BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038458
SVIRPLDPGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFPCQVFTFGSV
PLKTYLPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQYIQAEVKII
KCLVDNFVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHH
GLISSYALVTLVLYIFHVFNGSFAGPLEVLYRFLEFFSKFDWDNFCLSLWGPVPISLLPD
VTAEPPRKDGGVLLLSKSFLDSCRYAYADFPGGQENQGQPFVSKHFNVIDPLRVNNNLGR
SVSKGNFFRIRTAFTFRAKGLARLLDCPNEDLYNEVNQFFMNTRDRH

High Scoring Gene Products

Symbol, full name Information P value
AT3G61690 protein from Arabidopsis thaliana 1.3e-139
AT3G51620 protein from Arabidopsis thaliana 2.7e-93
AT3G56320 protein from Arabidopsis thaliana 5.8e-82
AT2G40520 protein from Arabidopsis thaliana 7.2e-68
gld-4 gene from Caenorhabditis elegans 0.00018

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038458
        (347 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2076795 - symbol:AT3G61690 species:3702 "Arabi...  1366  1.3e-139  1
TAIR|locus:2081885 - symbol:AT3G51620 "AT3G51620" species...   929  2.7e-93   1
TAIR|locus:2078426 - symbol:AT3G56320 species:3702 "Arabi...   822  5.8e-82   1
TAIR|locus:2061868 - symbol:AT2G40520 "AT2G40520" species...   689  7.2e-68   1
POMBASE|SPAC12G12.13c - symbol:cid14 "poly(A) polymerase ...   147  3.8e-07   1
WB|WBGene00014115 - symbol:gld-4 species:6239 "Caenorhabd...   124  0.00018   1


>TAIR|locus:2076795 [details] [associations]
            symbol:AT3G61690 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0000226
            "microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
            "cytokinesis by cell plate formation" evidence=RCA]
            InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
            IPI:IPI00523694 RefSeq:NP_191728.2 UniGene:At.21960
            ProteinModelPortal:F4JFF2 PRIDE:F4JFF2 EnsemblPlants:AT3G61690.1
            GeneID:825342 KEGG:ath:AT3G61690 OMA:ESSWDGS Uniprot:F4JFF2
        Length = 1303

 Score = 1366 (485.9 bits), Expect = 1.3e-139, P = 1.3e-139
 Identities = 262/348 (75%), Positives = 293/348 (84%)

Query:     1 SVIRPLDPGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFP-CQVFTFGS 59
             SV RPLD  RW KAE+ TA+LIA IQP+P SE+RRNAVA+YVRRLI++CFP  Q+F FGS
Sbjct:    29 SVTRPLDAERWAKAEDRTAKLIACIQPNPPSEDRRNAVASYVRRLIMECFPQVQIFMFGS 88

Query:    60 VPLKTYLPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQYIQAEVKI 119
             VPLKTYLPD DIDL AFS +Q LKD+WA+LVRDMLE EEKNE+AEF VKEVQYIQAEVKI
Sbjct:    89 VPLKTYLPDGDIDLTAFSANQNLKDSWANLVRDMLEKEEKNENAEFHVKEVQYIQAEVKI 148

Query:   120 IKCLVDNFVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGH 179
             IKCLV+N VVDI+FNQ+GGLCTLCFL+EVDH IN+NHLFKRSIILIKAWCYYESRILG H
Sbjct:   149 IKCLVENIVVDISFNQIGGLCTLCFLEEVDHYINQNHLFKRSIILIKAWCYYESRILGAH 208

Query:   180 HGLISSYALVTLVLYIFHVFNGSFAGPLEVLYRFLEFFSKFDWDNFCLSLWGPVPISLLP 239
             HGLIS+YAL TLVLYIF++FN SF+GPLEVLYRFLEFFSKFDW NFCLSLWGPVP+S LP
Sbjct:   209 HGLISTYALETLVLYIFYLFNNSFSGPLEVLYRFLEFFSKFDWQNFCLSLWGPVPVSSLP 268

Query:   240 DVTAEPPRKDGGVLLLSKSFLDSCRYAYADFPGGQENQGQPFVSKHFNVIDPLRVNNNLG 299
             DVTAEPPR+D G L +S++F  +C   YA     QE QGQPFVSKHFNVIDPLR NNNLG
Sbjct:   269 DVTAEPPRRDVGELRVSEAFYRACSRVYAVNIAPQEIQGQPFVSKHFNVIDPLRENNNLG 328

Query:   300 RSVSKGNXXXXXXXXXXXXKGLARLLDCPNEDLYNEVNQFFMNTRDRH 347
             RSVSKGN            K L RLL+CP E+L +EVNQFFMNT +RH
Sbjct:   329 RSVSKGNFFRIRSAFTLGAKKLTRLLECPKENLIHEVNQFFMNTWERH 376


>TAIR|locus:2081885 [details] [associations]
            symbol:AT3G51620 "AT3G51620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GO:GO:0016740 IPI:IPI00542850
            RefSeq:NP_850678.2 UniGene:At.660 ProteinModelPortal:F4J4G2
            PRIDE:F4J4G2 EnsemblPlants:AT3G51620.2 GeneID:824325
            KEGG:ath:AT3G51620 OMA:VETPENG PhylomeDB:F4J4G2 Uniprot:F4J4G2
        Length = 829

 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 185/344 (53%), Positives = 237/344 (68%)

Query:     5 PLD-PGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFPCQVFTFGSVPLK 63
             PL+ P  W++ EE T E+I ++ P   SE+RR  V  YV++LI     C+V +FGSVPLK
Sbjct:    27 PLNQPELWMRVEEATREIIEQVHPTLVSEDRRRDVILYVQKLIRMTLGCEVHSFGSVPLK 86

Query:    64 TYLPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQYIQAEVKIIKCL 123
             TYLPD DIDL AF      ++  A  V  +LE EE N  ++F VK+VQ I+AEVK++KCL
Sbjct:    87 TYLPDGDIDLTAFGGLYH-EEELAAKVFAVLEREEHNLSSQFVVKDVQLIRAEVKLVKCL 145

Query:   124 VDNFVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHHGLI 183
             V N VVDI+FNQ+GG+CTLCFL+++DHLI ++HLFKRSIILIKAWCYYESRILG  HGLI
Sbjct:   146 VQNIVVDISFNQIGGICTLCFLEKIDHLIGKDHLFKRSIILIKAWCYYESRILGAFHGLI 205

Query:   184 SSYALVTLVLYIFHVFNGSFAGPLEVLYRFLEFFSKFDWDNFCLSLWGPVPISLLPDVTA 243
             S+YAL TLVLYIFH+F+ S  GPL VLY+FL++FSKFDWD++C+SL GPV +S LPD+  
Sbjct:   206 STYALETLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPVCLSSLPDIVV 265

Query:   244 EPPRKDGGVLLLSKSFLDSCRYAYADFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVS 303
             E P   G  LLL+  FL  C   Y+    G E   + F SKH N++DPL+  NNLGRSVS
Sbjct:   266 ETPENGGEDLLLTSEFLKECLEMYSVPSRGFETNPRGFQSKHLNIVDPLKETNNLGRSVS 325

Query:   304 KGNXXXXXXXXXXXXKGLARLLDCPNEDLYNEVNQFFMNTRDRH 347
             KGN            + L +L    +E + +E+ +FF N   RH
Sbjct:   326 KGNFYRIRSAFTYGARKLGQLFLQSDEAISSELRKFFSNMLLRH 369


>TAIR|locus:2078426 [details] [associations]
            symbol:AT3G56320 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA;ISS]
            InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
            HOGENOM:HOG000084944 ProtClustDB:CLSN2680151 EMBL:BT008327
            EMBL:AK228086 IPI:IPI00522650 RefSeq:NP_191191.2 UniGene:At.23883
            UniGene:At.71191 ProteinModelPortal:Q7Y227 IntAct:Q7Y227
            PaxDb:Q7Y227 PRIDE:Q7Y227 EnsemblPlants:AT3G56320.1 GeneID:824799
            KEGG:ath:AT3G56320 TAIR:At3g56320 eggNOG:NOG311156
            InParanoid:Q7Y227 OMA:ERESEFH PhylomeDB:Q7Y227
            Genevestigator:Q7Y227 Uniprot:Q7Y227
        Length = 603

 Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
 Identities = 161/343 (46%), Positives = 226/343 (65%)

Query:     5 PLDPGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFPCQVFTFGSVPLKT 64
             P+D   W+ AEE   E++  IQP   S+  RN +  YVR LI+     +VF+FGSVPLKT
Sbjct:    34 PIDADSWMIAEERAHEILCTIQPALVSDRSRNEIIDYVRTLIMSHEGIEVFSFGSVPLKT 93

Query:    65 YLPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQYIQAEVKIIKCLV 124
             YLPD DIDL   +  Q + D +   +   L+NEE+   +EF   +VQ+I A+VK+IKC +
Sbjct:    94 YLPDGDIDLTVLTK-QNMDDDFYGQLCSRLQNEERE--SEFHATDVQFIPAQVKVIKCNI 150

Query:   125 DNFVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHHGLIS 184
              N  VDI+FNQ  GLC LCFL++VD L   +HLFKRSIIL+KAWCYYESRILG + GLIS
Sbjct:   151 RNIAVDISFNQTAGLCALCFLEQVDQLFGRDHLFKRSIILVKAWCYYESRILGANTGLIS 210

Query:   185 SYALVTLVLYIFHVFNGSFAGPLEVLYRFLEFFSKFDWDNFCLSLWGPVPISLLPDVTAE 244
             +YAL  LVLYI ++F+ S +GPL VLY+FL+++  FDW+N+C+S+ GPVPIS LP++TA 
Sbjct:   211 TYALAVLVLYIINLFHSSLSGPLAVLYKFLDYYGSFDWNNYCISVNGPVPISSLPELTAA 270

Query:   245 PPRKDGGVLLLSKSFLDSCRYAYADFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSK 304
              P ++G  LLL + FL +C   Y+      ++ G  F  KH N++DPL+ +NNLG+SV++
Sbjct:   271 SP-ENGHELLLDEKFLRNCVELYSAPTKAVDSNGLEFPIKHLNIVDPLKYSNNLGKSVTQ 329

Query:   305 GNXXXXXXXXXXXXKGLARLLDCPNEDLYNEVNQFFMNTRDRH 347
             GN            + L  +L  P + +   + +FF N+ +R+
Sbjct:   330 GNVQRIRHAFTLGARKLRDVLSLPGDTMGWRLEKFFRNSLERN 372


>TAIR|locus:2061868 [details] [associations]
            symbol:AT2G40520 "AT2G40520" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA;ISS]
            InterPro:IPR002934 Pfam:PF01909 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0016779 EMBL:AY924760
            IPI:IPI00525074 RefSeq:NP_001078031.1 RefSeq:NP_001118485.1
            RefSeq:NP_001118486.1 RefSeq:NP_850331.1 UniGene:At.37036
            UniGene:At.68912 ProteinModelPortal:Q5BPR8 PRIDE:Q5BPR8
            EnsemblPlants:AT2G40520.1 EnsemblPlants:AT2G40520.2
            EnsemblPlants:AT2G40520.3 EnsemblPlants:AT2G40520.4 GeneID:818647
            KEGG:ath:AT2G40520 TAIR:At2g40520 HOGENOM:HOG000084944
            InParanoid:Q5BPR8 OMA:EKFFREC PhylomeDB:Q5BPR8
            ProtClustDB:CLSN2680151 Genevestigator:Q5BPR8 Uniprot:Q5BPR8
        Length = 502

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 144/343 (41%), Positives = 214/343 (62%)

Query:     5 PLDPGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFPCQVFTFGSVPLKT 64
             P++   WL AE    E++  IQP+  +E  RN + + ++ L+ +    +V+ FGS+PLKT
Sbjct:    27 PIEAEVWLIAEARAQEILCAIQPNYLAERSRNKIISNLQTLLWERLGIEVYLFGSMPLKT 86

Query:    65 YLPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQYIQAEVKIIKCLV 124
             YLPD DIDL   +   + +D  A  V  +LE E  N  ++ +V  VQY+QA+VK+IKC +
Sbjct:    87 YLPDGDIDLTVLTHHASEEDC-ARAVCCVLEAEMGN--SDLQVTGVQYVQAKVKVIKCSI 143

Query:   125 DNFVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHHGLIS 184
              +   DI+FNQL GL  LCFL++VD     +HLFK+SIIL+KAWC+YESRILG + GLIS
Sbjct:   144 RDVAFDISFNQLAGLGALCFLEQVDKAFGRDHLFKKSIILVKAWCFYESRILGANSGLIS 203

Query:   185 SYALVTLVLYIFHVFNGSFAGPLEVLYRFLEFFSKFDWDNFCLSLWGPVPISLLPDVTAE 244
             +YAL  LVL I ++   S +GPL VLY+F+ ++  FDW N+C+++ GPVPIS LPD+T E
Sbjct:   204 TYALAILVLNIVNMSYSSLSGPLAVLYKFINYYGSFDWKNYCVTVTGPVPISSLPDIT-E 262

Query:   245 PPRKDGGVLLLSKSFLDSCRYAYADFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSK 304
                 +   + L + F   C   Y+   G  E   + F  K++N++DPL+ +NNLGRSV+K
Sbjct:   263 TGNHE---VFLDEKFFRECMELYSGETGVVEASRKYFPVKYYNILDPLKHSNNLGRSVTK 319

Query:   305 GNXXXXXXXXXXXXKGLARLLDCPNEDLYNEVNQFFMNTRDRH 347
             GN            + L  +L  P E++  ++ +FF  + +R+
Sbjct:   320 GNMVRLRNCFMLGVQKLRDVLTLPGENVGWKLEKFFNVSLERN 362


>POMBASE|SPAC12G12.13c [details] [associations]
            symbol:cid14 "poly(A) polymerase Cid14" species:4896
            "Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0007000 "nucleolus organization" evidence=IMP] [GO:0016075
            "rRNA catabolic process" evidence=IGI] [GO:0016077 "snoRNA
            catabolic process" evidence=ISO] [GO:0016078 "tRNA catabolic
            process" evidence=ISO] [GO:0031125 "rRNA 3'-end processing"
            evidence=IGI] [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630
            "ncRNA polyadenylation involved in polyadenylation-dependent ncRNA
            catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0065007 "biological regulation" evidence=NAS]
            InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC12G12.13c Pfam:PF03828
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0051301
            GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006397
            GO:GO:0003723 GO:GO:0031499 GO:GO:0043630 GO:GO:0016075
            GO:GO:0016077 GO:GO:0016078 eggNOG:COG5260 GO:GO:0004652
            InterPro:IPR002058 PIR:S62544 RefSeq:NP_001018181.1
            ProteinModelPortal:Q9UTN3 STRING:Q9UTN3
            EnsemblFungi:SPAC12G12.13c.1 GeneID:3361384 KEGG:spo:SPAC12G12.13c
            KO:K03514 OMA:LISHEEE OrthoDB:EOG43BQXK NextBio:20811434
            GO:GO:0065007 GO:GO:0007000 GO:GO:0031125 Uniprot:Q9UTN3
        Length = 684

 Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 64/213 (30%), Positives = 96/213 (45%)

Query:    25 IQPDPFSEERRNAVAAYVRRLIIQCFP-CQVFTFGSVPLKTYLPDRDIDLGAFSDDQTLK 83
             I P P     R  + + + + ++Q +P   ++ FGS   K YLP  D+DL   S +   +
Sbjct:   252 ITPTPEEHAVRKTLVSRINQAVLQKWPDVSLYVFGSFETKLYLPTSDLDLVIISPEHHYR 311

Query:    84 DTWAHLVRDMLENEEKNEHAEFRVKEVQYIQ-AEVKIIKCLVDNFV---VDIAFNQLGGL 139
              T     +DM       +  +    EVQ I  A V IIK  VD      VDI+FNQ GGL
Sbjct:   312 GT----KKDMFVLAHHLKKLKL-ASEVQVITTANVPIIK-FVDPLTKVHVDISFNQPGGL 365

Query:   140 CTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHH-GLISSYALVTLVLYIFHV 198
              T C +  V+  + +    +  +I+IK   +   R L     G +SSYA+V LV+    +
Sbjct:   366 KT-CLV--VNGFMKKYPALRPLVIIIKH--FLNMRALNEVFLGGLSSYAIVCLVVSFLQL 420

Query:   199 FNGSFAGPLE-------VLYRFLEFFSK-FDWD 223
                   G +        +L  FLE + K F +D
Sbjct:   421 HPRLSTGSMREEDNFGVLLLEFLELYGKQFYYD 453


>WB|WBGene00014115 [details] [associations]
            symbol:gld-4 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
            polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
            Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
            GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
            GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
            InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
            RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
            SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
            KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
            GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
            Uniprot:G5EFL0
        Length = 845

 Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
 Identities = 61/239 (25%), Positives = 108/239 (45%)

Query:     6 LDPGRWLKAEEITAELIARIQPDPFSEERRNAVAAYVRRLIIQCFPCQVFTFGSVPLKTY 65
             +D   W+K  EI + L  ++    F + R + +  + ++ I      ++  FGS+    +
Sbjct:    85 VDMYHWIKPNEIESRLRTKV----FEKVRDSVLRRWKQKTI------KISMFGSLRTNLF 134

Query:    66 LPDRDIDLGAFSDDQTLKDTWAHLVRDMLENEEKNEHAEFRVKEVQ-YIQAEVKIIKCLV 124
             LP  DID+    DD      W     D L    +   A+   + V  Y  A V I+K +V
Sbjct:   135 LPTSDIDVLVECDD------WVGTPGDWLAETARGLEADNIAESVMVYGGAFVPIVK-MV 187

Query:   125 DN---FVVDIAFNQLGGLCTLCFLDEVDHLINENHLFKRSIILIKAWCYYESRILGGHHG 181
             D      +DI+FN + G+    ++ +V     E  L +  ++L+K + +Y + +     G
Sbjct:   188 DRDTRLSIDISFNTVQGVRAASYIAKVKE---EFPLIEPLVLLLKQFLHYRN-LNQTFTG 243

Query:   182 LISSYALVTLVLYIFHVF-----------NGSFAGPLEVLYRFLEFFS-KFDWDNFCLS 228
              +SSY LV L++  F ++            G   G L  L RFLE +S +F+++   +S
Sbjct:   244 GLSSYGLVLLLVNFFQLYALNMRSRTIYDRGVNLGHL--LLRFLELYSLEFNFEEMGIS 300


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.142   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      347       335   0.00092  116 3  11 22  0.48    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  253 KB (2136 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.33u 0.11s 28.44t   Elapsed:  00:00:01
  Total cpu time:  28.33u 0.11s 28.44t   Elapsed:  00:00:01
  Start:  Sat May 11 08:14:42 2013   End:  Sat May 11 08:14:43 2013

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