE=1 SV=2
Length = 254
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG+V + +V LKLQG+C SCPSS +TLK GI+ L+ I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 144 PEILEVEQILDTET 157
PE+ VEQ++D E+
Sbjct: 233 PEVEGVEQVMDDES 246
>sp|O32119|YUTI_BACSU Putative nitrogen fixation protein YutI OS=Bacillus subtilis
(strain 168) GN=yutI PE=3 SV=1
Length = 111
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 82 EENVERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 139
+E V+ VLD++RP L+ DGG+ L ++D +V L+L GACGSCPSST+TLK GIE L
Sbjct: 40 KEQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 97
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 163 EENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVAL 213
+E +++VL ++RP+L GG EL+ +D+ +V++RL G + + L
Sbjct: 40 KEQVQEVLDKLRPFLLRDGGDC-ELVDVDEGIVKLRLLGACGSCPSSTITL 89
>sp|B4IMF6|NFU1_DROSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila sechellia GN=GM13534 PE=3 SV=1
Length = 283
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILDT-----ETGLELNEENIEKVLAEIRPYLAGTGGG 183
PE+ VEQ+ D ++ E E+N+ K L + P +GGG
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEP----SGGG 281
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + +V LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILD-----TETGLELNEENIEKVLAEIRPYLAGTGGG 183
PE+ VEQ+ D ++ E E N+ K L E + A GGG
Sbjct: 242 PEVESVEQVFDAVDKMADSEFERFERNL-KALKE-KDSAAPAGGG 284
>sp|B4M375|NFU1_DROVI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila virilis GN=GJ19011 PE=3 SV=1
Length = 298
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + +V LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 190 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 249
Query: 144 PEILEVEQILDTETGLELNE-ENIEKVLAE 172
PE+ VEQ+ D + E E EK L +
Sbjct: 250 PEVESVEQVFDDADKMANKEFERFEKSLMQ 279
>sp|B4R3T1|NFU1_DROSI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila simulans GN=GD15490 PE=3 SV=1
Length = 283
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 144 PEILEVEQILDTETGLELNE-ENIEKVLAEIRPYLAGTGG 182
PE+ VEQ+ D + +E E EK L ++ GG
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQGPSGGG 281
>sp|P32860|NFU1_YEAST NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFU1 PE=1 SV=2
Length = 256
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Query: 80 LTEEN------VERVLD-EVRPGLMADGGNVALHEIDGLV--VVLKLQGACGSCPSSTMT 130
LTEE+ +E ++D +RP ++ DGG++ D V L+LQGAC SC SS +T
Sbjct: 146 LTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVT 205
Query: 131 LKMGIETRLRDKIPEILEVEQILDTETGLELNE-ENIEKVL 170
LK GIE+ L+ + E+ EV QI+D E + L E + +EK L
Sbjct: 206 LKYGIESMLKHYVDEVKEVIQIMDPEQEIALKEFDKLEKKL 246
>sp|B4JWR9|NFU1_DROGR NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1
Length = 298
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG++ + VV LK+QG+C SCPSS +TLK G++ L+ I
Sbjct: 194 IKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 253
Query: 144 PEILEVEQILDTETGLELNE-ENIEKVLAE 172
PE+ VEQ+ D + +E E EK L +
Sbjct: 254 PEVESVEQVFDEVDKVANSEFERFEKSLKQ 283
>sp|Q9QZ23|NFU1_MOUSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus
musculus GN=Nfu1 PE=1 SV=2
Length = 255
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 85 VERVLD-EVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKI 143
++ +LD +RP + DGG+V + +V LKLQG+C SCPSS +TLK GI+ L+ I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 232
Query: 144 PEILEVEQILDTETGLE 160
PE+ VEQ++D + E
Sbjct: 233 PEVEGVEQVMDDDESDE 249
>sp|Q9UUB8|YH9J_SCHPO NifU-like protein C1709.19c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC1709.19c PE=3 SV=1
Length = 260
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 92 VRPGLMADGGNVALHEIDGLV--VVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 149
+RP + DGG+V D V LKL+GAC +C SS +TLK GI+ L+ IPE+ V
Sbjct: 169 IRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPEVENV 228
Query: 150 EQILDTETGLELNE 163
Q+LD E + + E
Sbjct: 229 VQVLDPEEEVAIAE 242
>sp|Q6FDB8|NFUA_ACIAD Fe/S biogenesis protein NfuA OS=Acinetobacter sp. (strain ADP1)
GN=nfuA PE=3 SV=1
Length = 212
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEI-----DGLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + +L E+ PGL GGN AL E+ +GL VLK G C C + +TLK G+
Sbjct: 124 EERITYILQSEINPGLAGHGGNCALVEVQDDPENGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET LR +IPE+ V
Sbjct: 184 ETTLRQQIPELQRV 197
>sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4
PE=2 SV=1
Length = 283
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 92 VRPGLMADGGNVALHEID--GLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 149
+RP + DGG++ D +V L++QGAC CPSS++TLK GIE L + E+ V
Sbjct: 204 IRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 263
Query: 150 EQILDTE 156
EQ D E
Sbjct: 264 EQEFDGE 270
>sp|Q9C8J2|NIFU5_ARATH NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5
PE=2 SV=1
Length = 275
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 92 VRPGLMADGGNVALHEIDGL--VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 149
+RP + DGG++ D +V L++QGAC CPSS++TLK GIE L + E+ V
Sbjct: 199 IRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 258
Query: 150 EQILDTE 156
EQ D E
Sbjct: 259 EQEFDGE 265
>sp|C5BJC0|NFUA_TERTT Fe/S biogenesis protein NfuA OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=nfuA PE=3 SV=1
Length = 194
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 82 EENVERVL-DEVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIETRL 139
E+ + VL +EV PGL + GGNV+L + D + +L+ G C C + MTLK G+E L
Sbjct: 111 EDKINYVLYNEVNPGLASHGGNVSLERLTDDGMAILRFGGGCQGCSAVDMTLKQGVEKTL 170
Query: 140 RDKIPEILEVEQILD 154
++IPE+ V + D
Sbjct: 171 MERIPELAGVRDVTD 185
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 132 KMGIETRLR---DKIPEILEVEQILDTETGLELNEENIEKVLA-EIRPYLAGTGGGILEL 187
KMG + +R K+P+I + I E+ I VL E+ P LA GG +
Sbjct: 87 KMGGQLTIRAPNSKMPKISDDSPI----------EDKINYVLYNEVNPGLASHGGNVSLE 136
Query: 188 IQIDDYVVRVRLSGPAAGV----MTVRVALTQKLREKIPSIAAVQ 228
DD + +R G G MT++ + + L E+IP +A V+
Sbjct: 137 RLTDDGMAILRFGGGCQGCSAVDMTLKQGVEKTLMERIPELAGVR 181
>sp|B0V9L0|NFUA_ACIBY Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
AYE) GN=nfuA PE=3 SV=1
Length = 212
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET L++ IPE+ V
Sbjct: 184 ETTLKEHIPELQRV 197
>sp|A3M3B7|NFUA_ACIBT Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
ATCC 17978 / NCDC KC 755) GN=nfuA PE=3 SV=2
Length = 212
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET L++ IPE+ V
Sbjct: 184 ETTLKEHIPELQRV 197
>sp|B2HVD2|NFUA_ACIBC Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
ACICU) GN=nfuA PE=3 SV=1
Length = 212
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET L++ IPE+ V
Sbjct: 184 ETTLKEHIPELQRV 197
>sp|B7I8Q3|NFUA_ACIB5 Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
AB0057) GN=nfuA PE=3 SV=1
Length = 212
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET L++ IPE+ V
Sbjct: 184 ETTLKEHIPELQRV 197
>sp|B7GXX8|NFUA_ACIB3 Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
AB307-0294) GN=nfuA PE=3 SV=1
Length = 212
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEV 149
ET L++ IPE+ V
Sbjct: 184 ETTLKEHIPELQRV 197
>sp|Q056Z1|NFUA_BUCCC Fe/S biogenesis protein NfuA OS=Buchnera aphidicola subsp. Cinara
cedri (strain Cc) GN=nfuA PE=3 SV=1
Length = 193
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 91 EVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 149
++ P L+ GG+VAL++I D VV LK G C C +TLK GIE +L PEI V
Sbjct: 120 QINPKLLLHGGSVALYDITDSGVVFLKFSGGCNGCSMIDITLKKGIEKKLIKNFPEISSV 179
Query: 150 EQILDTETG 158
E + +G
Sbjct: 180 EDVTHHISG 188
>sp|B0VSR5|NFUA_ACIBS Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
SDF) GN=nfuA PE=3 SV=1
Length = 212
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 82 EENVERVLD-EVRPGLMADGGNVALHEID-----GLVVVLKLQGACGSCPSSTMTLKMGI 135
EE + VL E+ PGL GGN +L E+ GL VLK G C C + +TLK G+
Sbjct: 124 EERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLKQGV 183
Query: 136 ETRLRDKIPEILEVEQILD 154
ET L++ ILE+++++D
Sbjct: 184 ETTLKE---HILELQRVVD 199
>sp|Q2P1A3|NFUA_XANOM Fe/S biogenesis protein NfuA OS=Xanthomonas oryzae pv. oryzae
(strain MAFF 311018) GN=nfuA PE=3 SV=1
Length = 199
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEI--DGLVVVLKLQGACGSCPSSTMTLKMGIETR 138
VERV +E+ P L + GG VA+ E+ DG VV+L+ G C C + +TLK GIE
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSADG-VVLLRFGGGCHGCGMADVTLKQGIEKT 168
Query: 139 LRDKIPEILEVEQILDTETG 158
L ++P ++ V D TG
Sbjct: 169 LMGRVPGVIAVRDATDHATG 188
>sp|B2STN5|NFUA_XANOP Fe/S biogenesis protein NfuA OS=Xanthomonas oryzae pv. oryzae
(strain PXO99A) GN=nfuA PE=3 SV=1
Length = 199
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEI--DGLVVVLKLQGACGSCPSSTMTLKMGIETR 138
VERV +E+ P L + GG VA+ E+ DG VV+L+ G C C + +TLK GIE
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSADG-VVLLRFGGGCHGCGMADVTLKQGIEKT 168
Query: 139 LRDKIPEILEVEQILDTETG 158
L ++P ++ V D TG
Sbjct: 169 LMGRVPGVIAVRDATDHATG 188
>sp|P05340|NIFU_AZOVI Nitrogen fixation protein NifU OS=Azotobacter vinelandii GN=nifU
PE=3 SV=2
Length = 312
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 85 VERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIP 144
+E VL +RP L D G+V L ++DG V +KL GAC C ++MTL GI+ RL +++
Sbjct: 236 IETVLAAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTLG-GIQQRLIEELG 294
Query: 145 EILEV 149
E ++V
Sbjct: 295 EFVKV 299
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 166 IEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVAL---TQKLREKIP 222
IE VLA IRP L G + ELI +D V V+L+G G + L Q+L E++
Sbjct: 236 IETVLAAIRPTLQRDKGDV-ELIDVDGKNVYVKLTGACTGCQMASMTLGGIQQRLIEELG 294
Query: 223 SIAAV 227
V
Sbjct: 295 EFVKV 299
>sp|Q3BSV3|NFUA_XANC5 Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=nfuA PE=3 SV=1
Length = 199
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEI--DGLVVVLKLQGACGSCPSSTMTLKMGIETR 138
VERV +E+ P L + GG VA+ E+ DG VV+L+ G C C + +TLK GIE
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSADG-VVLLRFGGGCHGCGMADVTLKQGIEKT 168
Query: 139 LRDKIPEILEVEQILDTETG 158
L ++P + V D TG
Sbjct: 169 LMGRVPGVTAVRDATDHATG 188
>sp|Q8E8P2|NFUA_SHEON Fe/S biogenesis protein NfuA OS=Shewanella oneidensis (strain MR-1)
GN=nfuA PE=3 SV=1
Length = 192
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 79 PLTEENVERVLDEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIET 137
PL E + E+ P L + GGN+ L EI G V VL+ G C C +TLK GIE
Sbjct: 106 PLVERIEYVIQSEINPQLASHGGNIMLVEITGEGVAVLQFGGGCNGCSQVDITLKDGIEK 165
Query: 138 RLRDKIP-EILEVEQILDTETG 158
+L D P E+ V + D + G
Sbjct: 166 QLLDMFPGELTGVRDVTDHQHG 187
>sp|Q9I2P8|NFUA_PSEAE Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=nfuA PE=3
SV=1
Length = 194
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 79 PLTEENVERVLDEVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIET 137
P+TE + E+ PGL + GG V+L ++ + + VL+ G C C MTLK G+E
Sbjct: 109 PITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEK 168
Query: 138 RLRDKIPEILEVEQILD 154
L ++IPE+ V + D
Sbjct: 169 TLIERIPELKGVRDVTD 185
>sp|Q02KZ2|NFUA_PSEAB Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=nfuA PE=3 SV=1
Length = 194
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 79 PLTEENVERVLDEVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIET 137
P+TE + E+ PGL + GG V+L ++ + + VL+ G C C MTLK G+E
Sbjct: 109 PITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEK 168
Query: 138 RLRDKIPEILEVEQILD 154
L ++IPE+ V + D
Sbjct: 169 TLIERIPELKGVRDVTD 185
>sp|B7VB28|NFUA_PSEA8 Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain
LESB58) GN=nfuA PE=3 SV=1
Length = 194
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 79 PLTEENVERVLDEVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIET 137
P+TE + E+ PGL + GG V+L ++ + + VL+ G C C MTLK G+E
Sbjct: 109 PITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEK 168
Query: 138 RLRDKIPEILEVEQILD 154
L ++IPE+ V + D
Sbjct: 169 TLIERIPELKGVRDVTD 185
>sp|A6V6X0|NFUA_PSEA7 Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain PA7)
GN=nfuA PE=3 SV=1
Length = 194
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 79 PLTEENVERVLDEVRPGLMADGGNVALHEI-DGLVVVLKLQGACGSCPSSTMTLKMGIET 137
P+TE + E+ PGL + GG V+L ++ + + VL+ G C C MTLK G+E
Sbjct: 109 PITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEK 168
Query: 138 RLRDKIPEILEVEQILD 154
L ++IPE+ V + D
Sbjct: 169 TLIERIPELKGVRDVTD 185
>sp|B0RTH4|NFUA_XANCB Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain B100) GN=nfuA PE=3 SV=1
Length = 199
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 88 VLDEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEI 146
V +E+ P L + GG VA+ E+ VV+L+ G C C + +TLK GIE L ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 147 LEVEQILDTETG 158
+ V D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|Q8P8Z9|NFUA_XANCP Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=nfuA PE=3 SV=1
Length = 199
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIETRL 139
VERV +E+ P L + GG VA+ E+ VV+L+ G C C + +TLK GIE L
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTL 169
Query: 140 RDKIPEILEVEQILDTETG 158
++P ++ V D TG
Sbjct: 170 MGRLPGVIAVRDATDHATG 188
>sp|Q4UUW4|NFUA_XANC8 Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=nfuA PE=3 SV=1
Length = 199
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIETRL 139
VERV +E+ P L + GG VA+ E+ VV+L+ G C C + +TLK GIE L
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTL 169
Query: 140 RDKIPEILEVEQILDTETG 158
++P ++ V D TG
Sbjct: 170 MGRLPGVIAVRDATDHATG 188
>sp|P23121|NIFU_AZOCH Nitrogen fixation protein NifU OS=Azotobacter chroococcum mcd 1
GN=nifU PE=3 SV=1
Length = 309
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 85 VERVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIP 144
+E VL +RP L D G+V L ++DG + +KL GAC C ++MTL GI+ RL +++
Sbjct: 234 IETVLAAIRPTLQRDKGDVELIDVDGKNIYVKLTGACTGCQMASMTLG-GIQQRLIEELG 292
Query: 145 EILEV 149
E ++V
Sbjct: 293 EFVKV 297
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 166 IEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVAL 213
IE VLA IRP L G + ELI +D + V+L+G G + L
Sbjct: 234 IETVLAAIRPTLQRDKGDV-ELIDVDGKNIYVKLTGACTGCQMASMTL 280
>sp|Q8PKQ2|NFUA_XANAC Fe/S biogenesis protein NfuA OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=nfuA PE=3 SV=1
Length = 199
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIETRL 139
VERV +E+ P L + GG VA+ E+ VV+L+ G C C + +TLK GIE L
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTL 169
Query: 140 RDKIPEILEVEQILDTETG 158
++P + V D TG
Sbjct: 170 MGRVPGVTAVRDATDHATG 188
>sp|B4SPV3|NFUA_STRM5 Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain R551-3) GN=nfuA PE=3 SV=1
Length = 199
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 85 VERVL----DEVRPGLMADGGNVALHEIDGL-VVVLKLQGACGSCPSSTMTLKMGIETRL 139
VERV +E+ P L + GG VA+ E+ VV+L+ G C C + +TLK GIE L
Sbjct: 110 VERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIEKTL 169
Query: 140 RDKIPEILEVEQILDTETG 158
++P + V D ++G
Sbjct: 170 MGRVPGVTAVRDATDHDSG 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,505,410
Number of Sequences: 539616
Number of extensions: 3175400
Number of successful extensions: 11282
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 10868
Number of HSP's gapped (non-prelim): 384
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)