Query 038452
Match_columns 438
No_of_seqs 278 out of 1685
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 11:12:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00332 Glyco_hydro_17: Glyco 100.0 1.3E-83 2.9E-88 643.0 17.6 295 28-333 1-310 (310)
2 COG5309 Exo-beta-1,3-glucanase 100.0 1.6E-40 3.5E-45 317.0 21.7 244 24-325 42-305 (305)
3 smart00768 X8 Possibly involve 100.0 1.3E-29 2.8E-34 207.8 8.3 85 352-437 1-85 (85)
4 PF07983 X8: X8 domain; Inter 99.9 1.1E-22 2.4E-27 164.0 5.8 72 352-424 1-78 (78)
5 PF07745 Glyco_hydro_53: Glyco 98.7 4.9E-07 1.1E-11 91.8 15.8 217 59-330 65-328 (332)
6 PF03198 Glyco_hydro_72: Gluca 97.9 0.0002 4.3E-09 71.9 13.9 150 28-196 30-217 (314)
7 COG3867 Arabinogalactan endo-1 97.8 0.00031 6.8E-09 69.6 12.9 188 101-333 170-390 (403)
8 smart00633 Glyco_10 Glycosyl h 97.4 0.011 2.3E-07 58.0 17.8 211 56-329 20-249 (254)
9 PF00150 Cellulase: Cellulase 97.0 0.018 3.9E-07 55.8 14.6 86 56-141 66-165 (281)
10 PF11790 Glyco_hydro_cc: Glyco 96.7 0.082 1.8E-06 51.4 16.3 162 101-326 64-231 (239)
11 PRK10150 beta-D-glucuronidase; 96.7 0.15 3.3E-06 56.1 20.1 229 46-331 319-585 (604)
12 PF02836 Glyco_hydro_2_C: Glyc 85.1 42 0.00091 33.3 15.7 86 27-112 17-132 (298)
13 PF00232 Glyco_hydro_1: Glycos 77.7 1.3 2.8E-05 47.2 1.9 71 243-324 353-430 (455)
14 PF02449 Glyco_hydro_42: Beta- 76.0 43 0.00093 34.5 12.6 60 55-114 50-140 (374)
15 PF02055 Glyco_hydro_30: O-Gly 64.6 2.2E+02 0.0047 31.0 15.2 93 55-147 157-278 (496)
16 PRK13511 6-phospho-beta-galact 61.4 34 0.00074 36.7 8.4 75 243-326 365-446 (469)
17 TIGR03356 BGL beta-galactosida 60.5 35 0.00075 36.2 8.2 75 243-326 335-414 (427)
18 PF04909 Amidohydro_2: Amidohy 53.6 31 0.00068 32.7 6.0 89 126-256 85-175 (273)
19 PLN02998 beta-glucosidase 51.5 27 0.00058 37.9 5.6 75 243-326 390-466 (497)
20 PF03662 Glyco_hydro_79n: Glyc 50.4 62 0.0013 33.1 7.7 176 56-261 113-301 (319)
21 KOG0626 Beta-glucosidase, lact 48.5 48 0.001 36.1 6.8 75 242-324 404-486 (524)
22 COG4782 Uncharacterized protei 48.3 58 0.0013 34.0 7.1 60 223-285 125-187 (377)
23 cd02875 GH18_chitobiase Chitob 47.1 79 0.0017 32.6 8.1 85 54-140 66-150 (358)
24 PF14587 Glyco_hydr_30_2: O-Gl 46.3 1.8E+02 0.0038 30.7 10.3 100 55-154 107-233 (384)
25 PLN02814 beta-glucosidase 46.2 70 0.0015 34.8 7.7 75 243-326 385-461 (504)
26 PLN02849 beta-glucosidase 45.0 77 0.0017 34.5 7.9 75 243-326 383-461 (503)
27 cd06418 GH25_BacA-like BacA is 44.3 1.4E+02 0.0031 28.5 8.8 82 55-140 55-142 (212)
28 cd02874 GH18_CFLE_spore_hydrol 38.8 49 0.0011 33.1 4.9 83 54-140 47-138 (313)
29 PF05990 DUF900: Alpha/beta hy 36.9 96 0.0021 29.9 6.5 44 238-284 42-88 (233)
30 PRK09936 hypothetical protein; 34.8 93 0.002 31.5 6.0 49 27-75 21-95 (296)
31 PF01229 Glyco_hydro_39: Glyco 34.5 4.6E+02 0.0099 28.2 11.8 183 105-328 158-350 (486)
32 cd02872 GH18_chitolectin_chito 33.3 1.6E+02 0.0034 30.1 7.7 75 63-138 68-150 (362)
33 TIGR01233 lacG 6-phospho-beta- 31.3 1.7E+02 0.0036 31.5 7.7 49 25-78 69-119 (467)
34 cd04734 OYE_like_3_FMN Old yel 30.3 6.1E+02 0.013 25.9 12.0 128 158-288 64-207 (343)
35 PHA02754 hypothetical protein; 29.9 43 0.00092 25.7 2.1 26 123-148 15-42 (67)
36 cd00598 GH18_chitinase-like Th 29.2 1.1E+02 0.0023 28.2 5.2 82 58-140 55-142 (210)
37 PRK09589 celA 6-phospho-beta-g 28.5 1.3E+02 0.0028 32.4 6.3 74 246-326 368-447 (476)
38 PF07172 GRP: Glycine rich pro 28.0 36 0.00078 28.6 1.6 23 1-23 1-23 (95)
39 smart00481 POLIIIAc DNA polyme 27.7 1.2E+02 0.0025 22.9 4.3 33 41-73 16-62 (67)
40 PF14606 Lipase_GDSL_3: GDSL-l 27.6 3.8E+02 0.0083 25.1 8.5 56 227-284 76-133 (178)
41 PF14488 DUF4434: Domain of un 26.9 59 0.0013 29.9 2.9 21 55-75 68-88 (166)
42 cd06545 GH18_3CO4_chitinase Th 26.5 1.3E+02 0.0028 29.1 5.5 79 57-140 51-133 (253)
43 PF01055 Glyco_hydro_31: Glyco 25.9 3E+02 0.0064 28.8 8.4 134 120-305 41-180 (441)
44 COG2159 Predicted metal-depend 24.6 3E+02 0.0065 27.6 7.8 150 58-259 55-208 (293)
45 PRK09593 arb 6-phospho-beta-gl 23.8 2.2E+02 0.0048 30.7 7.0 74 246-326 369-448 (478)
46 PF15240 Pro-rich: Proline-ric 23.8 52 0.0011 30.9 2.0 24 8-32 2-25 (179)
47 PRK09852 cryptic 6-phospho-bet 23.6 1.9E+02 0.0041 31.2 6.4 73 246-326 366-444 (474)
48 PRK15014 6-phospho-beta-glucos 22.7 1.6E+02 0.0035 31.8 5.7 74 246-326 369-448 (477)
49 cd06150 YjgF_YER057c_UK114_lik 21.6 1.4E+02 0.003 24.8 4.0 29 119-147 26-57 (105)
50 KOG1412 Aspartate aminotransfe 20.5 2.6E+02 0.0056 29.0 6.2 138 32-186 188-373 (410)
No 1
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=100.00 E-value=1.3e-83 Score=643.03 Aligned_cols=295 Identities=50% Similarity=0.885 Sum_probs=241.7
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHhcC---------chHHHHHHhhCCCEEEEEecCCCcccccC-hHHHHHHHHhhcccc
Q 038452 28 IGVNYGTIANNLPKPAEVANFLKTKT---------TIDILRAFANTNISVTVSVGNGDIPALVQ-LPAAKNWVAANIVPF 97 (438)
Q Consensus 28 ~Gvnyg~~~~nlpsp~~vv~ll~s~~---------~~~vL~A~~~tgi~v~vGv~n~~l~~~a~-~~~A~~wv~~~v~~~ 97 (438)
||||||++|+|||+|.+|++|||+++ ++.+|+|+++|||+|++||+|++++++++ +..|..||++||.+|
T Consensus 1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~ 80 (310)
T PF00332_consen 1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY 80 (310)
T ss_dssp EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence 79999999999999999999999976 89999999999999999999999999999 999999999999999
Q ss_pred CCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHHHHcCC-CceeeecccccccccccCCCCCccccCCcchhhhhh
Q 038452 98 YPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGI-KDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAP 176 (438)
Q Consensus 98 ~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL~~~gl-~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~ 176 (438)
+|.++|++|+||||++..... . .|+|+|+|+|++|+++|| ++|||+|+++++++..+||||.|.|++++. ++|++
T Consensus 81 ~~~~~i~~i~VGnEv~~~~~~-~--~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~-~~~~~ 156 (310)
T PF00332_consen 81 LPAVNIRYIAVGNEVLTGTDN-A--YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIA-SVMDP 156 (310)
T ss_dssp TTTSEEEEEEEEES-TCCSGG-G--GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHH-HHHHH
T ss_pred CcccceeeeecccccccCccc-e--eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccch-hhhhH
Confidence 999999999999999987422 2 899999999999999999 689999999999999999999999999987 79999
Q ss_pred HHHHHHhcCCcccccCCCCcccCCC----ccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEee
Q 038452 177 MLEFLRETKSAFMINPYPYFNYADS----ISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252 (438)
Q Consensus 177 ~l~fL~~~~d~~~vNiyPff~~~~~----~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~E 252 (438)
+++||.++++|||+|+||||++..+ ++|||+|+++..++|. +++|+||||+|+|++++||+|+|+++++|+|+|
T Consensus 157 ~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~E 234 (310)
T PF00332_consen 157 LLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGE 234 (310)
T ss_dssp HHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--EEEEE
T ss_pred HHHHhhccCCCceeccchhhhccCCcccCCccccccccccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCceeEEec
Confidence 9999999999999999999999766 8999999998777765 889999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCCCCCcceecccCCCCeeeeee
Q 038452 253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAG 332 (438)
Q Consensus 253 TGWPS~G~~~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~~~E~~wGlf~~d~~~ky~l~ 332 (438)
|||||+|+. +|+++||+.|++++++|+. .|||+||+..+++||||||||+||+|+.+|||||||++||++||+|+
T Consensus 235 TGWPs~G~~---~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~~ 309 (310)
T PF00332_consen 235 TGWPSAGDP---GATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDLD 309 (310)
T ss_dssp E---SSSST---TCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS---
T ss_pred cccccCCCC---CCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCCC
Confidence 999999983 5999999999999999996 79999999999999999999999998779999999999999999998
Q ss_pred c
Q 038452 333 V 333 (438)
Q Consensus 333 ~ 333 (438)
|
T Consensus 310 f 310 (310)
T PF00332_consen 310 F 310 (310)
T ss_dssp -
T ss_pred C
Confidence 6
No 2
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=317.00 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=196.6
Q ss_pred cCccceEEeccCCCC--CCCHHHHHH---HHHhcC------------chHHHHHHhhCCCEEEEEecCCCcccccChHHH
Q 038452 24 TTSAIGVNYGTIANN--LPKPAEVAN---FLKTKT------------TIDILRAFANTNISVTVSVGNGDIPALVQLPAA 86 (438)
Q Consensus 24 ~~~~~Gvnyg~~~~n--lpsp~~vv~---ll~s~~------------~~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~A 86 (438)
+.+..+|+||++.++ +|+.+++.. +|++.+ -++|++|+...|++|+||||..+.-+ ...
T Consensus 42 a~g~~~f~l~~~n~dGtCKSa~~~~sDLe~l~~~t~~IR~Y~sDCn~le~v~pAa~~~g~kv~lGiw~tdd~~----~~~ 117 (305)
T COG5309 42 ASGFLAFTLGPYNDDGTCKSADQVASDLELLASYTHSIRTYGSDCNTLENVLPAAEASGFKVFLGIWPTDDIH----DAV 117 (305)
T ss_pred cccccceeccccCCCCCCcCHHHHHhHHHHhccCCceEEEeeccchhhhhhHHHHHhcCceEEEEEeeccchh----hhH
Confidence 346789999999876 899999985 555544 47899999999999999999754322 222
Q ss_pred HHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCcccc
Q 038452 87 KNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFR 166 (438)
Q Consensus 87 ~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~ 166 (438)
++-+...+.+++.+..|++|+||||+|+|+ ..++++|+.+|..+|.+|+++|+. +||+|+++|.++.+ +
T Consensus 118 ~~til~ay~~~~~~d~v~~v~VGnEal~r~-~~tasql~~~I~~vrsav~~agy~-gpV~T~dsw~~~~~---------n 186 (305)
T COG5309 118 EKTILSAYLPYNGWDDVTTVTVGNEALNRN-DLTASQLIEYIDDVRSAVKEAGYD-GPVTTVDSWNVVIN---------N 186 (305)
T ss_pred HHHHHHHHhccCCCCceEEEEechhhhhcC-CCCHHHHHHHHHHHHHHHHhcCCC-CceeecccceeeeC---------C
Confidence 335667888888889999999999999995 589999999999999999999983 68999999998875 1
Q ss_pred CCcchhhhhhHHHHHHhcCCcccccCCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCC
Q 038452 167 EGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDV 246 (438)
Q Consensus 167 ~~~~~~~~~~~l~fL~~~~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~ 246 (438)
|+ |+++.|++|+|.||||+.... .+ . .+ .++-.|+.-|+.+. | .++
T Consensus 187 p~------------l~~~SDfia~N~~aYwd~~~~-------------a~-~---~~-~f~~~q~e~vqsa~---g-~~k 232 (305)
T COG5309 187 PE------------LCQASDFIAANAHAYWDGQTV-------------AN-A---AG-TFLLEQLERVQSAC---G-TKK 232 (305)
T ss_pred hH------------Hhhhhhhhhcccchhccccch-------------hh-h---hh-HHHHHHHHHHHHhc---C-CCc
Confidence 12 446778899999999996532 11 1 12 24445677776653 2 349
Q ss_pred CEEEeeccCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCC-CC-CCCcceecccC
Q 038452 247 PIVVAETGWPSAGDPRE-SSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKP-GA-TSERNFGLFKQ 323 (438)
Q Consensus 247 ~vvV~ETGWPS~G~~~~-~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~-g~-~~E~~wGlf~~ 323 (438)
+++|+||||||+|..++ +.||++||+.|++++++.+++ .++++|+|++|||+||+ |. ++|+|||++..
T Consensus 233 ~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~~~~---------~G~d~fvfeAFdd~WK~~~~y~VEkywGv~~s 303 (305)
T COG5309 233 TVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNALRS---------CGYDVFVFEAFDDDWKADGSYGVEKYWGVLSS 303 (305)
T ss_pred cEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhhhhc---------cCccEEEeeeccccccCccccchhhceeeecc
Confidence 99999999999999875 489999999999999999886 57999999999999995 54 79999999987
Q ss_pred CC
Q 038452 324 DF 325 (438)
Q Consensus 324 d~ 325 (438)
|+
T Consensus 304 ~~ 305 (305)
T COG5309 304 DR 305 (305)
T ss_pred CC
Confidence 64
No 3
>smart00768 X8 Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges.
Probab=99.96 E-value=1.3e-29 Score=207.84 Aligned_cols=85 Identities=49% Similarity=1.041 Sum_probs=83.0
Q ss_pred eeeeeCCCCChhhhhhhhhhhcCCCCCCCccCCCCCccCCCCchhhHhHHHhHHHHHcCCCCCCCCCCCCceEEEecCCC
Q 038452 352 KFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPS 431 (438)
Q Consensus 352 ~~Cv~~~~~~~~~l~~~ld~aCg~g~dC~~I~~~g~C~~~~t~~~~~sya~N~Yyq~~~~~~~~aCdF~G~a~~~~~~ps 431 (438)
+|||+|+++++++||++|||||++++||++|++||+||+||++++|||||||+|||++++ ...+|||+|+|+++++|||
T Consensus 1 ~wCv~~~~~~~~~l~~~~~yaCg~~~dC~~I~~~g~c~~~~~~~~~aS~a~N~YYq~~~~-~~~aC~F~G~a~~~~~~ps 79 (85)
T smart00768 1 LWCVAKPDADEAALQAALDYACGQGADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQGQ-SSGACDFGGTATITTTDPS 79 (85)
T ss_pred CccccCCCCCHHHHHHHHHHHhcCCCCccccCCCCcccCCCCHHHHHHHHHHHHHHHcCC-CCCcCCCCCceEEEecCCC
Confidence 499999999999999999999998899999999999999999999999999999999999 9999999999999999999
Q ss_pred CCcccc
Q 038452 432 YGSCVY 437 (438)
Q Consensus 432 ~~~C~~ 437 (438)
+++|+|
T Consensus 80 ~~~C~~ 85 (85)
T smart00768 80 TGSCKF 85 (85)
T ss_pred CCccCC
Confidence 999987
No 4
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen [] as well as at the C terminus of family 17 glycosyl hydrolases []. This domain may be involved in carbohydrate binding.; PDB: 2JON_A 2W61_A 2W62_A 2W63_A.
Probab=99.87 E-value=1.1e-22 Score=164.03 Aligned_cols=72 Identities=40% Similarity=0.901 Sum_probs=60.8
Q ss_pred eeeeeCCCCChhhhhhhhhhhcCCC-CCCCccCCCCC-----ccCCCCchhhHhHHHhHHHHHcCCCCCCCCCCCCceE
Q 038452 352 KFCVPRPNTNPQSLQGNLDWVCSQG-IDCAPIQPGGS-----CFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTAL 424 (438)
Q Consensus 352 ~~Cv~~~~~~~~~l~~~ld~aCg~g-~dC~~I~~~g~-----C~~~~t~~~~~sya~N~Yyq~~~~~~~~aCdF~G~a~ 424 (438)
+|||+++++++++|+++|||||+++ +||++|++||. .|++|+.++|||||||+|||++++ ...+|||+|+||
T Consensus 1 l~Cv~~~~~~~~~l~~~l~~aC~~~~~dC~~I~~~g~~G~YG~~S~C~~~~~lSya~N~YY~~~~~-~~~~C~F~G~at 78 (78)
T PF07983_consen 1 LWCVAKPDADDKELQDLLDYACGQGGVDCSPIQPNGTTGVYGAYSMCSPRQHLSYAFNQYYQKQGR-NSSACDFSGNAT 78 (78)
T ss_dssp -EEEE-TTS-HHHHHHHHHHHTTT-SSSCCCC-EETTTTEE-TTTTS-CCHHHHHHHHHHHHHHTS-SCCG-SS-STEE
T ss_pred CcceeCCCCCHHHHHHHHHHHHcCCCCChhhhCCCCcccccccccCCCHHHHHHHHHHHHHHHcCC-CCCcCCCCCCCC
Confidence 5999999999999999999999996 99999999998 566667899999999999999999 999999999996
No 5
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=98.68 E-value=4.9e-07 Score=91.84 Aligned_cols=217 Identities=18% Similarity=0.227 Sum_probs=108.9
Q ss_pred HHHhhCCCEEEEEecCCC---------cc------cccC-hHHHHHHHHhhccccC-CCceEEEEEeccccccC-----C
Q 038452 59 RAFANTNISVTVSVGNGD---------IP------ALVQ-LPAAKNWVAANIVPFY-PSTKIIRVVVGNEIMQS-----A 116 (438)
Q Consensus 59 ~A~~~tgi~v~vGv~n~~---------l~------~~a~-~~~A~~wv~~~v~~~~-p~~~I~~I~VGNEvl~~-----~ 116 (438)
+-+++.||+|+|-.--+| +| ++++ ..+..++.+.-+...- -...+..|-||||+-.. +
T Consensus 65 krak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g 144 (332)
T PF07745_consen 65 KRAKAAGMKVLLDFHYSDFWADPGKQNKPAAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDG 144 (332)
T ss_dssp HHHHHTT-EEEEEE-SSSS--BTTB-B--TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTT
T ss_pred HHHHHCCCeEEEeecccCCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCC
Confidence 445689999999985432 11 1122 2222333333222211 24678899999997543 1
Q ss_pred CcchHHhHHHHHHHHHHHHHHcCCCceeee--cccccccccccCCCCCccccCCcchhhhhhHHHHHHh---cCCccccc
Q 038452 117 NKDWIYNLVPAMKSINNALIEAGIKDIKIS--TPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRE---TKSAFMIN 191 (438)
Q Consensus 117 ~~~~~~~Ll~am~nv~~aL~~~gl~~IkVs--T~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~fL~~---~~d~~~vN 191 (438)
.......+...++...+++++..- ++||- .+...+. ..++-..+.|.+ -=|+++++
T Consensus 145 ~~~~~~~~a~ll~ag~~AVr~~~p-~~kV~lH~~~~~~~------------------~~~~~~f~~l~~~g~d~DviGlS 205 (332)
T PF07745_consen 145 KPSNWDNLAKLLNAGIKAVREVDP-NIKVMLHLANGGDN------------------DLYRWFFDNLKAAGVDFDVIGLS 205 (332)
T ss_dssp CTT-HHHHHHHHHHHHHHHHTHSS-TSEEEEEES-TTSH------------------HHHHHHHHHHHHTTGG-SEEEEE
T ss_pred CccCHHHHHHHHHHHHHHHHhcCC-CCcEEEEECCCCch------------------HHHHHHHHHHHhcCCCcceEEEe
Confidence 223456677777777778877543 34442 2211110 112222333333 24899999
Q ss_pred CCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCCCCCCC-----C----
Q 038452 192 PYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDP-----R---- 262 (438)
Q Consensus 192 iyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWPS~G~~-----~---- 262 (438)
.||||... -+.+...++.+. ++. +|+|+|.|||||..-+. +
T Consensus 206 yYP~w~~~------------------------l~~l~~~l~~l~---~ry---~K~V~V~Et~yp~t~~d~D~~~n~~~~ 255 (332)
T PF07745_consen 206 YYPFWHGT------------------------LEDLKNNLNDLA---SRY---GKPVMVVETGYPWTLDDGDGTGNIIGA 255 (332)
T ss_dssp E-STTST-------------------------HHHHHHHHHHHH---HHH---T-EEEEEEE---SBS--SSSS--SSSS
T ss_pred cCCCCcch------------------------HHHHHHHHHHHH---HHh---CCeeEEEeccccccccccccccccCcc
Confidence 99999841 012333333332 343 58999999999998211 1
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEE-ccCCCC-----CCCCCCCcceecccCCCCeeee
Q 038452 263 -----ESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFA-LFNENK-----KPGATSERNFGLFKQDFTPVYD 330 (438)
Q Consensus 263 -----~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~-lfDE~~-----K~g~~~E~~wGlf~~d~~~ky~ 330 (438)
+..+|++.|+.|++.+++.+.+-.+ +.++-+|+-| ..-..+ ..|...|.. +||+.+|++--.
T Consensus 256 ~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~-----~~g~GvfYWeP~w~~~~~~~~~~~g~~w~n~-~lFD~~g~~l~s 328 (332)
T PF07745_consen 256 TSLISGYPATPQGQADFLRDLINAVKNVPN-----GGGLGVFYWEPAWIPVENGWDWGGGSSWDNQ-ALFDFNGNALPS 328 (332)
T ss_dssp STGGTTS-SSHHHHHHHHHHHHHHHHTS-------TTEEEEEEE-TT-GGGTTHHHHTTTSSSSBG-SSB-TTSBB-GG
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHhcc-----CCeEEEEeeccccccCCcccccCCCCCcccc-ccCCCCCCCchH
Confidence 1136899999999999999876211 2355566554 222222 233334444 899888876433
No 6
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=97.92 E-value=0.0002 Score=71.87 Aligned_cols=150 Identities=20% Similarity=0.278 Sum_probs=77.9
Q ss_pred ceEEeccCCC-------CCCCHHH----HHHHHHhcC-------------c-hHHHHHHhhCCCEEEEEecCCCcccccC
Q 038452 28 IGVNYGTIAN-------NLPKPAE----VANFLKTKT-------------T-IDILRAFANTNISVTVSVGNGDIPALVQ 82 (438)
Q Consensus 28 ~Gvnyg~~~~-------nlpsp~~----vv~ll~s~~-------------~-~~vL~A~~~tgi~v~vGv~n~~l~~~a~ 82 (438)
.||.|-+-++ +..+-.+ -+.+||.++ | ..-+++|++.||-|++.|... -.++..
T Consensus 30 kGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~vdp~~nHd~CM~~~~~aGIYvi~Dl~~p-~~sI~r 108 (314)
T PF03198_consen 30 KGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYSVDPSKNHDECMSAFADAGIYVILDLNTP-NGSINR 108 (314)
T ss_dssp EEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES-BT-TBS--T
T ss_pred eeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEEeCCCCCHHHHHHHHHhCCCEEEEecCCC-CccccC
Confidence 6999988776 2222222 234777766 3 478899999999999999754 223332
Q ss_pred hHHHHHH-------HHhhccccCCCceEEEEEeccccccCC-CcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccc
Q 038452 83 LPAAKNW-------VAANIVPFYPSTKIIRVVVGNEIMQSA-NKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFL 154 (438)
Q Consensus 83 ~~~A~~w-------v~~~v~~~~p~~~I~~I~VGNEvl~~~-~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl 154 (438)
..-+..| +.+-|..+..=.++-+..+||||+... ....++.+-.+++.+|+-+++.+++.|||+-+-+ |+-
T Consensus 109 ~~P~~sw~~~l~~~~~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~IPVGYsaa-D~~ 187 (314)
T PF03198_consen 109 SDPAPSWNTDLLDRYFAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRSIPVGYSAA-DDA 187 (314)
T ss_dssp TS------HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE----T
T ss_pred CCCcCCCCHHHHHHHHHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEcc-CCh
Confidence 0001122 222333332227789999999999863 3346778888999999999999998899986532 110
Q ss_pred cccCCCCCccccCCcchhhhhhHHHHHH-----hcCCcccccCCCCc
Q 038452 155 GVSEPPSAGKFREGYDKDIIAPMLEFLR-----ETKSAFMINPYPYF 196 (438)
Q Consensus 155 ~~s~pPS~g~F~~~~~~~~~~~~l~fL~-----~~~d~~~vNiyPff 196 (438)
+ .-.++.++|. +..|++++|.|-|=
T Consensus 188 -------------~----~r~~~a~Yl~Cg~~~~~iDf~g~N~Y~WC 217 (314)
T PF03198_consen 188 -------------E----IRQDLANYLNCGDDDERIDFFGLNSYEWC 217 (314)
T ss_dssp -------------T----THHHHHHHTTBTT-----S-EEEEE----
T ss_pred -------------h----HHHHHHHHhcCCCcccccceeeeccceec
Confidence 1 1234555653 46689999998554
No 7
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00031 Score=69.65 Aligned_cols=188 Identities=20% Similarity=0.242 Sum_probs=97.5
Q ss_pred ceEEEEEeccccccC-----CCcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhhh
Q 038452 101 TKIIRVVVGNEIMQS-----ANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIA 175 (438)
Q Consensus 101 ~~I~~I~VGNEvl~~-----~~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~ 175 (438)
..+.-|-||||.-.. ++......+..-++.--++++... ..|||--- +++ |-..+.|+- +.+.+-+
T Consensus 170 i~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~-p~ikv~lH-----la~--g~~n~~y~~-~fd~ltk 240 (403)
T COG3867 170 ILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVS-PTIKVALH-----LAE--GENNSLYRW-IFDELTK 240 (403)
T ss_pred CCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcC-CCceEEEE-----ecC--CCCCchhhH-HHHHHHH
Confidence 567889999998532 111123344444444444444322 23554322 222 222334431 1112222
Q ss_pred hHHHHHHhcCCcccccCCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccC
Q 038452 176 PMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGW 255 (438)
Q Consensus 176 ~~l~fL~~~~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGW 255 (438)
.-++| |.|.+--||||...-+ . +...++.+-. + =+|.|+|.||+.
T Consensus 241 ~nvdf-----DVig~SyYpyWhgtl~------------------n------L~~nl~dia~---r---Y~K~VmV~Etay 285 (403)
T COG3867 241 RNVDF-----DVIGSSYYPYWHGTLN------------------N------LTTNLNDIAS---R---YHKDVMVVETAY 285 (403)
T ss_pred cCCCc-----eEEeeeccccccCcHH------------------H------HHhHHHHHHH---H---hcCeEEEEEecc
Confidence 23333 7788999999986421 1 1112222211 1 168999999998
Q ss_pred --------------CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-------------CCCCCCCCcccEEEEEcc-CCC
Q 038452 256 --------------PSAGDPRESSATVDNAASFNWNLIQKVNSGK-------------GTPLMPNKQFETYIFALF-NEN 307 (438)
Q Consensus 256 --------------PS~G~~~~~~as~~na~~y~~~lv~~~~~~~-------------GTP~rp~~~~~~yiF~lf-DE~ 307 (438)
|+.+...+...+++-|++|.+++|..+..-. .-|-++|.++.+-+=+.| .|+
T Consensus 286 ~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~~~GlGvFYWEp~wipv~~g~gwat~~~~~y~~e~ 365 (403)
T COG3867 286 TYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPKSNGLGVFYWEPAWIPVVLGSGWATSYAAKYDPEN 365 (403)
T ss_pred eeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCCCCceEEEEecccceeccCCCccccchhhccCccc
Confidence 5555332235788999999999999987421 123333333333222223 356
Q ss_pred CCCCCCCCcceecccCCCCeeeeeec
Q 038452 308 KKPGATSERNFGLFKQDFTPVYDAGV 333 (438)
Q Consensus 308 ~K~g~~~E~~wGlf~~d~~~ky~l~~ 333 (438)
|+.|..++. =-||+.+|.|--.|++
T Consensus 366 w~~gsavdN-qaLfdf~G~~LPSl~v 390 (403)
T COG3867 366 WGEGSAVDN-QALFDFNGHPLPSLNV 390 (403)
T ss_pred ccCCCccch-hhhhhccCCcCcchhh
Confidence 766643332 2577777766555544
No 8
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=97.43 E-value=0.011 Score=58.00 Aligned_cols=211 Identities=15% Similarity=0.153 Sum_probs=112.9
Q ss_pred HHHHHHhhCCCEEEE--EecCCCccccc------C-hHHHHHHHHhhccccCCCceEEEEEeccccccCCCc----chHH
Q 038452 56 DILRAFANTNISVTV--SVGNGDIPALV------Q-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANK----DWIY 122 (438)
Q Consensus 56 ~vL~A~~~tgi~v~v--Gv~n~~l~~~a------~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~----~~~~ 122 (438)
.+++.++..||+|-- -+|....+.-. + ...-.++|++.+..| . .+|..+=|.||++..... ....
T Consensus 20 ~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~~~~~~~~~~~~~i~~v~~ry-~-g~i~~wdV~NE~~~~~~~~~~~~~w~ 97 (254)
T smart00633 20 AIVNFAKENGIKVRGHTLVWHSQTPDWVFNLSKETLLARLENHIKTVVGRY-K-GKIYAWDVVNEALHDNGSGLRRSVWY 97 (254)
T ss_pred HHHHHHHHCCCEEEEEEEeecccCCHhhhcCCHHHHHHHHHHHHHHHHHHh-C-CcceEEEEeeecccCCCcccccchHH
Confidence 466778889999722 15654444321 1 233456677766665 3 458999999999865211 0121
Q ss_pred hHH--HHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhhhhHHHHHHhcCCcc---cccCCCCcc
Q 038452 123 NLV--PAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAF---MINPYPYFN 197 (438)
Q Consensus 123 ~Ll--~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~fL~~~~d~~---~vNiyPff~ 197 (438)
..+ .+|....++.+++. .++|+-.-+ .++.. ++. ....+..+++.|.+.+-++ ++..|-+..
T Consensus 98 ~~~G~~~i~~af~~ar~~~-P~a~l~~Nd-y~~~~---~~~--------k~~~~~~~v~~l~~~g~~iDgiGlQ~H~~~~ 164 (254)
T smart00633 98 QILGEDYIEKAFRYAREAD-PDAKLFYND-YNTEE---PNA--------KRQAIYELVKKLKAKGVPIDGIGLQSHLSLG 164 (254)
T ss_pred HhcChHHHHHHHHHHHHhC-CCCEEEEec-cCCcC---ccH--------HHHHHHHHHHHHHHCCCccceeeeeeeecCC
Confidence 222 23334334333333 223332211 11111 110 0123455666666654432 222221100
Q ss_pred cCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCCCCCCCCCCCCCHHHHHHHHHH
Q 038452 198 YADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWN 277 (438)
Q Consensus 198 ~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWPS~G~~~~~~as~~na~~y~~~ 277 (438)
+.+ ++.+...|++++--+++|.|||.+-|..+ +.+.|+.++++
T Consensus 165 -------------------------~~~-----~~~~~~~l~~~~~~g~pi~iTE~dv~~~~-------~~~~qA~~~~~ 207 (254)
T smart00633 165 -------------------------SPN-----IAEIRAALDRFASLGLEIQITELDISGYP-------NPQAQAADYEE 207 (254)
T ss_pred -------------------------CCC-----HHHHHHHHHHHHHcCCceEEEEeecCCCC-------cHHHHHHHHHH
Confidence 001 22334444554445899999999988742 34888999999
Q ss_pred HHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCcceecccCCCCeee
Q 038452 278 LIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFGLFKQDFTPVY 329 (438)
Q Consensus 278 lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wGlf~~d~~~ky 329 (438)
++..+.+. | + ....++..+.|. .|.++ .+-|||+.|++||-
T Consensus 208 ~l~~~~~~---p---~-v~gi~~Wg~~d~~~W~~~----~~~~L~d~~~~~kp 249 (254)
T smart00633 208 VFKACLAH---P---A-VTGVTVWGVTDKYSWLDG----GAPLLFDANYQPKP 249 (254)
T ss_pred HHHHHHcC---C---C-eeEEEEeCCccCCcccCC----CCceeECCCCCCCh
Confidence 99988763 2 1 234555566653 45543 46799999998874
No 9
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=97.03 E-value=0.018 Score=55.81 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=55.0
Q ss_pred HHHHHHhhCCCEEEEEecCC-C---cc-cccChHHHHHHHHh---hccccC-CCceEEEEEeccccccCCCc-----chH
Q 038452 56 DILRAFANTNISVTVSVGNG-D---IP-ALVQLPAAKNWVAA---NIVPFY-PSTKIIRVVVGNEIMQSANK-----DWI 121 (438)
Q Consensus 56 ~vL~A~~~tgi~v~vGv~n~-~---l~-~~a~~~~A~~wv~~---~v~~~~-p~~~I~~I~VGNEvl~~~~~-----~~~ 121 (438)
.+|++++..||.|+|.+... . -. ..........|+++ .+...+ ....|.++=+.||+...... ...
T Consensus 66 ~~v~~a~~~gi~vild~h~~~~w~~~~~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~ 145 (281)
T PF00150_consen 66 RIVDAAQAYGIYVILDLHNAPGWANGGDGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNP 145 (281)
T ss_dssp HHHHHHHHTT-EEEEEEEESTTCSSSTSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHT
T ss_pred HHHHHHHhCCCeEEEEeccCccccccccccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccc
Confidence 58999999999999998764 0 11 11112223333322 232333 33457899999999876321 134
Q ss_pred HhHHHHHHHHHHHHHHcCCC
Q 038452 122 YNLVPAMKSINNALIEAGIK 141 (438)
Q Consensus 122 ~~Ll~am~nv~~aL~~~gl~ 141 (438)
..+.+.++.+.+++++.+-+
T Consensus 146 ~~~~~~~~~~~~~Ir~~~~~ 165 (281)
T PF00150_consen 146 ADWQDWYQRAIDAIRAADPN 165 (281)
T ss_dssp HHHHHHHHHHHHHHHHTTSS
T ss_pred hhhhhHHHHHHHHHHhcCCc
Confidence 67889999999999999873
No 10
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=96.72 E-value=0.082 Score=51.43 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=89.8
Q ss_pred ceEEEEEeccccccCC-CcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhhhhHHH
Q 038452 101 TKIIRVVVGNEIMQSA-NKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLE 179 (438)
Q Consensus 101 ~~I~~I~VGNEvl~~~-~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~ 179 (438)
..+++|..=||+=... ...++++.+...+++.+.|+.. .||+..|.... ...-+|+.. .-|. +
T Consensus 64 ~~~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~~---~~~l~sPa~~~--~~~~~~~g~--------~Wl~---~ 127 (239)
T PF11790_consen 64 PGSKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRSP---GVKLGSPAVAF--TNGGTPGGL--------DWLS---Q 127 (239)
T ss_pred cCccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhcC---CcEEECCeecc--cCCCCCCcc--------HHHH---H
Confidence 4578899999975542 2356777777777766666643 46776663210 000001111 1233 3
Q ss_pred HHHh-----cCCcccccCCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeecc
Q 038452 180 FLRE-----TKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETG 254 (438)
Q Consensus 180 fL~~-----~~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETG 254 (438)
|+.. ..|++.||.| . .+ ++...+.+....++.| +||+|||.|
T Consensus 128 F~~~~~~~~~~D~iavH~Y---~--~~-------------------------~~~~~~~i~~~~~~~~---kPIWITEf~ 174 (239)
T PF11790_consen 128 FLSACARGCRVDFIAVHWY---G--GD-------------------------ADDFKDYIDDLHNRYG---KPIWITEFG 174 (239)
T ss_pred HHHhcccCCCccEEEEecC---C--cC-------------------------HHHHHHHHHHHHHHhC---CCEEEEeec
Confidence 3333 3455555544 1 00 1222222333334443 999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCCCCCcceecccCCCC
Q 038452 255 WPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFT 326 (438)
Q Consensus 255 WPS~G~~~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~~~E~~wGlf~~d~~ 326 (438)
+...+. ..+.+.++.|++..+..+.+. |. --.+++|. |-..+. .+..+-.|++.+|+
T Consensus 175 ~~~~~~----~~~~~~~~~fl~~~~~~ld~~------~~-VeryawF~-~~~~~~---~~~~~~~L~~~~G~ 231 (239)
T PF11790_consen 175 CWNGGS----QGSDEQQASFLRQALPWLDSQ------PY-VERYAWFG-FMNDGS---GVNPNSALLDADGS 231 (239)
T ss_pred ccCCCC----CCCHHHHHHHHHHHHHHHhcC------CC-eeEEEecc-cccccC---CCccccccccCCCC
Confidence 877322 378899999999999998753 21 34577777 322222 34455566666664
No 11
>PRK10150 beta-D-glucuronidase; Provisional
Probab=96.71 E-value=0.15 Score=56.08 Aligned_cols=229 Identities=12% Similarity=0.118 Sum_probs=123.1
Q ss_pred HHHHHhcC-----------chHHHHHHhhCCCEEEEEecCCC---------------ccccc------C-hHHHHHHHHh
Q 038452 46 ANFLKTKT-----------TIDILRAFANTNISVTVSVGNGD---------------IPALV------Q-LPAAKNWVAA 92 (438)
Q Consensus 46 v~ll~s~~-----------~~~vL~A~~~tgi~v~vGv~n~~---------------l~~~a------~-~~~A~~wv~~ 92 (438)
++++|..+ ++..+.++-..||-|+.=++... .+... + .....+-++.
T Consensus 319 ~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (604)
T PRK10150 319 HNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVGLNLSFGAGLEAGNKPKETYSEEAVNGETQQAHLQAIRE 398 (604)
T ss_pred HHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcEEEEecccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 45677766 67899999999999886543210 00110 1 2223333556
Q ss_pred hccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchh
Q 038452 93 NIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKD 172 (438)
Q Consensus 93 ~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~ 172 (438)
-|..+...-.|..=.+|||.-... ......++.+.+.+++..-. =+|+.+..+. . .|.. ..
T Consensus 399 mv~r~~NHPSIi~Ws~gNE~~~~~-----~~~~~~~~~l~~~~k~~Dpt-R~vt~~~~~~---~--~~~~----~~---- 459 (604)
T PRK10150 399 LIARDKNHPSVVMWSIANEPASRE-----QGAREYFAPLAELTRKLDPT-RPVTCVNVMF---A--TPDT----DT---- 459 (604)
T ss_pred HHHhccCCceEEEEeeccCCCccc-----hhHHHHHHHHHHHHHhhCCC-CceEEEeccc---C--Cccc----cc----
Confidence 666654445688999999964321 12223444444555444321 1344432110 0 0100 00
Q ss_pred hhhhHHHHHHhcCCcccccCCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEee
Q 038452 173 IIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252 (438)
Q Consensus 173 ~~~~~l~fL~~~~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~E 252 (438)
+....|.+..|.|+=|-.... +.. .....++..++... ++ + ++|++|+|
T Consensus 460 --------~~~~~Dv~~~N~Y~~wy~~~~--~~~---------------~~~~~~~~~~~~~~---~~--~-~kP~~isE 508 (604)
T PRK10150 460 --------VSDLVDVLCLNRYYGWYVDSG--DLE---------------TAEKVLEKELLAWQ---EK--L-HKPIIITE 508 (604)
T ss_pred --------ccCcccEEEEcccceecCCCC--CHH---------------HHHHHHHHHHHHHH---Hh--c-CCCEEEEc
Confidence 112347789998753321100 000 01112333332211 11 2 89999999
Q ss_pred ccCCCCCCCC---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCC--CCCcceecccCCCCe
Q 038452 253 TGWPSAGDPR---ESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGA--TSERNFGLFKQDFTP 327 (438)
Q Consensus 253 TGWPS~G~~~---~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~--~~E~~wGlf~~d~~~ 327 (438)
.|+.+.-+.. ...-|.+.|..|++...+.+.+ +|. -.-.||..+||-....|. ....+.||++.||+|
T Consensus 509 yg~~~~~~~h~~~~~~~~ee~q~~~~~~~~~~~~~------~p~-~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~dr~~ 581 (604)
T PRK10150 509 YGADTLAGLHSMYDDMWSEEYQCAFLDMYHRVFDR------VPA-VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQP 581 (604)
T ss_pred cCCccccccccCCCCCCCHHHHHHHHHHHHHHHhc------CCc-eEEEEEEeeeccCCCCCCcccCCCcceeEcCCCCC
Confidence 9976632111 1134788899988877776653 232 456899999996554331 123478999999999
Q ss_pred eeee
Q 038452 328 VYDA 331 (438)
Q Consensus 328 ky~l 331 (438)
|-..
T Consensus 582 k~~~ 585 (604)
T PRK10150 582 KSAA 585 (604)
T ss_pred hHHH
Confidence 9644
No 12
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=85.14 E-value=42 Score=33.30 Aligned_cols=86 Identities=14% Similarity=0.018 Sum_probs=49.5
Q ss_pred cceEEeccCCCC---CCCHHHHH---HHHHhcC-----------chHHHHHHhhCCCEEEEEecCCC---cccc------
Q 038452 27 AIGVNYGTIANN---LPKPAEVA---NFLKTKT-----------TIDILRAFANTNISVTVSVGNGD---IPAL------ 80 (438)
Q Consensus 27 ~~Gvnyg~~~~n---lpsp~~vv---~ll~s~~-----------~~~vL~A~~~tgi~v~vGv~n~~---l~~~------ 80 (438)
..|||+...... .++.+... +++|..+ ++..+.++-..||-|+.-++... ....
T Consensus 17 l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~~~~~~~~~~~~~~~~ 96 (298)
T PF02836_consen 17 LRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPLEGHGSWQDFGNCNYD 96 (298)
T ss_dssp EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-BSCTSSSSTSCTSCT
T ss_pred EEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccccccCccccCCccccC
Confidence 358998764322 24455444 4667665 78999999999999998876511 1111
Q ss_pred ---cC-hHHHHHHHHhhccccCCCceEEEEEecccc
Q 038452 81 ---VQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEI 112 (438)
Q Consensus 81 ---a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEv 112 (438)
.. ...+.+.+++.|..+...-.|..=.+|||.
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~ 132 (298)
T PF02836_consen 97 ADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES 132 (298)
T ss_dssp TTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC
Confidence 11 334445566666665433458888899998
No 13
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=77.68 E-value=1.3 Score=47.20 Aligned_cols=71 Identities=17% Similarity=0.368 Sum_probs=37.9
Q ss_pred CCCCCEEEeeccCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHhcCCCCCCCCCCc-ccEEEEEccCC-CCCCCCCCC
Q 038452 243 YSDVPIVVAETGWPSAGDPRESSA-----TVDNAASFNWNLIQKVNSGKGTPLMPNKQ-FETYIFALFNE-NKKPGATSE 315 (438)
Q Consensus 243 ~~~~~vvV~ETGWPS~G~~~~~~a-----s~~na~~y~~~lv~~~~~~~GTP~rp~~~-~~~yiF~lfDE-~~K~g~~~E 315 (438)
+++++|+|+|.|++....... +. -++--+.++..+.+.+.+ | .+ .-+|..++.|- .|.. +..
T Consensus 353 Y~~~pI~ITENG~~~~~~~~~-~~v~D~~Ri~yl~~hl~~v~~Ai~d--G------v~V~GY~~WSl~Dn~Ew~~--Gy~ 421 (455)
T PF00232_consen 353 YGNPPIYITENGIGDPDEVDD-GKVDDDYRIDYLQDHLNQVLKAIED--G------VNVRGYFAWSLLDNFEWAE--GYK 421 (455)
T ss_dssp HTSSEEEEEEE---EETTCTT-SHBSHHHHHHHHHHHHHHHHHHHHT--T-------EEEEEEEETSB---BGGG--GGG
T ss_pred cCCCcEEEecccccccccccc-cCcCcHHHHHHHHHHHHHHHhhhcc--C------CCeeeEeeecccccccccc--Ccc
Confidence 667999999999988764322 11 112234445555555533 3 23 34667777774 3333 478
Q ss_pred cceecccCC
Q 038452 316 RNFGLFKQD 324 (438)
Q Consensus 316 ~~wGlf~~d 324 (438)
+.|||++.|
T Consensus 422 ~rfGl~~VD 430 (455)
T PF00232_consen 422 KRFGLVYVD 430 (455)
T ss_dssp SE--SEEEE
T ss_pred CccCceEEc
Confidence 999999988
No 14
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=76.02 E-value=43 Score=34.49 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=37.6
Q ss_pred hHHHHHHhhCCCEEEEEecCCCcc----------------------------cccC---hHHHHHHHHhhccccCCCceE
Q 038452 55 IDILRAFANTNISVTVSVGNGDIP----------------------------ALVQ---LPAAKNWVAANIVPFYPSTKI 103 (438)
Q Consensus 55 ~~vL~A~~~tgi~v~vGv~n~~l~----------------------------~~a~---~~~A~~wv~~~v~~~~p~~~I 103 (438)
..+|..++..||+|+|+++....+ .+.+ ...+.+.+++-+..|-..-.|
T Consensus 50 D~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~v 129 (374)
T PF02449_consen 50 DRVLDLAAKHGIKVILGTPTAAPPAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAV 129 (374)
T ss_dssp HHHHHHHHCTT-EEEEEECTTTS-HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTE
T ss_pred HHHHHHHHhccCeEEEEecccccccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceE
Confidence 357788889999999999632110 1111 233455555555555444579
Q ss_pred EEEEecccccc
Q 038452 104 IRVVVGNEIMQ 114 (438)
Q Consensus 104 ~~I~VGNEvl~ 114 (438)
.++-|.||.-.
T Consensus 130 i~~~i~NE~~~ 140 (374)
T PF02449_consen 130 IGWQIDNEPGY 140 (374)
T ss_dssp EEEEECCSTTC
T ss_pred EEEEeccccCc
Confidence 99999999765
No 15
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=64.57 E-value=2.2e+02 Score=31.02 Aligned_cols=93 Identities=24% Similarity=0.197 Sum_probs=55.9
Q ss_pred hHHHHHHh-hCCCEEEEEecC--------CCcc---ccc----C--hHHHHHHHHhhccccCC-CceEEEEEeccccccC
Q 038452 55 IDILRAFA-NTNISVTVSVGN--------GDIP---ALV----Q--LPAAKNWVAANIVPFYP-STKIIRVVVGNEIMQS 115 (438)
Q Consensus 55 ~~vL~A~~-~tgi~v~vGv~n--------~~l~---~~a----~--~~~A~~wv~~~v~~~~p-~~~I~~I~VGNEvl~~ 115 (438)
|.+-+|++ +.+++|+...|- ..+. .+. . ..+=.+.+.+-|+.|-. +..|-+|++.||+...
T Consensus 157 p~ik~a~~~~~~lki~aSpWSpP~WMKtn~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~ 236 (496)
T PF02055_consen 157 PLIKEALAINPNLKIFASPWSPPAWMKTNGSMNGGGSLKGSLGDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNG 236 (496)
T ss_dssp HHHHHHHHHHTT-EEEEEES---GGGBTTSSSCSS-BBSCGTTSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGG
T ss_pred HHHHHHHHhCCCcEEEEecCCCCHHHccCCcCcCCCccCCCCCchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCC
Confidence 44445555 566999999982 2211 121 1 12223455666666532 4789999999999852
Q ss_pred ------CC--cchHHhHHHHHHH-HHHHHHHcCC-Cceeeec
Q 038452 116 ------AN--KDWIYNLVPAMKS-INNALIEAGI-KDIKIST 147 (438)
Q Consensus 116 ------~~--~~~~~~Ll~am~n-v~~aL~~~gl-~~IkVsT 147 (438)
.+ .-+++++..-|++ +.-+|+++|+ .++||=.
T Consensus 237 ~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~ 278 (496)
T PF02055_consen 237 SDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILI 278 (496)
T ss_dssp GSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEE
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 11 2346777787876 9999999998 6788743
No 16
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=61.41 E-value=34 Score=36.71 Aligned_cols=75 Identities=20% Similarity=0.366 Sum_probs=42.8
Q ss_pred CCC-CCEEEeeccCCCCCCCC--CCC---CCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCC
Q 038452 243 YSD-VPIVVAETGWPSAGDPR--ESS---ATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSE 315 (438)
Q Consensus 243 ~~~-~~vvV~ETGWPS~G~~~--~~~---as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E 315 (438)
+++ .+|+|||.|+....... +.. -=++--+.+++.+.+.+. .|-+. .-+|.-++.|- .|..| .+
T Consensus 365 Y~~~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~~~Ai~--dGv~v-----~GY~~WSl~DnfEW~~G--y~ 435 (469)
T PRK13511 365 YPNYKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVISDAIS--DGANV-----KGYFIWSLMDVFSWSNG--YE 435 (469)
T ss_pred cCCCCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHH--cCCCE-----EEEeecccccccchhcC--cc
Confidence 445 57999999997543211 000 112223344444444443 34332 34677778874 45554 78
Q ss_pred cceecccCCCC
Q 038452 316 RNFGLFKQDFT 326 (438)
Q Consensus 316 ~~wGlf~~d~~ 326 (438)
+.|||++.|.+
T Consensus 436 ~RfGl~~VD~~ 446 (469)
T PRK13511 436 KRYGLFYVDFE 446 (469)
T ss_pred CccceEEECCC
Confidence 99999998764
No 17
>TIGR03356 BGL beta-galactosidase.
Probab=60.47 E-value=35 Score=36.18 Aligned_cols=75 Identities=17% Similarity=0.369 Sum_probs=41.9
Q ss_pred CCCCCEEEeeccCCCCCCCC-CC---CCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCcc
Q 038452 243 YSDVPIVVAETGWPSAGDPR-ES---SATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERN 317 (438)
Q Consensus 243 ~~~~~vvV~ETGWPS~G~~~-~~---~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~ 317 (438)
+++.+|+|+|.|+....... +. .-=++--+.+++.+.+.+. .|-|. .-++.-++.|- .|..| ..+.
T Consensus 335 Y~~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~--dGv~v-----~GY~~Wsl~Dn~ew~~g--y~~r 405 (427)
T TIGR03356 335 YPGPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIE--EGVDV-----RGYFVWSLLDNFEWAEG--YSKR 405 (427)
T ss_pred cCCCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHH--CCCCE-----EEEEecccccccchhcc--cccc
Confidence 45568999999997543211 00 0111222333344444443 34332 34677777774 45444 7899
Q ss_pred eecccCCCC
Q 038452 318 FGLFKQDFT 326 (438)
Q Consensus 318 wGlf~~d~~ 326 (438)
|||++.|..
T Consensus 406 fGl~~VD~~ 414 (427)
T TIGR03356 406 FGLVHVDYE 414 (427)
T ss_pred cceEEECCC
Confidence 999998765
No 18
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=53.61 E-value=31 Score=32.69 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhh-hhHHHHHHhcCCcccccCC-CCcccCCCcc
Q 038452 126 PAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDII-APMLEFLRETKSAFMINPY-PYFNYADSIS 203 (438)
Q Consensus 126 ~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~-~~~l~fL~~~~d~~~vNiy-Pff~~~~~~l 203 (438)
.+++.+.+.+...|+..|++.+...... | + .+.. .++++.+.+.+=|+.+++- +.+...
T Consensus 85 ~~~~~l~~~~~~~g~~Gv~l~~~~~~~~------~-------~--~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~---- 145 (273)
T PF04909_consen 85 DAVEELERALQELGFRGVKLHPDLGGFD------P-------D--DPRLDDPIFEAAEELGLPVLIHTGMTGFPDA---- 145 (273)
T ss_dssp HHHHHHHHHHHTTTESEEEEESSETTCC------T-------T--SGHCHHHHHHHHHHHT-EEEEEESHTHHHHH----
T ss_pred hHHHHHHHhccccceeeeEecCCCCccc------c-------c--cHHHHHHHHHHHHhhccceeeeccccchhhh----
Confidence 6788888888888986688776432111 1 1 1233 4889999999988887743 111100
Q ss_pred ccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCC
Q 038452 204 DYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWP 256 (438)
Q Consensus 204 d~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWP 256 (438)
..-..+...+...+++ ||+++|++.+.|+|
T Consensus 146 ---------------------~~~~~~~~~~~~~~~~--~P~l~ii~~H~G~~ 175 (273)
T PF04909_consen 146 ---------------------PSDPADPEELEELLER--FPDLRIILAHLGGP 175 (273)
T ss_dssp ---------------------HHHHHHHHHHTTHHHH--STTSEEEESGGGTT
T ss_pred ---------------------hHHHHHHHHHHHHHHH--hcCCeEEEecCccc
Confidence 0111122223334445 79999999999998
No 19
>PLN02998 beta-glucosidase
Probab=51.48 E-value=27 Score=37.89 Aligned_cols=75 Identities=23% Similarity=0.411 Sum_probs=43.3
Q ss_pred CCCCCEEEeeccCCCCCCC-CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCcceec
Q 038452 243 YSDVPIVVAETGWPSAGDP-RESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFGL 320 (438)
Q Consensus 243 ~~~~~vvV~ETGWPS~G~~-~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wGl 320 (438)
+++.+|+|+|-|+....+. -...-=++--+.+++.+.+.+. .|-+. .-+|.-++.|- .|..| .++.|||
T Consensus 390 Y~~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~--dGv~V-----~GY~~WSl~DnfEW~~G--y~~RfGL 460 (497)
T PLN02998 390 YGNPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLR--KGSDV-----KGYFQWSLMDVFELFGG--YERSFGL 460 (497)
T ss_pred cCCCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHH--cCCCE-----EEEeeccchhhhchhcc--ccCccce
Confidence 4555899999999865311 0001112333445555555553 34322 34666777773 45544 7899999
Q ss_pred ccCCCC
Q 038452 321 FKQDFT 326 (438)
Q Consensus 321 f~~d~~ 326 (438)
++.|..
T Consensus 461 v~VD~~ 466 (497)
T PLN02998 461 LYVDFK 466 (497)
T ss_pred EEECCC
Confidence 997754
No 20
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
Probab=50.41 E-value=62 Score=33.14 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=67.4
Q ss_pred HHHHHHhhCCCEEEEEecCCCccc-ccChHHHHHHHHhhccccC-----CCceEEEEEeccccccCC--CcchHHhHHHH
Q 038452 56 DILRAFANTNISVTVSVGNGDIPA-LVQLPAAKNWVAANIVPFY-----PSTKIIRVVVGNEIMQSA--NKDWIYNLVPA 127 (438)
Q Consensus 56 ~vL~A~~~tgi~v~vGv~n~~l~~-~a~~~~A~~wv~~~v~~~~-----p~~~I~~I~VGNEvl~~~--~~~~~~~Ll~a 127 (438)
.+.+=++.+|.+|+.|+---.-.. +......-.|=-+|...++ ..-+|.+-=.|||.-..+ ....+.++...
T Consensus 113 ~l~~F~~~tG~~liFgLNAL~g~~~~~~~~~~g~WnssNA~~Ll~Yt~skgy~I~~WELGNEl~g~g~~~~v~a~qyakD 192 (319)
T PF03662_consen 113 ELNNFAQKTGLKLIFGLNALLGRRQLADRDWDGSWNSSNAQSLLKYTASKGYNIDSWELGNELNGSGVGASVSAEQYAKD 192 (319)
T ss_dssp HHHHHHHHHT-EEEEEE-TTTS-HHHHHHHHHHHHHHH-TTTEEEEEESS-GGG--------HHHHSSSTT--HHHHHHH
T ss_pred HHHHHHHHhCCEEEEEecccCCCCCCCCCCcCCCCChHHHHHHHHHHHHcCCCccccccccccCCCCCCCccCHHHHHHH
Confidence 344555579999999985311110 0001233567666655442 123577778899965431 12457888888
Q ss_pred HHHHHHHHHHcCCCc----eeeecccccccccccCCCCCccccCCcchhhhhhHHHHHHh-cCCcccccCCCCcccCCCc
Q 038452 128 MKSINNALIEAGIKD----IKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRE-TKSAFMINPYPYFNYADSI 202 (438)
Q Consensus 128 m~nv~~aL~~~gl~~----IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~fL~~-~~d~~~vNiyPff~~~~~~ 202 (438)
...+|+.|+.. +.+ -+|.-|.. .|..+ .+++.|+-..+ ..|.+.-|+|+.=......
T Consensus 193 ~~~Lr~il~~i-y~~~~~~P~v~gP~~-------------~~d~~----w~~~FL~~~g~~~vD~vT~H~Y~lg~g~d~~ 254 (319)
T PF03662_consen 193 FIQLRKILNEI-YKNALPGPLVVGPGG-------------FFDAD----WLKEFLKASGPGVVDAVTWHHYNLGSGRDPA 254 (319)
T ss_dssp H---HHHHHHH-HHH-TT---EEEEEE-------------SS-GG----GHHHHHHHTTTT--SEEEEEEEEE--TT-TT
T ss_pred HHHHHHHHHHH-HhcCCCCCeEECCCC-------------CCCHH----HHHHHHHhcCCCccCEEEEEecCCCCCchHH
Confidence 88888888763 211 12332221 12222 23433333323 2567777777432221111
Q ss_pred cccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCCCCCCC
Q 038452 203 SDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDP 261 (438)
Q Consensus 203 ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWPS~G~~ 261 (438)
+-. .+.++. |-+-+..++..+...+++.+ ++++++|+|||=...|+.
T Consensus 255 l~~-------~~l~p~----~Ld~~~~~~~~~~~~v~~~~-p~~~~WlGEtg~Ay~gG~ 301 (319)
T PF03662_consen 255 LIE-------DFLNPS----YLDTLADTFQKLQQVVQEYG-PGKPVWLGETGSAYNGGA 301 (319)
T ss_dssp -HH-------HHTS------HHHHHHHHHHHHH-----HH-H---EEEEEEEEESTT--
T ss_pred HHH-------HhcChh----hhhHHHHHHHHHhhhhcccC-CCCCeEEeCcccccCCCC
Confidence 100 012221 21222233334444444433 679999999996555544
No 21
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=48.52 E-value=48 Score=36.13 Aligned_cols=75 Identities=17% Similarity=0.404 Sum_probs=50.0
Q ss_pred CCCCCCEEEeeccCCCCCCCC---C----CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCC
Q 038452 242 GYSDVPIVVAETGWPSAGDPR---E----SSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGAT 313 (438)
Q Consensus 242 g~~~~~vvV~ETGWPS~G~~~---~----~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~ 313 (438)
-+++.+|.|+|-|-+...+.. + ...=++..+.|++.+.+.+.. .|- ...-+|+.+|.|- .|..|
T Consensus 404 ~Y~np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~-dgv-----nv~GYf~WSLmDnfEw~~G-- 475 (524)
T KOG0626|consen 404 KYGNPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKE-DGV-----NVKGYFVWSLLDNFEWLDG-- 475 (524)
T ss_pred hcCCCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHh-cCC-----ceeeEEEeEcccchhhhcC--
Confidence 378999999999988875432 0 123345566777777776653 121 1235889999884 56665
Q ss_pred CCcceecccCC
Q 038452 314 SERNFGLFKQD 324 (438)
Q Consensus 314 ~E~~wGlf~~d 324 (438)
..-.||||+.|
T Consensus 476 y~~RFGlyyVD 486 (524)
T KOG0626|consen 476 YKVRFGLYYVD 486 (524)
T ss_pred cccccccEEEe
Confidence 66889999853
No 22
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.32 E-value=58 Score=33.97 Aligned_cols=60 Identities=18% Similarity=0.372 Sum_probs=38.9
Q ss_pred chhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCCCCCCCCC---CCCCHHHHHHHHHHHHHHHhcC
Q 038452 223 YSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRE---SSATVDNAASFNWNLIQKVNSG 285 (438)
Q Consensus 223 y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWPS~G~~~~---~~as~~na~~y~~~lv~~~~~~ 285 (438)
|.|-|++-+-..-......|++.++|+.+ |||.|.-.+ ...|-..++.-+.++++.+...
T Consensus 125 fNntf~dav~R~aqI~~d~g~~~~pVvFS---WPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 125 FNNTFEDAVYRTAQIVHDSGNDGVPVVFS---WPSRGSLLGYNYDRESTNYSRPALERLLRYLATD 187 (377)
T ss_pred cCCchhHHHHHHHHHHhhcCCCcceEEEE---cCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC
Confidence 55666654433333344567788888887 999997532 2356666677777778777653
No 23
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=47.13 E-value=79 Score=32.63 Aligned_cols=85 Identities=9% Similarity=0.108 Sum_probs=49.6
Q ss_pred chHHHHHHhhCCCEEEEEecCCCcccccChHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHHHH
Q 038452 54 TIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINN 133 (438)
Q Consensus 54 ~~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~ 133 (438)
++.++..++..|++|++..-.. .+.+.++..-++++++-| .+...-...+|-+==|-....+......++.-|+++|+
T Consensus 66 ~~~~~~~A~~~~v~v~~~~~~~-~~~l~~~~~R~~fi~siv-~~~~~~gfDGIdIDwE~p~~~~~~d~~~~t~llkelr~ 143 (358)
T cd02875 66 DDELLCYAHSKGVRLVLKGDVP-LEQISNPTYRTQWIQQKV-ELAKSQFMDGINIDIEQPITKGSPEYYALTELVKETTK 143 (358)
T ss_pred CHHHHHHHHHcCCEEEEECccC-HHHcCCHHHHHHHHHHHH-HHHHHhCCCeEEEcccCCCCCCcchHHHHHHHHHHHHH
Confidence 7899999999999999864221 223333333334444433 22222234555554443322112234678889999999
Q ss_pred HHHHcCC
Q 038452 134 ALIEAGI 140 (438)
Q Consensus 134 aL~~~gl 140 (438)
+|.+.+.
T Consensus 144 ~l~~~~~ 150 (358)
T cd02875 144 AFKKENP 150 (358)
T ss_pred HHhhcCC
Confidence 9998764
No 24
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=46.28 E-value=1.8e+02 Score=30.69 Aligned_cols=100 Identities=13% Similarity=0.091 Sum_probs=51.4
Q ss_pred hHHHHHHhhCCCEEEEEecCCCc----------------ccccC--hHHHHHHHHhhccccC-CCceEEEEEeccccccC
Q 038452 55 IDILRAFANTNISVTVSVGNGDI----------------PALVQ--LPAAKNWVAANIVPFY-PSTKIIRVVVGNEIMQS 115 (438)
Q Consensus 55 ~~vL~A~~~tgi~v~vGv~n~~l----------------~~~a~--~~~A~~wv~~~v~~~~-p~~~I~~I~VGNEvl~~ 115 (438)
..+|+++++.|++.+++..|+-. ..+.. ..+=...+.+-+.-|- -..+|++|.-=||+-..
T Consensus 107 rwfL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~ 186 (384)
T PF14587_consen 107 RWFLKAAKERGVNIFEAFSNSPPWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWN 186 (384)
T ss_dssp HHHHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-
T ss_pred HHHHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCC
Confidence 46889999999999999877421 11221 1111223332222220 14789999999999876
Q ss_pred CC-------cchHHhHHHHHHHHHHHHHHcCC-Cceeeecccccccc
Q 038452 116 AN-------KDWIYNLVPAMKSINNALIEAGI-KDIKISTPNTLGFL 154 (438)
Q Consensus 116 ~~-------~~~~~~Ll~am~nv~~aL~~~gl-~~IkVsT~~~~~vl 154 (438)
+. ..+..+....|+.|+++|++.|| ..|-+.-+-.+..+
T Consensus 187 W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l 233 (384)
T PF14587_consen 187 WAGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEAGDWEYL 233 (384)
T ss_dssp GG--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGG
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecchhhHHHH
Confidence 31 13567788899999999999999 44444433334433
No 25
>PLN02814 beta-glucosidase
Probab=46.18 E-value=70 Score=34.80 Aligned_cols=75 Identities=17% Similarity=0.447 Sum_probs=43.1
Q ss_pred CCCCCEEEeeccCCCCCCCC-CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCcceec
Q 038452 243 YSDVPIVVAETGWPSAGDPR-ESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFGL 320 (438)
Q Consensus 243 ~~~~~vvV~ETGWPS~G~~~-~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wGl 320 (438)
+++.+|+|+|-|+....+.. ...-=++--+.+++.+.+.+. .|-|. .-+|.-++.|- .|..| .++.|||
T Consensus 385 Y~~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~--dGv~V-----~GY~~WSllDnfEW~~G--y~~RfGL 455 (504)
T PLN02814 385 YNNPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIK--NGSDT-----RGYFVWSMIDLYELLGG--YTTSFGM 455 (504)
T ss_pred cCCCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHH--cCCCE-----EEEeeccchhhhchhcc--ccCccce
Confidence 55668999999997543110 001112233444444544443 34332 24677777773 45444 8999999
Q ss_pred ccCCCC
Q 038452 321 FKQDFT 326 (438)
Q Consensus 321 f~~d~~ 326 (438)
++.|..
T Consensus 456 vyVD~~ 461 (504)
T PLN02814 456 YYVNFS 461 (504)
T ss_pred EEECCC
Confidence 998764
No 26
>PLN02849 beta-glucosidase
Probab=45.05 E-value=77 Score=34.47 Aligned_cols=75 Identities=19% Similarity=0.432 Sum_probs=43.4
Q ss_pred CCCCCEEEeeccCCCCCCCCCC---CCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCcce
Q 038452 243 YSDVPIVVAETGWPSAGDPRES---SATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNF 318 (438)
Q Consensus 243 ~~~~~vvV~ETGWPS~G~~~~~---~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~w 318 (438)
+++.||+|+|-|++......+. .-=++--+.+++.+.+.+. .|-+. .-+|..++.|- .|..| .++.|
T Consensus 383 Y~~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~--dGv~V-----~GY~~WSl~DnfEW~~G--y~~Rf 453 (503)
T PLN02849 383 YGNPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVR--NGSDT-----RGYFVWSFMDLYELLKG--YEFSF 453 (503)
T ss_pred cCCCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHH--cCCCE-----EEEeeccchhhhchhcc--ccCcc
Confidence 5556899999999865421110 0112233444444544443 24322 34677777774 34444 78999
Q ss_pred ecccCCCC
Q 038452 319 GLFKQDFT 326 (438)
Q Consensus 319 Glf~~d~~ 326 (438)
||++.|..
T Consensus 454 GLi~VD~~ 461 (503)
T PLN02849 454 GLYSVNFS 461 (503)
T ss_pred ceEEECCC
Confidence 99998764
No 27
>cd06418 GH25_BacA-like BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. BacA is homologous to the YbfG and YkuG lysins of Bacillus subtilis. BacA has a C-terminal catalytic glycosyl hydrolase family 25 (GH25) domain and an N-terminal peptidoglycan-binding domain comprised of three alpha helices which is similar to a domain found in matrixins.
Probab=44.29 E-value=1.4e+02 Score=28.51 Aligned_cols=82 Identities=23% Similarity=0.297 Sum_probs=54.6
Q ss_pred hHHHHHHhhCCCEEEEEecCCC---cccc--cC-hHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHH
Q 038452 55 IDILRAFANTNISVTVSVGNGD---IPAL--VQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAM 128 (438)
Q Consensus 55 ~~vL~A~~~tgi~v~vGv~n~~---l~~~--a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am 128 (438)
+.=++.+...|++|+. |++.. .... +. ...|.+-++.+..--.|...+.++.|=..... ......++|++
T Consensus 55 ~~e~~~i~~~Gl~~~p-Iyq~~~~~~~~~~~~~G~~dA~~A~~~A~~lG~p~gs~IYfavD~d~~~---~~~~~~v~~Y~ 130 (212)
T cd06418 55 ATELETITAAGLKVFP-IYQGGGYSLDYFGYEQGVKDARDAVAAARALGFPPGTIIYFAVDFDALD---DEVTEVILPYF 130 (212)
T ss_pred HHHHHHHHHCCCEEEE-EEECCCccccccCHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeecCCCc---chhHHHHHHHH
Confidence 4445677788999865 55533 2222 22 45566656666554567777888888544432 23457899999
Q ss_pred HHHHHHHHHcCC
Q 038452 129 KSINNALIEAGI 140 (438)
Q Consensus 129 ~nv~~aL~~~gl 140 (438)
+-+.++|...||
T Consensus 131 ~a~~~~l~~~gY 142 (212)
T cd06418 131 RGWNDALHEAGY 142 (212)
T ss_pred HHHHHHHHhcCC
Confidence 999999999887
No 28
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=38.85 E-value=49 Score=33.08 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=49.6
Q ss_pred chHHHHHHhhCCCEEEEEecCCC--------cccccC-hHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhH
Q 038452 54 TIDILRAFANTNISVTVSVGNGD--------IPALVQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNL 124 (438)
Q Consensus 54 ~~~vL~A~~~tgi~v~vGv~n~~--------l~~~a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~L 124 (438)
++.++.+++..+++|++.|.+.. ...+.+ +..-.+ +.++|..+...-.+.+|-+-=|.+.. ......
T Consensus 47 ~~~~~~~a~~~~~kv~~~i~~~~~~~~~~~~~~~~l~~~~~r~~-fi~~iv~~l~~~~~DGidiDwE~~~~---~d~~~~ 122 (313)
T cd02874 47 DERLIEAAKRRGVKPLLVITNLTNGNFDSELAHAVLSNPEARQR-LINNILALAKKYGYDGVNIDFENVPP---EDREAY 122 (313)
T ss_pred CHHHHHHHHHCCCeEEEEEecCCCCCCCHHHHHHHhcCHHHHHH-HHHHHHHHHHHhCCCcEEEecccCCH---HHHHHH
Confidence 56888888888999999997643 122222 222222 23333333222234556555565432 345668
Q ss_pred HHHHHHHHHHHHHcCC
Q 038452 125 VPAMKSINNALIEAGI 140 (438)
Q Consensus 125 l~am~nv~~aL~~~gl 140 (438)
+.-|+.+|++|.+.|+
T Consensus 123 ~~fl~~lr~~l~~~~~ 138 (313)
T cd02874 123 TQFLRELSDRLHPAGY 138 (313)
T ss_pred HHHHHHHHHHhhhcCc
Confidence 8899999999987764
No 29
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=36.92 E-value=96 Score=29.90 Aligned_cols=44 Identities=18% Similarity=0.374 Sum_probs=27.5
Q ss_pred HHHcCCCCCCEEEeeccCCCCCCCCC---CCCCHHHHHHHHHHHHHHHhc
Q 038452 238 MRALGYSDVPIVVAETGWPSAGDPRE---SSATVDNAASFNWNLIQKVNS 284 (438)
Q Consensus 238 ~~k~g~~~~~vvV~ETGWPS~G~~~~---~~as~~na~~y~~~lv~~~~~ 284 (438)
...+++++..|+. .|||.|...+ ...+...++..+.+++..+..
T Consensus 42 ~~~~~~~~~~i~F---sWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 42 AHDLGFPGVVILF---SWPSDGSLLGYFYDRESARFSGPALARFLRDLAR 88 (233)
T ss_pred HHHhCCCceEEEE---EcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh
Confidence 3456777766655 4999997542 234555556666677776654
No 30
>PRK09936 hypothetical protein; Provisional
Probab=34.77 E-value=93 Score=31.48 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=37.0
Q ss_pred cceEEeccCCCC-CCCHHHHHHHHHh---cC----------------------chHHHHHHhhCCCEEEEEecCC
Q 038452 27 AIGVNYGTIANN-LPKPAEVANFLKT---KT----------------------TIDILRAFANTNISVTVSVGNG 75 (438)
Q Consensus 27 ~~Gvnyg~~~~n-lpsp~~vv~ll~s---~~----------------------~~~vL~A~~~tgi~v~vGv~n~ 75 (438)
.-|+=|-+...+ -.++++=-++++. .+ -.+.|+++.+.||+|.||++-|
T Consensus 21 ~~g~F~Qp~n~d~~~~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~~~g~La~~l~~A~~~Gl~v~vGL~~D 95 (296)
T PRK09936 21 MKGIFYQPQNRDSQVTDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGGQRGWLAKRLAAAQQAGLKLVVGLYAD 95 (296)
T ss_pred cccceeccccccCCCCHHHHHHHHHHHHHcCCcEEEEEeeeccCCCcccchHHHHHHHHHHHHcCCEEEEcccCC
Confidence 457789998877 4677765555543 33 3578899999999999999976
No 31
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=34.52 E-value=4.6e+02 Score=28.16 Aligned_cols=183 Identities=16% Similarity=0.225 Sum_probs=84.1
Q ss_pred EEEeccccccCC--CcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhhhhHHHHHH
Q 038452 105 RVVVGNEIMQSA--NKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLR 182 (438)
Q Consensus 105 ~I~VGNEvl~~~--~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~fL~ 182 (438)
..=|=||+=... ...+..+-....+.+.++|++.. ..+||+-+-. .+. . ...+...++|+.
T Consensus 158 ~fEiWNEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~-p~~~vGGp~~--~~~-------------~-~~~~~~~l~~~~ 220 (486)
T PF01229_consen 158 YFEIWNEPDLKDFWWDGTPEEYFELYDATARAIKAVD-PELKVGGPAF--AWA-------------Y-DEWCEDFLEFCK 220 (486)
T ss_dssp EEEESS-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH--TTSEEEEEEE--ETT---------------THHHHHHHHHHH
T ss_pred eEEeCcCCCcccccCCCCHHHHHHHHHHHHHHHHHhC-CCCcccCccc--ccc-------------H-HHHHHHHHHHHh
Confidence 355788864331 12344556677777788888765 4578887610 000 0 024566777776
Q ss_pred hc---CCcccccCCCCcccCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeeccCCCCC
Q 038452 183 ET---KSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAG 259 (438)
Q Consensus 183 ~~---~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETGWPS~G 259 (438)
+. -|++..|.||+-......... ...+. ....+++. +.-+...+...+.+++++.++| |.+.-
T Consensus 221 ~~~~~~DfiS~H~y~~~~~~~~~~~~------~~~~~-----~~~~~~~~-~~~~~~~~~~e~~p~~~~~~tE--~n~~~ 286 (486)
T PF01229_consen 221 GNNCPLDFISFHSYGTDSAEDINENM------YERIE-----DSRRLFPE-LKETRPIINDEADPNLPLYITE--WNASI 286 (486)
T ss_dssp HCT---SEEEEEEE-BESESE-SS-E------EEEB-------HHHHHHH-HHHHHHHHHTSSSTT--EEEEE--EES-S
T ss_pred cCCCCCCEEEEEecccccccccchhH------Hhhhh-----hHHHHHHH-HHHHHHHHhhccCCCCceeecc--ccccc
Confidence 53 466677777753211000000 00000 01112222 2223234455678899999999 77754
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEE----ccCCCCCCCCCCCcceecccCCCCee
Q 038452 260 DPRES-SATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFA----LFNENKKPGATSERNFGLFKQDFTPV 328 (438)
Q Consensus 260 ~~~~~-~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~----lfDE~~K~g~~~E~~wGlf~~d~~~k 328 (438)
..... .-|.-+|+-..++++..... .++.|-+- .|.|+--+...+-.-|||++.+|-+|
T Consensus 287 ~~~~~~~dt~~~aA~i~k~lL~~~~~----------~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~gI~K 350 (486)
T PF01229_consen 287 SPRNPQHDTCFKAAYIAKNLLSNDGA----------FLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKLGIPK 350 (486)
T ss_dssp STT-GGGGSHHHHHHHHH-HHHHGGG----------T-SEEEES-SBS---TTSS-SSSSSS-S-SEECCCEE-
T ss_pred CCCcchhccccchhhHHHHHHHhhhh----------hhhhhhccchhhhhhccCCCCCceecchhhhhccCCCc
Confidence 43211 34556666666667666532 23333221 23333222224566699999998655
No 32
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=33.30 E-value=1.6e+02 Score=30.07 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=38.0
Q ss_pred hCCCEEEEEecC--CC---cccccC-hHHHHHHHHhhccccCCCceEEEEEeccccccC--CCcchHHhHHHHHHHHHHH
Q 038452 63 NTNISVTVSVGN--GD---IPALVQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQS--ANKDWIYNLVPAMKSINNA 134 (438)
Q Consensus 63 ~tgi~v~vGv~n--~~---l~~~a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~--~~~~~~~~Ll~am~nv~~a 134 (438)
+.+++|++.|-. .. ...+++ +...++.+++ |..++..-.+.+|-+==|-... ........++..|+.+|++
T Consensus 68 ~p~lkvlisiGG~~~~~~~f~~~~~~~~~r~~fi~~-iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~ 146 (362)
T cd02872 68 NPNLKTLLAIGGWNFGSAKFSAMAASPENRKTFIKS-AIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREA 146 (362)
T ss_pred CCCceEEEEEcCCCCCcchhHHHhCCHHHHHHHHHH-HHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHH
Confidence 368999988842 21 223333 3322333322 2222211234444443332221 1123456788999999999
Q ss_pred HHHc
Q 038452 135 LIEA 138 (438)
Q Consensus 135 L~~~ 138 (438)
|.+.
T Consensus 147 l~~~ 150 (362)
T cd02872 147 FEPE 150 (362)
T ss_pred HHhh
Confidence 9987
No 33
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=31.30 E-value=1.7e+02 Score=31.53 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=30.9
Q ss_pred CccceEEeccCCCCC--CCHHHHHHHHHhcCchHHHHHHhhCCCEEEEEecCCCcc
Q 038452 25 TSAIGVNYGTIANNL--PKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIP 78 (438)
Q Consensus 25 ~~~~Gvnyg~~~~nl--psp~~vv~ll~s~~~~~vL~A~~~tgi~v~vGv~n~~l~ 78 (438)
+--++|.|.|+-.+- .--++-++.++ +++.+|.+.||+-+|.+.--+++
T Consensus 69 ~yRfSIsWsRI~P~g~~~~N~~gl~~Y~-----~lid~l~~~GI~P~VTL~H~dlP 119 (467)
T TIGR01233 69 GIRISIAWSRIFPTGYGEVNEKGVEFYH-----KLFAECHKRHVEPFVTLHHFDTP 119 (467)
T ss_pred EEEEecchhhccCCCCCCcCHHHHHHHH-----HHHHHHHHcCCEEEEeccCCCCc
Confidence 334566666653321 11233445554 48899999999999999866655
No 34
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=30.28 E-value=6.1e+02 Score=25.91 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCCCCccccCCcchhhhhhHHHHHHhcCCcccccCCCCcccCCCcccc-ccccCCCc-------cccCCCcccchhhHHH
Q 038452 158 EPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDY-ILFKPNKG-------VYDPNTRITYSNMFDA 229 (438)
Q Consensus 158 ~pPS~g~F~~~~~~~~~~~~l~fL~~~~d~~~vNiyPff~~~~~~ld~-A~f~~~~~-------v~d~~~~~~y~n~fda 229 (438)
+|...+.+.++.. +.++.+++.+.+.+..+.+-+.-.-......... ....++.. ....-|.-.-..+.+.
T Consensus 64 ~~~~~~l~~d~~i-~~~~~l~~~vh~~g~~~~~Ql~H~G~~~~~~~~~~~~~~ps~~~~~~~~~~~~~mt~~eI~~ii~~ 142 (343)
T cd04734 64 AFGNLNASDDEII-PGFRRLAEAVHAHGAVIMIQLTHLGRRGDGDGSWLPPLAPSAVPEPRHRAVPKAMEEEDIEEIIAA 142 (343)
T ss_pred CCCccccCCHHHH-HHHHHHHHHHHhcCCeEEEeccCCCcCcCcccCCCcccCCCCCCCCCCCCCCCcCCHHHHHHHHHH
Confidence 4445566665544 6889999999999999888765321100000000 00000000 0000000011234455
Q ss_pred HHHHHHHHHHHcCCCCCCEEEeeccC-------CCC-CCCCCCCCCHHHHHHHHHHHHHHHhcCCCC
Q 038452 230 QMDAVYSAMRALGYSDVPIVVAETGW-------PSA-GDPRESSATVDNAASFNWNLIQKVNSGKGT 288 (438)
Q Consensus 230 ~~Dav~~a~~k~g~~~~~vvV~ETGW-------PS~-G~~~~~~as~~na~~y~~~lv~~~~~~~GT 288 (438)
..+|...| .++||.+++|.-+. |+ |.- -...+.+.|++|-.+|...+++.+++..|.
T Consensus 143 f~~AA~ra-~~aGfDgVeih~ah-GyLl~qFlsp~~N~RtD~yGGslenR~r~~~eiv~~ir~~vg~ 207 (343)
T cd04734 143 FADAARRC-QAGGLDGVELQAAH-GHLIDQFLSPLTNRRTDEYGGSLENRMRFLLEVLAAVRAAVGP 207 (343)
T ss_pred HHHHHHHH-HHcCCCEEEEcccc-chHHHHhhCCCcCCCCCcCCCCHHHHhHHHHHHHHHHHHHcCC
Confidence 55555544 45899999999876 64 421 222345789999999999999999986553
No 35
>PHA02754 hypothetical protein; Provisional
Probab=29.87 E-value=43 Score=25.72 Aligned_cols=26 Identities=38% Similarity=0.549 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHHHHcCC--Cceeeecc
Q 038452 123 NLVPAMKSINNALIEAGI--KDIKISTP 148 (438)
Q Consensus 123 ~Ll~am~nv~~aL~~~gl--~~IkVsT~ 148 (438)
..-.+|+++|..|..+|+ ++|++-|.
T Consensus 15 ~Fke~MRelkD~LSe~GiYi~RIkai~~ 42 (67)
T PHA02754 15 DFKEAMRELKDILSEAGIYIDRIKAITT 42 (67)
T ss_pred HHHHHHHHHHHHHhhCceEEEEEEEEEe
Confidence 456799999999999996 78876554
No 36
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=29.21 E-value=1.1e+02 Score=28.21 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=42.8
Q ss_pred HHHHhh--CCCEEEEEecCCCccc---ccC-hHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHH
Q 038452 58 LRAFAN--TNISVTVSVGNGDIPA---LVQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSI 131 (438)
Q Consensus 58 L~A~~~--tgi~v~vGv~n~~l~~---~a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv 131 (438)
++.++. .|++|++.|....... +++ +...++. .+++..+.....+.+|-+==|-....+......++..|+.+
T Consensus 55 i~~l~~~~~g~kv~~sigg~~~~~~~~~~~~~~~~~~f-~~~~~~~v~~~~~DGidiD~E~~~~~~~~~~~~~~~ll~~l 133 (210)
T cd00598 55 LEELASKKPGLKVLISIGGWTDSSPFTLASDPASRAAF-ANSLVSFLKTYGFDGVDIDWEYPGAADNSDRENFITLLREL 133 (210)
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCchhhcCHHHHHHH-HHHHHHHHHHcCCCceEEeeeCCCCcCccHHHHHHHHHHHH
Confidence 344444 4999999997643222 233 3322222 22222222222345555433433221111357789999999
Q ss_pred HHHHHHcCC
Q 038452 132 NNALIEAGI 140 (438)
Q Consensus 132 ~~aL~~~gl 140 (438)
|++|.+.++
T Consensus 134 r~~l~~~~~ 142 (210)
T cd00598 134 RSALGAANY 142 (210)
T ss_pred HHHhcccCc
Confidence 999977653
No 37
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=28.51 E-value=1.3e+02 Score=32.43 Aligned_cols=74 Identities=15% Similarity=0.307 Sum_probs=41.3
Q ss_pred CCEEEeeccCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCccee
Q 038452 246 VPIVVAETGWPSAGDPRESSA-----TVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFG 319 (438)
Q Consensus 246 ~~vvV~ETGWPS~G~~~~~~a-----s~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wG 319 (438)
+||+|+|-|..........+. =++--+.+++.+.+.+.+ .|-|. .-+|.-++.|- .|..| ...+.||
T Consensus 368 ~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~-dGv~V-----~GY~~WSl~Dn~Ew~~G-~y~~RfG 440 (476)
T PRK09589 368 LPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKAVVE-DGVDL-----MGYTPWGCIDLVSAGTG-EMKKRYG 440 (476)
T ss_pred CCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHHHHh-cCCCe-----EEEeeccccccccccCC-cccccee
Confidence 579999999975432111111 122233444445444411 34332 34677788874 45443 3678999
Q ss_pred cccCCCC
Q 038452 320 LFKQDFT 326 (438)
Q Consensus 320 lf~~d~~ 326 (438)
|++.|..
T Consensus 441 lv~VD~~ 447 (476)
T PRK09589 441 FIYVDKD 447 (476)
T ss_pred eEEEcCC
Confidence 9987765
No 38
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=28.03 E-value=36 Score=28.60 Aligned_cols=23 Identities=30% Similarity=0.179 Sum_probs=11.6
Q ss_pred CccccchhhHHHHHHHHHhhhcc
Q 038452 1 MWSTRSSGLVVLQASLLILRFAA 23 (438)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (438)
|=+..++.+.+||++||++++.+
T Consensus 1 MaSK~~llL~l~LA~lLlisSev 23 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEV 23 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhh
Confidence 33444455555555555555443
No 39
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=27.66 E-value=1.2e+02 Score=22.91 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=22.3
Q ss_pred CHHHHHHHHHhcC--------------chHHHHHHhhCCCEEEEEec
Q 038452 41 KPAEVANFLKTKT--------------TIDILRAFANTNISVTVSVG 73 (438)
Q Consensus 41 sp~~vv~ll~s~~--------------~~~vL~A~~~tgi~v~vGv~ 73 (438)
++++.++..+.++ .+...+.++..||+++.|+.
T Consensus 16 ~~~~~~~~a~~~g~~~v~iTDh~~~~~~~~~~~~~~~~gi~~i~G~E 62 (67)
T smart00481 16 SPEELVKRAKELGLKAIAITDHGNLFGAVEFYKAAKKAGIKPIIGLE 62 (67)
T ss_pred CHHHHHHHHHHcCCCEEEEeeCCcccCHHHHHHHHHHcCCeEEEEEE
Confidence 5777777777665 23455666677888887774
No 40
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=27.61 E-value=3.8e+02 Score=25.09 Aligned_cols=56 Identities=14% Similarity=0.279 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEee-ccCCCCCCCC-CCCCCHHHHHHHHHHHHHHHhc
Q 038452 227 FDAQMDAVYSAMRALGYSDVPIVVAE-TGWPSAGDPR-ESSATVDNAASFNWNLIQKVNS 284 (438)
Q Consensus 227 fda~~Dav~~a~~k~g~~~~~vvV~E-TGWPS~G~~~-~~~as~~na~~y~~~lv~~~~~ 284 (438)
|...++.++..+ +.++|++||++.| .++|.. ... ....+.+..+...+..+..+++
T Consensus 76 ~~~~~~~fv~~i-R~~hP~tPIllv~~~~~~~~-~~~~~~~~~~~~~~~~~r~~v~~l~~ 133 (178)
T PF14606_consen 76 FRERLDGFVKTI-REAHPDTPILLVSPIPYPAG-YFDNSRGETVEEFREALREAVEQLRK 133 (178)
T ss_dssp HHHHHHHHHHHH-HTT-SSS-EEEEE----TTT-TS--TTS--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHhCCCCCEEEEecCCcccc-ccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444 3468999999999 455554 332 3357778888888888888764
No 41
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=26.94 E-value=59 Score=29.91 Aligned_cols=21 Identities=24% Similarity=0.058 Sum_probs=18.7
Q ss_pred hHHHHHHhhCCCEEEEEecCC
Q 038452 55 IDILRAFANTNISVTVSVGNG 75 (438)
Q Consensus 55 ~~vL~A~~~tgi~v~vGv~n~ 75 (438)
..+|+++.+.||+|+||++.+
T Consensus 68 ~~~L~~A~~~Gmkv~~Gl~~~ 88 (166)
T PF14488_consen 68 EMILDAADKYGMKVFVGLYFD 88 (166)
T ss_pred HHHHHHHHHcCCEEEEeCCCC
Confidence 468899999999999999864
No 42
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=26.45 E-value=1.3e+02 Score=29.07 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=42.8
Q ss_pred HHHHHhhCCCEEEEEecCCCcc---cccC-hHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHHH
Q 038452 57 ILRAFANTNISVTVSVGNGDIP---ALVQ-LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSIN 132 (438)
Q Consensus 57 vL~A~~~tgi~v~vGv~n~~l~---~~a~-~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~ 132 (438)
.+++++..|++|++.|.+.... .+.+ +...++++++ |..++....+.+|-+==|-... .....+.-|+++|
T Consensus 51 ~~~~~~~~~~kvl~sigg~~~~~~~~~~~~~~~r~~fi~~-lv~~~~~~~~DGIdiDwE~~~~----~~~~~~~fv~~Lr 125 (253)
T cd06545 51 VVNAAHAHNVKILISLAGGSPPEFTAALNDPAKRKALVDK-IINYVVSYNLDGIDVDLEGPDV----TFGDYLVFIRALY 125 (253)
T ss_pred HHHHHHhCCCEEEEEEcCCCCCcchhhhcCHHHHHHHHHH-HHHHHHHhCCCceeEEeeccCc----cHhHHHHHHHHHH
Confidence 4566677899999988764322 2222 3333333332 2222211224444443343321 1345777899999
Q ss_pred HHHHHcCC
Q 038452 133 NALIEAGI 140 (438)
Q Consensus 133 ~aL~~~gl 140 (438)
++|.+.|+
T Consensus 126 ~~l~~~~~ 133 (253)
T cd06545 126 AALKKEGK 133 (253)
T ss_pred HHHhhcCc
Confidence 99987764
No 43
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=25.89 E-value=3e+02 Score=28.85 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=69.7
Q ss_pred hHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccc--cCCcchhhhhhHHHHHHhcCCcccccCCCCcc
Q 038452 120 WIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKF--REGYDKDIIAPMLEFLRETKSAFMINPYPYFN 197 (438)
Q Consensus 120 ~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F--~~~~~~~~~~~~l~fL~~~~d~~~vNiyPff~ 197 (438)
+..++...+++.|+ . +||+.+-..-.-+...+ +.| .++.- |-++.+++.|.+.+=-++++++|+..
T Consensus 41 ~~~~v~~~i~~~~~----~---~iP~d~~~iD~~~~~~~----~~f~~d~~~F-Pd~~~~~~~l~~~G~~~~~~~~P~v~ 108 (441)
T PF01055_consen 41 NQDEVREVIDRYRS----N---GIPLDVIWIDDDYQDGY----GDFTWDPERF-PDPKQMIDELHDQGIKVVLWVHPFVS 108 (441)
T ss_dssp SHHHHHHHHHHHHH----T---T--EEEEEE-GGGSBTT----BTT-B-TTTT-TTHHHHHHHHHHTT-EEEEEEESEEE
T ss_pred CHHHHHHHHHHHHH----c---CCCccceeccccccccc----cccccccccc-cchHHHHHhHhhCCcEEEEEeecccC
Confidence 34556666665555 3 46666654322232211 222 22111 45788999999999999999999887
Q ss_pred cCCCccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCC----CCCCEEEeeccCCCCCCCCCCCCCHHHHHH
Q 038452 198 YADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGY----SDVPIVVAETGWPSAGDPRESSATVDNAAS 273 (438)
Q Consensus 198 ~~~~~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~----~~~~vvV~ETGWPS~G~~~~~~as~~na~~ 273 (438)
.... +|. .|+. +.+.|+ ++-...+++. ||-.+.- ..-+-.+++.
T Consensus 109 ~~~~--~~~-------------------~~~~--------~~~~~~~v~~~~g~~~~~~~-w~g~~~~--~Dftnp~a~~ 156 (441)
T PF01055_consen 109 NDSP--DYE-------------------NYDE--------AKEKGYLVKNPDGSPYIGRV-WPGKGGF--IDFTNPEARD 156 (441)
T ss_dssp TTTT--B-H-------------------HHHH--------HHHTT-BEBCTTSSB-EEEE-TTEEEEE--B-TTSHHHHH
T ss_pred CCCC--cch-------------------hhhh--------HhhcCceeecccCCcccccc-cCCcccc--cCCCChhHHH
Confidence 5321 111 1221 122232 2335677777 8843211 1234455888
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcccEEEEEccC
Q 038452 274 FNWNLIQKVNSGKGTPLMPNKQFETYIFALFN 305 (438)
Q Consensus 274 y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfD 305 (438)
++++.++.+.+. .+++.++..+=+
T Consensus 157 w~~~~~~~~~~~--------~Gvdg~w~D~~E 180 (441)
T PF01055_consen 157 WWKEQLKELLDD--------YGVDGWWLDFGE 180 (441)
T ss_dssp HHHHHHHHHHTT--------ST-SEEEEESTT
T ss_pred HHHHHHHHHHhc--------cCCceEEeecCC
Confidence 887777777652 268888887633
No 44
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=24.60 E-value=3e+02 Score=27.56 Aligned_cols=150 Identities=19% Similarity=0.198 Sum_probs=78.2
Q ss_pred HHHHhhCCCEEEEEecCCCcccccC--hHHHHHHHHhhccccCCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHH
Q 038452 58 LRAFANTNISVTVSVGNGDIPALVQ--LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNAL 135 (438)
Q Consensus 58 L~A~~~tgi~v~vGv~n~~l~~~a~--~~~A~~wv~~~v~~~~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL 135 (438)
++.+...++.+++=-.......+.+ ...+.+|+.+.+..| |+ +.+..++....+ . -.+.++++.+.
T Consensus 55 ~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~nd~~a~~~~~~-pd---rf~~~~~v~p~~-----~---~~a~~E~er~v 122 (293)
T COG2159 55 LAFMDAAGIDLFVLSGMGEVAIIPDLRRALANDDLAALAAEY-PD---RFVGFARVDPRD-----P---EAAAEELERRV 122 (293)
T ss_pred HhhhcccccceEEeeccccccchHHHhhhhhhHHHHHHHhhC-Cc---ceeeeeeeCCCc-----h---HHHHHHHHHHH
Confidence 5555667776655332111111111 111245666666554 44 222223333222 1 24667778888
Q ss_pred HHcCCCceeeecccccccccccCCCCCccccCCcchhhhhhHHHHHHhcCCcccccCCCCcccCCCccccccccCCCccc
Q 038452 136 IEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVY 215 (438)
Q Consensus 136 ~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~l~fL~~~~d~~~vNiyPff~~~~~~ld~A~f~~~~~v~ 215 (438)
++.|...+++...... +.|+ ++.+.|+.++..+.+-|+.++.=+...... ++... .
T Consensus 123 ~~~gf~g~~l~p~~~~------~~~~---------~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~--~~~~~-------~ 178 (293)
T COG2159 123 RELGFVGVKLHPVAQG------FYPD---------DPRLYPIYEAAEELGVPVVIHTGAGPGGAG--LEKGH-------S 178 (293)
T ss_pred HhcCceEEEecccccC------CCCC---------ChHHHHHHHHHHHcCCCEEEEeCCCCCCcc--cccCC-------C
Confidence 8877755776443211 1121 145788999999999999995544333210 00000 0
Q ss_pred cCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeecc--CCCCC
Q 038452 216 DPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETG--WPSAG 259 (438)
Q Consensus 216 d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ETG--WPS~G 259 (438)
++ ..+|-| ..+ ||+++||+++-| +|..-
T Consensus 179 ~p-----------~~~~~v---a~~--fP~l~IVl~H~G~~~p~~~ 208 (293)
T COG2159 179 DP-----------LYLDDV---ARK--FPELKIVLGHMGEDYPWEL 208 (293)
T ss_pred Cc-----------hHHHHH---HHH--CCCCcEEEEecCCCCchhH
Confidence 00 122322 233 899999999999 88754
No 45
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=23.84 E-value=2.2e+02 Score=30.73 Aligned_cols=74 Identities=18% Similarity=0.328 Sum_probs=42.1
Q ss_pred CCEEEeeccCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCccee
Q 038452 246 VPIVVAETGWPSAGDPRESS-----ATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFG 319 (438)
Q Consensus 246 ~~vvV~ETGWPS~G~~~~~~-----as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wG 319 (438)
+||+|+|-|..........+ -=++--+.+++.+.+.+. ..|-+. .-+|.-++.|- .|..| +.++.||
T Consensus 369 ~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~-~dGv~v-----~GY~~WSl~Dn~EW~~G-~y~~RfG 441 (478)
T PRK09593 369 KPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAIN-EDGVEL-----LGYTTWGCIDLVSAGTG-EMKKRYG 441 (478)
T ss_pred CCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHH-HcCCCE-----EEEeeccchHhhcccCC-CccCeec
Confidence 58999999998654221111 112333444455554442 124322 24666777774 45544 3789999
Q ss_pred cccCCCC
Q 038452 320 LFKQDFT 326 (438)
Q Consensus 320 lf~~d~~ 326 (438)
|++.|..
T Consensus 442 l~~VD~~ 448 (478)
T PRK09593 442 FIYVDRD 448 (478)
T ss_pred eEEECCC
Confidence 9987755
No 46
>PF15240 Pro-rich: Proline-rich
Probab=23.82 E-value=52 Score=30.88 Aligned_cols=24 Identities=33% Similarity=0.328 Sum_probs=14.1
Q ss_pred hhHHHHHHHHHhhhcccCccceEEe
Q 038452 8 GLVVLQASLLILRFAATTSAIGVNY 32 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~Gvny 32 (438)
++|+|-|+||+|++ |....=.|+|
T Consensus 2 LlVLLSvALLALSS-AQ~~dEdv~~ 25 (179)
T PF15240_consen 2 LLVLLSVALLALSS-AQSTDEDVSQ 25 (179)
T ss_pred hhHHHHHHHHHhhh-cccccccccc
Confidence 45666688788766 4433344444
No 47
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=23.56 E-value=1.9e+02 Score=31.24 Aligned_cols=73 Identities=12% Similarity=0.262 Sum_probs=40.6
Q ss_pred CCEEEeeccCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCccee
Q 038452 246 VPIVVAETGWPSAGDPRESSA-----TVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFG 319 (438)
Q Consensus 246 ~~vvV~ETGWPS~G~~~~~~a-----s~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wG 319 (438)
+||+|+|-|........+.+. =++--+.+++.+.+.+. .|-+. .-+|.-++.|- .|..| ...+.||
T Consensus 366 ~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~--dGv~V-----~GY~~WSl~Dn~Ew~~G-~y~~RfG 437 (474)
T PRK09852 366 KPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAIA--DGIPL-----MGYTTWGCIDLVSASTG-EMSKRYG 437 (474)
T ss_pred CCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHH--CCCCE-----EEEEeecccccccccCC-Cccceee
Confidence 579999999875432111111 12223344444444443 34322 24666777773 34444 3678999
Q ss_pred cccCCCC
Q 038452 320 LFKQDFT 326 (438)
Q Consensus 320 lf~~d~~ 326 (438)
|++.|.+
T Consensus 438 Lv~VD~~ 444 (474)
T PRK09852 438 FVYVDRD 444 (474)
T ss_pred eEEECCC
Confidence 9987754
No 48
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=22.68 E-value=1.6e+02 Score=31.77 Aligned_cols=74 Identities=14% Similarity=0.223 Sum_probs=41.4
Q ss_pred CCEEEeeccCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCC-CCCCCCCCCccee
Q 038452 246 VPIVVAETGWPSAGDPRESS-----ATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNE-NKKPGATSERNFG 319 (438)
Q Consensus 246 ~~vvV~ETGWPS~G~~~~~~-----as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE-~~K~g~~~E~~wG 319 (438)
+||+|+|-|........+.+ -=++--+.+++.+.+.+. ..|-+. .-+|.-++.|- .|..| +..+.||
T Consensus 369 ~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~-~dGv~v-----~GY~~WSl~DnfEw~~G-~y~~RfG 441 (477)
T PRK15014 369 KPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVT-YDGVDL-----MGYTPWGCIDCVSFTTG-QYSKRYG 441 (477)
T ss_pred CCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHHH-HcCCCE-----EEEeeccchhhhcccCC-CccCccc
Confidence 57999999998643211111 112233444444544442 123322 34677777773 45554 4789999
Q ss_pred cccCCCC
Q 038452 320 LFKQDFT 326 (438)
Q Consensus 320 lf~~d~~ 326 (438)
|++.|.+
T Consensus 442 l~~VD~~ 448 (477)
T PRK15014 442 FIYVNKH 448 (477)
T ss_pred eEEECCC
Confidence 9987654
No 49
>cd06150 YjgF_YER057c_UK114_like_2 This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=21.56 E-value=1.4e+02 Score=24.83 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=23.4
Q ss_pred chHHhHHHHHHHHHHHHHHcCC--Cc-eeeec
Q 038452 119 DWIYNLVPAMKSINNALIEAGI--KD-IKIST 147 (438)
Q Consensus 119 ~~~~~Ll~am~nv~~aL~~~gl--~~-IkVsT 147 (438)
....+.-.+++||++.|+++|. ++ ||++.
T Consensus 26 ~~~~Q~~~~~~nl~~~L~~~G~~~~dvvk~~v 57 (105)
T cd06150 26 DITGQTRQVLAKIDALLAEAGSDKSRILSATI 57 (105)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4678899999999999999997 44 45554
No 50
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=20.47 E-value=2.6e+02 Score=28.98 Aligned_cols=138 Identities=19% Similarity=0.315 Sum_probs=75.2
Q ss_pred eccCCCCCCCHH---HHHHHHHhcC-------------------chHHHHHHhhCCCEEEE--------EecCCCccccc
Q 038452 32 YGTIANNLPKPA---EVANFLKTKT-------------------TIDILRAFANTNISVTV--------SVGNGDIPALV 81 (438)
Q Consensus 32 yg~~~~nlpsp~---~vv~ll~s~~-------------------~~~vL~A~~~tgi~v~v--------Gv~n~~l~~~a 81 (438)
|-+.|=+ |+++ ++++.++++. |.-.++-|-..|++++| |++|+....+.
T Consensus 188 hNPTGmD-PT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnlt 266 (410)
T KOG1412|consen 188 HNPTGMD-PTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLT 266 (410)
T ss_pred cCCCCCC-CCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceE
Confidence 4444433 5665 4667787765 67888888899999876 66776544332
Q ss_pred C---hHHHHHHHHhhccc------cCC-C--ceEEEEEeccccccCCC-----cchHHhHHHHHHHHHHHHHHcCCCcee
Q 038452 82 Q---LPAAKNWVAANIVP------FYP-S--TKIIRVVVGNEIMQSAN-----KDWIYNLVPAMKSINNALIEAGIKDIK 144 (438)
Q Consensus 82 ~---~~~A~~wv~~~v~~------~~p-~--~~I~~I~VGNEvl~~~~-----~~~~~~Ll~am~nv~~aL~~~gl~~Ik 144 (438)
- ..+-..-|++.+.. ..| + .+|. -|+|.... ......+-..|++.|++|++.= +.
T Consensus 267 vv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV-----~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L---~a 338 (410)
T KOG1412|consen 267 VVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIV-----HKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHL---VA 338 (410)
T ss_pred EEecChhHHHHHHHHHHHHHhhccCCCcchhhHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 1 11111112222110 011 1 1121 23343310 1235567778888999987531 57
Q ss_pred eecccccccccccCCCCCcccc-CCcchhhhhhHHHHHHhcCC
Q 038452 145 ISTPNTLGFLGVSEPPSAGKFR-EGYDKDIIAPMLEFLRETKS 186 (438)
Q Consensus 145 VsT~~~~~vl~~s~pPS~g~F~-~~~~~~~~~~~l~fL~~~~d 186 (438)
..||-+||.+.+ -.|.|. ..+. ...+++|.++..
T Consensus 339 L~TPGtWDHI~~----QiGMFSyTGLt----p~qV~~li~~h~ 373 (410)
T KOG1412|consen 339 LKTPGTWDHITQ----QIGMFSYTGLT----PAQVDHLIENHK 373 (410)
T ss_pred cCCCCcHHHHHh----hccceeecCCC----HHHHHHHHHhce
Confidence 889999998765 245552 3443 235677755443
Done!