Query 038464
Match_columns 404
No_of_seqs 157 out of 1884
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 19:42:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 99.9 5.5E-22 1.9E-26 182.3 26.7 242 84-383 40-298 (308)
2 4asc_A Kelch repeat and BTB do 99.9 1.5E-21 5E-26 180.0 28.9 249 75-382 7-287 (315)
3 3ii7_A Kelch-like protein 7; p 99.9 3.1E-22 1.1E-26 183.7 23.7 256 73-382 12-282 (306)
4 2xn4_A Kelch-like protein 2; s 99.9 2.4E-21 8.3E-26 177.4 26.8 243 84-382 31-287 (302)
5 2vpj_A Kelch-like protein 12; 99.9 1.7E-21 5.9E-26 178.3 24.6 241 84-382 32-288 (301)
6 2woz_A Kelch repeat and BTB do 99.9 1.4E-20 4.9E-25 173.6 29.5 245 75-378 18-293 (318)
7 2uvk_A YJHT; unknown function, 99.8 3.9E-18 1.3E-22 159.8 26.2 247 83-382 31-352 (357)
8 3ii7_A Kelch-like protein 7; p 99.8 2.7E-18 9.3E-23 157.3 22.8 213 114-382 11-235 (306)
9 2uvk_A YJHT; unknown function, 99.8 2.4E-18 8.2E-23 161.3 21.8 255 98-382 3-304 (357)
10 1zgk_A Kelch-like ECH-associat 99.8 3.8E-18 1.3E-22 156.5 21.9 215 110-382 20-250 (308)
11 2xn4_A Kelch-like protein 2; s 99.8 5.6E-18 1.9E-22 154.9 22.8 213 113-382 14-239 (302)
12 2vpj_A Kelch-like protein 12; 99.8 1.7E-17 5.7E-22 151.6 22.3 212 113-382 13-241 (301)
13 4asc_A Kelch repeat and BTB do 99.8 6.8E-17 2.3E-21 148.7 22.5 197 85-330 69-287 (315)
14 2woz_A Kelch repeat and BTB do 99.8 1.4E-17 4.9E-22 153.4 17.0 193 85-326 80-293 (318)
15 1k3i_A Galactose oxidase precu 99.7 3.4E-15 1.2E-19 151.1 20.2 248 85-382 221-507 (656)
16 2zwa_A Leucine carboxyl methyl 99.7 7.2E-15 2.5E-19 149.1 21.7 217 110-379 393-642 (695)
17 2zwa_A Leucine carboxyl methyl 99.6 2.4E-14 8.1E-19 145.4 19.6 204 84-332 413-646 (695)
18 1k3i_A Galactose oxidase precu 99.5 7.7E-14 2.6E-18 141.2 15.2 249 85-382 168-453 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 9.5E-11 3.2E-15 76.5 3.7 44 18-61 5-48 (53)
20 2e31_A FBS1, F-box only protei 98.9 7.7E-10 2.6E-14 98.3 4.0 49 19-67 48-97 (297)
21 2ovr_B FBW7, F-BOX/WD repeat p 98.7 0.00014 5E-09 69.1 35.6 45 19-63 16-60 (445)
22 3v7d_B Cell division control p 98.7 1.6E-05 5.4E-10 76.2 26.4 39 20-58 13-51 (464)
23 1p22_A F-BOX/WD-repeat protein 98.5 1.7E-06 5.7E-11 82.6 15.7 42 20-61 9-54 (435)
24 3l2o_B F-box only protein 4; s 97.8 1E-05 3.5E-10 71.0 2.7 48 19-66 2-49 (312)
25 2ast_B S-phase kinase-associat 97.5 4.1E-05 1.4E-09 70.2 2.9 43 18-60 5-47 (336)
26 2p1m_B Transport inhibitor res 96.7 0.00052 1.8E-08 67.9 2.6 36 20-55 4-40 (594)
27 3ogk_B Coronatine-insensitive 95.3 0.0052 1.8E-07 60.7 1.9 33 23-55 14-47 (592)
28 3q7m_A Lipoprotein YFGL, BAMB; 95.1 2 6.7E-05 39.1 22.3 222 111-377 50-303 (376)
29 3q7m_A Lipoprotein YFGL, BAMB; 94.7 2.4 8.1E-05 38.5 28.0 242 83-375 63-340 (376)
30 3dsm_A Uncharacterized protein 94.5 2.5 8.7E-05 37.7 23.7 234 84-377 65-307 (328)
31 3jrp_A Fusion protein of prote 94.4 2.7 9.3E-05 37.6 18.0 67 294-374 171-242 (379)
32 1l0q_A Surface layer protein; 94.4 2.9 9.9E-05 37.9 22.2 101 76-190 5-108 (391)
33 3dsm_A Uncharacterized protein 93.7 3.6 0.00012 36.7 21.6 223 84-375 18-256 (328)
34 3nol_A Glutamine cyclotransfer 93.4 1.4 4.9E-05 38.1 12.7 174 167-399 54-235 (262)
35 3jro_A Fusion protein of prote 93.4 4 0.00014 41.3 18.3 66 294-373 169-239 (753)
36 3mbr_X Glutamine cyclotransfer 93.3 2.1 7.3E-05 36.6 13.5 174 166-399 31-214 (243)
37 4gga_A P55CDC, cell division c 93.2 5.1 0.00017 36.9 17.7 67 112-189 114-180 (420)
38 4aez_A CDC20, WD repeat-contai 93.0 5.3 0.00018 36.5 18.7 69 110-189 99-167 (401)
39 3hfq_A Uncharacterized protein 92.1 6.1 0.00021 35.1 18.2 218 126-371 20-270 (347)
40 3u4y_A Uncharacterized protein 91.1 7.4 0.00025 34.1 26.9 278 74-382 11-314 (331)
41 4gqb_B Methylosome protein 50; 88.9 12 0.00043 33.4 17.0 69 113-189 92-160 (344)
42 1ri6_A Putative isomerase YBHE 86.8 15 0.00052 32.0 17.2 116 251-378 140-270 (343)
43 1l0q_A Surface layer protein; 86.3 18 0.00062 32.4 24.1 66 114-191 85-151 (391)
44 3mbr_X Glutamine cyclotransfer 85.7 14 0.00049 31.4 12.3 93 262-375 44-136 (243)
45 2ojh_A Uncharacterized protein 84.9 16 0.00056 30.7 19.8 32 112-143 50-82 (297)
46 3lrv_A PRE-mRNA-splicing facto 83.7 23 0.00078 31.3 21.4 65 114-189 138-203 (343)
47 3nok_A Glutaminyl cyclase; bet 82.9 20 0.00067 31.0 12.0 120 262-399 117-245 (268)
48 2hqs_A Protein TOLB; TOLB, PAL 81.6 32 0.0011 31.5 27.4 61 124-194 203-263 (415)
49 2hqs_A Protein TOLB; TOLB, PAL 81.5 32 0.0011 31.5 21.2 103 262-380 248-352 (415)
50 3jrp_A Fusion protein of prote 79.7 32 0.0011 30.3 20.1 68 114-189 69-136 (379)
51 3nok_A Glutaminyl cyclase; bet 79.4 17 0.00059 31.4 10.5 92 262-375 76-167 (268)
52 3jro_A Fusion protein of prote 78.1 59 0.002 32.6 16.9 66 115-188 68-133 (753)
53 1rwi_B Serine/threonine-protei 77.5 30 0.001 28.9 24.1 67 112-190 75-141 (270)
54 1erj_A Transcriptional repress 77.3 41 0.0014 30.3 17.0 65 114-190 134-199 (393)
55 1p22_A F-BOX/WD-repeat protein 76.7 45 0.0015 30.5 20.2 28 110-137 179-206 (435)
56 2iwa_A Glutamine cyclotransfer 76.0 38 0.0013 29.2 14.0 152 166-375 32-184 (266)
57 3dwl_C Actin-related protein 2 75.3 44 0.0015 29.6 15.2 62 123-194 32-94 (377)
58 4ggc_A P55CDC, cell division c 74.6 40 0.0014 28.8 18.0 67 112-189 34-100 (318)
59 3e5z_A Putative gluconolactona 73.5 42 0.0014 28.6 20.0 54 85-140 52-106 (296)
60 2ovr_B FBW7, F-BOX/WD repeat p 73.2 56 0.0019 29.9 21.1 66 110-189 125-190 (445)
61 2z2n_A Virginiamycin B lyase; 72.6 43 0.0015 28.3 23.5 95 85-193 80-176 (299)
62 1gxr_A ESG1, transducin-like e 71.1 49 0.0017 28.4 21.9 62 116-189 155-216 (337)
63 3bws_A Protein LP49; two-domai 70.4 62 0.0021 29.2 20.1 68 114-189 133-202 (433)
64 3vgz_A Uncharacterized protein 70.1 54 0.0019 28.4 25.6 52 85-137 71-124 (353)
65 1k8k_C P40, ARP2/3 complex 41 69.5 58 0.002 28.5 19.8 62 122-193 28-89 (372)
66 3v9f_A Two-component system se 69.3 97 0.0033 31.1 24.4 269 85-379 232-531 (781)
67 1q7f_A NHL, brain tumor CG1071 68.8 52 0.0018 27.8 18.9 67 112-189 129-196 (286)
68 4e54_B DNA damage-binding prot 68.2 72 0.0025 29.1 14.9 63 122-193 140-202 (435)
69 3v9f_A Two-component system se 68.0 1E+02 0.0035 30.9 24.0 199 113-379 416-618 (781)
70 2dg1_A DRP35, lactonase; beta 67.9 60 0.0021 28.1 14.9 64 262-326 113-177 (333)
71 3mkq_A Coatomer beta'-subunit; 67.7 1E+02 0.0035 30.7 20.4 57 123-191 34-90 (814)
72 3fm0_A Protein CIAO1; WDR39,SG 67.4 65 0.0022 28.3 15.0 99 262-377 84-186 (345)
73 2aq5_A Coronin-1A; WD40 repeat 65.7 76 0.0026 28.4 18.9 23 114-136 93-116 (402)
74 3k26_A Polycomb protein EED; W 65.7 68 0.0023 27.9 17.3 66 114-189 127-194 (366)
75 4g56_B MGC81050 protein; prote 65.6 73 0.0025 28.2 19.2 69 113-189 104-172 (357)
76 3sfz_A APAF-1, apoptotic pepti 64.6 86 0.0029 33.3 14.1 67 115-193 974-1040(1249)
77 3scy_A Hypothetical bacterial 64.1 76 0.0026 27.9 12.4 118 251-379 222-346 (361)
78 3vl1_A 26S proteasome regulato 63.9 81 0.0028 28.2 19.8 65 113-189 107-172 (420)
79 4aez_A CDC20, WD repeat-contai 62.4 88 0.003 28.0 17.0 66 114-189 228-295 (401)
80 3mkq_A Coatomer beta'-subunit; 61.8 1.3E+02 0.0045 29.9 23.1 63 114-188 67-129 (814)
81 3bws_A Protein LP49; two-domai 59.5 1E+02 0.0034 27.8 24.3 68 113-190 222-295 (433)
82 1ri6_A Putative isomerase YBHE 58.7 87 0.003 26.8 18.5 65 261-330 253-320 (343)
83 3nol_A Glutamine cyclotransfer 57.8 90 0.0031 26.7 11.4 65 113-189 51-118 (262)
84 2qc5_A Streptogramin B lactona 57.7 84 0.0029 26.3 24.3 94 84-191 42-137 (300)
85 1k8k_C P40, ARP2/3 complex 41 57.3 97 0.0033 26.9 22.9 31 348-381 253-285 (372)
86 1yfq_A Cell cycle arrest prote 57.1 94 0.0032 26.7 19.1 26 116-141 71-97 (342)
87 1kb0_A Quinohemoprotein alcoho 56.2 54 0.0019 32.5 10.0 29 349-377 173-206 (677)
88 1rwi_B Serine/threonine-protei 55.5 87 0.003 25.9 17.5 93 85-189 89-182 (270)
89 3scy_A Hypothetical bacterial 54.2 97 0.0033 27.1 10.7 99 262-373 30-130 (361)
90 3hfq_A Uncharacterized protein 53.8 41 0.0014 29.4 8.0 64 308-378 15-78 (347)
91 4aow_A Guanine nucleotide-bind 53.8 1.1E+02 0.0036 26.3 20.8 24 349-374 316-339 (340)
92 3sfz_A APAF-1, apoptotic pepti 53.7 2.2E+02 0.0077 30.0 19.1 63 113-189 1013-1076(1249)
93 1kv9_A Type II quinohemoprotei 53.4 78 0.0027 31.3 10.6 75 290-377 113-194 (668)
94 4a2l_A BT_4663, two-component 52.2 1.9E+02 0.0066 28.9 25.9 263 85-375 237-529 (795)
95 3zwl_B Eukaryotic translation 48.5 1.3E+02 0.0045 25.9 17.3 57 122-190 52-108 (369)
96 2kwv_A RAD30 homolog B, DNA po 47.3 7.7 0.00026 23.1 1.2 22 19-40 18-39 (48)
97 1yiq_A Quinohemoprotein alcoho 46.6 1.1E+02 0.0037 30.4 10.4 29 349-377 166-199 (689)
98 1yr2_A Prolyl oligopeptidase; 46.1 2.3E+02 0.0079 28.0 17.2 103 261-380 341-449 (741)
99 3no2_A Uncharacterized protein 45.8 1.4E+02 0.0047 25.4 16.5 193 111-377 1-200 (276)
100 2z2n_A Virginiamycin B lyase; 44.9 1.4E+02 0.0046 25.0 25.7 95 84-192 37-133 (299)
101 3azo_A Aminopeptidase; POP fam 44.2 2.3E+02 0.0077 27.3 20.4 81 294-380 252-333 (662)
102 1got_B GT-beta; complex (GTP-b 43.4 1.6E+02 0.0056 25.5 22.3 22 114-135 108-130 (340)
103 4h5i_A Guanine nucleotide-exch 43.2 1.7E+02 0.006 25.8 16.5 26 348-375 278-303 (365)
104 2qc5_A Streptogramin B lactona 43.0 1.5E+02 0.005 24.8 24.2 95 85-193 85-181 (300)
105 2ad6_A Methanol dehydrogenase 42.3 1.2E+02 0.0042 29.2 9.8 113 212-327 58-194 (571)
106 3iz6_a 40S ribosomal protein R 42.1 1.8E+02 0.0063 25.7 18.1 97 262-375 181-283 (380)
107 1pjx_A Dfpase, DIISOPROPYLFLUO 42.0 1.6E+02 0.0054 24.9 21.3 55 84-139 47-106 (314)
108 3g4e_A Regucalcin; six bladed 41.9 1.6E+02 0.0055 25.0 20.7 66 114-195 24-90 (297)
109 1got_B GT-beta; complex (GTP-b 41.7 1.7E+02 0.0059 25.3 19.4 54 123-188 76-129 (340)
110 3azo_A Aminopeptidase; POP fam 41.6 2.5E+02 0.0085 27.1 24.4 100 262-378 266-375 (662)
111 4a2l_A BT_4663, two-component 40.8 2.9E+02 0.0099 27.6 29.8 265 85-379 195-487 (795)
112 3u4y_A Uncharacterized protein 40.7 1.7E+02 0.0058 24.9 19.4 65 114-190 9-74 (331)
113 1r5m_A SIR4-interacting protei 38.5 2.1E+02 0.007 25.2 20.7 24 115-138 162-185 (425)
114 2ad6_A Methanol dehydrogenase 38.2 1.9E+02 0.0066 27.7 10.5 112 251-376 62-191 (571)
115 3ei3_B DNA damage-binding prot 37.5 2.1E+02 0.0072 25.0 22.7 63 123-194 95-157 (383)
116 1gxr_A ESG1, transducin-like e 37.4 1.9E+02 0.0064 24.4 20.3 73 113-193 61-134 (337)
117 4ery_A WD repeat-containing pr 37.3 1.9E+02 0.0065 24.4 23.5 22 116-137 79-100 (312)
118 2ynn_A Coatomer subunit beta'; 37.1 1.9E+02 0.0066 24.5 18.5 201 108-374 19-219 (304)
119 2iwa_A Glutamine cyclotransfer 35.8 2.1E+02 0.007 24.5 22.0 64 114-189 31-97 (266)
120 2xbg_A YCF48-like protein; pho 35.8 2.2E+02 0.0075 24.8 16.6 51 270-328 235-287 (327)
121 3dwl_C Actin-related protein 2 35.5 57 0.002 28.8 5.9 96 262-374 34-133 (377)
122 1ddw_A GLGF-domain protein hom 33.2 97 0.0033 22.9 5.7 40 124-172 11-51 (120)
123 3o4h_A Acylamino-acid-releasin 32.8 3.2E+02 0.011 25.8 17.6 57 124-191 175-231 (582)
124 3fm0_A Protein CIAO1; WDR39,SG 32.6 2.5E+02 0.0084 24.4 17.6 63 123-194 37-99 (345)
125 4e54_B DNA damage-binding prot 32.1 2.8E+02 0.0097 24.9 14.4 66 113-188 175-241 (435)
126 2pm7_B Protein transport prote 31.9 2.3E+02 0.0079 23.8 20.2 65 295-373 170-239 (297)
127 3fvz_A Peptidyl-glycine alpha- 30.5 2.6E+02 0.0089 24.0 24.3 136 125-274 70-231 (329)
128 2fp8_A Strictosidine synthase; 30.5 2.6E+02 0.0088 24.0 20.0 185 114-318 91-313 (322)
129 1w6s_A Methanol dehydrogenase 30.5 2.1E+02 0.0071 27.8 9.2 64 212-275 58-147 (599)
130 3vl1_A 26S proteasome regulato 30.4 2.8E+02 0.0097 24.4 25.0 59 253-318 305-365 (420)
131 2hz6_A Endoplasmic reticulum t 30.2 31 0.0011 31.1 3.1 13 212-224 5-17 (369)
132 3mmy_A MRNA export factor; mRN 29.4 2.7E+02 0.0091 23.8 17.2 68 115-192 54-122 (368)
133 2p4o_A Hypothetical protein; p 28.7 2.7E+02 0.0093 23.7 12.8 94 262-373 54-148 (306)
134 1kv9_A Type II quinohemoprotei 28.4 4.3E+02 0.015 25.8 12.1 26 166-194 67-94 (668)
135 2hes_X YDR267CP; beta-propelle 27.1 2.4E+02 0.0081 24.3 8.5 87 294-398 118-207 (330)
136 2be1_A Serine/threonine-protei 26.8 2.3E+02 0.008 25.2 8.2 24 114-137 10-35 (339)
137 3mmy_A MRNA export factor; mRN 25.7 3.1E+02 0.011 23.3 19.3 65 114-189 97-162 (368)
138 2ece_A 462AA long hypothetical 25.2 2E+02 0.0068 27.0 7.6 64 309-375 106-176 (462)
139 2xdw_A Prolyl endopeptidase; a 25.1 4.9E+02 0.017 25.4 21.2 100 262-378 312-422 (710)
140 1yiq_A Quinohemoprotein alcoho 23.8 5.3E+02 0.018 25.3 11.3 11 364-374 276-286 (689)
141 3bg1_A Protein SEC13 homolog; 23.5 3.4E+02 0.012 23.0 15.9 64 123-194 34-97 (316)
142 2ojh_A Uncharacterized protein 23.4 3E+02 0.01 22.3 23.1 103 261-380 110-214 (297)
143 1nir_A Nitrite reductase; hemo 23.3 4.7E+02 0.016 24.6 17.9 63 112-188 146-212 (543)
144 1flg_A Protein (quinoprotein e 22.1 5.3E+02 0.018 24.7 12.9 123 211-377 63-198 (582)
145 1jmx_B Amine dehydrogenase; ox 21.8 3.6E+02 0.012 22.7 18.0 192 112-377 8-289 (349)
146 1i2h_A PSD-ZIP45(homer-1C/VESL 21.8 1.7E+02 0.006 23.0 5.5 40 124-172 16-56 (168)
147 3vgz_A Uncharacterized protein 20.7 3.9E+02 0.013 22.6 21.7 100 85-191 166-266 (353)
148 1pjx_A Dfpase, DIISOPROPYLFLUO 20.5 3.7E+02 0.013 22.4 16.2 73 252-326 83-167 (314)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.91 E-value=5.5e-22 Score=182.27 Aligned_cols=242 Identities=12% Similarity=0.119 Sum_probs=178.0
Q ss_pred ceeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeCC----------CeEEEEcCCCCCeeeCCCCCCCCCCCceeE
Q 038464 84 HSIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTAS----------GKFIVSNPVTGSSRELPPLDADTENQSLHA 153 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~~----------~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~ 153 (404)
....||+.+++|..++..+.++....+++.+|.|++.++. +.+++|||.+++|..+++++. .+..++
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~ 116 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV---PRNRIG 116 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS---CCBTCE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc---CccccE
Confidence 4579999999999997666555555567778988888762 468999999999999999984 444566
Q ss_pred EEEEecCCCCCceEEEEEecccC---ceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCcee
Q 038464 154 IVMTTSSKNPSNYKLVLVYGELP---KLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVV 229 (404)
Q Consensus 154 ~~~~g~~~~~~~~kv~~~~g~~~---~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~ 229 (404)
++.+ +.+|+++||... ...+++||+.+++|+.++. +|. +..+ ..+.+++.+|++||.....
T Consensus 117 ~~~~-------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~ 181 (308)
T 1zgk_A 117 VGVI-------DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-MLTRRIGV-------GVAVLNRLLYAVGGFDGTN 181 (308)
T ss_dssp EEEE-------TTEEEEECCEETTEECCCEEEEETTTTEEEECCC-CSSCCBSC-------EEEEETTEEEEECCBCSSC
T ss_pred EEEE-------CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-CCccccce-------EEEEECCEEEEEeCCCCCC
Confidence 6555 357999987532 3569999999999999987 664 2222 3467899999998853210
Q ss_pred eecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeecccee
Q 038464 230 ATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESA 309 (404)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~ 309 (404)
..+.+..||+.+++|+.++ ++|... ..+.++..+++||++++... ...
T Consensus 182 -----------------------------~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~-~~~ 229 (308)
T 1zgk_A 182 -----------------------------RLNSAECYYPERNEWRMIT-AMNTIR-SGAGVCVLHNCIYAAGGYDG-QDQ 229 (308)
T ss_dssp -----------------------------BCCCEEEEETTTTEEEECC-CCSSCC-BSCEEEEETTEEEEECCBCS-SSB
T ss_pred -----------------------------cCceEEEEeCCCCeEeeCC-CCCCcc-ccceEEEECCEEEEEeCCCC-CCc
Confidence 0136999999999999985 355433 34567788999999998642 223
Q ss_pred eEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC---CCceEEEEECCCCceEECCCCCC
Q 038464 310 SLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA---ELFSYVLCDLVTNEWVELPKCSM 383 (404)
Q Consensus 310 ~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~---~~~~~~~yd~~~~~w~~~~~~~~ 383 (404)
.-++|.+|..+++|+++..+|.. +....++..++.|||+.... ....+.+||+++++|+.++.+|.
T Consensus 230 ~~~v~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 298 (308)
T 1zgk_A 230 LNSVERYDVETETWTFVAPMKHR--------RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTS 298 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC--------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS
T ss_pred cceEEEEeCCCCcEEECCCCCCC--------ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCC
Confidence 45688999988999999988732 22334555688998764321 23678999999999999988773
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.90 E-value=1.5e-21 Score=180.00 Aligned_cols=249 Identities=12% Similarity=0.164 Sum_probs=178.0
Q ss_pred EEEEcCCCCceeeeecCCCceeeccCC-CCCCCeeEEEecCceEEEEeCC------------CeEEEEcCCCCCeeeCCC
Q 038464 75 FLMVDHQLNHSIVFDSAEKTWKELNFP-NSSPDSIPVAASGGLVCFRTAS------------GKFIVSNPVTGSSRELPP 141 (404)
Q Consensus 75 ~~~~~~~~~~~~~~d~~~~~w~~l~~p-~~~~~~~~~~s~~Glv~~~~~~------------~~~~v~NP~t~~w~~lP~ 141 (404)
++++.. .....|||.+++|...+.| +.++....+++.+|.|++.++. +.+++|||.+++|..+++
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344443 3467999999999864444 2345556677788888887751 238999999999999999
Q ss_pred CCCCCCCCceeEEEEEecCCCCCceEEEEEeccc------CceEEEEEeCCCCceeeccccccc-ccccccccccCCccc
Q 038464 142 LDADTENQSLHAIVMTTSSKNPSNYKLVLVYGEL------PKLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHD 214 (404)
Q Consensus 142 ~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~------~~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~ 214 (404)
++. .+..++++.+ +.+|+++||.. ....+++||+.+++|+.++. +|. +..+ ..+.
T Consensus 85 ~p~---~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~-------~~~~ 146 (315)
T 4asc_A 85 LPS---PRCLFGLGEA-------LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYVVYGH-------TVLS 146 (315)
T ss_dssp BSS---CEESCEEEEE-------TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSCCBSC-------EEEE
T ss_pred CCc---chhceeEEEE-------CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCcccce-------eEEE
Confidence 983 4555666555 35899998742 13579999999999999987 665 2222 3577
Q ss_pred cCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeC
Q 038464 215 DEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECR 294 (404)
Q Consensus 215 ~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~ 294 (404)
++|++|++||...- .. ..+.+..||+.+++|+.++ ++|... ..+..+..+
T Consensus 147 ~~~~iyv~GG~~~~----------~~------------------~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~ 196 (315)
T 4asc_A 147 HMDLVYVIGGKGSD----------RK------------------CLNKMCVYDPKKFEWKELA-PMQTAR-SLFGATVHD 196 (315)
T ss_dssp ETTEEEEECCBCTT----------SC------------------BCCCEEEEETTTTEEEECC-CCSSCC-BSCEEEEET
T ss_pred ECCEEEEEeCCCCC----------Cc------------------ccceEEEEeCCCCeEEECC-CCCCch-hceEEEEEC
Confidence 99999999885210 00 0136999999999999985 355433 346678889
Q ss_pred CeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC------------CC
Q 038464 295 GELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA------------EL 362 (404)
Q Consensus 295 g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~------------~~ 362 (404)
|+||++++.... ...-++|.+|..+++|+++..+|.. +....++..++.|||+.... ..
T Consensus 197 ~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 267 (315)
T 4asc_A 197 GRIIVAAGVTDT-GLTSSAEVYSITDNKWAPFEAFPQE--------RSSLSLVSLVGTLYAIGGFATLETESGELVPTEL 267 (315)
T ss_dssp TEEEEEEEECSS-SEEEEEEEEETTTTEEEEECCCSSC--------CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEeccCCC-CccceEEEEECCCCeEEECCCCCCc--------ccceeEEEECCEEEEECCccccCcCCcccccccc
Confidence 999999987522 2345789999999999999988732 22334556688998765321 12
Q ss_pred ceEEEEECCCCceEECCCCC
Q 038464 363 FSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 363 ~~~~~yd~~~~~w~~~~~~~ 382 (404)
..+++||+++++|+.+.+.|
T Consensus 268 ~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 268 NDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp EEEEEEETTTTEEEEEESCS
T ss_pred CcEEEecCCCChhhhhccCC
Confidence 46889999999999996655
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.90 E-value=3.1e-22 Score=183.67 Aligned_cols=256 Identities=14% Similarity=0.162 Sum_probs=185.2
Q ss_pred CeEEEEcCC--CCceeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC-----CCeEEEEcCCCCCeeeCCCCCCC
Q 038464 73 PWFLMVDHQ--LNHSIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA-----SGKFIVSNPVTGSSRELPPLDAD 145 (404)
Q Consensus 73 p~~~~~~~~--~~~~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~-----~~~~~v~NP~t~~w~~lP~~~~~ 145 (404)
..++++... ......||+.+++|..++.++.++....+++.+|.+++.++ .+.+++|||.+++|..+++++.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~- 90 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT- 90 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS-
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc-
Confidence 345555432 34567999999999999876666656667778999998876 3679999999999999999884
Q ss_pred CCCCceeEEEEEecCCCCCceEEEEEeccc----CceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEE
Q 038464 146 TENQSLHAIVMTTSSKNPSNYKLVLVYGEL----PKLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVY 220 (404)
Q Consensus 146 ~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~----~~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly 220 (404)
.+..++++.+ +.+|+++||.. ....+++||+.+++|+.++. +|. +..+ ..+.++|++|
T Consensus 91 --~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iy 153 (306)
T 3ii7_A 91 --PRDSLAACAA-------EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS-MLTQRCSH-------GMVEANGLIY 153 (306)
T ss_dssp --CCBSCEEEEE-------TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC-CSSCCBSC-------EEEEETTEEE
T ss_pred --cccceeEEEE-------CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC-CcCCccee-------EEEEECCEEE
Confidence 4445666555 46799998753 23579999999999999987 664 2222 3477899999
Q ss_pred EeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEE
Q 038464 221 FLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVV 300 (404)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v 300 (404)
+++|.... .... ...+.+..||+++++|+.++ ++|... ..+.++.++|+||++
T Consensus 154 v~GG~~~~-----------~~~~--------------~~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~~i~v~ 206 (306)
T 3ii7_A 154 VCGGSLGN-----------NVSG--------------RVLNSCEVYDPATETWTELC-PMIEAR-KNHGLVFVKDKIFAV 206 (306)
T ss_dssp EECCEESC-----------TTTC--------------EECCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEE
T ss_pred EECCCCCC-----------CCcc--------------cccceEEEeCCCCCeEEECC-Cccchh-hcceEEEECCEEEEE
Confidence 99874210 0000 00136999999999999986 355433 346778889999999
Q ss_pred EeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC---CCceEEEEECCCCceEE
Q 038464 301 VLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA---ELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 301 ~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~---~~~~~~~yd~~~~~w~~ 377 (404)
++.... ...-++|.+|..+++|+++..+|. .+....++..++.|||+.... ....+.+||+++++|+.
T Consensus 207 GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~--------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 207 GGQNGL-GGLDNVEYYDIKLNEWKMVSPMPW--------KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp CCEETT-EEBCCEEEEETTTTEEEECCCCSC--------CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred eCCCCC-CCCceEEEeeCCCCcEEECCCCCC--------CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 986522 234468889998889999998883 222344556689998765422 23688999999999999
Q ss_pred CCCCC
Q 038464 378 LPKCS 382 (404)
Q Consensus 378 ~~~~~ 382 (404)
++++|
T Consensus 278 ~~~~~ 282 (306)
T 3ii7_A 278 NSKVR 282 (306)
T ss_dssp EEEEE
T ss_pred CCCcc
Confidence 88766
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.90 E-value=2.4e-21 Score=177.38 Aligned_cols=243 Identities=17% Similarity=0.129 Sum_probs=176.4
Q ss_pred ceeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC------CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEE
Q 038464 84 HSIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA------SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMT 157 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~------~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~ 157 (404)
....||+.+++|..++..+.++....+++.+|.|++.++ .+.+++|||.+++|..+++++. .+..++++.+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~ 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD---RRSTLGAAVL 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS---CCBSCEEEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc---cccceEEEEE
Confidence 356899999999998765555544556777999998876 3578999999999999999984 4555666555
Q ss_pred ecCCCCCceEEEEEecccC---ceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceeeecc
Q 038464 158 TSSKNPSNYKLVLVYGELP---KLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNM 233 (404)
Q Consensus 158 g~~~~~~~~kv~~~~g~~~---~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~ 233 (404)
+.+|+++||... ...+++||+.+++|+.++. +|. +..+ ..+.++|++|++||....
T Consensus 108 -------~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~----- 167 (302)
T 2xn4_A 108 -------NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP-MNTRRSSV-------GVGVVGGLLYAVGGYDVA----- 167 (302)
T ss_dssp -------TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC-CSSCCBSC-------EEEEETTEEEEECCEETT-----
T ss_pred -------CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC-CCCcccCc-------eEEEECCEEEEEeCCCCC-----
Confidence 357899987532 2579999999999999987 664 2222 346789999999874210
Q ss_pred cCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEE
Q 038464 234 QRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRV 313 (404)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~v 313 (404)
... ..+.+..||+++++|+.++ ++|... ..+.++..+|+||++++.+. ....-++
T Consensus 168 ----~~~------------------~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~-~~~~~~~ 222 (302)
T 2xn4_A 168 ----SRQ------------------CLSTVECYNATTNEWTYIA-EMSTRR-SGAGVGVLNNLLYAVGGHDG-PLVRKSV 222 (302)
T ss_dssp ----TTE------------------ECCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEECCBSS-SSBCCCE
T ss_pred ----CCc------------------cccEEEEEeCCCCcEEECC-CCcccc-ccccEEEECCEEEEECCCCC-CcccceE
Confidence 000 0126999999999999985 355433 34667888999999998642 1223458
Q ss_pred EEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCC---CceEEEEECCCCceEECC-CCC
Q 038464 314 WRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELP-KCS 382 (404)
Q Consensus 314 w~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~-~~~ 382 (404)
|.+|..+++|+++..+|.. +....++..++.|||+..... ...+++||+++++|+.++ .+|
T Consensus 223 ~~yd~~~~~W~~~~~~~~~--------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 223 EVYDPTTNAWRQVADMNMC--------RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp EEEETTTTEEEEECCCSSC--------CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS
T ss_pred EEEeCCCCCEeeCCCCCCc--------cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC
Confidence 8899988999999988732 223345566899987643221 356899999999999997 555
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.89 E-value=1.7e-21 Score=178.25 Aligned_cols=241 Identities=9% Similarity=0.097 Sum_probs=177.0
Q ss_pred ceeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC------CCeEEEEcCCCCC---eeeCCCCCCCCCCCceeEE
Q 038464 84 HSIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA------SGKFIVSNPVTGS---SRELPPLDADTENQSLHAI 154 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~------~~~~~v~NP~t~~---w~~lP~~~~~~~~~~~~~~ 154 (404)
....||+.+++|..++..+.++....+++.+|.+++.++ .+.+++|||.+++ |..+++++. .+..+++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~---~r~~~~~ 108 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV---RRGLAGA 108 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS---CCBSCEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC---CccceeE
Confidence 456899999999998865555555557778888888876 3579999999999 999999884 4445666
Q ss_pred EEEecCCCCCceEEEEEecccC---ceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceee
Q 038464 155 VMTTSSKNPSNYKLVLVYGELP---KLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVA 230 (404)
Q Consensus 155 ~~~g~~~~~~~~kv~~~~g~~~---~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~ 230 (404)
+.+ +.+|+++||... ...+++||+.+++|+.++. +|. +..+ ..+.++|++|++||.....
T Consensus 109 ~~~-------~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~- 172 (301)
T 2vpj_A 109 TTL-------GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-MQTAREGA-------GLVVASGVIYCLGGYDGLN- 172 (301)
T ss_dssp EEE-------TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-CSSCCBSC-------EEEEETTEEEEECCBCSSC-
T ss_pred EEE-------CCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-CCCCcccc-------eEEEECCEEEEECCCCCCc-
Confidence 554 367999987532 3579999999999999987 654 2222 3467899999998853200
Q ss_pred ecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceee
Q 038464 231 TNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESAS 310 (404)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~ 310 (404)
..+.+..||+++++|+.++ ++|... ..+.++..+++||++++.... ...
T Consensus 173 ----------------------------~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~i~v~GG~~~~-~~~ 221 (301)
T 2vpj_A 173 ----------------------------ILNSVEKYDPHTGHWTNVT-PMATKR-SGAGVALLNDHIYVVGGFDGT-AHL 221 (301)
T ss_dssp ----------------------------BCCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEECCBCSS-SBC
T ss_pred ----------------------------ccceEEEEeCCCCcEEeCC-CCCccc-ccceEEEECCEEEEEeCCCCC-ccc
Confidence 0136999999999999985 355433 346678889999999986422 224
Q ss_pred EEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCC---CceEEEEECCCCceEECCCCC
Q 038464 311 LRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 311 ~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~~~~ 382 (404)
-++|.+|..+++|+++..+|.. +....++..++.|||...... ...+++||+++++|+.++++|
T Consensus 222 ~~v~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 222 SSVEAYNIRTDSWTTVTSMTTP--------RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSC--------CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEEEeCCCCcEEECCCCCCc--------ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC
Confidence 4588889988899999988732 223345566889987543221 257899999999999998765
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.89 E-value=1.4e-20 Score=173.62 Aligned_cols=245 Identities=16% Similarity=0.220 Sum_probs=175.5
Q ss_pred EEEEcCCCCceeeeecCCCceeeccCCC-CCCCeeEEEecCceEEEEeCC------------CeEEEEcCCCCCeeeCCC
Q 038464 75 FLMVDHQLNHSIVFDSAEKTWKELNFPN-SSPDSIPVAASGGLVCFRTAS------------GKFIVSNPVTGSSRELPP 141 (404)
Q Consensus 75 ~~~~~~~~~~~~~~d~~~~~w~~l~~p~-~~~~~~~~~s~~Glv~~~~~~------------~~~~v~NP~t~~w~~lP~ 141 (404)
++++.. .....|||.+++|...+.+. .++....+++.+|.|++.++. ..+++|||.+++|..+++
T Consensus 18 i~~~GG--~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND--TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS--SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc--cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 444443 23679999999999865542 345556677788888888761 128899999999999999
Q ss_pred CCCCCCCCceeEEEEEecCCCCCceEEEEEeccc---C--ceEEEEEeCCCCceeeccccccc-ccccccccccCCcccc
Q 038464 142 LDADTENQSLHAIVMTTSSKNPSNYKLVLVYGEL---P--KLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDD 215 (404)
Q Consensus 142 ~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~---~--~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~ 215 (404)
++. .+..++++.+ +.+|+++||.. . ...+++||+.+++|+.++. +|. +..+ ..+.+
T Consensus 96 ~p~---~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~-------~~~~~ 157 (318)
T 2woz_A 96 LPS---ARCLFGLGEV-------DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGH-------NVISH 157 (318)
T ss_dssp BSS---CBCSCEEEEE-------TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSCEESC-------EEEEE
T ss_pred CCc---cccccceEEE-------CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCccccc-------EEEEE
Confidence 984 4445666555 35799998753 1 2579999999999999987 665 2222 34678
Q ss_pred CCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCC
Q 038464 216 EDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRG 295 (404)
Q Consensus 216 ~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g 295 (404)
+|++|++||...- .. ..+.+..||+++++|+.++ ++|... ..+.++..+|
T Consensus 158 ~~~iyv~GG~~~~----------~~------------------~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~ 207 (318)
T 2woz_A 158 NGMIYCLGGKTDD----------KK------------------CTNRVFIYNPKKGDWKDLA-PMKTPR-SMFGVAIHKG 207 (318)
T ss_dssp TTEEEEECCEESS----------SC------------------BCCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETT
T ss_pred CCEEEEEcCCCCC----------CC------------------ccceEEEEcCCCCEEEECC-CCCCCc-ccceEEEECC
Confidence 9999999874210 00 0136999999999999985 355433 3456778899
Q ss_pred eEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC------------CCc
Q 038464 296 ELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA------------ELF 363 (404)
Q Consensus 296 ~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~------------~~~ 363 (404)
+||+++|... ....-++|.+|..+++|+++..+|.. +....++..++.|||+.... ...
T Consensus 208 ~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~ 278 (318)
T 2woz_A 208 KIVIAGGVTE-DGLSASVEAFDLKTNKWEVMTEFPQE--------RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVN 278 (318)
T ss_dssp EEEEEEEEET-TEEEEEEEEEETTTCCEEECCCCSSC--------CBSCEEEEETTEEEEECCBCCBC----CCBCCBCC
T ss_pred EEEEEcCcCC-CCccceEEEEECCCCeEEECCCCCCc--------ccceEEEEECCEEEEECCeeccCCCCceeccceee
Confidence 9999998753 23345788999999999999988742 22334556788998754321 135
Q ss_pred eEEEEECCCCceEEC
Q 038464 364 SYVLCDLVTNEWVEL 378 (404)
Q Consensus 364 ~~~~yd~~~~~w~~~ 378 (404)
.+++||+++++|+.+
T Consensus 279 ~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 279 DIWKYEDDKKEWAGM 293 (318)
T ss_dssp CEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCEehhh
Confidence 789999999999988
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.82 E-value=3.9e-18 Score=159.80 Aligned_cols=247 Identities=11% Similarity=0.051 Sum_probs=165.4
Q ss_pred CceeeeecC--CCceeeccCCC-CCCCeeEEEecCceEEEEeCC-----------CeEEEEcCCCCCeeeCCCCCCCCCC
Q 038464 83 NHSIVFDSA--EKTWKELNFPN-SSPDSIPVAASGGLVCFRTAS-----------GKFIVSNPVTGSSRELPPLDADTEN 148 (404)
Q Consensus 83 ~~~~~~d~~--~~~w~~l~~p~-~~~~~~~~~s~~Glv~~~~~~-----------~~~~v~NP~t~~w~~lP~~~~~~~~ 148 (404)
.....||+. +++|..++..+ .++....+++.+|.|++.++. +.+++|||.+++|..+++++ +..
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~ 108 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMG 108 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSC
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--Ccc
Confidence 456789987 48899997655 455556677788999988753 46899999999999999987 234
Q ss_pred CceeEEEEEecCCCCCceEEEEEecccC-------------------------------------ceEEEEEeCCCCcee
Q 038464 149 QSLHAIVMTTSSKNPSNYKLVLVYGELP-------------------------------------KLSFKVYNSCLNCWE 191 (404)
Q Consensus 149 ~~~~~~~~~g~~~~~~~~kv~~~~g~~~-------------------------------------~~~~~vy~~~~~~W~ 191 (404)
+..++++.. +.+|+++||... ...+++||+.+++|+
T Consensus 109 r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 181 (357)
T 2uvk_A 109 MAGHVTFVH-------NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS 181 (357)
T ss_dssp CSSEEEEEE-------TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE
T ss_pred cccceEEEE-------CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE
Confidence 445555444 468999987421 258999999999999
Q ss_pred eccccccc-ccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEec--
Q 038464 192 EETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNL-- 268 (404)
Q Consensus 192 ~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~-- 268 (404)
.++. +|. +... ...+.+++.+|+++|...- .. ....+..||+
T Consensus 182 ~~~~-~p~~~~~~------~~~~~~~~~iyv~GG~~~~----------~~------------------~~~~v~~~d~d~ 226 (357)
T 2uvk_A 182 YAGE-SPWYGTAG------AAVVNKGDKTWLINGEAKP----------GL------------------RTDAVFELDFTG 226 (357)
T ss_dssp EEEE-CSSCCCBS------CEEEEETTEEEEECCEEET----------TE------------------ECCCEEEEECC-
T ss_pred ECCC-CCCCCccc------ccEEEECCEEEEEeeecCC----------Cc------------------ccCceEEEEecC
Confidence 9987 664 2121 1357789999999874210 00 0125777876
Q ss_pred CCCceeeccccCCcc-ccccceeEeeCCeEEEEEeeecc----------------ceeeEEEEEEeCCCCCeEEeccCCh
Q 038464 269 TQKSFTEYPRLLPVF-SEYSIDVVECRGELLVVVLSEFL----------------ESASLRVWRFDQDNGFWHQIAAMPP 331 (404)
Q Consensus 269 ~~~~w~~i~~~~p~~-~~~~~~lv~~~g~L~~v~~~~~~----------------~~~~~~vw~l~~~~~~W~~v~~~~~ 331 (404)
++++|+.+.. +|.. ....+.++..+|+||++++.... .....+++.+|..+++|+++..+|.
T Consensus 227 ~~~~W~~~~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 305 (357)
T 2uvk_A 227 NNLKWNKLAP-VSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ 305 (357)
T ss_dssp --CEEEECCC-SSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS
T ss_pred CCCcEEecCC-CCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC
Confidence 9999999853 3322 12235578899999999986421 1123567888998889999998883
Q ss_pred hHHHHhccCcceEEEEecCCEEEEEEecCC----CceEEEEECCCCceEECCCCC
Q 038464 332 AMSHEFYGKKVDINCVAAGHQIFICFNSAE----LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~----~~~~~~yd~~~~~w~~~~~~~ 382 (404)
. +....++..+++|||+..... ...++++++++++|....+.|
T Consensus 306 ~--------r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 306 G--------RAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp C--------CBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred C--------cccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 2 222345567899998765322 257888999999998877655
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.81 E-value=2.7e-18 Score=157.32 Aligned_cols=213 Identities=15% Similarity=0.097 Sum_probs=153.6
Q ss_pred CceEEEEeC---CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEeccc--CceEEEEEeCCCC
Q 038464 114 GGLVCFRTA---SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGEL--PKLSFKVYNSCLN 188 (404)
Q Consensus 114 ~Glv~~~~~---~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~--~~~~~~vy~~~~~ 188 (404)
.+.|++.++ .+.+++|||.+++|..+++++. .+..++++.+ +.+|+++||.. ....+++||+.++
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFE---KRRDAACVFW-------DNVVYILGGSQLFPIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSC---CCBSCEEEEE-------TTEEEEECCBSSSBCCEEEEEETTTT
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCc---ccceeEEEEE-------CCEEEEEeCCCCCCcceEEEEeCCCC
Confidence 355666665 5689999999999999999884 4555666555 35789998753 2368999999999
Q ss_pred ceeeccccccc-ccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEe
Q 038464 189 CWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACN 267 (404)
Q Consensus 189 ~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD 267 (404)
+|+.++. +|. +..+ ..+.++|.+|++||.... .. ..+.+..||
T Consensus 81 ~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~----------~~------------------~~~~~~~~d 124 (306)
T 3ii7_A 81 SWYSKLG-PPTPRDSL-------AACAAEGKIYTSGGSEVG----------NS------------------ALYLFECYD 124 (306)
T ss_dssp EEEEEEC-CSSCCBSC-------EEEEETTEEEEECCBBTT----------BS------------------CCCCEEEEE
T ss_pred eEEECCC-CCccccce-------eEEEECCEEEEECCCCCC----------Cc------------------EeeeEEEEe
Confidence 9999987 664 2222 346789999999885210 00 013689999
Q ss_pred cCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccce---eeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceE
Q 038464 268 LTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLES---ASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDI 344 (404)
Q Consensus 268 ~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~---~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~ 344 (404)
+.+++|+.++ ++|... ..+.++..+|+||++++...... ..-++|.+|..+++|+++..+|.. +...
T Consensus 125 ~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--------r~~~ 194 (306)
T 3ii7_A 125 TRTESWHTKP-SMLTQR-CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA--------RKNH 194 (306)
T ss_dssp TTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC--------CBSC
T ss_pred CCCCceEeCC-CCcCCc-ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch--------hhcc
Confidence 9999999985 355433 34667788999999998652211 145688899988999999988732 2233
Q ss_pred EEEecCCEEEEEEecCC---CceEEEEECCCCceEECCCCC
Q 038464 345 NCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 345 ~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~~~~ 382 (404)
.++..++.|||+..... ...+.+||+++++|+.++++|
T Consensus 195 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 235 (306)
T 3ii7_A 195 GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP 235 (306)
T ss_dssp EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCS
T ss_pred eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC
Confidence 45556889987532211 357899999999999998877
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.81 E-value=2.4e-18 Score=161.26 Aligned_cols=255 Identities=9% Similarity=0.033 Sum_probs=155.0
Q ss_pred ccCCCCCCCeeEEEecCceEEEEeC--CCeEEEEcCC--CCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEec
Q 038464 98 LNFPNSSPDSIPVAASGGLVCFRTA--SGKFIVSNPV--TGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYG 173 (404)
Q Consensus 98 l~~p~~~~~~~~~~s~~Glv~~~~~--~~~~~v~NP~--t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g 173 (404)
|+..+.++....++..+|.||+.++ .+.++++|+. +++|..+++++. ..+..++++.+ +.+|+++||
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~--~~R~~~~~~~~-------~~~lyv~GG 73 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPG--GPRDQATSAFI-------DGNLYVFGG 73 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTT--CCCBSCEEEEE-------TTEEEEECC
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCC--CcCccceEEEE-------CCEEEEEcC
Confidence 3333333334445566999999887 6689999998 489999999882 13444666555 357999987
Q ss_pred c-c--C-----ceEEEEEeCCCCceeecccccc-c-ccccccccccCCccccCCeEEEeecCCcee---------eeccc
Q 038464 174 E-L--P-----KLSFKVYNSCLNCWEEETLLLS-R-KSEQALEVDSIDHHDDEDAVYFLSKAGNVV---------ATNMQ 234 (404)
Q Consensus 174 ~-~--~-----~~~~~vy~~~~~~W~~~~~~~p-~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~---------~~~~~ 234 (404)
. . . ...+++||+.+++|+.++. ++ . +..+ ..+..+|++|++||...-. .+++.
T Consensus 74 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~p~~r~~~-------~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 145 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKYNPKTNSWVKLMS-HAPMGMAGH-------VTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKD 145 (357)
T ss_dssp EEECTTSCEEECCCEEEEETTTTEEEECSC-CCSSCCSSE-------EEEEETTEEEEEECCCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCccceeeccEEEEeCCCCcEEECCC-CCCcccccc-------eEEEECCEEEEEeCcCCCcCcccccchhhcCCc
Confidence 6 2 1 2469999999999999988 54 3 2122 3466999999999853210 00000
Q ss_pred CCCcccccceee--ecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEE
Q 038464 235 RSPSKQYSSVIT--SKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLR 312 (404)
Q Consensus 235 ~~~~~~~~~~~~--~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~ 312 (404)
. ........ ...+.. . ....+.+..||+.+++|+.+. ++|......+.++..+++||++++.........+
T Consensus 146 ~---~~~~~~~~~~~~~~~~-~--~~~~~~v~~yd~~~~~W~~~~-~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 146 S---TAIDKINAHYFDKKAE-D--YFFNKFLLSFDPSTQQWSYAG-ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp H---HHHHHHHHHHHSSCGG-G--GCCCCEEEEEETTTTEEEEEE-ECSSCCCBSCEEEEETTEEEEECCEEETTEECCC
T ss_pred c---cchhhhhhhhcccccc-c--cCCcccEEEEeCCCCcEEECC-CCCCCCcccccEEEECCEEEEEeeecCCCcccCc
Confidence 0 00000000 000000 0 000137999999999999985 4554332336778889999999986533233445
Q ss_pred EEEEe--CCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCC--------------------CceEEEEEC
Q 038464 313 VWRFD--QDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAE--------------------LFSYVLCDL 370 (404)
Q Consensus 313 vw~l~--~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~--------------------~~~~~~yd~ 370 (404)
+|.++ +.+++|+++..+|.+ ..+....++..++.|||+..... ...+.+||+
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~ 292 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSP------DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW 292 (357)
T ss_dssp EEEEECC---CEEEECCCSSTT------TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC
T ss_pred eEEEEecCCCCcEEecCCCCCC------cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec
Confidence 66665 478899999988632 11223345667889987643111 136789999
Q ss_pred CCCceEECCCCC
Q 038464 371 VTNEWVELPKCS 382 (404)
Q Consensus 371 ~~~~w~~~~~~~ 382 (404)
++++|+.++.+|
T Consensus 293 ~~~~W~~~~~~p 304 (357)
T 2uvk_A 293 HNGKWDKSGELS 304 (357)
T ss_dssp C---CEEEEECS
T ss_pred CCCceeeCCCCC
Confidence 999999998776
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.80 E-value=3.8e-18 Score=156.54 Aligned_cols=215 Identities=14% Similarity=0.104 Sum_probs=153.8
Q ss_pred EEecCceEEEEeC-----CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecc----cC---c
Q 038464 110 VAASGGLVCFRTA-----SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGE----LP---K 177 (404)
Q Consensus 110 ~~s~~Glv~~~~~-----~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~----~~---~ 177 (404)
....++.|++.++ .+.+++|||.+++|..+++++. .+..++++.+ +.+|+++||. .. .
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~ 89 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQV---PRSGLAGCVV-------GGLLYAVGGRNNSPDGNTDS 89 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSS---CCBSCEEEEE-------TTEEEEECCEEEETTEEEEC
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCc---ccccceEEEE-------CCEEEEECCCcCCCCCCeec
Confidence 3445666776665 4579999999999999999884 4445555554 3678999875 21 2
Q ss_pred eEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEE
Q 038464 178 LSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYF 256 (404)
Q Consensus 178 ~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 256 (404)
..+++||+.+++|+.++. +|. +..+ ..+.++|++|++||.....
T Consensus 90 ~~~~~~d~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~--------------------------- 134 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAP-MSVPRNRI-------GVGVIDGHIYAVGGSHGCI--------------------------- 134 (308)
T ss_dssp CCEEEEETTTTEEEECCC-CSSCCBTC-------EEEEETTEEEEECCEETTE---------------------------
T ss_pred ceEEEECCCCCeEeECCC-CCcCcccc-------EEEEECCEEEEEcCCCCCc---------------------------
Confidence 469999999999999987 664 2222 3467899999998742100
Q ss_pred eccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHH
Q 038464 257 LNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHE 336 (404)
Q Consensus 257 ~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~ 336 (404)
..+.+..||+.+++|+.++ ++|... ..+..+..+++||++++.... ...-++|.+|..+++|+++..||..
T Consensus 135 --~~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~---- 205 (308)
T 1zgk_A 135 --HHNSVERYEPERDEWHLVA-PMLTRR-IGVGVAVLNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTI---- 205 (308)
T ss_dssp --ECCCEEEEETTTTEEEECC-CCSSCC-BSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSC----
T ss_pred --ccccEEEECCCCCeEeECC-CCCccc-cceEEEEECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCc----
Confidence 0126899999999999985 355433 345667789999999986422 2245588889988999999988732
Q ss_pred hccCcceEEEEecCCEEEEEEecCC---CceEEEEECCCCceEECCCCC
Q 038464 337 FYGKKVDINCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 337 ~~~~~~~~~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~~~~ 382 (404)
+....++..++.|||+..... ...+.+||+++++|+.++++|
T Consensus 206 ----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 206 ----RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp ----CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS
T ss_pred ----cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC
Confidence 223344556899987643221 367999999999999998876
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.80 E-value=5.6e-18 Score=154.91 Aligned_cols=213 Identities=12% Similarity=0.092 Sum_probs=152.7
Q ss_pred cCceEEEEeC-----CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccC---ceEEEEEe
Q 038464 113 SGGLVCFRTA-----SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELP---KLSFKVYN 184 (404)
Q Consensus 113 ~~Glv~~~~~-----~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~---~~~~~vy~ 184 (404)
.++.|++.++ .+.+++|||.+++|..+++++. .+..++++.+ +.+|+++||... ...+++||
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~~d 83 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPS---RRCRAGMVYM-------AGLVFAVGGFNGSLRVRTVDSYD 83 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSS---CCBSCEEEEE-------TTEEEEESCBCSSSBCCCEEEEE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCc---ccccceEEEE-------CCEEEEEeCcCCCccccceEEEC
Confidence 3455666654 3578999999999999998884 4445565554 467899987532 35799999
Q ss_pred CCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeE
Q 038464 185 SCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTI 263 (404)
Q Consensus 185 ~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i 263 (404)
+.+++|+.++. +|. +..+ ..+.++|.+|++||...... .+.+
T Consensus 84 ~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~~-----------------------------~~~~ 126 (302)
T 2xn4_A 84 PVKDQWTSVAN-MRDRRSTL-------GAAVLNGLLYAVGGFDGSTG-----------------------------LSSV 126 (302)
T ss_dssp TTTTEEEEECC-CSSCCBSC-------EEEEETTEEEEEEEECSSCE-----------------------------EEEE
T ss_pred CCCCceeeCCC-CCccccce-------EEEEECCEEEEEcCCCCCcc-----------------------------CceE
Confidence 99999999987 665 2222 34678999999988532100 1268
Q ss_pred EEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccc-eeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcc
Q 038464 264 VACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLE-SASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKV 342 (404)
Q Consensus 264 ~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~-~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~ 342 (404)
..||+.+++|+.++ ++|... ..+..+.++|+||++++..... ...-++|.+|..+++|+++..+|.. +.
T Consensus 127 ~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--------r~ 196 (302)
T 2xn4_A 127 EAYNIKSNEWFHVA-PMNTRR-SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR--------RS 196 (302)
T ss_dssp EEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC--------CB
T ss_pred EEEeCCCCeEeecC-CCCCcc-cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc--------cc
Confidence 99999999999985 355433 3456778899999999875321 2244588889988999999988732 22
Q ss_pred eEEEEecCCEEEEEEecCC---CceEEEEECCCCceEECCCCC
Q 038464 343 DINCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 343 ~~~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~~~~ 382 (404)
...++..++.|||+..... ...+.+||+++++|+.++.+|
T Consensus 197 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 239 (302)
T 2xn4_A 197 GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN 239 (302)
T ss_dssp SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC
Confidence 3345566899987643221 357999999999999998876
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.79 E-value=1.7e-17 Score=151.64 Aligned_cols=212 Identities=11% Similarity=0.118 Sum_probs=152.4
Q ss_pred cCceEEEEeC-------CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccC---ceEEEE
Q 038464 113 SGGLVCFRTA-------SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELP---KLSFKV 182 (404)
Q Consensus 113 ~~Glv~~~~~-------~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~---~~~~~v 182 (404)
.+|.+++.++ .+.+++|||.+++|..+++++. .+..++++.+ +.+|+++||... ...+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~-------~~~l~v~GG~~~~~~~~~~~~ 82 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR---KRRYVASVSL-------HDRIYVIGGYDGRSRLSSVEC 82 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS---CCBSCEEEEE-------TTEEEEECCBCSSCBCCCEEE
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh---hhccccEEEE-------CCEEEEEcCCCCCccCceEEE
Confidence 4555665554 3578999999999999998884 4445555554 357899987532 357999
Q ss_pred EeCCCCc---eeeccccccc-ccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEec
Q 038464 183 YNSCLNC---WEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLN 258 (404)
Q Consensus 183 y~~~~~~---W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 258 (404)
||+.+++ |+.++. +|. +..+ ..+.++|++|+++|.....
T Consensus 83 ~d~~~~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~lyv~GG~~~~~----------------------------- 125 (301)
T 2vpj_A 83 LDYTADEDGVWYSVAP-MNVRRGLA-------GATTLGDMIYVSGGFDGSR----------------------------- 125 (301)
T ss_dssp EETTCCTTCCCEEECC-CSSCCBSC-------EEEEETTEEEEECCBCSSC-----------------------------
T ss_pred EECCCCCCCeeEECCC-CCCCccce-------eEEEECCEEEEEcccCCCc-----------------------------
Confidence 9999999 999987 665 2222 3567899999998853200
Q ss_pred cCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhc
Q 038464 259 SCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFY 338 (404)
Q Consensus 259 ~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~ 338 (404)
..+.+..||+.+++|+.++ ++|... ..+..+..+|+||++++.+. ....-++|.+|..+++|+++..+|..
T Consensus 126 ~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~------ 196 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLG-DMQTAR-EGAGLVVASGVIYCLGGYDG-LNILNSVEKYDPHTGHWTNVTPMATK------ 196 (301)
T ss_dssp BCCEEEEEETTTTEEEEEE-ECSSCC-BSCEEEEETTEEEEECCBCS-SCBCCCEEEEETTTTEEEEECCCSSC------
T ss_pred ccceEEEEcCCCCeEEECC-CCCCCc-ccceEEEECCEEEEECCCCC-CcccceEEEEeCCCCcEEeCCCCCcc------
Confidence 0136899999999999985 355433 34567778999999998642 12344588889988899999988732
Q ss_pred cCcceEEEEecCCEEEEEEecCC---CceEEEEECCCCceEECCCCC
Q 038464 339 GKKVDINCVAAGHQIFICFNSAE---LFSYVLCDLVTNEWVELPKCS 382 (404)
Q Consensus 339 ~~~~~~~~~~~~~~i~v~~~~~~---~~~~~~yd~~~~~w~~~~~~~ 382 (404)
+....++..++.|||+..... ...+.+||+++++|+.++.+|
T Consensus 197 --r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 197 --RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp --CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred --cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 223345566889987643221 357999999999999998876
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.76 E-value=6.8e-17 Score=148.67 Aligned_cols=197 Identities=12% Similarity=0.151 Sum_probs=146.2
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC---------CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEE
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA---------SGKFIVSNPVTGSSRELPPLDADTENQSLHAIV 155 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~---------~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~ 155 (404)
...||+.+++|..++..+.++....++..+|.+++.++ .+.+++|||.|++|..+++++. .+..++++
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~ 145 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY---VVYGHTVL 145 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS---CCBSCEEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC---cccceeEE
Confidence 45899999999998776655555557778999998876 2468999999999999999884 45556555
Q ss_pred EEecCCCCCceEEEEEecc-cC---ceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceee
Q 038464 156 MTTSSKNPSNYKLVLVYGE-LP---KLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVA 230 (404)
Q Consensus 156 ~~g~~~~~~~~kv~~~~g~-~~---~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~ 230 (404)
.+ +.+|+++||. .. ...+++||+.+++|+.++. +|. +..+ ..+.++|++|++||...-..
T Consensus 146 ~~-------~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~~ 210 (315)
T 4asc_A 146 SH-------MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLF-------GATVHDGRIIVAAGVTDTGL 210 (315)
T ss_dssp EE-------TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSC-------EEEEETTEEEEEEEECSSSE
T ss_pred EE-------CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhce-------EEEEECCEEEEEeccCCCCc
Confidence 54 4579999876 21 3579999999999999987 664 2222 35778999999988532100
Q ss_pred ecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeecc----
Q 038464 231 TNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFL---- 306 (404)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~---- 306 (404)
.+.+..||+++++|+.++. +|... ..+.++..+|+||++++....
T Consensus 211 -----------------------------~~~~~~yd~~~~~W~~~~~-~p~~r-~~~~~~~~~~~l~v~GG~~~~~~~~ 259 (315)
T 4asc_A 211 -----------------------------TSSAEVYSITDNKWAPFEA-FPQER-SSLSLVSLVGTLYAIGGFATLETES 259 (315)
T ss_dssp -----------------------------EEEEEEEETTTTEEEEECC-CSSCC-BSCEEEEETTEEEEEEEEEEEECTT
T ss_pred -----------------------------cceEEEEECCCCeEEECCC-CCCcc-cceeEEEECCEEEEECCccccCcCC
Confidence 1268999999999999853 55433 346678889999999987421
Q ss_pred c----eeeEEEEEEeCCCCCeEEeccCC
Q 038464 307 E----SASLRVWRFDQDNGFWHQIAAMP 330 (404)
Q Consensus 307 ~----~~~~~vw~l~~~~~~W~~v~~~~ 330 (404)
. ...-+||.+|.++++|+++...|
T Consensus 260 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 260 GELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp SCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred ccccccccCcEEEecCCCChhhhhccCC
Confidence 0 23467999999999999995444
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.76 E-value=1.4e-17 Score=153.41 Aligned_cols=193 Identities=13% Similarity=0.191 Sum_probs=142.9
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeCC--------CeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEE
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTAS--------GKFIVSNPVTGSSRELPPLDADTENQSLHAIVM 156 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~~--------~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~ 156 (404)
...||+.+++|..++..+.++....++..+|.+++.++. +.+++|||.+++|..+++++. .+..++++.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~ 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI---KVYGHNVIS 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS---CEESCEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC---cccccEEEE
Confidence 457999999999997666555556677789999988761 468999999999999998884 444455554
Q ss_pred EecCCCCCceEEEEEeccc----CceEEEEEeCCCCceeeccccccc-ccccccccccCCccccCCeEEEeecCCceeee
Q 038464 157 TTSSKNPSNYKLVLVYGEL----PKLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDDEDAVYFLSKAGNVVAT 231 (404)
Q Consensus 157 ~g~~~~~~~~kv~~~~g~~----~~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~ 231 (404)
. +.+|+++||.. ....+++||+.+++|+.++. +|. +..+ ..+.++|.+|++||...-..
T Consensus 157 ~-------~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~-------~~~~~~~~iyv~GG~~~~~~- 220 (318)
T 2woz_A 157 H-------NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMF-------GVAIHKGKIVIAGGVTEDGL- 220 (318)
T ss_dssp E-------TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC-CSSCCBSC-------EEEEETTEEEEEEEEETTEE-
T ss_pred E-------CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC-CCCCcccc-------eEEEECCEEEEEcCcCCCCc-
Confidence 4 46899998752 13579999999999999987 554 2222 34778999999987421000
Q ss_pred cccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeecc-----
Q 038464 232 NMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFL----- 306 (404)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~----- 306 (404)
.+.+..||+++++|+.++ ++|... ..+.++..+|+||+++|....
T Consensus 221 ----------------------------~~~~~~yd~~~~~W~~~~-~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~ 270 (318)
T 2woz_A 221 ----------------------------SASVEAFDLKTNKWEVMT-EFPQER-SSISLVSLAGSLYAIGGFAMIQLESK 270 (318)
T ss_dssp ----------------------------EEEEEEEETTTCCEEECC-CCSSCC-BSCEEEEETTEEEEECCBCCBC----
T ss_pred ----------------------------cceEEEEECCCCeEEECC-CCCCcc-cceEEEEECCEEEEECCeeccCCCCc
Confidence 126889999999999985 355433 346778899999999986421
Q ss_pred ---ceeeEEEEEEeCCCCCeEEe
Q 038464 307 ---ESASLRVWRFDQDNGFWHQI 326 (404)
Q Consensus 307 ---~~~~~~vw~l~~~~~~W~~v 326 (404)
....-++|.+|..+++|+++
T Consensus 271 ~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 271 EFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCBCCBCCCEEEEETTTTEEEEE
T ss_pred eeccceeeeEEEEeCCCCEehhh
Confidence 12245799999999999999
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.66 E-value=3.4e-15 Score=151.10 Aligned_cols=248 Identities=9% Similarity=0.027 Sum_probs=160.5
Q ss_pred eeeeecCCCceeeccCCCCCCCee---EEEecCceEEEEeC--CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEec
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSI---PVAASGGLVCFRTA--SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTS 159 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~---~~~s~~Glv~~~~~--~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~ 159 (404)
...||+.+++|..++..+.++..+ .....+|.|++.++ ...+.+|||.|++|..+++|+. .|..++++.+.
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~---~R~~~s~~~~~- 296 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQV---ARGYQSSATMS- 296 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSS---CCSSCEEEECT-
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCc---cccccceEEec-
Confidence 458999999999876543322211 23346899999887 4579999999999999999984 45556555542
Q ss_pred CCCCCceEEEEEecc-c---CceEEEEEeCCCCceeecccc----cccccccccccccCCccccCCeEEEeecCCceeee
Q 038464 160 SKNPSNYKLVLVYGE-L---PKLSFKVYNSCLNCWEEETLL----LSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVAT 231 (404)
Q Consensus 160 ~~~~~~~kv~~~~g~-~---~~~~~~vy~~~~~~W~~~~~~----~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~ 231 (404)
+.||+++||. . ....+++||+.+++|+.++.. ++.. .+ ...+..++.+|++++..+.+.
T Consensus 297 -----dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~------~~~~~~~~~iyv~Gg~~g~~~- 363 (656)
T 1k3i_A 297 -----DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DK------QGLYRSDNHAWLFGWKKGSVF- 363 (656)
T ss_dssp -----TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CT------TGGGTTTCSCCEEECGGGCEE-
T ss_pred -----CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc-cc------cceeecCCceEEEECCCCcEE-
Confidence 4679999883 2 135799999999999987431 2221 11 123568999999987532110
Q ss_pred cccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeeccccCCc------cccccceeE---eeCCeEEEEEe
Q 038464 232 NMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLLPV------FSEYSIDVV---ECRGELLVVVL 302 (404)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~------~~~~~~~lv---~~~g~L~~v~~ 302 (404)
.......+..||++++.|.......+. .. .....+ ..+|+||++++
T Consensus 364 ------------------------~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~-~~~~av~~~~~~~~i~v~GG 418 (656)
T 1k3i_A 364 ------------------------QAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDA-MCGNAVMYDAVKGKILTFGG 418 (656)
T ss_dssp ------------------------ECCSSSEEEEEECSTTCEEEEEEECEETTEECCCC-BTCEEEEEETTTTEEEEECC
T ss_pred ------------------------EecCccceeeeecCCcceeecCCccccccccCCCC-CCCceEeccCCCCeEEEEeC
Confidence 001124799999999998753211111 01 111222 35899999998
Q ss_pred eecc-----ceeeEEEEEEeCCCCCeEEec--cCChhHHHHhccCcceEEEE-ecCCEEEEEEecC---------CCceE
Q 038464 303 SEFL-----ESASLRVWRFDQDNGFWHQIA--AMPPAMSHEFYGKKVDINCV-AAGHQIFICFNSA---------ELFSY 365 (404)
Q Consensus 303 ~~~~-----~~~~~~vw~l~~~~~~W~~v~--~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~~~~~---------~~~~~ 365 (404)
.... ......|+.+++.++.|.++. .||.. +....++ ..+++|||+.... ....+
T Consensus 419 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~--------R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v 490 (656)
T 1k3i_A 419 SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA--------RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTP 490 (656)
T ss_dssp BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC--------CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCC
T ss_pred CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC--------cccCCeEECCCCCEEEECCcccCcCcCCCCcccce
Confidence 5311 112235777788888999987 77732 2222333 3488888754321 12578
Q ss_pred EEEECCCCceEECCCCC
Q 038464 366 VLCDLVTNEWVELPKCS 382 (404)
Q Consensus 366 ~~yd~~~~~w~~~~~~~ 382 (404)
++||+++++|+.++.++
T Consensus 491 ~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 491 EIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp EEEEGGGTEEEECCCCS
T ss_pred EEEcCCCCceeecCCCC
Confidence 99999999999998776
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.65 E-value=7.2e-15 Score=149.12 Aligned_cols=217 Identities=12% Similarity=0.080 Sum_probs=146.5
Q ss_pred EEecCceEEEEeC-----CCeEEEEcCCCCCeeeCC-CCC--CCCCCCceeEEEEEecCCCCCceEEEEEecccC----c
Q 038464 110 VAASGGLVCFRTA-----SGKFIVSNPVTGSSRELP-PLD--ADTENQSLHAIVMTTSSKNPSNYKLVLVYGELP----K 177 (404)
Q Consensus 110 ~~s~~Glv~~~~~-----~~~~~v~NP~t~~w~~lP-~~~--~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~----~ 177 (404)
+++.++.|++.++ .+.+++|||.+++|..++ +++ ..+..+..++++.+.. +.+||++||... .
T Consensus 393 ~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-----~~~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 393 VDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-----NNQLLLIGGRKAPHQGL 467 (695)
T ss_dssp EEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-----TTEEEEECCBSSTTCBC
T ss_pred EEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-----CCEEEEEcCCCCCCCcc
Confidence 4557888888876 357999999999999998 522 0113455666666510 356999987532 3
Q ss_pred eEEEEEeCCCCceeeccccccc-ccccccccccCCccc-cCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEE
Q 038464 178 LSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHD-DEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVY 255 (404)
Q Consensus 178 ~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~-~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 255 (404)
..+++||+.+++|+.++. +|. +..+ ..+. .+|++|++||....
T Consensus 468 ~dv~~yd~~t~~W~~~~~-~p~~R~~h-------~~~~~~~~~iyv~GG~~~~--------------------------- 512 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKS-LSHTRFRH-------SACSLPDGNVLILGGVTEG--------------------------- 512 (695)
T ss_dssp CCCEEEETTTTEEEECCC-CSBCCBSC-------EEEECTTSCEEEECCBCSS---------------------------
T ss_pred ccEEEEeCCCCcEEECCC-CCCCcccc-------eEEEEcCCEEEEECCCCCC---------------------------
Confidence 579999999999999987 665 2222 2345 49999999885310
Q ss_pred EeccCCeEEEEecCCCceeeccc--cCCccccccceeEeeC---CeEEEEEeeeccc-eeeEEEEEEeCCCCC------e
Q 038464 256 FLNSCGTIVACNLTQKSFTEYPR--LLPVFSEYSIDVVECR---GELLVVVLSEFLE-SASLRVWRFDQDNGF------W 323 (404)
Q Consensus 256 ~~~~~~~i~~fD~~~~~w~~i~~--~~p~~~~~~~~lv~~~---g~L~~v~~~~~~~-~~~~~vw~l~~~~~~------W 323 (404)
..+..||+++++|+.+.. .+|... ..+..+.++ |+||++||..... ...-++|.++..+++ |
T Consensus 513 -----~~v~~yd~~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W 586 (695)
T 2zwa_A 513 -----PAMLLYNVTEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITV 586 (695)
T ss_dssp -----CSEEEEETTTTEEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEE
T ss_pred -----CCEEEEECCCCceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEE
Confidence 048899999999999853 134322 234434445 8999999874222 334568888887777 8
Q ss_pred EEeccCChhHHHHhccCcceEEEEecC-CEEEEEEecC------CCceEEEEECCCCceEECC
Q 038464 324 HQIAAMPPAMSHEFYGKKVDINCVAAG-HQIFICFNSA------ELFSYVLCDLVTNEWVELP 379 (404)
Q Consensus 324 ~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~~~------~~~~~~~yd~~~~~w~~~~ 379 (404)
+++..+|. ..+....++..+ +.|||+++.. ....+.+||+++++|+.++
T Consensus 587 ~~~~~~p~-------~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 587 IKKLQHPL-------FQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp EEEEECGG-------GCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred EEcCCCCC-------CCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 99987642 112223344455 8998764321 2467999999999999654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.61 E-value=2.4e-14 Score=145.35 Aligned_cols=204 Identities=8% Similarity=0.009 Sum_probs=139.2
Q ss_pred ceeeeecCCCceeecc-C-----CCCCCCeeEEEec--CceEEEEeC-------CCeEEEEcCCCCCeeeCCCCCCCCCC
Q 038464 84 HSIVFDSAEKTWKELN-F-----PNSSPDSIPVAAS--GGLVCFRTA-------SGKFIVSNPVTGSSRELPPLDADTEN 148 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~-~-----p~~~~~~~~~~s~--~Glv~~~~~-------~~~~~v~NP~t~~w~~lP~~~~~~~~ 148 (404)
....||+.+++|..++ . .+.++..+.+++. +|.+|+.++ .+.+++||+.|++|..+++++. .
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~---~ 489 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH---T 489 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB---C
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC---C
Confidence 3568999999999887 2 1333445556677 999999886 2468999999999999999984 4
Q ss_pred CceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecccc--ccc-ccccccccccCCccccC---CeEEEe
Q 038464 149 QSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLL--LSR-KSEQALEVDSIDHHDDE---DAVYFL 222 (404)
Q Consensus 149 ~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~--~p~-~~~~~~~~~~~~~v~~~---G~ly~~ 222 (404)
+..++.+.+. +.+||++||......+++||+.++.|+.+... +|. +..+ .++.++ |++|++
T Consensus 490 R~~h~~~~~~------~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~-------~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 490 RFRHSACSLP------DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVS-------AGLEFDPVSKQGIIL 556 (695)
T ss_dssp CBSCEEEECT------TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBS-------CEEEEETTTTEEEEE
T ss_pred cccceEEEEc------CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccce-------eEEEEeCCCCEEEEE
Confidence 5556655532 46799998763322899999999999998751 332 2111 224445 889999
Q ss_pred ecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCc------eeeccccCCccccccceeEeeC-C
Q 038464 223 SKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKS------FTEYPRLLPVFSEYSIDVVECR-G 295 (404)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~------w~~i~~~~p~~~~~~~~lv~~~-g 295 (404)
||...-. .. ..+.+..||+.++. |+.+.. +|......+.++..+ |
T Consensus 557 GG~~~~~---------~~------------------~~~~v~~yd~~~~~w~~~~~W~~~~~-~p~~~R~~~~~~~~~~~ 608 (695)
T 2zwa_A 557 GGGFMDQ---------TT------------------VSDKAIIFKYDAENATEPITVIKKLQ-HPLFQRYGSQIKYITPR 608 (695)
T ss_dssp CCBCTTS---------SC------------------BCCEEEEEEECTTCSSCCEEEEEEEE-CGGGCCBSCEEEEEETT
T ss_pred CCcCCCC---------Ce------------------eeCcEEEEEccCCccccceEEEEcCC-CCCCCcccceEEEeCCC
Confidence 8752100 00 01369999999999 787743 222222345677788 9
Q ss_pred eEEEEEeeeccc--eeeEEEEEEeCCCCCeEEeccCChh
Q 038464 296 ELLVVVLSEFLE--SASLRVWRFDQDNGFWHQIAAMPPA 332 (404)
Q Consensus 296 ~L~~v~~~~~~~--~~~~~vw~l~~~~~~W~~v~~~~~~ 332 (404)
+||++||..... ...-+||.+|..+++|+.+ .+|..
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~ 646 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRR 646 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHH
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEEEe-ecccc
Confidence 999999864221 1234588889988999953 56644
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.53 E-value=7.7e-14 Score=141.17 Aligned_cols=249 Identities=12% Similarity=0.005 Sum_probs=151.5
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEEec--CceEEEEeCC------------CeEEEEcCCCCCeeeCCCCCCCCCCCc
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVAAS--GGLVCFRTAS------------GKFIVSNPVTGSSRELPPLDADTENQS 150 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~s~--~Glv~~~~~~------------~~~~v~NP~t~~w~~lP~~~~~~~~~~ 150 (404)
..+|||..++|..++..+.. ... .+.. +|.|++.++. ..+.+|||.|++|..++.++.++...
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~-~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~- 244 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAA-AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF- 244 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSE-EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS-
T ss_pred cccCCCCCCeeeeeccCCCC-cee-EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc-
Confidence 34789999999976443322 122 3333 8888888641 25899999999999999887432221
Q ss_pred eeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeeccccccc-ccccccccccCCcccc-CCeEEEeecCCce
Q 038464 151 LHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSR-KSEQALEVDSIDHHDD-EDAVYFLSKAGNV 228 (404)
Q Consensus 151 ~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~-~~~~~~~~~~~~~v~~-~G~ly~~~~~~~~ 228 (404)
.++.++.. +.+|+++||... ..+++||+.++.|+.++. ++. +.++ ..+.+ +|++|++||..+.
T Consensus 245 ~~~~~~~~------~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~~-~~~~R~~~-------s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 245 CPGISMDG------NGQIVVTGGNDA-KKTSLYDSSSDSWIPGPD-MQVARGYQ-------SSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp SCEEEECT------TSCEEEECSSST-TCEEEEEGGGTEEEECCC-CSSCCSSC-------EEEECTTSCEEEECCCCCS
T ss_pred cccccCCC------CCCEEEeCCCCC-CceEEecCcCCceeECCC-CCcccccc-------ceEEecCCeEEEEeCcccC
Confidence 12233322 567999987532 379999999999999987 664 3222 23566 9999999983110
Q ss_pred eeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceeecc----ccCCccccccceeEeeCCeEEEEEeee
Q 038464 229 VATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTEYP----RLLPVFSEYSIDVVECRGELLVVVLSE 304 (404)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~----~~~p~~~~~~~~lv~~~g~L~~v~~~~ 304 (404)
.. ..+.+..||+++++|..++ .+++... ...++..++++|++++.+
T Consensus 310 ----------~~------------------~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~--~~~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 310 ----------GV------------------FEKNGEVYSPSSKTWTSLPNAKVNPMLTAD--KQGLYRSDNHAWLFGWKK 359 (656)
T ss_dssp ----------SS------------------CCCCEEEEETTTTEEEEETTSCSGGGCCCC--TTGGGTTTCSCCEEECGG
T ss_pred ----------Cc------------------ccccceEeCCCCCcceeCCCcccccccccc--ccceeecCCceEEEECCC
Confidence 00 0126899999999999873 2333322 123455789999998753
Q ss_pred ccc---eeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE---ecCCEEEEEEecCC------Cc---eEEEEE
Q 038464 305 FLE---SASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV---AAGHQIFICFNSAE------LF---SYVLCD 369 (404)
Q Consensus 305 ~~~---~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~~~~~~------~~---~~~~yd 369 (404)
... ...-.++.++..++.|.+....... .+..........++ ..+++|||+..... .. .+.+||
T Consensus 360 g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~-~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd 438 (656)
T 1k3i_A 360 GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS-NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGE 438 (656)
T ss_dssp GCEEECCSSSEEEEEECSTTCEEEEEEECEE-TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCS
T ss_pred CcEEEecCccceeeeecCCcceeecCCcccc-ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCC
Confidence 110 1122467778877788754322110 00000000011122 35889987643211 12 688999
Q ss_pred CCCCceEECC--CCC
Q 038464 370 LVTNEWVELP--KCS 382 (404)
Q Consensus 370 ~~~~~w~~~~--~~~ 382 (404)
+.+++|..+. .+|
T Consensus 439 ~~~~~W~~~~~~~mp 453 (656)
T 1k3i_A 439 PGTSPNTVFASNGLY 453 (656)
T ss_dssp TTSCCEEEECTTCCS
T ss_pred CCCCCeeEEccCCCC
Confidence 9999999875 555
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.06 E-value=9.5e-11 Score=76.54 Aligned_cols=44 Identities=32% Similarity=0.562 Sum_probs=38.3
Q ss_pred cCCCcccChHHHHHHHHhcCChhhhhHhhhcchhhhhccCChhH
Q 038464 18 LSFSMEELNQDLLERVLSWLPTSTFFRLSSVCKRWKSVADSPSF 61 (404)
Q Consensus 18 ~~~~~~~LP~dll~~Il~rLp~~~l~r~~~Vck~W~~li~~~~F 61 (404)
++..|..||+|++.+||++||.+++.++++|||+|+.++.++.|
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 34678999999999999999999999999999999999998765
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.89 E-value=7.7e-10 Score=98.27 Aligned_cols=49 Identities=35% Similarity=0.499 Sum_probs=45.4
Q ss_pred CCCcccChHHHHHHHHhcCChhhhh-HhhhcchhhhhccCChhHHHHhhc
Q 038464 19 SFSMEELNQDLLERVLSWLPTSTFF-RLSSVCKRWKSVADSPSFKLACSQ 67 (404)
Q Consensus 19 ~~~~~~LP~dll~~Il~rLp~~~l~-r~~~Vck~W~~li~~~~F~~~~~~ 67 (404)
+..+..||+||+.+||++||.++|+ ||++|||+|+.+++++.|-+.+..
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 4578899999999999999999999 999999999999999999888764
No 21
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.73 E-value=0.00014 Score=69.12 Aligned_cols=45 Identities=20% Similarity=0.361 Sum_probs=40.4
Q ss_pred CCCcccChHHHHHHHHhcCChhhhhHhhhcchhhhhccCChhHHH
Q 038464 19 SFSMEELNQDLLERVLSWLPTSTFFRLSSVCKRWKSVADSPSFKL 63 (404)
Q Consensus 19 ~~~~~~LP~dll~~Il~rLp~~~l~r~~~Vck~W~~li~~~~F~~ 63 (404)
.+.+..||+|++..||+.|+.+++.++++|||.|+.++.++.+-+
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~ 60 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 60 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhh
Confidence 466889999999999999999999999999999999998875544
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.65 E-value=1.6e-05 Score=76.17 Aligned_cols=39 Identities=10% Similarity=0.281 Sum_probs=37.0
Q ss_pred CCcccChHHHHHHHHhcCChhhhhHhhhcchhhhhccCC
Q 038464 20 FSMEELNQDLLERVLSWLPTSTFFRLSSVCKRWKSVADS 58 (404)
Q Consensus 20 ~~~~~LP~dll~~Il~rLp~~~l~r~~~Vck~W~~li~~ 58 (404)
+.+..||+||+..||+.||.++|.+++.|||.|+.++.+
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 457889999999999999999999999999999999987
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.53 E-value=1.7e-06 Score=82.57 Aligned_cols=42 Identities=24% Similarity=0.430 Sum_probs=38.0
Q ss_pred CCcccChHH----HHHHHHhcCChhhhhHhhhcchhhhhccCChhH
Q 038464 20 FSMEELNQD----LLERVLSWLPTSTFFRLSSVCKRWKSVADSPSF 61 (404)
Q Consensus 20 ~~~~~LP~d----ll~~Il~rLp~~~l~r~~~Vck~W~~li~~~~F 61 (404)
+.+..||+| |+..||+.|+.++|.++++|||+|+.++.++.+
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGML 54 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHH
Confidence 567889999 999999999999999999999999999976543
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.75 E-value=1e-05 Score=71.04 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=41.9
Q ss_pred CCCcccChHHHHHHHHhcCChhhhhHhhhcchhhhhccCChhHHHHhh
Q 038464 19 SFSMEELNQDLLERVLSWLPTSTFFRLSSVCKRWKSVADSPSFKLACS 66 (404)
Q Consensus 19 ~~~~~~LP~dll~~Il~rLp~~~l~r~~~Vck~W~~li~~~~F~~~~~ 66 (404)
+..|..||+|++..||+.|++++++++.+|||+|+.+.+++..=+.+.
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l 49 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFL 49 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHH
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 345789999999999999999999999999999999999986544443
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.49 E-value=4.1e-05 Score=70.17 Aligned_cols=43 Identities=33% Similarity=0.559 Sum_probs=38.4
Q ss_pred cCCCcccChHHHHHHHHhcCChhhhhHhhhcchhhhhccCChh
Q 038464 18 LSFSMEELNQDLLERVLSWLPTSTFFRLSSVCKRWKSVADSPS 60 (404)
Q Consensus 18 ~~~~~~~LP~dll~~Il~rLp~~~l~r~~~Vck~W~~li~~~~ 60 (404)
+...|..||+|++..||.+|+.+++.+++.|||+|+.++.+|.
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 3567999999999999999999999999999999999987654
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.74 E-value=0.00052 Score=67.93 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=29.3
Q ss_pred CCcccChHHHHHHHHhcCC-hhhhhHhhhcchhhhhc
Q 038464 20 FSMEELNQDLLERVLSWLP-TSTFFRLSSVCKRWKSV 55 (404)
Q Consensus 20 ~~~~~LP~dll~~Il~rLp-~~~l~r~~~Vck~W~~l 55 (404)
+.|+.||+|++..||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 6789999999999999999 89999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.33 E-value=0.0052 Score=60.72 Aligned_cols=33 Identities=24% Similarity=0.520 Sum_probs=31.2
Q ss_pred ccChHHHHHHHHhcC-ChhhhhHhhhcchhhhhc
Q 038464 23 EELNQDLLERVLSWL-PTSTFFRLSSVCKRWKSV 55 (404)
Q Consensus 23 ~~LP~dll~~Il~rL-p~~~l~r~~~Vck~W~~l 55 (404)
..||+|++..||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 579999999999999 899999999999999877
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.05 E-value=2 Score=39.10 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=111.1
Q ss_pred EecCceEEEEeCCCeEEEEcCCCCC--eeeCCCCCCC-CC--CCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeC
Q 038464 111 AASGGLVCFRTASGKFIVSNPVTGS--SRELPPLDAD-TE--NQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNS 185 (404)
Q Consensus 111 ~s~~Glv~~~~~~~~~~v~NP~t~~--w~~lP~~~~~-~~--~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~ 185 (404)
...+|.|++......++.+|+.|++ |+.-...... .. .....+..... +.+|++... ...+..+|.
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~v~~~---~g~l~a~d~ 120 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS------GGHVYIGSE---KAQVYALNT 120 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE------TTEEEEEET---TSEEEEEET
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe------CCEEEEEcC---CCEEEEEEC
Confidence 3457888887666789999999987 4422211100 00 11111111111 345665432 246888898
Q ss_pred CCCc--eeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCcc-ccc-----------ceeeecCCc
Q 038464 186 CLNC--WEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSK-QYS-----------SVITSKDGE 251 (404)
Q Consensus 186 ~~~~--W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~ 251 (404)
++++ |+.... .... ..++..+|.+|+.+..+.+.++|...+... .+. ...... +
T Consensus 121 ~tG~~~W~~~~~---~~~~-------~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~ 188 (376)
T 3q7m_A 121 SDGTVAWQTKVA---GEAL-------SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F 188 (376)
T ss_dssp TTCCEEEEEECS---SCCC-------SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T
T ss_pred CCCCEEEEEeCC---CceE-------cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C
Confidence 7664 764322 1101 023455677766555555666665322110 000 111122 2
Q ss_pred eEEEEeccCCeEEEEecCCCc--eeeccccCCccc-------cccceeEeeCCeEEEEEeeeccceeeEEEEEEeC--CC
Q 038464 252 EIVYFLNSCGTIVACNLTQKS--FTEYPRLLPVFS-------EYSIDVVECRGELLVVVLSEFLESASLRVWRFDQ--DN 320 (404)
Q Consensus 252 ~~~y~~~~~~~i~~fD~~~~~--w~~i~~~~p~~~-------~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~--~~ 320 (404)
..+|+....+.+.+||.++.+ |..-. ..|... ......+..+|.+|+.... .. +..++. .+
T Consensus 189 ~~v~~g~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~-----g~--l~~~d~~tG~ 260 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVVVNGVVFALAYN-----GN--LTALDLRSGQ 260 (376)
T ss_dssp TEEEECCTTTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEEETTEEEEECTT-----SC--EEEEETTTCC
T ss_pred CEEEEEcCCCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEEECCEEEEEecC-----cE--EEEEECCCCc
Confidence 356776666789999997654 66421 111100 0112334557888775421 12 445554 34
Q ss_pred CCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCCCceEEEEECCCCc--eEE
Q 038464 321 GFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVTNE--WVE 377 (404)
Q Consensus 321 ~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~--w~~ 377 (404)
..|..-. +. . ...+..++.+|+. . ..+.+.++|.++++ |+.
T Consensus 261 ~~w~~~~--~~---------~--~~~~~~~~~l~~~-~--~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 261 IMWKREL--GS---------V--NDFIVDGNRIYLV-D--QNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp EEEEECC--CC---------E--EEEEEETTEEEEE-E--TTCCEEEEETTTCCEEEEE
T ss_pred EEeeccC--CC---------C--CCceEECCEEEEE-c--CCCeEEEEECCCCcEEEee
Confidence 4576532 10 0 1123457888764 2 24679999998875 654
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.74 E-value=2.4 Score=38.53 Aligned_cols=242 Identities=13% Similarity=0.124 Sum_probs=122.5
Q ss_pred CceeeeecCCC--ceeeccCCC--------CCCCeeEEEecCceEEEEeCCCeEEEEcCCCCC--eeeCCCCCCCCCCCc
Q 038464 83 NHSIVFDSAEK--TWKELNFPN--------SSPDSIPVAASGGLVCFRTASGKFIVSNPVTGS--SRELPPLDADTENQS 150 (404)
Q Consensus 83 ~~~~~~d~~~~--~w~~l~~p~--------~~~~~~~~~s~~Glv~~~~~~~~~~v~NP~t~~--w~~lP~~~~~~~~~~ 150 (404)
....++|..++ .|. .+.+. ........+..+|.+++......++.+|+.|++ |+.-..... ..
T Consensus 63 g~v~a~d~~tG~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~-- 137 (376)
T 3q7m_A 63 GLVKALNADDGKEIWS-VSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LS-- 137 (376)
T ss_dssp SEEEEEETTTCCEEEE-EECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CS--
T ss_pred CeEEEEEccCCceeee-ecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--Ec--
Confidence 45678898765 354 22211 111122345678888887767789999999987 543211110 00
Q ss_pred eeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc--eeecccccccccccccccccCCccccCCeEEEeecCCce
Q 038464 151 LHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC--WEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNV 228 (404)
Q Consensus 151 ~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~--W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~ 228 (404)
..+.. +.+|++... ...+..+|..+++ |+.... -+..... ....++..+|.+|+-...+.+
T Consensus 138 --~p~~~-------~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~~-~~~~~~~----~~~~~~~~~~~v~~g~~~g~l 200 (376)
T 3q7m_A 138 --RPVVS-------DGLVLIHTS---NGQLQALNEADGAVKWTVNLD-MPSLSLR----GESAPTTAFGAAVVGGDNGRV 200 (376)
T ss_dssp --CCEEE-------TTEEEEECT---TSEEEEEETTTCCEEEEEECC-C-----C----CCCCCEEETTEEEECCTTTEE
T ss_pred --CCEEE-------CCEEEEEcC---CCeEEEEECCCCcEEEEEeCC-CCceeec----CCCCcEEECCEEEEEcCCCEE
Confidence 11111 234554322 2468888887664 875443 1110000 001234456666654444555
Q ss_pred eeecccCCCcc-cc-----------------cceeeecCCceEEEEeccCCeEEEEecCCCc--eeeccccCCccccccc
Q 038464 229 VATNMQRSPSK-QY-----------------SSVITSKDGEEIVYFLNSCGTIVACNLTQKS--FTEYPRLLPVFSEYSI 288 (404)
Q Consensus 229 ~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~--w~~i~~~~p~~~~~~~ 288 (404)
.++|...+... .+ ....... +..+|+....+.+.++|.++.+ |..- .+. ..
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG~~~w~~~---~~~----~~ 271 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAYNGNLTALDLRSGQIMWKRE---LGS----VN 271 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECTTSCEEEEETTTCCEEEEEC---CCC----EE
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEecCcEEEEEECCCCcEEeecc---CCC----CC
Confidence 66665321110 00 0111111 3467777767789999997654 6532 111 12
Q ss_pred eeEeeCCeEEEEEeeeccceeeEEEEEEeC--CCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCCCceEE
Q 038464 289 DVVECRGELLVVVLSEFLESASLRVWRFDQ--DNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAELFSYV 366 (404)
Q Consensus 289 ~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~--~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 366 (404)
.++..+++||+.... .. ++.++. .+..|..-. ++. .....+ +..++.||+. + ..+.+.
T Consensus 272 ~~~~~~~~l~~~~~~-----g~--l~~~d~~tG~~~w~~~~-~~~-------~~~~~~--~~~~~~l~v~--~-~~g~l~ 331 (376)
T 3q7m_A 272 DFIVDGNRIYLVDQN-----DR--VMALTIDGGVTLWTQSD-LLH-------RLLTSP--VLYNGNLVVG--D-SEGYLH 331 (376)
T ss_dssp EEEEETTEEEEEETT-----CC--EEEEETTTCCEEEEECT-TTT-------SCCCCC--EEETTEEEEE--C-TTSEEE
T ss_pred CceEECCEEEEEcCC-----Ce--EEEEECCCCcEEEeecc-cCC-------CcccCC--EEECCEEEEE--e-CCCeEE
Confidence 345668888876532 12 555565 444576531 111 001111 1246778653 2 346799
Q ss_pred EEECCCCce
Q 038464 367 LCDLVTNEW 375 (404)
Q Consensus 367 ~yd~~~~~w 375 (404)
++|.++++.
T Consensus 332 ~~d~~tG~~ 340 (376)
T 3q7m_A 332 WINVEDGRF 340 (376)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999998763
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=94.47 E-value=2.5 Score=37.70 Aligned_cols=234 Identities=10% Similarity=-0.005 Sum_probs=113.7
Q ss_pred ceeeeecCCCce-eeccCCCCCCCeeEEEecCceEEEEe-CCCeEEEEcCCCCCee-eCCCCCCCCCCCceeEEEEEecC
Q 038464 84 HSIVFDSAEKTW-KELNFPNSSPDSIPVAASGGLVCFRT-ASGKFIVSNPVTGSSR-ELPPLDADTENQSLHAIVMTTSS 160 (404)
Q Consensus 84 ~~~~~d~~~~~w-~~l~~p~~~~~~~~~~s~~Glv~~~~-~~~~~~v~NP~t~~w~-~lP~~~~~~~~~~~~~~~~~g~~ 160 (404)
....+|+.+.+. .+++....+ .....+.+|.+++.. ....+.++|+.|++.. .++............++++-
T Consensus 65 ~v~viD~~t~~~~~~i~~~~~p--~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--- 139 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGFTSP--RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--- 139 (328)
T ss_dssp EEEEEETTTCCEEEEEECCSSE--EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE---
T ss_pred EEEEEECcccEEEEEcCCCCCC--cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE---
Confidence 345788877654 345432222 222333678888887 4788999999998754 23321100000011233331
Q ss_pred CCCCceEEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCccc
Q 038464 161 KNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQ 240 (404)
Q Consensus 161 ~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~ 240 (404)
+.++++.... ....+.++|..+++....-. ....+.. -.+.-+|.+|+.+.... +. ..
T Consensus 140 ----~~~lyv~~~~-~~~~v~viD~~t~~~~~~i~-~g~~p~~-------i~~~~dG~l~v~~~~~~----~~-----~~ 197 (328)
T 3dsm_A 140 ----GKYVYVNCWS-YQNRILKIDTETDKVVDELT-IGIQPTS-------LVMDKYNKMWTITDGGY----EG-----SP 197 (328)
T ss_dssp ----TTEEEEEECT-TCCEEEEEETTTTEEEEEEE-CSSCBCC-------CEECTTSEEEEEBCCBC----TT-----CS
T ss_pred ----CCEEEEEcCC-CCCEEEEEECCCCeEEEEEE-cCCCccc-------eEEcCCCCEEEEECCCc----cC-----Cc
Confidence 3567766321 13579999999887543222 1111111 12334688776543210 00 00
Q ss_pred ccceeeecCCceEEEEeccCCeEEEEecCCCceee-ccccCCccccccceeEee--CCeEEEEEeeeccceeeEEEEEEe
Q 038464 241 YSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTE-YPRLLPVFSEYSIDVVEC--RGELLVVVLSEFLESASLRVWRFD 317 (404)
Q Consensus 241 ~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~-i~~~~p~~~~~~~~lv~~--~g~L~~v~~~~~~~~~~~~vw~l~ 317 (404)
|.. ..+.|..+|+++.+... +. .+... .-..++.. ++.||+... .||.+|
T Consensus 198 ~~~---------------~~~~v~~id~~t~~v~~~~~--~~~g~-~p~~la~~~d~~~lyv~~~---------~v~~~d 250 (328)
T 3dsm_A 198 YGY---------------EAPSLYRIDAETFTVEKQFK--FKLGD-WPSEVQLNGTRDTLYWINN---------DIWRMP 250 (328)
T ss_dssp SCB---------------CCCEEEEEETTTTEEEEEEE--CCTTC-CCEEEEECTTSCEEEEESS---------SEEEEE
T ss_pred ccc---------------CCceEEEEECCCCeEEEEEe--cCCCC-CceeEEEecCCCEEEEEcc---------EEEEEE
Confidence 000 01368889998876542 22 22111 11234444 456666421 477888
Q ss_pred CCCCCeEEeccCChhHHHHhccCcceEEEEe-cCCEEEEEEec--CCCceEEEEECCCCceEE
Q 038464 318 QDNGFWHQIAAMPPAMSHEFYGKKVDINCVA-AGHQIFICFNS--AELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 318 ~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~~~~--~~~~~~~~yd~~~~~w~~ 377 (404)
..+.+......++.. +....-.++. .++.+|+.-.. ...+.+.+||++.+.-..
T Consensus 251 ~~t~~~~~~~~~~~~------~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 251 VEADRVPVRPFLEFR------DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp TTCSSCCSSCSBCCC------SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred CCCCceeeeeeecCC------CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 765443221112210 0111112233 37888875311 235789999998433333
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.37 E-value=2.7 Score=37.61 Aligned_cols=67 Identities=7% Similarity=0.189 Sum_probs=39.4
Q ss_pred CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE--ecC---CEEEEEEecCCCceEEEE
Q 038464 294 RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV--AAG---HQIFICFNSAELFSYVLC 368 (404)
Q Consensus 294 ~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~v~~~~~~~~~~~~y 368 (404)
++.+++++..+ ..+.+|.+......|..+..+. +....+.++ ..+ +..++... ..+.+.+|
T Consensus 171 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~--------~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iw 236 (379)
T 3jrp_A 171 ESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLE--------GHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIW 236 (379)
T ss_dssp TTCEEEEEETT----SCEEEEEEETTTTEEEEEEEEC--------CCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEE
T ss_pred CCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEe--------cccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEE
Confidence 46766666543 5788999987666677666554 222223333 233 45543332 35678899
Q ss_pred ECCCCc
Q 038464 369 DLVTNE 374 (404)
Q Consensus 369 d~~~~~ 374 (404)
|++++.
T Consensus 237 d~~~~~ 242 (379)
T 3jrp_A 237 TQDNEQ 242 (379)
T ss_dssp EESSTT
T ss_pred eCCCCC
Confidence 998863
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.36 E-value=2.9 Score=37.89 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=50.6
Q ss_pred EEEcCCCCceeeeecCCCcee-eccCCCCCCCeeEEEecCc-eEEEEe-CCCeEEEEcCCCCCeeeCCCCCCCCCCCcee
Q 038464 76 LMVDHQLNHSIVFDSAEKTWK-ELNFPNSSPDSIPVAASGG-LVCFRT-ASGKFIVSNPVTGSSRELPPLDADTENQSLH 152 (404)
Q Consensus 76 ~~~~~~~~~~~~~d~~~~~w~-~l~~p~~~~~~~~~~s~~G-lv~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~ 152 (404)
++....+.....+|..+++.. .++.... ......+.+| .+++.+ ....+.+||+.+++....-..+ . ...
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~----~-~v~ 77 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG----S-SPQ 77 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS----S-SEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC----C-Ccc
Confidence 333334444557777655433 2222111 1121223344 565555 3678999999998765433222 1 122
Q ss_pred EEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 153 AIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 153 ~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
++++ .+ +.-.+++.+.. ...+.+||..++.-
T Consensus 78 ~~~~---sp--dg~~l~~~~~~--~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 78 GVAV---SP--DGKQVYVTNMA--SSTLSVIDTTSNTV 108 (391)
T ss_dssp EEEE---CT--TSSEEEEEETT--TTEEEEEETTTTEE
T ss_pred ceEE---CC--CCCEEEEEECC--CCEEEEEECCCCeE
Confidence 3322 22 22345444322 35799999988754
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.73 E-value=3.6 Score=36.70 Aligned_cols=223 Identities=8% Similarity=-0.023 Sum_probs=114.2
Q ss_pred ceeeeecCCCceee-cc-----CCCCCCCeeEEEecCceEEEEeC-CCeEEEEcCCCCCe-eeCCCCCCCCCCCceeEEE
Q 038464 84 HSIVFDSAEKTWKE-LN-----FPNSSPDSIPVAASGGLVCFRTA-SGKFIVSNPVTGSS-RELPPLDADTENQSLHAIV 155 (404)
Q Consensus 84 ~~~~~d~~~~~w~~-l~-----~p~~~~~~~~~~s~~Glv~~~~~-~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~ 155 (404)
....+|+.+++... +. .+.+.. ...++..++.+++... .+.+.++|+.|++. ..++... . ...++
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~-~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~-----~-p~~i~ 90 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDV-AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT-----S-PRYIH 90 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSC-EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS-----S-EEEEE
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCcc-ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC-----C-CcEEE
Confidence 45578988776553 11 111111 1224556788888765 67899999999886 4564322 1 12343
Q ss_pred EEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecccccccccc-cccccccCCccccCCeEEEeecCCceeeeccc
Q 038464 156 MTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSE-QALEVDSIDHHDDEDAVYFLSKAGNVVATNMQ 234 (404)
Q Consensus 156 ~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~-~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~ 234 (404)
+.. +.++++.... ...+.++|..+++-...-. .+.... ...|. ..+..+|.+|+....
T Consensus 91 ~~~------~g~lyv~~~~--~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~---~i~~~~~~lyv~~~~--------- 149 (328)
T 3dsm_A 91 FLS------DEKAYVTQIW--DYRIFIINPKTYEITGYIE-CPDMDMESGSTE---QMVQYGKYVYVNCWS--------- 149 (328)
T ss_dssp EEE------TTEEEEEEBS--CSEEEEEETTTTEEEEEEE-CTTCCTTTCBCC---CEEEETTEEEEEECT---------
T ss_pred EeC------CCeEEEEECC--CCeEEEEECCCCeEEEEEE-cCCccccCCCcc---eEEEECCEEEEEcCC---------
Confidence 311 2377776421 3578999998876432111 111000 00011 123345566654321
Q ss_pred CCCcccccceeeecCCceEEEEeccCCeEEEEecCCCceee-ccccCCccccccceeEe-eCCeEEEEEeeeccce----
Q 038464 235 RSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKSFTE-YPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLES---- 308 (404)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~w~~-i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~---- 308 (404)
..+.|..+|+++.+... ++. ... -..++. -+|+++++........
T Consensus 150 ------------------------~~~~v~viD~~t~~~~~~i~~--g~~---p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 150 ------------------------YQNRILKIDTETDKVVDELTI--GIQ---PTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp ------------------------TCCEEEEEETTTTEEEEEEEC--SSC---BCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred ------------------------CCCEEEEEECCCCeEEEEEEc--CCC---ccceEEcCCCCEEEEECCCccCCcccc
Confidence 01268889998876543 221 110 112333 3689887764321000
Q ss_pred eeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEe-cCCEEEEEEecCCCceEEEEECCCCce
Q 038464 309 ASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVA-AGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 309 ~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
..-.|+++|..+.+..+.-.++. +....-.++. .++.+|+. .. .+.++|+++++.
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~-------g~~p~~la~~~d~~~lyv~--~~---~v~~~d~~t~~~ 256 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKL-------GDWPSEVQLNGTRDTLYWI--NN---DIWRMPVEADRV 256 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCT-------TCCCEEEEECTTSCEEEEE--SS---SEEEEETTCSSC
T ss_pred CCceEEEEECCCCeEEEEEecCC-------CCCceeEEEecCCCEEEEE--cc---EEEEEECCCCce
Confidence 02357777887666554444442 1111112333 46777753 21 788999988775
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.42 E-value=1.4 Score=38.09 Aligned_cols=174 Identities=10% Similarity=0.008 Sum_probs=90.6
Q ss_pred EEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceee
Q 038464 167 KLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVIT 246 (404)
Q Consensus 167 kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (404)
.+|...|......+.++|.++++=..... ++... |. .+.+..++.+|.++...
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~-----Fg-eGit~~g~~ly~ltw~~-------------------- 106 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRY-----FG-EGISDWKDKIVGLTWKN-------------------- 106 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTC-----CE-EEEEEETTEEEEEESSS--------------------
T ss_pred EEEEECCCCCCceEEEEECCCCcEEEEEe-cCCcc-----ce-eEEEEeCCEEEEEEeeC--------------------
Confidence 57766565455789999999886432222 32211 10 01234566777765432
Q ss_pred ecCCceEEEEeccCCeEEEEecCCCcee-eccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEE
Q 038464 247 SKDGEEIVYFLNSCGTIVACNLTQKSFT-EYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQ 325 (404)
Q Consensus 247 ~~~~~~~~y~~~~~~~i~~fD~~~~~w~-~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~ 325 (404)
+.+..||.++.+-. .++ .+.. ...|..-+++|++..+. . .|+.+|+.+.+ .
T Consensus 107 --------------~~v~v~D~~t~~~~~ti~--~~~e---G~glt~dg~~L~~SdGs-----~--~i~~iDp~T~~--v 158 (262)
T 3nol_A 107 --------------GLGFVWNIRNLRQVRSFN--YDGE---GWGLTHNDQYLIMSDGT-----P--VLRFLDPESLT--P 158 (262)
T ss_dssp --------------SEEEEEETTTCCEEEEEE--CSSC---CCCEEECSSCEEECCSS-----S--EEEEECTTTCS--E
T ss_pred --------------CEEEEEECccCcEEEEEE--CCCC---ceEEecCCCEEEEECCC-----C--eEEEEcCCCCe--E
Confidence 36888998875433 332 2221 23455556678775431 1 38888987544 2
Q ss_pred eccCChhHHHHhccCcceEEEEecCCEEEEEEecCCCceEEEEECCCCceEE-CC--CCC--C--CCceeEeeEeeeecc
Q 038464 326 IAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVTNEWVE-LP--KCS--M--NGEAVVFMSAFSFEP 398 (404)
Q Consensus 326 v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~-~~--~~~--~--~~~~~~~~~~~~~~p 398 (404)
+.+++......-+..-+.+.++ ++.||+ .......+.+-|+++++... ++ .+. . .......++++.|.|
T Consensus 159 ~~~I~V~~~g~~~~~lNELe~~--~G~lya--n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 159 VRTITVTAHGEELPELNELEWV--DGEIFA--NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp EEEEECEETTEECCCEEEEEEE--TTEEEE--EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred EEEEEeccCCccccccceeEEE--CCEEEE--EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 3333211000000111122333 678875 33446789999999987643 32 221 1 112245678888887
Q ss_pred c
Q 038464 399 R 399 (404)
Q Consensus 399 ~ 399 (404)
.
T Consensus 235 ~ 235 (262)
T 3nol_A 235 E 235 (262)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.40 E-value=4 Score=41.25 Aligned_cols=66 Identities=8% Similarity=0.184 Sum_probs=39.0
Q ss_pred CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE--ecC---CEEEEEEecCCCceEEEE
Q 038464 294 RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV--AAG---HQIFICFNSAELFSYVLC 368 (404)
Q Consensus 294 ~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~v~~~~~~~~~~~~y 368 (404)
+|.+++++..+ ..+.+|.+......+..+..+. +....+.++ ..+ +..++... ..+.+.+|
T Consensus 169 d~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~~~--------~h~~~V~~l~~sp~~~~~~~l~s~s--~Dg~I~iw 234 (753)
T 3jro_A 169 ESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLE--------GHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIW 234 (753)
T ss_dssp GGCCEEEEETT----SCEEEEEEETTTTEEEEEEEEC--------CCSSCEEEEEECCCCSSSEEEEEEE--SSSCEEEE
T ss_pred CCCEEEEEECC----CeEEEEeccCCcccceeeeeec--------CCCCcEEEEEeccCCCCCCEEEEEe--cCCEEEEe
Confidence 46666665542 5688999988766676665553 222233333 233 45544333 35678999
Q ss_pred ECCCC
Q 038464 369 DLVTN 373 (404)
Q Consensus 369 d~~~~ 373 (404)
|++++
T Consensus 235 d~~~~ 239 (753)
T 3jro_A 235 TQDNE 239 (753)
T ss_dssp EESSS
T ss_pred cCCCC
Confidence 99885
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.28 E-value=2.1 Score=36.58 Aligned_cols=174 Identities=9% Similarity=-0.004 Sum_probs=91.6
Q ss_pred eEEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCccccccee
Q 038464 166 YKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVI 245 (404)
Q Consensus 166 ~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (404)
..++...|......+.++|.++++=..... ++..+.. .+.+..++.+|.++...
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~~fg------eGi~~~~~~ly~ltw~~------------------- 84 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPPYFG------AGIVAWRDRLIQLTWRN------------------- 84 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTTCCE------EEEEEETTEEEEEESSS-------------------
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCCcce------eEEEEeCCEEEEEEeeC-------------------
Confidence 356666565456789999999986443322 3332111 02244567788775432
Q ss_pred eecCCceEEEEeccCCeEEEEecCCCcee-eccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeE
Q 038464 246 TSKDGEEIVYFLNSCGTIVACNLTQKSFT-EYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWH 324 (404)
Q Consensus 246 ~~~~~~~~~y~~~~~~~i~~fD~~~~~w~-~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~ 324 (404)
+.+..||.++-+-. .++ .+.. ...|..-+++|++-.+. . .|+.+|+++.+=
T Consensus 85 ---------------~~v~v~D~~tl~~~~ti~--~~~~---Gwglt~dg~~L~vSdgs-----~--~l~~iDp~t~~~- 136 (243)
T 3mbr_X 85 ---------------HEGFVYDLATLTPRARFR--YPGE---GWALTSDDSHLYMSDGT-----A--VIRKLDPDTLQQ- 136 (243)
T ss_dssp ---------------SEEEEEETTTTEEEEEEE--CSSC---CCEEEECSSCEEEECSS-----S--EEEEECTTTCCE-
T ss_pred ---------------CEEEEEECCcCcEEEEEe--CCCC---ceEEeeCCCEEEEECCC-----C--eEEEEeCCCCeE-
Confidence 36888998775432 232 2221 23455557788875431 2 277888875443
Q ss_pred EeccCChhHHHHh-ccCcceEEEEecCCEEEEEEecCCCceEEEEECCCCceEE-CC--CCC-CC----CceeEeeEeee
Q 038464 325 QIAAMPPAMSHEF-YGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVTNEWVE-LP--KCS-MN----GEAVVFMSAFS 395 (404)
Q Consensus 325 ~v~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~-~~--~~~-~~----~~~~~~~~~~~ 395 (404)
+.+++.... .. ...-+.+.+ .++.||+ .......+.+-|+++++... ++ .+. .. ....+.++++.
T Consensus 137 -~~~I~V~~~-g~~~~~lNeLe~--~~G~lya--nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA 210 (243)
T 3mbr_X 137 -VGSIKVTAG-GRPLDNLNELEW--VNGELLA--NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIA 210 (243)
T ss_dssp -EEEEECEET-TEECCCEEEEEE--ETTEEEE--EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEE
T ss_pred -EEEEEEccC-CcccccceeeEE--eCCEEEE--EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEE
Confidence 222321100 00 011112222 3778875 33346789999999987642 22 221 11 12335677888
Q ss_pred eccc
Q 038464 396 FEPR 399 (404)
Q Consensus 396 ~~p~ 399 (404)
|.|.
T Consensus 211 ~d~~ 214 (243)
T 3mbr_X 211 FDAE 214 (243)
T ss_dssp EETT
T ss_pred EcCC
Confidence 8773
No 37
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.23 E-value=5.1 Score=36.94 Aligned_cols=67 Identities=9% Similarity=0.153 Sum_probs=38.3
Q ss_pred ecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 112 ASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 112 s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+.+++|-+. ..+.++|||..|++...+-.+.. ......++++ .+ +.+.++.|+. ...+.+||..++.
T Consensus 114 S~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~--~~~~V~sv~f---sp---dg~~lasgs~--Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 114 SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQ--PGEYISSVAW---IK---EGNYLAVGTS--SAEVQLWDVQQQK 180 (420)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCS--TTCCEEEEEE---CT---TSSEEEEEET--TSCEEEEETTTTE
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecC--CCCcEEEEEE---CC---CCCEEEEEEC--CCeEEEEEcCCCc
Confidence 345655443 36789999999998776544431 1122233332 22 2334555443 3568999998764
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.99 E-value=5.3 Score=36.50 Aligned_cols=69 Identities=16% Similarity=0.047 Sum_probs=38.5
Q ss_pred EEecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 110 VAASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 110 ~~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+.-.++.++..+....+.+||..+++...+-.... .....++++ .+ +.+.+++++. ...+.+||..++.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~---s~---~~~~l~~~~~--dg~i~iwd~~~~~ 167 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETDE---STYVASVKW---SH---DGSFLSVGLG--NGLVDIYDVESQT 167 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECCT---TCCEEEEEE---CT---TSSEEEEEET--TSCEEEEETTTCC
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCC---CCCEEEEEE---CC---CCCEEEEECC--CCeEEEEECcCCe
Confidence 33344555555557789999999998765544431 222233322 22 2233444432 3468999988764
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.09 E-value=6.1 Score=35.06 Aligned_cols=218 Identities=10% Similarity=0.070 Sum_probs=99.6
Q ss_pred EEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeeccccccccccccc
Q 038464 126 FIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQAL 205 (404)
Q Consensus 126 ~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~ 205 (404)
++.+|+.+++...+..... ... ...+++ ++ +.+++++........+.+|+..++.++.+.. +......
T Consensus 20 v~~~d~~tg~~~~~~~~~~--~~~-p~~~a~---sp---dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~-~~~~~~~-- 87 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAA--TQN-PTYLAL---SA---KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT-VVAPGTP-- 87 (347)
T ss_dssp EEEEETTTTEEEEEEEEEE--CSC-CCCEEE---CT---TCEEEEEEEETTEEEEEEEEEETTEEEEEEE-EEEESCC--
T ss_pred EEEEcCCCCeEEEeeeeec--cCC-cceEEE---cc---CCeEEEEEecCCCceEEEEEecCCcEEEeee-eecCCCC--
Confidence 5678888888765432211 011 112222 22 3446665432234679999998888776654 2211000
Q ss_pred ccccCCccccCCe-EEEeec-CCceeeecccCCCcc-ccc------------------ceeeec-CCceEEEEecc-CCe
Q 038464 206 EVDSIDHHDDEDA-VYFLSK-AGNVVATNMQRSPSK-QYS------------------SVITSK-DGEEIVYFLNS-CGT 262 (404)
Q Consensus 206 ~~~~~~~v~~~G~-ly~~~~-~~~~~~~~~~~~~~~-~~~------------------~~~~~~-~~~~~~y~~~~-~~~ 262 (404)
|.. -.+.-+|. +|+.+. .+.+..++....... ... ..+... +|. +|+... .+.
T Consensus 88 p~~--~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~--l~v~~~~~~~ 163 (347)
T 3hfq_A 88 PAY--VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR--LAVIDLGSDK 163 (347)
T ss_dssp CSE--EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC--EEEEETTTTE
T ss_pred CEE--EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc--EEEEeCCCCE
Confidence 100 01234565 555442 233444444311110 000 012222 333 666654 467
Q ss_pred EEEEecC-CCceeeccc-cCCccccccceeEe-eCCe-EEEEEeeeccceeeEEEEEEeCCCCCeEEecc---CChhHHH
Q 038464 263 IVACNLT-QKSFTEYPR-LLPVFSEYSIDVVE-CRGE-LLVVVLSEFLESASLRVWRFDQDNGFWHQIAA---MPPAMSH 335 (404)
Q Consensus 263 i~~fD~~-~~~w~~i~~-~~p~~~~~~~~lv~-~~g~-L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~---~~~~~~~ 335 (404)
|..||+. +.....+.. ..+... .-..++. -+|+ |++.... ...+.+|.++..+.++..+.. ++..
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~-~p~~~~~spdg~~l~v~~~~----~~~v~v~~~~~~~g~~~~~~~~~~~~~~--- 235 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGF-GPRHLVFSPDGQYAFLAGEL----SSQIASLKYDTQTGAFTQLGIVKTIPAD--- 235 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTC-CEEEEEECTTSSEEEEEETT----TTEEEEEEEETTTTEEEEEEEEESSCTT---
T ss_pred EEEEEECCCCcEEEeeeEEcCCCC-CCceEEECCCCCEEEEEeCC----CCEEEEEEecCCCCceEEeeeeeecCCC---
Confidence 8888887 454443311 111111 1112333 3676 5554322 356789999875556655443 3321
Q ss_pred HhccCcceE--EEEec-CCEEEEEEecCCCceEEEEECC
Q 038464 336 EFYGKKVDI--NCVAA-GHQIFICFNSAELFSYVLCDLV 371 (404)
Q Consensus 336 ~~~~~~~~~--~~~~~-~~~i~v~~~~~~~~~~~~yd~~ 371 (404)
+ ...... .++.. +..+|+... ..+.+.+||++
T Consensus 236 -~-~~~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~ 270 (347)
T 3hfq_A 236 -Y-TAHNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVT 270 (347)
T ss_dssp -C-CSCCEEEEEEECTTSCEEEEEEE--TTTEEEEEEEC
T ss_pred -C-CCCCcceeEEECCCCCEEEEEeC--CCCEEEEEEEC
Confidence 0 001111 22233 445665433 35678899986
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.14 E-value=7.4 Score=34.11 Aligned_cols=278 Identities=9% Similarity=0.062 Sum_probs=126.4
Q ss_pred eEEEEcCCCCceeeeecCCCcee-eccCCCCCCCeeEEEecCceEEEEeC-CCeEEEEcCCCCCe-e-eCCCCCCCCCCC
Q 038464 74 WFLMVDHQLNHSIVFDSAEKTWK-ELNFPNSSPDSIPVAASGGLVCFRTA-SGKFIVSNPVTGSS-R-ELPPLDADTENQ 149 (404)
Q Consensus 74 ~~~~~~~~~~~~~~~d~~~~~w~-~l~~p~~~~~~~~~~s~~Glv~~~~~-~~~~~v~NP~t~~w-~-~lP~~~~~~~~~ 149 (404)
.+++....+.....+|..+++.. .++.+.... ...+...+..+++... ...++++|+.+++. . .+.... .
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~ 84 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ-----S 84 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS-----S
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC-----C
Confidence 34444333345668888776654 333322211 2212223445666655 67899999998874 2 222211 1
Q ss_pred ceeEEEEEecCCCCCceEEEEEeccc-CceEEEEEeCCCCceeecccccccccccccccccCCccccCCe-EEEeecC-C
Q 038464 150 SLHAIVMTTSSKNPSNYKLVLVYGEL-PKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDA-VYFLSKA-G 226 (404)
Q Consensus 150 ~~~~~~~~g~~~~~~~~kv~~~~g~~-~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~-ly~~~~~-~ 226 (404)
...++++ + ++.-.++ +.... ....+.+||..++.-..... ....+.. -...-+|. +|+.+.. +
T Consensus 85 ~~~~~~~---s--~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~-------~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 85 SMADVDI---T--PDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVG-------IAISPNGNGLILIDRSSA 150 (331)
T ss_dssp CCCCEEE---C--TTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEE-------EEECTTSSCEEEEEETTT
T ss_pred CccceEE---C--CCCCEEE-EecCCCCcccEEEEECCCCCeEEEEE-CCCCccc-------eEECCCCCEEEEEecCCC
Confidence 1111222 2 2233344 32221 12389999998876543222 1111111 11334564 6655433 3
Q ss_pred c-eeeecccCCCcc-----------cccceeeecCCceEEEEecc-CCeEEEEecCCCcee-eccccCCccccccceeEe
Q 038464 227 N-VVATNMQRSPSK-----------QYSSVITSKDGEEIVYFLNS-CGTIVACNLTQKSFT-EYPRLLPVFSEYSIDVVE 292 (404)
Q Consensus 227 ~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~y~~~~-~~~i~~fD~~~~~w~-~i~~~~p~~~~~~~~lv~ 292 (404)
. +..|+....... .....+....++..+|+... .+.|..||+++.... .+.. ++... .-..++.
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~-~~~~~~~ 228 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA-VGTNN-LPGTIVV 228 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE-EECSS-CCCCEEE
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee-ccCCC-CCceEEE
Confidence 4 444443321110 00011222223455777654 568999999876641 1111 11111 1112333
Q ss_pred -eCCe-EEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChh--HHHHhccCcceEEEEe-cCCEEEEEEecCCCceEEE
Q 038464 293 -CRGE-LLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPA--MSHEFYGKKVDINCVA-AGHQIFICFNSAELFSYVL 367 (404)
Q Consensus 293 -~~g~-L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~--~~~~~~~~~~~~~~~~-~~~~i~v~~~~~~~~~~~~ 367 (404)
-+|+ |++... . ...+.+ ++..+.+...+..++.. ...........+ ++. .+..+|+. +...+.+.+
T Consensus 229 spdg~~l~v~~~-~---~~~i~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~l~v~--~~~~~~v~v 299 (331)
T 3u4y_A 229 SRDGSTVYVLTE-S---TVDVFN--FNQLSGTLSFVKSFGHGLLIDPRPLFGANQM-ALNKTETKLFIS--ANISRELKV 299 (331)
T ss_dssp CTTSSEEEEECS-S---EEEEEE--EETTTTEEEEEEEEECCCCCCCGGGTTCCCE-EECTTSSEEEEE--ETTTTEEEE
T ss_pred CCCCCEEEEEEc-C---CCEEEE--EECCCCceeeecccccccccCCCCcccccce-EECCCCCEEEEe--cCCCCcEEE
Confidence 3666 554332 1 233444 46555455444433211 000000000112 333 35566543 344678999
Q ss_pred EECCCCceEECCCCC
Q 038464 368 CDLVTNEWVELPKCS 382 (404)
Q Consensus 368 yd~~~~~w~~~~~~~ 382 (404)
||+.++.-..+....
T Consensus 300 ~d~~~~~~~~~~~~~ 314 (331)
T 3u4y_A 300 FTISGKVVGYVAGIE 314 (331)
T ss_dssp EETTSCEEEECTTCC
T ss_pred EEecCCcccceeccc
Confidence 999998877776654
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.91 E-value=12 Score=33.39 Aligned_cols=69 Identities=6% Similarity=0.027 Sum_probs=35.5
Q ss_pred cCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 113 SGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 113 ~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
.++.++.......+.+||..+++.................++++ .+ +.+.++.++. ...+.+||..++.
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---sp---dg~~l~sgs~--d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LS---SGTQAVSGSK--DICIKVWDLAQQV 160 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CT---TSSEEEEEET--TSCEEEEETTTTE
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CC---CCCEEEEEeC--CCeEEEEECCCCc
Confidence 35655555557789999999887543222110001112223322 22 2333444432 3568999988764
No 42
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.83 E-value=15 Score=31.99 Aligned_cols=116 Identities=10% Similarity=0.118 Sum_probs=56.3
Q ss_pred ceEEEEec-cCCeEEEEecCC-Cceeecc---ccCCccccccceeEe-eCCe-EEEEEeeeccceeeEEEEEEeCCCCCe
Q 038464 251 EEIVYFLN-SCGTIVACNLTQ-KSFTEYP---RLLPVFSEYSIDVVE-CRGE-LLVVVLSEFLESASLRVWRFDQDNGFW 323 (404)
Q Consensus 251 ~~~~y~~~-~~~~i~~fD~~~-~~w~~i~---~~~p~~~~~~~~lv~-~~g~-L~~v~~~~~~~~~~~~vw~l~~~~~~W 323 (404)
+..+|+.. ..+.|..||+.+ .....+. ...+... .-..++. -+|+ |++.+.. ...+.+|.++..+..+
T Consensus 140 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~----~~~i~~~~~~~~~g~~ 214 (343)
T 1ri6_A 140 NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNEL----NSSVDVWELKDPHGNI 214 (343)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETT----TTEEEEEESSCTTSCC
T ss_pred CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCC----CCEEEEEEecCCCCcE
Confidence 44667665 557899999987 5554321 1111111 0112222 2565 5544322 3567889887644455
Q ss_pred EEe---ccCChhHHHHhccCcceE--EEEec-CCEEEEEEecCCCceEEEEECC--CCceEEC
Q 038464 324 HQI---AAMPPAMSHEFYGKKVDI--NCVAA-GHQIFICFNSAELFSYVLCDLV--TNEWVEL 378 (404)
Q Consensus 324 ~~v---~~~~~~~~~~~~~~~~~~--~~~~~-~~~i~v~~~~~~~~~~~~yd~~--~~~w~~~ 378 (404)
... ..++.. + ...... .++.. +..+|+. ....+.+.+||++ +++++.+
T Consensus 215 ~~~~~~~~~~~~----~-~~~~~~~~i~~s~dg~~l~v~--~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 215 ECVQTLDMMPEN----F-SDTRWAADIHITPDGRHLYAC--DRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEEECSCTT----C-CSCCCEEEEEECTTSSEEEEE--ETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEeeccccCcc----c-cccCCccceEECCCCCEEEEE--ecCCCEEEEEEEcCCCCceEEe
Confidence 432 333321 0 101111 22233 4456543 2235678899988 4455443
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.27 E-value=18 Score=32.39 Aligned_cols=66 Identities=15% Similarity=0.122 Sum_probs=36.9
Q ss_pred CceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCcee
Q 038464 114 GGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 114 ~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
+..+++.+. ...+.+||+.+++....-... . ...++++ .+ +.-.+++.+.. ...+.+||..++...
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~----~-~~~~~~~---s~--dg~~l~~~~~~--~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG----K-SPLGLAL---SP--DGKKLYVTNNG--DKTVSVINTVTKAVI 151 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECS----S-SEEEEEE---CT--TSSEEEEEETT--TTEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCC----C-CcceEEE---CC--CCCEEEEEeCC--CCEEEEEECCCCcEE
Confidence 445655554 578999999998765432222 1 1123322 22 22335444332 357999999887644
No 44
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=85.69 E-value=14 Score=31.41 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=55.8
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCc
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKK 341 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~ 341 (404)
.|..+|+++.+-..- .++|... +...+...+++||++.-.+ -.+|++|..+ ...+.+++.+ +
T Consensus 44 ~v~~vD~~tgkv~~~-~~l~~~~-fgeGi~~~~~~ly~ltw~~------~~v~v~D~~t--l~~~~ti~~~------~-- 105 (243)
T 3mbr_X 44 SVRKVDLETGRILQR-AEVPPPY-FGAGIVAWRDRLIQLTWRN------HEGFVYDLAT--LTPRARFRYP------G-- 105 (243)
T ss_dssp EEEEEETTTCCEEEE-EECCTTC-CEEEEEEETTEEEEEESSS------SEEEEEETTT--TEEEEEEECS------S--
T ss_pred eEEEEECCCCCEEEE-EeCCCCc-ceeEEEEeCCEEEEEEeeC------CEEEEEECCc--CcEEEEEeCC------C--
Confidence 688899998765432 1233321 2345677799999985322 2377888864 4455555421 1
Q ss_pred ceEEEEecCCEEEEEEecCCCceEEEEECCCCce
Q 038464 342 VDINCVAAGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 342 ~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
..+.++..++.+|+ .+ +...+.+.|+++.+.
T Consensus 106 ~Gwglt~dg~~L~v--Sd-gs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 106 EGWALTSDDSHLYM--SD-GTAVIRKLDPDTLQQ 136 (243)
T ss_dssp CCCEEEECSSCEEE--EC-SSSEEEEECTTTCCE
T ss_pred CceEEeeCCCEEEE--EC-CCCeEEEEeCCCCeE
Confidence 12334455677765 33 477899999998544
No 45
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.95 E-value=16 Score=30.70 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=20.7
Q ss_pred ecCceEEEEeCCCeEEEEcCCC-CCeeeCCCCC
Q 038464 112 ASGGLVCFRTASGKFIVSNPVT-GSSRELPPLD 143 (404)
Q Consensus 112 s~~Glv~~~~~~~~~~v~NP~t-~~w~~lP~~~ 143 (404)
+-+|-.++......+++||..+ ++...+....
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTT
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccc
Confidence 3345444444467899999999 8877665433
No 46
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.66 E-value=23 Score=31.28 Aligned_cols=65 Identities=14% Similarity=0.078 Sum_probs=35.7
Q ss_pred CceEEEE-eCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFR-TASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~-~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+|-.++. +....+.+||..+++...+-.... .....++++ .+ +.++++.++. ...+.+||..++.
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~---~~~i~~~~~---~p---dg~~lasg~~--dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS---DVEYSSGVL---HK---DSLLLALYSP--DGILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCS---SCCCCEEEE---CT---TSCEEEEECT--TSCEEEEESSCTT
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCC---CCceEEEEE---CC---CCCEEEEEcC--CCEEEEEECCCCC
Confidence 3444443 346789999999888654332221 111223332 12 3445666543 3579999998764
No 47
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=82.88 E-value=20 Score=31.04 Aligned_cols=120 Identities=10% Similarity=0.017 Sum_probs=61.7
Q ss_pred eEEEEecCCCcee-eccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccC
Q 038464 262 TIVACNLTQKSFT-EYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGK 340 (404)
Q Consensus 262 ~i~~fD~~~~~w~-~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~ 340 (404)
.+..||.++.+-. .++ .+.. ...|..-+++||+..+. . .|+.+|+++.+ .+.+++......-...
T Consensus 117 ~v~V~D~~Tl~~~~ti~--~~~e---GwGLt~Dg~~L~vSdGs-----~--~l~~iDp~T~~--v~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTR--YSGE---GWGLCYWNGKLVRSDGG-----T--MLTFHEPDGFA--LVGAVQVKLRGQPVEL 182 (268)
T ss_dssp EEEEEETTTTEEEEEEE--CSSC---CCCEEEETTEEEEECSS-----S--EEEEECTTTCC--EEEEEECEETTEECCC
T ss_pred EEEEEECCcCcEEEEEe--CCCc---eeEEecCCCEEEEECCC-----C--EEEEEcCCCCe--EEEEEEeCCCCccccc
Confidence 6888998875433 332 2221 23556667788876432 2 37788887543 3333321100000001
Q ss_pred cceEEEEecCCEEEEEEecCCCceEEEEECCCCceEE-CCC--C-C--C--CCceeEeeEeeeeccc
Q 038464 341 KVDINCVAAGHQIFICFNSAELFSYVLCDLVTNEWVE-LPK--C-S--M--NGEAVVFMSAFSFEPR 399 (404)
Q Consensus 341 ~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~-~~~--~-~--~--~~~~~~~~~~~~~~p~ 399 (404)
-+.+.++ ++.||+ .......+.+-|+++++... ++- + + . .....+.++++.|.|.
T Consensus 183 lNeLe~~--dG~lya--nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 183 INELECA--NGVIYA--NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp EEEEEEE--TTEEEE--EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred ccccEEe--CCEEEE--EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 1122333 668875 33346789999999987632 221 1 0 0 1223356778888773
No 48
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=81.62 E-value=32 Score=31.54 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=35.5
Q ss_pred CeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecc
Q 038464 124 GKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEET 194 (404)
Q Consensus 124 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~ 194 (404)
..+++||..+++...+.... . ...+++ + .+ +.-+|+..+.......+.+||..++..+.+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~--~~~~~~-~--sp--dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R--HNGAPA-F--SP--DGSKLAFALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S--CEEEEE-E--CT--TSSEEEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred cEEEEEECCCCcEEEeecCC---C--cccCEE-E--cC--CCCEEEEEEecCCCceEEEEECCCCCEEeCc
Confidence 48999999999887665433 1 122222 2 22 2333443433333467899999887765443
No 49
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=81.48 E-value=32 Score=31.51 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=49.8
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccC
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGK 340 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~ 340 (404)
.|..+|+.+.....+.. ... ....+.- -+|+..++.... .....||.++..+..-.++..-. .
T Consensus 248 ~i~~~d~~~~~~~~l~~---~~~-~~~~~~~spdg~~l~~~s~~---~g~~~i~~~d~~~~~~~~l~~~~---------~ 311 (415)
T 2hqs_A 248 NLYVMDLASGQIRQVTD---GRS-NNTEPTWFPDSQNLAFTSDQ---AGRPQVYKVNINGGAPQRITWEG---------S 311 (415)
T ss_dssp EEEEEETTTCCEEECCC---CSS-CEEEEEECTTSSEEEEEECT---TSSCEEEEEETTSSCCEECCCSS---------S
T ss_pred eEEEEECCCCCEEeCcC---CCC-cccceEECCCCCEEEEEECC---CCCcEEEEEECCCCCEEEEecCC---------C
Confidence 57788988776654421 111 1112222 266644444321 12345787777554433332111 0
Q ss_pred cceEEEEe-cCCEEEEEEecCCCceEEEEECCCCceEECCC
Q 038464 341 KVDINCVA-AGHQIFICFNSAELFSYVLCDLVTNEWVELPK 380 (404)
Q Consensus 341 ~~~~~~~~-~~~~i~v~~~~~~~~~~~~yd~~~~~w~~~~~ 380 (404)
...-.... .+..|++.........+.++|+++++.+.+..
T Consensus 312 ~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 312 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC
T ss_pred cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC
Confidence 11111223 34555443222234688999999988776643
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.70 E-value=32 Score=30.30 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=35.0
Q ss_pred CceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+.+++..+....+.+||..++++..+..... ......++++ .+.. ..+.++.++. ...+.+||..++.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~---~~~~-~~~~l~~~~~--d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQW---APHE-YGPLLLVASS--DGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEE---CCGG-GCSEEEEEET--TSEEEEEECCTTS
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecC--CCcceEEEEe---CCCC-CCCEEEEecC--CCcEEEEecCCCC
Confidence 3444444446789999999987654433331 1122223322 2211 0223443332 3578999987763
No 51
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=79.44 E-value=17 Score=31.37 Aligned_cols=92 Identities=5% Similarity=-0.117 Sum_probs=53.5
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCc
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKK 341 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~ 341 (404)
.|..+|+++.+-..-- ++... +...+...+++||++.-.+ -.+|++|..+ -..+.+++.+ +
T Consensus 76 ~v~~iD~~Tgkv~~~~--l~~~~-FgeGit~~g~~Ly~ltw~~------~~v~V~D~~T--l~~~~ti~~~------~-- 136 (268)
T 3nok_A 76 TLRQLSLESAQPVWME--RLGNI-FAEGLASDGERLYQLTWTE------GLLFTWSGMP--PQRERTTRYS------G-- 136 (268)
T ss_dssp EEEECCSSCSSCSEEE--ECTTC-CEEEEEECSSCEEEEESSS------CEEEEEETTT--TEEEEEEECS------S--
T ss_pred EEEEEECCCCcEEeEE--CCCCc-ceeEEEEeCCEEEEEEccC------CEEEEEECCc--CcEEEEEeCC------C--
Confidence 5888899887644321 33211 2234677789999975322 2378888874 4444444421 1
Q ss_pred ceEEEEecCCEEEEEEecCCCceEEEEECCCCce
Q 038464 342 VDINCVAAGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 342 ~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
..+.++..++.+|+ .+ ....+.+.|+++.+.
T Consensus 137 eGwGLt~Dg~~L~v--Sd-Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 137 EGWGLCYWNGKLVR--SD-GGTMLTFHEPDGFAL 167 (268)
T ss_dssp CCCCEEEETTEEEE--EC-SSSEEEEECTTTCCE
T ss_pred ceeEEecCCCEEEE--EC-CCCEEEEEcCCCCeE
Confidence 11233345677765 33 477899999988654
No 52
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=78.14 E-value=59 Score=32.56 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=34.7
Q ss_pred ceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCC
Q 038464 115 GLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLN 188 (404)
Q Consensus 115 Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~ 188 (404)
.+++..+....+.+||..++++..+..... ......++++ .+.. ..+.++.++. ...+.+||..++
T Consensus 68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~---sp~~-~~~~l~sgs~--dg~I~vwdl~~~ 133 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQW---APHE-YGPLLLVASS--DGKVSVVEFKEN 133 (753)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEE---CCGG-GCSEEEEEET--TSEEEEEECCSS
T ss_pred CEEEEEeCCCeEEEEECCCCcccccccccC--CCCCeEEEEE---CCCC-CCCEEEEEeC--CCcEEEEEeecC
Confidence 344444447789999999987654433331 1122223322 2211 0334444432 357999998776
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.54 E-value=30 Score=28.90 Aligned_cols=67 Identities=7% Similarity=0.004 Sum_probs=37.2
Q ss_pred ecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 112 ASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 112 s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
..+|.+++......+.++|+.++....++.... . ...++++ ++ +.++++.... ...+.+|+.++...
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---~-~p~~i~~---~~---~g~l~v~~~~--~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---N-YPEGLAV---DT---QGAVYVADRG--NNRVVKLAAGSKTQ 141 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC---S-SEEEEEE---CT---TCCEEEEEGG--GTEEEEECTTCCSC
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---C-CCcceEE---CC---CCCEEEEECC--CCEEEEEECCCcee
Confidence 346667776656689999998877665543221 1 1223322 32 2346665322 24677777665543
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=77.32 E-value=41 Score=30.32 Aligned_cols=65 Identities=8% Similarity=-0.042 Sum_probs=34.4
Q ss_pred CceEEEEe-CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 114 GGLVCFRT-ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 114 ~Glv~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
+|-.++.+ ....+.+||..+++....-..+ .....++++ .+. .-.++. ++. ...+.+||..++.-
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h----~~~v~~~~~---~p~--~~~l~s-~s~--d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGH----EQDIYSLDY---FPS--GDKLVS-GSG--DRTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEE---CTT--SSEEEE-EET--TSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccC----CCCEEEEEE---cCC--CCEEEE-ecC--CCcEEEEECCCCee
Confidence 55444444 3678999999887654322212 122223322 222 223333 322 36799999987654
No 55
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=76.68 E-value=45 Score=30.46 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=18.0
Q ss_pred EEecCceEEEEeCCCeEEEEcCCCCCee
Q 038464 110 VAASGGLVCFRTASGKFIVSNPVTGSSR 137 (404)
Q Consensus 110 ~~s~~Glv~~~~~~~~~~v~NP~t~~w~ 137 (404)
++..+.+++..+....+.+||..+++..
T Consensus 179 l~~~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 179 LQYDERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp EECCSSEEEEEETTSCEEEEESSSCCEE
T ss_pred EEECCCEEEEEcCCCeEEEEECCCCcEE
Confidence 3443444444444778999999988754
No 56
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=76.02 E-value=38 Score=29.20 Aligned_cols=152 Identities=6% Similarity=-0.105 Sum_probs=76.1
Q ss_pred eEEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCccccccee
Q 038464 166 YKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVI 245 (404)
Q Consensus 166 ~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (404)
.++|+..|......+.++|..+++=...-. ++.. ++. .+.+..++.+|.++..
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~-----~fg-eGi~~~g~~lyv~t~~-------------------- 84 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHK-MDDS-----YFG-EGLTLLNEKLYQVVWL-------------------- 84 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTT-----CCE-EEEEEETTEEEEEETT--------------------
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCC-----cce-EEEEEeCCEEEEEEec--------------------
Confidence 367776554445789999999886332211 2221 110 0112334567666532
Q ss_pred eecCCceEEEEeccCCeEEEEecCCCc-eeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeE
Q 038464 246 TSKDGEEIVYFLNSCGTIVACNLTQKS-FTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWH 324 (404)
Q Consensus 246 ~~~~~~~~~y~~~~~~~i~~fD~~~~~-w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~ 324 (404)
.+.+..||.++.+ -..++... .. ...|..-+++||+..+ .. .|+.+|+.+.+
T Consensus 85 --------------~~~v~viD~~t~~v~~~i~~g~-~~---g~glt~Dg~~l~vs~g-----s~--~l~viD~~t~~-- 137 (266)
T 2iwa_A 85 --------------KNIGFIYDRRTLSNIKNFTHQM-KD---GWGLATDGKILYGSDG-----TS--ILYEIDPHTFK-- 137 (266)
T ss_dssp --------------CSEEEEEETTTTEEEEEEECCS-SS---CCEEEECSSSEEEECS-----SS--EEEEECTTTCC--
T ss_pred --------------CCEEEEEECCCCcEEEEEECCC-CC---eEEEEECCCEEEEECC-----CC--eEEEEECCCCc--
Confidence 1368889988653 22332211 11 2334444667886432 12 37778886433
Q ss_pred EeccCChhHHHHhccCcceEEEEecCCEEEEEEecCCCceEEEEECCCCce
Q 038464 325 QIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 325 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
.+..++..........-+.+.+. ++.+|+. ....+.+.+-|+.+++.
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn--~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYI--NGEVWAN--IWQTDCIARISAKDGTL 184 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEE--TTEEEEE--ETTSSEEEEEETTTCCE
T ss_pred EEEEEEECCCCcccccceeEEEE--CCEEEEe--cCCCCeEEEEECCCCcE
Confidence 33333311000000011122332 6688753 33467899999998765
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.25 E-value=44 Score=29.58 Aligned_cols=62 Identities=5% Similarity=0.134 Sum_probs=28.9
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc-eeecc
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC-WEEET 194 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~-W~~~~ 194 (404)
...+.+||..++.|..+..+.. ......++++ .+. .+.++.++. ...+.+||..++. |....
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~---s~~---~~~l~s~s~--d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSD--HDKIVTCVDW---APK---SNRIVTCSQ--DRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCC--CSSCEEEEEE---CTT---TCCEEEEET--TSSEEEC------CCCCEE
T ss_pred CCEEEEEEccCCceEEEEEEec--CCceEEEEEE---eCC---CCEEEEEeC--CCeEEEEEcCCCCceeeee
Confidence 5567899999887766655542 1222223322 222 223443332 2468899988776 54433
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=74.59 E-value=40 Score=28.79 Aligned_cols=67 Identities=9% Similarity=0.159 Sum_probs=36.7
Q ss_pred ecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 112 ASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 112 s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+.+|+|-+ +..+.+.|||+.|++...+-.... ......++++ .+ +.+.++.++. ...+.+|+..+++
T Consensus 34 S~~~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~--~~~~V~~v~~---~~---~~~~l~sgs~--Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 34 SSGNVLAV-ALDNSVYLWSASSGDILQLLQMEQ--PGEYISSVAW---IK---EGNYLAVGTS--SAEVQLWDVQQQK 100 (318)
T ss_dssp CTTSEEEE-EETTEEEEEETTTCCEEEEEECCS--TTCCEEEEEE---CT---TSSEEEEEET--TSEEEEEETTTTE
T ss_pred CCCCEEEE-EeCCEEEEEECCCCCEEEEEEecC--CCCeEEEEEE---CC---CCCEEEEEEC--CCcEEEeecCCce
Confidence 34554433 335679999999998765433331 1122223322 22 2334444433 3578999998765
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=73.53 E-value=42 Score=28.63 Aligned_cols=54 Identities=6% Similarity=0.023 Sum_probs=31.2
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC-CCeEEEEcCCCCCeeeCC
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA-SGKFIVSNPVTGSSRELP 140 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP 140 (404)
...+|+..+ ...+..+... ........+|.+++... ...+.++|+.+++...+.
T Consensus 52 i~~~~~~~~-~~~~~~~~~~-~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 52 TWAWSDDGQ-LSPEMHPSHH-QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEETTSC-EEEEESSCSS-EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEECCCC-eEEEECCCCC-cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 345666655 4444333221 11222334676776654 578999999999877654
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=73.20 E-value=56 Score=29.87 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=36.0
Q ss_pred EEecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 110 VAASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 110 ~~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+...+++++..+....+.+||..+++....-..+ .....++... . . +++.++. ...+.+||..++.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~---~---~--~l~s~~~--dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH----TGGVWSSQMR---D---N--IIISGST--DRTLKVWNAETGE 190 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCCC----SSCEEEEEEE---T---T--EEEEEET--TSCEEEEETTTTE
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC----CCCEEEEEec---C---C--EEEEEeC--CCeEEEEECCcCc
Confidence 4444555555555778999999988754322222 1222333221 1 1 3333332 3568999988764
No 61
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=72.64 E-value=43 Score=28.29 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=47.9
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEE-EecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCC
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPV-AASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKN 162 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~-~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~ 162 (404)
...+|+. ++...+..|........+ ...+|.+++... ...++++|+ +++........ ......+++. ++
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~---~~- 150 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPN---KGSYPSFITL---GS- 150 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS---TTCCEEEEEE---CT-
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCC---CCCCCceEEE---cC-
Confidence 4466765 444444443211112223 334677777654 568999999 77765443221 1111223322 22
Q ss_pred CCceEEEEEecccCceEEEEEeCCCCceeec
Q 038464 163 PSNYKLVLVYGELPKLSFKVYNSCLNCWEEE 193 (404)
Q Consensus 163 ~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~ 193 (404)
+.++++... ....+.+|+. ++.....
T Consensus 151 --~g~l~v~~~--~~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 151 --DNALWFTEN--QNNAIGRITE-SGDITEF 176 (299)
T ss_dssp --TSCEEEEET--TTTEEEEECT-TCCEEEE
T ss_pred --CCCEEEEeC--CCCEEEEEcC-CCcEEEe
Confidence 235665432 1346888888 6666543
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=71.14 E-value=49 Score=28.37 Aligned_cols=62 Identities=8% Similarity=-0.019 Sum_probs=31.9
Q ss_pred eEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 116 LVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 116 lv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+++.......+.+||..+++....-... .....++++ .+ +. +.++.++. ...+.+||..++.
T Consensus 155 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~----~~~i~~~~~---~~--~~-~~l~~~~~--dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 155 VCFSCCSDGNIAVWDLHNQTLVRQFQGH----TDGASCIDI---SN--DG-TKLWTGGL--DNTVRSWDLREGR 216 (337)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEE---CT--TS-SEEEEEET--TSEEEEEETTTTE
T ss_pred EEEEEeCCCcEEEEeCCCCceeeeeecc----cCceEEEEE---CC--CC-CEEEEEec--CCcEEEEECCCCc
Confidence 4444444678999999887644322111 111222322 22 12 23333332 3578999988764
No 63
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=70.35 E-value=62 Score=29.22 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=38.3
Q ss_pred CceEEEEeC-CCeEEEEcCCCCCeeeCCCCC-CCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFRTA-SGKFIVSNPVTGSSRELPPLD-ADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+|.+++.+. ...+.+||+.+++.....+.. .........++++ . .+.++++.++. ...+.+||..++.
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~---~---~~~~~~~s~~~--d~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI---P---EHNELWVSQMQ--ANAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE---G---GGTEEEEEEGG--GTEEEEEETTTCC
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEE---c---CCCEEEEEECC--CCEEEEEECCCce
Confidence 777777665 557999999998876543332 1001111122222 1 13455655432 3578999988754
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=70.08 E-value=54 Score=28.45 Aligned_cols=52 Identities=8% Similarity=0.075 Sum_probs=30.1
Q ss_pred eeeeecCCCcee-eccCCCCCCCeeEEEecCceEEEEeC-CCeEEEEcCCCCCee
Q 038464 85 SIVFDSAEKTWK-ELNFPNSSPDSIPVAASGGLVCFRTA-SGKFIVSNPVTGSSR 137 (404)
Q Consensus 85 ~~~~d~~~~~w~-~l~~p~~~~~~~~~~s~~Glv~~~~~-~~~~~v~NP~t~~w~ 137 (404)
...+|+.+.+.. .++....+. ...+...++.+++... ...+.++|+.+++..
T Consensus 71 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAKTGEVK 124 (353)
T ss_dssp EEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCCCCeeE
Confidence 456777655432 333322222 2224444555776655 578999999998853
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=69.46 E-value=58 Score=28.50 Aligned_cols=62 Identities=8% Similarity=0.119 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeec
Q 038464 122 ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEE 193 (404)
Q Consensus 122 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~ 193 (404)
....+.+||..++++..+..+.. ......++++. + +.+.++.++. ...+.+||..++.+...
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~---~---~~~~l~~~~~--dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWA---P---DSNRIVTCGT--DRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEE---T---TTTEEEEEET--TSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecC--CCCcccEEEEe---C---CCCEEEEEcC--CCeEEEEECCCCeeeee
Confidence 36678899998886443333221 11222333332 2 1223343332 34688999888776544
No 66
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=69.32 E-value=97 Score=31.05 Aligned_cols=269 Identities=9% Similarity=0.026 Sum_probs=120.4
Q ss_pred eeeeecCCCceeeccCCCC------CCCeeEE-EecCceEEEEeCCCeEEEEcCCCCCeeeCCC-------CCCCCCC-C
Q 038464 85 SIVFDSAEKTWKELNFPNS------SPDSIPV-AASGGLVCFRTASGKFIVSNPVTGSSRELPP-------LDADTEN-Q 149 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~------~~~~~~~-~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~-------~~~~~~~-~ 149 (404)
...||+.++++..+..+.. ......+ .-.+|.+.+......++++|+.+++...+.. ....... .
T Consensus 232 l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~ 311 (781)
T 3v9f_A 232 LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLS 311 (781)
T ss_dssp EEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBS
T ss_pred HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCC
Confidence 4567887777665543221 1112222 2356777776544678999999887765443 1100000 0
Q ss_pred ceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecccccccc-cccccccccCCcc--ccCCeEEEeecCC
Q 038464 150 SLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRK-SEQALEVDSIDHH--DDEDAVYFLSKAG 226 (404)
Q Consensus 150 ~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~-~~~~~~~~~~~~v--~~~G~ly~~~~~~ 226 (404)
.....+++ .|. ...|.+ |.. ...+..|+..++.++.... .+.. .....+......+ .-+|.+++-+..+
T Consensus 312 ~~~v~~i~-~D~---~g~lWi-gt~--~~Gl~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~ 383 (781)
T 3v9f_A 312 NASARYIF-QDS---FNNIWI-GTW--GGGINFISNAPPTFHTWSY-SPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGG 383 (781)
T ss_dssp SSCEEEEE-ECS---SCCEEE-EEB--SSCEEEECSSCCSCEEEC-----CCCSSCCSSSCEEEEEECTTSCEEEEEBSS
T ss_pred CCeEEEEE-EeC---CCCEEE-Eec--CCeEEEeCCCCCcceeecc-CccccccCCCCCcceEEEEEcCCCCEEEEeCCC
Confidence 00111122 122 222332 211 1347777877776655432 1000 0000000000112 2246664433245
Q ss_pred ceeeecccCCCccccc--------ceeee-cCCceEEEEeccCCeEEEEecCCCceeecccc-CCccccccceeEee-CC
Q 038464 227 NVVATNMQRSPSKQYS--------SVITS-KDGEEIVYFLNSCGTIVACNLTQKSFTEYPRL-LPVFSEYSIDVVEC-RG 295 (404)
Q Consensus 227 ~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~-~p~~~~~~~~lv~~-~g 295 (404)
++..+|........|. .+..+ .+..+.+++-...+.+..||..++.+..+... ++. . .-..+.+. +|
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~-~-~v~~i~~d~~g 461 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNEL-L-DVRVFYEDKNK 461 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCC-C-CEEEEEECTTS
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCC-C-eEEEEEECCCC
Confidence 5656654322111111 11111 12234566655556899999999888876421 111 1 11234443 67
Q ss_pred eEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE--ecCCEEEEEEecCCCceEEEEECCCC
Q 038464 296 ELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV--AAGHQIFICFNSAELFSYVLCDLVTN 373 (404)
Q Consensus 296 ~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~~~~~~~~~~~~yd~~~~ 373 (404)
+|++.... .++.++..+.+|+.....+.. .+. ...+.+. ..++.|+|. .. ...+..||.+++
T Consensus 462 ~lwigt~~--------Gl~~~~~~~~~~~~~~~~~~~---~~~--~~~i~~i~~d~~g~lWig--t~-~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 462 KIWIGTHA--------GVFVIDLASKKVIHHYDTSNS---QLL--ENFVRSIAQDSEGRFWIG--TF-GGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEEETT--------EEEEEESSSSSCCEEECTTTS---SCS--CSCEEEEEECTTCCEEEE--ES-SSCEEEECTTCC
T ss_pred CEEEEECC--------ceEEEeCCCCeEEecccCccc---ccc--cceeEEEEEcCCCCEEEE--Ec-CCCEEEEeCCCC
Confidence 87764321 277788877778776543310 000 1122332 346677553 21 246889999988
Q ss_pred ceEECC
Q 038464 374 EWVELP 379 (404)
Q Consensus 374 ~w~~~~ 379 (404)
+++...
T Consensus 526 ~~~~~~ 531 (781)
T 3v9f_A 526 LVRKFN 531 (781)
T ss_dssp EEEEEC
T ss_pred eEEEcc
Confidence 887764
No 67
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=68.82 E-value=52 Score=27.76 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=36.5
Q ss_pred ecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 112 ASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 112 s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
..+|.+++... ...+.++|+..+....+.... ......++++ ++ +.++++.... ...+.+|+...+.
T Consensus 129 ~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~---~~~~p~~i~~---~~---~g~l~v~~~~--~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 129 DNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSK---HLEFPNGVVV---ND---KQEIFISDNR--AHCVKVFNYEGQY 196 (286)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEEECTT---TCSSEEEEEE---CS---SSEEEEEEGG--GTEEEEEETTCCE
T ss_pred eCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCC---ccCCcEEEEE---CC---CCCEEEEECC--CCEEEEEcCCCCE
Confidence 34677777754 678999998655444443211 1111223322 22 3457765432 3578899986543
No 68
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=68.23 E-value=72 Score=29.12 Aligned_cols=63 Identities=6% Similarity=-0.071 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeec
Q 038464 122 ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEE 193 (404)
Q Consensus 122 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~ 193 (404)
....+.|||..+++...+-...- ......++++ .+. +...++ .++. ...+.+||..++.-+..
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~g--H~~~V~~l~f---~p~-~~~~l~-s~s~--D~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIG--AGGSITGLKF---NPL-NTNQFY-ASSM--EGTTRLQDFKGNILRVF 202 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCS--SSCCCCEEEE---CSS-CTTEEE-EECS--SSCEEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCCCceeEEEccC--CCCCEEEEEE---eCC-CCCEEE-EEeC--CCEEEEeeccCCceeEE
Confidence 35678899998877543322220 1222233432 221 122333 3332 35688999887655433
No 69
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=68.04 E-value=1e+02 Score=30.86 Aligned_cols=199 Identities=10% Similarity=-0.012 Sum_probs=99.6
Q ss_pred cCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceee
Q 038464 113 SGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEE 192 (404)
Q Consensus 113 ~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~ 192 (404)
.+|.|.+......++++|+.++++..++.... ......++ . .|. +.++.+.. . ..+..|+..++.|+.
T Consensus 416 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~--~~~~v~~i--~-~d~---~g~lwigt-~---~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 416 SEGNLWFGTYLGNISYYNTRLKKFQIIELEKN--ELLDVRVF--Y-EDK---NKKIWIGT-H---AGVFVIDLASKKVIH 483 (781)
T ss_dssp TTSCEEEEETTEEEEEECSSSCEEEECCSTTT--CCCCEEEE--E-ECT---TSEEEEEE-T---TEEEEEESSSSSCCE
T ss_pred CCCCEEEEeccCCEEEEcCCCCcEEEeccCCC--CCCeEEEE--E-ECC---CCCEEEEE-C---CceEEEeCCCCeEEe
Confidence 36777775545679999999999887764311 11111222 2 122 34454432 1 468899999988876
Q ss_pred cccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCc
Q 038464 193 ETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKS 272 (404)
Q Consensus 193 ~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~ 272 (404)
... .+........... -...-+|.+ |++.. .+.+..||.+++.
T Consensus 484 ~~~-~~~~~~~~~~i~~-i~~d~~g~l-Wigt~----------------------------------~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 484 HYD-TSNSQLLENFVRS-IAQDSEGRF-WIGTF----------------------------------GGGVGIYTPDMQL 526 (781)
T ss_dssp EEC-TTTSSCSCSCEEE-EEECTTCCE-EEEES----------------------------------SSCEEEECTTCCE
T ss_pred ccc-CcccccccceeEE-EEEcCCCCE-EEEEc----------------------------------CCCEEEEeCCCCe
Confidence 543 1100000000000 001123444 22221 1247778888888
Q ss_pred eeecccc--CCccccccceeEe-eCCeEEEEEeeeccceeeEEE-EEEeCCCCCeEEeccCChhHHHHhccCcceEEEEe
Q 038464 273 FTEYPRL--LPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRV-WRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVA 348 (404)
Q Consensus 273 w~~i~~~--~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~v-w~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~ 348 (404)
+..+... +|.. .-..+.+ .+|+|++.... .+ +.+++.+.++.....-. .+......-.+..
T Consensus 527 ~~~~~~~~~l~~~--~i~~i~~d~~g~lWi~T~~--------Glv~~~d~~~~~~~~~~~~~-----gl~~~~i~~i~~d 591 (781)
T 3v9f_A 527 VRKFNQYEGFCSN--TINQIYRSSKGQMWLATGE--------GLVCFPSARNFDYQVFQRKE-----GLPNTHIRAISED 591 (781)
T ss_dssp EEEECTTTTCSCS--CEEEEEECTTSCEEEEETT--------EEEEESCTTTCCCEEECGGG-----TCSCCCCCEEEEC
T ss_pred EEEccCCCCCCCC--eeEEEEECCCCCEEEEECC--------CceEEECCCCCcEEEccccC-----CCCCceEEEEEEC
Confidence 7766321 2211 1123444 47788764421 14 67777666776654211 1111111111223
Q ss_pred cCCEEEEEEecCCCceEEEEECCCCceEECC
Q 038464 349 AGHQIFICFNSAELFSYVLCDLVTNEWVELP 379 (404)
Q Consensus 349 ~~~~i~v~~~~~~~~~~~~yd~~~~~w~~~~ 379 (404)
.++.|++ .+ ...+..||+++++++...
T Consensus 592 ~~g~lW~--~t--~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 592 KNGNIWA--ST--NTGISCYITSKKCFYTYD 618 (781)
T ss_dssp SSSCEEE--EC--SSCEEEEETTTTEEEEEC
T ss_pred CCCCEEE--Ec--CCceEEEECCCCceEEec
Confidence 4567754 33 356889999988877653
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=67.91 E-value=60 Score=28.10 Aligned_cols=64 Identities=14% Similarity=0.070 Sum_probs=31.9
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEe
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQI 326 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v 326 (404)
.|..||+++.....+-....... .-..++. -+|++++.............||.++..+.+...+
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAY-CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCC-CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred eEEEEeCCCCEEEEEEccCccCC-cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 57788888776553211011111 1112333 3788887553211112245689998865555544
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.70 E-value=1e+02 Score=30.69 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=30.4
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCcee
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
...+.+||..+++....-..+ .....++++.. +.+.+++++. ...+.+|+..++...
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~----~~~v~~~~~s~------~~~~l~~~~~--dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVT----ETPVRAGKFIA------RKNWIIVGSD--DFRIRVFNYNTGEKV 90 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECC----SSCEEEEEEEG------GGTEEEEEET--TSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCceEEEEecC----CCcEEEEEEeC------CCCEEEEEeC--CCeEEEEECCCCcEE
Confidence 556789998887654321111 11223333321 2334444433 467999999887643
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=67.35 E-value=65 Score=28.30 Aligned_cols=99 Identities=17% Similarity=0.274 Sum_probs=46.4
Q ss_pred eEEEEecCCCceeeccccCCccccccc-eeEee-CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhcc
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSI-DVVEC-RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYG 339 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~-~lv~~-~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~ 339 (404)
.+..+|..++.+..+.. +..+. ..+ .+... +|++++.+..+ ..+.||.++... .+..+..+. +
T Consensus 84 ~v~iw~~~~~~~~~~~~-~~~h~-~~v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~~-~~~~~~~~~--------~ 148 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTT-LEGHE-NEVKSVAWAPSGNLLATCSRD----KSVWVWEVDEED-EYECVSVLN--------S 148 (345)
T ss_dssp CEEEEEECCC-EEEEEE-ECCCS-SCEEEEEECTTSSEEEEEETT----SCEEEEEECTTS-CEEEEEEEC--------C
T ss_pred cEEEEEccCCCeEEEEE-ccCCC-CCceEEEEeCCCCEEEEEECC----CeEEEEECCCCC-CeEEEEEec--------C
Confidence 45566766655543321 11111 111 22222 56766655433 568899887642 333333322 1
Q ss_pred CcceEEEE--ecCCEEEEEEecCCCceEEEEECCCCceEE
Q 038464 340 KKVDINCV--AAGHQIFICFNSAELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 340 ~~~~~~~~--~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~ 377 (404)
....+.++ ..++.+++... ..+.+.+||.++++|..
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s--~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASAS--YDDTVKLYREEEDDWVC 186 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEE--TTSCEEEEEEETTEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEe--CCCcEEEEEecCCCEEE
Confidence 11222222 23333322222 35678889988887753
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=65.68 E-value=76 Score=28.44 Aligned_cols=23 Identities=13% Similarity=-0.013 Sum_probs=15.4
Q ss_pred CceEEEEe-CCCeEEEEcCCCCCe
Q 038464 114 GGLVCFRT-ASGKFIVSNPVTGSS 136 (404)
Q Consensus 114 ~Glv~~~~-~~~~~~v~NP~t~~w 136 (404)
+|-+++.+ ....+.+||..+++.
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCCEEEEEeCCCeEEEEEccCCCC
Confidence 44444444 467899999988754
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=65.67 E-value=68 Score=27.86 Aligned_cols=66 Identities=8% Similarity=0.014 Sum_probs=33.0
Q ss_pred CceEEEEe-CCCeEEEEcCCCCCeeeC-CCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFRT-ASGKFIVSNPVTGSSREL-PPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~~-~~~~~~v~NP~t~~w~~l-P~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+|-+++.+ ....+.+||..+++.... ..... ......++++ .+. .- .++.++. ...+.+||..++.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~---~~~--~~-~l~~~~~--dg~i~i~d~~~~~ 194 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG--HRDEVLSADY---DLL--GE-KIMSCGM--DHSLKLWRINSKR 194 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTS--CSSCEEEEEE---CTT--SS-EEEEEET--TSCEEEEESCSHH
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEeccccc--ccCceeEEEE---CCC--CC-EEEEecC--CCCEEEEECCCCc
Confidence 44444444 467899999988775433 21111 1122222322 222 22 3333332 3568899987653
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.61 E-value=73 Score=28.23 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=29.8
Q ss_pred cCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 113 SGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 113 ~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
.+|.++..+....+.+||..+++.................++++ .+ +.+.++.++. ...+.+||..++.
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~---sp---dg~~l~sgs~--dg~v~iwd~~~~~ 172 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV---FS---DGTQAVSGGK--DFSVKVWDLSQKA 172 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE---CS---SSSEEEEEET--TSCEEEEETTTTE
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE---CC---CCCEEEEEeC--CCeEEEEECCCCc
Confidence 35666655556789999998887543333211001122223322 22 2233444332 3468899988764
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=64.57 E-value=86 Score=33.31 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=34.5
Q ss_pred ceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeec
Q 038464 115 GLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEE 193 (404)
Q Consensus 115 Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~ 193 (404)
.++.+......+.+||..+++........ .....++++ .+ +.+.++.++. ...+.+||..++.....
T Consensus 974 ~~l~~g~~~g~i~i~d~~~~~~~~~~~~h----~~~v~~l~~---s~---dg~~l~s~~~--dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 974 EYVAFGDEDGAIKIIELPNNRVFSSGVGH----KKAVRHIQF---TA---DGKTLISSSE--DSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp SEEEEEETTSCCEEEETTTTSCEEECCCC----SSCCCCEEE---CS---SSSCEEEECS--SSBEEEEETTTTEEECC
T ss_pred CEEEEEcCCCCEEEEEcCCCceeeecccC----CCceEEEEE---CC---CCCEEEEEcC--CCEEEEEECCCCceEEE
Confidence 33433334667889998887654332222 111122322 11 2233444332 35689999988776543
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=64.06 E-value=76 Score=27.87 Aligned_cols=118 Identities=15% Similarity=0.222 Sum_probs=62.0
Q ss_pred ceEEEEecc-CCeEEEEecCCCceeecccc--CCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEe
Q 038464 251 EEIVYFLNS-CGTIVACNLTQKSFTEYPRL--LPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQI 326 (404)
Q Consensus 251 ~~~~y~~~~-~~~i~~fD~~~~~w~~i~~~--~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v 326 (404)
+.++|+... .+.|..||+.+..+..+... .+........++. -+|+...+.... ....+.||.++..+.+++.+
T Consensus 222 g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~--~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 222 GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL--KADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS--SSCEEEEEEECTTTCCEEEE
T ss_pred CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC--CCCEEEEEEEcCCCCcEEEe
Confidence 456777764 57899999887766544211 1211111113333 266643333221 13578899998766677777
Q ss_pred ccCChhHHHHhccCcceEEEEec-CCEEEEEEecCCCceEEE--EECCCCceEECC
Q 038464 327 AAMPPAMSHEFYGKKVDINCVAA-GHQIFICFNSAELFSYVL--CDLVTNEWVELP 379 (404)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~--yd~~~~~w~~~~ 379 (404)
..++. +....-.++.. ++.+|+. +...+.+.+ +|.++++.+.+.
T Consensus 300 ~~~~~-------g~~~~~~~~spdg~~l~~~--~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 300 GYQLT-------GIHPRNFIITPNGKYLLVA--CRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEC-------SSCCCEEEECTTSCEEEEE--ETTTTEEEEEEECTTTCCEEECS
T ss_pred eEecC-------CCCCceEEECCCCCEEEEE--ECCCCCEEEEEEECCCCcEeecc
Confidence 65542 11111123333 4456543 223455666 566678877665
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=63.95 E-value=81 Score=28.21 Aligned_cols=65 Identities=8% Similarity=0.054 Sum_probs=34.8
Q ss_pred cCceEEEEe-CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 113 SGGLVCFRT-ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 113 ~~Glv~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
.+|-.++.+ ....+.+||..+++....-... .....++++ .+. .+.++.++. ...+.+||..++.
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h----~~~v~~~~~---~~~---~~~l~s~s~--d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAH----VSEITKLKF---FPS---GEALISSSQ--DMQLKIWSVKDGS 172 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSS----SSCEEEEEE---CTT---SSEEEEEET--TSEEEEEETTTCC
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccc----cCccEEEEE---CCC---CCEEEEEeC--CCeEEEEeCCCCc
Confidence 345444444 4678999999888765543222 122233322 222 223444332 3579999987653
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=62.36 E-value=88 Score=28.05 Aligned_cols=66 Identities=9% Similarity=0.070 Sum_probs=34.1
Q ss_pred CceEEEEe-CCCeEEEEcCCCCCeee-CCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFRT-ASGKFIVSNPVTGSSRE-LPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~~-~~~~~~v~NP~t~~w~~-lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+|-.++.+ ....+.+||..+++-.. +.... ....++++. + .+..+++.++......+.+||..++.
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~---p--~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKTNHN-----AAVKAVAWC---P--WQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEECCCS-----SCCCEEEEC---T--TSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEecCCc-----ceEEEEEEC---C--CCCCEEEEecCCCCCEEEEEECCCCC
Confidence 44344433 36788999998766432 22111 112233222 2 12235555432235679999988764
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=61.83 E-value=1.3e+02 Score=29.88 Aligned_cols=63 Identities=17% Similarity=0.094 Sum_probs=32.9
Q ss_pred CceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCC
Q 038464 114 GGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLN 188 (404)
Q Consensus 114 ~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~ 188 (404)
+.++...+....+.|||..+++....-... .....++++ .+ +.+.++.++. ...+.+|+..++
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~---s~---~~~~l~~~~~--dg~i~vw~~~~~ 129 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAV---HP---TKPYVLSGSD--DLTVKLWNWENN 129 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEE---CS---SSSEEEEEET--TSEEEEEEGGGT
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecC----CCCEEEEEE---eC---CCCEEEEEcC--CCEEEEEECCCC
Confidence 444555445778999999988764322211 111222322 22 2222333332 357889998765
No 81
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=59.51 E-value=1e+02 Score=27.77 Aligned_cols=68 Identities=13% Similarity=-0.037 Sum_probs=36.5
Q ss_pred cCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEeccc-----CceEEEEEeCC
Q 038464 113 SGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGEL-----PKLSFKVYNSC 186 (404)
Q Consensus 113 ~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~-----~~~~~~vy~~~ 186 (404)
.+..+++.+. ...+.+||+.+++....-+.. . ...+++ .++. .-.+++.+... ....+.+||..
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~-~~~~~~---~~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI----G-LPRGLL---LSKD--GKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCC----S-EEEEEE---ECTT--SSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCC----C-CceEEE---EcCC--CCEEEEEECCCCccccCCCeEEEEECC
Confidence 3556666653 678999999988765433222 1 112222 2222 22344433211 24579999998
Q ss_pred CCce
Q 038464 187 LNCW 190 (404)
Q Consensus 187 ~~~W 190 (404)
++.-
T Consensus 292 ~~~~ 295 (433)
T 3bws_A 292 KEKL 295 (433)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7653
No 82
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=58.74 E-value=87 Score=26.83 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=35.8
Q ss_pred CeEEEEecC--CCceeeccccCCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCC
Q 038464 261 GTIVACNLT--QKSFTEYPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMP 330 (404)
Q Consensus 261 ~~i~~fD~~--~~~w~~i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~ 330 (404)
+.|..||+. +..+..+.. .+.... -..++. -+|+..+++... ...+.||.++..+++++.+..++
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~-~~~~~~-~~~~~~s~dg~~l~~~~~~---~~~v~v~~~d~~~g~~~~~~~~~ 320 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGF-QPTETQ-PRGFNVDHSGKYLIAAGQK---SHHISVYEIVGEQGLLHEKGRYA 320 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEE-EECSSS-CCCEEECTTSSEEEEECTT---TCEEEEEEEETTTTEEEEEEEEE
T ss_pred CEEEEEEEcCCCCceEEeee-ecCCCc-cceEEECCCCCEEEEecCC---CCeEEEEEEcCCCceeeEccccc
Confidence 367777776 445554421 111111 112232 256544444322 35788999998877888887665
No 83
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=57.84 E-value=90 Score=26.73 Aligned_cols=65 Identities=14% Similarity=-0.085 Sum_probs=40.9
Q ss_pred cCceEEEEeC---CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 113 SGGLVCFRTA---SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 113 ~~Glv~~~~~---~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
.+|.+|.+.+ .+.+.++|+.|++-..--+++ ......+++.. .-+|+++... ...+.+||.++.+
T Consensus 51 ~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~-------g~~ly~ltw~--~~~v~v~D~~t~~ 118 (262)
T 3nol_A 51 RNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDW-------KDKIVGLTWK--NGLGFVWNIRNLR 118 (262)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEE-------TTEEEEEESS--SSEEEEEETTTCC
T ss_pred ECCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEe-------CCEEEEEEee--CCEEEEEECccCc
Confidence 3788888775 358999999999854322232 12112234443 2478877532 4679999998865
No 84
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=57.68 E-value=84 Score=26.34 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=48.4
Q ss_pred ceeeeecCCCceeeccCCCCCCCeeEE-EecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCC
Q 038464 84 HSIVFDSAEKTWKELNFPNSSPDSIPV-AASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSK 161 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~~~~~~~~~-~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~ 161 (404)
....||+. ++...++.+........+ ...+|.+++... ...+.++|+. ++...+.... ......+++. ++
T Consensus 42 ~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~---~~ 113 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITE---GL 113 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEE---CS
T ss_pred eEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceE---CC
Confidence 34567777 656555444321122223 335677777765 5679999998 7765443221 1111223322 22
Q ss_pred CCCceEEEEEecccCceEEEEEeCCCCcee
Q 038464 162 NPSNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 162 ~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
+.++++.... ...+..|+.. +...
T Consensus 114 ---~g~l~v~~~~--~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 114 ---NGDIWFTQLN--GDRIGKLTAD-GTIY 137 (300)
T ss_dssp ---TTCEEEEETT--TTEEEEECTT-SCEE
T ss_pred ---CCCEEEEccC--CCeEEEECCC-CCEE
Confidence 2345554321 2467788877 5544
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.27 E-value=97 Score=26.94 Aligned_cols=31 Identities=6% Similarity=-0.125 Sum_probs=20.4
Q ss_pred ecCCEEEEEEecCCCceEEEEECCC--CceEECCCC
Q 038464 348 AAGHQIFICFNSAELFSYVLCDLVT--NEWVELPKC 381 (404)
Q Consensus 348 ~~~~~i~v~~~~~~~~~~~~yd~~~--~~w~~~~~~ 381 (404)
..++.+++. . ..+.+.+||+++ ++|..+...
T Consensus 253 ~~~~~~l~~-~--~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 253 ITESSLVAA-G--HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EETTEEEEE-E--TTSSCEEEEEETTTTEEEECCCC
T ss_pred ecCCCEEEE-E--eCCeEEEEEccCcCceEEEeecc
Confidence 345555433 2 356788999998 888776543
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=57.09 E-value=94 Score=26.69 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=18.7
Q ss_pred eEEEEeCCCeEEEEcC-CCCCeeeCCC
Q 038464 116 LVCFRTASGKFIVSNP-VTGSSRELPP 141 (404)
Q Consensus 116 lv~~~~~~~~~~v~NP-~t~~w~~lP~ 141 (404)
+++..+....+.+||. .+++...+..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccc
Confidence 4544444778999999 8888766654
No 87
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=56.24 E-value=54 Score=32.49 Aligned_cols=29 Identities=21% Similarity=0.063 Sum_probs=18.4
Q ss_pred cCCEEEEEEecC---CCceEEEEECCCCc--eEE
Q 038464 349 AGHQIFICFNSA---ELFSYVLCDLVTNE--WVE 377 (404)
Q Consensus 349 ~~~~i~v~~~~~---~~~~~~~yd~~~~~--w~~ 377 (404)
.++.||+..... ..+.+.+||.++++ |+.
T Consensus 173 ~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 173 FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 367786532211 24789999999875 653
No 88
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=55.55 E-value=87 Score=25.88 Aligned_cols=93 Identities=9% Similarity=0.057 Sum_probs=45.8
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEEecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCC
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVAASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNP 163 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~ 163 (404)
...||+..+....+...............+|.+++... ...+.++++-+........... .. ..++++ ++
T Consensus 89 i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-p~~i~~---~~-- 159 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL---ND-PDGVAV---DN-- 159 (270)
T ss_dssp EEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC---CS-CCCEEE---CT--
T ss_pred EEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC---CC-ceeEEE---eC--
Confidence 44667665544333322111111212233677777654 5678888877665544332221 11 122322 22
Q ss_pred CceEEEEEecccCceEEEEEeCCCCc
Q 038464 164 SNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 164 ~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+.++++.... ...+.+|+..++.
T Consensus 160 -~g~l~v~~~~--~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 160 -SGNVYVTDTD--NNRVVKLEAESNN 182 (270)
T ss_dssp -TCCEEEEEGG--GTEEEEECTTTCC
T ss_pred -CCCEEEEECC--CCEEEEEecCCCc
Confidence 2346665422 3478889887654
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.18 E-value=97 Score=27.13 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=52.5
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEee-CCe-EEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhcc
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVEC-RGE-LLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYG 339 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~-~g~-L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~ 339 (404)
.+..+|.++..+..+... . ...-..++.. +|+ ||+.... ......+.+|.++..+++.+.+..++.. +
T Consensus 30 ~~~~~d~~~g~~~~~~~~--~-~~~p~~l~~spdg~~l~~~~~~-~~~~~~v~~~~~~~~~g~~~~~~~~~~~------~ 99 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA--E-VANPSYLIPSADGKFVYSVNEF-SKDQAAVSAFAFDKEKGTLHLLNTQKTM------G 99 (361)
T ss_dssp EEEEEETTTCCEEEEEEE--E-CSCCCSEEECTTSSEEEEEECC-SSTTCEEEEEEEETTTTEEEEEEEEECS------S
T ss_pred EEEEEeCCCCCEEEeecc--c-CCCCceEEECCCCCEEEEEEcc-CCCCCcEEEEEEeCCCCcEEEeeEeccC------C
Confidence 466677788777765322 1 1111233333 565 5554432 1123578899999876677777655411 1
Q ss_pred CcceEEEEecCCEEEEEEecCCCceEEEEECCCC
Q 038464 340 KKVDINCVAAGHQIFICFNSAELFSYVLCDLVTN 373 (404)
Q Consensus 340 ~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~ 373 (404)
.......+ .++.+|+. +...+.+.+||+.++
T Consensus 100 ~~p~~~~~-dg~~l~~~--~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTA--NYSGGSITVFPIGQD 130 (361)
T ss_dssp SCEEEEEE-CSSEEEEE--ETTTTEEEEEEBCTT
T ss_pred CCcEEEEE-CCCEEEEE--ECCCCEEEEEEeCCC
Confidence 11111222 55566543 234567889998753
No 90
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=53.82 E-value=41 Score=29.44 Aligned_cols=64 Identities=6% Similarity=-0.037 Sum_probs=36.9
Q ss_pred eeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecCCCceEEEEECCCCceEEC
Q 038464 308 SASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVTNEWVEL 378 (404)
Q Consensus 308 ~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~~ 378 (404)
...+.+|.+|..+++++.+..... .......++..++++|+....+..+.+.+||+++++++.+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~-------~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAA-------TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEE-------CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeec-------cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEe
Confidence 457889999997777776543321 0111123344455565543222346788888877766544
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=53.78 E-value=1.1e+02 Score=26.27 Aligned_cols=24 Identities=8% Similarity=-0.123 Sum_probs=13.8
Q ss_pred cCCEEEEEEecCCCceEEEEECCCCc
Q 038464 349 AGHQIFICFNSAELFSYVLCDLVTNE 374 (404)
Q Consensus 349 ~~~~i~v~~~~~~~~~~~~yd~~~~~ 374 (404)
.++..++... .++.+.+||+++++
T Consensus 316 ~dg~~l~sgs--~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 316 ADGQTLFAGY--TDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSSEEEEEE--TTSCEEEEEEEC--
T ss_pred CCCCEEEEEe--CCCEEEEEeCCCcC
Confidence 4444433332 35789999998864
No 92
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=53.72 E-value=2.2e+02 Score=30.04 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=35.2
Q ss_pred cCceEEEEe-CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 113 SGGLVCFRT-ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 113 ~~Glv~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
.+|-.++.+ ....+.+||..+++...+.... .....+++. + +.+++..+. ...+.+||..++.
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----~~v~~~~~~---~---~~~l~~~~~---dg~v~vwd~~~~~ 1076 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQ-----ETVKDFRLL---Q---DSRLLSWSF---DGTVKVWNVITGR 1076 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEETTTTEEECCBCCS-----SCEEEEEEC---S---SSEEEEEES---SSEEEEEETTTTC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEecCC-----CcEEEEEEc---C---CCcEEEEEC---CCcEEEEECCCCc
Confidence 344434443 4678999999998877544222 112223222 1 334544332 3579999998765
No 93
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=53.40 E-value=78 Score=31.28 Aligned_cols=75 Identities=16% Similarity=0.150 Sum_probs=37.1
Q ss_pred eEeeCCeEEEEEeeeccceeeEEEEEEeC--CCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC---CCce
Q 038464 290 VVECRGELLVVVLSEFLESASLRVWRFDQ--DNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA---ELFS 364 (404)
Q Consensus 290 lv~~~g~L~~v~~~~~~~~~~~~vw~l~~--~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~---~~~~ 364 (404)
++..+|+||+.... .. |..+|. .+..|+....-+... . ....... ..++.||+..... ..+.
T Consensus 113 ~~~~~~~v~v~~~d-----g~--l~alD~~tG~~~W~~~~~~~~~~---~-~~~~~P~--v~~~~v~vg~~~~~~~~~g~ 179 (668)
T 1kv9_A 113 VALWGDKVYVGTLD-----GR--LIALDAKTGKAIWSQQTTDPAKP---Y-SITGAPR--VVKGKVIIGNGGAEYGVRGF 179 (668)
T ss_dssp CEEEBTEEEEECTT-----SE--EEEEETTTCCEEEEEECSCTTSS---C-BCCSCCE--EETTEEEECCBCTTTCCBCE
T ss_pred eEEECCEEEEEcCC-----CE--EEEEECCCCCEeeeeccCCCCCc---c-eecCCCE--EECCEEEEeCCCCCcCCCCE
Confidence 45567888764321 12 555564 444587643211100 0 1111111 2367776532211 1468
Q ss_pred EEEEECCCCc--eEE
Q 038464 365 YVLCDLVTNE--WVE 377 (404)
Q Consensus 365 ~~~yd~~~~~--w~~ 377 (404)
+.+||.++++ |+.
T Consensus 180 v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 180 VSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 9999999875 653
No 94
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=52.22 E-value=1.9e+02 Score=28.88 Aligned_cols=263 Identities=12% Similarity=0.116 Sum_probs=123.2
Q ss_pred eeeeecCCCceeeccCCC---C---CCCeeEEE-ecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEE
Q 038464 85 SIVFDSAEKTWKELNFPN---S---SPDSIPVA-ASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMT 157 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~---~---~~~~~~~~-s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~ 157 (404)
...||+..+++..+.... . ......+. -.+|.+.+.... .+.++|+.++++..+...+.....-....+..+
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 315 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSI 315 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEE
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEE
Confidence 456788777666554321 0 11122222 236777665543 789999999988776543210000000111111
Q ss_pred ecCCCCCceEEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCcc--ccCCeEEEeec-CCceeeeccc
Q 038464 158 TSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHH--DDEDAVYFLSK-AGNVVATNMQ 234 (404)
Q Consensus 158 g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v--~~~G~ly~~~~-~~~~~~~~~~ 234 (404)
-.|. +..+.+ |.. ...+..|+..++.++.... .+.. . ..+-.....+ .-+|.+ |++. .+++..+|..
T Consensus 316 ~~D~---~g~lWi-gt~--~~Gl~~~~~~~~~~~~~~~-~~~~-~-~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 316 FMDS---QGGMWL-GTY--FGGLNYYHPIRNRFKNIRN-IPYK-N-SLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPI 385 (795)
T ss_dssp EECT---TSCEEE-EES--SSCEEEECGGGGSSEEECC-CTTS-S-SCSCSSEEEEEECTTSCE-EEEESSSCEEEECTT
T ss_pred EEeC---CcCEEE-EEC--CCCeEEeCCCcccceEEcC-CCCC-C-CCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCC
Confidence 2232 223333 211 1346777776666554432 1100 0 0000000111 235666 4443 3456666654
Q ss_pred CCCccccc-------------ce--eeecCCceE-EEEeccCCeEEEEecCCCceeeccccCCcccccc-ceeEe-eCCe
Q 038464 235 RSPSKQYS-------------SV--ITSKDGEEI-VYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYS-IDVVE-CRGE 296 (404)
Q Consensus 235 ~~~~~~~~-------------~~--~~~~~~~~~-~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~-~~lv~-~~g~ 296 (404)
......|. .+ +.. +..+. +++-...+.+..||..++.+..+....+...... ..+.+ .+|+
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 464 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYV-DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN 464 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEE-ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEE-cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC
Confidence 32222221 11 111 22234 6665555789999999988877642111100011 12333 3678
Q ss_pred EEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE--ecCCEEEEEEecCCCceEEEEECCCCc
Q 038464 297 LLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV--AAGHQIFICFNSAELFSYVLCDLVTNE 374 (404)
Q Consensus 297 L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~~~~~~~~~~~~yd~~~~~ 374 (404)
|++.... .++.+++.+.+|+......... .+ . ...+.++ ..++.++| ... ..+..||.++++
T Consensus 465 lwigt~~--------Gl~~~~~~~~~~~~~~~~~~~~--~~-~-~~~i~~i~~d~~g~lWi--gt~--~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 465 LWLGTLS--------ALVRFNPEQRSFTTIEKEKDGT--PV-V-SKQITTLFRDSHKRLWI--GGE--EGLSVFKQEGLD 528 (795)
T ss_dssp EEEEESS--------CEEEEETTTTEEEECCBCTTCC--BC-C-CCCEEEEEECTTCCEEE--EES--SCEEEEEEETTE
T ss_pred EEEEecC--------ceeEEeCCCCeEEEcccccccc--cc-C-CceEEEEEECCCCCEEE--EeC--CceEEEeCCCCe
Confidence 7764421 2777788777888765331000 00 0 1122232 34567754 322 568889988887
Q ss_pred e
Q 038464 375 W 375 (404)
Q Consensus 375 w 375 (404)
+
T Consensus 529 ~ 529 (795)
T 4a2l_A 529 I 529 (795)
T ss_dssp E
T ss_pred E
Confidence 7
No 95
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=48.50 E-value=1.3e+02 Score=25.87 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 122 ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 122 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
....+.+||..+++....-... .....++++ .+ +.+.++.++. ...+.+||..++.-
T Consensus 52 ~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~---~~---~~~~l~s~~~--dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTLDGH----TGTIWSIDV---DC---FTKYCVTGSA--DYSIKLWDVSNGQC 108 (369)
T ss_dssp SSSCEEEEETTTCCEEEEECCC----SSCEEEEEE---CT---TSSEEEEEET--TTEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCchhhhhhhhc----CCcEEEEEE---cC---CCCEEEEEeC--CCeEEEEECCCCcE
Confidence 3567889998887654322111 112223322 22 1223333332 35799999987653
No 96
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=47.26 E-value=7.7 Score=23.10 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=17.0
Q ss_pred CCCcccChHHHHHHHHhcCChh
Q 038464 19 SFSMEELNQDLLERVLSWLPTS 40 (404)
Q Consensus 19 ~~~~~~LP~dll~~Il~rLp~~ 40 (404)
+..+..||.||.++||+.-...
T Consensus 18 ~eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 18 QEVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp GGGTTTSCHHHHHHHTTCCCSC
T ss_pred HHHHHHCcHHHHHHHHhcchHH
Confidence 3457789999999999876543
No 97
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=46.57 E-value=1.1e+02 Score=30.38 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=18.5
Q ss_pred cCCEEEEEEecC---CCceEEEEECCCCc--eEE
Q 038464 349 AGHQIFICFNSA---ELFSYVLCDLVTNE--WVE 377 (404)
Q Consensus 349 ~~~~i~v~~~~~---~~~~~~~yd~~~~~--w~~ 377 (404)
.++.+|+..... ..+.+.+||.++++ |+.
T Consensus 166 ~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 166 VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 377776522111 24689999999876 654
No 98
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=46.13 E-value=2.3e+02 Score=28.02 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=55.6
Q ss_pred CeEEEEecCC--CceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhc
Q 038464 261 GTIVACNLTQ--KSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFY 338 (404)
Q Consensus 261 ~~i~~fD~~~--~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~ 338 (404)
..|..+|+++ +.|..+- |.....-..+...+++|++....+ ....||.++.....-..+ .+|.
T Consensus 341 ~~l~~~d~~~~~~~~~~l~---~~~~~~l~~~~~~~~~lv~~~~~d----g~~~l~~~~~~g~~~~~l-~~~~------- 405 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVV---PESKDNLESVGIAGNRLFASYIHD----AKSQVLAFDLDGKPAGAV-SLPG------- 405 (741)
T ss_dssp CEEEEEECSSSSCEEEEEE---CCCSSEEEEEEEEBTEEEEEEEET----TEEEEEEEETTSCEEEEC-BCSS-------
T ss_pred CEEEEEeCCCCccccEEEe---cCCCCeEEEEEEECCEEEEEEEEC----CEEEEEEEeCCCCceeec-cCCC-------
Confidence 3699999987 5788762 222111112334477877665432 345688887533222222 2221
Q ss_pred cCcceEEEEe---cCCEEEEEEec-CCCceEEEEECCCCceEECCC
Q 038464 339 GKKVDINCVA---AGHQIFICFNS-AELFSYVLCDLVTNEWVELPK 380 (404)
Q Consensus 339 ~~~~~~~~~~---~~~~i~v~~~~-~~~~~~~~yd~~~~~w~~~~~ 380 (404)
...+..+. .++.+++...+ ..+..++.||+.+++.+.+..
T Consensus 406 --~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 406 --IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp --SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred --CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 11122222 34566655444 235688999999988877754
No 99
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=45.84 E-value=1.4e+02 Score=25.36 Aligned_cols=193 Identities=10% Similarity=0.038 Sum_probs=0.0
Q ss_pred EecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 111 AASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 111 ~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
++..|-+++.+. ...++++|+.|++-..--+.+ .....+.+.+.. +.++++ ... ..+..||. ++.
T Consensus 1 ~~~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~---~~~~~~~~~~~p------dG~ilv-s~~---~~V~~~d~-~G~ 66 (276)
T 3no2_A 1 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLE---KGWECNSVAATK------AGEILF-SYS---KGAKMITR-DGR 66 (276)
T ss_dssp --CCCEEEEECTTCSEEEEEETTTTEEEEEEECC---TTCCCCEEEECT------TSCEEE-ECB---SEEEEECT-TSC
T ss_pred CCCCCcEEEeeCCCCEEEEEECCCCeEEEEeCCC---ccCCCcCeEECC------CCCEEE-eCC---CCEEEECC-CCC
Q ss_pred --eeecccccccccccccccccCCccccCCeEEEeecC-CceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEE
Q 038464 190 --WEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKA-GNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVAC 266 (404)
Q Consensus 190 --W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~f 266 (404)
|+.-.. -...... .....||.+++.... .+ .++.+
T Consensus 67 ~~W~~~~~-~~~~~~~-------~~~~~dG~~lv~~~~~~~----------------------------------~v~~v 104 (276)
T 3no2_A 67 ELWNIAAP-AGCEMQT-------ARILPDGNALVAWCGHPS----------------------------------TILEV 104 (276)
T ss_dssp EEEEEECC-TTCEEEE-------EEECTTSCEEEEEESTTE----------------------------------EEEEE
T ss_pred EEEEEcCC-CCccccc-------cEECCCCCEEEEecCCCC----------------------------------EEEEE
Q ss_pred ecCCCceeeccccCC---ccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcce
Q 038464 267 NLTQKSFTEYPRLLP---VFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVD 343 (404)
Q Consensus 267 D~~~~~w~~i~~~~p---~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~ 343 (404)
|...+.-..+..... ........-...+|.++++...+ ..+.+|..+ .+..|+.-.. ....
T Consensus 105 d~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~----~~v~~~d~~-G~~~w~~~~~-----------~~~~ 168 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT----SEVREIAPN-GQLLNSVKLS-----------GTPF 168 (276)
T ss_dssp CTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT----TEEEEECTT-SCEEEEEECS-----------SCCC
T ss_pred eCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC----CEEEEECCC-CCEEEEEECC-----------CCcc
Q ss_pred EEEEecCCEEEEEEecCCCceEEEEECCCCceEE
Q 038464 344 INCVAAGHQIFICFNSAELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 344 ~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~~w~~ 377 (404)
-..+..++.+ ++.+.....+.++|+++++..+
T Consensus 169 ~~~~~~~g~~--~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 169 SSAFLDNGDC--LVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EEEECTTSCE--EEECBTTSEEEEECTTTCCEEE
T ss_pred ceeEcCCCCE--EEEeCCCCeEEEEeCcCCcEEE
No 100
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=44.85 E-value=1.4e+02 Score=24.95 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=47.9
Q ss_pred ceeeeecCCCceeeccCCCCCCCeeEE-EecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCC
Q 038464 84 HSIVFDSAEKTWKELNFPNSSPDSIPV-AASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSK 161 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~~~~~~~~~-~s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~ 161 (404)
....+|+. ++...+..+........+ ...+|.+++... ...++++|+. ++...+.... ......+++. ++
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~---~~ 108 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPN---PDSAPYGITE---GP 108 (299)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEE---CT
T ss_pred cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCC---cCCCceeeEE---CC
Confidence 34577777 666655543221222223 335677777765 5679999986 5554433211 1111223322 22
Q ss_pred CCCceEEEEEecccCceEEEEEeCCCCceee
Q 038464 162 NPSNYKLVLVYGELPKLSFKVYNSCLNCWEE 192 (404)
Q Consensus 162 ~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~ 192 (404)
+.++++.... ...+.+|+. ++....
T Consensus 109 ---~g~l~v~~~~--~~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 109 ---NGDIWFTEMN--GNRIGRITD-DGKIRE 133 (299)
T ss_dssp ---TSCEEEEETT--TTEEEEECT-TCCEEE
T ss_pred ---CCCEEEEecC--CceEEEECC-CCCEEE
Confidence 2346654321 346778888 555443
No 101
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=44.22 E-value=2.3e+02 Score=27.35 Aligned_cols=81 Identities=15% Similarity=0.099 Sum_probs=43.9
Q ss_pred CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHH-HHhccCcceEEEEecCCEEEEEEecCCCceEEEEECCC
Q 038464 294 RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMS-HEFYGKKVDINCVAAGHQIFICFNSAELFSYVLCDLVT 372 (404)
Q Consensus 294 ~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~ 372 (404)
+|+++++...+ ....||.++..+.+++++........ ..+ ........+..++.+++.... ....++.+|+++
T Consensus 252 dg~l~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 252 DGSLIVATDRT----GWWNLHRVDPATGAATQLCRREEEFAGPLW-TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp TSCEEEEECTT----SSCEEEEECTTTCCEEESSCCSSBSSCCCC-STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CCeEEEEECCC----CCeEEEEEECCCCceeecccccccccCccc-cccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 78876555322 24569998886678887765432110 000 000011223345666544444 455677779888
Q ss_pred CceEECCC
Q 038464 373 NEWVELPK 380 (404)
Q Consensus 373 ~~w~~~~~ 380 (404)
++.+.+..
T Consensus 326 ~~~~~l~~ 333 (662)
T 3azo_A 326 GELVDAAG 333 (662)
T ss_dssp TEEEECCS
T ss_pred CcEEEecC
Confidence 88777643
No 102
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=43.39 E-value=1.6e+02 Score=25.48 Aligned_cols=22 Identities=14% Similarity=-0.073 Sum_probs=13.9
Q ss_pred CceEEEEe-CCCeEEEEcCCCCC
Q 038464 114 GGLVCFRT-ASGKFIVSNPVTGS 135 (404)
Q Consensus 114 ~Glv~~~~-~~~~~~v~NP~t~~ 135 (404)
+|-.++.+ ....+.+||..+++
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCS
T ss_pred CCCEEEEEeCCCeEEEEECccCC
Confidence 44444443 36788999987754
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=43.18 E-value=1.7e+02 Score=25.76 Aligned_cols=26 Identities=12% Similarity=-0.032 Sum_probs=16.0
Q ss_pred ecCCEEEEEEecCCCceEEEEECCCCce
Q 038464 348 AAGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 348 ~~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
..++..++... .++.+.+||+++++-
T Consensus 278 Spdg~~lasgs--~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 278 DMKGELAVLAS--NDNSIALVKLKDLSM 303 (365)
T ss_dssp CTTSCEEEEEE--TTSCEEEEETTTTEE
T ss_pred CCCCCceEEEc--CCCEEEEEECCCCcE
Confidence 34455433322 356789999998764
No 104
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=42.97 E-value=1.5e+02 Score=24.77 Aligned_cols=95 Identities=12% Similarity=0.061 Sum_probs=48.3
Q ss_pred eeeeecCCCceeeccCCCCCCCeeEEE-ecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCC
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSIPVA-ASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKN 162 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~~~~-s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~ 162 (404)
...||+. ++...+..+........++ ..+|.+++... ...++++|+. ++........ ......+++ .++
T Consensus 85 v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~---~d~- 155 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPN---KGSYPAFIT---LGS- 155 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEE---ECT-
T ss_pred EEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCC---CCCCceeEE---ECC-
Confidence 4567777 5555554442212222233 34677777765 5689999998 6655432111 111112232 232
Q ss_pred CCceEEEEEecccCceEEEEEeCCCCceeec
Q 038464 163 PSNYKLVLVYGELPKLSFKVYNSCLNCWEEE 193 (404)
Q Consensus 163 ~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~ 193 (404)
+.++++... ....+.+|+. ++.....
T Consensus 156 --~g~l~v~~~--~~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 156 --DNALWFTEN--QNNSIGRITN-TGKLEEY 181 (300)
T ss_dssp --TSSEEEEET--TTTEEEEECT-TCCEEEE
T ss_pred --CCCEEEEec--CCCeEEEECC-CCcEEEe
Confidence 233665432 1346888888 6665543
No 105
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=42.33 E-value=1.2e+02 Score=29.19 Aligned_cols=113 Identities=16% Similarity=0.057 Sum_probs=56.1
Q ss_pred ccccCCeEEEeec-CCceeeecc-cCCCcc-cc-----------------cceeeecCCceEEEEeccCCeEEEEecCCC
Q 038464 212 HHDDEDAVYFLSK-AGNVVATNM-QRSPSK-QY-----------------SSVITSKDGEEIVYFLNSCGTIVACNLTQK 271 (404)
Q Consensus 212 ~v~~~G~ly~~~~-~~~~~~~~~-~~~~~~-~~-----------------~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~ 271 (404)
++..+|.+|+.+. .+.+.++|. ..+... .+ ...+... +..+|+......+.++|.++.
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~dg~l~alD~~tG 135 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTG 135 (571)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTC
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeCCCEEEEEECCCC
Confidence 4667888887766 566777776 321100 00 0111222 347888777789999999765
Q ss_pred c--eeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeC--CCCCeEEec
Q 038464 272 S--FTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQ--DNGFWHQIA 327 (404)
Q Consensus 272 ~--w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~--~~~~W~~v~ 327 (404)
+ |+.-....+.........+..+|++|+.....+.. ..-.|+.+|. .+..|+.-.
T Consensus 136 ~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~-~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 136 KINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG-VRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT-CCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC-CCCEEEEEECCCCcEEEEEcc
Confidence 4 87421110100011122234578877644321100 0112555555 444577543
No 106
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=42.07 E-value=1.8e+02 Score=25.68 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=44.5
Q ss_pred eEEEEecCCCceeec-cccCCccccccc-eeEe--eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHh
Q 038464 262 TIVACNLTQKSFTEY-PRLLPVFSEYSI-DVVE--CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEF 337 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i-~~~~p~~~~~~~-~lv~--~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~ 337 (404)
.|..+|+.+..-... ....+....... .+.. .++.+++.+..+ ..+.+|.+......-....
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D----~~v~~wd~~~~~~~~~~~~---------- 246 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD----TTVRLWDLRITSRAVRTYH---------- 246 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT----SCEEEEETTTTCCCCEEEC----------
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC----CeEEEEECCCCCcceEEEC----------
Confidence 577788876653322 111121111111 1221 266776666543 5788997653221111111
Q ss_pred ccCcceEEE--EecCCEEEEEEecCCCceEEEEECCCCce
Q 038464 338 YGKKVDINC--VAAGHQIFICFNSAELFSYVLCDLVTNEW 375 (404)
Q Consensus 338 ~~~~~~~~~--~~~~~~i~v~~~~~~~~~~~~yd~~~~~w 375 (404)
+....+.+ +..++..++. +..++.+.+||+++++-
T Consensus 247 -~h~~~v~~v~~~p~~~~l~s--~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 247 -GHEGDINSVKFFPDGQRFGT--GSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp -CCSSCCCEEEECTTSSEEEE--ECSSSCEEEEETTTTEE
T ss_pred -CcCCCeEEEEEecCCCeEEE--EcCCCeEEEEECCCCcE
Confidence 11112222 2334444332 23467788999988654
No 107
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=41.99 E-value=1.6e+02 Score=24.88 Aligned_cols=55 Identities=9% Similarity=0.015 Sum_probs=32.0
Q ss_pred ceeeeecCCCceeeccCCC----CCCCeeEEEecC-ceEEEEeCCCeEEEEcCCCCCeeeC
Q 038464 84 HSIVFDSAEKTWKELNFPN----SSPDSIPVAASG-GLVCFRTASGKFIVSNPVTGSSREL 139 (404)
Q Consensus 84 ~~~~~d~~~~~w~~l~~p~----~~~~~~~~~s~~-Glv~~~~~~~~~~v~NP~t~~w~~l 139 (404)
....+|+.++++..+..+. ...........+ |.+++......++++|+. ++...+
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence 3456777776666554321 011112122345 777777655589999998 877665
No 108
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=41.93 E-value=1.6e+02 Score=24.99 Aligned_cols=66 Identities=9% Similarity=-0.050 Sum_probs=38.4
Q ss_pred CceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceee
Q 038464 114 GGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEE 192 (404)
Q Consensus 114 ~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~ 192 (404)
+|.+++... ...++.+||.+++...+.... . ..+++ .++. .++++.. ...+.+||.+++.++.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~-~~~i~---~~~d---G~l~v~~----~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----P-VSSVA---LRQS---GGYVATI----GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-----C-EEEEE---EBTT---SSEEEEE----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----c-eEEEE---ECCC---CCEEEEE----CCeEEEEECCCCcEEE
Confidence 455555554 668899999988765443211 1 12232 2332 2344432 2478899999988876
Q ss_pred ccc
Q 038464 193 ETL 195 (404)
Q Consensus 193 ~~~ 195 (404)
+..
T Consensus 88 ~~~ 90 (297)
T 3g4e_A 88 LAT 90 (297)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 109
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=41.67 E-value=1.7e+02 Score=25.29 Aligned_cols=54 Identities=19% Similarity=0.165 Sum_probs=27.8
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCC
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLN 188 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~ 188 (404)
...+.+||..+++....-+.. .....++ .+.+ +.+.++.++. ...+.+|+..++
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~----~~~v~~~---~~s~---~~~~l~s~~~--d~~v~iw~~~~~ 129 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLR----SSWVMTC---AYAP---SGNYVACGGL--DNICSIYNLKTR 129 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECS----SSCEEEE---EECT---TSSEEEEEET--TCEEEEEETTTC
T ss_pred CCcEEEEECCCCCcceEeecC----CccEEEE---EECC---CCCEEEEEeC--CCeEEEEECccC
Confidence 567889998887644222222 1112222 2222 2233444433 357889998764
No 110
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=41.64 E-value=2.5e+02 Score=27.06 Aligned_cols=100 Identities=14% Similarity=0.021 Sum_probs=52.0
Q ss_pred eEEEEecCCCceeeccccCCccc---ccc---ceeEee-CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHH
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFS---EYS---IDVVEC-RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMS 334 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~---~~~---~~lv~~-~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~ 334 (404)
.|..+|+++..+..+.. ..... .+. ..++.. +|++++.... ....||.++..+.....+..-.
T Consensus 266 ~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~d~~~~~~~~l~~~~---- 335 (662)
T 3azo_A 266 NLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-----GAAVLGILDPESGELVDAAGPW---- 335 (662)
T ss_dssp EEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-----SSCEEEEEETTTTEEEECCSSC----
T ss_pred EEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCEEEEEEEc-----CccEEEEEECCCCcEEEecCCC----
Confidence 57778887777776521 11100 000 123333 6777665431 4567999987655554442111
Q ss_pred HHhccCcceEEE--EecCCEEEEEEec-CCCceEEEEECCCCceEEC
Q 038464 335 HEFYGKKVDINC--VAAGHQIFICFNS-AELFSYVLCDLVTNEWVEL 378 (404)
Q Consensus 335 ~~~~~~~~~~~~--~~~~~~i~v~~~~-~~~~~~~~yd~~~~~w~~~ 378 (404)
..+.. ...++.+++...+ .....++.+|+++++.+.+
T Consensus 336 -------~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 336 -------TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp -------CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred -------CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 11111 2345666544333 2235678889888877665
No 111
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=40.76 E-value=2.9e+02 Score=27.58 Aligned_cols=265 Identities=10% Similarity=0.110 Sum_probs=127.6
Q ss_pred eeeeecCCCceeeccCCCCCCCee-EEEecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCC---CCCCCceeEEEEEecC
Q 038464 85 SIVFDSAEKTWKELNFPNSSPDSI-PVAASGGLVCFRTASGKFIVSNPVTGSSRELPPLDA---DTENQSLHAIVMTTSS 160 (404)
Q Consensus 85 ~~~~d~~~~~w~~l~~p~~~~~~~-~~~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~---~~~~~~~~~~~~~g~~ 160 (404)
...||+..+++..+.......... .+.-.+|.+.+......++++|+.++++........ .-......+ +. .|
T Consensus 195 l~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~--i~-~d 271 (795)
T 4a2l_A 195 LYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRS--LA-MD 271 (795)
T ss_dssp EEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEE--EE-EC
T ss_pred EEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEE--EE-Ec
Confidence 456788777766553211111122 223346777776545579999999988776543210 000111112 22 12
Q ss_pred CCCCceEEEEEecccCceEEEEEeCCCCceeecccccccccccccccccCCcc--ccCCeEEEeec-CCceeeecccCCC
Q 038464 161 KNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHH--DDEDAVYFLSK-AGNVVATNMQRSP 237 (404)
Q Consensus 161 ~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v--~~~G~ly~~~~-~~~~~~~~~~~~~ 237 (404)
. +..+.+ +.. ..+.+|+..++.++.... .+..+. ..+-.....+ .-+|.+ |++. .+++..+++....
T Consensus 272 ~---~g~lWi-gt~---~Gl~~~~~~~~~~~~~~~-~~~~~~-~l~~~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 272 S---QNRLWI-GTF---NDLNIYHEGTDSFASYSS-NPVENG-SLSQRSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp T---TSCEEE-EES---SCEEEEETTTTEEEEECC-CTTSTT-SCSSSCEEEEEECTTSCE-EEEESSSCEEEECGGGGS
T ss_pred C---CCCEEE-EeC---ChhheEcCCCCeEEEEec-CCCCCC-CCCCCcEEEEEEeCCcCE-EEEECCCCeEEeCCCccc
Confidence 2 233333 222 257889999888876643 111000 0000000111 235666 4443 3455555543221
Q ss_pred cccc-----------cceee-ecCCceEEEEeccCCeEEEEecCCCceeeccccC--Cc-cc-ccc-ceeEe-eCCe-EE
Q 038464 238 SKQY-----------SSVIT-SKDGEEIVYFLNSCGTIVACNLTQKSFTEYPRLL--PV-FS-EYS-IDVVE-CRGE-LL 298 (404)
Q Consensus 238 ~~~~-----------~~~~~-~~~~~~~~y~~~~~~~i~~fD~~~~~w~~i~~~~--p~-~~-~~~-~~lv~-~~g~-L~ 298 (404)
...+ ..+.. ..+..+.+++-...+.+..||..++.+..+.... +. .. ... ..+.+ .+|+ |+
T Consensus 342 ~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lW 421 (795)
T 4a2l_A 342 FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVY 421 (795)
T ss_dssp SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEE
T ss_pred ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEE
Confidence 1111 01111 1233445666555568999999998888763211 00 00 011 23344 3677 66
Q ss_pred EEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEe--cCCEEEEEEecCCCceEEEEECCCCceE
Q 038464 299 VVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVA--AGHQIFICFNSAELFSYVLCDLVTNEWV 376 (404)
Q Consensus 299 ~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~i~v~~~~~~~~~~~~yd~~~~~w~ 376 (404)
+ +... . .++.++..++++......... + . ...+.++. .++.++| ... ..+.+||.++++++
T Consensus 422 i-gt~~----~--Gl~~~d~~~~~~~~~~~~~~~----l-~-~~~v~~i~~d~~g~lwi--gt~--~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 422 I-GTHA----G--GLSILHRNSGQVENFNQRNSQ----L-V-NENVYAILPDGEGNLWL--GTL--SALVRFNPEQRSFT 484 (795)
T ss_dssp E-EETT----T--EEEEEETTTCCEEEECTTTSC----C-S-CSCEEEEEECSSSCEEE--EES--SCEEEEETTTTEEE
T ss_pred E-EeCc----C--ceeEEeCCCCcEEEeecCCCC----c-C-CCeeEEEEECCCCCEEE--Eec--CceeEEeCCCCeEE
Confidence 5 3221 1 267778776677766432111 1 1 11233332 3567754 332 56899999999998
Q ss_pred ECC
Q 038464 377 ELP 379 (404)
Q Consensus 377 ~~~ 379 (404)
...
T Consensus 485 ~~~ 487 (795)
T 4a2l_A 485 TIE 487 (795)
T ss_dssp ECC
T ss_pred Ecc
Confidence 765
No 112
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=40.66 E-value=1.7e+02 Score=24.90 Aligned_cols=65 Identities=6% Similarity=-0.141 Sum_probs=36.8
Q ss_pred CceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 114 GGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 114 ~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
.+.+++... .+.+.+||+.+++....-..+ .. . ..++ +++. .-.+++.... ...+.+||..++.-
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~-~-~~~~---~s~d--g~~l~~~~~~--~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG---YD-F-VDTA---ITSD--CSNVVVTSDF--CQTLVQIETQLEPP 74 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC---CC-E-EEEE---ECSS--SCEEEEEEST--TCEEEEEECSSSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc---CC-c-ceEE---EcCC--CCEEEEEeCC--CCeEEEEECCCCce
Confidence 455555554 668999999999875433332 11 1 1232 2222 2245555432 34789999988764
No 113
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=38.49 E-value=2.1e+02 Score=25.21 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=16.0
Q ss_pred ceEEEEeCCCeEEEEcCCCCCeee
Q 038464 115 GLVCFRTASGKFIVSNPVTGSSRE 138 (404)
Q Consensus 115 Glv~~~~~~~~~~v~NP~t~~w~~ 138 (404)
..++..+....+.+||..+++...
T Consensus 162 ~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 162 THIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp SEEEEEETTCCEEEEETTTTEEEE
T ss_pred CEEEEEecCCeEEEEECCCCcEEE
Confidence 344444446788999998877543
No 114
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=38.15 E-value=1.9e+02 Score=27.75 Aligned_cols=112 Identities=14% Similarity=0.149 Sum_probs=58.4
Q ss_pred ceEEEEecc-CCeEEEEec-CCC--ceeeccccCCccc-------cccceeEeeCCeEEEEEeeeccceeeEEEEEEeC-
Q 038464 251 EEIVYFLNS-CGTIVACNL-TQK--SFTEYPRLLPVFS-------EYSIDVVECRGELLVVVLSEFLESASLRVWRFDQ- 318 (404)
Q Consensus 251 ~~~~y~~~~-~~~i~~fD~-~~~--~w~~i~~~~p~~~-------~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~- 318 (404)
+..+|+... .+.+.++|. ++. .|+.-.. .+... .....++..+|+||+.... . .++.+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-----g--~l~alD~~ 133 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPK-QDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-----G--HLLALDAK 133 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCC-CCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----S--EEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCC-CCccccccccccccccccEEECCEEEEEeCC-----C--EEEEEECC
Confidence 347888877 678999998 654 4885311 11000 0112345678888875321 1 2566665
Q ss_pred -CCCCeEEeccCChhHHHHhccCcceEEEEecCCEEEEEEecC---CCceEEEEECCCCc--eE
Q 038464 319 -DNGFWHQIAAMPPAMSHEFYGKKVDINCVAAGHQIFICFNSA---ELFSYVLCDLVTNE--WV 376 (404)
Q Consensus 319 -~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~---~~~~~~~yd~~~~~--w~ 376 (404)
.+..|+.-..-+.. .. ....... ..++.||+..... ..+.+.+||.++++ |+
T Consensus 134 tG~~~W~~~~~~~~~---~~-~~~~~P~--v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 134 TGKINWEVEVCDPKV---GS-TLTQAPF--VAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TCCEEEEEECCCGGG---TC-BCCSCCE--EETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCCEEEEecCCCCCc---cc-eeccCCE--EECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 44468754221100 00 1111111 2367786532211 14689999999865 64
No 115
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=37.52 E-value=2.1e+02 Score=25.04 Aligned_cols=63 Identities=6% Similarity=-0.016 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecc
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEET 194 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~ 194 (404)
...+.+||..+++....-.... ......++++. +.+.+.++.++. ...+.+||..++......
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~-----~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~ 157 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFN-----QFNTNQLFVSSI--RGATTLRDFSGSVIQVFA 157 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEE-----TTEEEEEEEEET--TTEEEEEETTSCEEEEEE
T ss_pred CCeEEEEeCCCcccceeeecCC--cCCceeEEEeC-----CCCCCEEEEEeC--CCEEEEEECCCCceEEEe
Confidence 5567899998887664433210 12222333332 113344554432 357899999876554443
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=37.41 E-value=1.9e+02 Score=24.45 Aligned_cols=73 Identities=10% Similarity=0.093 Sum_probs=34.0
Q ss_pred cCceEEEEeCCCeEEEEcCCCCCee-eCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCcee
Q 038464 113 SGGLVCFRTASGKFIVSNPVTGSSR-ELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 113 ~~Glv~~~~~~~~~~v~NP~t~~w~-~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
.+|-+++.+....+.+||..+++.. .+.............++++ .+ +.+.+++++. ...+.+||..++...
T Consensus 61 ~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~---~~~~l~~~~~--d~~i~~~d~~~~~~~ 132 (337)
T 1gxr_A 61 NPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL---LP---DGCTLIVGGE--ASTLSIWDLAAPTPR 132 (337)
T ss_dssp SSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE---CT---TSSEEEEEES--SSEEEEEECCCC--E
T ss_pred cCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEE---cC---CCCEEEEEcC--CCcEEEEECCCCCcc
Confidence 3444444444678899998876532 1111110001122222322 22 2223333332 357999999887754
Q ss_pred ec
Q 038464 192 EE 193 (404)
Q Consensus 192 ~~ 193 (404)
..
T Consensus 133 ~~ 134 (337)
T 1gxr_A 133 IK 134 (337)
T ss_dssp EE
T ss_pred ee
Confidence 33
No 117
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=37.27 E-value=1.9e+02 Score=24.44 Aligned_cols=22 Identities=9% Similarity=0.128 Sum_probs=14.6
Q ss_pred eEEEEeCCCeEEEEcCCCCCee
Q 038464 116 LVCFRTASGKFIVSNPVTGSSR 137 (404)
Q Consensus 116 lv~~~~~~~~~~v~NP~t~~w~ 137 (404)
+++..+....+.+||..+++..
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCCcEE
Confidence 3433334678899999887643
No 118
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=37.13 E-value=1.9e+02 Score=24.48 Aligned_cols=201 Identities=9% Similarity=-0.003 Sum_probs=0.0
Q ss_pred eEEEecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCC
Q 038464 108 IPVAASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCL 187 (404)
Q Consensus 108 ~~~~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~ 187 (404)
......+.+++..+....+.+||..+++....-... .....++.+.. +.+.++.++. ...+.+||..+
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~----~~~v~~~~~~~------~~~~l~s~s~--d~~i~vwd~~~ 86 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVT----ETPVRAGKFIA------RKNWIIVGSD--DFRIRVFNYNT 86 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC----SSCEEEEEEEG------GGTEEEEEET--TSEEEEEETTT
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeecc----CCcEEEEEEeC------CCCEEEEECC--CCEEEEEECCC
Q ss_pred CceeecccccccccccccccccCCccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEe
Q 038464 188 NCWEEETLLLSRKSEQALEVDSIDHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACN 267 (404)
Q Consensus 188 ~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD 267 (404)
+.-...-..-...... -...-+|...+.++..+ .|..+|
T Consensus 87 ~~~~~~~~~h~~~v~~-------~~~~~~~~~l~sgs~D~----------------------------------~v~lWd 125 (304)
T 2ynn_A 87 GEKVVDFEAHPDYIRS-------IAVHPTKPYVLSGSDDL----------------------------------TVKLWN 125 (304)
T ss_dssp CCEEEEEECCSSCEEE-------EEECSSSSEEEEEETTS----------------------------------CEEEEE
T ss_pred CcEEEEEeCCCCcEEE-------EEEcCCCCEEEEECCCC----------------------------------eEEEEE
Q ss_pred cCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE
Q 038464 268 LTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV 347 (404)
Q Consensus 268 ~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~ 347 (404)
++++.=......-....-........++.+++.+..+ ..+.+|.+............-. .....+...
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D----~~v~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~ 193 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD----RTVKVWSLGQSTPNFTLTTGQE--------RGVNYVDYY 193 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT----SEEEEEETTCSSCSEEEECCCT--------TCEEEEEEC
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC----CeEEEEECCCCCccceeccCCc--------CcEEEEEEE
Q ss_pred ecCCEEEEEEecCCCceEEEEECCCCc
Q 038464 348 AAGHQIFICFNSAELFSYVLCDLVTNE 374 (404)
Q Consensus 348 ~~~~~i~v~~~~~~~~~~~~yd~~~~~ 374 (404)
...+.-++...+ ..+.+.+||+++++
T Consensus 194 ~~~~~~~l~s~s-~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 194 PLPDKPYMITAS-DDLTIKIWDYQTKS 219 (304)
T ss_dssp CSTTCCEEEEEE-TTSEEEEEETTTTE
T ss_pred EcCCCCEEEEEc-CCCeEEEEeCCCCc
No 119
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=35.82 E-value=2.1e+02 Score=24.45 Aligned_cols=64 Identities=14% Similarity=0.017 Sum_probs=39.3
Q ss_pred CceEEEEeC---CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GGLVCFRTA---SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~Glv~~~~~---~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+|.+|+..+ .+.+.++|+.|++-..--+++ ......+++..| -+++++... ...+.+||..+.+
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~g-------~~lyv~t~~--~~~v~viD~~t~~ 97 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLLN-------EKLYQVVWL--KNIGFIYDRRTLS 97 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEET-------TEEEEEETT--CSEEEEEETTTTE
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEeC-------CEEEEEEec--CCEEEEEECCCCc
Confidence 388888764 578999999999855321122 111122444432 367776432 4679999998753
No 120
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=35.76 E-value=2.2e+02 Score=24.75 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=27.7
Q ss_pred CCceeecccc-CCccccccceeEee-CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEecc
Q 038464 270 QKSFTEYPRL-LPVFSEYSIDVVEC-RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAA 328 (404)
Q Consensus 270 ~~~w~~i~~~-~p~~~~~~~~lv~~-~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~ 328 (404)
...|+.+..+ ++.... -..++.. ++.+++++... .|+.-.+...+|+++..
T Consensus 235 G~tW~~~~~~~~~~~~~-~~~v~~~~~~~~~~~g~~g-------~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVG-FLDLAYRTPNEVWLAGGAG-------ALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEEECCCBCTTSSCCSC-EEEEEESSSSCEEEEESTT-------CEEEESSTTSSCEECGG
T ss_pred CCeeEeccCCcccCCcc-eEEEEecCCCEEEEEeCCC-------eEEEeCCCCcccEEcCc
Confidence 5578877543 333111 1223322 67888776421 15655666679998863
No 121
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=35.50 E-value=57 Score=28.77 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=39.7
Q ss_pred eEEEEecCCCceeeccccCCccccccc-eeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhcc
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSI-DVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYG 339 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~-~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~ 339 (404)
.|..||+.+..|..+.. +..+. ..+ .+.. -+|++++.+..+ ..+.||.++... .|.....+. +
T Consensus 34 ~i~iw~~~~~~~~~~~~-~~~h~-~~v~~~~~s~~~~~l~s~s~d----~~v~vwd~~~~~-~~~~~~~~~--------~ 98 (377)
T 3dwl_C 34 QVELYEQDGNGWKHART-FSDHD-KIVTCVDWAPKSNRIVTCSQD----RNAYVYEKRPDG-TWKQTLVLL--------R 98 (377)
T ss_dssp CBCEEEEETTEEEECCC-BCCCS-SCEEEEEECTTTCCEEEEETT----SSEEEC-------CCCCEEECC--------C
T ss_pred EEEEEEccCCceEEEEE-EecCC-ceEEEEEEeCCCCEEEEEeCC----CeEEEEEcCCCC-ceeeeeEec--------c
Confidence 56667887776665532 22211 111 2222 256665555432 568899777643 244443332 1
Q ss_pred CcceEEEEe--cCCEEEEEEecCCCceEEEEECCCCc
Q 038464 340 KKVDINCVA--AGHQIFICFNSAELFSYVLCDLVTNE 374 (404)
Q Consensus 340 ~~~~~~~~~--~~~~i~v~~~~~~~~~~~~yd~~~~~ 374 (404)
....+.++. .++..++... ..+.+.+||+++++
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGS--GARVISVCYFEQEN 133 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEE--SSSCEEECCC----
T ss_pred cCCceEEEEECCCCCEEEEEe--cCCeEEEEEECCcc
Confidence 122233332 2333322222 24567778877654
No 122
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=33.18 E-value=97 Score=22.92 Aligned_cols=40 Identities=8% Similarity=0.051 Sum_probs=25.4
Q ss_pred CeEEEEcCCCC-CeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEe
Q 038464 124 GKFIVSNPVTG-SSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVY 172 (404)
Q Consensus 124 ~~~~v~NP~t~-~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~ 172 (404)
.+++.+||.|+ .|....... ..+ .+-++...+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~--------~~V-~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA--------VTV-SYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC--------EEE-EEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc--------eEE-EEEEcCCCCEEEEEEcc
Confidence 46889999996 997544321 122 33345556679988764
No 123
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=32.84 E-value=3.2e+02 Score=25.78 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=34.0
Q ss_pred CeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCcee
Q 038464 124 GKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 124 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
..++++|+.+++.+.|.... ......+ + .+ +.+.++.........+.+||.+++..+
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~-----~~~~~~~-~--Sp---DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGE-----GSFSSAS-I--SP---GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEETTTCCCEEECCSS-----CEEEEEE-E--CT---TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred eEEEEEcCCCCCceEeecCC-----Cccccce-E--CC---CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 56999999999988774332 1112222 2 22 233333333333457999999998877
No 124
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=32.61 E-value=2.5e+02 Score=24.37 Aligned_cols=63 Identities=8% Similarity=-0.031 Sum_probs=30.1
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecc
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEET 194 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~ 194 (404)
...+.+||..++++......... ......+++ +.+ +.+.++.++. ...+.+|+..++.+..+.
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~---~sp---~g~~l~s~s~--D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEG-HQRTVRKVA---WSP---CGNYLASASF--DATTCIWKKNQDDFECVT 99 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSS-CSSCEEEEE---ECT---TSSEEEEEET--TSCEEEEEECCC-EEEEE
T ss_pred CCeEEEEEcCCCcceeeeeeccc-cCCcEEEEE---ECC---CCCEEEEEEC--CCcEEEEEccCCCeEEEE
Confidence 56778899888776432211100 112222332 222 2223444332 345788888777665443
No 125
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=32.12 E-value=2.8e+02 Score=24.94 Aligned_cols=66 Identities=9% Similarity=0.009 Sum_probs=33.4
Q ss_pred cCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCC
Q 038464 113 SGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLN 188 (404)
Q Consensus 113 ~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~ 188 (404)
.+|-.++.+. ...+.+||..++....+..... ......++.+. + +.++++.++. ...+.+||..++
T Consensus 175 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~---~---~~~~l~~g~~--dg~i~~wd~~~~ 241 (435)
T 4e54_B 175 LNTNQFYASSMEGTTRLQDFKGNILRVFASSDT--INIWFCSLDVS---A---SSRMVVTGDN--VGNVILLNMDGK 241 (435)
T ss_dssp SCTTEEEEECSSSCEEEEETTSCEEEEEECCSS--CSCCCCCEEEE---T---TTTEEEEECS--SSBEEEEESSSC
T ss_pred CCCCEEEEEeCCCEEEEeeccCCceeEEeccCC--CCccEEEEEEC---C---CCCEEEEEeC--CCcEeeeccCcc
Confidence 3554444443 6778999988776554433321 11111222221 1 2334555433 346888887653
No 126
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=31.93 E-value=2.3e+02 Score=23.85 Aligned_cols=65 Identities=9% Similarity=0.179 Sum_probs=35.9
Q ss_pred CeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEe--cC---CEEEEEEecCCCceEEEEE
Q 038464 295 GELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVA--AG---HQIFICFNSAELFSYVLCD 369 (404)
Q Consensus 295 g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~--~~---~~i~v~~~~~~~~~~~~yd 369 (404)
+++++.+.. ...+.||.++.....|..+..+. +....+.++. .+ +..++.. ..++.+.+||
T Consensus 170 ~~~l~sgs~----D~~v~lwd~~~~~~~~~~~~~l~--------~H~~~V~~v~~sp~~~~~~~las~--s~D~~v~iWd 235 (297)
T 2pm7_B 170 SRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLE--------GHSDWVRDVAWSPTVLLRSYMASV--SQDRTCIIWT 235 (297)
T ss_dssp CCEEEEEET----TSCEEEEEEETTTTEEEEEEEEC--------CCSSCEEEEEECCCCSSSEEEEEE--ETTSCEEEEE
T ss_pred cceEEEEcC----CCcEEEEEEcCCCceEEEEEEec--------CCCCceEEEEECCCCCCceEEEEE--ECCCcEEEEE
Confidence 455555543 25788999887655676655553 2222333332 22 2443332 2356788999
Q ss_pred CCCC
Q 038464 370 LVTN 373 (404)
Q Consensus 370 ~~~~ 373 (404)
+++.
T Consensus 236 ~~~~ 239 (297)
T 2pm7_B 236 QDNE 239 (297)
T ss_dssp ESST
T ss_pred eCCC
Confidence 8764
No 127
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=30.55 E-value=2.6e+02 Score=24.04 Aligned_cols=136 Identities=9% Similarity=-0.002 Sum_probs=64.1
Q ss_pred eEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc--eeecccc-cccc-
Q 038464 125 KFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC--WEEETLL-LSRK- 200 (404)
Q Consensus 125 ~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~--W~~~~~~-~p~~- 200 (404)
.++++|+.+++....-... .-....++++ ++ +.++++.... ...+.+|+...+. =..+... .+..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~---~~~~p~gia~---d~---~g~l~v~d~~--~~~v~~~~~~g~~~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN---LFYLPHGLSI---DT---DGNYWVTDVA--LHQVFKLDPHSKEGPLLILGRSMQPGSD 138 (329)
T ss_dssp CEEEECTTTCCEEEEECTT---TCSSEEEEEE---CT---TSCEEEEETT--TTEEEEECTTCSSCCSEEESBTTBCCCS
T ss_pred cEEEEECCCCeEEeccCCC---ccCCceEEEE---CC---CCCEEEEECC--CCEEEEEeCCCCeEEEEEecccCCCCCC
Confidence 6899999988865321111 0011233432 32 3446665422 3578889886541 1111110 0000
Q ss_pred cc-cccccccCCc-ccc-CCeEEEeec--CCceeeecccCCCcccc----------------cceeeecCCceEEEEecc
Q 038464 201 SE-QALEVDSIDH-HDD-EDAVYFLSK--AGNVVATNMQRSPSKQY----------------SSVITSKDGEEIVYFLNS 259 (404)
Q Consensus 201 ~~-~~~~~~~~~~-v~~-~G~ly~~~~--~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~y~~~~ 259 (404)
.. ...|. .. +.- +|.+|+..+ ...+..+|........+ ...+......+.+|+...
T Consensus 139 ~~~~~~P~---~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 139 QNHFCQPT---DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp TTCCSSEE---EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred ccccCCCc---EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 00 00011 11 222 678887764 34445565432111111 122334333357888765
Q ss_pred -CCeEEEEecCCCcee
Q 038464 260 -CGTIVACNLTQKSFT 274 (404)
Q Consensus 260 -~~~i~~fD~~~~~w~ 274 (404)
.+.|..||+++.+..
T Consensus 216 ~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 216 ENGRIQCFKTDTKEFV 231 (329)
T ss_dssp TTTEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCcEE
Confidence 468999999865544
No 128
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=30.47 E-value=2.6e+02 Score=23.95 Aligned_cols=185 Identities=11% Similarity=0.023 Sum_probs=86.5
Q ss_pred CceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecc---------------cCce
Q 038464 114 GGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGE---------------LPKL 178 (404)
Q Consensus 114 ~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~---------------~~~~ 178 (404)
+|.|++....+.+.++|+.+++...+..............++ + ++ .+.++++.... ....
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~-~--d~--~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVT-V--DQ--RTGIVYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEE-E--CT--TTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEE-E--ec--CCCEEEEECCcccccccccceehcccCCCc
Confidence 688888765566889999887665543221000001112232 1 22 02346654311 1125
Q ss_pred EEEEEeCCCCceeecccccccccccccccccCCccccCCe-EEEeec-CCceeeecccCCC---cccc-----cceeeec
Q 038464 179 SFKVYNSCLNCWEEETLLLSRKSEQALEVDSIDHHDDEDA-VYFLSK-AGNVVATNMQRSP---SKQY-----SSVITSK 248 (404)
Q Consensus 179 ~~~vy~~~~~~W~~~~~~~p~~~~~~~~~~~~~~v~~~G~-ly~~~~-~~~~~~~~~~~~~---~~~~-----~~~~~~~ 248 (404)
.+.+||..++..+.....+.. +.. -.+.-+|. +|+... ...+..|+..... ...+ ...+..+
T Consensus 166 ~v~~~d~~~~~~~~~~~~~~~-p~g-------ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d 237 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLKELHV-PGG-------AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRN 237 (322)
T ss_dssp EEEEEETTTTEEEEEEEEESC-CCE-------EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEEC
T ss_pred eEEEEeCCCCEEEEeccCCcc-Ccc-------eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEEC
Confidence 688889887765544321111 110 01233554 665533 2345555544211 0111 1123332
Q ss_pred CCceEEEEeccC-----------CeEEEEecCCCceeeccccCCccc--cccceeEeeCCeEEEEEeeeccceeeEEEEE
Q 038464 249 DGEEIVYFLNSC-----------GTIVACNLTQKSFTEYPRLLPVFS--EYSIDVVECRGELLVVVLSEFLESASLRVWR 315 (404)
Q Consensus 249 ~~~~~~y~~~~~-----------~~i~~fD~~~~~w~~i~~~~p~~~--~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~ 315 (404)
.++.+|+.... ..|..||+..+....+.. |... ..-..++..+|+||+.... ...+.++.
T Consensus 238 -~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~--~~g~~~~~~~~~~~~~g~L~v~~~~----~~~i~~~~ 310 (322)
T 2fp8_A 238 -ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL--PPPFAGEHFEQIQEHDGLLYIGTLF----HGSVGILV 310 (322)
T ss_dssp -TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC--CTTTTTSCCCEEEEETTEEEEECSS----CSEEEEEE
T ss_pred -CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC--CCCCccccceEEEEeCCEEEEeecC----CCceEEEe
Confidence 23457776532 468999987665555532 2211 1112344568899976432 23444554
Q ss_pred EeC
Q 038464 316 FDQ 318 (404)
Q Consensus 316 l~~ 318 (404)
++.
T Consensus 311 ~~~ 313 (322)
T 2fp8_A 311 YDK 313 (322)
T ss_dssp C--
T ss_pred ccc
Confidence 443
No 129
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=30.46 E-value=2.1e+02 Score=27.82 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=36.5
Q ss_pred ccccCCeEEEeec-CCceeeecc-cCCCcc-cc-----------------cceeee--cCC--ceEEEEeccCCeEEEEe
Q 038464 212 HHDDEDAVYFLSK-AGNVVATNM-QRSPSK-QY-----------------SSVITS--KDG--EEIVYFLNSCGTIVACN 267 (404)
Q Consensus 212 ~v~~~G~ly~~~~-~~~~~~~~~-~~~~~~-~~-----------------~~~~~~--~~~--~~~~y~~~~~~~i~~fD 267 (404)
++..+|.+|+.+. .+.+.++|. ..+... .+ ...+.. .+| ..++|+......+.++|
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlD 137 (599)
T 1w6s_A 58 PLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALN 137 (599)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEE
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEE
Confidence 4667788877766 566777776 221100 00 011122 222 12378877778999999
Q ss_pred cCCCc--eee
Q 038464 268 LTQKS--FTE 275 (404)
Q Consensus 268 ~~~~~--w~~ 275 (404)
.++.+ |+.
T Consensus 138 a~TG~~~W~~ 147 (599)
T 1w6s_A 138 AETGETVWKV 147 (599)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCCEEEee
Confidence 87655 874
No 130
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=30.43 E-value=2.8e+02 Score=24.42 Aligned_cols=59 Identities=15% Similarity=0.096 Sum_probs=32.3
Q ss_pred EEEEeccCCeEEEEecCCCce--eeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeC
Q 038464 253 IVYFLNSCGTIVACNLTQKSF--TEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQ 318 (404)
Q Consensus 253 ~~y~~~~~~~i~~fD~~~~~w--~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~ 318 (404)
.++.....+.|..||+.+..- ..+.. . ....-..+...+|++++.++. ...+.+|.+..
T Consensus 305 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~l~s~~~----d~~v~iw~~~~ 365 (420)
T 3vl1_A 305 YIYAGYENGMLAQWDLRSPECPVGEFLI--N-EGTPINNVYFAAGALFVSSGF----DTSIKLDIISD 365 (420)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEEE--S-TTSCEEEEEEETTEEEEEETT----TEEEEEEEECC
T ss_pred EEEEEeCCCeEEEEEcCCCcCchhhhhc--c-CCCCceEEEeCCCCEEEEecC----CccEEEEeccC
Confidence 555555567889999887532 22210 0 110111234447776665543 35788998877
No 131
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=30.20 E-value=31 Score=31.11 Aligned_cols=13 Identities=8% Similarity=-0.005 Sum_probs=6.0
Q ss_pred ccccCCeEEEeec
Q 038464 212 HHDDEDAVYFLSK 224 (404)
Q Consensus 212 ~v~~~G~ly~~~~ 224 (404)
++..+|.+|+-+.
T Consensus 5 P~v~~~~v~~gs~ 17 (369)
T 2hz6_A 5 VTLPETLLFVSTL 17 (369)
T ss_dssp ---CTTEEEEEET
T ss_pred CeeeCCEEEEEcC
Confidence 4556677765443
No 132
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=29.44 E-value=2.7e+02 Score=23.78 Aligned_cols=68 Identities=7% Similarity=-0.052 Sum_probs=32.0
Q ss_pred ceEEEEe-CCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceee
Q 038464 115 GLVCFRT-ASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEE 192 (404)
Q Consensus 115 Glv~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~ 192 (404)
|-.++.+ ....+.+||..+........... ......++++ .+ +.+.++.++. ...+.+||..++.-..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~---~~---~~~~l~s~~~--dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQM--HTGPVLDVCW---SD---DGSKVFTASC--DKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEE--CSSCEEEEEE---CT---TSSEEEEEET--TSEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEecc--ccCCEEEEEE---Cc---CCCEEEEEcC--CCcEEEEEcCCCCcee
Confidence 3444444 36778999988733221111110 1111222322 22 2223333332 3579999998876443
No 133
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=28.68 E-value=2.7e+02 Score=23.66 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=48.0
Q ss_pred eEEEEecCCCceeeccccCCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccC
Q 038464 262 TIVACNLTQKSFTEYPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGK 340 (404)
Q Consensus 262 ~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~ 340 (404)
.|..||++.+.-..+. .+. .-..++. -+|+||+..... ....|+.++..+.+.+++..++.. .
T Consensus 54 ~I~~~d~~g~~~~~~~--~~~---~p~gia~~~dG~l~vad~~~----~~~~v~~~d~~~g~~~~~~~~~~~-------~ 117 (306)
T 2p4o_A 54 EIVSITPDGNQQIHAT--VEG---KVSGLAFTSNGDLVATGWNA----DSIPVVSLVKSDGTVETLLTLPDA-------I 117 (306)
T ss_dssp EEEEECTTCCEEEEEE--CSS---EEEEEEECTTSCEEEEEECT----TSCEEEEEECTTSCEEEEEECTTC-------S
T ss_pred eEEEECCCCceEEEEe--CCC---CceeEEEcCCCcEEEEeccC----CcceEEEEcCCCCeEEEEEeCCCc-------c
Confidence 6788887764322111 111 1123443 378888765321 123477777766677776665421 1
Q ss_pred cceEEEEecCCEEEEEEecCCCceEEEEECCCC
Q 038464 341 KVDINCVAAGHQIFICFNSAELFSYVLCDLVTN 373 (404)
Q Consensus 341 ~~~~~~~~~~~~i~v~~~~~~~~~~~~yd~~~~ 373 (404)
...-.+...++.+|+. ....+.++++|..++
T Consensus 118 ~~~g~~~~~~~~~~v~--d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTA--DSYRGAIWLIDVVQP 148 (306)
T ss_dssp CEEEEEESSSSEEEEE--ETTTTEEEEEETTTT
T ss_pred ccCcccccCCCcEEEE--ECCCCeEEEEeCCCC
Confidence 1111122345566543 223467888888764
No 134
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=28.37 E-value=4.3e+02 Score=25.84 Aligned_cols=26 Identities=4% Similarity=0.008 Sum_probs=14.2
Q ss_pred eEEEEEecccCceEEEEEeCCCC--ceeecc
Q 038464 166 YKLVLVYGELPKLSFKVYNSCLN--CWEEET 194 (404)
Q Consensus 166 ~kv~~~~g~~~~~~~~vy~~~~~--~W~~~~ 194 (404)
.+||+... ...+..+|..++ .|+.-.
T Consensus 67 g~vyv~~~---~~~v~AlD~~tG~~~W~~~~ 94 (668)
T 1kv9_A 67 GVIYTSMS---WSRVIAVDAASGKELWRYDP 94 (668)
T ss_dssp TEEEEEEG---GGEEEEEETTTCCEEEEECC
T ss_pred CEEEEECC---CCeEEEEECCCChhceEECC
Confidence 45555432 235666776554 487543
No 135
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=27.06 E-value=2.4e+02 Score=24.29 Aligned_cols=87 Identities=13% Similarity=0.235 Sum_probs=0.0
Q ss_pred CCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEE--ecCCEEEEEEecCCCceEEEEECC
Q 038464 294 RGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCV--AAGHQIFICFNSAELFSYVLCDLV 371 (404)
Q Consensus 294 ~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~~~~~~~~~~~~yd~~ 371 (404)
+|++++.+..+ ..+.||.++.....+..+..+. +....+.++ ..++..++.... ++.+-+||..
T Consensus 118 ~g~~las~s~D----~~v~iwd~~~~~~~~~~~~~~~--------~h~~~v~~v~~~p~~~~l~s~s~--D~~i~iW~~~ 183 (330)
T 2hes_X 118 DGYYLATCSRD----KSVWIWETDESGEEYECISVLQ--------EHSQDVKHVIWHPSEALLASSSY--DDTVRIWKDY 183 (330)
T ss_dssp TSCEEEEEETT----SCEEEEECCTTCCCCEEEEEEC--------CCSSCEEEEEECSSSSEEEEEET--TSCEEEEEEE
T ss_pred CCCEEEEEeCC----CEEEEEeccCCCCCeEEEEEec--------cCCCceEEEEECCCCCEEEEEcC--CCeEEEEECC
Q ss_pred CCceEECCCCC-CCCceeEeeEeeeecc
Q 038464 372 TNEWVELPKCS-MNGEAVVFMSAFSFEP 398 (404)
Q Consensus 372 ~~~w~~~~~~~-~~~~~~~~~~~~~~~p 398 (404)
++.|+.+..+. ..+. +.++.|.|
T Consensus 184 ~~~~~~~~~~~~h~~~----v~~~~~~~ 207 (330)
T 2hes_X 184 DDDWECVAVLNGHEGT----VWSSDFDK 207 (330)
T ss_dssp TTEEEEEEEECCCSSC----EEEEEECC
T ss_pred CCCeeEEEEccCCCCc----EEEEEecC
No 136
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.84 E-value=2.3e+02 Score=25.17 Aligned_cols=24 Identities=8% Similarity=0.120 Sum_probs=16.4
Q ss_pred CceEEEEeCCCeEEEEcCCCCC--ee
Q 038464 114 GGLVCFRTASGKFIVSNPVTGS--SR 137 (404)
Q Consensus 114 ~Glv~~~~~~~~~~v~NP~t~~--w~ 137 (404)
+|+|++......++.+|..||+ |+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~ 35 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWS 35 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4566666556677778888876 55
No 137
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=25.72 E-value=3.1e+02 Score=23.32 Aligned_cols=65 Identities=11% Similarity=0.135 Sum_probs=35.4
Q ss_pred Cc-eEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCc
Q 038464 114 GG-LVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNC 189 (404)
Q Consensus 114 ~G-lv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~ 189 (404)
+| +++.......+.+||..+++...+... .....++.+.. . .+.+.++.++. ...+.+||..++.
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~-~---~~~~~l~~~~~--dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIK-A---PNYSCVMTGSW--DKTLKFWDTRSSN 162 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEEC-----SSCEEEEEEEE-C---SSCEEEEEEET--TSEEEEECSSCSS
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccc-----cCceEEEEEEe-C---CCCCEEEEccC--CCcEEEEECCCCc
Confidence 44 444444467899999998886654321 12223333321 1 13444444432 3579999987754
No 138
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=25.24 E-value=2e+02 Score=26.96 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=32.0
Q ss_pred eeEEEEEEeCCCCCeEEeccC-ChhHHHHhccCcc--eEEEEecCCEEEEEEecC----CCceEEEEECCCCce
Q 038464 309 ASLRVWRFDQDNGFWHQIAAM-PPAMSHEFYGKKV--DINCVAAGHQIFICFNSA----ELFSYVLCDLVTNEW 375 (404)
Q Consensus 309 ~~~~vw~l~~~~~~W~~v~~~-~~~~~~~~~~~~~--~~~~~~~~~~i~v~~~~~----~~~~~~~yd~~~~~w 375 (404)
..+.|..+.....+=+.+..+ |.++..+. +... .+.| ..++ |||...+. ..+.++++|.++.+.
T Consensus 106 ~~I~viD~~t~p~~p~~~k~ie~~~~~~~~-g~s~Ph~~~~-~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 106 SRIYIIDTKPNPREPKIIKVIEPEEVKKVS-GYSRLHTVHC-GPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp CCEEEEECCSCTTSCEEEEEECHHHHHHHH-CEEEEEEEEE-CSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred CeEEEEECCCCCCCceeeeeechhhccccc-CCCcccceeE-CCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 444444333233343445555 34444332 3211 2333 3344 88754332 247899999998654
No 139
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=25.06 E-value=4.9e+02 Score=25.39 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=50.7
Q ss_pred eEEEEecCCC---ceeeccccCCccccccceeEee-CCeEEEEEeeeccceeeEEEEEEeCCCCC-eEEeccCChhHHHH
Q 038464 262 TIVACNLTQK---SFTEYPRLLPVFSEYSIDVVEC-RGELLVVVLSEFLESASLRVWRFDQDNGF-WHQIAAMPPAMSHE 336 (404)
Q Consensus 262 ~i~~fD~~~~---~w~~i~~~~p~~~~~~~~lv~~-~g~L~~v~~~~~~~~~~~~vw~l~~~~~~-W~~v~~~~~~~~~~ 336 (404)
.|..+|+.+. .|..+-...+... -..+... +++|++....+ ....||.++..+++ ...+. .+
T Consensus 312 ~l~~~d~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~lv~~~~~~----g~~~l~~~~~~~g~~~~~l~-~~------ 378 (710)
T 2xdw_A 312 RLINIDFTDPEESKWKVLVPEHEKDV--LEWVACVRSNFLVLCYLHD----VKNTLQLHDLATGALLKIFP-LE------ 378 (710)
T ss_dssp EEEEEETTSCCGGGCEEEECCCSSCE--EEEEEEETTTEEEEEEEET----TEEEEEEEETTTCCEEEEEC-CC------
T ss_pred EEEEEeCCCCCcccceeccCCCCCCe--EEEEEEEcCCEEEEEEEEC----CEEEEEEEECCCCCEEEecC-CC------
Confidence 5888888764 4776622111101 0123334 67777655432 23447777763333 22322 22
Q ss_pred hccCcceEEEEe---cCCEEEEEEec-CCCceEEEEECCCCc--eEEC
Q 038464 337 FYGKKVDINCVA---AGHQIFICFNS-AELFSYVLCDLVTNE--WVEL 378 (404)
Q Consensus 337 ~~~~~~~~~~~~---~~~~i~v~~~~-~~~~~~~~yd~~~~~--w~~~ 378 (404)
...+..++ .++.+++...+ ..+..++.||+.+++ .+.+
T Consensus 379 ----~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 379 ----VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp ----SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred ----CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 11122222 34566655444 345789999998877 5543
No 140
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=23.76 E-value=5.3e+02 Score=25.31 Aligned_cols=11 Identities=36% Similarity=0.253 Sum_probs=8.8
Q ss_pred eEEEEECCCCc
Q 038464 364 SYVLCDLVTNE 374 (404)
Q Consensus 364 ~~~~yd~~~~~ 374 (404)
.++++|.++++
T Consensus 276 ~v~AlD~~TG~ 286 (689)
T 1yiq_A 276 SIVAVNADTGE 286 (689)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEEccCCc
Confidence 48889998875
No 141
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=23.47 E-value=3.4e+02 Score=23.02 Aligned_cols=64 Identities=6% Similarity=0.103 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCceeecc
Q 038464 123 SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCWEEET 194 (404)
Q Consensus 123 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W~~~~ 194 (404)
...+.+||..+++...+..+.- ......++++ .+.. ..++++.++. ...+.+||..++.|....
T Consensus 34 D~~v~lwd~~~~~~~~~~~l~g--H~~~V~~v~~---~~~~-~~~~l~s~s~--D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 34 DRSVKIFDVRNGGQILIADLRG--HEGPVWQVAW---AHPM-YGNILASCSY--DRKVIIWREENGTWEKSH 97 (316)
T ss_dssp TTEEEEEEEETTEEEEEEEEEC--CSSCEEEEEE---CCGG-GSSCEEEEET--TSCEEEECCSSSCCCEEE
T ss_pred CCeEEEEEecCCCcEEEEEEcC--CCccEEEEEe---CCCC-CCCEEEEEEC--CCEEEEEECCCCcceEEE
Confidence 5567888887765432222210 1112223322 1110 1223443332 356899999888776544
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=23.36 E-value=3e+02 Score=22.35 Aligned_cols=103 Identities=10% Similarity=0.001 Sum_probs=49.5
Q ss_pred CeEEEEecCCCceeeccccCCccccccceeEe-eCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhcc
Q 038464 261 GTIVACNLTQKSFTEYPRLLPVFSEYSIDVVE-CRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYG 339 (404)
Q Consensus 261 ~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~-~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~ 339 (404)
..|..+|..+..-..+.... . ...+.. -+|+..++.... ...+.||.++..+....++...+.
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~---~--~~~~~~spdg~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~-------- 173 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNL---P--SYWHGWSPDGKSFTYCGIR---DQVFDIYSMDIDSGVETRLTHGEG-------- 173 (297)
T ss_dssp CEEEEEETTCCCCEECCSSS---S--EEEEEECTTSSEEEEEEEE---TTEEEEEEEETTTCCEEECCCSSS--------
T ss_pred ceEEEEECCCCceEEeecCC---C--ccceEECCCCCEEEEEECC---CCceEEEEEECCCCcceEcccCCC--------
Confidence 47778887766544442111 1 111222 256544433322 245789999876555555443321
Q ss_pred CcceEEEEe-cCCEEEEEEecCCCceEEEEECCCCceEECCC
Q 038464 340 KKVDINCVA-AGHQIFICFNSAELFSYVLCDLVTNEWVELPK 380 (404)
Q Consensus 340 ~~~~~~~~~-~~~~i~v~~~~~~~~~~~~yd~~~~~w~~~~~ 380 (404)
.... .... .+..+++.........++.+++.++..+.+..
T Consensus 174 ~~~~-~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 174 RNDG-PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp CEEE-EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred cccc-ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 0111 1223 34445433222334556666766766666543
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=23.35 E-value=4.7e+02 Score=24.64 Aligned_cols=63 Identities=11% Similarity=0.039 Sum_probs=36.8
Q ss_pred ecCceEEEEeC-CCeEEEEcCCCCCee-eCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeC--CC
Q 038464 112 ASGGLVCFRTA-SGKFIVSNPVTGSSR-ELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNS--CL 187 (404)
Q Consensus 112 s~~Glv~~~~~-~~~~~v~NP~t~~w~-~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~--~~ 187 (404)
+-+|.+++.+. .+.+.+||+.|++.. .++.-. . .+++++ ++ +.-.+++.+.+ ..+.+||. .+
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~----~--~~~v~~---sp--dg~~l~v~~~d---~~V~v~D~~~~t 211 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY----A--VHISRM---SA--SGRYLLVIGRD---ARIDMIDLWAKE 211 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST----T--EEEEEE---CT--TSCEEEEEETT---SEEEEEETTSSS
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc----c--cceEEE---CC--CCCEEEEECCC---CeEEEEECcCCC
Confidence 34677777765 668999999998754 333111 1 233322 22 23345554332 68999999 55
Q ss_pred C
Q 038464 188 N 188 (404)
Q Consensus 188 ~ 188 (404)
+
T Consensus 212 ~ 212 (543)
T 1nir_A 212 P 212 (543)
T ss_dssp C
T ss_pred C
Confidence 4
No 144
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.09 E-value=5.3e+02 Score=24.70 Aligned_cols=123 Identities=12% Similarity=0.036 Sum_probs=0.0
Q ss_pred CccccCCeEEEeecCCceeeecccCCCcccccceeeecCCceEEEEeccCCeEEEEecCCCc--eeeccccCCccc----
Q 038464 211 DHHDDEDAVYFLSKAGNVVATNMQRSPSKQYSSVITSKDGEEIVYFLNSCGTIVACNLTQKS--FTEYPRLLPVFS---- 284 (404)
Q Consensus 211 ~~v~~~G~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~i~~fD~~~~~--w~~i~~~~p~~~---- 284 (404)
.++..+|.+|+.+... .+.++|.++.+ |+.-........
T Consensus 63 ~P~v~~g~vyv~~~~~-----------------------------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~ 107 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-----------------------------------RLFALDAKTGKRLWTYNHRLPDDIRPCCD 107 (582)
T ss_dssp CCEEETTEEEEEETTT-----------------------------------EEEEEESSSCCEEEEEECCCCTTCCCSSC
T ss_pred ccEEECCEEEEEcCCC-----------------------------------CEEEEECCCCcEEEEEcCCCCcccccccc
Q ss_pred cccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCChhHHHHhccCcceEEEEec--CCEEEEEEecC--
Q 038464 285 EYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPPAMSHEFYGKKVDINCVAA--GHQIFICFNSA-- 360 (404)
Q Consensus 285 ~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~~~~~-- 360 (404)
.....++..+|+||+..... .+..+..+..+..|..-..-+...+ .......++.. +++..|++...
T Consensus 108 ~~~~g~a~~~~~v~~~t~dg-----~l~AlD~~TG~~~W~~~~~~~~~~~----~~~~sP~v~~~~~~G~~~v~vg~~~~ 178 (582)
T 1flg_A 108 VVNRGAAIYGDKVFFGTLDA-----SVVALNKNTGKVVWKKKFADHGAGY----TMTGAPTIVKDGKTGKVLLIHGSSGD 178 (582)
T ss_dssp SCCCCCEEETTEEEEEETTT-----EEEEEESSSCCEEEEEECSCGGGTC----BCCSCCEEEECTTTCCEEEEECCBCG
T ss_pred cCCCccEEECCEEEEEeCCC-----EEEEEECCCCCEEeeecCCCCCcCc----ccccCCEEeCCCcCCcEEEEEecccc
Q ss_pred ---CCceEEEEECCCCceEE
Q 038464 361 ---ELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 361 ---~~~~~~~yd~~~~~w~~ 377 (404)
..+.+.+||.++++-.+
T Consensus 179 e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 179 EFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp GGCCBCEEEEECTTTCCEEE
T ss_pred ccCCCCEEEEEECCCCCEEe
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=21.84 E-value=3.6e+02 Score=22.74 Aligned_cols=192 Identities=10% Similarity=0.023 Sum_probs=0.0
Q ss_pred ecCceEEEEeC-CCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEecccCceEEEEEeCCCCce
Q 038464 112 ASGGLVCFRTA-SGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVYGELPKLSFKVYNSCLNCW 190 (404)
Q Consensus 112 s~~Glv~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~g~~~~~~~~vy~~~~~~W 190 (404)
+.++.+++... ...+.++|+.+++....-+.+ .......+++. ++.-.+++.... ...+.+||..++.-
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s-----~dg~~~~v~~~~--~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---DKFGPGTAMMA-----PDNRTAYVLNNH--YGDIYGIDLDTCKN 77 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEECS---SCCSSCEEEEC-----TTSSEEEEEETT--TTEEEEEETTTTEE
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC---CCCCCceeEEC-----CCCCEEEEEeCC--CCcEEEEeCCCCcE
Q ss_pred eecccccccc-------cccccccccCCccccCCeEEEeecCC------------ceeeecccCCCcccccceeeecCCc
Q 038464 191 EEETLLLSRK-------SEQALEVDSIDHHDDEDAVYFLSKAG------------NVVATNMQRSPSKQYSSVITSKDGE 251 (404)
Q Consensus 191 ~~~~~~~p~~-------~~~~~~~~~~~~v~~~G~ly~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (404)
...-. .+.. +.. -.+.-+|...+++... +
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~-------~~~spdg~~l~~~~~~~~~~~~~~~~~~~------------------------ 125 (349)
T 1jmx_B 78 TFHAN-LSSVPGEVGRSMYS-------FAISPDGKEVYATVNPTQRLNDHYVVKPP------------------------ 125 (349)
T ss_dssp EEEEE-SCCSTTEEEECSSC-------EEECTTSSEEEEEEEEEEECSSCEEECCC------------------------
T ss_pred EEEEE-cccccccccccccc-------eEECCCCCEEEEEcccccccccccccCCC------------------------
Q ss_pred eEEEEeccCCeEEEEecCCCceeeccccCCccccccceeEeeCCeEEEEEeeeccceeeEEEEEEeCCCCCeEEeccCCh
Q 038464 252 EIVYFLNSCGTIVACNLTQKSFTEYPRLLPVFSEYSIDVVECRGELLVVVLSEFLESASLRVWRFDQDNGFWHQIAAMPP 331 (404)
Q Consensus 252 ~~~y~~~~~~~i~~fD~~~~~w~~i~~~~p~~~~~~~~lv~~~g~L~~v~~~~~~~~~~~~vw~l~~~~~~W~~v~~~~~ 331 (404)
.|..||+++..-...-...+.......-...-+|+ .++...+ |+.++..+.+-.+.....
T Consensus 126 ----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~~--------i~~~d~~~~~~~~~~~~~- 185 (349)
T 1jmx_B 126 ----------RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGPD--------IYKMDVKTGKYTVALPLR- 185 (349)
T ss_dssp ----------EEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESSS--------EEEECTTTCCEEEEECST-
T ss_pred ----------eEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccCc--------EEEEeCCCCceecccccc-
Q ss_pred hHHHHhcc---------------------------------------------------------------------Ccc
Q 038464 332 AMSHEFYG---------------------------------------------------------------------KKV 342 (404)
Q Consensus 332 ~~~~~~~~---------------------------------------------------------------------~~~ 342 (404)
. .-.
T Consensus 186 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (349)
T 1jmx_B 186 -------NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYF 258 (349)
T ss_dssp -------TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred -------ccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcce
Q ss_pred eEEEEe-cCCEEEEEEecCCCceEEEEECCCCceEE
Q 038464 343 DINCVA-AGHQIFICFNSAELFSYVLCDLVTNEWVE 377 (404)
Q Consensus 343 ~~~~~~-~~~~i~v~~~~~~~~~~~~yd~~~~~w~~ 377 (404)
.+.... .++.+|+. .+.+.+||+++++...
T Consensus 259 ~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 259 TGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEECSSCTTEEEEE-----ESEEEEEETTTTEEEE
T ss_pred eeEecCCCCCEEEEE-----cCeEEEEECccCeEEE
No 146
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=21.78 E-value=1.7e+02 Score=23.02 Aligned_cols=40 Identities=8% Similarity=0.068 Sum_probs=25.6
Q ss_pred CeEEEEcCCCC-CeeeCCCCCCCCCCCceeEEEEEecCCCCCceEEEEEe
Q 038464 124 GKFIVSNPVTG-SSRELPPLDADTENQSLHAIVMTTSSKNPSNYKLVLVY 172 (404)
Q Consensus 124 ~~~~v~NP~t~-~w~~lP~~~~~~~~~~~~~~~~~g~~~~~~~~kv~~~~ 172 (404)
.+++++||.|+ .|.....-. ..+.++ ++...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~--------~~V~i~-~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA--------VTVSYF-YDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC--------EEEEEE-EETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC--------eEEEEE-EcCCCCEEEEEEcc
Confidence 36889999997 897544322 123233 46666679998764
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=20.68 E-value=3.9e+02 Score=22.63 Aligned_cols=100 Identities=11% Similarity=0.093 Sum_probs=49.2
Q ss_pred eeeeecCCCcee-eccCCCCCCCeeEEEecCceEEEEeCCCeEEEEcCCCCCeeeCCCCCCCCCCCceeEEEEEecCCCC
Q 038464 85 SIVFDSAEKTWK-ELNFPNSSPDSIPVAASGGLVCFRTASGKFIVSNPVTGSSRELPPLDADTENQSLHAIVMTTSSKNP 163 (404)
Q Consensus 85 ~~~~d~~~~~w~-~l~~p~~~~~~~~~~s~~Glv~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~g~~~~~ 163 (404)
...+|..+.+.. .++..........+...+..+++......+.++|+.+++-...-............++++ ++.
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d- 241 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL---DTA- 241 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE---ETT-
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE---CCC-
Confidence 456676655332 333111111122244455667776667789999999987543222211001111222322 222
Q ss_pred CceEEEEEecccCceEEEEEeCCCCcee
Q 038464 164 SNYKLVLVYGELPKLSFKVYNSCLNCWE 191 (404)
Q Consensus 164 ~~~kv~~~~g~~~~~~~~vy~~~~~~W~ 191 (404)
.-.+++... ....+.+||..++.-.
T Consensus 242 -g~~l~~~~~--~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 242 -RQRAFITDS--KAAEVLVVDTRNGNIL 266 (353)
T ss_dssp -TTEEEEEES--SSSEEEEEETTTCCEE
T ss_pred -CCEEEEEeC--CCCEEEEEECCCCcEE
Confidence 233454432 2367899999876643
No 148
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=20.46 E-value=3.7e+02 Score=22.35 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=37.8
Q ss_pred eEEEEeccCCeEEEEecCCCceeec-cccCCcc-ccccceeEe-eCCeEEEEEeeec---------cceeeEEEEEEeCC
Q 038464 252 EIVYFLNSCGTIVACNLTQKSFTEY-PRLLPVF-SEYSIDVVE-CRGELLVVVLSEF---------LESASLRVWRFDQD 319 (404)
Q Consensus 252 ~~~y~~~~~~~i~~fD~~~~~w~~i-~~~~p~~-~~~~~~lv~-~~g~L~~v~~~~~---------~~~~~~~vw~l~~~ 319 (404)
+.+|+....+.|..||.+ .+...+ ....... ...-..++. -+|+|++...... .......||.++..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 467777665689999998 665544 2111110 101123333 3788887653210 00112468888875
Q ss_pred CCCeEEe
Q 038464 320 NGFWHQI 326 (404)
Q Consensus 320 ~~~W~~v 326 (404)
.+...+
T Consensus 162 -g~~~~~ 167 (314)
T 1pjx_A 162 -GQMIQV 167 (314)
T ss_dssp -SCEEEE
T ss_pred -CCEEEe
Confidence 444443
Done!